BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 011378
         (487 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/487 (74%), Positives = 428/487 (87%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNALCKD K D  K FL EME  G+Y D VTYNTLI AYCREG LEEAF++MNSM+ KG
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP +FTYN++INGLCKKGR  RAK +L EML +GLSPDT TYNTLLVESCR++N SEA+
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK 243

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF EM R+GV PD+VSFS+LI +FSRN  LD+AL+YFR+MK  GLVPDNV+YT++++GY
Sbjct: 244 EIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY 303

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG +LEALK+RDEMLE+GCV+DV+ YNTILNGLC+ KMLT+AD LF+EM+ERG  PDF
Sbjct: 304 CRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDF 363

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTFTTLIHGHC+DGNM KAL+LF  MTQ++IKPDIV YNTLIDGFCKVGEMEKA++LW  
Sbjct: 364 YTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDG 423

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MISRKI PN+I+YGILIN YCS+GHV+EAFRLW  M+ KGIKPTLV+CNT+IKGYCRSGD
Sbjct: 424 MISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGD 483

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           +SKADEFL +M+++GV PD ISYNTLINGFVRE+NMDKAF  ++KME +GL+PD+ITYNV
Sbjct: 484 SSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNV 543

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFCRQGRM ++EL+L +MIEKG+NPDRSTYT LINGHV+Q+NL EAFRFHDEMLQRG
Sbjct: 544 VMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRG 603

Query: 481 FVPDDAF 487
           F PDD F
Sbjct: 604 FAPDDVF 610



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 247/491 (50%), Gaps = 35/491 (7%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           + + ++ LI  Y +   L E  +    +  KG    +   NSL+ GL K    + A EV 
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            E+++ G+  +  T N ++   C+     + +    EM   G+  D+V+++TLIG + R 
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L+ A      M   GL P    Y  IING C+ G    A  +  EML  G   D  TY
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           NT+L   CR    +EA ++F EML +GV PD  +F++LI    ++ ++++AL  F  M +
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PD V Y  L+ G+C+ G M +A K+  +M+ +    + I+Y  ++NG C    +T+
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A +L+ EMV +G  P   +  T+I G+C+ G+ +KA      M    + PD ++YNTLI+
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406

Query: 389 GFVREENMDK-----------------------------------AFALVSKMENQGLVP 413
           GF +   M+K                                   AF L   M  +G+ P
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKP 466

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
            ++T N ++ G+CR G    ++  L RMI KG+ PD  +Y TLING V ++N+ +AF + 
Sbjct: 467 TLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWI 526

Query: 474 DEMLQRGFVPD 484
           ++M + G +PD
Sbjct: 527 NKMEKEGLLPD 537



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 151/285 (52%), Gaps = 2/285 (0%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  + + ++ ++    +A+ L E  + F  +  +G         +L+ G  K   +  A 
Sbjct: 44  CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            +   + +  I+ ++ T N +++  CK G+ +      ++M    I  + ++Y  LI  Y
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + EAF +   M  KG+KP+L + N II G C+ G  ++A   L +M++ G+ PD+
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YNTL+    R +N  +A  +  +M  QG+VPD+++++ ++  F R  R  D  L+ +R
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRN-RHLDQALVYFR 282

Query: 441 MIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++K GL PD   YT L++G+    N+ EA +  DEML++G V D
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 327



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 121/245 (49%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            F  LI  + +   + +    F I+  K     I   N+L+ G  K+  +E A ++  ++
Sbjct: 50  VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +   I  N  +  I++N  C  G   +      EM G GI   +V+ NT+I  YCR G  
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLL 169

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A E ++ M  +G+ P   +YN +ING  ++    +A  ++ +M N GL PD  TYN +
Sbjct: 170 EEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L   CR+    +++ I   M+ +G+ PD  ++++LI       +L +A  +  +M + G 
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289

Query: 482 VPDDA 486
           VPD+ 
Sbjct: 290 VPDNV 294


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/487 (75%), Positives = 431/487 (88%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNALCKDHKID  K FL +MEQKG++ D VTYNTLINAYCREG L EAF++MNSMSGKG
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP +FTYN++INGLCKKGR  RAK V +EML +GLSPDT TYNTLLVESCR  N  EA+
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF +M  RGV+PD++SFS+LIG+ SRNG LD+ALMYFR+MK++GLVPDNV+YTI+INGY
Sbjct: 311 DIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGY 370

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG + EAL++RD+MLE+GC +DVV YNTILNGLC+ K+L +A+ LF+EM+ERGV PDF
Sbjct: 371 CRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDF 430

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFTTLIHGHCK+GNM KAL+LF IMTQK+IKPDIVTYN LIDGFCK  EMEKAN+LW +
Sbjct: 431 CTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNE 490

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MISRKI PN+ISY IL+NGYC++G V+EAFRLW EM+ KGIKPTLV+CNT+IKGYCRSGD
Sbjct: 491 MISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGD 550

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            SKADEFL KM+SEGV PDSI+YNTLINGFV+ E MDKAF L++KME +GL PDV+TYNV
Sbjct: 551 LSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNV 610

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL GFCRQGRM ++ELIL +MIE+G++PDRSTYTTLING+VSQ+NLKEAFRFHDEMLQRG
Sbjct: 611 ILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRG 670

Query: 481 FVPDDAF 487
           FVPDD F
Sbjct: 671 FVPDDDF 677



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 176/371 (47%), Gaps = 42/371 (11%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIII--NGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           +++ L+  R ++S  L     L   +I  +G  R   V   + M        C +D + +
Sbjct: 64  VEKILLNLRRVRSKRLSDAQTLILRMIRRSGVSRVEIVESLISM-----SSTCGVDNLVF 118

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           + ++    +A+ L E  D F  +  +G         +L+ G  K G ++ A  +++ + +
Sbjct: 119 DLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIAR 178

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             I+ ++ T N +++  CK  +++       DM  + I  + ++Y  LIN YC  G + E
Sbjct: 179 SGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGE 238

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI- 387
           AF +   M GKG+KPTL + N +I G C+ G   +A    ++M+S G+ PD+ +YNTL+ 
Sbjct: 239 AFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLV 298

Query: 388 -----NGFV-----------------------------REENMDKAFALVSKMENQGLVP 413
                N F+                             R  ++D+A      M+  GLVP
Sbjct: 299 ESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVP 358

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D + Y +++ G+CR G M ++  I  +M+E+G   D   Y T++NG   +  L +A    
Sbjct: 359 DNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALF 418

Query: 474 DEMLQRGFVPD 484
           DEM++RG VPD
Sbjct: 419 DEMVERGVVPD 429



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 136/288 (47%), Gaps = 17/288 (5%)

Query: 217 RAKMLTEADDLFNEMLERGVFP-----------------DFYTFTTLIHGHCKDGNMNKA 259
           R+K L++A  L   M+ R                     D   F  LI  + +   +N+ 
Sbjct: 75  RSKRLSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEG 134

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            + F I+ +K     I   N+L+ G  K+G ++ A +++ ++    I  N  +  I++N 
Sbjct: 135 TDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNA 194

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C    + +      +M  KGI   +V+ NT+I  YCR G   +A E ++ M  +G+ P 
Sbjct: 195 LCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPT 254

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN +ING  ++    +A  + ++M + GL PD  TYN +L   CR     +++ I  
Sbjct: 255 LFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFS 314

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            M+ +G++PD  ++++LI       +L +A  +  +M   G VPD+  
Sbjct: 315 DMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVI 362


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/487 (73%), Positives = 431/487 (88%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+NALCK+ KI++ K FL +ME+KGV+PD VTYNTLINAYCR+G LEEAF+LM+SMSGKG
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP VFTYN++INGLCK G+  RAK VLDEML++G+SPDTATYN LLVE CR +NM +AE
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF EM  +GV PD+VSFS LIG+ S+NG LD+AL YFR+MK+AGL PDNV+YTI+I G+
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG + EALK+RDEMLE+GCV+DVVTYNTILNGLC+ KML+EAD+LF EM ERGVFPDF
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTFTTLI+G+ KDGNMNKA+ LF++M Q+++KPD+VTYNTLIDGFCK  EMEK N+LW D
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MISR+I PN+ISYGILINGYC+MG V+EAFRLW EMV KG + T+++CNTI+KGYCR+G+
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A KADEFLS M+ +G+ PD I+YNTLINGF++EENMD+AFALV+KMEN GL+PDVITYNV
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 679

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL GF RQGRM ++ELI+ +MIE+G+NPDRSTYT+LINGHV+QNNLKEAFR HDEMLQRG
Sbjct: 680 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 739

Query: 481 FVPDDAF 487
           FVPDD F
Sbjct: 740 FVPDDKF 746



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 244/491 (49%), Gaps = 35/491 (7%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           + + ++ L+  Y +   L E  +    +  KGL   +   NSL+ GL K G  D A E+ 
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            E+++ G+  +  T N ++   C+ + +   +    +M  +GV PD+V+++TLI  + R 
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L+ A      M   GL P    Y  IING C+ G  L A  + DEML+ G   D  TY
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N +L   CR   + +A+ +F+EM  +GV PD  +F+ LI    K+G +++AL  F  M  
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PD V Y  LI GFC+ G M +A K+  +M+ +    + ++Y  ++NG C    ++E
Sbjct: 423 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 482

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+ EM  +G+ P   +  T+I GY + G+ +KA      M+   + PD ++YNTLI+
Sbjct: 483 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 542

Query: 389 GFVREENMDK-----------------------------------AFALVSKMENQGLVP 413
           GF +   M+K                                   AF L  +M  +G   
Sbjct: 543 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 602

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
            +IT N I+ G+CR G    ++  L  M+ KG+ PD  TY TLING + + N+  AF   
Sbjct: 603 TIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALV 662

Query: 474 DEMLQRGFVPD 484
           ++M   G +PD
Sbjct: 663 NKMENSGLLPD 673



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 174/351 (49%), Gaps = 24/351 (6%)

Query: 137 SFSTLIGIFSRNGQL-DRALMYFREMKSAGLVPDNVLYTIIIN-GYC-RNGFVLEALKMR 193
           SFS +I I  R+ +L D   +  R ++ +G+    ++ ++++  G C  N  V + L   
Sbjct: 134 SFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLL--- 190

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
                      V TY        +A+ L E  + F  +  +G+        +L+ G  K 
Sbjct: 191 -----------VRTY-------VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKV 232

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G ++ A  ++  + +  ++ ++ T N +I+  CK  ++E      +DM  + + P+ ++Y
Sbjct: 233 GWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY 292

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             LIN YC  G + EAF L   M GKG+KP + + N II G C++G   +A   L +M+ 
Sbjct: 293 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 352

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+ PD+ +YN L+    R +NM  A  +  +M +QG+VPD+++++ ++    + G +  
Sbjct: 353 IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ 412

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +      M   GL PD   YT LI G      + EA +  DEML++G V D
Sbjct: 413 ALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 463



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 2/246 (0%)

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           F  L+  + +   + +    F ++  K +   I   N+L+ G  KVG ++ A +++ +++
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              +  N  +  I+IN  C    +        +M  KG+ P +V+ NT+I  YCR G   
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 306

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +A E +  M  +G+ P   +YN +ING  +     +A  ++ +M   G+ PD  TYN++L
Sbjct: 307 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 366

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQRGF 481
              CR   M D+E I   M  +G+ PD  +++ LI G +S+N  L +A ++  +M   G 
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GLLSKNGCLDQALKYFRDMKNAGL 425

Query: 482 VPDDAF 487
            PD+  
Sbjct: 426 APDNVI 431



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 90/178 (50%)

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N + + +L+  Y     + E    +  +  KG+  ++ +CN+++ G  + G    A E  
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            ++V  GV  +  + N +IN   + + ++   + +S ME +G+ PDV+TYN ++  +CRQ
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G + ++  ++  M  KGL P   TY  +ING         A    DEML+ G  PD A
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 360


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/487 (73%), Positives = 430/487 (88%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+NALCK+ KI++ K FL +ME+KGV+PD VTYNTLINAYCR+G LEEAF+LM+SMSGKG
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP VFTYN++INGLCK G+  RAK VLDEML++G+SPDTATYN LLVE CR +NM +AE
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 483

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF EM  +GV PD+VSFS LIG+ S+NG LD+AL YFR+MK+AGL PDNV+YTI+I G+
Sbjct: 484 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG + EALK+RDEMLE+GC +DVVTYNTILNGLC+ KML+EAD+LF EM ERGVFPDF
Sbjct: 544 CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 603

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTFTTLI+G+ KDGNMNKA+ LF++M Q+++KPD+VTYNTLIDGFCK  EMEK N+LW D
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MISR+I PN+ISYGILINGYC+MG V+EAFRLW EMV KG + T+++CNTI+KGYCR+G+
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A KADEFLS M+ +G+ PD I+YNTLINGF++EENMD+AFALV+KMEN GL+PDVITYNV
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 783

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL GF RQGRM ++ELI+ +MIE+G+NPDRSTYT+LINGHV+QNNLKEAFR HDEMLQRG
Sbjct: 784 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 843

Query: 481 FVPDDAF 487
           FVPDD F
Sbjct: 844 FVPDDKF 850



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 244/491 (49%), Gaps = 35/491 (7%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           + + ++ L+  Y +   L E  +    +  KGL   +   NSL+ GL K G  D A E+ 
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            E+++ G+  +  T N ++   C+ + +   +    +M  +GV PD+V+++TLI  + R 
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L+ A      M   GL P    Y  IING C+ G  L A  + DEML+ G   D  TY
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N +L   CR   + +A+ +F+EM  +GV PD  +F+ LI    K+G +++AL  F  M  
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PD V Y  LI GFC+ G M +A K+  +M+ +    + ++Y  ++NG C    ++E
Sbjct: 527 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSE 586

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+ EM  +G+ P   +  T+I GY + G+ +KA      M+   + PD ++YNTLI+
Sbjct: 587 ADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 646

Query: 389 GFVREENMDK-----------------------------------AFALVSKMENQGLVP 413
           GF +   M+K                                   AF L  +M  +G   
Sbjct: 647 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 706

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
            +IT N I+ G+CR G    ++  L  M+ KG+ PD  TY TLING + + N+  AF   
Sbjct: 707 TIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALV 766

Query: 474 DEMLQRGFVPD 484
           ++M   G +PD
Sbjct: 767 NKMENSGLLPD 777



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 175/384 (45%), Gaps = 55/384 (14%)

Query: 137 SFSTLIGIFSRNGQL-DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           SFS +I I  R+ +L D   +  R ++ +G+    ++ ++++                  
Sbjct: 238 SFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLT----------------- 280

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
                C  + + ++ ++    +A+ L E  + F  +  +G+        +L+ G  K G 
Sbjct: 281 --YGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGW 338

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           ++ A  ++  + +  ++ ++ T N +I+  CK  ++E      +DM  + + P+ ++Y  
Sbjct: 339 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 398

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LIN YC  G + EAF L   M GKG+KP + + N II G C++G   +A   L +M+  G
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458

Query: 376 VDPDSISYNTLINGFVREENM-----------------------------------DKAF 400
           + PD+ +YN L+    R +NM                                   D+A 
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
                M+N GL PD + Y +++ GFCR G M ++  +   M+E+G   D  TY T++NG 
Sbjct: 519 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGL 578

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPD 484
             +  L EA     EM +RG  PD
Sbjct: 579 CKEKMLSEADELFTEMTERGVFPD 602



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 2/246 (0%)

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           F  L+  + +   + +    F ++  K +   I   N+L+ G  KVG ++ A +++ +++
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              +  N  +  I+IN  C    +        +M  KG+ P +V+ NT+I  YCR G   
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +A E +  M  +G+ P   +YN +ING  +     +A  ++ +M   G+ PD  TYN++L
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 470

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQRGF 481
              CR   M D+E I   M  +G+ PD  +++ LI G +S+N  L +A ++  +M   G 
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GLLSKNGCLDQALKYFRDMKNAGL 529

Query: 482 VPDDAF 487
            PD+  
Sbjct: 530 APDNVI 535



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 90/178 (50%)

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N + + +L+  Y     + E    +  +  KG+  ++ +CN+++ G  + G    A E  
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            ++V  GV  +  + N +IN   + + ++   + +S ME +G+ PDV+TYN ++  +CRQ
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G + ++  ++  M  KGL P   TY  +ING         A    DEML+ G  PD A
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 464


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/487 (73%), Positives = 431/487 (88%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+NALCK+ KI++ K FL +ME+KGV+PD VTYNTLINAYCR+G LEEAF+LM+SMSGKG
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP VFTYN++INGLCK G+  RAK VLDEML++G+SPDTATYN LLVE CR +NM +AE
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 222

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF EM  +GV PD+VSFS LIG+ S+NG LD+AL YFR+MK+AGL PDNV+YTI+I G+
Sbjct: 223 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG + EALK+RDEMLE+GCV+DVVTYNTILNGLC+ KML+EAD+LF EM ERGVFPDF
Sbjct: 283 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 342

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTFTTLI+G+ KDGNMNKA+ LF++M Q+++KPD+VTYNTLIDGFCK  EMEK N+LW D
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 402

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MISR+I PN+ISYGILINGYC+MG V+EAFRLW EMV KG + T+++CNTI+KGYCR+G+
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 462

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A KADEFLS M+ +G+ PD I+YNTLINGF++EENMD+AFALV+KMEN GL+PDVITYNV
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 522

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL GF RQGRM ++ELI+ +MIE+G+NPDRSTYT+LINGHV+QNNLKEAFR HDEMLQRG
Sbjct: 523 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 582

Query: 481 FVPDDAF 487
           FVPDD F
Sbjct: 583 FVPDDKF 589



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 244/491 (49%), Gaps = 35/491 (7%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           + + ++ L+  Y +   L E  +    +  KGL   +   NSL+ GL K G  D A E+ 
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            E+++ G+  +  T N ++   C+ + +   +    +M  +GV PD+V+++TLI  + R 
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L+ A      M   GL P    Y  IING C+ G  L A  + DEML+ G   D  TY
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N +L   CR   + +A+ +F+EM  +GV PD  +F+ LI    K+G +++AL  F  M  
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PD V Y  LI GFC+ G M +A K+  +M+ +    + ++Y  ++NG C    ++E
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 325

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+ EM  +G+ P   +  T+I GY + G+ +KA      M+   + PD ++YNTLI+
Sbjct: 326 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 385

Query: 389 GFVREENMDK-----------------------------------AFALVSKMENQGLVP 413
           GF +   M+K                                   AF L  +M  +G   
Sbjct: 386 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 445

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
            +IT N I+ G+CR G    ++  L  M+ KG+ PD  TY TLING + + N+  AF   
Sbjct: 446 TIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALV 505

Query: 474 DEMLQRGFVPD 484
           ++M   G +PD
Sbjct: 506 NKMENSGLLPD 516



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 148/284 (52%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  + + ++ ++    +A+ L E  + F  +  +G+        +L+ G  K G ++ A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            ++  + +  ++ ++ T N +I+  CK  ++E      +DM  + + P+ ++Y  LIN Y
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + EAF L   M GKG+KP + + N II G C++G   +A   L +M+  G+ PD+
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YN L+    R +NM  A  +  +M +QG+VPD+++++ ++    + G +  +      
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M   GL PD   YT LI G      + EA +  DEML++G V D
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 306



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 123/247 (49%), Gaps = 2/247 (0%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            F  L+  + +   + +    F ++  K +   I   N+L+ G  KVG ++ A +++ ++
Sbjct: 29  VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +   +  N  +  I+IN  C    +        +M  KG+ P +V+ NT+I  YCR G  
Sbjct: 89  VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 148

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A E +  M  +G+ P   +YN +ING  +     +A  ++ +M   G+ PD  TYN++
Sbjct: 149 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 208

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQRG 480
           L   CR   M D+E I   M  +G+ PD  +++ LI G +S+N  L +A ++  +M   G
Sbjct: 209 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GLLSKNGCLDQALKYFRDMKNAG 267

Query: 481 FVPDDAF 487
             PD+  
Sbjct: 268 LAPDNVI 274



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 121/220 (55%)

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           ++T  +   + + ++ L+  + +  ++ +  + +  + S+ +  +  +   L+ G   +G
Sbjct: 17  VLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVG 76

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V  A+ ++ E+V  G++  + + N +I   C++        FLS M  +GV PD ++YN
Sbjct: 77  WVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYN 136

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLIN + R+  +++AF L+  M  +GL P V TYN I+ G C+ G+   ++ +L  M++ 
Sbjct: 137 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 196

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G++PD +TY  L+      +N+ +A R  DEM  +G VPD
Sbjct: 197 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 236



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 90/178 (50%)

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N + + +L+  Y     + E    +  +  KG+  ++ +CN+++ G  + G    A E  
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            ++V  GV  +  + N +IN   + + ++   + +S ME +G+ PDV+TYN ++  +CRQ
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G + ++  ++  M  KGL P   TY  +ING         A    DEML+ G  PD A
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 203


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/487 (69%), Positives = 421/487 (86%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNALCKD K+D+  ++L EME+KGVY D VTYNTL+NAYCR G + EAF L++ M+GKG
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKPG+FTYN+LINGLCK+G  +RAK VLDEML +GL P+ AT+N +LVESCRKE++ EAE
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAE 349

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM +RGV PD++SFS+++G+FSRNG+L RAL YF +MK  GLVPD V+YTI+INGY
Sbjct: 350 RVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY 409

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRN  V  ALKMR+EM+E+GCVMDVVTYNT+LNGLCR KML +AD+LF EM+ERGVFPDF
Sbjct: 410 CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDF 469

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT TTLIHG+CKDGNM KAL+LF+ MT +S+KPD+VTYNTL+DGFCKVGEMEKA +LW D
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYD 529

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MISR+I P+YIS+ ILING+CS+G V+EAFRLW EM  KGIKPTLV+CNTIIKGY R+G+
Sbjct: 530 MISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGN 589

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            SKA++FL+ M+SEGV PD I+YNTLIN FV+EEN D+AF L++ ME +GL+P+++TYN 
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL GF R GRM ++E++L +MI+KG+NPD+STYT+LING+VS++N+KEAFR HDEMLQRG
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709

Query: 481 FVPDDAF 487
           FVPDD F
Sbjct: 710 FVPDDKF 716



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 226/437 (51%), Gaps = 24/437 (5%)

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQM--GLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           +LI  L +K  C     +L  ++Q     SP+ +   TL+    + + + EA+ +   + 
Sbjct: 69  TLIPQLLQK--CQNYPLLLPNLIQTIASTSPNPSIIATLIHFLVQSKKLPEAQSLLLRII 126

Query: 128 RR-GVA-------------------PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
           R+ GV+                    ++V F  LI  + +  +L      F+ ++  G  
Sbjct: 127 RKSGVSHVEVIDSLISTSSSNLNSNQNVVVFDLLIRTYVQARKLREGSEAFQLLRKRGFC 186

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
                   ++    + G+V  A K+ ++ ++ G +++V T N ++N LC+   L      
Sbjct: 187 VSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVY 246

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
            +EM E+GV+ D  T+ TL++ +C+ G +++A  L D M  K +KP + TYN LI+G CK
Sbjct: 247 LSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCK 306

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G  E+A ++  +M+   + PN  ++  ++   C    V EA R++ EM+ +G+ P L+S
Sbjct: 307 EGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS 366

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            ++I+  + R+G+  +A  +  KM   G+ PD++ Y  LING+ R +++  A  + ++M 
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G V DV+TYN +L G CR   + D++ +   M+E+G+ PD  T TTLI+G+    N+ 
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486

Query: 468 EAFRFHDEMLQRGFVPD 484
           +A    + M  R   PD
Sbjct: 487 KALSLFETMTLRSLKPD 503



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 85/176 (48%)

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           + + +LI  Y     + E    +  +  +G   ++ +CN ++    + G    A +    
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
            V  G   +  + N ++N   ++  +D     +S+ME +G+  D++TYN ++  +CR+G 
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + ++  ++  M  KGL P   TY  LING   + + + A R  DEML  G  P+ A
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAA 330


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/487 (65%), Positives = 409/487 (83%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNALCKD K ++   FL +ME KGV+ D VTYNTLINAYCREG +EEAFQL+NS S +G
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++PG+ TYN+++ GLCK G+ DRAK+VL EMLQ+GL+P+ ATYNTLLVE CR++N+ EA+
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF EMSRRGV PD+VSFS+LIG+ +RNG L +ALM+FREM+ +G+VPDNV+YTI+I+G+
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG + +ALKMRDEML +GC MDVVTYNT LNGLC+ KM  +AD LFNEM+ERG+ PDF
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTFTTLI G+CKDGNM+KALNLF+ M + ++KPD VTYNTLIDGFCK GEM +A +LW D
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI + I P++ISYG ++NG+CS G + EA  L  +M+ KGI+P LV+CNT+IKGYCRSGD
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E+LSKM+S G+ PDS SYNTLI+G+++E N++KAF L+++ME +GL  ++ITYN+
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL GFC +G+M ++E +L +MIE G+NPD +TY++LINGHVSQ+N+KEAFRFHDEMLQRG
Sbjct: 683 ILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742

Query: 481 FVPDDAF 487
            VPDD F
Sbjct: 743 LVPDDRF 749



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 240/454 (52%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           + Y+ L+  Y +   L E  +    +  KG+   +   N L+ GL + G  D A E+  E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           +++ G+  +  T N ++   C+            +M  +GV  DIV+++TLI  + R G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           ++ A        S G+ P  + Y  I+ G C+ G    A  +  EML+ G   +  TYNT
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +L  +CR   + EA ++F+EM  RGV PD  +F++LI    ++G++ +AL  F  M +  
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I PD V Y  LIDGFC+ G +  A K+  +M++R    + ++Y   +NG C      +A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L+ EMV +G+ P   +  T+I+GYC+ G+  KA      MV   + PD ++YNTLI+GF
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +   M +A  L   M  + ++PD I+Y  +L GFC  G + ++  +  +M+EKG+ P+ 
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            T  TLI G+    ++ +A+ +  +M+  G +PD
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPD 641



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 180/373 (48%), Gaps = 18/373 (4%)

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           R   +SEA+     M R+     +    +LI              YF    S GL+ D +
Sbjct: 147 RGRRLSEAQACILRMVRKSGVSRVKVVESLIS----------TCFYF---GSVGLIYDLL 193

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           + T +     R G   EA ++   +  KG  + +   N +L GL R   +  A +++ E+
Sbjct: 194 VRTYVQAKKLREGS--EAFQI---LRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           +  G+  + YT   +++  CKD      +     M  K +  DIVTYNTLI+ +C+ G +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           E+A +L     SR + P  ++Y  ++ G C +G    A  +  EM+  G+ P   + NT+
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           +   CR  +  +A E   +M   GV PD +S+++LI    R  ++ +A     +ME  G+
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           VPD + Y +++ GFCR G + D+  +   M+ +G   D  TY T +NG   +    +A  
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 472 FHDEMLQRGFVPD 484
             +EM++RG VPD
Sbjct: 489 LFNEMVERGMVPD 501



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 120/244 (49%)

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +  L+  + +   + +    F I+ +K +   I   N L+ G  + G ++ A +++ +++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              I  N  +  I++N  C             +M GKG+   +V+ NT+I  YCR G   
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +A + L+   S G++P  ++YN ++ G  +    D+A  ++ +M   GL P+  TYN +L
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
              CR+  + +++ I   M  +G+ PD  ++++LI       +L +A     EM + G V
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 483 PDDA 486
           PD+ 
Sbjct: 430 PDNV 433


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/487 (65%), Positives = 409/487 (83%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNALCKD K ++   FL +ME KGV+ D VTYNTLINAYCREG +EEAFQL+NS S +G
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++PG+ TYN+++ GLCK G+ DRAK+VL EMLQ+GL+P+ ATYNTLLVE CR++N+ EA+
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF EMSRRGV PD+VSFS+LIG+ +RNG L +ALM+FREM+ +G+VPDNV+YTI+I+G+
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG + +ALKMRDEML +GC MDVVTYNT LNGLC+ KM  +AD LFNEM+ERG+ PDF
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTFTTLI G+CKDGNM+KALNLF+ M + ++KPD VTYNTLIDGFCK GEM +A +LW D
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI + I P++ISYG ++NG+CS G + EA  L  +M+ KGI+P LV+CNT+IKGYCRSGD
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E+LSKM+S G+ PDS SYNTLI+G+++E N++KAF L+++ME +GL  ++ITYN+
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL GFC +G+M ++E +L +MIE G+NPD +TY++LINGHVSQ+N+KEAFRFHDEMLQRG
Sbjct: 683 ILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742

Query: 481 FVPDDAF 487
            VPDD F
Sbjct: 743 LVPDDRF 749



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 240/454 (52%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           + Y+ L+  Y +   L E  +    +  KG+   +   N L+ GL + G  D A E+  E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           +++ G+  +  T N ++   C+            +M  +GV  DIV+++TLI  + R G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           ++ A        S G+ P  + Y  I+ G C+ G    A  +  EML+ G   +  TYNT
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +L  +CR   + EA ++F+EM  RGV PD  +F++LI    ++G++ +AL  F  M +  
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I PD V Y  LIDGFC+ G +  A K+  +M++R    + ++Y   +NG C      +A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L+ EMV +G+ P   +  T+I+GYC+ G+  KA      MV   + PD ++YNTLI+GF
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +   M +A  L   M  + ++PD I+Y  +L GFC  G + ++  +  +M+EKG+ P+ 
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            T  TLI G+    ++ +A+ +  +M+  G +PD
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPD 641



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 180/373 (48%), Gaps = 18/373 (4%)

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           R   +SEA+     M R+     +    +LI              YF    S GL+ D +
Sbjct: 147 RGRRLSEAQACILRMVRKSGVSRVKVVESLIS----------TCFYF---GSVGLIYDLL 193

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           + T +     R G   EA ++   +  KG  + +   N +L GL R   +  A +++ E+
Sbjct: 194 VRTYVQAKKLREGS--EAFQI---LRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           +  G+  + YT   +++  CKD      +     M  K +  DIVTYNTLI+ +C+ G +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           E+A +L     SR + P  ++Y  ++ G C +G    A  +  EM+  G+ P   + NT+
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           +   CR  +  +A E   +M   GV PD +S+++LI    R  ++ +A     +ME  G+
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           VPD + Y +++ GFCR G + D+  +   M+ +G   D  TY T +NG   +    +A  
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 472 FHDEMLQRGFVPD 484
             +EM++RG VPD
Sbjct: 489 LFNEMVERGMVPD 501



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 120/244 (49%)

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +  L+  + +   + +    F I+ +K +   I   N L+ G  + G ++ A +++ +++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              I  N  +  I++N  C             +M GKG+   +V+ NT+I  YCR G   
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +A + L+   S G++P  ++YN ++ G  +    D+A  ++ +M   GL P+  TYN +L
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
              CR+  + +++ I   M  +G+ PD  ++++LI       +L +A     EM + G V
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 483 PDDA 486
           PD+ 
Sbjct: 430 PDNV 433


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/489 (62%), Positives = 390/489 (79%), Gaps = 2/489 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNALCKD K++    FL E+++KGVYPD VTYNTLI+AY  +G +EEAF+LM++M  KG
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             PGV+TYN++INGLCK G+ +RAKEV  EML+ GLSPD+ TY +LL+E+C+K +  E E
Sbjct: 291 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETE 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF +M  R V PD+V FS+++ +F+R+G LD+ALMYF  +K AGL+PDNV+YTI+I GY
Sbjct: 351 NIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EA+ +R+EML++GC MDVVTYNTIL+GLC+ KML EAD LFNEM ERG+FPD 
Sbjct: 411 CRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDS 470

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT T LI GHCK GN+  A+ LF  M +K IK D+VTYNTL+DGF KVG+++ A ++WAD
Sbjct: 471 YTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWAD 530

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S++I P  IS+ IL+N  CS GH++EAFR+W EM+ K IKPT++ CN++IKGYCRSG+
Sbjct: 531 MVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGN 590

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ--GLVPDVITY 418
           AS  + FL KM+SEG  PD ISYNTLI GFV+EENM KAF LV KME +  GLVPDV TY
Sbjct: 591 ASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTY 650

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N IL GFCR+ +M ++E +L +MIE+G+NPDRSTYT+LING VSQ+NL EAFRFHDEMLQ
Sbjct: 651 NSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQ 710

Query: 479 RGFVPDDAF 487
           RGF PDD F
Sbjct: 711 RGFSPDDKF 719



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 227/475 (47%), Gaps = 52/475 (10%)

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKE-VLDEMLQMGLS----------------PDTATY 103
            K    + +++I+ L + GR   A+  VL  + + G+S                 + + +
Sbjct: 99  FKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVF 158

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           + L+    +   + EA E F  +  +G    I + + LIG   R G ++ A   ++E+  
Sbjct: 159 DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISR 218

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
           +G+  +     I++N  C++G + +      E+ EKG   D+VTYNT+++      ++ E
Sbjct: 219 SGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEE 278

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A +L + M  +G  P  YT+ T+I+G CK G   +A  +F  M +  + PD  TY +L+ 
Sbjct: 279 AFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 338

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYIS------------------------------- 312
             CK G+  +   +++DM SR + P+ +                                
Sbjct: 339 EACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 398

Query: 313 ----YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
               Y ILI GYC  G ++EA  L  EM+ +G    +V+ NTI+ G C+     +AD+  
Sbjct: 399 DNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 458

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           ++M   G+ PDS +   LI+G  +  N+  A  L  KM+ + +  DV+TYN +L GF + 
Sbjct: 459 NEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKV 518

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G +  ++ I   M+ K + P   +++ L+N   S+ +L EAFR  DEM+ +   P
Sbjct: 519 GDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 187/379 (49%), Gaps = 21/379 (5%)

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           +LV S R   +S+A+     M RR     +   ++L+  +S  G  D             
Sbjct: 112 ILVRSGR---LSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDS------------ 156

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
                 ++ ++I  + +   + EA +    +  KG  + +   N ++  L R   +  A 
Sbjct: 157 ------VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAW 210

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            ++ E+   GV  + YT   +++  CKDG M K       + +K + PDIVTYNTLI  +
Sbjct: 211 RIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAY 270

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
              G ME+A +L   M S+  SP   +Y  +ING C  G    A  ++ EM+  G+ P  
Sbjct: 271 SSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 330

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            +  +++   C+ GDA + +   S M S  V PD + ++++++ F R  N+DKA    + 
Sbjct: 331 TTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 390

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ++  GL+PD + Y +++ G+CR+G + ++  +   M+++G   D  TY T+++G   +  
Sbjct: 391 VKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 450

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           L EA +  +EM +RG  PD
Sbjct: 451 LGEADKLFNEMTERGLFPD 469



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 117/245 (47%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            F  LI    +   + +A   F ++  K     I   N LI    ++G +E A +++ ++
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
               +  N  +  I++N  C  G + +      E+  KG+ P +V+ NT+I  Y   G  
Sbjct: 217 SRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLM 276

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A E +  M S+G  P   +YNT+ING  +    ++A  + ++M   GL PD  TY  +
Sbjct: 277 EEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 336

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L   C++G   ++E I   M  + + PD   ++++++      NL +A  + + + + G 
Sbjct: 337 LMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 396

Query: 482 VPDDA 486
           +PD+ 
Sbjct: 397 IPDNV 401


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/489 (62%), Positives = 389/489 (79%), Gaps = 2/489 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNALCKD K++    FL ++++KGVYPD VTYNTLI+AY  +G +EEAF+LMN+M GKG
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             PGV+TYN++INGLCK G+ +RAKEV  EML+ GLSPD+ TY +LL+E+C+K ++ E E
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M  R V PD+V FS+++ +F+R+G LD+ALMYF  +K AGL+PDNV+YTI+I GY
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A+ +R+EML++GC MDVVTYNTIL+GLC+ KML EAD LFNEM ER +FPD 
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT T LI GHCK GN+  A+ LF  M +K I+ D+VTYNTL+DGF KVG+++ A ++WAD
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S++I P  ISY IL+N  CS GH+ EAFR+W EM+ K IKPT++ CN++IKGYCRSG+
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ--GLVPDVITY 418
           AS  + FL KM+SEG  PD ISYNTLI GFVREENM KAF LV KME +  GLVPDV TY
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N IL GFCRQ +M ++E++L +MIE+G+NPDRSTYT +ING VSQ+NL EAFR HDEMLQ
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720

Query: 479 RGFVPDDAF 487
           RGF PDD F
Sbjct: 721 RGFSPDDKF 729



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 227/475 (47%), Gaps = 52/475 (10%)

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-GLS----------------PDTATY 103
            K    + +++I+ L + GR   A+  L  M++  G+S                 + + +
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           + L+    +   + EA E F  +  +G    I + + LIG   R G ++ A   ++E+  
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
           +G+  +     I++N  C++G + +      ++ EKG   D+VTYNT+++      ++ E
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A +L N M  +G  P  YT+ T+I+G CK G   +A  +F  M +  + PD  TY +L+ 
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYIS------------------------------- 312
             CK G++ +  K+++DM SR + P+ +                                
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408

Query: 313 ----YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
               Y ILI GYC  G ++ A  L  EM+ +G    +V+ NTI+ G C+     +AD+  
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           ++M    + PDS +   LI+G  +  N+  A  L  KM+ + +  DV+TYN +L GF + 
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G +  ++ I   M+ K + P   +Y+ L+N   S+ +L EAFR  DEM+ +   P
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 182/366 (49%), Gaps = 17/366 (4%)

Query: 136 VSFSTLIGIFSRNGQL-DRALMYFREMKSAGLV----------------PDNVLYTIIIN 178
           +S S +I I  R+G+L D      R ++ +G+                  ++ ++ ++I 
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            Y +   + EA +    +  KG  + +   N ++  L R   +  A  ++ E+   GV  
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           + YT   +++  CKDG M K       + +K + PDIVTYNTLI  +   G ME+A +L 
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M  +  SP   +Y  +ING C  G    A  ++ EM+  G+ P   +  +++   C+ 
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           GD  + ++  S M S  V PD + ++++++ F R  N+DKA    + ++  GL+PD + Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            +++ G+CR+G +  +  +   M+++G   D  TY T+++G   +  L EA +  +EM +
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473

Query: 479 RGFVPD 484
           R   PD
Sbjct: 474 RALFPD 479



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 118/245 (48%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            F  LI  + +   + +A   F ++  K     I   N LI    ++G +E A  ++ ++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
               +  N  +  I++N  C  G + +      ++  KG+ P +V+ NT+I  Y   G  
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A E ++ M  +G  P   +YNT+ING  +    ++A  + ++M   GL PD  TY  +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L   C++G + ++E +   M  + + PD   ++++++      NL +A  + + + + G 
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406

Query: 482 VPDDA 486
           +PD+ 
Sbjct: 407 IPDNV 411


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 268/358 (74%), Positives = 319/358 (89%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           VTYNTLI AYCREG LEEAF++MNSM+ KGLKP +FTYN++INGLCKKGR  RAK +L E
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML +GLSPDT TYNTLLVESCR++N SEA+EIF EM R+GV PD+VSFS+L+ +FSRN  
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           LD+AL+YFR+MK  GLVPDNV+YT++++GYCRNG +LEALK+RDEMLE+GCV+DV+ YNT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ILNGLC+ KMLT+AD LF+EM+ERG  PDFYTFTTLIHGHC+DGNM KAL+LF  MTQ++
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           IKPDIV YNTLIDGFCKVGEMEKA++LW  MISRKI PN+I+YGILIN YCS+GHV+EAF
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           RLW  M+ KGIKPTLV+CNT+IKGYCRSGD+SKADEFL +M+++GV PD ISYNTLIN
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 121/352 (34%), Positives = 195/352 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C++  ++ A   +  M  KG+ P   TYN +IN  C++G    A  ++  M   G
Sbjct: 7   LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TYN+L+   C++     AKE+  EML+ G+ PD  ++++L+    R  ++ +A 
Sbjct: 67  LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M + G+ PD V ++ L+  + RNG +  AL    EM   G V D + Y  I+NG 
Sbjct: 127 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 186

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A K+ DEM+E+G + D  T+ T+++G C+   +T+A  LF  M +R + PD 
Sbjct: 187 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 246

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TLI G CK G M KA  L+D M  + I P+ +TY  LI+ +C VG + +A +LW  
Sbjct: 247 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 306

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           MI + I P  ++   +I GYC  G  ++A      M+ KG+ P  +S NT+I
Sbjct: 307 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 191/350 (54%)

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           +V+++TLIG + R G L+ A      M   GL P    Y  IING C+ G    A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EML  G   D  TYNT+L   CR    +EA ++F EML +GV PD  +F++L+    ++ 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
           ++++AL  F  M +  + PD V Y  L+ G+C+ G M +A K+  +M+ +    + I+Y 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            ++NG C    +T+A +L+ EMV +G  P   +  T+I G+C+ G+ +KA      M   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
            + PD ++YNTLI+GF +   M+KA  L   M ++ + P+ ITY +++  +C  G + ++
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +   MIEKG+ P   T  T+I G+    +  +A  F   M+ +G  PD
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 350



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 186/318 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +   AK  L EM   G+ PDT TYNTL+   CR     EA ++   M  +G
Sbjct: 42  IINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG 101

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + +++SL+    +    D+A     +M + GL PD   Y  L+   CR  NM EA 
Sbjct: 102 VVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEAL 161

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  EM  +G   D+++++T++    +   L  A   F EM   G +PD   +T +I+G+
Sbjct: 162 KIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGH 221

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G + +AL +   M ++    D+V YNT+++G C+   + +A +L++ M+ R +FP+ 
Sbjct: 222 CQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNH 281

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+ +C  G++++A  L+D+M +K IKP +VT NT+I G+C+ G+  KA++    
Sbjct: 282 ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 341

Query: 301 MISRKISPNYISYGILIN 318
           MI++ ++P++ISY  LIN
Sbjct: 342 MIAKGVAPDHISYNTLIN 359



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 79/143 (55%)

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           +V+ NT+I  YCR G   +A E ++ M  +G+ P   +YN +ING  ++    +A  ++ 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M N GL PD  TYN +L   CR+    +++ I   M+ +G+ PD  ++++L+       
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 465 NLKEAFRFHDEMLQRGFVPDDAF 487
           +L +A  +  +M + G VPD+  
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVI 143



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 68/113 (60%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  +++ A      M  + ++P+ +TY  LINAYC  G + EAF+L + M  KG
Sbjct: 252 LIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 311

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK 113
           +KP + T N++I G C+ G   +A E L  M+  G++PD  +YNTL+ +  R+
Sbjct: 312 IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINDGKRR 364


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 250/487 (51%), Positives = 346/487 (71%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV++ CK  + D A   + EME++ V+PD VT+N LI+A  R G ++ A  L++SM+ KG
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKPG+ T+NS++ GLCK  R D+AKEV   M Q  ++PD  ++N L+   CR   + EA 
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + + EM +RGV PD+VSFS LIG+FS  G++D A  Y REMK  GLVPD V+YT++I G+
Sbjct: 283 KFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EAL++RDEM+  GC+ DVVTYNT+LNGLC+   L +A++L NEM ERGV PD 
Sbjct: 343 CRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDL 402

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFTTLIHG+C+DGN  KAL LFD +  + ++PD+V YN+LIDG C+ G++ KAN+LW D
Sbjct: 403 CTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDD 462

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +R+I PN+++Y ILI+ +C  G V EAF    EMV KG  P +++ N+IIKGYCRSG+
Sbjct: 463 MHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGN 522

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K  +FL KM+ + + PD I++NTLI+G+++EENM  AF + + ME + + PD +TYN+
Sbjct: 523 VKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNM 582

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+ GF  QG M ++  +  +M   G+ PDR TY +LINGHV+  N KEAF+ HDEM+ RG
Sbjct: 583 IINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRG 642

Query: 481 FVPDDAF 487
           F PDD F
Sbjct: 643 FAPDDKF 649



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 228/457 (49%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++ LI  Y +     EAF+    +    +       N+L+  L + G    A+E 
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              +L      +  T N ++   C+     +A+ +  EM +R V PD+V+ + LI    R
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +D A+     M + GL P  V +  ++ G C++    +A ++   M +     DV +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N ++ G CR   + EA   + EM +RGV PD  +F+ LI      G M+ A      M 
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
              + PD V Y  +I GFC+ G M +A ++  +M+     P+ ++Y  L+NG C    + 
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  EM  +G+ P L +  T+I GYCR G+  KA +    ++ + + PD ++YN+LI
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  R+ ++ KA  L   M  + + P+ +TY++++   C +G++ ++   L  M+ KG  
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNL 504

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TY ++I G+    N+K+  +F  +M+Q   +PD
Sbjct: 505 PNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 221/436 (50%), Gaps = 37/436 (8%)

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           +E++  +L    +P    ++ L+    +     EA E F  +    V     + + L+  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAA 131

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM- 203
            SR G    A   +R + S+    +     I+++ YC++    +A  +  EM EK CV  
Sbjct: 132 LSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEM-EKRCVFP 190

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           DVVT+N +++   RA  +  A  L + M  +G+ P   TF +++ G CK    +KA  +F
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF 250

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS----------- 312
             M Q S+ PD+ ++N LI GFC+VGE+E+A K + +M  R ++P+ +S           
Sbjct: 251 RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310

Query: 313 ------------------------YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
                                   Y ++I G+C  G ++EA R+  EMVG G  P +V+ 
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           NT++ G C+      A+E L++M   GV PD  ++ TLI+G+ R+ N +KA  L   + +
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           Q L PDV+ YN ++ G CR+G +  +  +   M  + + P+  TY+ LI+ H  +  ++E
Sbjct: 431 QRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEE 490

Query: 469 AFRFHDEMLQRGFVPD 484
           AF F DEM+ +G +P+
Sbjct: 491 AFGFLDEMVSKGNLPN 506



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 201/405 (49%), Gaps = 15/405 (3%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA---------------PDIVSFS 139
           G  P TA       ++      SE + +   MSRR  A               P    F 
Sbjct: 32  GARPSTAALAAAATDAAAAGRASECQSLLLRMSRRRGASRREIVSSLLASSPTPQPQVFD 91

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI  ++++ +   A   FR +    +         ++    R G+   A +    +L  
Sbjct: 92  LLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRLVLSS 151

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
              ++  T N +++  C++    +AD + +EM +R VFPD  T   LI    + G+++ A
Sbjct: 152 DSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA 211

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + L D M  K +KP IVT+N+++ G CK    +KA +++  M    ++P+  S+ ILI G
Sbjct: 212 IALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGG 271

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C +G V EA + + EM  +G+ P +VS + +I  +   G    A  +L +M   G+ PD
Sbjct: 272 FCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPD 331

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            + Y  +I GF R  +M +A  +  +M   G +PDV+TYN +L G C+Q R+ D+E +L 
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLN 391

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M E+G+ PD  T+TTLI+G+    N ++A +  D +L +   PD
Sbjct: 392 EMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  540 bits (1391), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 250/487 (51%), Positives = 347/487 (71%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+  CK  + D     + EME++ V+PD VT+N +++A  R G  E A  L++SM  KG
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKPG+ TYNS++ GLC+ G  D+A EV  EM   G++PD  ++  L+   CR   + EA 
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 281

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ EM  RG+ PD+VSFS LIG+F+R G++D A+ Y REM+  GLVPD V+YT++I G+
Sbjct: 282 KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGF 341

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +AL++RDEM+  GC+ DVVTYNT+LNGLC+ + L +A+ L NEM ERGV PD 
Sbjct: 342 CRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDL 401

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFTTLIHG+C +G ++KAL LFD M  + ++PDIVTYNTLIDG C+ G+++KAN LW D
Sbjct: 402 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 461

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR+I PN+++Y ILI+ +C  G V +AF    EM+ KGI P +++ N+IIKGYCRSG+
Sbjct: 462 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGN 521

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            SK  +FL KM+   V PD I+YNTLI+G+++E+ M  AF L++ ME + + PDV+TYN+
Sbjct: 522 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 581

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GF   G + ++  I  +M  KG+ PDR TY ++INGHV+  N KEAF+ HDEMLQRG
Sbjct: 582 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641

Query: 481 FVPDDAF 487
           F PDD F
Sbjct: 642 FAPDDKF 648



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 185/403 (45%), Gaps = 55/403 (13%)

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
           SE + +   MSRR  A      S+L+G                    +   P   ++ ++
Sbjct: 53  SECQSLLLRMSRRRGACRREIVSSLLG--------------------SSPTPQPRVFDLL 92

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I  Y ++    EA +    +L+    +     N +L  L RA     A D +  +     
Sbjct: 93  IRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFSSNS 152

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID------------- 283
             + YT   ++H +CK    +K   +   M ++ + PD+VT+N ++D             
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212

Query: 284 ----------------------GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
                                 G C+ G  +KA +++ +M    ++P+  S+ ILI G+C
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
            +G + EA +++ EM  +GIKP LVS + +I  + R G    A  +L +M   G+ PD +
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            Y  +I GF R   M  A  +  +M   G +PDV+TYN +L G C++ R+ D+E +L  M
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            E+G+ PD  T+TTLI+G+  +  L +A +  D ML +   PD
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 435


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 246/487 (50%), Positives = 347/487 (71%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV++ CK  +       + EME++ V+PD VT+N +++A  R G +E A  L++SM  KG
Sbjct: 165 MVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG 224

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KPG+ TYNS++ GL + GR D+A+EV   M   G++PD  ++N L+   CR   + EA 
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL 284

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + EM  R V PD+VSFS LIG+F+R G++D A  Y REM+  GL+PD V+YT++I G+
Sbjct: 285 RFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGF 344

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +LEAL++RDEM+  GC+ DVVTYNT+LNGLC+ + L++A++L NEM ERGV PD 
Sbjct: 345 CRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDL 404

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFTTLIHG+C+DGN+ KAL  FD ++ + ++PDIVTYNTLIDG C+ G++ KAN+LW D
Sbjct: 405 CTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDD 464

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR+I PN+++Y ILI+ +C  G V  AF    EMV KGI P +++ N+IIKGYCRSG+
Sbjct: 465 MHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGN 524

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            SK  +FL KM  + V PD I+YNTLI+G+V+E  M +AF L+  MEN+ + PD +TYN+
Sbjct: 525 VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNM 584

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I++GF   G M +++ +  +M  +G+ PDR TY ++INGHV   N K++F+ HDEMLQ+G
Sbjct: 585 IISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKG 644

Query: 481 FVPDDAF 487
             PDD F
Sbjct: 645 LAPDDKF 651



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 231/492 (46%), Gaps = 35/492 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++ LI  Y +     EAF+    +    +       N+L+  L + G      + 
Sbjct: 87  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADA 146

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              +L      +T T N ++   C+     E + +  EM +R V PD+V+ + ++    R
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G ++ A+     M S G+ P  V Y  ++ G  RNG   +A ++   M   G   DV +
Sbjct: 207 AGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS 266

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N ++ G CRA  L EA   + EM  R V PD  +F+ LI    + G M+ A      M 
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  + PD V Y  +I GFC+ G M +A ++  +M++    P+ ++Y  L+NG C    ++
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  EM  +G+ P L +  T+I GYCR G+  KA +F   +  + + PD ++YNTLI
Sbjct: 387 DAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLI 446

Query: 388 NGFVREENM-----------------------------------DKAFALVSKMENQGLV 412
           +G  R+ ++                                   D AFA + +M N+G+V
Sbjct: 447 DGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIV 506

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+++TYN I+ G+CR G +   +  L +M    + PD  TY TLI+G+V +  + EAF  
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566

Query: 473 HDEMLQRGFVPD 484
              M      PD
Sbjct: 567 LKIMENENVQPD 578



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 215/435 (49%), Gaps = 37/435 (8%)

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +++  +L    +P    ++ L+    +     EA E F  +    V     + + L+   
Sbjct: 75  DIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAAL 134

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-D 204
           SR G        +R + S+    +     I+++ YC+     E   +  EM EK CV  D
Sbjct: 135 SRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEM-EKRCVFPD 193

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VVT+N +++   RA  +  A  L + M+ +G+ P   T+ +++ G  ++G  +KA  +F 
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFR 253

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS------------ 312
            M    + PD+ ++N LI GFC+ GE+E+A + + +M  R+++P+ +S            
Sbjct: 254 AMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRG 313

Query: 313 -----------------------YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
                                  Y ++I G+C  G + EA R+  EMV  G  P +V+ N
Sbjct: 314 EMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYN 373

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           T++ G C+    S A+E L++M   GV PD  ++ TLI+G+ R+ N++KA      + +Q
Sbjct: 374 TLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQ 433

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            L PD++TYN ++ G CRQG +  +  +   M  + + P+  TY+ LI+ H  +  +  A
Sbjct: 434 RLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNA 493

Query: 470 FRFHDEMLQRGFVPD 484
           F F DEM+ +G VP+
Sbjct: 494 FAFLDEMVNKGIVPN 508


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 250/487 (51%), Positives = 342/487 (70%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV++ CK  + D A   + EME++ V+PD VT+N LI+A  R G ++ A  L++SM+ +G
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKPG+ TYNS++ GLCK  R D+AKEV   M Q  ++PD  ++N L+   CR   + EA 
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + + EM  R V PD+VSFS LIG+FSR G++D A  Y REMK  GLVPD V+YT++I G+
Sbjct: 283 KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EAL++RDEM+  GC+ DVVTYNT+LNGLC+   L +A+ L NEM ERGV PD 
Sbjct: 343 CRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDL 402

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFTTLIHG+C+ GN   AL LFD + ++ ++PD+VTYN+LIDG C+ G++ KAN+LW D
Sbjct: 403 CTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDD 462

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +R+I PN+I+Y ILI+ +C  G V +AF    EMV KG  P + + N+IIKGYCRSG+
Sbjct: 463 MHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGN 522

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K  +FL KM  + V PD I++NTLI+G+++EENM  AF + + ME + + PD +TYN+
Sbjct: 523 VKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNM 582

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+ GF  QG M D+  +   M + G+ PDR TY +LINGHV+  N K+AF+ HDEM+ RG
Sbjct: 583 IINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRG 642

Query: 481 FVPDDAF 487
           F PDD F
Sbjct: 643 FAPDDKF 649



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 226/457 (49%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++ LI  Y +     EAF+    +    +       N+L+  L + G    A+E 
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              +L      +  T N ++   C+      A+ +  EM +R V PD+V+ + LI    R
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +D A+     M + GL P  V Y  ++ G C++    +A ++   M +     DV +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N ++ G CR   + EA   + EM  R V PD  +F+ LI    + G M+ A      M 
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
              + PD V Y  +I GFC+ G M +A ++  +M+     P+ ++Y  L+NG C    + 
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A +L  EM  +G+ P L +  T+I GYCR G+   A +    ++ + + PD ++YN+LI
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  R+ ++ KA  L   M  + ++P+ ITY++++   C +G++ D+   L  M++KG  
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL 504

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TY ++I G+    N+K+  +F  +M Q    PD
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 195/383 (50%), Gaps = 15/383 (3%)

Query: 117 SEAEEIFCEMSRRGVA---------------PDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           SE + +   MSRR  A               P    F  LI  ++++ +   A   FR +
Sbjct: 54  SECQSLLLRMSRRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLL 113

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
               +         ++    R G+   A +    +L     ++  T N +++  C+    
Sbjct: 114 LDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEF 173

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
             AD + +EM +R VFPD  T   LI    + G+++ A+ L D M  + +KP IVTYN++
Sbjct: 174 DGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSV 233

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           + G CK    +KA +++  M    ++P+  S+ ILI G+C +G V EA + + EM  + +
Sbjct: 234 LKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYV 293

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            P +VS + +I  + R G+   A  +L +M   G+ PD + Y  +I GF R  +M +A  
Sbjct: 294 TPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR 353

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +  +M   G +PDV+TYN +L G C+Q R+ D+E +L  M E+G+ PD  T+TTLI+G+ 
Sbjct: 354 VRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYC 413

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
            Q N + A +  D +L++   PD
Sbjct: 414 RQGNFENALQLFDTLLRQRLRPD 436


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 245/480 (51%), Positives = 342/480 (71%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+  CK  + D     + EME++ V+PD VT+N +++A  R G  E A  L++SM  KG
Sbjct: 101 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 160

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKPG+ TYNS++ GLC+ G  D+A EV  EM   G++PD  ++  L+   CR   + EA 
Sbjct: 161 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 220

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ EM  RG+ PD+VSFS LIG+F+R G++D A+ Y REM+  GLVPD V+YT++I G+
Sbjct: 221 KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGF 280

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +AL++RDEM+  GC+ DVVTYNT+LNGLC+ + L +A+ L NEM ERGV PD 
Sbjct: 281 CRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDL 340

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFTTLIHG+C +G ++KAL LFD M  + ++PDIVTYNTLIDG C+ G+++KAN LW D
Sbjct: 341 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 400

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR+I PN+++Y ILI+ +C  G V +AF    EM+ KGI P +++ N+IIKGYCRSG+
Sbjct: 401 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGN 460

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            SK  +FL KM+   V PD I+YNTLI+G+++E+ M  AF L++ ME + + PDV+TYN+
Sbjct: 461 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 520

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GF   G + ++  I  +M  KG+ PDR TY ++INGHV+  N KEAF+ HDEMLQRG
Sbjct: 521 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 176/365 (48%), Gaps = 39/365 (10%)

Query: 159 REMKSAGL----VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
           RE+ S+ L     P   ++ ++I  Y ++    EA +    +L+    +     N +L  
Sbjct: 10  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 69

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           L RA     A D +  +       + YT   ++H +CK    +K   +   M ++ + PD
Sbjct: 70  LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 129

Query: 275 IVTYNTLID-----------------------------------GFCKVGEMEKANKLWA 299
           +VT+N ++D                                   G C+ G  +KA +++ 
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 189

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    ++P+  S+ ILI G+C +G + EA +++ EM  +GIKP LVS + +I  + R G
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 249

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A  +L +M   G+ PD + Y  +I GF R   M  A  +  +M   G +PDV+TYN
Sbjct: 250 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYN 309

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L G C++ R+ D+E +L  M E+G+ PD  T+TTLI+G+  +  L +A +  D ML +
Sbjct: 310 TLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 369

Query: 480 GFVPD 484
              PD
Sbjct: 370 RLRPD 374


>gi|357493977|ref|XP_003617277.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518612|gb|AET00236.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 502

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 263/490 (53%), Positives = 334/490 (68%), Gaps = 94/490 (19%)

Query: 29  DTVTYNTLINAYC-----REGFLEEAFQLM--------------------------NSMS 57
           + V ++ LI  Y      REGF  EAFQL+                          + M 
Sbjct: 76  NVVVFDLLIRTYVQARKLREGF--EAFQLLRKRGFCVSINACNALLGSIVKVRVYLSEME 133

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            KGLKPG+FTYN+LINGLCK+G  + AK VLD+ML +G  PD AT+N +LVES RKE++ 
Sbjct: 134 AKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKEDVW 193

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EAE +F EM + GV PD++SFS++IG+FSRNG+L RAL YF +MK  GLVPD V+YTI+I
Sbjct: 194 EAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 253

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NGYCRN  V  ALK+R+EM+E+ CVMDVVTYNT+LNGLCR KML +AD+LF EM+ERGVF
Sbjct: 254 NGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 313

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PDFYT TTLIHG+CKDGNM KAL+LF+ +T +S                   EMEKA +L
Sbjct: 314 PDFYTLTTLIHGYCKDGNMTKALSLFETITLRS-------------------EMEKAKEL 354

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           W DMISR+I P+YIS+ ILING+CS+G V+E                     ++IKGY R
Sbjct: 355 WRDMISREIFPHYISFSILINGFCSLGLVSE---------------------SLIKGYLR 393

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +G+ SKA++FL+ MVSEGV PD I+YNTLIN                      L+PD++T
Sbjct: 394 AGNVSKANDFLNTMVSEGVPPDCITYNTLIN---------------------RLLPDLVT 432

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN IL GF R GRM ++E++L +MI+KG+NPD+STYT++ING+VS++N+KEAFR HDEML
Sbjct: 433 YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEAFRVHDEML 492

Query: 478 QRGFVPDDAF 487
           QRGFVPDD F
Sbjct: 493 QRGFVPDDKF 502



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 190/377 (50%), Gaps = 44/377 (11%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           I   +++L EME KG+ P   TYN LIN  C+EG  E A  +++ M G G  P   T+N 
Sbjct: 122 IVKVRVYLSEMEAKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNP 181

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           ++    +K     A+ V +EMLQ G+ PD  ++++++    R   +  A   F +M   G
Sbjct: 182 VLVESFRKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVG 241

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + PD V ++ LI  + RN  +  AL    EM     V D V Y  ++NG CR   + +A 
Sbjct: 242 LVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDAD 301

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF----------------NEMLER 234
           ++  EM+E+G   D  T  T+++G C+   +T+A  LF                 +M+ R
Sbjct: 302 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISR 361

Query: 235 GVFPDFYTFTTLIHGHC--------------KDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
            +FP + +F+ LI+G C              + GN++KA +  + M  + + PD +TYNT
Sbjct: 362 EIFPHYISFSILINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNT 421

Query: 281 LID--------------GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
           LI+              GF + G M++A  +   MI + I+P+  +Y  +INGY S  ++
Sbjct: 422 LINRLLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNM 481

Query: 327 TEAFRLWYEMVGKGIKP 343
            EAFR+  EM+ +G  P
Sbjct: 482 KEAFRVHDEMLQRGFVP 498



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 144/319 (45%), Gaps = 49/319 (15%)

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI---- 265
           T+++ L ++K L EA  L   ++ +          +LI     + N N+ + +FD+    
Sbjct: 27  TLIHFLVQSKKLPEAQSLLLRIIRKSGVSRAKVIDSLISSSSSNLNSNQNVVVFDLLIRT 86

Query: 266 ---------------------------------------------MTQKSIKPDIVTYNT 280
                                                        M  K +KP + TYN 
Sbjct: 87  YVQARKLREGFEAFQLLRKRGFCVSINACNALLGSIVKVRVYLSEMEAKGLKPGLFTYNA 146

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           LI+G CK G  E A  +   M+     P+  ++  ++        V EA R++ EM+  G
Sbjct: 147 LINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKEDVWEAERVFNEMLQCG 206

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           + P L+S ++II  + R+G+  +A  +  KM   G+ PD++ Y  LING+ R  ++  A 
Sbjct: 207 VVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGAL 266

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            + ++M  +  V DV+TYN +L G CR   + D++ +   M+E+G+ PD  T TTLI+G+
Sbjct: 267 KVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGY 326

Query: 461 VSQNNLKEAFRFHDEMLQR 479
               N+ +A    + +  R
Sbjct: 327 CKDGNMTKALSLFETITLR 345



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 14/113 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLIN--------------AYCREGFL 46
           ++    +   +  A  FL  M  +GV PD +TYNTLIN               + R G +
Sbjct: 387 LIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLINRLLPDLVTYNAILGGFSRHGRM 446

Query: 47  EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD 99
           +EA  +++ M  KG+ P   TY S+ING   K     A  V DEMLQ G  PD
Sbjct: 447 QEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEAFRVHDEMLQRGFVPD 499


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 181/333 (54%), Positives = 247/333 (74%)

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
           + Y REM+  GLVPD V+YT++I G+CR G + +AL++RDEM+  GC+ DVVTYNT+LNG
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           LC+ + L +A+ L NEM ERGV PD  TFTTLIHG+C +G ++KAL LFD M  + ++PD
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
           IVTYNTLIDG C+ G+++KAN LW DM SR+I PN+++Y ILI+ +C  G V +AF    
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM+ KGI P +++ N+IIKGYCRSG+ SK  +FL KM+   V PD I+YNTLI+G+++E+
Sbjct: 181 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 240

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            M  AF L++ ME + + PDV+TYN+++ GF   G + ++  I  +M  KG+ PDR TY 
Sbjct: 241 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 300

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           ++INGHV+  N KEAF+ HDEMLQRGF PDD F
Sbjct: 301 SMINGHVTAGNSKEAFQLHDEMLQRGFAPDDKF 333



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 201/327 (61%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           +L EM   G+ PD V Y  +I  +CR G + +A ++ + M G G  P V TYN+L+NGLC
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K+ R   A+ +L+EM + G+ PD  T+ TL+   C +  + +A ++F  M  + + PDIV
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TLI    R G LD+A   + +M S  + P++V Y+I+I+ +C  G V +A    DEM
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           + KG + +++TYN+I+ G CR+  +++      +M+   V PD  T+ TLIHG+ K+  M
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 242

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A  L ++M ++ ++PD+VTYN LI+GF   G +++A  ++  M ++ I P+  +Y  +
Sbjct: 243 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 302

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKP 343
           ING+ + G+  EAF+L  EM+ +G  P
Sbjct: 303 INGHVTAGNSKEAFQLHDEMLQRGFAP 329



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 117/327 (35%), Positives = 188/327 (57%)

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L EM   GL PD   Y  ++   CR   MS+A  +  EM   G  PD+V+++TL+    +
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
             +L  A     EM+  G+ PD   +T +I+GYC  G + +AL++ D ML +    D+VT
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT+++G+CR   L +A+DL+++M  R +FP+  T++ LI  HC+ G +  A    D M 
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K I P+I+TYN++I G+C+ G + K  K    M+  K+SP+ I+Y  LI+GY     + 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +AF+L   M  + ++P +V+ N +I G+   G+  +A     KM ++G++PD  +Y ++I
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 388 NGFVREENMDKAFALVSKMENQGLVPD 414
           NG V   N  +AF L  +M  +G  PD
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 180/320 (56%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL P    Y  +I G C+ G    A  V DEM+  G  PD  TYNTLL   C++  + +A
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E +  EM  RGV PD+ +F+TLI  +   G+LD+AL  F  M +  L PD V Y  +I+G
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR G + +A  + D+M  +    + VTY+ +++  C    + +A    +EM+ +G+ P+
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ ++I G+C+ GN++K       M    + PD++TYNTLI G+ K  +M  A KL  
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M   K+ P+ ++Y +LING+   G+V EA  ++ +M  KGI+P   +  ++I G+  +G
Sbjct: 251 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 310

Query: 360 DASKADEFLSKMVSEGVDPD 379
           ++ +A +   +M+  G  PD
Sbjct: 311 NSKEAFQLHDEMLQRGFAPD 330



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 176/309 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+   +  A     EM   G  PD VTYNTL+N  C+E  L +A  L+N M  +G
Sbjct: 22  VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 81

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + T+ +LI+G C +G+ D+A ++ D ML   L PD  TYNTL+   CR+ ++ +A 
Sbjct: 82  VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 141

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M  R + P+ V++S LI      GQ++ A  +  EM + G++P+ + Y  II GY
Sbjct: 142 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 201

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G V +  K   +M+      D++TYNT+++G  +   + +A  L N M +  V PD 
Sbjct: 202 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDV 261

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G    GN+ +A  +F+ M  K I+PD  TY ++I+G    G  ++A +L  +
Sbjct: 262 VTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDE 321

Query: 301 MISRKISPN 309
           M+ R  +P+
Sbjct: 322 MLQRGFAPD 330



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 90/170 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++ C+  +++ A  FL EM  KG+ P+ +TYN++I  YCR G + +  + +  M    
Sbjct: 162 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TYN+LI+G  K+ +   A ++L+ M +  + PD  TYN L+       N+ EA 
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 281

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
            IF +M  +G+ PD  ++ ++I      G    A     EM   G  PD+
Sbjct: 282 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  353 bits (905), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 168/479 (35%), Positives = 290/479 (60%), Gaps = 4/479 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK HK+  A + L EM++ G+ P+ VTY+T+I+ +CR+  ++ A++L   M   G
Sbjct: 48  LINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG 107

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN+L++GLC+ G  D A E+LDEM + GL PD  +Y+TL+   C+   +  A 
Sbjct: 108 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 167

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F + S     PD+V++STLI    + G+LD A   F +M+     PD V +T +++G 
Sbjct: 168 KVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 227

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA ++ + M ++ C  +V+TY+++++GLC+   + +A ++F  M+ RG+ P+ 
Sbjct: 228 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 287

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LIHG C    ++ AL L + MT     PDI+TYNTLIDG CK G   +AN+L+ D
Sbjct: 288 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 347

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M ++  +P+ I+Y  LI G+C +  +  A  L+ +M+ + + P +V+ +T+++GYC +G 
Sbjct: 348 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 407

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A+  L +MV+    PD  +Y +L++GF +   M +A  ++ +M  +G  P+V+TY  
Sbjct: 408 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 467

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++  FCR G+   +  +L  M+  G+ P+  TY +LI G     +L+EA +    ML+R
Sbjct: 468 LIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARK----MLER 522



 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 166/484 (34%), Positives = 270/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK +++  A  +  +M++KG  P+  TYN LIN +C+   +  A+ L+  M   G
Sbjct: 13  MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY+++I+G C++ + D A ++  +M++ G  P+  TYNTLL   CR   M EA 
Sbjct: 73  LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  RG+ PD  S+ TL+    + G++D AL  F +  +    PD V Y+ +I G 
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA K+ ++M E  C  DVVT+  +++GLC+   L EA  +   M +R   P+ 
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 252

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LI G CK G +  A  +F  M  + I+P++VTYN+LI GFC    ++ A  L  +
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 312

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +    P+ I+Y  LI+G C  G   EA RL+ +M  K   P +++ + +I G+C+   
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      M+ + V PD ++++TL+ G+     +D A  L+ +M      PDV TY  
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+ GRM ++  +L RM ++G  P+  TYT LI+          A++  +EM+  G
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492

Query: 481 FVPD 484
             P+
Sbjct: 493 VQPN 496



 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 162/456 (35%), Positives = 257/456 (56%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           + +T+  +I+  C+   L EA      M  KG  P  +TYN LING CK  +  RA  +L
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            EM + GL+P+  TY+T++   CR+  +  A ++F +M   G  P++V+++TL+    RN
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G +D A     EM+  GL PD   Y  ++ G C+ G +  ALK+ ++     C  DVV Y
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           +T++ GLC+   L EA  LF +M E    PD  TFT L+ G CK   + +A  + + M  
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           ++  P+++TY++LIDG CK G++  A +++  MI R I PN ++Y  LI+G+C    V  
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  EM   G  P +++ NT+I G C++G A +A+     M ++  +PD I+Y+ LI 
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           GF + E +D A  L   M  Q ++PDV+T++ ++ G+C  G + D+E +L  M+    +P
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D  TYT+L++G      + EA R    M +RG  P+
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPN 461



 Score =  319 bits (817), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 284/521 (54%), Gaps = 37/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+  K+D+A     +M + G  P+ VTYNTL++  CR G ++EA++L++ M  +G
Sbjct: 83  VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 142

Query: 61  LKPGVFTYNSL-----------------------------------INGLCKKGRCDRAK 85
           L+P  F+Y++L                                   I GLCK GR D A 
Sbjct: 143 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEAC 202

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++ ++M +    PD  T+  L+   C+ + + EA+++   M  R   P+++++S+LI   
Sbjct: 203 KLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 262

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + GQ+  A   F+ M   G+ P+ V Y  +I+G+C    V  AL + +EM   GC+ D+
Sbjct: 263 CKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDI 322

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TYNT+++GLC+     EA+ LF +M  +   PD  T++ LI G CK   ++ A  LFD 
Sbjct: 323 ITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 382

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++++ PD+VT++TL++G+C  G ++ A +L  +M++   SP+  +Y  L++G+C +G 
Sbjct: 383 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 442

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA R+   M  +G +P +V+   +I  +CR+G  + A + L +MV  GV P+ I+Y +
Sbjct: 443 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRS 502

Query: 386 LINGFVREENMDKAFALVSKME-NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           LI GF    ++++A  ++ ++E ++    D+  Y V++ G CR GRM  +  +L  + + 
Sbjct: 503 LIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS 562

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM-LQRGFVPD 484
           G  P    Y  LI G      L +A    +EM L R   P+
Sbjct: 563 GTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPN 603



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 186/375 (49%), Gaps = 37/375 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  A+     M  +G+ P+ VTYN+LI+ +C    ++ A  LM  M+  G
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN+LI+GLCK GR   A  +  +M     +PD  TY+ L+   C+ E +  A 
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M ++ V PD+V+FSTL+  +   G +D A     EM ++   PD   YT +++G+
Sbjct: 378 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 437

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA ++   M ++GC  +VVTY  +++  CRA   T A  L  EM+  GV P+ 
Sbjct: 438 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNV 497

Query: 241 YTFTTLIHGHC------------------------------------KDGNMNKALNLFD 264
            T+ +LI G C                                    + G M+ AL L +
Sbjct: 498 ITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 557

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM-ISRKISPNYISYGILINGYCSM 323
            + Q    P    Y  LI G C+  E+ KA ++  +M +SRK  PN  +Y  +I      
Sbjct: 558 AIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELARE 617

Query: 324 GHVTEAFRLWYEMVG 338
           G   EA  L  E++G
Sbjct: 618 GRHEEANALADELLG 632



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 164/342 (47%), Gaps = 37/342 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C  + +DSA + + EM   G  PD +TYNTLI+  C+ G   EA +L   M  K 
Sbjct: 293 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL-------------- 106
             P V TY+ LI G CK  R D A+ + D+ML+  + PD  T++TL              
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412

Query: 107 -LVES--------------------CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            L+E                     C+   M EA  +   M++RG  P++V+++ LI  F
Sbjct: 413 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 472

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM-LEKGCVMD 204
            R G+   A     EM   G+ P+ + Y  +I G+C  G + EA KM + +  ++ C  D
Sbjct: 473 CRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKAD 532

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +  Y  +++GLCR   ++ A +L   + + G  P    +  LI G C+   + KA+ + +
Sbjct: 533 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 592

Query: 265 IMT-QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
            MT  +  +P+   Y  +I    + G  E+AN L  +++  K
Sbjct: 593 EMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGNK 634


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 168/479 (35%), Positives = 290/479 (60%), Gaps = 1/479 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK HK+  A + L EM++ G+ P+ VTY+T+I+ +CR+  ++ A++L   M   G
Sbjct: 167 LINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG 226

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN+L++GLC+ G  D A E+LDEM + GL PD  +Y+TL+   C+   +  A 
Sbjct: 227 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 286

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F + S     PD+V++STLI    + G+LD A   F +M+     PD V +T +++G 
Sbjct: 287 KVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 346

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA ++ + M ++ C  +V+TY+++++GLC+   + +A ++F  M+ RG+ P+ 
Sbjct: 347 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 406

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LIHG C    ++ AL L + MT     PDI+TYNTLIDG CK G   +AN+L+ D
Sbjct: 407 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 466

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M ++  +P+ I+Y  LI G+C +  +  A  L+ +M+ + + P +V+ +T+++GYC +G 
Sbjct: 467 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 526

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A+  L +MV+    PD  +Y +L++GF +   M +A  ++ +M  +G  P+V+TY  
Sbjct: 527 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 586

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++  FCR G+   +  +L  M+  G+ P+  TY +LI G     +L+EA +   E L+R
Sbjct: 587 LIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKIL-ERLER 644



 Score =  331 bits (848), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 167/484 (34%), Positives = 270/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK +++  A  +  +M++KG  P+  TYN LIN +C+   +  A+ L+  M   G
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY+++I+G C++ + D A ++  +M++ G  P+  TYNTLL   CR   M EA 
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  RG+ PD  S+ TL+    + G++D AL  F +  +    PD V Y+ +I G 
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA K+ ++M E  C  DVVT+  +++GLC+   L EA  +   M +R   P+ 
Sbjct: 312 CKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 371

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LI G CK G +  A  +F  M  + I+P++VTYN+LI GFC    ++ A  L  +
Sbjct: 372 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 431

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +    P+ I+Y  LI+G C  G   EA RL+ +M  K   P +++ + +I G+C+   
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      M+ + V PD ++++TL+ G+     +D A  L+ +M      PDV TY  
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+ GRM ++  +L RM ++G  P+  TYT LI+          A+R  +EM+  G
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611

Query: 481 FVPD 484
             P+
Sbjct: 612 VQPN 615



 Score =  330 bits (845), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 177/516 (34%), Positives = 274/516 (53%), Gaps = 32/516 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR------------------ 42
           ++  LCK   +D A   L EM + G  PD   YN +I+A C+                  
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK 124

Query: 43  ---------EGF-----LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
                    +G      L EA      M  KG  P  +TYN LING CK  +  RA  +L
Sbjct: 125 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 184

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            EM + GL+P+  TY+T++   CR+  +  A ++F +M   G  P++V+++TL+    RN
Sbjct: 185 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 244

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G +D A     EM+  GL PD   Y  ++ G C+ G +  ALK+ ++     C  DVV Y
Sbjct: 245 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 304

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           +T++ GLC+A  L EA  LF +M E    PD  TFT L+ G CK   + +A  + + M  
Sbjct: 305 STLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           ++  P+++TY++LIDG CK G++  A +++  MI R I PN ++Y  LI+G+C    V  
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 424

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  EM   G  P +++ NT+I G C++G A +A+     M ++  +PD I+Y+ LI 
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 484

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           GF + E +D A  L   M  Q ++PDV+T++ ++ G+C  G + D+E +L  M+    +P
Sbjct: 485 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 544

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D  TYT+L++G      + EA R    M +RG  P+
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPN 580



 Score =  320 bits (821), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 164/502 (32%), Positives = 275/502 (54%), Gaps = 32/502 (6%)

Query: 15  KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLING 74
           + F    +Q+G   +  TYN L  A  R   ++E   ++ +    G+ P VFTY  +I G
Sbjct: 9   RFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQG 68

Query: 75  LCKKGRCDRAKEVLDEMLQMGLSPDTATYN------------------------------ 104
           LCK G  D+A E+L+EM + G  PD A YN                              
Sbjct: 69  LCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVIT 128

Query: 105 -TLLVES-CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
            T++++  C+   + EA   F +M ++G  P+  +++ LI  F +  ++ RA +  +EMK
Sbjct: 129 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 188

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
            +GL P+ V Y+ +I+G+CR   V  A K+  +M+E GC+ ++VTYNT+L+GLCR  ++ 
Sbjct: 189 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 248

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           EA +L +EM ERG+ PD +++ TL+ G CK G ++ AL +F+  +     PD+V Y+TLI
Sbjct: 249 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 308

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            G CK G +++A KL+  M      P+ +++  L++G C    + EA ++   M  +   
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P +++ +++I G C++G    A E   +M+  G++P+ ++YN+LI+GF     +D A  L
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           + +M   G +PD+ITYN ++ G C+ GR  ++  +   M  K  NPD  TY+ LI G   
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 488

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
              +  A    D+ML++  +PD
Sbjct: 489 LERIDMARTLFDDMLKQAVLPD 510



 Score =  318 bits (815), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 283/521 (54%), Gaps = 37/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+  K+D+A     +M + G  P+ VTYNTL++  CR G ++EA++L++ M  +G
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261

Query: 61  LKPGVFTYNSL-----------------------------------INGLCKKGRCDRAK 85
           L+P  F+Y++L                                   I GLCK GR D A 
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEAC 321

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++ ++M +    PD  T+  L+   C+ + + EA+++   M  R   P+++++S+LI   
Sbjct: 322 KLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 381

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + GQ+  A   F+ M   G+ P+ V Y  +I+G+C    V  AL + +EM   GC+ D+
Sbjct: 382 CKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDI 441

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TYNT+++GLC+     EA+ LF +M  +   PD  T++ LI G CK   ++ A  LFD 
Sbjct: 442 ITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 501

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++++ PD+VT++TL++G+C  G ++ A +L  +M++   SP+  +Y  L++G+C +G 
Sbjct: 502 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 561

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA R+   M  +G +P +V+   +I  +CR+G  + A   L +MV  GV P+ I+Y +
Sbjct: 562 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRS 621

Query: 386 LINGFVREENMDKAFALVSKME-NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           LI GF    ++++A  ++ ++E ++    D+  Y V++ G CR GRM  +  +L  + + 
Sbjct: 622 LIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS 681

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM-LQRGFVPD 484
           G  P    Y  LI G      L +A    +EM L R   P+
Sbjct: 682 GTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPN 722



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 186/375 (49%), Gaps = 37/375 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  A+     M  +G+ P+ VTYN+LI+ +C    ++ A  LM  M+  G
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN+LI+GLCK GR   A  +  +M     +PD  TY+ L+   C+ E +  A 
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M ++ V PD+V+FSTL+  +   G +D A     EM ++   PD   YT +++G+
Sbjct: 497 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 556

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA ++   M ++GC  +VVTY  +++  CRA   T A  L  EM+  GV P+ 
Sbjct: 557 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNV 616

Query: 241 YTFTTLIHGHC------------------------------------KDGNMNKALNLFD 264
            T+ +LI G C                                    + G M+ AL L +
Sbjct: 617 ITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 676

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM-ISRKISPNYISYGILINGYCSM 323
            + Q    P    Y  LI G C+  E+ KA ++  +M +SRK  PN  +Y  +I      
Sbjct: 677 AIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELARE 736

Query: 324 GHVTEAFRLWYEMVG 338
           G   EA  L  E++G
Sbjct: 737 GRHEEANALADELLG 751



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 164/342 (47%), Gaps = 37/342 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C  + +DSA + + EM   G  PD +TYNTLI+  C+ G   EA +L   M  K 
Sbjct: 412 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 471

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL-------------- 106
             P V TY+ LI G CK  R D A+ + D+ML+  + PD  T++TL              
Sbjct: 472 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 531

Query: 107 -LVES--------------------CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            L+E                     C+   M EA  +   M++RG  P++V+++ LI  F
Sbjct: 532 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 591

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM-LEKGCVMD 204
            R G+   A     EM   G+ P+ + Y  +I G+C  G + EA K+ + +  ++ C  D
Sbjct: 592 CRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKAD 651

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +  Y  +++GLCR   ++ A +L   + + G  P    +  LI G C+   + KA+ + +
Sbjct: 652 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 711

Query: 265 IMT-QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
            MT  +  +P+   Y  +I    + G  E+AN L  +++  K
Sbjct: 712 EMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGNK 753



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 3/147 (2%)

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           +G    + + N + +   R+    +    L      G+ P+  +Y  +I G  +  ++DK
Sbjct: 18  QGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDK 77

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  L+ +M   G VPD   YN ++   C+  R     L  +R +E     +  T+T +I+
Sbjct: 78  ACELLEEMRESGPVPDAAIYNFVIHALCK-ARNTAKALDYFRSME--CEKNVITWTIMID 134

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G    N L EA  +  +M ++G VP++
Sbjct: 135 GLCKANRLPEATTYFAKMKKKGTVPNE 161



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%)

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           + QG   +V TYN +     R  R+ ++  IL      G+ P+  TY  +I G     +L
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 467 KEAFRFHDEMLQRGFVPDDAF 487
            +A    +EM + G VPD A 
Sbjct: 76  DKACELLEEMRESGPVPDAAI 96


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  352 bits (903), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 175/484 (36%), Positives = 280/484 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+ + +D A     +M + G+ PD +T+ TLIN  C EG ++ A +L N M   G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V +YN+LINGLC  G  + A  V  +M Q G  P+  TYNT++   C+   +++A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   EM  RG+ PD +++++++      GQL+ A   F+ M+  G  PD V Y III+  
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++  V +A     EM+++G   DVVTY TIL+GLC    L EA  LF +M ++G  PD 
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T+I   CKD  +N A+     M  + I P+ VTY+T++ GFC +G++++A +L+ +
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R + PN +++ IL++G C  G V+EA  ++  M  KG++P + + N ++ GYC    
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +    MV +G  PD  SYN LING+     MDKA AL+++M  + L P+ +TYN 
Sbjct: 494 MNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+ G C  GR+ D++ +  +M   G+ P   TY+ L+NG     +L EA +    M ++ 
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKK 613

Query: 481 FVPD 484
             PD
Sbjct: 614 LEPD 617



 Score =  323 bits (828), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 164/483 (33%), Positives = 274/483 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N +C + KI  A     EM + G  PD ++YNTLIN  C  G    A  +   M   G
Sbjct: 169 LINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNG 228

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TYN++I+ LCK    + A + L EM+  G+ PD  TYN+++   C    ++EA 
Sbjct: 229 CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEAT 288

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M + G  PD+V+++ +I    ++  ++ A  +  EM   G+ PD V YT I++G 
Sbjct: 289 RLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA+++  +M +KGC  DVV YNTI++ LC+ +++ +A +  +EM++RG+ P+ 
Sbjct: 349 CYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNA 408

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++T++HG C  G +++A  LF  M  +++ P+ +T++ L+DG C+ G + +A  ++  
Sbjct: 409 VTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFET 468

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + PN  +Y  L+NGYC    + EA +++  MVGKG  P L S N +I GYC S  
Sbjct: 469 MTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRR 528

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L++M  + + P++++YNT++ G      +  A  L  KM + G++P ++TY++
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C+ G + ++  +   M EK L PD   YT LI G      L+ A     ++   G
Sbjct: 589 LLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG 648

Query: 481 FVP 483
             P
Sbjct: 649 IQP 651



 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 273/472 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC     + A     +MEQ G  P+ VTYNT+I++ C++  + +A   ++ M G+G
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TYNS+++GLC  G+ + A  +   M Q G  PD  TYN ++    +   +++A 
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   EM  +G+ PD+V+++T++      GQL+ A+  F++M+  G  PD V Y  II+  
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  V +A++   EM+++G   + VTY+TIL+G C    L EA  LF EM+ R V P+ 
Sbjct: 384 CKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNT 443

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ L+ G C++G +++A  +F+ MT+K ++P+I TYN L++G+C   +M +A K++  
Sbjct: 444 LTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEI 503

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +  +P+  SY ILINGYC+   + +A  L  +M  K + P  V+ NTI+KG C  G 
Sbjct: 504 MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E   KM S G+ P  ++Y+ L+NG  +  ++D+A  L   M+ + L PD+I Y +
Sbjct: 564 LLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTI 623

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           ++ G    G++  ++ +  ++   G+ P   TY  +I G + +    EA+  
Sbjct: 624 LIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675



 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 252/439 (57%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +++A      M+    +P +  +   +  + K  +      + ++M   G++    + N 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   CR  ++  A  ++ +M + G+ PD+++F+TLI      G++  A+  + EM  +G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             PD + Y  +ING C +G    A+ +  +M + GC  +VVTYNTI++ LC+ +++ +A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           D  +EM+ RG+ PD  T+ +++HG C  G +N+A  LF  M Q   KPD+VTYN +ID  
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
            K   +  A    ++M+ + I P+ ++Y  +++G C +G + EA RL+ +M  KG KP +
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ NTII   C+    + A EFLS+MV  G+ P++++Y+T+++GF     +D+A  L  +
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  + ++P+ +T+++++ G C++G + ++  +   M EKG+ P+  TY  L+NG+  +  
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           + EA +  + M+ +G  PD
Sbjct: 494 MNEARKVFEIMVGKGCAPD 512



 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 136/405 (33%), Positives = 230/405 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LC   +++ A      MEQ G  PD VTYN +I++  ++  + +A   ++ M  +G
Sbjct: 274 IVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQG 333

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY ++++GLC  G+ + A  +  +M Q G  PD   YNT++   C+   +++A 
Sbjct: 334 IPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAM 393

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   EM  RG+ P+ V++ST++  F   GQLD A   F+EM    ++P+ + ++I+++G 
Sbjct: 394 EFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGL 453

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  + + M EKG   ++ TYN ++NG C    + EA  +F  M+ +G  PD 
Sbjct: 454 CQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDL 513

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  LI+G+C    M+KA  L   M+ K + P+ VTYNT++ G C VG +  A +L+  
Sbjct: 514 HSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKK 573

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  + P  ++Y IL+NG C  GH+ EA +L+  M  K ++P ++    +I+G    G 
Sbjct: 574 MCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGK 633

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
              A    SK+ ++G+ P   +YN +I G ++E   D+A+ L  K
Sbjct: 634 LEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 204/370 (55%)

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           ++ +A   F  M+R    P IV F   +G  ++  Q    +    +M   G+        
Sbjct: 73  SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+IN  CR   V  A+ +  +M + G   DV+T+ T++NG+C    +  A +L+NEM+  
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  PD  ++ TLI+G C  GN N A+++F  M Q   KP++VTYNT+ID  CK   +  A
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
               ++M+ R I P+ I+Y  +++G C +G + EA RL+  M   G KP +V+ N II  
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDS 312

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             +    + A +FLS+MV +G+ PD ++Y T+++G      +++A  L  KME +G  PD
Sbjct: 313 LYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPD 372

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V+ YN I+   C+   ++D+   L  M+++G+ P+  TY+T+++G  +   L EA +   
Sbjct: 373 VVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFK 432

Query: 475 EMLQRGFVPD 484
           EM+ R  +P+
Sbjct: 433 EMVGRNVMPN 442


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  341 bits (875), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 184/509 (36%), Positives = 286/509 (56%), Gaps = 23/509 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  A+  L +M+ +G+ P+  TYN L+  YC+ G+L+EA  ++  M+   
Sbjct: 249 ILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V+TYN LINGLC +GR + A ++ DEM  + L PD  +YNTL+        +SEA 
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS +GV P+ V+ + ++  + + G++D A     +M+ +G  PD V Y  +INGY
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA +  DEM  K   MD VT NTIL  LCR K L EA  L +   +RG F D 
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI G+ KDGN+++AL L+D M +K I P  VTYN +I G C+ G+ E+A     +
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++   + P+  +Y  +++GYC  G V +AF+   +MV    KP + +CN +++G C  G 
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGV 608

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +  +  VS+G   D+++YNTLI    +E  +D AF L+S+ME + L PD  TYN 
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDR-----------------------STYTTLI 457
           I+T     GR+ ++E  + +M+EKG  PD+                         Y+  I
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWI 728

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
               ++   K+A R   E  Q+G   D +
Sbjct: 729 KELCTEGKYKDAMRIFGESKQKGITVDKS 757



 Score =  294 bits (753), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 164/482 (34%), Positives = 255/482 (52%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C ++K   A  FL  M +    PD VTYNT+++  C++G L +A  L+  M  +GL P  
Sbjct: 219 CLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNR 278

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TYN L+ G CK G    A  V++ M Q  L PD  TYN L+   C +  + EA ++  E
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M    + PD+VS++TLI       ++  A     EM   G+ P+ V + I++  YC+ G 
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + +A     +M E G   D VTYNT++NG C+A  + EA    +EM  + +  D  T  T
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           ++   C++  + +A  L     ++    D V+Y TLI G+ K G +++A KLW +M  ++
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I P+ ++Y  +I G C  G   +A     E++  G+ P   + NTI+ GYCR GD  KA 
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +F +KMV     PD  + N L+ G   E  ++KA  L +   ++G   D +TYN ++T  
Sbjct: 579 QFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C++GR+ D+  +L  M EK L PD  TY  +I        ++EA  F  +ML++G +PD 
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQ 698

Query: 486 AF 487
             
Sbjct: 699 VL 700



 Score =  291 bits (744), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 260/460 (56%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK---KGRCDRA 84
           P     +T I AY + G    AFQ+   M    L+P + T N+L+N L +         +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           +E  ++ +++G+ P+  T+N ++   C +    +A E    M +   +PD V+++T++  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             + G+L  A     +MKS GL+P+   Y I++ GYC+ G++ EA  + + M +   + D
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           V TYN ++NGLC    + EA  L +EM    + PD  ++ TLI+G  +   +++A  L +
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M++K +KP+ VT+N ++  +CK G+M+ A+     M     SP+ ++Y  LINGYC  G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           ++ EAFR   EM  K +K   V+ NTI++  CR     +A + LS     G   D +SY 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI G+ ++ N+D+A  L  +M+ + ++P  +TYN I+ G C+ G+   +   L  ++E 
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL PD +TY T+++G+  + ++++AF+FH++M++  F PD
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 226/405 (55%), Gaps = 4/405 (0%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           DR  ++   +L++  SP  A  +T +    +      A +IF +M R  + P++++ +TL
Sbjct: 118 DRRHDLHLSILRLT-SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTL 176

Query: 142 IGIFSR---NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           +    R   +  +  +   F +    G+VP+   + I+I GYC      +A++  + M +
Sbjct: 177 LNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGK 236

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
             C  D VTYNTIL+ LC+   L +A DL  +M  RG+ P+  T+  L++G+CK G + +
Sbjct: 237 YNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A N+ ++MTQ ++ PD+ TYN LI+G C  G +E+A KL  +M + K+ P+ +SY  LIN
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G      ++EAF+L  EM  KG+KP  V+ N ++K YC+ G    A   ++KM   G  P
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D ++YNTLING+ +  NM +AF  + +M  + +  D +T N IL   CR+ ++ ++  +L
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
               ++G   D  +Y TLI G+    N+  A +  DEM ++  +P
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 124/242 (51%), Gaps = 23/242 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  K + A   L E+ + G+ PD  TYNT+++ YCREG +E+AFQ  N M    
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP VFT N L+ GLC +G  ++A ++ +  +  G + DT TYNTL+   C++  + +A 
Sbjct: 589 FKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL-------- 172
            +  EM  + + PD  +++ +I   + +G++  A  +  +M   G +PD VL        
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETV 708

Query: 173 ---------------YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
                          Y+  I   C  G   +A+++  E  +KG  +D  TY  +++GL +
Sbjct: 709 VTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768

Query: 218 AK 219
            +
Sbjct: 769 RR 770



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 38/221 (17%)

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT----------- 350
           I R  SP+       I  Y   G    AF+++ +M    ++P L++CNT           
Sbjct: 127 ILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSS 186

Query: 351 ---------------------------IIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
                                      +I GYC       A EFL+ M      PD+++Y
Sbjct: 187 HSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTY 246

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           NT+++   ++  +  A  L+  M+++GL+P+  TYN+++ G+C+ G + ++  ++  M +
Sbjct: 247 NTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             L PD  TY  LING  ++  ++EAF+  DEM     +PD
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  341 bits (875), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 184/509 (36%), Positives = 286/509 (56%), Gaps = 23/509 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK  ++  A+  L +M+ +G+ P+  TYN L+  YC+ G+L+EA  ++  M+   
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V+TYN LINGLC +GR + A ++ DEM  + L PD  +YNTL+        +SEA 
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS +GV P+ V+ + ++  + + G++D A     +M+ +G  PD V Y  +INGY
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA +  DEM  K   MD VT NTIL  LCR K L EA  L +   +RG F D 
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI G+ KDGN+++AL L+D M +K I P  VTYN +I G C+ G+ E+A     +
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++   + P+  +Y  +++GYC  G V +AF+   +MV    KP + +CN +++G C  G 
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGM 608

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +  +  VS+G   D+++YNTLI    +E  +D AF L+S+ME + L PD  TYN 
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDR-----------------------STYTTLI 457
           I+T     GR+ ++E  + +M+EKG  P +                         Y+  I
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWI 728

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
               ++   K+A R   E  Q+G   D +
Sbjct: 729 KELCTEGKYKDAMRIFGESKQKGITVDKS 757



 Score =  294 bits (752), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 164/478 (34%), Positives = 255/478 (53%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C ++K   A  FL  M +    PD VTYNT+++A C++G L +A  L+  M  +GL P  
Sbjct: 219 CLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNR 278

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TYN L+ G CK G    A  V++ M Q  L PD  TYN L+   C +  + EA ++  E
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M    + PD+VS++TLI       ++  A     EM   G+ P+ V + I++  YC+ G 
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + +A     +M E G   D VTYNT++NG C+A  + EA    +EM  + +  D  T  T
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           ++   C++  + +A  L     ++    D V+Y TLI G+ K G +++A KLW +M  ++
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I P+ ++Y  +I G C  G   +A     E++  G+ P   + NTI+ GYCR GD  KA 
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +F +KMV     PD  + N L+ G   E  ++KA  L +   ++G   D +TYN ++T  
Sbjct: 579 QFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           C++GR+ D+  +L  M EK L PD  TY  +I        ++EA  F  +ML++G +P
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696



 Score =  290 bits (743), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 260/460 (56%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK---KGRCDRA 84
           P     +T I AY + G    AFQ+   M    L+P + T N+L+N L +         +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           +E  ++ +++G+ P+  T+N ++   C +    +A E    M +   +PD V+++T++  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             + G+L  A     +MKS GL+P+   Y I++ GYC+ G++ EA  + + M +   + D
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           V TYN ++NGLC    + EA  L +EM    + PD  ++ TLI+G  +   +++A  L +
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M++K +KP+ VT+N ++  +CK G+M+ A+     M     SP+ ++Y  LINGYC  G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           ++ EAFR   EM  K +K   V+ NTI++  CR     +A + LS     G   D +SY 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI G+ ++ N+D+A  L  +M+ + ++P  +TYN I+ G C+ G+   +   L  ++E 
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL PD +TY T+++G+  + ++++AF+FH++M++  F PD
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 226/405 (55%), Gaps = 4/405 (0%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           DR  ++   +L++  SP  A  +T +    +      A +IF +M R  + P++++ +TL
Sbjct: 118 DRRHDLHLSILRLT-SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTL 176

Query: 142 IGIFSR---NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           +    R   +  +  +   F +    G+VP+   + I+I GYC      +A++  + M +
Sbjct: 177 LNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGK 236

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
             C  D VTYNTIL+ LC+   L +A DL  +M  RG+ P+  T+  L++G+CK G + +
Sbjct: 237 YNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A N+ ++MTQ ++ PD+ TYN LI+G C  G +E+A KL  +M + K+ P+ +SY  LIN
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G      ++EAF+L  EM  KG+KP  V+ N ++K YC+ G    A   ++KM   G  P
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D ++YNTLING+ +  NM +AF  + +M  + +  D +T N IL   CR+ ++ ++  +L
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
               ++G   D  +Y TLI G+    N+  A +  DEM ++  +P
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 123/242 (50%), Gaps = 23/242 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  K + A   L E+ + G+ PD  TYNT+++ YCREG +E+AFQ  N M    
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP VFT N L+ GLC +G  ++A ++ +  +  G + DT TYNTL+   C++  + +A 
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL-------- 172
            +  EM  + + PD  +++ +I   + +G++  A  +  +M   G +P  VL        
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETV 708

Query: 173 ---------------YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
                          Y+  I   C  G   +A+++  E  +KG  +D  TY  +++GL +
Sbjct: 709 VTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768

Query: 218 AK 219
            +
Sbjct: 769 RR 770



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 38/221 (17%)

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT----------- 350
           I R  SP+       I  Y   G    AF+++ +M    ++P L++CNT           
Sbjct: 127 ILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSS 186

Query: 351 ---------------------------IIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
                                      +I GYC       A EFL+ M      PD+++Y
Sbjct: 187 HSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTY 246

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           NT+++   ++  +  A  L+  M+++GL+P+  TYN+++ G+C+ G + ++  ++  M +
Sbjct: 247 NTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             L PD  TY  LING  ++  ++EAF+  DEM     +PD
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  340 bits (872), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 171/464 (36%), Positives = 271/464 (58%), Gaps = 20/464 (4%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EME+ G  P+ VTYNTLI+AYC+ G ++EAF L+ SMS KG++P + +YN +INGLC++G
Sbjct: 239 EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG 298

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
               A E+L+EM   G +PD  TYNTLL   C++ N  +A  I  EM R GV+P +V+++
Sbjct: 299 SMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYT 358

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI    +   L+RA+ +F +M+  GL P+   YT +I+G+ R G + EA ++ +EM E 
Sbjct: 359 ALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES 418

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G    VVTYN  ++G C  + + EA  +  EM+E+G+ PD  +++T+I G C+ G +++A
Sbjct: 419 GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRA 478

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +   M +K + PD VTY++LI G C++  + +A  L  +M+   + P+  +Y  LIN 
Sbjct: 479 FQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINA 538

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           YC  G + +A  L  EM+ KG  P  V+ + +I G  +     +A   L K++ E   P 
Sbjct: 539 YCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 598

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            ++Y+TLI      EN        S +E + +V        ++ GFC +G MH+++ +  
Sbjct: 599 DVTYDTLI------EN-------CSNIEFKSVV-------ALIKGFCMKGLMHEADRVFE 638

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            M+E+   P  + Y  +I+GH    NL +AF  + EM+  GFVP
Sbjct: 639 SMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVP 682



 Score =  308 bits (789), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 162/475 (34%), Positives = 267/475 (56%), Gaps = 3/475 (0%)

Query: 14  AKMFLCEMEQKGVY-PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLI 72
           + +F C  +   VY   +  ++ ++ +Y     +++A   +N     G  PGV +YNS++
Sbjct: 125 SSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVL 184

Query: 73  NGLCK-KGRCD-RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           + + + +G     A+EV  EM++  +SP+  TYN L+   C    + +    F EM R G
Sbjct: 185 DAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNG 244

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P++V+++TLI  + + G++D A    + M S G+ P+ + Y +IING CR G + EA 
Sbjct: 245 CLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAW 304

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++ +EM  KG   D VTYNT+LNG C+     +A  +  EM+  GV P   T+T LI+  
Sbjct: 305 EILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 364

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK  N+N+A+  FD M  + ++P+  TY TLIDGF + G + +A ++  +M     SP+ 
Sbjct: 365 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 424

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y   I+G+C +  + EA  +  EMV KG+ P +VS +TII G+CR G+  +A +   +
Sbjct: 425 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 484

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV +GV PD+++Y++LI G      + +A  L  +M + GL PD  TY  ++  +C +G 
Sbjct: 485 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 544

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++ +  +   MI KG  PD  TY+ LING   Q   +EA R   +++    VP D
Sbjct: 545 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 599



 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 155/464 (33%), Positives = 239/464 (51%), Gaps = 50/464 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC++  +  A   L EM  KG  PD VTYNTL+N YC+EG   +A  +   M   G
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY +LIN +CK    +RA E  D+M   GL P+  TY TL+    R+  ++EA 
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM+  G +P +V+++  I       +++ AL   +EM   GL PD V Y+ II+G+
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A +M+ EM+EKG   D VTY++++ GLC  + LTEA DL  EML+ G+ PD 
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 529

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG---------------- 284
           +T+TTLI+ +C +G++NKAL+L D M  K   PD VTY+ LI+G                
Sbjct: 530 FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFK 589

Query: 285 ----------------------------------FCKVGEMEKANKLWADMISRKISPNY 310
                                             FC  G M +A++++  M+ R   P  
Sbjct: 590 LIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGE 649

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
             Y ++I+G+C  G++ +AF L+ EM+  G  P  V+  T+IK   + G   +  E +  
Sbjct: 650 AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 709

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            +      ++     L+    +E NM+    +++ M   GL+P+
Sbjct: 710 TLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 17/186 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLI---------------NAYCREGF 45
           ++N L K  +   AK  L ++  +   P  VTY+TLI                 +C +G 
Sbjct: 570 LINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGL 629

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           + EA ++  SM  +  KPG   YN +I+G C+ G   +A  +  EM+  G  P T T  T
Sbjct: 630 MHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVIT 689

Query: 106 LLVESCRKENMSEA-EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+++  KE M+E   E+  +  R     +      L+ I  + G ++  L    +M   
Sbjct: 690 -LIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKD 748

Query: 165 GLVPDN 170
           GL+P++
Sbjct: 749 GLLPNS 754


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  338 bits (867), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 172/483 (35%), Positives = 276/483 (57%), Gaps = 20/483 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   ++        EME+ G  P+ VTYNTLI+AYC+ G ++EAF L+ SMS KG
Sbjct: 16  LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + +YN +INGLC++G    A E+L+EM   G +PD  TYNTLL   C++ N  +A 
Sbjct: 76  MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM R GV+P +V+++ LI    +   L+RA+ +F +M+  GL P+   YT +I+G+
Sbjct: 136 VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGF 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G + EA ++ +EM E G    VVTYN  ++G C  + + EA  +  EM+E+G+ PD 
Sbjct: 196 SRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDV 255

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++T+I G C+ G +++A  +   M +K + PD VTY++LI G C++  + +A  L  +
Sbjct: 256 VSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQE 315

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P+  +Y  LIN YC  G + +A  L  EM+ KG  P  V+ + +I G  +   
Sbjct: 316 MLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQAR 375

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L K++ E   P  ++Y+TLI      EN        S +E + +V        
Sbjct: 376 TREAKRLLFKLIYEESVPSDVTYDTLI------EN-------CSNIEFKSVV-------A 415

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC +G MH+++ +   M+E+   P  + Y  +I+GH    NL +AF  + EM+  G
Sbjct: 416 LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 475

Query: 481 FVP 483
           FVP
Sbjct: 476 FVP 478



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/395 (36%), Positives = 227/395 (57%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M++  +SP+  TYN L+   C    + +    F EM R G  P++V+++TLI  + + G+
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D A    + M S G+ P+ + Y +IING CR G + EA ++ +EM  KG   D VTYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +LNG C+     +A  +  EM+  GV P   T+T LI+  CK  N+N+A+  FD M  + 
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           ++P+  TY TLIDGF + G + +A ++  +M     SP+ ++Y   I+G+C +  + EA 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            +  EMV KG+ P +VS +TII G+CR G+  +A +   +MV +GV PD+++Y++LI G 
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
                + +A  L  +M + GL PD  TY  ++  +C +G ++ +  +   MI KG  PD 
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            TY+ LING   Q   +EA R   +++    VP D
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 395



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/444 (33%), Positives = 228/444 (51%), Gaps = 85/444 (19%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A CK  +ID A   L  M  KG+ P+ ++YN +IN  CREG ++EA++++  M  KG
Sbjct: 51  LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 110

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN+L+NG CK+G   +A  +  EM++ G+SP   TY  L+   C+  N++ A 
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 170

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNG------------------------------- 149
           E F +M  RG+ P+  +++TLI  FSR G                               
Sbjct: 171 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 230

Query: 150 ----QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
               +++ AL   +EM   GL PD V Y+ II+G+CR G +  A +M+ EM+EKG   D 
Sbjct: 231 CVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDA 290

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY++++ GLC  + LTEA DL  EML+ G+ PD +T+TTLI+ +C +G++NKAL+L D 
Sbjct: 291 VTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE 350

Query: 266 MTQKSIKPDIVTYNTLIDG----------------------------------------- 284
           M  K   PD VTY+ LI+G                                         
Sbjct: 351 MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEF 410

Query: 285 ---------FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
                    FC  G M +A++++  M+ R   P    Y ++I+G+C  G++ +AF L+ E
Sbjct: 411 KSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKE 470

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSG 359
           M+  G  P  V+  T+IK   + G
Sbjct: 471 MIHSGFVPHTVTVITLIKALFKEG 494



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 176/352 (50%), Gaps = 50/352 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N++CK   ++ A  F  +M  +G+ P+  TY TLI+ + R+G L EA++++N M+  G
Sbjct: 156 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 215

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+ I+G C   R + A  V+ EM++ GL+PD  +Y+T++   CRK  +  A 
Sbjct: 216 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 275

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  +GV+PD V++S+LI       +L  A    +EM   GL PD   YT +IN Y
Sbjct: 276 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 335

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL------------------------- 215
           C  G + +AL + DEM+ KG + D VTY+ ++NGL                         
Sbjct: 336 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 395

Query: 216 -------------------------CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
                                    C   ++ EAD +F  M+ER   P    +  +IHGH
Sbjct: 396 VTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 455

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           C+ GN+ KA NL+  M      P  VT  TLI    K G  E+ +++  D +
Sbjct: 456 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL 507



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 172/398 (43%), Gaps = 73/398 (18%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++  C   +++ A   + EM +KG+ PD V+Y+T+I+ +CR+G L+ AFQ+   M  KG+
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P   TY+SLI GLC+  R   A ++  EML MGL PD  TY TL+   C + ++++A  
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 346

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA------LMY------------------ 157
           +  EM  +G  PD V++S LI   ++  +   A      L+Y                  
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 406

Query: 158 --------------------------FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
                                     F  M      P   +Y +II+G+CR G + +A  
Sbjct: 407 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  EM+  G V   VT  T++  L +  M  E  ++  + L      +      L+  + 
Sbjct: 467 LYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINH 526

Query: 252 KDGNMNKALN---LFDIMTQK----SIKPDIVTY---------------NTLIDGFCKVG 289
           K+GNM   LN   L++ ++ K    S+ P  +T                 T +DG   VG
Sbjct: 527 KEGNMEAVLNVSRLYNKLSLKCVASSVPPGALTQTSQKIFLSRIIANFDGTAVDGAAHVG 586

Query: 290 EMEKANKLWADMISRKISP-NYISYGILINGYCSMGHV 326
           E  +  K     +    +  N+  +G+   G  +  HV
Sbjct: 587 EGGELFKGLGGFVETAATDGNFDEFGVKFGGEEASDHV 624


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  337 bits (864), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 168/485 (34%), Positives = 279/485 (57%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C++H +  A   L EME++ + P  V+Y  +IN  C    L  A +L+  M+  G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP V  Y++LI G   +GR + A+ +LD M   G++PD   YN ++    +   M EA 
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               E+  RG+ PD V+F   I  +S+ G++  A  YF EM   GL+P+N LYT++ING+
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G ++EAL +   +   G + DV T +  ++GL +   + EA  +F+E+ E+G+ PD 
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 559

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI G CK G + KA  L D M  K I P+I  YN L+DG CK G++++A KL+  
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 619

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+ ++Y  +I+GYC   +V EAF L++EM  KG++P     N ++ G C+ GD
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 679

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA     +M+ +G    ++S+NTLI+G+ +   + +A  L  +M  + ++PD +TY  
Sbjct: 680 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 738

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C+ G+M ++ L+   M E+ L  D  TYT+L+ G+       E F   ++M+ +G
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798

Query: 481 FVPDD 485
             PD+
Sbjct: 799 VKPDE 803



 Score =  317 bits (813), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 167/484 (34%), Positives = 272/484 (56%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K++ A   L  M   G  P++ T+  LI  YCRE  +  A +L++ M  + 
Sbjct: 285 LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 344

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   +Y ++INGLC       A ++L++M   GL P+   Y+TL++    +  + EA 
Sbjct: 345 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEAR 404

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   MS  GVAPDI  ++ +I   S+ G+++ A  Y  E++  GL PD V +   I GY
Sbjct: 405 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 464

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA K  DEML+ G + +   Y  ++NG  +A  L EA  +F  +   GV PD 
Sbjct: 465 SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDV 524

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T +  IHG  K+G + +AL +F  + +K + PD+ TY++LI GFCK GE+EKA +L  +
Sbjct: 525 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 584

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I+PN   Y  L++G C  G +  A +L+  M  KG++P  V+ +T+I GYC+S +
Sbjct: 585 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 644

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A     +M S+GV P S  YN L++G  +E +M+KA  L  +M  +G     +++N 
Sbjct: 645 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNT 703

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G+C+  ++ ++  +   MI K + PD  TYTT+I+ H     ++EA     EM +R 
Sbjct: 704 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 763

Query: 481 FVPD 484
            + D
Sbjct: 764 LIVD 767



 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 163/516 (31%), Positives = 281/516 (54%), Gaps = 36/516 (6%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            LC+  +++ AK+   EM++ G+ PD    + LI+ + REG ++E  ++ + M   G+  
Sbjct: 218 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 277

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + TYN LI+GLCK G+ ++A E+L  M+ +G  P++ T+  L+   CR+ NM  A E+ 
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +R + P  VS+  +I        L  A     +M  +GL P+ V+Y+ +I GY   
Sbjct: 338 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 397

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA-KM---------------------- 220
           G + EA ++ D M   G   D+  YN I++ L +A KM                      
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457

Query: 221 ------------LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
                       +TEA   F+EML+ G+ P+   +T LI+GH K GN+ +AL++F  +  
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 517

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PD+ T +  I G  K G +++A K+++++  + + P+  +Y  LI+G+C  G V +
Sbjct: 518 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 577

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           AF L  EM  KGI P +   N ++ G C+SGD  +A +    M  +G++PDS++Y+T+I+
Sbjct: 578 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 637

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ + EN+ +AF+L  +M ++G+ P    YN ++ G C++G M  +  +   M++KG   
Sbjct: 638 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT 697

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             S + TLI+G+     ++EA +   EM+ +  +PD
Sbjct: 698 TLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732



 Score =  297 bits (761), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 278/484 (57%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  K++ A  +L E++ +G+ PD VT+   I  Y + G + EA +  + M   G
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    Y  LING  K G    A  +   +  +G+ PD  T +  +    +   + EA 
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F E+  +G+ PD+ ++S+LI  F + G++++A     EM   G+ P+  +Y  +++G 
Sbjct: 545 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  A K+ D M EKG   D VTY+T+++G C+++ + EA  LF+EM  +GV P  
Sbjct: 605 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 664

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +  L+HG CK+G+M KA+NLF  M QK     + ++NTLIDG+CK  ++++A++L+ +
Sbjct: 665 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQE 723

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI+++I P++++Y  +I+ +C  G + EA  L+ EM  + +    V+  +++ GY + G 
Sbjct: 724 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 783

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           +S+      KMV++GV PD ++Y  +I    +E+N+ +AF L  ++  +G++     +++
Sbjct: 784 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 843

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++T  C++  + ++  +L  M E GL P  +  +TL+        + EA R  + +   G
Sbjct: 844 LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG 903

Query: 481 FVPD 484
            VPD
Sbjct: 904 LVPD 907



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 236/400 (59%), Gaps = 1/400 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           GV PD  T +  I+   + G ++EA ++ + +  KGL P VFTY+SLI+G CK+G  ++A
Sbjct: 519 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 578

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            E+ DEM   G++P+   YN L+   C+  ++  A ++F  M  +G+ PD V++ST+I  
Sbjct: 579 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 638

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + ++  +  A   F EM S G+ P + +Y  +++G C+ G + +A+ +  EML+KG    
Sbjct: 639 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FAT 697

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            +++NT+++G C++  + EA  LF EM+ + + PD  T+TT+I  HCK G M +A  LF 
Sbjct: 698 TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 757

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M ++++  D VTY +L+ G+ K+G+  +   L+  M+++ + P+ ++YG++I  +C   
Sbjct: 758 EMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKED 817

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           ++ EAF+L  E+VGKG+       + +I   C+  D ++A + L +M   G+ P   + +
Sbjct: 818 NLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACS 877

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           TL+  F     MD+A  +   +++ GLVPD  T   ++ G
Sbjct: 878 TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 148/466 (31%), Positives = 240/466 (51%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           L  M +KG+ P+T TY  +    CR   + EA      M   GLKP     ++LI+G  +
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           +G  D    + D M+  G+  +  TYN L+   C+   M +A EI   M   G  P+  +
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           F  LI  + R   + RAL    EM+   LVP  V Y  +ING C    +  A K+ ++M 
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 376

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G   +VV Y+T++ G      + EA  L + M   GV PD + +  +I    K G M 
Sbjct: 377 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 436

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A      +  + +KPD VT+   I G+ K G+M +A K + +M+   + PN   Y +LI
Sbjct: 437 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 496

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           NG+   G++ EA  ++  +   G+ P + +C+  I G  ++G   +A +  S++  +G+ 
Sbjct: 497 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 556

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD  +Y++LI+GF ++  ++KAF L  +M  +G+ P++  YN ++ G C+ G +  +  +
Sbjct: 557 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 616

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              M EKGL PD  TY+T+I+G+    N+ EAF    EM  +G  P
Sbjct: 617 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP 662



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 207/413 (50%), Gaps = 36/413 (8%)

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           QMG+     +++ L V+ C  E    A  +  +M R    P           +S +  LD
Sbjct: 97  QMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIR---TP-----------YSSSSILD 142

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM-----RDEML---------- 197
             L +FR     G  P  V++ I+I+ Y R G + EA  +      D +L          
Sbjct: 143 SVLFWFRNY--GGSSP--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLR 198

Query: 198 ---EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
              EKG V +  TY  I  GLCRAK + EA   F EM + G+ PD+   + LI G  ++G
Sbjct: 199 SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 258

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
           ++++ L + D+M    I  +++TYN LI G CK G+MEKA ++   MI+    PN  ++ 
Sbjct: 259 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 318

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
           +LI GYC   ++  A  L  EM  + + P+ VS   +I G C   D S A++ L KM   
Sbjct: 319 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 378

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+ P+ + Y+TLI G+  E  +++A  L+  M   G+ PD+  YN I++   + G+M ++
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
              L  +  +GL PD  T+   I G+     + EA ++ DEML  G +P++  
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 491


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  337 bits (864), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 172/487 (35%), Positives = 276/487 (56%), Gaps = 2/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK  ++  AK+ +  + +   YP+  TY +LI  +CR   L+ AF + + M   G
Sbjct: 208 MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG 267

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY++LINGLC +GR + A ++L+EM+Q G+ P   TY   LV  C     SEA 
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M +RG  P+I +F+ LI   SR+G+ + A+  + +M + GLVP  V Y  +IN  
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G    A  +   ML  G +    TYN I+   C    + +A  +F++ML+ G  P+ 
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI+G+CK GN+N A+ L +IM    +KPD  TY  LI GF + G++E A  L+  
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   ISPN+++Y  +I+GY ++  V +A  L+++MV  G  P+  + N +I G+ ++  
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A+ F  KMV +G+ P+ I+Y + I+G  R      AF +  +ME +   P++ TY+ 
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 421 ILTGFCRQGRMHDSEL--ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++ G C++GR  D+E+  +L R+   G  P+  TYTTL+ G   +    EA +    M +
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687

Query: 479 RGFVPDD 485
           +G  P +
Sbjct: 688 KGLQPSE 694



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 251/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTV-TYNTLINAYCREGFLEEAFQLMNSMSGK 59
           M+ +   + ++     FL E+  K  +  T+ ++ TL+    +   ++ A  +   M   
Sbjct: 137 MIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNS 196

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G++P + T+N++IN LCKKGR   AK ++  + +    P+  TY +L++  CR  N+  A
Sbjct: 197 GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLA 256

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F  M + G  P+ V++STLI      G+L+ A+    EM   G+ P    YTI +  
Sbjct: 257 FAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVS 316

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C  G   EA+++  +M ++GCV ++ T+  +++GL R      A  L+++ML  G+ P 
Sbjct: 317 LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  LI+  C +G    A  +F  M      P   TYN +I  FC +G+++KA  ++ 
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+    SPN I+Y  LI GYC  G++  A RL   M G G+KP   +   +I G+ R G
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGG 496

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A      M+  G+ P+ ++Y  +I+G+     +D A AL  KM   G +P   TYN
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V+++GF +   + ++E    +M+++GL P+  TYT+ I+G         AF+   EM +R
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616

Query: 480 GFVPD 484
            + P+
Sbjct: 617 NYFPN 621



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 244/488 (50%), Gaps = 2/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + +++ A   L EM QKG+ P   TY   + + C  G   EA +L+  M  +G
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG 337

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + T+ +LI+GL + G+ + A  +  +ML  GL P T TYN L+ + C +     A 
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  M   G  P   +++ +I  F   G + +A++ F +M  AG  P+ + Y  +I GY
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A+++ + M   G   D  TY  +++G  R   L  A  LF  M+E G+ P+ 
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I G+     ++ AL LF  M +    P   TYN +I GF K   + +A      
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + PN I+Y   I+G C  G    AF++++EM  +   P L + +++I G C+ G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 361 ASKADEF--LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           A  A+ +  L+++   G +P+  +Y TL+ G   E    +A  LV  M+ +GL P    Y
Sbjct: 638 AEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             +L G C+  ++  +  I + M   G     S Y  LI     +N ++EA      ML+
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLE 757

Query: 479 RGFVPDDA 486
           + +  D+ 
Sbjct: 758 KHWNSDEV 765



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 232/458 (50%), Gaps = 2/458 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LC       A   L +M+++G  P+  T+  LI+   R+G  E A  L + M   GL P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
              TYN+LIN LC +GR + A  +   ML  G  P T TYN ++   C   ++ +A  IF
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M + G +P++++++TLI  + + G L+ A+     MK  GL PD   YT +I+G+ R 
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G +  A  +   M+E G   + VTY  I++G      + +A  LF +M+E G  P   T+
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             +I G  K  ++++A N    M ++ + P+++TY + IDG C+ G    A K++ +M  
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 304 RKISPNYISYGILINGYCSMGHVTEA--FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           R   PN  +Y  LI G C  G   +A  + L   +   G +P + +  T++KG C  G  
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +AD+ +  M  +G+ P    Y  L+ G  +   ++ A  +   M+  G    +  Y  +
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKAL 735

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           +   C++  + +++ I   M+EK  N D   +T L++G
Sbjct: 736 ICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDG 773



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 227/458 (49%), Gaps = 2/458 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +D K + A     +M   G+ P TVTYN LIN  C EG  E AF +   M   G
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN +I   C  G   +A  + D+ML+ G SP+  TYNTL+   C++ N++ A 
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+ PD  +++ LI  FSR G+L+ A   F  M   G+ P++V YT II+GY
Sbjct: 468 RLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                V +AL +  +M+E G +    TYN +++G  +   ++EA++   +M+++G+ P+ 
Sbjct: 528 FNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNV 587

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN--KLW 298
            T+T+ I G C++G    A  +F  M +++  P++ TY++LI G C+ G  E A    L 
Sbjct: 588 ITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLL 647

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           A +      PN  +Y  L+ G C  G   EA +L   M  KG++P+      ++ G C++
Sbjct: 648 ARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKN 707

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
                A      M + G       Y  LI    +E  +++A  +   M  +    D + +
Sbjct: 708 LKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAW 767

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            V+L G  ++G       +L  M  +    +  TY  L
Sbjct: 768 TVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 47/104 (45%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK+ K++SA      M+  G       Y  LI A C+E F+EEA  +  +M  K      
Sbjct: 705 CKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDE 764

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVE 109
             +  L++GL K+G  D   ++L  M     + +  TY  L  E
Sbjct: 765 VAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARE 808


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  337 bits (863), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 172/487 (35%), Positives = 276/487 (56%), Gaps = 2/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK  ++  AK+ +  + +   YP+  TY +LI  +CR   L+ AF + + M   G
Sbjct: 208 MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG 267

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY++LINGLC +GR + A ++L+EM+Q G+ P   TY   LV  C     SEA 
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M +RG  P+I +F+ LI   SR+G+ + A+  + +M + GLVP  V Y  +IN  
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G    A  +   ML  G +    TYN I+   C    + +A  +F++ML+ G  P+ 
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI+G+CK GN+N A+ L +IM    +KPD  TY  LI GF + G++E A  L+  
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   ISPN+++Y  +I+GY ++  V +A  L+++MV  G  P+  + N +I G+ ++  
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A+ F  KMV +G+ P+ I+Y + I+G  R      AF +  +ME +   P++ TY+ 
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 421 ILTGFCRQGRMHDSEL--ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++ G C++GR  D+E+  +L R+   G  P+  TYTTL+ G   +    EA +    M +
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687

Query: 479 RGFVPDD 485
           +G  P +
Sbjct: 688 KGLQPSE 694



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 251/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTV-TYNTLINAYCREGFLEEAFQLMNSMSGK 59
           M+ +   + ++     FL E+  K  +  T+ ++ TL+    +   ++ A  +   M   
Sbjct: 137 MIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNS 196

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G++P + T+N++IN LCKKGR   AK ++  + +    P+  TY +L++  CR  N+  A
Sbjct: 197 GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLA 256

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F  M + G  P+ V++STLI      G+L+ A+    EM   G+ P    YTI +  
Sbjct: 257 FAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVS 316

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C  G   EA+++  +M ++GCV ++ T+  +++GL R      A  L+++ML  G+ P 
Sbjct: 317 LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  LI+  C +G    A  +F  M      P   TYN +I  FC +G+++KA  ++ 
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+    SPN I+Y  LI GYC  G++  A RL   M G G+KP   +   +I G+ R G
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGG 496

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A      M+  G+ P+ ++Y  +I+G+     +D A AL  KM   G +P   TYN
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V+++GF +   + ++E    +M+++GL P+  TYT+ I+G         AF+   EM +R
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616

Query: 480 GFVPD 484
            + P+
Sbjct: 617 NYFPN 621



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 244/488 (50%), Gaps = 2/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + +++ A   L EM QKG+ P   TY   + + C  G   EA +L+  M  +G
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG 337

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + T+ +LI+GL + G+ + A  +  +ML  GL P T TYN L+ + C +     A 
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  M   G  P   +++ +I  F   G + +A++ F +M  AG  P+ + Y  +I GY
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A+++ + M   G   D  TY  +++G  R   L  A  LF  M+E G+ P+ 
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I G+     ++ AL LF  M +    P   TYN +I GF K   + +A      
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + PN I+Y   I+G C  G    AF++++EM  +   P L + +++I G C+ G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 361 ASKADEF--LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           A  A+ +  L+++   G +P+  +Y TL+ G   E    +A  LV  M+ +GL P    Y
Sbjct: 638 AEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             +L G C+  ++  +  I + M   G     S Y  LI     +N ++EA      ML+
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLE 757

Query: 479 RGFVPDDA 486
           + +  D+ 
Sbjct: 758 KHWNSDEV 765



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 232/458 (50%), Gaps = 2/458 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LC       A   L +M+++G  P+  T+  LI+   R+G  E A  L + M   GL P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
              TYN+LIN LC +GR + A  +   ML  G  P T TYN ++   C   ++ +A  IF
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M + G +P++++++TLI  + + G L+ A+     MK  GL PD   YT +I+G+ R 
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G +  A  +   M+E G   + VTY  I++G      + +A  LF +M+E G  P   T+
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             +I G  K  ++++A N    M ++ + P+++TY + IDG C+ G    A K++ +M  
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 304 RKISPNYISYGILINGYCSMGHVTEA--FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           R   PN  +Y  LI G C  G   +A  + L   +   G +P + +  T++KG C  G  
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +AD+ +  M  +G+ P    Y  L+ G  +   ++ A  +   M+  G    +  Y  +
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKAL 735

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           +   C++  + +++ I   M+EK  N D   +T L++G
Sbjct: 736 ICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDG 773



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 227/458 (49%), Gaps = 2/458 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +D K + A     +M   G+ P TVTYN LIN  C EG  E AF +   M   G
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN +I   C  G   +A  + D+ML+ G SP+  TYNTL+   C++ N++ A 
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+ PD  +++ LI  FSR G+L+ A   F  M   G+ P++V YT II+GY
Sbjct: 468 RLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                V +AL +  +M+E G +    TYN +++G  +   ++EA++   +M+++G+ P+ 
Sbjct: 528 FNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNV 587

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN--KLW 298
            T+T+ I G C++G    A  +F  M +++  P++ TY++LI G C+ G  E A    L 
Sbjct: 588 ITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLL 647

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           A +      PN  +Y  L+ G C  G   EA +L   M  KG++P+      ++ G C++
Sbjct: 648 ARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKN 707

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
                A      M + G       Y  LI    +E  +++A  +   M  +    D + +
Sbjct: 708 LKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVW 767

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            V+L G  ++G       +L  M  +    +  TY  L
Sbjct: 768 TVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 47/104 (45%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK+ K++SA      M+  G       Y  LI A C+E F+EEA  +  +M  K      
Sbjct: 705 CKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDE 764

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVE 109
             +  L++GL K+G  D   ++L  M     + +  TY  L  E
Sbjct: 765 VVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARE 808


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  335 bits (858), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 169/481 (35%), Positives = 273/481 (56%), Gaps = 4/481 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K D A   L EM  +GV PDTVT+N++++  C+ G  E A  L+  M+ + 
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TYN+LI+GLCK+   DRAK+++DE +  G  PD  TY+ L    C++  + EA 
Sbjct: 327 CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EMS +G  P++V+++TLI    +  + ++A      + S+G VPD V YTII++G 
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +ALKM + ML++GC   V+TY  ++ GLCR   + EA  +F EM+ +    D 
Sbjct: 447 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 506

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + +L++G+CK     +A  + D +      P I  YN L+DG+CK G +++   ++ D
Sbjct: 507 LAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFED 563

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R   PN  +Y I+++G C  G V EAF     M   G  P +VS N II G  ++  
Sbjct: 564 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 623

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + L +M+  G+ PD+++YNTL+  F +EE  D A  ++  M   G+ PD +TYN 
Sbjct: 624 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 683

Query: 421 ILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++G  +  R+ D+  ++  M+  G +    +TY T+I+    +  LK+A    D M   
Sbjct: 684 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 743

Query: 480 G 480
           G
Sbjct: 744 G 744



 Score =  328 bits (841), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 163/514 (31%), Positives = 278/514 (54%), Gaps = 36/514 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +  A CK  ++  A     E+ +    PD + YN +I+ +CR+   + A + +  M+ + 
Sbjct: 201 LTRAFCKTGRLKDA----LEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERK 256

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTYN LI+GLCK  + D+A E+L EM+  G++PDT T+N+++   C+      A 
Sbjct: 257 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 316

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+ R   P   +++TLI    +   +DRA     E  S+G VPD V Y+I+ +G 
Sbjct: 317 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGL 376

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA ++  EM  KGC  ++VTYNT+++GLC+A    +A +L   ++  G  PD 
Sbjct: 377 CKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDV 436

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T ++ G CK+G ++KAL + + M ++   P ++TY  L++G C+ G +++A+ ++ +
Sbjct: 437 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFR----------------------------- 331
           M+S+  + + ++Y  L+NGYC      EA +                             
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDE 556

Query: 332 ---LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
              ++ +M  +G  P + + N ++ G C+ G   +A  FL  M S G  PD +SYN +I+
Sbjct: 557 IPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIID 616

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  +     +A  ++ +M   G+ PD +TYN ++  FC++ R  D+  IL  MI+ G++P
Sbjct: 617 GLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 676

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           D  TY TLI+G    N L +A+    EML+ G V
Sbjct: 677 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 710



 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 146/416 (35%), Positives = 228/416 (54%), Gaps = 4/416 (0%)

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G K   FT N  +  L + G  DR   + + ML  G +PD+ TY+ ++   C+   + +
Sbjct: 119 RGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDK 178

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  +   RG  P++  ++ L   F + G+L  AL  FR + S    PD + Y  II+
Sbjct: 179 AFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIH 234

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+CR      AL+   EM E+    DV TYN +++GLC+A    +A ++ +EM++RGV P
Sbjct: 235 GHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP 294

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  TF +++ G CK G   +A +L  +M +++ +P   TYNTLI G CK   +++A  L 
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            + +S    P+ ++Y IL +G C  G + EAF L  EM GKG  P LV+ NT+I G C++
Sbjct: 355 DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               KA E L  +VS G  PD ++Y  +++G  +E  +DKA  +V  M  +G  P VITY
Sbjct: 415 SKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITY 474

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
             ++ G CR GR+ ++  I   M+ K    D   Y +L+NG+   +  KEA +  D
Sbjct: 475 TALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 169/557 (30%), Positives = 268/557 (48%), Gaps = 78/557 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + + LCK  +ID A   + EM  KG  P+ VTYNTLI+  C+    E+A++L+ S+   G
Sbjct: 372 LADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  +++GLCK+GR D+A ++++ ML+ G +P   TY  L+   CR   + EA 
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-----------------GI---------------FSRN 148
            IF EM  +    D +++ +L+                 GI               + + 
Sbjct: 492 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 551

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+LD     F +M   G VP+   Y I+++G C++G V EA    + M   GCV DVV+Y
Sbjct: 552 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 611

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N I++GL +A    EA  + ++M++ G+ PD  T+ TL+   CK+   + A+ +   M +
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 671

Query: 269 KSIKPDIVTYNTLIDGF------------------------------------CKVGEME 292
             + PD VTYNTLI G                                     CK G ++
Sbjct: 672 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 731

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL---VSCN 349
           +A  L   M    +  N ++Y I I+  C  G + EA  L  EM       TL   VS  
Sbjct: 732 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM------DTLRDEVSYT 785

Query: 350 TIIKGYCRSGDASKADEFLSKMVS-EGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           T+I G C++    +A +   +MV+ +G+   S ++N LI+ F + + +D+A  L+  M  
Sbjct: 786 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQ 845

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G  P VITYN+++T  C+  ++  +  +   M  +G+     +YT LI G   Q   KE
Sbjct: 846 RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKE 905

Query: 469 AFRFHDEMLQRGFVPDD 485
           A +  +EM       DD
Sbjct: 906 ALQVLEEMASSDCEIDD 922



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 244/503 (48%), Gaps = 34/503 (6%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLI 72
           +A +F      +G    T T N  +      G  +    +   M   G  P  +TY+ +I
Sbjct: 108 TAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVI 167

Query: 73  NGLCKKGRCDRAKEVLDEMLQMGL-------------------------------SPDTA 101
             LC+  + D+A  +LD+    G                                SPD  
Sbjct: 168 KSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAI 227

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
            YN ++   CRK +   A E   EM+ R VAPD+ +++ LI    +  + D+A     EM
Sbjct: 228 AYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM 287

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
              G+ PD V +  I++G C+ G    A  +   M E+ C     TYNT+++GLC+ + +
Sbjct: 288 VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNV 347

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
             A DL +E +  G  PD  T++ L  G CK G +++A  L   M+ K   P++VTYNTL
Sbjct: 348 DRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTL 407

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           IDG CK  + EKA +L   ++S    P+ ++Y I+++G C  G + +A ++   M+ +G 
Sbjct: 408 IDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 467

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            P++++   +++G CR+G   +A     +MVS+    D+++Y +L+NG+ +     +A  
Sbjct: 468 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 527

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +V  +      P +  YN ++ G+C++GR+ +   +   M  +G  P+  TY  +++G  
Sbjct: 528 VVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLC 584

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
               + EAF F + M   G VPD
Sbjct: 585 KHGKVDEAFPFLESMHSAGCVPD 607



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 205/385 (53%), Gaps = 5/385 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+ ++D       +M  +G  P+  TYN +++  C+ G ++EAF  + SM   G
Sbjct: 544 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 603

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V +YN +I+GL K  +   A++VLD+M+Q G+ PD  TYNTL+ + C++E   +A 
Sbjct: 604 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 663

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIING 179
            I   M + GV PD V+++TLI   S+  +L  A     EM   G +V     Y  II+ 
Sbjct: 664 GILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDR 723

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G + +AL + D M   G   + VTYN  ++ LC+   L EA  L +EM       D
Sbjct: 724 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRD 780

Query: 240 FYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
             ++TT+I G CK   +++A  L  +++  K +     T+N LID F K   +++A  L 
Sbjct: 781 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+ R  SP+ I+Y ++I   C +  V +A+ L+ EM  +GI  + VS   +I G C  
Sbjct: 841 GLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 900

Query: 359 GDASKADEFLSKMVSEGVDPDSISY 383
           G   +A + L +M S   + D + +
Sbjct: 901 GRGKEALQVLEEMASSDCEIDDLKW 925



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+  +  A + +  M   GV  +TVTYN  I+  C+EG L+EA  L++ M    
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT-- 777

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-GLSPDTATYNTLLVESCRKENMSEA 119
           L+  V +Y ++I GLCK  + DRA ++  EM+ + GL   + T+N L+    + + + EA
Sbjct: 778 LRDEV-SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 836

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +   M +RG +P +++++ +I    +  ++D+A   F EM   G+V  +V YT++I G
Sbjct: 837 LTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 896

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
            C  G   EAL++ +EM    C +D + +  +
Sbjct: 897 LCGQGRGKEALQVLEEMASSDCEIDDLKWEDV 928



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 31/159 (19%)

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           R  D   A  F       G    + + N  +   +   + D+  A+  +M + G  PD  
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL-------------------- 456
           TY++++   C+  ++  +  +L +   +G  P+ S YT L                    
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221

Query: 457 -----------INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                      I+GH  +N+   A  F  EM +R   PD
Sbjct: 222 PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPD 260


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  334 bits (856), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 175/505 (34%), Positives = 288/505 (57%), Gaps = 23/505 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K++ A+  L +M+  G+ P+  T+N L++ YC+ G+L+EA Q+++ M+   
Sbjct: 253 ILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN 312

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TYN LI GLCK G+ D A  + DEM  + L PD  TYNTL+       +  +  
Sbjct: 313 VLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGF 372

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M  +GV P+ V+++ ++  + + G++D A    R+M+ +G  PD V +  +INGY
Sbjct: 373 ELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGY 432

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA +M DEM  KG  M+ VT NTIL+ LC  + L +A  L +   +RG F D 
Sbjct: 433 CKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDE 492

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI G+ KDG   +A+ L+D M +K I P I+TYNT+I G C  G+ +++     +
Sbjct: 493 VSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNE 552

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++   + P+  +Y  +I GYC  G V +AF+   +MV K  KP L +CN +++G C  G 
Sbjct: 553 LLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGM 612

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +  +  +S+G   D+++YNT+I+G  +E+  ++AF L+++ME + L PD  TYN 
Sbjct: 613 LDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNA 672

Query: 421 ILTGFCRQGRMHDSELILWRMIEKG-----------------------LNPDRSTYTTLI 457
           IL+     GRM ++E  + R++E+G                        +P+  T++  I
Sbjct: 673 ILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQI 732

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFV 482
           N   +Q   K+A     E  Q+G  
Sbjct: 733 NELCTQGKYKDAMHMVQESTQKGIT 757



 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 161/487 (33%), Positives = 267/487 (54%), Gaps = 3/487 (0%)

Query: 1   MVNALCKDHKIDS---AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++NAL +     S   +K    ++ + GV  +T T+N LI   C E  L EA  L+  M 
Sbjct: 180 LINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMK 239

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
                P   +YN++++ LCKKG+ + A+++L +M   GL P+  T+N L+   C+   + 
Sbjct: 240 DFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLK 299

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA ++   M++  V PD+ +++ LIG   ++G++D A     EM++  L+PD V Y  +I
Sbjct: 300 EAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLI 359

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG       L+  ++ D+M  KG   + VTYN ++    +   +  A +   +M E G  
Sbjct: 360 NGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS 419

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  TF TLI+G+CK G +++A  + D M++K +K + VT NT++   C   +++ A KL
Sbjct: 420 PDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKL 479

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
            +    R    + +SYG LI GY   G   EA +LW EM  K I P++++ NT+I G C 
Sbjct: 480 LSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCH 539

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           SG   ++ + L++++  G+ PD  +YNT+I G+ RE  ++KAF   +KM  +   PD+ T
Sbjct: 540 SGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFT 599

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            N++L G C +G +  +  +    I KG   D  TY T+I+G   ++  +EAF    EM 
Sbjct: 600 CNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEME 659

Query: 478 QRGFVPD 484
           ++   PD
Sbjct: 660 EKKLGPD 666



 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 158/488 (32%), Positives = 261/488 (53%), Gaps = 2/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C ++K+  A   + +M+    +PD V+YNT+++  C++G L EA  L+  M   G
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   T+N L++G CK G    A +V+D M Q  + PD  TYN L+   C+   + EA 
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  EM    + PD+V+++TLI G F  +  L +      +M+  G+ P+ V Y +++  
Sbjct: 338 RLKDEMENLKLLPDVVTYNTLINGCFDCSSSL-KGFELIDKMEGKGVKPNAVTYNVVVKW 396

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y + G +  A     +M E G   D VT+NT++NG C+A  L+EA  + +EM  +G+  +
Sbjct: 397 YVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMN 456

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T  T++H  C +  ++ A  L    +++    D V+Y TLI G+ K G+  +A KLW 
Sbjct: 457 SVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWD 516

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  ++I P+ I+Y  +I G C  G   ++     E++  G+ P   + NTII GYCR G
Sbjct: 517 EMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREG 576

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              KA +F +KMV +   PD  + N L+ G   E  +DKA  L +   ++G   D +TYN
Sbjct: 577 QVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYN 636

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            I++G C++ R  ++  +L  M EK L PD  TY  +++       +KEA  F   ++++
Sbjct: 637 TIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQ 696

Query: 480 GFVPDDAF 487
           G + D   
Sbjct: 697 GKLQDQTI 704



 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 155/464 (33%), Positives = 254/464 (54%), Gaps = 3/464 (0%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK---KGR 80
           K V    V  +T I AY        A Q+ N M    LKP + T N+LIN L +   K  
Sbjct: 133 KKVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPS 192

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              +K +  +++++G+  +T T+N L+   C +  +SEA  +  +M      PD VS++T
Sbjct: 193 VYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNT 252

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++ +  + G+L+ A     +MK+ GL+P+   + I+++GYC+ G++ EA ++ D M +  
Sbjct: 253 ILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN 312

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            + DV TYN ++ GLC+   + EA  L +EM    + PD  T+ TLI+G     +  K  
Sbjct: 313 VLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGF 372

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L D M  K +KP+ VTYN ++  + K G+M+ A      M     SP+ +++  LINGY
Sbjct: 373 ELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGY 432

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G ++EAFR+  EM  KG+K   V+ NTI+   C       A + LS     G   D 
Sbjct: 433 CKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDE 492

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           +SY TLI G+ ++    +A  L  +M+ + ++P +ITYN ++ G C  G+   S   L  
Sbjct: 493 VSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNE 552

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++E GL PD +TY T+I G+  +  +++AF+FH++M+++ F PD
Sbjct: 553 LLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPD 596


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  333 bits (855), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 182/519 (35%), Positives = 283/519 (54%), Gaps = 35/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNA C   ++D A     +ME+ GV P+ VTYN +I+  C+ G L+EAFQ    M  + 
Sbjct: 203 MVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER 262

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP + TY  LINGL K  R D A  +L EM   G +P+   YNTL+   CR  N+S A 
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTAL 322

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL----------------------------- 151
           +I  +M   G++P+ V+ ++LI  + ++ Q+                             
Sbjct: 323 QIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRL 382

Query: 152 ------DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                 D AL++  EM      P++ L T++++G C+NG   EA+++   +LEKG   + 
Sbjct: 383 CLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANT 442

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT N +++GLC A    EA  L  EMLERG+  D  ++ TLI   CK+G + +   L + 
Sbjct: 443 VTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEE 502

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++ I+PD+ TYN L+ G C +G++E+A  LW +       P+  +YGI+I+GYC    
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANR 562

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V E  +L+ EMV   I+   V   T+I+ YC +G+  +A      M S G+   S +Y++
Sbjct: 563 VEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSS 622

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G      +D A  L+ +M  +GL P+V+ Y  ++ G+C+ G+MH  + IL  M    
Sbjct: 623 LIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINN 682

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++P++ TYT +INGH    N+K A +  +EM Q+G VPD
Sbjct: 683 VHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPD 721



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/495 (30%), Positives = 236/495 (47%), Gaps = 70/495 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  + D A   L EM  +G  P+ V YNTLI+ YCR G +  A Q+ + M   G
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNG 332

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN---------------- 104
           + P   T NSLI G CK  + + A+ +L+EML  G   +  T+                 
Sbjct: 333 ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSAL 392

Query: 105 ------------------TLLVES-CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                             TLLV   C+    SEA E++  +  +G A + V+ + LI   
Sbjct: 393 LFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGL 452

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G  + A    +EM   GLV D++ Y  +I   C+ G V E  K+++EM+ +G   D+
Sbjct: 453 CEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDM 512

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK------------- 252
            TYN +L+GLC    + EA  L++E  + G FPD YT+  +I G+CK             
Sbjct: 513 YTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQE 572

Query: 253 ----------------------DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
                                 +GNM +A  L D M  + I     TY++LI G   +G 
Sbjct: 573 MVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGL 632

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           ++ AN+L  +M    +SPN + Y  LI GYC +G + +   +  EM    + P  ++   
Sbjct: 633 VDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I G+C+ G+   A + L++M  +G+ PD+++YN L NGF +E  M++A  +   M   G
Sbjct: 693 MINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGG 752

Query: 411 LVPDVITYNVILTGF 425
           +  D ITY  ++ G+
Sbjct: 753 ISLDDITYTTLIDGW 767



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 221/428 (51%), Gaps = 37/428 (8%)

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           E+   +   GL P   T N LL    +   +  + ++F  M   GV PD+  FST++  F
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G++D A+  FR+M+  G+ P+ V Y  II+G C+NG + EA + +++M ++     +
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY  ++NGL + +   EA+ +  EM +RG  P+   + TLI G+C+ GN++ AL + D 
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS---------------------- 303
           M    I P+ VT N+LI G+CK  +ME A  L  +M++                      
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387

Query: 304 -------------RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
                        R   PN     +L++G C  G  +EA  LWY ++ KG     V+ N 
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I G C +G   +A + L +M+  G+  DSISYNTLI    +E  +++ F L  +M  +G
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG 507

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN-PDRSTYTTLINGHVSQNNLKEA 469
           + PD+ TYN++L G C  G++ ++   LW   +K  N PD  TY  +I+G+   N ++E 
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAG-GLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566

Query: 470 FRFHDEML 477
            +   EM+
Sbjct: 567 EKLFQEMV 574



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 165/322 (51%), Gaps = 35/322 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+    + A   L EM ++G+  D+++YNTLI A C+EG +EE F+L   M  +G
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG 507

Query: 61  LKPGVFTYNSLINGLCKKGRCDRA-----------------------------------K 85
           ++P ++TYN L++GLC  G+ + A                                   +
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGE 567

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++  EM+ M +  +   Y TL+   C   NM EA  +  +M  RG+     ++S+LI   
Sbjct: 568 KLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGL 627

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S  G +D A     EM+  GL P+ V YT +I GYC+ G + +   +  EM       + 
Sbjct: 628 SNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNK 687

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TY  ++NG C+   +  A  L NEM ++G+ PD  T+  L +G CK+G M +AL + D+
Sbjct: 688 ITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDL 747

Query: 266 MTQKSIKPDIVTYNTLIDGFCK 287
           M+   I  D +TY TLIDG+ K
Sbjct: 748 MSTGGISLDDITYTTLIDGWHK 769



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 141/262 (53%)

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +LF+ +  +G+FP   T   L+    K   +  +  +FDIM    + PD+  ++T+++ F
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  G ++ A +L+  M    ++PN ++Y  +I+G C  G + EAF+   +M  + +KP+L
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+   +I G  +     +A+  L +M   G  P+++ YNTLI+G+ R  N+  A  +   
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M + G+ P+ +T N ++ G+C+  +M  +E +L  M+  G   ++ T+T++I+    +  
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387

Query: 466 LKEAFRFHDEMLQRGFVPDDAF 487
              A  F  EML R F P+D  
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGL 409



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 81/158 (51%)

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
            F L+  +  KG+ P+L +CN ++    ++ +   + +    M   GV PD   ++T++N
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
            F     +D A  L  KME  G+ P+V+TYN I+ G C+ GR+ ++     +M ++ + P
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              TY  LING V      EA     EM  RG+ P++ 
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNV 303


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  333 bits (855), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 172/523 (32%), Positives = 287/523 (54%), Gaps = 39/523 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K+  A   + EM +KGV PD  TY  +++  CR G ++EA +L + M  +G
Sbjct: 16  IISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                  YN+LINGLCK    +RA ++L+EM   G  PD  TYNT+L   CR   +SEA+
Sbjct: 76  CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAK 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG--LVPDNVLYTIIIN 178
           + F  M  RG +PD+V+++ L+    + G++  A   F+ M  A   + PD + Y  +I+
Sbjct: 136 QFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLID 195

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+CR     EA+K+  +++ KG + D VTYN+IL GL R   + EA+++F +M++ G  P
Sbjct: 196 GFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAP 255

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK-------------------------- 272
           +  T++ ++ GHC+ GNM + L L++ MT+K                             
Sbjct: 256 NGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVL 315

Query: 273 ---------PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                    PD+VTYN L+DG CK   ++KA++L++ M+    +P+ +SY +++NG C  
Sbjct: 316 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 375

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             V +A  L+  M+ + + P +V+ N ++ G C++G   +A + L  M    V PD ++ 
Sbjct: 376 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTC 435

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            TL++G  R++  D+A  L   M  +G V DV+ +N++L G CR+G++  + L    M++
Sbjct: 436 TTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVK 495

Query: 444 KG--LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                +PD  TYTTL+N  +    + +A  +  +M   G  PD
Sbjct: 496 SDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPD 538



 Score =  304 bits (778), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 151/431 (35%), Positives = 247/431 (57%), Gaps = 2/431 (0%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M+ KG +P V TY+++I+GLCK G+   A E+++EM + G++PD ATY  ++   CR   
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + EA+E+F +M  RG + + V+++ LI    ++  ++RA     EM S G  PDN+ Y  
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN--EMLE 233
           I++G CR G V EA +  D M  +G   DVV YN +L+ L +   + EA  LF   +M +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           R V PD  T+ TLI G C+    ++A+ LF  +  K   PD VTYN+++ G  +   M++
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A +++  M+    +PN  +Y I+++G+C +G++     L+ EM  K   P ++ CN +I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C++     A + L +M   G  PD ++YN L++G  +   +DKA  L S M + G  P
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D+++Y+V+L G C+  ++HD+ ++  RMIE+ L PD  T+  L++G      L EA    
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 474 DEMLQRGFVPD 484
           D M +   +PD
Sbjct: 421 DVMSEHNVLPD 431



 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 163/488 (33%), Positives = 258/488 (52%), Gaps = 39/488 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCKD  I+ A   L EM  KG  PD +TYNT+++  CR G + EA Q  +SM  +G
Sbjct: 86  LINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRG 145

Query: 61  LKPGV-------------------------------------FTYNSLINGLCKKGRCDR 83
             P V                                      TYN+LI+G C+  + D 
Sbjct: 146 YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDE 205

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A ++  +++  G  PDT TYN++L+   RK NM EAEE+F +M   G AP+  ++S ++ 
Sbjct: 206 AMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLS 265

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
              R G + R L  + EM      PD +L   +I+  C+   V +A K+ +EM + G V 
Sbjct: 266 GHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVP 325

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           DVVTYN +L+GLC+  ++ +A +LF+ M++ G  PD  +++ +++G CK   ++ A  LF
Sbjct: 326 DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLF 385

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D M ++ + PD+VT+N L+DG CK G++++A  L   M    + P+ ++   L++G C  
Sbjct: 386 DRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRD 445

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEG-VDPDSI 381
               EA RL+  MV KG    ++  N ++ G CR G  ++A  F   MV S+G   PD +
Sbjct: 446 KRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVV 505

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y TL+N  +    +D+A     +M   G  PD + YN ++ G  +QGR   ++ +   M
Sbjct: 506 TYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 565

Query: 442 IEKGLNPD 449
            EKG   D
Sbjct: 566 KEKGFLSD 573



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 2/243 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK + +D A      M   G  PD V+Y+ ++N  C+   + +A  L + M  + 
Sbjct: 333 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 392

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V T+N L++GLCK G+ D AK++LD M +  + PD  T  TL+   CR +   EA 
Sbjct: 393 LVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAV 452

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAG-LVPDNVLYTIIIN 178
            +F  M  +G   D++  + ++    R G+L +AL++F+ M KS G   PD V YT ++N
Sbjct: 453 RLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVN 512

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
                G V +A+    +M   GC  D V YNT++NGL +     +AD L   M E+G   
Sbjct: 513 ALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLS 572

Query: 239 DFY 241
           D +
Sbjct: 573 DCF 575


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  333 bits (855), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 178/556 (32%), Positives = 297/556 (53%), Gaps = 69/556 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N +CK  K++ A   + EM +KGV PD+ TY+ LI  +CR   +  AF+L++ M  + 
Sbjct: 352 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 411

Query: 61  LKPGVFTYNSLINGLC-----------------------------------KKGRCDRAK 85
           L P V TY+ +INGLC                                   K+GR + ++
Sbjct: 412 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 471

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L+ M + G+ PD   YN+L++  C+ + M EA     EM  R + P+  ++   I  +
Sbjct: 472 MILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGY 531

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S+ G+++ A  YF EM S G++P+  +YT +I G+C+ G V EA  +   +L +  + DV
Sbjct: 532 SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 591

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TY+ +++GL R   + EA  +F+E+ E+G+ P+ +T+ +LI G CK GN++KA  L + 
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K I PDIVTYN LIDG CK GE+E+A  L+ D+  R ++PN ++Y  +++GYC   +
Sbjct: 652 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 711

Query: 326 VTEAFRLWYEMVGKGIKP----------------------------------TLVSCNTI 351
            T AF+L  EM+ +G+ P                                  + VS NT+
Sbjct: 712 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTL 771

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I+GYC+SG   +A+  L +M+ +   P+ ++Y +LI+   +   M +A  L  +M+ + +
Sbjct: 772 IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNV 831

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           +P   TY  +L G+   G M +   +   M+ KG+ PD+ TY  +I+ +  + N+ EA +
Sbjct: 832 MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACK 891

Query: 472 FHDEMLQRGFVPDDAF 487
             DE+L +G      F
Sbjct: 892 LKDEILVKGMPMKSGF 907



 Score =  330 bits (846), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 296/553 (53%), Gaps = 71/553 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C + +   AK+ L EM   G+ P+ +TYN LI+ + R+G +E+AF++ + M   G
Sbjct: 282 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 341

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  +  +N+L+NG+CK G+ ++A E++ EM++ G+ PD+ TY+ L+   CR +NM+ A 
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 401

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM +R +AP ++++S +I    R G L       REM   GL P+ V+YT ++  +
Sbjct: 402 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 461

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE----------------- 223
            + G V E+  + + M E+G + DV  YN+++ G C+AK + E                 
Sbjct: 462 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521

Query: 224 ------------------ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN---------- 255
                             AD  FNEML  GV P+   +T LI GHCK+GN          
Sbjct: 522 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 581

Query: 256 -------------------------MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
                                    M++A  +F  + +K + P+  TYN+LI G CK G 
Sbjct: 582 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 641

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           ++KA++L  +M  + I+P+ ++Y ILI+G C  G +  A  L+ ++ G+G+ P  V+   
Sbjct: 642 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 701

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++ GYC+S + + A + L +M+  GV PD+  YN ++N   +EE  +KA  L  +M  +G
Sbjct: 702 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
                +++N ++ G+C+ G++ ++  +L  MIEK   P+  TYT+LI+ +     + EA 
Sbjct: 762 FA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 820

Query: 471 RFHDEMLQRGFVP 483
           R   EM +R  +P
Sbjct: 821 RLWLEMQERNVMP 833



 Score =  304 bits (779), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 159/476 (33%), Positives = 268/476 (56%), Gaps = 17/476 (3%)

Query: 26  VYPDTVTYNTLINAYCREG-----------------FLEEAFQLMNSMSGKGLKPGVFTY 68
           V PD  TY  +I+A+C+ G                  L+EA +L  SM  KGL P ++TY
Sbjct: 220 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTY 279

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           + LING C + R   AK +L EM+ +GL P+  TYN L+    R+ ++ +A  I  EM  
Sbjct: 280 DILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVA 339

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G+  +++ ++TL+    + G++++AL   +EM   G+ PD+  Y+++I G+CR   +  
Sbjct: 340 CGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR 399

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A ++ DEM ++     V+TY+ I+NGLCR   L   + +  EM+  G+ P+   +TTL+ 
Sbjct: 400 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 459

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
            H K+G + ++  + + M ++ I PD+  YN+LI GFCK   ME+A     +M+ R++ P
Sbjct: 460 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 519

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N  +YG  I+GY   G +  A R + EM+  G+ P +     +I+G+C+ G+ ++A    
Sbjct: 520 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 579

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             ++S  V  D  +Y+ LI+G  R   M +AF + S+++ +GL+P+  TYN +++G C+Q
Sbjct: 580 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 639

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G +  +  +L  M  KG+NPD  TY  LI+G      ++ A    D++  RG  P+
Sbjct: 640 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN 695



 Score =  298 bits (762), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 167/504 (33%), Positives = 273/504 (54%), Gaps = 18/504 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK-----------------GVYPDTVTYNTLINAYCRE 43
           M++A CK   +  AK  L EM +K                 G+ PD  TY+ LIN +C E
Sbjct: 230 MISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME 289

Query: 44  GFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY 103
               EA  ++  M   GLKP   TYN+LI+G  ++G  ++A  + DEM+  G+  +   +
Sbjct: 290 KRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIW 349

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           NTLL   C+   M +A EI  EM  +GV PD  ++S LI    R   + RA     EMK 
Sbjct: 350 NTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 409

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
             L P  + Y++IING CR G +     +  EM+  G   + V Y T++    +   + E
Sbjct: 410 RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE 469

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           +  +   M E+G+ PD + + +LI G CK   M +A      M ++ ++P+  TY   ID
Sbjct: 470 SRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFID 529

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           G+ K GEME A++ + +M+S  + PN   Y  LI G+C  G+VTEAF ++  ++ + +  
Sbjct: 530 GYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQ 589

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            + + + +I G  R+G   +A    S++  +G+ P++ +YN+LI+G  ++ N+DKA  L+
Sbjct: 590 DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLL 649

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            +M  +G+ PD++TYN+++ G C+ G +  ++ +   +  +GL P+  TY  +++G+   
Sbjct: 650 EEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 709

Query: 464 NNLKEAFRFHDEMLQRGFVPDDAF 487
            N   AF+  +EML RG VP DAF
Sbjct: 710 KNPTAAFQLLEEMLLRG-VPPDAF 732



 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 275/516 (53%), Gaps = 40/516 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K+ +++ ++M L  M ++G+ PD   YN+LI  +C+   +EEA   +  M  + 
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P   TY + I+G  K G  + A    +EML  G+ P+   Y  L+   C++ N++EA 
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 576

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  +  R V  D+ ++S LI   SRNG++  A   F E++  GL+P+   Y  +I+G 
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 636

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A ++ +EM  KG   D+VTYN +++GLC+A  +  A +LF+++  RG+ P+ 
Sbjct: 637 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 696

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD-------------------------- 274
            T+  ++ G+CK  N   A  L + M  + + PD                          
Sbjct: 697 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 756

Query: 275 --------IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
                    V++NTLI+G+CK G++++AN L  +MI ++  PN+++Y  LI+  C  G +
Sbjct: 757 MLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 816

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA RLW EM  + + PT  +  +++ GY   G+ S+      +MV++G++PD ++Y  +
Sbjct: 817 GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVM 876

Query: 387 INGFVREENMDKAFALVSKMENQGLVPD------VITYNVILTGFCRQGRMHDSELILWR 440
           I+ + RE N+ +A  L  ++  +G+         + T +VI  GF   G M ++  +L  
Sbjct: 877 IDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRS 936

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           M++ G   + ++   L++G+ +  N +++     +M
Sbjct: 937 MVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 262/509 (51%), Gaps = 52/509 (10%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P++V ++ L+++Y + GFL EA  +         +P + + NSL+  L K  + +   +V
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR-----------------RG 130
            D M    + PD  TY  ++   C+  N+ +A+ +  EM                   +G
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + PD+ ++  LI  F    +   A +   EM   GL P+ + Y  +I+G+ R G + +A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           +++DEM+  G   +++ +NT+LNG+C+A  + +A ++  EM+E+GV PD  T++ LI GH
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+  NM +A  L D M ++ + P ++TY+ +I+G C+ G ++  N +  +M+   + PN 
Sbjct: 392 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 451

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC-------------- 356
           + Y  L+  +   G V E+  +   M  +GI P +   N++I G+C              
Sbjct: 452 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 511

Query: 357 ---------------------RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
                                ++G+   AD + ++M+S GV P+   Y  LI G  +E N
Sbjct: 512 MLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGN 571

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           + +AF++   + ++ ++ DV TY+V++ G  R G+MH++  I   + EKGL P+  TY +
Sbjct: 572 VTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 631

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           LI+G   Q N+ +A +  +EM  +G  PD
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCIKGINPD 660



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 226/406 (55%), Gaps = 19/406 (4%)

Query: 97  SPDTATYNTLLVESCRKEN-MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           SP++  ++ +L++S RK   + EA  +F         P ++S ++L+G   +  +++   
Sbjct: 151 SPNSVIFD-MLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 209

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVL-----------------EALKMRDEMLE 198
             F  M +  ++PD   YT +I+ +C+ G V                  EA++++  M++
Sbjct: 210 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVD 269

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
           KG V D+ TY+ ++NG C  K   EA  +  EM++ G+ P+  T+  LI G  + G++ +
Sbjct: 270 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 329

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  + D M    I+ +++ +NTL++G CK G+MEKA ++  +M+ + + P+  +Y +LI 
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 389

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G+C   ++  AF L  EM  + + PT+++ + II G CR G+    +  L +MV  G+ P
Sbjct: 390 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 449

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +++ Y TL+    +E  ++++  ++ +M  QG++PDV  YN ++ GFC+  RM ++   L
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 509

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             M+E+ L P+  TY   I+G+     ++ A R+ +EML  G +P+
Sbjct: 510 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 555


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  333 bits (855), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 171/493 (34%), Positives = 277/493 (56%), Gaps = 16/493 (3%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D  + SA+ FL  M + GV P+  TYN L+ A C  G LEEA  ++  M G G  P   T
Sbjct: 130 DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVT 189

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           YN+L+   C+ G  D A+ V+  M + G   P+  T+N+++   C+   M  A ++F EM
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            R G+APD+VS++TL+  + + G L  +L  F EM   GLVPD V +T +I+  C+ G +
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 309

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A+ +  +M E+G  M+ VT+  +++G C+   L +A     EM + G+ P    +  L
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 369

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I+G+CK G M+ A  L   M  K +KPD+VTY+T+I G+CKVG ++ A +L   M+ + +
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I+Y  LI G C    + +A  L+  M+  G++P   +  T+I G+C+ G+  KA  
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN------- 419
              +M+ +GV PD ++Y+ LING  +     +A  L+ K+ ++  VPD I Y+       
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549

Query: 420 --------VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
                    +L GFC +G M +++ +   M+++    D S Y+ LI+GH    N+++A  
Sbjct: 550 KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS 609

Query: 472 FHDEMLQRGFVPD 484
           FH +ML+ GF P+
Sbjct: 610 FHKQMLRSGFSPN 622



 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 157/427 (36%), Positives = 241/427 (56%), Gaps = 2/427 (0%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P V  YN+++  L        A+  L  ML+ G++P+  TYN L+   C +  + EA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIIN 178
             +  +M   G AP+ V+++TL+  F R G+LD A      M+  G   P+ V +  ++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C+ G +  A K+ DEM+ +G   DVV+YNT+L+G C+   L E+  +F+EM +RG+ P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  TFT+LIH  CK GN+ +A+ L   M ++ ++ + VT+  LIDGFCK G ++ A    
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M    I P+ + Y  LINGYC +G +  A  L  EM  K +KP +V+ +TII GYC+ 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+   A +   KM+ +GV PD+I+Y++LI G   E+ ++ A  L   M   G+ PD  TY
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++ G C++G +  +  +   MI KG+ PD  TY+ LING       KEA R   ++  
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531

Query: 479 RGFVPDD 485
              VPD+
Sbjct: 532 EDPVPDN 538



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 170/534 (31%), Positives = 276/534 (51%), Gaps = 51/534 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC   +++ A   + +M   G  P+ VTYNTL+ A+CR G L+ A ++++ M  +G
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217

Query: 61  -LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             KP + T+NS++NGLCK GR + A++V DEM++ GL+PD  +YNTLL   C+   + E+
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGI----------------------------------- 144
             +F EM++RG+ PD+V+F++LI                                     
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G LD AL+   EM+  G+ P  V Y  +INGYC+ G +  A ++  EM  K    D
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VVTY+TI++G C+   L  A  L  +ML++GV PD  T+++LI G C++  +N A  LF+
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M Q  ++PD  TY TLIDG CK G +EKA  L  +MI + + P+ ++Y +LING     
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 325 HVTEAFRLWYEMVGKGIKP-------TLVSCN--------TIIKGYCRSGDASKADEFLS 369
              EA RL +++  +   P        ++ C+         ++KG+C  G   +AD+   
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M+      D   Y+ LI+G  R  N+ KA +   +M   G  P+  +   ++ G   +G
Sbjct: 578 SMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            + +++  +  ++      D      LI+ +  + N+         M + G +P
Sbjct: 638 MVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 17/186 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTL---------------INAYCREGF 45
           ++N L K  +   A   L ++  +   PD + Y+ L               +  +C +G 
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 568

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           ++EA ++  SM  +  K     Y+ LI+G C+ G   +A     +ML+ G SP++ T   
Sbjct: 569 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNS-TSTI 627

Query: 106 LLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            LV    +E M  EA+    ++       D  +   LI +  + G +D  +     M   
Sbjct: 628 SLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARD 687

Query: 165 GLVPDN 170
           GL+P +
Sbjct: 688 GLLPSS 693


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  333 bits (854), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 169/479 (35%), Positives = 274/479 (57%), Gaps = 11/479 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+   +D A   + +M + G+ PD +T+NTLIN  C EG ++EA  L N M   G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V +YN++INGLCK G    A  V  +M Q    P+  TYNT++   C+   ++EA 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   EM  RG+ PD+V+++T++  F   GQL+ A   F+EM    ++PD V + I+++G 
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  + + M EKG   +  TYN +++G C    + EA  +   M+ +G  P+ 
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LI+G+CK   MN+A  L   M++K++ PD VTY+TL+ G C+VG   +A  L+ +
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  + P+ ++Y IL++G+C  GH+ EA +L  EM  + IKP ++    +I+G   +G 
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E  SK+ ++G+ PD  +YN +I G ++E   D+A+    KME+ G +PD  +YNV
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNV 556

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           I+ GF +      +  ++  M+ K  + D ST+  L++              HDE++ R
Sbjct: 557 IIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD-----------LESHDEIISR 604



 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 163/477 (34%), Positives = 265/477 (55%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D  ID A      M +    P  V +   + +  ++     A  L N M   G+   V++
Sbjct: 74  DISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYS 133

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            N LIN LC+    D A  V+ +M ++G+ PD  T+NTL+   C +  + EA  +F EM 
Sbjct: 134 LNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMV 193

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G  P+++S++T+I    +NG    A+  FR+M+     P+ V Y  II+  C++  V 
Sbjct: 194 WSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN 253

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EA++   EM+++G   DVVTYNTIL+G C    L EA  LF EM+ R V PD  TF  L+
Sbjct: 254 EAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILV 313

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G CK+G +++A  + + MT+K  +P+  TYN L+DG+C   +M++A K+   MI +  +
Sbjct: 314 DGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCA 373

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN  SY ILINGYC    + EA RL  EM  K + P  V+ +T+++G C+ G   +A   
Sbjct: 374 PNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNL 433

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M S G+ PD ++Y+ L++GF +  ++D+A  L+ +M  + + P++I Y +++ G   
Sbjct: 434 FKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFI 493

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G++  ++ +  ++   G+ PD  TY  +I G + +    EA+ F  +M   GF+PD
Sbjct: 494 AGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPD 550



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 192/374 (51%), Gaps = 35/374 (9%)

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S +  +D AL  F  M      P  V +   +    +      A+ + ++M   G   +V
Sbjct: 72  SNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNV 131

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            + N ++N LCR   +  A  +  +M + G+ PD  TF TLI+G C +G + +A+ LF+ 
Sbjct: 132 YSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNE 191

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVG----------EMEK---------------------- 293
           M     +P++++YNT+I+G CK G          +ME+                      
Sbjct: 192 MVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRL 251

Query: 294 ---ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
              A +  ++M+ R I P+ ++Y  +++G+CS+G + EA RL+ EMVG+ + P  V+ N 
Sbjct: 252 VNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNI 311

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++ G C+ G  S+A      M  +G +P++ +YN L++G+     MD+A  ++  M  +G
Sbjct: 312 LVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG 371

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
             P++ +YN+++ G+C+  RM++++ +L  M EK L PD  TY+TL+ G       +EA 
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREAL 431

Query: 471 RFHDEMLQRGFVPD 484
               EM   G +PD
Sbjct: 432 NLFKEMCSSGLLPD 445


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 167/486 (34%), Positives = 277/486 (56%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C++H +  A   L EME++ + P  V+Y  +IN  C    L  A +L+  M+  G
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP V  Y+ LI     +GR + A+ +LD M   G++PD   YN ++    +   M EA 
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               E+  RG+ PD V+F   I  +S+ G++  A  YF EM   GL+P+N LYT++ING+
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G ++EAL +   +   G + DV T +  ++GL +   + EA  +F+E+ E+G+ PD 
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI G CK G + KA  L D M  K I P+I  YN L+DG CK G++++A KL+  
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+ ++Y  +I+GYC   +V EAF L++EM  KG++P     N ++ G C+ GD
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA     +M+ +G    ++S+NTLI+G+ +   + +A  L  +M  + ++PD +TY  
Sbjct: 769 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 827

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C+ G+M ++ L+   M E+ L  D  TYT+L+ G+       E F   ++M+ +G
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887

Query: 481 FVPDDA 486
             PD+ 
Sbjct: 888 VKPDEV 893



 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 166/484 (34%), Positives = 271/484 (55%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K++ A   L  M   G  P++ T+  LI  YCRE  +  A +L++ M  + 
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   +Y ++INGLC       A ++L++M   GL P+   Y+ L++    +  + EA 
Sbjct: 434 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEAR 493

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   MS  GVAPDI  ++ +I   S+ G+++ A  Y  E++  GL PD V +   I GY
Sbjct: 494 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 553

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA K  DEML+ G + +   Y  ++NG  +A  L EA  +F  +   GV PD 
Sbjct: 554 SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDV 613

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T +  IHG  K+G + +AL +F  + +K + PD+ TY++LI GFCK GE+EKA +L  +
Sbjct: 614 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 673

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I+PN   Y  L++G C  G +  A +L+  M  KG++P  V+ +T+I GYC+S +
Sbjct: 674 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 733

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A     +M S+GV P S  YN L++G  +E +M+KA  L  +M  +G     +++N 
Sbjct: 734 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNT 792

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G+C+  ++ ++  +   MI K + PD  TYTT+I+ H     ++EA     EM +R 
Sbjct: 793 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 852

Query: 481 FVPD 484
            + D
Sbjct: 853 LIVD 856



 Score =  301 bits (771), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 163/516 (31%), Positives = 281/516 (54%), Gaps = 36/516 (6%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            LC+  +++ AK+   EM++ G+ PD    + LI+ + REG ++E  ++ + M   G+  
Sbjct: 307 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 366

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + TYN LI+GLCK G+ ++A E+L  M+ +G  P++ T+  L+   CR+ NM  A E+ 
Sbjct: 367 NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +R + P  VS+  +I        L  A     +M  +GL P+ V+Y+I+I  Y   
Sbjct: 427 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASE 486

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA-KM---------------------- 220
           G + EA ++ D M   G   D+  YN I++ L +A KM                      
Sbjct: 487 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 546

Query: 221 ------------LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
                       +TEA   F+EML+ G+ P+   +T LI+GH K GN+ +AL++F  +  
Sbjct: 547 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHA 606

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PD+ T +  I G  K G +++A K+++++  + + P+  +Y  LI+G+C  G V +
Sbjct: 607 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 666

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           AF L  EM  KGI P +   N ++ G C+SGD  +A +    M  +G++PDS++Y+T+I+
Sbjct: 667 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 726

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ + EN+ +AF+L  +M ++G+ P    YN ++ G C++G M  +  +   M++KG   
Sbjct: 727 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT 786

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             S + TLI+G+     ++EA +   EM+ +  +PD
Sbjct: 787 TLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 821



 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 163/519 (31%), Positives = 278/519 (53%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A   + +I+ A+  L  M   GV PD   YN +I+   + G +EEA   +  + G+G
Sbjct: 479 LIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 538

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP   T+ + I G  K G+   A +  DEML  GL P+   Y  L+    +  N+ EA 
Sbjct: 539 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 598

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  +   GV PD+ + S  I    +NG++  AL  F E+K  GLVPD   Y+ +I+G+
Sbjct: 599 SIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 658

Query: 181 CRNGFVLEALKMRDEML-----------------------------------EKGCVMDV 205
           C+ G V +A ++ DEM                                    EKG   D 
Sbjct: 659 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDS 718

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY+T+++G C+++ + EA  LF+EM  +GV P  + +  L+HG CK+G+M KA+NLF  
Sbjct: 719 VTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 778

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M QK     + ++NTLIDG+CK  ++++A++L+ +MI+++I P++++Y  +I+ +C  G 
Sbjct: 779 MLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 837

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA  L+ EM  + +    V+  +++ GY + G +S+      KMV++GV PD ++Y  
Sbjct: 838 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGL 897

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I    +E+N+ +AF L  ++  +G++     +++++T  C++  + ++  +L  M E G
Sbjct: 898 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 957

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L P  +   TL+        + EA R  + +   G VPD
Sbjct: 958 LKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 996



 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 156/518 (30%), Positives = 270/518 (52%), Gaps = 35/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALCK   +  AK  L EM++KG+ P+   Y+ +I   C+ G ++EA +L  SM  KG
Sbjct: 234 LVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKG 293

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +TY  +  GLC+  R + AK   +EM + GL PD    + L+    R+ ++ E  
Sbjct: 294 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL 353

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   G+  ++++++ LI    + G++++A    + M + G  P++  + ++I GY
Sbjct: 354 RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGY 413

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   +  AL++ DEM ++  V   V+Y  ++NGLC  K L+ A+ L  +M   G+ P+ 
Sbjct: 414 CREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV 473

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++ LI  +  +G + +A  L D M+   + PDI  YN +I    K G+ME+A+    +
Sbjct: 474 VVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLE 533

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R + P+ +++G  I GY   G +TEA + + EM+  G+ P       +I G+ ++G+
Sbjct: 534 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 593

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     ++ + GV PD  + +  I+G ++   + +A  + S+++ +GLVPDV TY+ 
Sbjct: 594 LMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 653

Query: 421 ILTGFCRQG------RMHD-----------------------------SELILWRMIEKG 445
           +++GFC+QG       +HD                             +  +   M EKG
Sbjct: 654 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 713

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           L PD  TY+T+I+G+    N+ EAF    EM  +G  P
Sbjct: 714 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP 751



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 256/486 (52%), Gaps = 35/486 (7%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N+L+    + G +E  +++ N M    +   V+TY  L+  LCK G    AK VL EM +
Sbjct: 197 NSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDE 256

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            GL+P+   Y+ ++   C+  ++ EA E+   M  +G+ P+  +++ +     R  +++ 
Sbjct: 257 KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNE 316

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A + F EM+  GL PD    + +I+G+ R G + E L+++D M+  G  ++++TYN +++
Sbjct: 317 AKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIH 376

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLC+   + +A ++   M+  G  P+  TF  LI G+C++ NM +AL L D M ++++ P
Sbjct: 377 GLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 436

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
             V+Y  +I+G C   ++  ANKL   M    + PN + Y ILI  Y S G + EA RL 
Sbjct: 437 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLL 496

Query: 334 -----------------------------------YEMVGKGIKPTLVSCNTIIKGYCRS 358
                                               E+ G+G+KP  V+    I GY ++
Sbjct: 497 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 556

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  ++A ++  +M+  G+ P++  Y  LING  +  N+ +A ++  ++   G++PDV T 
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           +  + G  + GR+ ++  +   + EKGL PD  TY++LI+G   Q  +++AF  HDEM  
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676

Query: 479 RGFVPD 484
           +G  P+
Sbjct: 677 KGIAPN 682



 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 133/400 (33%), Positives = 236/400 (59%), Gaps = 1/400 (0%)

Query: 25   GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
            GV PD  T +  I+   + G ++EA ++ + +  KGL P VFTY+SLI+G CK+G  ++A
Sbjct: 608  GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 667

Query: 85   KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             E+ DEM   G++P+   YN L+   C+  ++  A ++F  M  +G+ PD V++ST+I  
Sbjct: 668  FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 727

Query: 145  FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
            + ++  +  A   F EM S G+ P + +Y  +++G C+ G + +A+ +  EML+KG    
Sbjct: 728  YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FAT 786

Query: 205  VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             +++NT+++G C++  + EA  LF EM+ + + PD  T+TT+I  HCK G M +A  LF 
Sbjct: 787  TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 846

Query: 265  IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
             M ++++  D VTY +L+ G+ K+G+  +   L+  M+++ + P+ ++YG++I  +C   
Sbjct: 847  EMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKED 906

Query: 325  HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            ++ EAF+L  E+VGKG+       + +I   C+  D ++A + L +M   G+ P   + N
Sbjct: 907  NLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACN 966

Query: 385  TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            TL+  F     MD+A  +   +++ GLVPD  T   ++ G
Sbjct: 967  TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 225/457 (49%), Gaps = 35/457 (7%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           V ++ LI++Y R G L+EA  +        +   +   NSL+  L K G  +   +V + 
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML   +  D  TY                                   + L+G   + G 
Sbjct: 219 MLDAKMGFDVYTY-----------------------------------TYLVGALCKTGD 243

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           L  A     EM   GL P+  +Y+++I G C+ G + EA++++  M EKG V +  TY  
Sbjct: 244 LRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTI 303

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           I  GLCRAK + EA   F EM + G+ PD+   + LI G  ++G++++ L + D+M    
Sbjct: 304 ITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG 363

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I  +++TYN LI G CK G+MEKA ++   M++    PN  ++ +LI GYC   ++  A 
Sbjct: 364 IPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRAL 423

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L  EM  + + P+ VS   +I G C   D S A++ L KM   G+ P+ + Y+ LI  +
Sbjct: 424 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAY 483

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
             E  +++A  L+  M   G+ PD+  YN I++   + G+M ++   L  +  +GL PD 
Sbjct: 484 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 543

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            T+   I G+     + EA ++ DEML  G +P++  
Sbjct: 544 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 580


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/494 (34%), Positives = 277/494 (56%), Gaps = 16/494 (3%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D  + SA+ FL  M + GV P+  TYN L+ A C  G LEEA  ++  M G G  P   T
Sbjct: 130 DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVT 189

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           YN+L+   C+ G  D A+ V+  M + G   P+  T+N+++   C+   M  A ++F EM
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            R G+APD+VS++TL+  + + G L  +L  F EM   GLVPD V +T +I+  C+ G +
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 309

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A+ +  +M E+G  M+ VT+  +++G C+   L +A     EM + G+ P    +  L
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 369

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I+G+CK G M+ A  L   M  K +KPD+VTY+T+I G+CKVG ++ A +L   M+ + +
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I+Y  LI G C    + +A  L+  M+  G++P   +  T+I G+C+ G+  KA  
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN------- 419
              +M+ +GV PD ++Y+ LING  +     +A  L+ K+ ++  VPD I Y+       
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549

Query: 420 --------VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
                    +L GFC +G M +++ +   M+++    D S Y+ LI+GH    N+++A  
Sbjct: 550 KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS 609

Query: 472 FHDEMLQRGFVPDD 485
           FH +ML+ GF P+ 
Sbjct: 610 FHKQMLRSGFSPNS 623



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/427 (36%), Positives = 241/427 (56%), Gaps = 2/427 (0%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P V  YN+++  L        A+  L  ML+ G++P+  TYN L+   C +  + EA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIIN 178
             +  +M   G AP+ V+++TL+  F R G+LD A      M+  G   P+ V +  ++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C+ G +  A K+ DEM+ +G   DVV+YNT+L+G C+   L E+  +F+EM +RG+ P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  TFT+LIH  CK GN+ +A+ L   M ++ ++ + VT+  LIDGFCK G ++ A    
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M    I P+ + Y  LINGYC +G +  A  L  EM  K +KP +V+ +TII GYC+ 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+   A +   KM+ +GV PD+I+Y++LI G   E+ ++ A  L   M   G+ PD  TY
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++ G C++G +  +  +   MI KG+ PD  TY+ LING       KEA R   ++  
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531

Query: 479 RGFVPDD 485
              VPD+
Sbjct: 532 EDPVPDN 538



 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 163/480 (33%), Positives = 256/480 (53%), Gaps = 51/480 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC   +++ A   + +M   G  P+ VTYNTL+ A+CR G L+ A ++++ M  +G
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217

Query: 61  -LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             KP + T+NS++NGLCK GR + A++V DEM++ GL+PD  +YNTLL   C+   + E+
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGI----------------------------------- 144
             +F EM++RG+ PD+V+F++LI                                     
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G LD AL+   EM+  G+ P  V Y  +INGYC+ G +  A ++  EM  K    D
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VVTY+TI++G C+   L  A  L  +ML++GV PD  T+++LI G C++  +N A  LF+
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M Q  ++PD  TY TLIDG CK G +EKA  L  +MI + + P+ ++Y +LING     
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 325 HVTEAFRLWYEMVGKGIKP-------TLVSCN--------TIIKGYCRSGDASKADEFLS 369
              EA RL +++  +   P        ++ C+         ++KG+C  G   +AD+   
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M+      D   Y+ LI+G  R  N+ KA +   +M   G  P+  +   ++ G   +G
Sbjct: 578 SMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 151/473 (31%), Positives = 251/473 (53%), Gaps = 52/473 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN LCK  +++ A+    EM ++G+ PD V+YNTL++ YC+ G L E+  + + M+ +G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V T+ SLI+  CK G  ++A  ++ +M + GL  +  T+  L+   C+K  + +A 
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM + G+ P +V ++ LI  + + G++D A    REM++  + PD V Y+ II+GY
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++  +ML+KG + D +TY++++ GLC  K L +A +LF  ML+ GV PD 
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG---------------- 284
           +T+TTLI GHCK+GN+ KAL+L D M +K + PD+VTY+ LI+G                
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 285 ----------------------------------FCKVGEMEKANKLWADMISRKISPNY 310
                                             FC  G M++A+K++  M+ R    + 
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
             Y ILI+G+C  G+V +A     +M+  G  P   S  ++++G    G   +AD  +  
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQD 648

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           +++     D+ +   LI+   R+E MD  F    ++      P V  +N ++T
Sbjct: 649 LLTCCPLADAEASKALID-LNRKEGMDY-FQAQGEIWYSESSPSVEYWNYMMT 699


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  332 bits (852), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 165/483 (34%), Positives = 275/483 (56%), Gaps = 20/483 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    ++    F  EME+ G  P+ VTYNT+I+AYC+   + EAF+L+  M+ KG
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + +YN +INGLC++G+     E+L+EM +    PD  T+NTL+   C   N  +A 
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM + G++P++V+++TLI    + G L+RA+ +  +M+  GL P+   YT +I+G+
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF+ +A ++  EM+E G    ++TYN ++NG C    + +A  L  EM+ERG  PD 
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDV 448

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++T+I G C++  + KA  L   M  K I PD+ TY++LI G CK   + +   L+ +
Sbjct: 449 VSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQE 508

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++Y  LIN YC  G + +A RL  EM+ KG  P +V+ N +I G+ +   
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSR 568

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L K++ E   P+ I+YNTLI+      N++   AL                  
Sbjct: 569 TKEAKRLLLKLLYEESVPNEITYNTLIDNC---NNLEFKSAL-----------------A 608

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC +G M++++ +L  M++KG   +   Y  +I+GH    N+++A+  + EML  G
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG 668

Query: 481 FVP 483
           F P
Sbjct: 669 FAP 671



 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/404 (36%), Positives = 237/404 (58%), Gaps = 1/404 (0%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCR-KENMSEAEEIFCEMSRRGVAPDIVSFST 140
           ++A  +++     G  P   +YN +L    R K+++  AE IF EM   GV+P++ +++ 
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI  F   G L+  L +F EM+  G +P+ V Y  II+ YC+   + EA K+   M  KG
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              ++++YN ++NGLCR   + E  ++  EM +R   PD  TF TLI+G+C  GN ++AL
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L   M +  + P++VTY TLI+  CK G + +A +    M  R + PN  +Y  LI+G+
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G + +A+++  EMV  G  PT+++ N +I G+C  G    A   L +M+  G  PD 
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDV 448

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           +SY+T+I+GF R + ++KAF L  +M  +G+ PDV TY+ ++ G C+Q R+ +   +   
Sbjct: 449 VSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQE 508

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M+  GL PD  TYT+LIN +  + +L +A R HDEM+Q+GF PD
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552



 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 151/458 (32%), Positives = 262/458 (57%), Gaps = 1/458 (0%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK-KGRCDRAKEV 87
            +  ++ ++ +  R   + +A  ++N     G  PGV +YN++++ + + K     A+ +
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             EM++ G+SP+  TYN L+   C   N+      F EM R G  P++V+++T+I  + +
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
             ++  A    R M   GL P+ + Y ++ING CR G + E  ++ +EM ++  V D VT
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +NT++NG C      +A  L  EM++ G+ P+  T+TTLI+  CK GN+N+A+   D M 
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            + + P+  TY TLIDGF + G +++A ++  +M+    +P  I+Y  LING+C +G + 
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  EM+ +G  P +VS +TII G+CR+ +  KA +   +MV++G+ PD  +Y++LI
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  ++  + +   L  +M + GL PD +TY  ++  +C +G +  +  +   MI+KG +
Sbjct: 491 QGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           PD  TY  LING   Q+  KEA R   ++L    VP++
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/463 (32%), Positives = 233/463 (50%), Gaps = 50/463 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC++ ++      L EM ++   PD VT+NTLIN YC  G   +A  L   M   G
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY +LIN +CK G  +RA E LD+M   GL P+  TY TL+    ++  + +A 
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  EM   G  P I++++ LI      G+++ A    +EM   G +PD V Y+ II+G+
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRN  + +A +++ EM+ KG   DV TY++++ GLC+ + L E  DLF EML  G+ PD 
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF--------------- 285
            T+T+LI+ +C +G+++KAL L D M QK   PDIVTYN LI+GF               
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578

Query: 286 -----------------------------------CKVGEMEKANKLWADMISRKISPNY 310
                                              C  G M +A+++   M+ +    N 
Sbjct: 579 LLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNE 638

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
             Y ++I+G+  +G++ +A+ L+ EM+  G  P  V+   + K     G   + ++ L  
Sbjct: 639 EVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDY 698

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
            +      ++     LI    +E NMD  F ++  M   GL+P
Sbjct: 699 TLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 202/353 (57%), Gaps = 7/353 (1%)

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD--- 194
           F  ++   +R   +++AL      KS G +P  + Y  I++   R     +++K+ +   
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTK---QSVKIAEGIF 191

Query: 195 -EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
            EM+E G   +V TYN ++ G C A  L      F EM   G  P+  T+ T+I  +CK 
Sbjct: 192 KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKL 251

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
             + +A  L  +M  K + P++++YN +I+G C+ G+M++ +++  +M  R+  P+ +++
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             LINGYC++G+  +A  L  EMV  G+ P +V+  T+I   C++G+ ++A EFL +M  
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+ P+  +Y TLI+GF ++  + +A+ ++ +M   G  P +ITYN ++ G C  GRM D
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +  +L  MIE+G  PD  +Y+T+I+G      L++AF+   EM+ +G  PD A
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVA 484


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  332 bits (852), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 165/483 (34%), Positives = 275/483 (56%), Gaps = 20/483 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    ++    F  EME+ G  P+ VTYNT+I+AYC+   + EAF+L+  M+ KG
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + +YN +INGLC++G+     E+L+EM +    PD  T+NTL+   C   N  +A 
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM + G++P++V+++TLI    + G L+RA+ +  +M+  GL P+   YT +I+G+
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF+ +A ++  EM+E G    ++TYN ++NG C    + +A  L  EM+ERG  PD 
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDV 448

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++T+I G C++  + KA  L   M  K I PD+ TY++LI G CK   + +   L+ +
Sbjct: 449 VSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQE 508

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++Y  LIN YC  G + +A RL  EM+ KG  P +V+ N +I G+ +   
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSR 568

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L K++ E   P+ I+YNTLI+      N++   AL                  
Sbjct: 569 TKEAKRLLLKLLYEESVPNEITYNTLIDNC---NNLEFKSAL-----------------A 608

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC +G M++++ +L  M++KG   +   Y  +I+GH    N+++A+  + EML  G
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG 668

Query: 481 FVP 483
           F P
Sbjct: 669 FAP 671



 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/404 (36%), Positives = 237/404 (58%), Gaps = 1/404 (0%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCR-KENMSEAEEIFCEMSRRGVAPDIVSFST 140
           ++A  +++     G  P   +YN +L    R K+++  AE IF EM   GV+P++ +++ 
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI  F   G L+  L +F EM+  G +P+ V Y  II+ YC+   + EA K+   M  KG
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              ++++YN ++NGLCR   + E  ++  EM +R   PD  TF TLI+G+C  GN ++AL
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L   M +  + P++VTY TLI+  CK G + +A +    M  R + PN  +Y  LI+G+
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G + +A+++  EMV  G  PT+++ N +I G+C  G    A   L +M+  G  PD 
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDV 448

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           +SY+T+I+GF R + ++KAF L  +M  +G+ PDV TY+ ++ G C+Q R+ +   +   
Sbjct: 449 VSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQE 508

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M+  GL PD  TYT+LIN +  + +L +A R HDEM+Q+GF PD
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552



 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 151/458 (32%), Positives = 262/458 (57%), Gaps = 1/458 (0%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK-KGRCDRAKEV 87
            +  ++ ++ +  R   + +A  ++N     G  PGV +YN++++ + + K     A+ +
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             EM++ G+SP+  TYN L+   C   N+      F EM R G  P++V+++T+I  + +
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
             ++  A    R M   GL P+ + Y ++ING CR G + E  ++ +EM ++  V D VT
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +NT++NG C      +A  L  EM++ G+ P+  T+TTLI+  CK GN+N+A+   D M 
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            + + P+  TY TLIDGF + G +++A ++  +M+    +P  I+Y  LING+C +G + 
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  EM+ +G  P +VS +TII G+CR+ +  KA +   +MV++G+ PD  +Y++LI
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  ++  + +   L  +M + GL PD +TY  ++  +C +G +  +  +   MI+KG +
Sbjct: 491 QGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           PD  TY  LING   Q+  KEA R   ++L    VP++
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/463 (32%), Positives = 233/463 (50%), Gaps = 50/463 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC++ ++      L EM ++   PD VT+NTLIN YC  G   +A  L   M   G
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY +LIN +CK G  +RA E LD+M   GL P+  TY TL+    ++  + +A 
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  EM   G  P I++++ LI      G+++ A    +EM   G +PD V Y+ II+G+
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRN  + +A +++ EM+ KG   DV TY++++ GLC+ + L E  DLF EML  G+ PD 
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF--------------- 285
            T+T+LI+ +C +G+++KAL L D M QK   PDIVTYN LI+GF               
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578

Query: 286 -----------------------------------CKVGEMEKANKLWADMISRKISPNY 310
                                              C  G M +A+++   M+ +    N 
Sbjct: 579 LLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNE 638

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
             Y ++I+G+  +G++ +A+ L+ EM+  G  P  V+   + K     G   + ++ L  
Sbjct: 639 EVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDY 698

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
            +      ++     LI    +E NMD  F ++  M   GL+P
Sbjct: 699 TLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 202/353 (57%), Gaps = 7/353 (1%)

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD--- 194
           F  ++   +R   +++AL      KS G +P  + Y  I++   R     +++K+ +   
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTK---QSVKIAEGIF 191

Query: 195 -EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
            EM+E G   +V TYN ++ G C A  L      F EM   G  P+  T+ T+I  +CK 
Sbjct: 192 KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKL 251

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
             + +A  L  +M  K + P++++YN +I+G C+ G+M++ +++  +M  R+  P+ +++
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             LINGYC++G+  +A  L  EMV  G+ P +V+  T+I   C++G+ ++A EFL +M  
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+ P+  +Y TLI+GF ++  + +A+ ++ +M   G  P +ITYN ++ G C  GRM D
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +  +L  MIE+G  PD  +Y+T+I+G      L++AF+   EM+ +G  PD A
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVA 484


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  332 bits (851), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 169/481 (35%), Positives = 271/481 (56%), Gaps = 4/481 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K D A   L EM  +GV PDTVT+N++++  C+ G  E A  L+  M+ + 
Sbjct: 16  LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TYN+LI+GLCK+   DRAK ++DE +  G  PD  TY+ L    C++  + EA 
Sbjct: 76  CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EMS  G  P++V+++TLI    +  + ++A      + S+G VPD V YTII++G 
Sbjct: 136 ELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGL 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +ALKM + ML++GC   V+TY  ++ GLCR   + EA  +F EM+ +    D 
Sbjct: 196 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 255

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + +L++G+CK     +A  + D +      P I  YN L+DG+CK G +++   ++ D
Sbjct: 256 LAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFED 312

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R   PN  +Y I+++G C  G V EAF     M   G  P +VS N II G  ++  
Sbjct: 313 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 372

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + L +M+  G+ PD+++YNTL+  F +EE  D A  ++  M   G+ PD +TYN 
Sbjct: 373 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 432

Query: 421 ILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++G  +  R+ D+  ++  M+  G +    +TY T+I+    +  LK+A    D M   
Sbjct: 433 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 492

Query: 480 G 480
           G
Sbjct: 493 G 493



 Score =  304 bits (778), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 251/459 (54%), Gaps = 32/459 (6%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M+ + + P VFTYN LI+GLCK  + D+A E+L EM+  G++PDT T+N+++   C+   
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
              A  +   M+ R   P   +++TLI    +   +DRA     E  S+G VPD V Y+I
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           + +G C+ G + EA ++  EM   GC  ++VTYNT+++GLC+A    +A +L   ++  G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             PD  T+T ++ G CK+G ++KAL + + M ++   P ++TY  L++G C+ G +++A+
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFR------------------------ 331
            ++ +M+S+  + + ++Y  L+NGYC      EA +                        
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 332 --------LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
                   ++ +M  +G  P + + N ++ G C+ G   +A  FL  M S G  PD +SY
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N +I+G  +     +A  ++ +M   G+ PD +TYN ++  FC++ R  D+  IL  MI+
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G++PD  TY TLI+G    N L +A+    EML+ G V
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 459



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 167/557 (29%), Positives = 267/557 (47%), Gaps = 78/557 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + + LCK  +ID A   + EM   G  P+ VTYNTLI+  C+    E+A++L+ ++   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  +++GLCK+GR D+A ++++ ML+ G +P   TY  L+   CR   + EA 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-----------------GI---------------FSRN 148
            IF EM  +    D +++ +L+                 GI               + + 
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+LD     F +M   G VP+   Y I+++G C++G V EA    + M   GCV DVV+Y
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N I++GL +A    EA  + ++M++ G+ PD  T+ TL+   CK+   + A+ +   M +
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 269 KSIKPDIVTYNTLIDGF------------------------------------CKVGEME 292
             + PD VTYNTLI G                                     CK G ++
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 480

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL---VSCN 349
           +A  L   M    +  N ++Y I I+  C  G + EA  L  EM       TL   VS  
Sbjct: 481 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM------DTLRDEVSYT 534

Query: 350 TIIKGYCRSGDASKADEFLSKMVS-EGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           T+I G C++    +A +   +MV+ +G+   S ++N LI+ F + + +D+A  L+  M  
Sbjct: 535 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQ 594

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G  P VITYN+++T  C+  ++  +  +   M  +G+     +YT LI G   Q   KE
Sbjct: 595 RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKE 654

Query: 469 AFRFHDEMLQRGFVPDD 485
           A +  +EM       DD
Sbjct: 655 ALQVLEEMASSDCEIDD 671



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 214/411 (52%), Gaps = 5/411 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+ ++D       +M  +G  P+  TYN +++  C+ G ++EAF  + SM   G
Sbjct: 293 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 352

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V +YN +I+GL K  +   A++VLD+M+Q G+ PD  TYNTL+ + C++E   +A 
Sbjct: 353 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 412

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIING 179
            I   M + GV PD V+++TLI   S+  +L  A     EM   G +V     Y  II+ 
Sbjct: 413 GILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDR 472

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G + +AL + D M   G   + VTYN  ++ LC+   L EA  L +EM       D
Sbjct: 473 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRD 529

Query: 240 FYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
             ++TT+I G CK   +++A  L  +++  K +     T+N LID F K   +++A  L 
Sbjct: 530 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 589

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+ R  SP+ I+Y ++I   C +  V +A+ L+ EM  +GI  + VS   +I G C  
Sbjct: 590 ELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 649

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           G   +A + L +M S   + D +    L      +   ++A  L+ +M  +
Sbjct: 650 GRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  332 bits (850), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 174/485 (35%), Positives = 284/485 (58%), Gaps = 11/485 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++N LCK  +ID A+  + EM +K   V P+ +TYN+ ++  C++    EA +LM S+  
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351

Query: 59  KGLK--PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
             L+  P   T+++LI+GLCK G+ D A  V D+M+  G  P+  TYN L+   C+ + M
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             A  +   M  +GV PD++++S L+  F +  ++D AL     M S G  P+ V +  I
Sbjct: 412 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 471

Query: 177 INGYCRNGFVLEALKMRDEM-LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           I+G C++    EA +M D+M L+ G V D +TY T+++GL R     +A+ L + M +  
Sbjct: 472 IDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD-- 529

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             PD Y F   I+G  K G++++AL +++ M +  + PD VT+N LI G CK G  E+A+
Sbjct: 530 --PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQAS 587

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSCNTIIKG 354
            L+ +M+++ + P+ +++G LI+G C  G V EA R   +++G  G+ P +V+ N ++ G
Sbjct: 588 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQV-EAARDILDLMGNLGVPPNVVTYNALVHG 646

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+SG   +A +FL +MVS G  PDSI+Y +L+    R    D A  LVS++++ G  PD
Sbjct: 647 LCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 706

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +TYN+++ G  + G+   +  +L  M+ KG +PD  TY TLI+      +L+EA R H 
Sbjct: 707 TVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 766

Query: 475 EMLQR 479
           +M  R
Sbjct: 767 DMSSR 771



 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/492 (34%), Positives = 271/492 (55%), Gaps = 15/492 (3%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ LCK  ++++A+  L  M   GV P+ VTYN L++  C+ G +EEA Q +  M   G
Sbjct: 608  LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P   TY SL+  LC+  R D A +++ E+   G  PDT TYN L+    +     +A 
Sbjct: 668  CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---GLVPDNVLYTIII 177
             +  EM  +G  PD+V+++TLI    + G L+ A     +M S      VP+ V Y+++I
Sbjct: 728  TVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLI 787

Query: 178  NGYCRNGFVLEALKMRDEMLEKGC--VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
            NG C+ G + EA ++  EM+ K C  + +++TYN+ L+GLC+  M+ EA +L   + +  
Sbjct: 788  NGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGS 847

Query: 236  --VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
              V PD  TF+TLI G CK G  ++A N+FD M      P++VTYN L++G CK  +ME+
Sbjct: 848  LRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMER 907

Query: 294  ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
            A+ +   M+ + ++P+ I+Y +L++ +C   HV EA  L + M  +G  P +V+ N+II 
Sbjct: 908  AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967

Query: 354  GYCRSGDASKADEFLSKM-VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G C+S  + +A +    M +  G+ PD I+Y TLI+G  R     +A  L+  M +    
Sbjct: 968  GLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD---- 1023

Query: 413  PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            PD   +N  + G  + G   D    L RM+E  L PD+ T+  LI G     N ++A   
Sbjct: 1024 PDTYAFNCCINGLSKLG---DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASAL 1080

Query: 473  HDEMLQRGFVPD 484
             +EM+ +   PD
Sbjct: 1081 FEEMVAKNLQPD 1092



 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 171/521 (32%), Positives = 282/521 (54%), Gaps = 38/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK +++ +      E+ ++G +PD VTYNTLI++ C+ G LEEA +L   MS + 
Sbjct: 222 IINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRS 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS--PDTATYNTLLVESCRKENMSE 118
             P V TY+ LINGLCK GR D A+E++ EM +      P+  TYN+ L   C++   +E
Sbjct: 282 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 341

Query: 119 AEEIFCEMSRRG---VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           A E+   + R G   V+PD V+FSTLI    + GQ+D A   F +M + G VP+ + Y  
Sbjct: 342 ACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 400

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           ++NG C+   +  A  M + M++KG   DV+TY+ +++  C+A  + EA +L + M  RG
Sbjct: 401 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 460

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK-SIKPDIVTYNTLIDGF--------- 285
             P+  TF ++I G CK     +A  +FD M  K  + PD +TY TLIDG          
Sbjct: 461 CTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQA 520

Query: 286 ----------------------CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                                  K+G++ +A +++  M+  ++ P+ +++ ILI G C  
Sbjct: 521 EALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKA 580

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G+  +A  L+ EMV K ++P +++   +I G C++G    A + L  M + GV P+ ++Y
Sbjct: 581 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 640

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N L++G  +   +++A   + +M + G VPD ITY  ++   CR  R  D+  ++  +  
Sbjct: 641 NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 700

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G +PD  TY  L++G       ++A    +EM+ +G  PD
Sbjct: 701 FGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 243/494 (49%), Gaps = 46/494 (9%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           ++N  +N   + G   +A  L  S      +P  FTY++L+    K G  D  + +    
Sbjct: 113 SFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGG-DVERTLGFFR 171

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIF-CEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
                S   A YN +L   CR    + A EIF  EM+R GVAP IV+++T+I    ++ +
Sbjct: 172 RIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNE 231

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           L   +  F E+   G  PD V Y  +I+  C+ G + EA ++  +M  + CV +VVTY+ 
Sbjct: 232 LGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSV 291

Query: 211 ILNGLCRAKMLTEADDLFNEMLERG----------------------------------- 235
           ++NGLC+   + EA +L  EM  +                                    
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351

Query: 236 ----VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
               V PD  TF+TLI G CK G +++A ++FD M      P+++TYN L++G CK  +M
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           E+A+ +   M+ + ++P+ I+Y +L++ +C    V EA  L + M  +G  P +V+ N+I
Sbjct: 412 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 471

Query: 352 IKGYCRSGDASKADEFLSKM-VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           I G C+S  + +A +    M +  G+ PD I+Y TLI+G  R     +A AL+  M +  
Sbjct: 472 IDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD-- 529

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
             PD   +N  + G  + G +  +  +  RM+E  L PD+ T+  LI G     N ++A 
Sbjct: 530 --PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQAS 587

Query: 471 RFHDEMLQRGFVPD 484
              +EM+ +   PD
Sbjct: 588 ALFEEMVAKNLQPD 601



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/409 (35%), Positives = 227/409 (55%), Gaps = 17/409 (4%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V+ L K  + + A   L EM  KG +PD VTYNTLI++ C+ G LEEA +L   MS + 
Sbjct: 713  LVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRV 772

Query: 61   LK---PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS--PDTATYNTLLVESCRKEN 115
             +   P V TY+ LINGLCK GR D A+E++ EM++      P+  TYN+ L   C++  
Sbjct: 773  SRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSM 832

Query: 116  MSEAEEIFCEMSRRG---VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
            M+EA E+   + R G   V+PD V+FSTLI    + GQ D A   F +M + G VP+ V 
Sbjct: 833  MAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVT 891

Query: 173  YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
            Y +++NG C+   +  A  M + M++KG   DV+TY+ +++  C+A  + EA +L + M 
Sbjct: 892  YNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMA 951

Query: 233  ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK-SIKPDIVTYNTLIDGFCKVGEM 291
             RG  P+  TF ++I G CK     +A  +FD MT K  + PD +TY TLIDG  + G  
Sbjct: 952  SRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWA 1011

Query: 292  EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
             +A  L   M      P+  ++   ING   +G V+ A     E+    + P  V+ N +
Sbjct: 1012 GQAEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRALHRMLEL---ELVPDKVTFNIL 1064

Query: 352  IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
            I G C++G+  +A     +MV++ + PD +++  LI+G  +   ++  +
Sbjct: 1065 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATW 1113



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 193/392 (49%), Gaps = 44/392 (11%)

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING-YCRNGFVLEALKMR 193
           I SF+  + +  ++G   +A+  FR        P++  Y+ ++   Y   G V   L   
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFF 170

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF-NEMLERGVFPDFYTFTTLIHGHCK 252
             +        V  YN +L  LCRA     A ++F  EM   GV P   T+ T+I+G CK
Sbjct: 171 RRIRSS--SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCK 228

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
              +   + LF+ + ++   PD+VTYNTLID  CK G++E+A +L  DM SR   PN ++
Sbjct: 229 SNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVT 288

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKG-------------------------------- 340
           Y +LING C +G + EA  L  EM  K                                 
Sbjct: 289 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 348

Query: 341 -------IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
                  + P  V+ +T+I G C+ G   +A      M++ G  P+ I+YN L+NG  + 
Sbjct: 349 LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 408

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           + M++A A++  M ++G+ PDVITY+V++  FC+  R+ ++  +L  M  +G  P+  T+
Sbjct: 409 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 468

Query: 454 TTLINGHVSQNNLKEAFRFHDEM-LQRGFVPD 484
            ++I+G    +   EAF+  D+M L+ G VPD
Sbjct: 469 NSIIDGLCKSDRSGEAFQMFDDMALKHGLVPD 500



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 131/229 (57%), Gaps = 8/229 (3%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++N LCK  K++ A   +  M  KGV PD +TY+ L++A+C+   ++EA +L++ M+ +G
Sbjct: 895  LMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRG 954

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEM-LQMGLSPDTATYNTLLVESCRKENMSEA 119
              P V T+NS+I+GLCK  +   A ++ D+M L+ GL+PD  TY TL+    R     +A
Sbjct: 955  CTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA 1014

Query: 120  EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E +   M      PD  +F+  I   S+ G + RAL    E++   LVPD V + I+I G
Sbjct: 1015 EVLLDAMPD----PDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILIAG 1067

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
             C+ G   +A  + +EM+ K    DV+T+  +++GLC+A  +    D+ 
Sbjct: 1068 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  332 bits (850), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 171/519 (32%), Positives = 291/519 (56%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N +CK  K++ A   + EM +KGV PD+ TY+ LI  +CR   +  AF+L++ M  + 
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 420

Query: 61  LKPGVFTYNSLINGLC-----------------------------------KKGRCDRAK 85
           L P V TY+ +INGLC                                   K+GR + ++
Sbjct: 421 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 480

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L+ M + G+ PD   YN+L++  C+ + M EA     EM  R + P+  ++   I  +
Sbjct: 481 MILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGY 540

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S+ G+++ A  YF EM S G++P+  +YT +I G+C+ G V EA  +   +L +  + DV
Sbjct: 541 SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 600

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TY+ +++GL R   + EA  +F+E+ E+G+ P+ +T+ +LI G CK GN++KA  L + 
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K I PDIVTYN LIDG CK GE+E+A  L+ D+  R ++PN ++Y  +++GYC   +
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 720

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
            T AF+L  EM+ +G+ P     N I+   C+     KA +   +M+ +G    ++S+NT
Sbjct: 721 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNT 779

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI G+ +   + +A  L+ +M  +  +P+ +TY  ++   C+ G M +++ +   M E+ 
Sbjct: 780 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 839

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + P   TYT+L++G+ +  N+ E     +EM+ +G  PD
Sbjct: 840 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPD 878



 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 166/519 (31%), Positives = 290/519 (55%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C + +   AK+ L EM   G+ P+ +TYN LI+ + R+G +E+AF++ + M   G
Sbjct: 291 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 350

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  +  +N+L+NG+CK G+ ++A E++ EM++ G+ PD+ TY+ L+   CR +NM+ A 
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 410

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM +R +AP ++++S +I    R G L       REM   GL P+ V+YT ++  +
Sbjct: 411 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 470

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE----------------- 223
            + G V E+  + + M E+G + DV  YN+++ G C+AK + E                 
Sbjct: 471 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 530

Query: 224 ------------------ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                             AD  FNEML  GV P+   +T LI GHCK+GN+ +A ++F  
Sbjct: 531 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 590

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +  + +  D+ TY+ LI G  + G+M +A  +++++  + + PN  +Y  LI+G C  G+
Sbjct: 591 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 650

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A +L  EM  KGI P +V+ N +I G C++G+  +A      +   G+ P+ ++Y  
Sbjct: 651 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 710

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +++G+ + +N   AF L+ +M  +G+ PD   YNVIL   C++ +   +  +   M+EKG
Sbjct: 711 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                S + TLI G+     L+EA    +EM+++ F+P+
Sbjct: 771 FASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN 808



 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 169/484 (34%), Positives = 280/484 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++A CK   +  AK  L EM +KG  P+ VTYN +I   CR   L+EA +L  SM  KG
Sbjct: 221 MISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG 280

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P ++TY+ LING C + R   AK +L EM+ +GL P+  TYN L+    R+ ++ +A 
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 340

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM   G+  +++ ++TL+    + G++++AL   +EM   G+ PD+  Y+++I G+
Sbjct: 341 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 400

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   +  A ++ DEM ++     V+TY+ I+NGLCR   L   + +  EM+  G+ P+ 
Sbjct: 401 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 460

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TTL+  H K+G + ++  + + M ++ I PD+  YN+LI GFCK   ME+A     +
Sbjct: 461 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R++ PN  +YG  I+GY   G +  A R + EM+  G+ P +     +I+G+C+ G+
Sbjct: 521 MLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGN 580

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A      ++S  V  D  +Y+ LI+G  R   M +AF + S+++ +GL+P+  TYN 
Sbjct: 581 VTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 640

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G C+QG +  +  +L  M  KG+NPD  TY  LI+G      ++ A    D++  RG
Sbjct: 641 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 700

Query: 481 FVPD 484
             P+
Sbjct: 701 LTPN 704



 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 272/518 (52%), Gaps = 34/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K+ +++ ++M L  M ++G+ PD   YN+LI  +C+   +EEA   +  M  + 
Sbjct: 466 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P   TY + I+G  K G  + A    +EML  G+ P+   Y  L+   C++ N++EA 
Sbjct: 526 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 585

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  +  R V  D+ ++S LI   SRNG++  A   F E++  GL+P+   Y  +I+G 
Sbjct: 586 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A ++ +EM  KG   D+VTYN +++GLC+A  +  A +LF+++  RG+ P+ 
Sbjct: 646 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 705

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD-------------------------- 274
            T+  ++ G+CK  N   A  L + M  + + PD                          
Sbjct: 706 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 765

Query: 275 --------IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
                    V++NTLI+G+CK G++++AN L  +MI ++  PN+++Y  LI+  C  G +
Sbjct: 766 MLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 825

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA RLW EM  + + PT  +  +++ GY   G+ S+      +MV++G++PD ++Y  +
Sbjct: 826 GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVM 885

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+ + RE N+ +A  L  ++  +G+   V  Y+ ++   C++    +   +L  + E G 
Sbjct: 886 IDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGF 945

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                T + +  G     N+ EA      M++ G+V +
Sbjct: 946 RLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 983



 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/475 (31%), Positives = 267/475 (56%), Gaps = 1/475 (0%)

Query: 2    VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
            ++   K  +++ A  +  EM   GV P+   Y  LI  +C+EG + EAF +   +  + +
Sbjct: 537  IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 596

Query: 62   KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
               V TY+ LI+GL + G+   A  +  E+ + GL P+  TYN+L+  SC++ N+ +A +
Sbjct: 597  LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656

Query: 122  IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
            +  EM  +G+ PDIV+++ LI    + G+++RA   F +++  GL P+ V Y  +++GYC
Sbjct: 657  LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716

Query: 182  RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
            ++     A ++ +EML +G   D   YN ILN  C+ +   +A DLF EMLE+G F    
Sbjct: 717  KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTV 775

Query: 242  TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +F TLI G+CK G + +A +L + M +K   P+ VTY +LID  CK G M +A +LW +M
Sbjct: 776  SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835

Query: 302  ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
              R + P   +Y  L++GY ++G+++E   L+ EMV KGI+P  ++   +I  YCR G+ 
Sbjct: 836  QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 895

Query: 362  SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             +A +   +++ +G+     +Y+ LI    ++E   +   L++++   G    + T +VI
Sbjct: 896  MEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVI 955

Query: 422  LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
              GF   G M ++  +L  M++ G   + ++   L++G+ +  N +++     +M
Sbjct: 956  ARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 268/527 (50%), Gaps = 70/527 (13%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P++V ++ L+++Y + GFL EA  +         +P + + NSL+  L K  + +   +V
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            D M    + PD  TY  ++   C+  N+ +A+ +  EM  +G +P++V+++ +IG   R
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC-------------------------- 181
              LD A+   R M   GLVPD   Y I+ING+C                          
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 182 ---------RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
                    R G + +A +++DEM+  G   +++ +NT+LNG+C+A  + +A ++  EM+
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
           E+GV PD  T++ LI GHC+  NM +A  L D M ++ + P ++TY+ +I+G C+ G ++
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
             N +  +M+   + PN + Y  L+  +   G V E+  +   M  +GI P +   N++I
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 502

Query: 353 KGYC-----------------------------------RSGDASKADEFLSKMVSEGVD 377
            G+C                                   ++G+   AD + ++M+S GV 
Sbjct: 503 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 562

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+   Y  LI G  +E N+ +AF++   + ++ ++ DV TY+V++ G  R G+MH++  I
Sbjct: 563 PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGI 622

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              + EKGL P+  TY +LI+G   Q N+ +A +  +EM  +G  PD
Sbjct: 623 FSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 669



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 232/406 (57%), Gaps = 1/406 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ L ++ K+  A     E+++KG+ P+  TYN+LI+  C++G +++A QL+  M  KG
Sbjct: 606  LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            + P + TYN LI+GLCK G  +RAK + D++   GL+P+  TY  ++   C+ +N + A 
Sbjct: 666  INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 725

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++  EM  RGV PD   ++ ++    +  + ++AL  F+EM   G     V +  +I GY
Sbjct: 726  QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGY 784

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C++G + EA  + +EM+EK  + + VTY ++++  C+A M+ EA  L+ EM ER V P  
Sbjct: 785  CKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 844

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T+T+L+HG+   GNM++   LF+ M  K I+PD +TY  +ID +C+ G + +A KL  +
Sbjct: 845  KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE 904

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            ++ + +  +  +Y  LI   C      E  +L  E+   G +  L +C+ I +G+  +G+
Sbjct: 905  ILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGN 964

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
              +A E L  MV  G   ++ S   L++G     N + +  L+ +M
Sbjct: 965  MDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 242/441 (54%), Gaps = 1/441 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++   CK+  +  A      +  + V  D  TY+ LI+   R G + EAF + + +  KG
Sbjct: 571  LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            L P  FTYNSLI+G CK+G  D+A ++L+EM   G++PD  TYN L+   C+   +  A+
Sbjct: 631  LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +F ++  RG+ P+ V+++ ++  + ++     A     EM   G+ PD  +Y +I+N  
Sbjct: 691  NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 750

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+     +AL +  EMLEKG     V++NT++ G C++  L EA+ L  EM+E+   P+ 
Sbjct: 751  CKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH 809

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T+T+LI  +CK G M +A  L+  M ++++ P   TY +L+ G+  +G M + + L+ +
Sbjct: 810  VTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 869

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M+++ I P+ ++Y ++I+ YC  G+V EA +L  E++ KG+  ++ + + +I+  C+  +
Sbjct: 870  MVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEE 929

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              +  + L+++   G      + + +  GF    NMD+A  ++  M   G V +  +   
Sbjct: 930  FFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGD 989

Query: 421  ILTGFCRQGRMHDSELILWRM 441
            ++ G        DS+ +L +M
Sbjct: 990  LVDGNQNGANSEDSDNLLKQM 1010



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 233/424 (54%), Gaps = 37/424 (8%)

Query: 97  SPDTATYNTLLVESCRKEN-MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           SP++  ++ +L++S RK   + EA  +F         P ++S ++L+G   +  +++   
Sbjct: 142 SPNSVIFD-MLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 200

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
             F  M +  ++PD   YT +I+ +C+ G V +A ++  EM EKGC  ++VTYN I+ GL
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC------------------------ 251
           CRA++L EA +L   M+++G+ PD YT+  LI+G C                        
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 320

Query: 252 -----------KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                      + G++ +A  + D M    I+ +++ +NTL++G CK G+MEKA ++  +
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+  +Y +LI G+C   ++  AF L  EM  + + PT+++ + II G CR G+
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
               +  L +MV  G+ P+++ Y TL+    +E  ++++  ++ +M  QG++PDV  YN 
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 500

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+  RM ++   L  M+E+ L P+  TY   I+G+     ++ A R+ +EML  G
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560

Query: 481 FVPD 484
            +P+
Sbjct: 561 VLPN 564



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 60/127 (47%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            M++A C++  +  A     E+  KG+      Y+ LI A C++    E  +L+N +   G
Sbjct: 885  MIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESG 944

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             + G+ T + +  G    G  D A EVL  M++ G   +T +   L+  +    N  +++
Sbjct: 945  FRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSD 1004

Query: 121  EIFCEMS 127
             +  +M+
Sbjct: 1005 NLLKQMA 1011


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  331 bits (849), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 170/486 (34%), Positives = 273/486 (56%), Gaps = 6/486 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+ + +D A+  + +M++ G+ PDTV YN L+N  C++  LEE  +L+  M   G
Sbjct: 168 LIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P  F+YN+++  LC+ G+ + A ++L++M++    PD  TYN+L+   C+   M EAE
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAE 287

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R  AP +++++TLIG FSR  +L  A     +M  AG+ PD V Y  +++G 
Sbjct: 288 RLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA ++ + M+EK C  DVVTY+ ++NGLC+   + +A  L   MLERG  P+ 
Sbjct: 348 CKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNL 407

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF T+I G CK G +++   + ++M + S  PD+VTY+TLIDG+CK   M+ A  +   
Sbjct: 408 VTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG- 466

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
                ISP+  SY  ++ G CS G V EA  +   M  +G  PT      II G C    
Sbjct: 467 -----ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVER 521

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + L  M   G +P+  +Y+ LING  + + ++ A  ++  M  +G VPDV TY  
Sbjct: 522 GDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTS 581

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+  +M  +      M + G  PD+  Y  LI+G     N+++A      ML++G
Sbjct: 582 LIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKG 641

Query: 481 FVPDDA 486
             PD A
Sbjct: 642 CNPDAA 647



 Score =  310 bits (794), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 156/457 (34%), Positives = 253/457 (55%), Gaps = 6/457 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   TY  LI+  C+   ++EA+QL++ M  K   P    YN LI GLCK G+ D A+ V
Sbjct: 90  PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L  ML+    PD  TY +L+V  C+   + EA ++  +M   G+ PD V+++ L+    +
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
             QL+       EM  AG  PD   Y  ++   C +G   EA K+ ++M+EK C  DVVT
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVT 269

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN++++G C+   + EA+ L  +M+ R   P   T+TTLI G  +   +  A  + + M 
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMF 329

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  I PD+VTYN L+DG CK G++E+A++L   M+ +  +P+ ++Y IL+NG C +G V 
Sbjct: 330 KAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVD 389

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L   M+ +G +P LV+ NT+I G+C++G   +  + L  M      PD ++Y+TLI
Sbjct: 390 DARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLI 449

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+ +   M  AFA++      G+ PD  +Y+ +L G C  G++ +++ ++  M ++G  
Sbjct: 450 DGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCP 503

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P  S Y  +I G        EA +    M +RG  P+
Sbjct: 504 PTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPN 540



 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 161/519 (31%), Positives = 274/519 (52%), Gaps = 41/519 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  +ID A   L EM QK  +PD   YN LI   C+ G ++ A  ++  M  + 
Sbjct: 98  LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY SLI G C+    D A++++++M + GL+PDT  YN LL   C++  + E  
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVS 217

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G  PD  S++T++     +G+ + A     +M      PD V Y  +++G+
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGF 277

Query: 181 CR------------------------------NGF-----VLEALKMRDEMLEKGCVMDV 205
           C+                               GF     + +A ++ ++M + G   D+
Sbjct: 278 CKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDL 337

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYN +L+GLC+A  L EA +L   M+E+   PD  T++ L++G CK G ++ A  L ++
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM 397

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++  +P++VT+NT+IDGFCK G++++ +K+   M     +P+ ++Y  LI+GYC    
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR 457

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +AF +       GI P   S +++++G C +G   +A E +  M  +G  P S  Y  
Sbjct: 458 MQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYAL 511

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I G    E  D+A  ++  M  +G  P++ TY++++ G C+  R+ D+  +L  M+EKG
Sbjct: 512 IIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKG 571

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             PD +TYT+LI+G    N +  A++    M   G  PD
Sbjct: 572 CVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPD 610



 Score =  297 bits (761), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 153/459 (33%), Positives = 247/459 (53%), Gaps = 8/459 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   TY  LI  + R G  +   ++ N M  +   P V T+N+++   C+ G  DRA   
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
                +M  SP   TY  L+   C+ + + EA ++  EM ++   PD   ++ LI    +
Sbjct: 82  FRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G++D A    + M     VPD + YT +I G C+   + EA K+ ++M E G   D V 
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN +LNGLC+   L E   L  EM+E G  PD +++ T++   C+ G   +A  + + M 
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +K   PD+VTYN+L+DGFCKV +M++A +L  DM+ R+ +P  I+Y  LI G+     + 
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A+R+  +M   GI P LV+ N ++ G C++G   +A E L  MV +   PD ++Y+ L+
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           NG  +   +D A  L+  M  +G  P+++T+N ++ GFC+ G++ +   +L  M E    
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           PD  TY+TLI+G+   N +++AF         G  PD A
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAI------LGISPDKA 472



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 221/422 (52%), Gaps = 29/422 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC+  K + A   L +M +K   PD VTYN+L++ +C+   ++EA +L+  M G+ 
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY +LI G  +  R   A  V+++M + G+SPD  TYN LL   C+   + EA 
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M  +  APD+V++S L+    + G++D A +    M   G  P+ V +  +I+G+
Sbjct: 358 ELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGF 417

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT------------------ 222
           C+ G V E  K+ + M E  C  DVVTY+T+++G C+A  +                   
Sbjct: 418 CKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSM 477

Query: 223 -----------EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
                      EA ++ + M ++G  P    +  +I G C     ++AL +  +M+++  
Sbjct: 478 LEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGC 537

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           +P++ TY+ LI+G CK   +E A  +   M+ +   P+  +Y  LI+G+C +  +  A++
Sbjct: 538 EPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQ 597

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
            +  M   G +P  ++ N +I G+C+SG+  KA E +  M+ +G +PD+ +Y +L+    
Sbjct: 598 CFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLT 657

Query: 392 RE 393
            E
Sbjct: 658 TE 659



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 184/361 (50%), Gaps = 33/361 (9%)

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL---- 212
           +FRE  S    P N  Y  +I G+ R G     L++ +EML +    DV+T+NTIL    
Sbjct: 11  FFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYC 70

Query: 213 -----------------------------NGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
                                        +GLC+ + + EA  L +EM+++   PD   +
Sbjct: 71  QIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVY 130

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             LI G CK G ++ A N+  +M ++S  PD++TY +LI G C+   +++A KL   M  
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKE 190

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             ++P+ ++Y  L+NG C    + E  +L  EMV  G +P   S NT++   C SG   +
Sbjct: 191 SGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEE 250

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A + L KM+ +   PD ++YN+L++GF +   MD+A  L+  M  +   P VITY  ++ 
Sbjct: 251 AGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIG 310

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GF R  R+ D+  ++  M + G++PD  TY  L++G      L+EA    + M+++   P
Sbjct: 311 GFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP 370

Query: 484 D 484
           D
Sbjct: 371 D 371



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 132/267 (49%), Gaps = 12/267 (4%)

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           E    F E       P   T+  LI G  + GN    L + + M  +   PD++T+NT++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 283 DGFCKVGEMEKA-----NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
             +C++G++++A      K+W        SP   +Y ILI+G C    + EA++L  EM+
Sbjct: 67  KAYCQIGDLDRALSHFRGKMWC-------SPTAFTYCILIHGLCQCQRIDEAYQLLDEMI 119

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            K   P     N +I G C+ G    A   L  M+     PD I+Y +LI G  +   +D
Sbjct: 120 QKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALD 179

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           +A  L+ KM+  GL PD + YN +L G C+Q ++ +   +L  M+E G  PD  +Y T++
Sbjct: 180 EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVV 239

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                    +EA +  ++M+++   PD
Sbjct: 240 ACLCESGKYEEAGKILEKMIEKKCGPD 266



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
           F  +  S+   P + +Y  LI GF R  N      + ++M  +   PDVIT+N IL  +C
Sbjct: 11  FFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYC 70

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + G + D  L  +R  +   +P   TY  LI+G      + EA++  DEM+Q+   PD A
Sbjct: 71  QIGDL-DRALSHFRG-KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAA 128


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  331 bits (848), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 166/485 (34%), Positives = 279/485 (57%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +  ++    ++ ++GV P+  T+N  I   C+EG L+ A +L+  +S +G
Sbjct: 301 LVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREG 360

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V TYN++I GLC+K R   A+E L +M+  G  P+  TYN+++   C+K  + +A 
Sbjct: 361 LRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDAN 420

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +   +G  PD  ++ +L+  F ++G  D+A+  F++    GL P  ++Y  +I G 
Sbjct: 421 RILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGL 480

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +L AL++ +EM EKGC  D+ TYN I+NGLC+   L++A+ L  + + +G  PD 
Sbjct: 481 CQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDI 540

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ TL+ G+C+   ++ A+ L + M  + + PD++TYNTL++G CK  + E+  +++  
Sbjct: 541 FTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKA 600

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +  +PN I+Y  +I   C+   V EA  L  EM  KG+ P +VS  T+I G+C+ GD
Sbjct: 601 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGD 660

Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A      M  +  V   + +YN +I+ F  + NM  A  L S+M+  G  PD  TY 
Sbjct: 661 LDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 720

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++ GFC+ G ++     L   IEKG  P  +T+  ++N    ++ ++EA      M+Q+
Sbjct: 721 VLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQK 780

Query: 480 GFVPD 484
             VPD
Sbjct: 781 DIVPD 785



 Score =  311 bits (797), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 162/473 (34%), Positives = 269/473 (56%), Gaps = 1/473 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D A+    EM +  + PD  T+N L++A C++GF+ E+ +L + +  +G+ P +FT+N  
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I GLCK+G  DRA  +L  + + GL PD  TYNT++   CRK  + EAEE   +M   G 
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 396

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P+  +++++I  + + G +  A    ++    G  PD   Y  ++NG+C++G   +A+ 
Sbjct: 397 EPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMA 456

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  + L KG    ++ YNT++ GLC+  ++  A  L NEM E+G  PD +T+  +I+G C
Sbjct: 457 VFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLC 516

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K G ++ A +L      K   PDI TYNTL+DG+C+  +++ A +L   M S+ ++P+ I
Sbjct: 517 KMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVI 576

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  L+NG C      E   ++  M  KG  P +++ NTII+  C S   ++A + L +M
Sbjct: 577 TYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEM 636

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI-TYNVILTGFCRQGR 430
            S+G+ PD +S+ TLI GF +  ++D A+ L   ME Q  V     TYN+I++ F  Q  
Sbjct: 637 KSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLN 696

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           M  +  +   M + G +PD  TY  LI+G     N+ + ++F  E +++GF+P
Sbjct: 697 MKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749



 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 153/470 (32%), Positives = 260/470 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +    + A      M+ K V  D  TY   I ++CR G    A +L+ +M   G
Sbjct: 196 IMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLG 255

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                  Y +++ G  + G  DRA+E+ DEML+  L PD  T+N L+   C+K  + E+E
Sbjct: 256 CFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESE 315

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F ++ +RGV P++ +F+  I    + G LDRA+     +   GL PD V Y  +I G 
Sbjct: 316 RLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGL 375

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   V+EA +   +M+  G   +  TYN+I++G C+  M+ +A+ +  + + +G  PD 
Sbjct: 376 CRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDE 435

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +L++G C+DG+ ++A+ +F     K ++P I+ YNTLI G C+ G +  A +L  +
Sbjct: 436 FTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNE 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +   P+  +Y ++ING C MG +++A  L  + + KG  P + + NT++ GYCR   
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLK 555

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E +++M S+G+ PD I+YNTL+NG  +    ++   +   M  +G  P++ITYN 
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNT 615

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           I+   C   +++++  +L  M  KGL PD  ++ TLI G     +L  A+
Sbjct: 616 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAY 665



 Score =  280 bits (717), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 255/464 (54%), Gaps = 3/464 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  LCK+  +D A   L  + ++G+ PD VTYNT+I   CR+  + EA + ++ M   G 
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 396

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P  FTYNS+I+G CKKG    A  +L + +  G  PD  TY +L+   C+  +  +A  
Sbjct: 397 EPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMA 456

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F +   +G+ P I+ ++TLI    + G +  AL    EM   G  PD   Y +IING C
Sbjct: 457 VFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLC 516

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G + +A  +  + + KGC+ D+ TYNT+++G CR   L  A +L N M  +G+ PD  
Sbjct: 517 KMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVI 576

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+ TL++G CK     + + +F  MT+K   P+I+TYNT+I+  C   ++ +A  L  +M
Sbjct: 577 TYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEM 636

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSCNTIIKGYCRSGD 360
            S+ ++P+ +S+G LI G+C +G +  A+ L+  M  +  +  T  + N II  +    +
Sbjct: 637 KSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLN 696

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A    S+M   G DPD+ +Y  LI+GF +  N+++ +  + +   +G +P + T+  
Sbjct: 697 MKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGR 756

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPD--RSTYTTLINGHVS 462
           +L   C + ++ ++  I+  M++K + PD   + +     GH++
Sbjct: 757 VLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNTIFEADKKGHIT 800



 Score =  270 bits (691), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 240/457 (52%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   +YN ++N     G+  +A ++   M  K ++  V+TY   I   C+ GR   A  +
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L  M  +G   +   Y T++       +   A E+F EM    + PD+ +F+ L+    +
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 307

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +  +   F ++   G+ P+   + I I G C+ G +  A+++   +  +G   DVVT
Sbjct: 308 KGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVT 367

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++ GLCR   + EA++  ++M+  G  P+ +T+ ++I G+CK G +  A  +     
Sbjct: 368 YNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAV 427

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K  KPD  TY +L++GFC+ G+ ++A  ++ D + + + P+ I Y  LI G C  G + 
Sbjct: 428 FKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLIL 487

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A +L  EM  KG KP + + N II G C+ G  S A+  +   +++G  PD  +YNTL+
Sbjct: 488 PALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLV 547

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+ R+  +D A  LV++M +QG+ PDVITYN +L G C+  +  +   I   M EKG  
Sbjct: 548 DGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCA 607

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TY T+I    +   + EA     EM  +G  PD
Sbjct: 608 PNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 238/461 (51%), Gaps = 6/461 (1%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           +GVY + + +      Y R+G ++EA      M      P V++YN+++N L + G  ++
Sbjct: 155 EGVYVEAMRF------YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQ 208

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A +V   M    +  D  TY   +   CR      A  +   M   G   + V++ T++ 
Sbjct: 209 AHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVT 268

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            F   G  DRA   F EM    L PD   +  +++  C+ GFVLE+ ++ D++L++G   
Sbjct: 269 GFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCP 328

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           ++ T+N  + GLC+   L  A  L   +   G+ PD  T+ T+I G C+   + +A    
Sbjct: 329 NLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECL 388

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M     +P+  TYN++IDG+CK G +  AN++  D + +   P+  +Y  L+NG+C  
Sbjct: 389 HKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQD 448

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G   +A  ++ + +GKG++P+++  NT+IKG C+ G    A + +++M  +G  PD  +Y
Sbjct: 449 GDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTY 508

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N +ING  +   +  A  L+     +G +PD+ TYN ++ G+CRQ ++  +  ++ RM  
Sbjct: 509 NLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWS 568

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +G+ PD  TY TL+NG       +E       M ++G  P+
Sbjct: 569 QGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 229/417 (54%), Gaps = 1/417 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  ++  A+  L +M   G  P+  TYN++I+ YC++G + +A +++     KG
Sbjct: 371 VICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKG 430

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP  FTY SL+NG C+ G  D+A  V  + L  GL P    YNTL+   C++  +  A 
Sbjct: 431 FKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPAL 490

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM+ +G  PDI +++ +I    + G L  A     +  + G +PD   Y  +++GY
Sbjct: 491 QLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGY 550

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   +  A+++ + M  +G   DV+TYNT+LNGLC+     E  ++F  M E+G  P+ 
Sbjct: 551 CRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNI 610

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I   C    +N+A++L   M  K + PD+V++ TLI GFCKVG+++ A  L+  
Sbjct: 611 ITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRG 670

Query: 301 MISR-KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           M  +  +S    +Y I+I+ +    ++  A RL+ EM   G  P   +   +I G+C++G
Sbjct: 671 MEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTG 730

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + ++  +FL + + +G  P   ++  ++N    E  + +A  ++  M  + +VPD +
Sbjct: 731 NVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV 787



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 241/487 (49%), Gaps = 39/487 (8%)

Query: 36  LINAYCR--EGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL------------------ 75
           L++ +C   E       QL+   + +G K  +FTY S++  L                  
Sbjct: 89  LVDVFCMKYEDVCIRNLQLIKK-TKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRS 147

Query: 76  ------------------CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
                              +KG+   A +  + M      P   +YN ++         +
Sbjct: 148 NLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFN 207

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A +++  M  + V  D+ +++  I  F R G+   AL   R M   G   + V Y  ++
Sbjct: 208 QAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVV 267

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G+   G    A ++ DEMLE     DV T+N +++ LC+   + E++ LF+++L+RGV 
Sbjct: 268 TGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVC 327

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+ +TF   I G CK+G++++A+ L   ++++ ++PD+VTYNT+I G C+   + +A + 
Sbjct: 328 PNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEEC 387

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M++    PN  +Y  +I+GYC  G V +A R+  + V KG KP   +  +++ G+C+
Sbjct: 388 LHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQ 447

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            GD  +A       + +G+ P  I YNTLI G  ++  +  A  L+++M  +G  PD+ T
Sbjct: 448 DGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWT 507

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN+I+ G C+ G + D+  ++   I KG  PD  TY TL++G+  Q  L  A    + M 
Sbjct: 508 YNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMW 567

Query: 478 QRGFVPD 484
            +G  PD
Sbjct: 568 SQGMTPD 574



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 144/285 (50%), Gaps = 8/285 (2%)

Query: 209 NTILNGLC--------RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           NT+L G+         R   + EA D F  M      P  Y++  +++   + G  N+A 
Sbjct: 151 NTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAH 210

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            ++  M  K ++ D+ TY   I  FC+ G    A +L  +M       N ++Y  ++ G+
Sbjct: 211 KVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGF 270

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G    A  L+ EM+   + P + + N ++   C+ G   +++    K++  GV P+ 
Sbjct: 271 YEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNL 330

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            ++N  I G  +E ++D+A  L+  +  +GL PDV+TYN ++ G CR+ R+ ++E  L +
Sbjct: 331 FTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHK 390

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           M+  G  P+  TY ++I+G+  +  + +A R   + + +GF PD+
Sbjct: 391 MVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDE 435


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  330 bits (846), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 171/485 (35%), Positives = 285/485 (58%), Gaps = 21/485 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC   +++ A   + +M   G  P+ VTYNTL+ A+CR G L+ A ++++ M  +G
Sbjct: 16  LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 75

Query: 61  -LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             KP + T+NS++NGLCK GR + A++V DEM++ GL+PD  +YNTLL   C+   + E+
Sbjct: 76  NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 135

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM++RG+ PD+V+F++LI    + G L++A+    +M+  GL  + V +T +I+G
Sbjct: 136 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 195

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ GF+ +AL   +EM + G    VV YN ++NG C+   +  A +L  EM  + V PD
Sbjct: 196 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 255

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++T+I G+CK GN++ A  L   M +K + PD +TY++LI G C+   +  A +L+ 
Sbjct: 256 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 315

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+   + P+  +Y  LI+G+C  G+V +A  L  EM+ KG+ P +V+ + +I G  +S 
Sbjct: 316 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 375

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   L K+  E   PD+I Y+ L+                SK E + +V       
Sbjct: 376 RTKEAHRLLFKLYHEDPVPDNIKYDALM-------------LCCSKAEFKSVV------- 415

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L GFC +G M +++ +   M+++    D S Y+ LI+GH    N+++A  FH +ML+ 
Sbjct: 416 ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 475

Query: 480 GFVPD 484
           GF P+
Sbjct: 476 GFSPN 480



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 148/396 (37%), Positives = 229/396 (57%), Gaps = 1/396 (0%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M++ G++P+  TYN L+   C +  + EA  +  +M   G AP+ V+++TL+  F R G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 151 LDRALMYFREMKSAG-LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           LD A      M+  G   P+ V +  ++NG C+ G +  A K+ DEM+ +G   DVV+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T+L+G C+   L E+  +F+EM +RG+ PD  TFT+LIH  CK GN+ +A+ L   M ++
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            ++ + VT+  LIDGFCK G ++ A     +M    I P+ + Y  LINGYC +G +  A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  EM  K +KP +V+ +TII GYC+ G+   A +   KM+ +GV PD+I+Y++LI G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
              E+ ++ A  L   M   G+ PD  TY  ++ G C++G +  +  +   MI KG+ PD
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             TY+ LING       KEA R   ++     VPD+
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 396



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/463 (32%), Positives = 248/463 (53%), Gaps = 50/463 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN LCK  +++ A+    EM ++G+ PD V+YNTL++ YC+ G L E+  + + M+ +G
Sbjct: 87  MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V T+ SLI+  CK G  ++A  ++ +M + GL  +  T+  L+   C+K  + +A 
Sbjct: 147 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 206

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM + G+ P +V ++ LI  + + G++D A    REM++  + PD V Y+ II+GY
Sbjct: 207 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++  +ML+KG + D +TY++++ GLC  K L +A +LF  ML+ GV PD 
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG---------------- 284
           +T+TTLI GHCK+GN+ KAL+L D M +K + PD+VTY+ LI+G                
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 386

Query: 285 ----------------------------------FCKVGEMEKANKLWADMISRKISPNY 310
                                             FC  G M++A+K++  M+ R    + 
Sbjct: 387 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 446

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
             Y ILI+G+C  G+V +A     +M+  G  P   S  ++++G    G   +AD  +  
Sbjct: 447 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQD 506

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           +++     D+ +   LI+   +E N+D    ++  M   GL+P
Sbjct: 507 LLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 17/186 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTL---------------INAYCREGF 45
           ++N L K  +   A   L ++  +   PD + Y+ L               +  +C +G 
Sbjct: 367 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 426

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           ++EA ++  SM  +  K     Y+ LI+G C+ G   +A     +ML+ G SP++ T   
Sbjct: 427 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNS-TSTI 485

Query: 106 LLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            LV    +E M  EA+    ++       D  +   LI +  + G +D  +     M   
Sbjct: 486 SLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARD 545

Query: 165 GLVPDN 170
           GL+P +
Sbjct: 546 GLLPSS 551


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  330 bits (846), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 165/486 (33%), Positives = 278/486 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K+  A   L    + G  PDT+T++TL+N +C EG + EA  L++ M    
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T ++LINGLC KGR   A  ++D M++ G  PD  TY  +L   C+  N + A 
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M  R +   +V +S +I    ++G  D AL  F EM+  G+  D V Y+ +I G 
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G   +  KM  EM+ +  + DVVT++ +++   +   L EA +L+NEM+ RG+ PD 
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G CK+  +++A  +FD+M  K  +PDIVTY+ LI+ +CK   ++   +L+ +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+ + PN I+Y  L+ G+C  G +  A  L+ EMV +G+ P++V+   ++ G C +G+
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA E   KM    +      YN +I+G      +D A++L   + ++G+ PDV+TYNV
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G + +++++  +M E G  PD  TY  LI  H+  + L  +    +EM   G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590

Query: 481 FVPDDA 486
           F  D +
Sbjct: 591 FSADSS 596



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/422 (32%), Positives = 229/422 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC   ++  A + +  M + G  PD VTY  ++N  C+ G    A  L   M  + 
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V  Y+ +I+ LCK G  D A  + +EM   G+  D  TY++L+   C      +  
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  R + PD+V+FS LI +F + G+L  A   + EM + G+ PD + Y  +I+G+
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA +M D M+ KGC  D+VTY+ ++N  C+AK + +   LF E+  +G+ P+ 
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TL+ G C+ G +N A  LF  M  + + P +VTY  L+DG C  GE+ KA +++  
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   +++     Y I+I+G C+   V +A+ L+  +  KG+KP +V+ N +I G C+ G 
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+AD    KM  +G  PD  +YN LI   +    +  +  L+ +M+  G   D  T  +
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600

Query: 421 IL 422
           ++
Sbjct: 601 VI 602



 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 229/431 (53%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           + +A  L  SM      P    +N L + + +  + D        M   G+  D  T   
Sbjct: 51  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   CRK+ +  A  +     + G  PD ++FSTL+  F   G++  A+     M    
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             PD V  + +ING C  G V EAL + D M+E G   D VTY  +LN LC++     A 
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           DLF +M ER +      ++ +I   CKDG+ + AL+LF+ M  K IK D+VTY++LI G 
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  G+ +   K+  +MI R I P+ +++  LI+ +   G + EA  L+ EM+ +GI P  
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++ N++I G+C+     +A++    MVS+G +PD ++Y+ LIN + + + +D    L  +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           + ++GL+P+ ITYN ++ GFC+ G+++ ++ +   M+ +G+ P   TY  L++G      
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470

Query: 466 LKEAFRFHDEM 476
           L +A    ++M
Sbjct: 471 LNKALEIFEKM 481



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 220/400 (55%), Gaps = 1/400 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK      A     +ME++ +    V Y+ +I++ C++G  ++A  L N M  KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V TY+SLI GLC  G+ D   ++L EM+   + PD  T++ L+    ++  + EA+
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++ EM  RG+APD +++++LI  F +   L  A   F  M S G  PD V Y+I+IN Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V + +++  E+  KG + + +TYNT++ G C++  L  A +LF EM+ RGV P  
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L+ G C +G +NKAL +F+ M +  +   I  YN +I G C   +++ A  L+  
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + P+ ++Y ++I G C  G ++EA  L+ +M   G  P   + N +I+ +     
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
              + E + +M   G   DS +   +I+  + +  +DK+F
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVID-MLSDRRLDKSF 614



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 81/162 (50%)

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A  L+  M+     PT +  N +     R+        F   M   G++ D  +  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            +IN + R++ +  AF+++ +    G  PD IT++ ++ GFC +GR+ ++  ++ RM+E 
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              PD  T +TLING   +  + EA    D M++ GF PD+ 
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  330 bits (845), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 165/486 (33%), Positives = 278/486 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K+  A   L    + G  PDT+T++TL+N +C EG + EA  L++ M    
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T ++LINGLC KGR   A  ++D M++ G  PD  TY  +L   C+  N + A 
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M  R +   +V +S +I    ++G  D AL  F EM+  G+  D V Y+ +I G 
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G   +  KM  EM+ +  + DVVT++ +++   +   L EA +L+NEM+ RG+ PD 
Sbjct: 320 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 379

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G CK+  +++A  +FD+M  K  +PDIVTY+ LI+ +CK   ++   +L+ +
Sbjct: 380 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 439

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+ + PN I+Y  L+ G+C  G +  A  L+ EMV +G+ P++V+   ++ G C +G+
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 499

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA E   KM    +      YN +I+G      +D A++L   + ++G+ PDV+TYNV
Sbjct: 500 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 559

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G + +++++  +M E G  PD  TY  LI  H+  + L  +    +EM   G
Sbjct: 560 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 619

Query: 481 FVPDDA 486
           F  D +
Sbjct: 620 FSADSS 625



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/422 (32%), Positives = 229/422 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC   ++  A + +  M + G  PD VTY  ++N  C+ G    A  L   M  + 
Sbjct: 210 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 269

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V  Y+ +I+ LCK G  D A  + +EM   G+  D  TY++L+   C      +  
Sbjct: 270 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 329

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  R + PD+V+FS LI +F + G+L  A   + EM + G+ PD + Y  +I+G+
Sbjct: 330 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 389

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA +M D M+ KGC  D+VTY+ ++N  C+AK + +   LF E+  +G+ P+ 
Sbjct: 390 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 449

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TL+ G C+ G +N A  LF  M  + + P +VTY  L+DG C  GE+ KA +++  
Sbjct: 450 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 509

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   +++     Y I+I+G C+   V +A+ L+  +  KG+KP +V+ N +I G C+ G 
Sbjct: 510 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+AD    KM  +G  PD  +YN LI   +    +  +  L+ +M+  G   D  T  +
Sbjct: 570 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 629

Query: 421 IL 422
           ++
Sbjct: 630 VI 631



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 229/431 (53%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           + +A  L  SM      P    +N L + + +  + D        M   G+  D  T   
Sbjct: 80  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 139

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   CRK+ +  A  +     + G  PD ++FSTL+  F   G++  A+     M    
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             PD V  + +ING C  G V EAL + D M+E G   D VTY  +LN LC++     A 
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           DLF +M ER +      ++ +I   CKDG+ + AL+LF+ M  K IK D+VTY++LI G 
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  G+ +   K+  +MI R I P+ +++  LI+ +   G + EA  L+ EM+ +GI P  
Sbjct: 320 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 379

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++ N++I G+C+     +A++    MVS+G +PD ++Y+ LIN + + + +D    L  +
Sbjct: 380 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 439

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           + ++GL+P+ ITYN ++ GFC+ G+++ ++ +   M+ +G+ P   TY  L++G      
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 499

Query: 466 LKEAFRFHDEM 476
           L +A    ++M
Sbjct: 500 LNKALEIFEKM 510



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 220/400 (55%), Gaps = 1/400 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK      A     +ME++ +    V Y+ +I++ C++G  ++A  L N M  KG
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V TY+SLI GLC  G+ D   ++L EM+   + PD  T++ L+    ++  + EA+
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++ EM  RG+APD +++++LI  F +   L  A   F  M S G  PD V Y+I+IN Y
Sbjct: 365 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 424

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V + +++  E+  KG + + +TYNT++ G C++  L  A +LF EM+ RGV P  
Sbjct: 425 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 484

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L+ G C +G +NKAL +F+ M +  +   I  YN +I G C   +++ A  L+  
Sbjct: 485 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 544

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + P+ ++Y ++I G C  G ++EA  L+ +M   G  P   + N +I+ +     
Sbjct: 545 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 604

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
              + E + +M   G   DS +   +I+  + +  +DK+F
Sbjct: 605 LISSVELIEEMKVCGFSADSSTIKMVID-MLSDRRLDKSF 643



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 81/161 (50%)

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A  L+  M+     PT +  N +     R+        F   M   G++ D  +   
Sbjct: 80  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 139

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +IN + R++ +  AF+++ +    G  PD IT++ ++ GFC +GR+ ++  ++ RM+E  
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             PD  T +TLING   +  + EA    D M++ GF PD+ 
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 240


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 171/484 (35%), Positives = 277/484 (57%), Gaps = 20/484 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC       A   L +M   G  P+ VTYNTL+ A+CR G ++ A +L++ M   G
Sbjct: 163 LVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG 222

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP + T+NS++NG+CK GR + A++V DEM++ GL+PD  +YNTL+   C+     EA 
Sbjct: 223 LKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEAL 282

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+R+G+ PD+V+F++LI +  + G L+RA+   REM+  GL  + + +T +I+G+
Sbjct: 283 SVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGF 342

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ GF+ +AL    EM +      VV YN ++NG C    + EA +L  EM  +GV PD 
Sbjct: 343 CKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDV 402

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++T++  +CK+G+ + A  L   M +  + PD +TY++LI   C+   +  A+ L+ +
Sbjct: 403 VTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKN 462

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS  + P+ ++Y  LI+G+C  G+V  A  L  EMV  G+ P +V+ + +I G  +S  
Sbjct: 463 MISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSAR 522

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L K+  E   P +I Y+ L+    R   +    AL                  
Sbjct: 523 TKEAQRLLFKLYHEEPVPANIKYDALMR-CCRNAELKSVLAL------------------ 563

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            L GFC +G M++++ +   ++++  N D S Y+ LI+GH  + N+ +A  FH +MLQ G
Sbjct: 564 -LKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCG 622

Query: 481 FVPD 484
           F P+
Sbjct: 623 FAPN 626



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 150/424 (35%), Positives = 238/424 (56%), Gaps = 1/424 (0%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P V  YN+++  L        A+   D ML  G++P+  TYN L+   C + +  EA
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  +M   G  P+ V+++TL+  F R G++DRA      M+  GL P+ V +  ++NG
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G + +A K+ DEM+++G   D V+YNT++ G C+     EA  +F EM  +G+ PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TFT+LIH  CK GN+ +A+ L   M ++ ++ + +T+  LIDGFCK G ++ A     
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M   +I P+ + Y  LINGYC +G + EA  L  EM  KG+KP +V+ +TI+  YC++G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D   A +   +M+  GV PD+I+Y++LI     E+ +  A  L   M + GL PD +TY 
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C++G +  +  +   M++ G+ PD  TY+ LING       KEA R   ++   
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE 536

Query: 480 GFVP 483
             VP
Sbjct: 537 EPVP 540



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 241/463 (52%), Gaps = 50/463 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN +CK  +++ A+    EM ++G+ PD V+YNTL+  YC+ G   EA  +   M+ KG
Sbjct: 233 VVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+ SLI+ +CK G  +RA  ++ EM + GL  +  T+  L+   C+K  + +A 
Sbjct: 293 IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDAL 352

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM +  + P +V ++ LI  +   G++D A    REM++ G+ PD V Y+ I++ Y
Sbjct: 353 LAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAY 412

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG    A ++  +MLE G + D +TY++++  LC  K L +A  LF  M+  G+ PD 
Sbjct: 413 CKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDE 472

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG---------------- 284
            T+T+LI GHCK+GN+ +AL+L D M +  + PD+VTY+ LI+G                
Sbjct: 473 VTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFK 532

Query: 285 ----------------------------------FCKVGEMEKANKLWADMISRKISPNY 310
                                             FC  G M +A+K++  ++ R  + + 
Sbjct: 533 LYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDG 592

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
             Y +LI+G+C  G+V +A     +M+  G  P   S  ++I+G    G   +AD+ + +
Sbjct: 593 SVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQ 652

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           +++     D+ +   LI+  ++E N+D    ++  M   GL+P
Sbjct: 653 LLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 208/390 (53%), Gaps = 36/390 (9%)

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G AP +++++ ++   S +  L  A  +F  M S G+ P+   Y I++   C  G   EA
Sbjct: 118 GYAPSVLAYNAVLLALS-DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           L +  +M   GC  + VTYNT++   CRA  +  A+ L + M E G+ P+  TF ++++G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP- 308
            CK G M  A  +FD M ++ + PD V+YNTL+ G+CKVG   +A  ++A+M  + I P 
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 309 ----------------------------------NYISYGILINGYCSMGHVTEAFRLWY 334
                                             N I++  LI+G+C  G + +A     
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM    I+P++V  N +I GYC  G   +A E + +M ++GV PD ++Y+T+++ + +  
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           +   AF L  +M   G++PD ITY+ ++   C + R+ D+ ++   MI  GL PD  TYT
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +LI+GH  + N++ A   HDEM++ G +PD
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPD 506


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  328 bits (841), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 167/445 (37%), Positives = 267/445 (60%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +++ A+  L +M+ KG++P+  T+N L+   CR G+L+EA  ++  MS   
Sbjct: 238 ILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNS 297

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TYN +I+G CK+GR   A  + +EM  + LSPD  TYNTL+       +  E  
Sbjct: 298 VVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGF 357

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  RG+ P+ V+++ ++  F + G++D      R+M+ +G +PD V Y  +I+ +
Sbjct: 358 KLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWH 417

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA ++ DEM  KG  MD VT NT+L  LCR + L EA DL      RG F D 
Sbjct: 418 CKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDE 477

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI G+ K    ++AL L+D M +K I P I+TYN++I G C++G+  +A     +
Sbjct: 478 VSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDE 537

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++   + P+ I+Y  +I+GYC  G V +AF+   +MV K  KP +V+CNT++ G C+ G 
Sbjct: 538 LLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGM 597

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +  +  +S+G D D++SYNT+I    +E+   +AF L+ +ME + L PD  TYN 
Sbjct: 598 LEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNA 657

Query: 421 ILTGFCRQGRMHDSELILWRMIEKG 445
           IL G    GRM D+E  + ++ EKG
Sbjct: 658 ILGGLTDAGRMKDAEEFISKIAEKG 682



 Score =  298 bits (762), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 164/487 (33%), Positives = 267/487 (54%), Gaps = 3/487 (0%)

Query: 1   MVNALCK---DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++NAL +    H I  +K    +  + GV  +T ++N LI+  C E    EA +++  M 
Sbjct: 165 LLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMR 224

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             G  P   TYN++++GLCKKGR + A+++L +M   GL P+  T+N L+V  CR   + 
Sbjct: 225 DYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLK 284

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA  +   MS+  V PD  +++ +I  F + G++  A+    EM++  L PD V Y  +I
Sbjct: 285 EAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLI 344

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG   +G   E  K+ +EM  +G   + VTYN ++    +   + E D    +M E G  
Sbjct: 345 NGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCL 404

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+ TLI  HCK G M++A  L D M +K +K D VT NT++   C+  ++++A+ L
Sbjct: 405 PDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDL 464

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
                 R    + +SYG LI GY      ++A RLW EM  K I P++++ N++I G C+
Sbjct: 465 LCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQ 524

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G  ++A + L +++  G+ PD I+YNT+I+G+ +E  ++KAF   +KM  +   PDV+T
Sbjct: 525 MGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVT 584

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            N +L G C++G +  +  +    I KG + D  +Y T+I     +    EAF   +EM 
Sbjct: 585 CNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEME 644

Query: 478 QRGFVPD 484
           ++   PD
Sbjct: 645 EKKLGPD 651



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 249/451 (55%), Gaps = 3/451 (0%)

Query: 37  INAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK---KGRCDRAKEVLDEMLQ 93
           I AY   G   +A Q+ N M   G++P + T N+L+N L +         +K V  + ++
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           +G+  +T ++N L+  SC +    EA  +  +M   G  PD ++++T++    + G+L+ 
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A     +MK+ GL P+   + I++ G CR G++ EA  + + M +   V D  TYN +++
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           G C+   + EA  L  EM    + PD  T+ TLI+G  + G+  +   L + M  + +KP
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           + VTYN ++  F K G+M++ +K    M      P+ ++Y  LI+ +C +G + EAFRL 
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLM 430

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EM  KG+K   V+ NT+++  CR     +A + L      G   D +SY TLI G+ + 
Sbjct: 431 DEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKH 490

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           E   +A  L  +M+ + ++P +ITYN ++ G C+ G+ + +   L  ++E GL PD  TY
Sbjct: 491 EKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY 550

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            T+I+G+  +  +++AF+FH++M+++ F PD
Sbjct: 551 NTIIHGYCQEGQVEKAFQFHNKMVEKNFKPD 581



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 187/347 (53%), Gaps = 23/347 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV    K  K+D     + +ME+ G  PD VTYNTLI+ +C+ G ++EAF+LM+ M  KG
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK    T N+++  LC++ + D A ++L    + G   D  +Y TL++   + E  S+A 
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM  + + P I++++++I    + G+ ++A+    E+  +GLVPD + Y  II+GY
Sbjct: 498 RLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGY 557

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A +  ++M+EK    DVVT NT+L GLC+  ML +A  LFN  + +G   D 
Sbjct: 558 CQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDA 617

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ T+I   CK+    +A +L + M +K + PD  TYN ++ G    G M+ A +  + 
Sbjct: 618 VSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISK 677

Query: 301 M-----------------------ISRKISPNYISYGILINGYCSMG 324
           +                       I ++  PN I+Y   IN  CS G
Sbjct: 678 IAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQG 724



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 3/173 (1%)

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR---SGDASKADEFLSKM 371
           I I  Y + G   +A +++  M   G++PTL++CNT++    R   S     +    +  
Sbjct: 129 ISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDF 188

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           +  GV  ++ S+N LI+G   E    +A  ++ KM + G  PD ITYN IL G C++GR+
Sbjct: 189 IKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRL 248

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +++  +L  M  KGL P+R+T+  L+ G      LKEA    + M Q   VPD
Sbjct: 249 NEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPD 301



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 23/103 (22%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LCK+ +   A   L EME+K + PD  TYN ++      G +++A + ++ ++ KG
Sbjct: 623 IILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682

Query: 61  LK-----------------------PGVFTYNSLINGLCKKGR 80
                                    P    Y++ IN LC +GR
Sbjct: 683 KSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGR 725


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  328 bits (840), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 176/490 (35%), Positives = 280/490 (57%), Gaps = 10/490 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK +++ +      E+ ++G +PD VTYNTLI++ C+ G LEEA +L   MS +G
Sbjct: 87  IINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRG 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG--LSPDTATYNTLLVESCRKENMSE 118
             P V TY+ LINGLCK GR D A+E++ EM +    + P+  TYN+ L   C++   +E
Sbjct: 147 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 206

Query: 119 AEEIFCEMSRRG---VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           A E+   + R G   V+PD V+FSTLI    + GQ D A     +M + G VP+ V Y  
Sbjct: 207 ACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNA 263

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           ++NG C+   +  A  M + M++KG   DV+TY+ +++  C+A  + EA +L + M  RG
Sbjct: 264 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 323

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  TF ++I G CK     +A  +   +  + + PD VT+N LI G CK G  E+A+
Sbjct: 324 CTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQAS 383

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSCNTIIKG 354
            L+ +M+++ + P+ +++G LI+G C  G V EA R   +++G  G+ P +V+ N ++ G
Sbjct: 384 ALFEEMVAKNMQPDVMTFGALIDGLCKAGQV-EAARDILDLMGNLGVPPNVVTYNVLVHG 442

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+SG   +  EFL +MVS G  P+S++Y +L+    R    D A  LVSK+++ G  PD
Sbjct: 443 LCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPD 502

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +TYN+++ G  + G+   +  +L  M+ KG  PD  T+     G     NL        
Sbjct: 503 TVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLR 562

Query: 475 EMLQRGFVPD 484
            +L +G +PD
Sbjct: 563 VVLAKGMLPD 572



 Score =  278 bits (710), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 144/425 (33%), Positives = 242/425 (56%), Gaps = 7/425 (1%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVL-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
           V  YN ++  LC+ G   RA E+   EM + G++P   TYNT++   C+   +    E+F
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            E+ +RG  PD+V+++TLI    + G L+ A      M S G VP+ V Y+++ING C+ 
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164

Query: 184 GFVLEALKMRDEMLEKGC--VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG--VFPD 239
           G + EA ++  EM  K C  + +++TYN+ L+GLC+  M  EA +L   + +    V PD
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 224

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF+TLI G CK G  ++A N  D M      P++VTYN L++G CK  +ME+A+ +  
Sbjct: 225 TVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIE 282

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + ++P+ I+Y +L++ +C    V EA  L + M  +G  P +V+ N+II G C+S 
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 342

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            + +A +   ++ +  + PD +++N LI G  +  N ++A AL  +M  + + PDV+T+ 
Sbjct: 343 RSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFG 402

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+ G++  +  IL  M   G+ P+  TY  L++G      ++E   F +EM+  
Sbjct: 403 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSS 462

Query: 480 GFVPD 484
           G VP+
Sbjct: 463 GCVPE 467



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 187/335 (55%), Gaps = 10/335 (2%)

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM-RDEMLEKGCVMDVVTYNTILN 213
           L +F    S+  V D   Y I++   CR G    AL++ R EM   G    +VTYNTI+N
Sbjct: 33  LKFFFVRSSSRSVAD---YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIIN 89

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLC++  L    +LF E+++RG  PD  T+ TLI   CK G++ +A  L   M+ +   P
Sbjct: 90  GLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVP 149

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRK--ISPNYISYGILINGYCSMGHVTEAFR 331
           ++VTY+ LI+G CKVG +++A +L  +M  +   + PN I+Y   ++G C      EA  
Sbjct: 150 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 209

Query: 332 LWYEMVGKGIK--PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
           L   +    ++  P  V+ +T+I G C+ G   +A      M++ G  P+ ++YN L+NG
Sbjct: 210 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNG 267

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             + + M++A A++  M ++G+ PDVITY+V++  FC+  R+ ++  +L  M  +G  P+
Sbjct: 268 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 327

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             T+ ++I+G    +   EAF+   ++  R  VPD
Sbjct: 328 VVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPD 362


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  327 bits (837), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 166/483 (34%), Positives = 274/483 (56%), Gaps = 20/483 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    ++    F  EME+    P+ VTYNT+I AYC+   ++EAF+L+ SM  +G
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG 268

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P + TYN +INGLC+ GR +    VL EM + G +PD  TYNTL+   C+  N  +A 
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQAL 328

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM R G+ PD+V++++LI    + G L+RA+ +F +M   GL P+ V YT +ING+
Sbjct: 329 VLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGF 388

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF+ EA ++ DEM+  G    +VTYN +LNG C +  + EA  L   M  +G+ PD 
Sbjct: 389 SQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDV 448

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++T+I G C+   +++A  +   M +K + PD +TY++LI G C+   + +A  L+ +
Sbjct: 449 VSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQE 508

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+++ + P+  +Y  LINGYC  G + EA  L  EM+ KG  P  V+ N +I G  +   
Sbjct: 509 MLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQAR 568

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L K+  +   P+ I+Y+TLI                S +E + +V        
Sbjct: 569 TREAKRLLLKLFYDESIPNGITYDTLIES-------------CSDIEFKSVV-------A 608

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC +G M++++ +   MI++   P+ + Y  +I+GH    N+ +A + + EM+  G
Sbjct: 609 LIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFG 668

Query: 481 FVP 483
           F+P
Sbjct: 669 FIP 671



 Score =  307 bits (787), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 162/449 (36%), Positives = 262/449 (58%), Gaps = 12/449 (2%)

Query: 45  FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR----AKEVLDEMLQMGLSPDT 100
           F+E+A  +++     G  PGV +YN++++ +    RC +    A++V  EM+  G+S + 
Sbjct: 147 FIEKALNIVDLAKLNGFMPGVLSYNAILDSIV---RCRKPVIFAEKVYREMIASGVSLNV 203

Query: 101 ATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE 160
            +YN L+   C   N+      F EM R    P++V+++T+IG + +  ++D A    R 
Sbjct: 204 FSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRS 263

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM 220
           M   GL P+ + Y ++ING CR G + E   +  EM  KG   D VTYNT++NG C+   
Sbjct: 264 MGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGN 323

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
             +A  L +EML  G+ PD  T+T+LI+  CK GN+N+A+  FD M  + ++P+ VTY +
Sbjct: 324 FHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS 383

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           LI+GF + G M++A ++W +MI     P  ++Y  L+NG+C  G + EA  L   M GKG
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           + P +VS +TII G+CR  +  +A +  ++MV +GV PD+I+Y++LI G   +  +++A 
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEAC 503

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L  +M N+ L+PD  TY  ++ G+C++G ++++  +   MI+KG  PD  TY  LING 
Sbjct: 504 DLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGL 563

Query: 461 VSQNNLKEAFR-----FHDEMLQRGFVPD 484
             Q   +EA R     F+DE +  G   D
Sbjct: 564 NKQARTREAKRLLLKLFYDESIPNGITYD 592



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 226/416 (54%), Gaps = 37/416 (8%)

Query: 106 LLVESCRKENMSEAEEIFCEMSR-RGVAPDIVSFSTLIGIFSR-NGQLDRALMYFREMKS 163
           L+V+SC   N  E      ++++  G  P ++S++ ++    R    +  A   +REM +
Sbjct: 137 LVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIA 196

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
           +G+  +   Y I+I G+C  G +   L+  +EM    C+ +VVTYNT++   C+ K + E
Sbjct: 197 SGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDE 256

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A  L   M   G+ P+  T+  +I+G C+ G + +   +   M +K   PD VTYNTL++
Sbjct: 257 AFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVN 316

Query: 284 GFCKVGEMEKANKLWADMIS-----------------------------------RKISP 308
           G+CKVG   +A  L ++M+                                    R + P
Sbjct: 317 GYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRP 376

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N ++Y  LING+   G + EA+R+W EM+  G  PT+V+ N ++ G+C SG   +A   L
Sbjct: 377 NGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL 436

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             M  +G+ PD +SY+T+I GF R + +D+AF + ++M  +G+ PD ITY+ ++ G C Q
Sbjct: 437 RGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQ 496

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            R++++  +   M+ K L PD  TYT+LING+  + +L EA   HDEM+++GF+PD
Sbjct: 497 RRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPD 552


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  326 bits (836), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 162/484 (33%), Positives = 276/484 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + ++LC+  ++  A   L +ME +G  PD ++Y+T+IN YC+ G L+   +L+  M  KG
Sbjct: 259 ITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKG 318

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TYN +I  LCK G+   A+ VL EM+  G++PD   Y TL+   C+  N+S A 
Sbjct: 319 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 378

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM +R ++PD ++++ +I    + G++  A   F EM    L PD V YT +I+GY
Sbjct: 379 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 438

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + ++ML+ G   ++VTY  + +GLC+   +  A++L +EM  +G+  + 
Sbjct: 439 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 498

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+ +L++G CK GN+++A+ L   M      PD VTY TL+D +CK  EM +A++L   
Sbjct: 499 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 558

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R++ P  +++ +L+NG+C  G + +  +L   M+ KGI P   + N++IK YC   +
Sbjct: 559 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 618

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    M ++GV PD  +YN LI G  +  NM +A+ L   M  +G    V +YN 
Sbjct: 619 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 678

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GF ++ +  ++  +  +M  +GL  DR  Y    + +  +  ++      DE +++ 
Sbjct: 679 LIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKC 738

Query: 481 FVPD 484
            V D
Sbjct: 739 LVGD 742



 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 266/472 (56%), Gaps = 1/472 (0%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLI 72
           + K+F+ E  + GV  +T +YN + ++ C+ G + EA QL+  M  +G  P V +Y+++I
Sbjct: 237 ALKVFV-EFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVI 295

Query: 73  NGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA 132
           NG C+ G   R  ++++EM   GL P+  TYN +++  C+   ++EAE +  EM   G+A
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
           PD V ++TLI  F + G +  A   F EM+   + PD + YT +I G C+ G V+EA K+
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
             EM+ K    D VTY  +++G C+   + EA  L N+ML+ G+ P+  T+T L  G CK
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            G ++ A  L   M +K ++ +I TYN+L++G CK G +++A KL  DM      P+ ++
Sbjct: 476 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 535

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y  L++ YC    +  A  L  +M+ + ++PT+V+ N ++ G+C SG     ++ L  M+
Sbjct: 536 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 595

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            +G+ P++ +YN+LI  +    NM     +   M  +G+VPD  TYN+++ G C+   M 
Sbjct: 596 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 655

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  +   M+ KG N   S+Y  LI G   +    EA    ++M + G V D
Sbjct: 656 EAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVAD 707



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 153/457 (33%), Positives = 257/457 (56%), Gaps = 1/457 (0%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKK-GRCDRAKEV 87
           D   ++         G L+EA +L + M   GL   V + N  I+ L +       A +V
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKV 240

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             E  ++G+  +TA+YN +    C+   + EA ++  +M  RG  PD++S+ST+I  + +
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+L R L    EM+  GL P+   Y  +I   C+ G V EA ++  EM+ +G   D V 
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T+++G C+   ++ A  LF+EM +R + PDF T+T +I G C+ G + +A  LF  M 
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K ++PD VTY  LIDG+CK G+M++A  L   M+   ++PN ++Y  L +G C  G V 
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 480

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  L +EM  KG++  + + N+++ G C++G+  +A + +  M   G  PD+++Y TL+
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           + + +   M +A  L+ +M ++ L P V+T+NV++ GFC  G + D E +L  M+EKG+ 
Sbjct: 541 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 600

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+ +TY +LI  +  +NN++     +  M  +G VPD
Sbjct: 601 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPD 637


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 181/522 (34%), Positives = 271/522 (51%), Gaps = 36/522 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +       K  L EME+KG  P  VTYN +I   CR G ++EAF+L   M  KG
Sbjct: 242 LINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKG 301

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   VFTY+ LI+G  K+ RC  AK +L+EM   GL P    Y  L+    R+ +  EA 
Sbjct: 302 LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAF 361

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  RGV  ++ +++ L+    + G +++A     EM   G+ PD   Y  +I GY
Sbjct: 362 RVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGY 421

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +         +  EM +   V    T   I+NGLCR   + +A  +F  M+  GV P+ 
Sbjct: 422 LKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNA 481

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TTLI GH ++G   +A+ +  +M +K ++PD++ YN++I G CK  +ME+A     +
Sbjct: 482 VIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVE 541

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI R + PN  +YG LI+GYC  G +  A R + EM+G GI P  V C  +I GYC+ G 
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A      M+   V PD  +Y+ LI+G +R   +  A  L+S+   +GLVPDV TYN 
Sbjct: 602 TTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNS 661

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNP-------------------------------- 448
           I++GFC+QG +  +  +   M +KG++P                                
Sbjct: 662 IISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG 721

Query: 449 ---DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
              +  TY T+I+G+    NL +AFR  DEM  +G VP D+F
Sbjct: 722 LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG-VPPDSF 762



 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 163/487 (33%), Positives = 271/487 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  +   AK+ L EM  KG+ P  V Y  LI+ + R+G   EAF++   M  +G
Sbjct: 312 LIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARG 371

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  +FTYN+L+ G+CK G  ++A  +L+EM+ +G+ PDT TYN ++    +++N S  +
Sbjct: 372 VKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVK 431

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM +  + P   +   +I    R+G ++ A   F  M S G+ P+ V+YT +I G+
Sbjct: 432 DLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGH 491

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA+++   M +KG   DV+ YN+++ GLC+++ + EA D   EM+ERG+ P+ 
Sbjct: 492 VQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNV 551

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+  LIHG+CK G M  A   F  M    I P+ V    LIDG+CK G   +A  ++  
Sbjct: 552 YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRC 611

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R + P+  +Y  LI+G    G +  A  L  E + KG+ P + + N+II G+C+ G 
Sbjct: 612 MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +    M  +G+ P+ I+YN LING  +   +++A  L   +  +GL  + +TY  
Sbjct: 672 IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+ G+C+ G +  +  +   M  KG+ PD   Y+ LI+G   + N ++A     E +Q+G
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791

Query: 481 FVPDDAF 487
           F    + 
Sbjct: 792 FASTSSL 798



 Score =  317 bits (812), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 161/484 (33%), Positives = 271/484 (55%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+    K+      K  L EM++  + P   T   +IN  CR G +E+A ++   M   G
Sbjct: 417 MIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG 476

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP    Y +LI G  ++GR   A  +L  M + G+ PD   YN++++  C+   M EA+
Sbjct: 477 VKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAK 536

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   EM  RG+ P++ ++  LI  + ++G++  A  YF+EM   G+ P++V+ T +I+GY
Sbjct: 537 DYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGY 596

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   EA  +   ML +    DV TY+ +++GL R   L  A +L +E LE+G+ PD 
Sbjct: 597 CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV 656

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ ++I G CK G + KA  L + M QK I P+I+TYN LI+G CK GE+E+A +L+  
Sbjct: 657 FTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDG 716

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + ++ N ++Y  +I+GYC  G++++AFRL+ EM  KG+ P     + +I G  + G+
Sbjct: 717 IPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA     + V +G    S S N L++GF +   + +A  L+  M ++ + PD +TY +
Sbjct: 777 TEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTI 835

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C+ G + ++E     M ++ L P+  TYT L++G+       E F   DEM+ + 
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKD 895

Query: 481 FVPD 484
             PD
Sbjct: 896 IEPD 899



 Score =  307 bits (787), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 164/480 (34%), Positives = 267/480 (55%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+   I+ A      M   GV P+ V Y TLI  + +EG  +EA +++  M  KG
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V  YNS+I GLCK  + + AK+ L EM++ GL P+  TY  L+   C+   M  A+
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVAD 571

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F EM   G+AP+ V  + LI  + + G    A   FR M    + PD   Y+ +I+G 
Sbjct: 572 RYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGL 631

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            RNG +  A+++  E LEKG V DV TYN+I++G C+   + +A  L   M ++G+ P+ 
Sbjct: 632 LRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNI 691

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G CK G + +A  LFD +  K +  + VTY T+IDG+CK G + KA +L+ +
Sbjct: 692 ITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDE 751

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+   Y  LI+G    G+  +A  L+ E V KG   T  S N ++ G+C+SG 
Sbjct: 752 MTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAST-SSLNALMDGFCKSGK 810

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A++ L  MV + V PD ++Y  LI+   +   + +A      M+ + L+P+ +TY  
Sbjct: 811 VIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTA 870

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L+G+   GR  +   +   MI K + PD  T++ +I+ H+ + +  +  +  D+ML++G
Sbjct: 871 LLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKG 930



 Score =  287 bits (734), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 156/518 (30%), Positives = 273/518 (52%), Gaps = 34/518 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++    ++ +   A   L  M++KGV PD + YN++I   C+   +EEA   +  M  +G
Sbjct: 487  LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERG 546

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            LKP V+TY +LI+G CK G    A     EML  G++P+      L+   C++ + +EA 
Sbjct: 547  LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEAT 606

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             IF  M  R V PD+ ++S LI    RNG+L  A+    E    GLVPD   Y  II+G+
Sbjct: 607  SIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGF 666

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+ G + +A ++ + M +KG   +++TYN ++NGLC+A  +  A +LF+ +  +G+  + 
Sbjct: 667  CKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNA 726

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY---------------------- 278
             T+ T+I G+CK GN++KA  LFD MT K + PD   Y                      
Sbjct: 727  VTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLE 786

Query: 279  ------------NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
                        N L+DGFCK G++ +AN+L  DM+ + + P++++Y ILI+ +C  G +
Sbjct: 787  SVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFL 846

Query: 327  TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             EA + + +M  + + P  ++   ++ GY  +G  S+      +M+++ ++PD ++++ +
Sbjct: 847  KEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVM 906

Query: 387  INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
            I+  ++E +  K   LV  M  +G        +V++   CR+  + +   +L ++ E+GL
Sbjct: 907  IDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGL 966

Query: 447  NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            N   +T +TL+        +  A R    M++  +VPD
Sbjct: 967  NLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPD 1004



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 261/477 (54%), Gaps = 3/477 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++  CK  ++  A  +  EM   G+ P+ V    LI+ YC+EG   EA  +   M G+ 
Sbjct: 557  LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            + P V TY++LI+GL + G+   A E+L E L+ GL PD  TYN+++   C++  + +A 
Sbjct: 617  VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++   M ++G++P+I++++ LI    + G+++RA   F  +   GL  + V Y  II+GY
Sbjct: 677  QLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE-ADDLFNEMLERGVFPD 239
            C++G + +A ++ DEM  KG   D   Y+ +++G CR +  TE A  LF E +++G F  
Sbjct: 737  CKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG-CRKEGNTEKALSLFLESVQKG-FAS 794

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +   L+ G CK G + +A  L + M  K +KPD VTY  LID  CK G +++A + + 
Sbjct: 795  TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFV 854

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            DM  R + PN ++Y  L++GY   G  +E F L+ EM+ K I+P  V+ + +I  + + G
Sbjct: 855  DMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEG 914

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            D  K  + +  M+ +G +      + LI+   R+E++ +   ++ K+E QGL   + T +
Sbjct: 915  DHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCS 974

Query: 420  VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
             ++  F + G+M  +  +L  M+     PD +    LIN      + + A  F  +M
Sbjct: 975  TLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 227/454 (50%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           V +  LI+ Y ++G  +EA          G   G+   N L++ L K  + +      + 
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML+  +  D  TY  L+    R  N  E + +  EM  +G +P +V+++ +IG   R G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D A    + M   GLV D   Y+I+I+G+ +     EA  M +EM  KG     V Y  
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +++G  R     EA  +  EML RGV  + +T+  L+ G CK G+M KA  L + M    
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           IKPD  TYN +I+G+ K     +   L ++M    + P   + G++ING C  G + +A 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           R++  MV  G+KP  V   T+IKG+ + G   +A   L  M  +GV PD + YN++I G 
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +   M++A   + +M  +GL P+V TY  ++ G+C+ G M  ++     M+  G+ P+ 
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              T LI+G+  + +  EA      ML R   PD
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPD 620



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 136/419 (32%), Positives = 209/419 (49%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            +  LI+G  KKG  D A        + G        N LL +  +   +      +  M
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
               V  D+ +++ LI    R G          EM+  G  P  V Y ++I G CR G V
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEV 287

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            EA +++  M +KG V DV TY+ +++G  + K  TEA  +  EM  +G+ P    +T L
Sbjct: 288 DEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTAL 347

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I G  + G+  +A  + + M  + +K ++ TYN L+ G CK G+MEKA+ L  +MI   I
Sbjct: 348 IDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGI 407

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+  +Y  +I GY    + +    L  EM    + PT  +C  II G CR G    A  
Sbjct: 408 KPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASR 467

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               MVS GV P+++ Y TLI G V+E    +A  ++  M+ +G+ PDV+ YN ++ G C
Sbjct: 468 VFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLC 527

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +  +M +++  L  MIE+GL P+  TY  LI+G+     ++ A R+  EML  G  P+D
Sbjct: 528 KSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 75/339 (22%)

Query: 215 LCRAKMLTEADDLFNEML-----------------------------------ERGVFPD 239
           LC +++ + AD + N+M+                                   +RGV   
Sbjct: 111 LCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGV--- 167

Query: 240 FYTFTTLIHGHCKDGNMNKALNLF-----------------------------------D 264
              F  LI G+ K G  ++A++ F                                   +
Sbjct: 168 --VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYN 225

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M + ++  D+ TY  LI+   + G  ++  +L  +M  +  SP+ ++Y ++I G C  G
Sbjct: 226 GMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAG 285

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EAF L   M  KG+   + + + +I G+ +    ++A   L +M S+G+ P  ++Y 
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI+GF+R+ +  +AF +  +M  +G+  ++ TYN ++ G C+ G M  ++ +L  MI  
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+ PD  TY  +I G++ + N         EM +   VP
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVP 444


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  325 bits (833), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 170/518 (32%), Positives = 289/518 (55%), Gaps = 35/518 (6%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +NA CK  K++ A     +ME+ GV P+ VTYN LI+  C+ G L+EAF+    M   G+
Sbjct: 253 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
              + TY+ LINGL K  + + A  VL E L+ G +P+   YNTL+   C+  N+ +A  
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA--------------------------- 154
           I  +M  +G+ P+ V+ +++I  F + GQ+++A                           
Sbjct: 373 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 432

Query: 155 --------LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
                   L + REM    + P++ L T ++ G C+ G   +A+++   +LEKG   ++V
Sbjct: 433 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 492

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T N +++GLC+   + EA  L  +MLERG   D  T+ TLI G CK+G + +   L   M
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ I+PD  TYN LI G C++G++++A  LW +  SR + PN  +YG++I+GYC    +
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 612

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            E  +L+ E++ + ++   V  NT+I+ YCR+G+  +A +    M S+G+ P + +Y++L
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 672

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G      M+ A  L+ +M  +GL+P+V+ Y  ++ G+C+ G+M     +L  M    +
Sbjct: 673 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +P++ TYT +I+G+    ++K A +   EM+ +G VPD
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 770



 Score =  315 bits (806), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 165/489 (33%), Positives = 276/489 (56%), Gaps = 8/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K + A   L E  +KG  P+ V YNTLI+ YC+ G L +A ++   M  KG
Sbjct: 322 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 381

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T NS+I G CK G+ ++A+ +L+EML  G S +   + T++   C       A 
Sbjct: 382 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 441

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMK---SAGLVPDNVLYTII 176
               EM  R + P+    +TL+G   + G+   A+ ++FR ++    A LV  N L    
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL---- 497

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I+G C+ G + EA+++  +MLE+G V+D +TYNT+++G C+   + E   L  EM+++G+
Sbjct: 498 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 557

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD +T+  LIHG C+ G +++A+NL++    + + P++ TY  +IDG+CK  ++E+  K
Sbjct: 558 EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEK 617

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+ +++++ +  N + Y  LI  YC  G+  EAF+L  +M  KGI PT  + +++I G C
Sbjct: 618 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMC 677

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
             G    A   + +M  EG+ P+ + Y  LI G+ +   MDK   ++ +M +  + P+ I
Sbjct: 678 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 737

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY V++ G+ + G M  +  +L  M+ KG+ PD  TY  L NG   +  ++E F+  D M
Sbjct: 738 TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYM 797

Query: 477 LQRGFVPDD 485
            Q G   D+
Sbjct: 798 SQEGLPLDE 806



 Score =  278 bits (710), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 258/466 (55%), Gaps = 1/466 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           +  KGV+P   T   L+++  +   LE+++ +  +M  +G+ P V+ +++ IN  CK G+
Sbjct: 203 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGK 261

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A ++  +M ++G+SP+  TYN L+   C+  N+ EA     +M + GV   ++++S 
Sbjct: 262 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 321

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    +  + + A    +E    G  P+ V+Y  +I+GYC+ G + +AL++R +M+ KG
Sbjct: 322 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 381

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              + VT N+I+ G C+   + +A+ +  EML RG   +   FTT+IH  C +     AL
Sbjct: 382 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 441

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
                M  ++++P+     TL+ G CK G+   A +LW  ++ +    N ++   LI+G 
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 501

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G++ EA RL  +M+ +G     ++ NT+I G C+ G   +  +   +MV +G++PD+
Sbjct: 502 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 561

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YN LI+G  R   +D+A  L ++ +++ LVP+V TY V++ G+C+  ++ + E +   
Sbjct: 562 FTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTE 621

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           ++ + L  +   Y TLI  +    N  EAF+ HD+M  +G  P  A
Sbjct: 622 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 667



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/390 (35%), Positives = 221/390 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC + + +SA  FL EM  + + P+     TL+   C+EG   +A +L   +  KG
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               + T N+LI+GLCK G    A  +L +ML+ G   D  TYNTL+   C++  + E  
Sbjct: 487 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 546

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM ++G+ PD  +++ LI    R G+LD A+  + E KS  LVP+   Y ++I+GY
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 606

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + E  K+  E+L +   ++ V YNT++   CR     EA  L ++M  +G+ P  
Sbjct: 607 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 666

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LIHG C  G M  A  L D M ++ + P++V Y  LI G+CK+G+M+K   +  +
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 726

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  I PN I+Y ++I+GY   G +  A +L +EMVGKGI P  V+ N +  G+C+ G 
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 786

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF 390
             +  +    M  EG+  D I+Y TL++G+
Sbjct: 787 IEEGFKICDYMSQEGLPLDEITYTTLVHGW 816



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 228/435 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +++ A+  L EM  +G   +   + T+I+  C     E A + +  M  + 
Sbjct: 392 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 451

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P      +L+ GLCK+G+   A E+   +L+ G   +  T N L+   C+  NM EA 
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  RG   D ++++TLI    + G+++       EM   G+ PD   Y ++I+G 
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EA+ + +E   +  V +V TY  +++G C+A  + E + LF E+L + +  + 
Sbjct: 572 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 631

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TLI  +C++GN  +A  L D M  K I P   TY++LI G C +G ME A  L  +
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 691

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + PN + Y  LI GYC +G + +   +  EM    I P  ++   +I GY +SGD
Sbjct: 692 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 751

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A + L +MV +G+ PD+++YN L NGF +E  +++ F +   M  +GL  D ITY  
Sbjct: 752 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTT 811

Query: 421 ILTGFCRQGRMHDSE 435
           ++ G+ +   + + E
Sbjct: 812 LVHGWQQPSALTNQE 826



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 149/264 (56%), Gaps = 1/264 (0%)

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A  +F  +  +GVFP   T T L+    K   + K+  +F+ M Q  + PD+  ++T I+
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAIN 254

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
            FCK G++E A +L+ DM    +SPN ++Y  LI+G C  G++ EAFR   +MV  G+  
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           TL++ + +I G  +    ++A+  L + + +G  P+ + YNTLI+G+ +  N+  A  + 
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
             M ++G+ P+ +T N I+ GFC+ G+M  +E IL  M+ +G + +   +TT+I+     
Sbjct: 375 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 434

Query: 464 NNLKEAFRFHDEMLQRGFVPDDAF 487
           +  + A RF  EML R   P+D  
Sbjct: 435 SRFESALRFLREMLLRNMRPNDGL 458


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  325 bits (833), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 152/453 (33%), Positives = 268/453 (59%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ +C+  +I  A   L  ME KG  PD ++Y+T++N YCR G L++ ++L+  M  KG
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  + Y S+I  LC+  +   A+E   EM++ G+ PDT  Y TL+   C++ ++  A 
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F EM  R + PD+++++ +I  F + G +  A   F EM   GL PD+V +T +INGY
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A ++ + M++ GC  +VVTY T+++GLC+   L  A++L +EM + G+ P+ 
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ ++++G CK GN+ +A+ L        +  D VTY TL+D +CK GEM+KA ++  +
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P  +++ +L+NG+C  G + +  +L   M+ KGI P   + N+++K YC   +
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      M S GV PD  +Y  L+ G  +  NM +A+ L  +M+ +G    V TY+V
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           ++ GF ++ +  ++  +  +M  +GL  D+  +
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704



 Score =  312 bits (800), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 160/481 (33%), Positives = 282/481 (58%), Gaps = 1/481 (0%)

Query: 5   LCKD-HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           L KD +K  +A +   E  + GV  +  +YN +I+  C+ G ++EA  L+  M  KG  P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V +Y++++NG C+ G  D+  ++++ M + GL P++  Y +++   CR   ++EAEE F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM R+G+ PD V ++TLI  F + G +  A  +F EM S  + PD + YT II+G+C+ 
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G ++EA K+  EM  KG   D VT+  ++NG C+A  + +A  + N M++ G  P+  T+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           TTLI G CK+G+++ A  L   M +  ++P+I TYN++++G CK G +E+A KL  +  +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             ++ + ++Y  L++ YC  G + +A  +  EM+GKG++PT+V+ N ++ G+C  G    
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
            ++ L+ M+++G+ P++ ++N+L+  +    N+  A A+   M ++G+ PD  TY  ++ 
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G C+   M ++  +   M  KG +   STY+ LI G + +    EA    D+M + G   
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699

Query: 484 D 484
           D
Sbjct: 700 D 700



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 129/233 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LCK   I+ A   + E E  G+  DTVTY TL++AYC+ G +++A +++  M GKG
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P + T+N L+NG C  G  +  +++L+ ML  G++P+  T+N+L+ + C + N+  A 
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I+ +M  RGV PD  ++  L+    +   +  A   F+EMK  G       Y+++I G+
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            +    LEA ++ D+M  +G   D   ++   +   + K      D  +E++E
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 152/453 (33%), Positives = 268/453 (59%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ +C+  +I  A   L  ME KG  PD ++Y+T++N YCR G L++ ++L+  M  KG
Sbjct: 695  VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            LKP  + Y S+I  LC+  +   A+E   EM++ G+ PDT  Y TL+   C++ ++  A 
Sbjct: 755  LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            + F EM  R + PD+++++ +I  F + G +  A   F EM   GL PD+V +T +INGY
Sbjct: 815  KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 874

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+ G + +A ++ + M++ GC  +VVTY T+++GLC+   L  A++L +EM + G+ P+ 
Sbjct: 875  CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +T+ ++++G CK GN+ +A+ L        +  D VTY TL+D +CK GEM+KA ++  +
Sbjct: 935  FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 994

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M+ + + P  +++ +L+NG+C  G + +  +L   M+ KGI P   + N+++K YC   +
Sbjct: 995  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
               A      M S GV PD  +Y  L+ G  +  NM +A+ L  +M+ +G    V TY+V
Sbjct: 1055 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 1114

Query: 421  ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            ++ GF ++ +  ++  +  +M  +GL  D+  +
Sbjct: 1115 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147



 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 160/481 (33%), Positives = 282/481 (58%), Gaps = 1/481 (0%)

Query: 5    LCKD-HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            L KD +K  +A +   E  + GV  +  +YN +I+  C+ G ++EA  L+  M  KG  P
Sbjct: 663  LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 722

Query: 64   GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
             V +Y++++NG C+ G  D+  ++++ M + GL P++  Y +++   CR   ++EAEE F
Sbjct: 723  DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 782

Query: 124  CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
             EM R+G+ PD V ++TLI  F + G +  A  +F EM S  + PD + YT II+G+C+ 
Sbjct: 783  SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 842

Query: 184  GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
            G ++EA K+  EM  KG   D VT+  ++NG C+A  + +A  + N M++ G  P+  T+
Sbjct: 843  GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902

Query: 244  TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            TTLI G CK+G+++ A  L   M +  ++P+I TYN++++G CK G +E+A KL  +  +
Sbjct: 903  TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962

Query: 304  RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
              ++ + ++Y  L++ YC  G + +A  +  EM+GKG++PT+V+ N ++ G+C  G    
Sbjct: 963  AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1022

Query: 364  ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
             ++ L+ M+++G+ P++ ++N+L+  +    N+  A A+   M ++G+ PD  TY  ++ 
Sbjct: 1023 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 1082

Query: 424  GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            G C+   M ++  +   M  KG +   STY+ LI G + +    EA    D+M + G   
Sbjct: 1083 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 1142

Query: 484  D 484
            D
Sbjct: 1143 D 1143



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 129/233 (55%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +VN LCK   I+ A   + E E  G+  DTVTY TL++AYC+ G +++A +++  M GKG
Sbjct: 940  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            L+P + T+N L+NG C  G  +  +++L+ ML  G++P+  T+N+L+ + C + N+  A 
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 1059

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             I+ +M  RGV PD  ++  L+    +   +  A   F+EMK  G       Y+++I G+
Sbjct: 1060 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1119

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +    LEA ++ D+M  +G   D   ++   +   + K      D  +E++E
Sbjct: 1120 LKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  324 bits (831), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 170/518 (32%), Positives = 289/518 (55%), Gaps = 35/518 (6%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +NA CK  K++ A     +ME+ GV P+ VTYN LI+  C+ G L+EAF+    M   G+
Sbjct: 320 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 379

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
              + TY+ LINGL K  + + A  VL E L+ G +P+   YNTL+   C+  N+ +A  
Sbjct: 380 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 439

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA--------------------------- 154
           I  +M  +G+ P+ V+ +++I  F + GQ+++A                           
Sbjct: 440 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 499

Query: 155 --------LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
                   L + REM    + P++ L T ++ G C+ G   +A+++   +LEKG   ++V
Sbjct: 500 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 559

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T N +++GLC+   + EA  L  +MLERG   D  T+ TLI G CK+G + +   L   M
Sbjct: 560 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 619

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ I+PD  TYN LI G C++G++++A  LW +  SR + PN  +YG++I+GYC    +
Sbjct: 620 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 679

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            E  +L+ E++ + ++   V  NT+I+ YCR+G+  +A +    M S+G+ P + +Y++L
Sbjct: 680 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 739

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G      M+ A  L+ +M  +GL+P+V+ Y  ++ G+C+ G+M     +L  M    +
Sbjct: 740 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 799

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +P++ TYT +I+G+    ++K A +   EM+ +G VPD
Sbjct: 800 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 837



 Score =  304 bits (778), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 159/473 (33%), Positives = 268/473 (56%), Gaps = 8/473 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K + A   L E  +KG  P+ V YNTLI+ YC+ G L +A ++   M  KG
Sbjct: 389 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 448

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T NS+I G CK G+ ++A+ +L+EML  G S +   + T++   C       A 
Sbjct: 449 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 508

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKS---AGLVPDNVLYTII 176
               EM  R + P+    +TL+G   + G+   A+ ++FR ++    A LV  N L    
Sbjct: 509 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL---- 564

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I+G C+ G + EA+++  +MLE+G V+D +TYNT+++G C+   + E   L  EM+++G+
Sbjct: 565 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 624

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD +T+  LIHG C+ G +++A+NL++    + + P++ TY  +IDG+CK  ++E+  K
Sbjct: 625 EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEK 684

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+ +++++ +  N + Y  LI  YC  G+  EAF+L  +M  KGI PT  + +++I G C
Sbjct: 685 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMC 744

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
             G    A   + +M  EG+ P+ + Y  LI G+ +   MDK   ++ +M +  + P+ I
Sbjct: 745 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 804

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           TY V++ G+ + G M  +  +L  M+ KG+ PD  TY  L NG   +  ++E 
Sbjct: 805 TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857



 Score =  277 bits (709), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 258/466 (55%), Gaps = 1/466 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           +  KGV+P   T   L+++  +   LE+++ +  +M  +G+ P V+ +++ IN  CK G+
Sbjct: 270 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGK 328

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A ++  +M ++G+SP+  TYN L+   C+  N+ EA     +M + GV   ++++S 
Sbjct: 329 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 388

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    +  + + A    +E    G  P+ V+Y  +I+GYC+ G + +AL++R +M+ KG
Sbjct: 389 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 448

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              + VT N+I+ G C+   + +A+ +  EML RG   +   FTT+IH  C +     AL
Sbjct: 449 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 508

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
                M  ++++P+     TL+ G CK G+   A +LW  ++ +    N ++   LI+G 
Sbjct: 509 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 568

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G++ EA RL  +M+ +G     ++ NT+I G C+ G   +  +   +MV +G++PD+
Sbjct: 569 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 628

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YN LI+G  R   +D+A  L ++ +++ LVP+V TY V++ G+C+  ++ + E +   
Sbjct: 629 FTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTE 688

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           ++ + L  +   Y TLI  +    N  EAF+ HD+M  +G  P  A
Sbjct: 689 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 734



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 192/338 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCK+ K   A      + +KG   + VT N LI+  C+ G ++EA +L+  M  +G
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 TYN+LI+G CK+G+ +   ++  EM++ G+ PDT TYN L+   CR   + EA 
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ E   R + P++ ++  +I  + +  +++     F E+ +  L  ++V+Y  +I  Y
Sbjct: 649 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 708

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG  +EA K+ D+M  KG      TY+++++G+C    + +A  L +EM + G+ P+ 
Sbjct: 709 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 768

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T LI G+CK G M+K +N+   M+   I P+ +TY  +IDG+ K G+M+ A KL  +
Sbjct: 769 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 828

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           M+ + I P+ ++Y +L NG+C  G + E   L  + VG
Sbjct: 829 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVG 866



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 149/264 (56%), Gaps = 1/264 (0%)

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A  +F  +  +GVFP   T T L+    K   + K+  +F+ M Q  + PD+  ++T I+
Sbjct: 263 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAIN 321

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
            FCK G++E A +L+ DM    +SPN ++Y  LI+G C  G++ EAFR   +MV  G+  
Sbjct: 322 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 381

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           TL++ + +I G  +    ++A+  L + + +G  P+ + YNTLI+G+ +  N+  A  + 
Sbjct: 382 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 441

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
             M ++G+ P+ +T N I+ GFC+ G+M  +E IL  M+ +G + +   +TT+I+     
Sbjct: 442 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 501

Query: 464 NNLKEAFRFHDEMLQRGFVPDDAF 487
           +  + A RF  EML R   P+D  
Sbjct: 502 SRFESALRFLREMLLRNMRPNDGL 525


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  324 bits (831), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 167/486 (34%), Positives = 276/486 (56%), Gaps = 3/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           ++ AL  + + D  +    EM Q G+ P  VTYNTL++++ REG +++A +L+  M  + 
Sbjct: 202 VLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARP 261

Query: 60  -GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G  P   TYN +INGL +KG  ++A +++D M +M       T+N L+     + ++ +
Sbjct: 262 GGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEK 320

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  EM   G+ P +V+++T+I    R+G ++ A M F EM++ GL+PD + Y  +IN
Sbjct: 321 AGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLIN 380

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYC+ G + EAL +  ++   G    V+TYN +L+G CR   L EA     EM+E+G  P
Sbjct: 381 GYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQP 440

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+T L++G  K  N+      FD M  K ++PD   YNT I     +G   +A +L 
Sbjct: 441 DVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLT 500

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             MISR IS + ++Y I ++G C  G++ +A+ LW +MV  G++P  ++   +I  +C  
Sbjct: 501 EVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCER 560

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A +    M+  G+ P +++Y   I+ + R  N+  A+    KM  +G+ P+ +TY
Sbjct: 561 GRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTY 620

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           NV++   CR GR + +      M+E+GL+P++ TYT LI+G+  + N +EA R + EM Q
Sbjct: 621 NVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQ 680

Query: 479 RGFVPD 484
            G  PD
Sbjct: 681 HGIHPD 686



 Score =  305 bits (780), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 157/461 (34%), Positives = 256/461 (55%), Gaps = 3/461 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK--GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++++  ++ ++D A   L EME +  G  P  VTYN +IN   R+G LE+A QL++ M  
Sbjct: 237 LLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR- 295

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
              K   FT+N LI G   +G  ++A  +  EM   G+ P   TYNT++    R  N+  
Sbjct: 296 MSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEA 355

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A   F EM   G+ PD++++++LI  + + G L  AL  F ++K AGL P  + Y I+++
Sbjct: 356 ARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLD 415

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYCR G + EA + + EM+E+GC  DV TY  ++NG  + + L    + F+EML +G+ P
Sbjct: 416 GYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQP 475

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D + + T I      G+ ++A  L ++M  + I  D VTYN  +DG CK G ++ A  LW
Sbjct: 476 DCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLW 535

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+S  + P+ I+Y  LI+ +C  G + EA  ++  M+  G+ P+ V+    I  YCR 
Sbjct: 536 MKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRR 595

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+   A  +  KM+ EGV P+ ++YN LI+   R    + A+    +M  +GL P+  TY
Sbjct: 596 GNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTY 655

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            +++ G C++G   ++  +   M + G++PD  T+  L  G
Sbjct: 656 TLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKG 696



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 139/432 (32%), Positives = 237/432 (54%), Gaps = 3/432 (0%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M+  G+ P +   N ++  L  + R D  + V  EMLQ+G+ P   TYNTLL    R+  
Sbjct: 187 MAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGR 246

Query: 116 MSEAEEIFCEMSRR--GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + +A ++  EM  R  G  P  V+++ +I   +R G+L++A      M+ +        +
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA-SAFTF 305

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +I GY   G V +A  ++ EM  +G V  VVTYNTI++G+ R+  +  A   F EM  
Sbjct: 306 NPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA 365

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+ PD  T+ +LI+G+CK GN+ +AL LF  + +  + P ++TYN L+DG+C++G++E+
Sbjct: 366 MGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEE 425

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A +   +M+ +   P+  +Y IL+NG   + ++      + EM+ KG++P   + NT I 
Sbjct: 426 ARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRIS 485

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
                G  S+A +    M+S G+  D+++YN  ++G  +  N+  A+ L  KM + GL P
Sbjct: 486 AELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQP 545

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D ITY  ++   C +GR+ ++  I   M+  GL P   TYT  I+ +  + NL  A+ + 
Sbjct: 546 DCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWF 605

Query: 474 DEMLQRGFVPDD 485
            +ML+ G  P++
Sbjct: 606 QKMLEEGVRPNE 617



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 147/293 (50%), Gaps = 36/293 (12%)

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           F EM   GV P       ++     +   +   +++  M Q  I+P IVTYNTL+D F +
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 288 VGEMEKANKLWADMISRKIS--PNYISYGILIN--------------------------- 318
            G +++A KL  +M +R     P+ ++Y ++IN                           
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAF 303

Query: 319 -------GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
                  GY + G V +A  L  EM  +GI PT+V+ NTII G  RSG+   A     +M
Sbjct: 304 TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM 363

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            + G+ PD I+YN+LING+ +  N+ +A  L   ++  GL P V+TYN++L G+CR G +
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++      M+E+G  PD STYT L+NG     NL     F DEML +G  PD
Sbjct: 424 EEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPD 476



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 3/227 (1%)

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L  F  M    + P I   N ++         +    ++A+M+   I P+ ++Y  L++ 
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 320 YCSMGHVTEAFRLWYEMVGK--GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +   G V +A +L  EM  +  G  P+ V+ N +I G  R G+  KA + + +M      
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKK 299

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
             + ++N LI G+    +++KA AL  +MEN+G+VP V+TYN I+ G  R G +  + + 
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              M   GL PD  TY +LING+    NLKEA     ++ + G  P 
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPS 406


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  323 bits (828), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 156/458 (34%), Positives = 272/458 (59%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+ + +D +   L +M + G++PD +T+N LIN  C EG ++EA +L N M  +G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V +Y ++INGLCK G    A +V  +M Q G  P+  TY+T++   C+   +++A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   EM  RG+ P++ ++++++  F   GQL+ A   F+EM    ++P+ V +TI+++G 
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  + + M EKG   D+ TYN +++G C  +++ EA  +F  M+ +G  P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  LI+G+CK   M++A +L   M  K++ PD VTY+TL+ G C++G  ++A  L+ +
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    PN ++Y IL++G+C  GH+ EA +L   M  K ++P +V    +I+G   +G 
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E  SK+  +G  PD  +Y  +I G ++E   D+A+ L  KME+ G +P+  +YNV
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++ GF +      +  ++  M+ K  + + ST+  L++
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 154/474 (32%), Positives = 263/474 (55%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A      M +    P  V +   + ++ ++        L N M    +   V++ N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LIN LC+    D +  VL +M ++G+ PD  T+N L+   C +  + EA E+F EM +RG
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P+++S++T+I    + G    A+  F++M+  G  P+ V Y+ II+  C++  V +A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           +   EM+E+G   +V TYN+I++G C    L EA  LF EM+ R V P+  TFT L+ G 
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+G +++A  +F+ MT+K ++PDI TYN L+DG+C    M +A K++  MI +  +P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            SY ILINGYC    + EA  L  EM  K + P  V+ +T+++G C+ G   +A     +
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M S G  P+ ++Y  L++GF +  ++D+A  L+  M+ + L P+++ Y +++ G    G+
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  ++ +  ++   G  PD  TYT +I G + +    EA+    +M   GF+P+
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 547



 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 258/465 (55%), Gaps = 1/465 (0%)

Query: 18  LC-EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           LC +M+   V  +  + N LIN  CR   ++ +  ++  M   G+ P   T+N+LINGLC
Sbjct: 115 LCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLC 174

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
            +G+   A E+ +EM++ G  P+  +Y T++   C+  N S A ++F +M + G  P++V
Sbjct: 175 NEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVV 234

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++ST+I    ++  ++ A+ +  EM   G+ P+   Y  I++G+C  G + EA ++  EM
Sbjct: 235 TYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           + +  + + VT+  +++GLC+  M++EA  +F  M E+GV PD  T+  L+ G+C    M
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM 354

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           N+A  +F+IM +K   P   +YN LI+G+CK   M++A  L A+M  + ++P+ ++Y  L
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + G C +G   EA  L+ EM   G  P LV+   ++ G+C+ G   +A + L  M  + +
Sbjct: 415 MQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
           +P+ + Y  LI G      ++ A  L SK+   G  PD+ TY V++ G  ++G   ++  
Sbjct: 475 EPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYD 534

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +  +M + G  P+  +Y  +I G +   +   A R  DEM+ + F
Sbjct: 535 LFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRF 579



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 125/253 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C    ++ AK     M +KG  P   +YN LIN YC+   ++EA  L+  M  K 
Sbjct: 344 LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TY++L+ GLC+ GR   A  +  EM   G  P+  TY  LL   C+  ++ EA 
Sbjct: 404 LNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEAL 463

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M  + + P+IV ++ LI      G+L+ A   F ++   G  PD   YT++I G 
Sbjct: 464 KLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGL 523

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA  +  +M + G + +  +YN ++ G  + +  + A  L +EM+ +    + 
Sbjct: 524 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNL 583

Query: 241 YTFTTLIHGHCKD 253
            TF  L+    +D
Sbjct: 584 STFQMLLDLESQD 596



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 51/109 (46%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K++ AK    ++   G  PD  TY  +I    +EG  +EA+ L   M   G  P   +YN
Sbjct: 493 KLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYN 552

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            +I G  +      A  ++DEM+    S + +T+  LL    + E +S+
Sbjct: 553 VMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEIISQ 601


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  323 bits (828), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/453 (33%), Positives = 266/453 (58%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ +C+  +I+ A   L  ME KG  PD ++Y+T+IN YCR G L++ ++L+  M  KG
Sbjct: 675  VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKG 734

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            LKP  +TY S+I  LC+  +   A+E   EM+  G+ PDT  Y TL+   C++ ++  A 
Sbjct: 735  LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAAS 794

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            + F EM  R + PD+++++ +I  F + G +  A   F EM   GL PD + +T ++NGY
Sbjct: 795  KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGY 854

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+ G + +A ++ + M++ GC  +VVTY T+++GLC+   L  A++L +EM + G+ P+ 
Sbjct: 855  CKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 914

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +T+ ++++G CK GN+ +A+ L        +  D VTY TL+D +CK GEM+KA ++  +
Sbjct: 915  FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTE 974

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M+ + + P  +++ +L+NG+C  G + +  +L   M+ KGI P   + N ++K YC   +
Sbjct: 975  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNN 1034

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
               A      M S GV+PD  +Y  L+ G     NM +A+ L  +M+ +G    V TY+V
Sbjct: 1035 LKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSV 1094

Query: 421  ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            ++ GF ++ +  ++  I  +M   GL  D+  +
Sbjct: 1095 LIKGFFKRKKFVEAREIFDQMRRDGLAADKEIF 1127



 Score =  311 bits (797), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 159/481 (33%), Positives = 281/481 (58%), Gaps = 1/481 (0%)

Query: 5    LCKD-HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            L KD +K  +A +   E  + GV  +  +YN +I+  C+ G + EA  L+  M  KG  P
Sbjct: 643  LSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTP 702

Query: 64   GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
             V +Y+++ING C+ G  D+  +++++M Q GL P++ TY +++   CR   ++EAEE F
Sbjct: 703  DVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAF 762

Query: 124  CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
             EM  +G+ PD + ++TL+  F + G +  A  +F EM S  + PD + YT II+G+C+ 
Sbjct: 763  SEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 822

Query: 184  GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
            G ++EA K+  EML +G   D++T+  ++NG C+A  + +A  + N M++ G  P+  T+
Sbjct: 823  GDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTY 882

Query: 244  TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            TTLI G CK+G+++ A  L   M +  ++P+I TYN++++G CK G +E+A KL  +  +
Sbjct: 883  TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 942

Query: 304  RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
              ++ + ++Y  L++ YC  G + +A  +  EM+GKG++PT+V+ N ++ G+C  G    
Sbjct: 943  AGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1002

Query: 364  ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
             ++ L+ M+++G+ P++ ++N L+  +    N+  A A+   M ++G+ PD  TY  ++ 
Sbjct: 1003 GEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVK 1062

Query: 424  GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            G C    M ++  +   M  KG +   STY+ LI G   +    EA    D+M + G   
Sbjct: 1063 GHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAA 1122

Query: 484  D 484
            D
Sbjct: 1123 D 1123



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 126/233 (54%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +VN LCK   I+ A   + E E  G+  DTVTY TL++AYC+ G +++A +++  M GKG
Sbjct: 920  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            L+P + T+N L+NG C  G  +  +++L+ ML  G++P+  T+N L+ + C + N+  A 
Sbjct: 980  LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAAT 1039

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             I+ +M  RGV PD  ++  L+        +  A   F+EMK  G       Y+++I G+
Sbjct: 1040 AIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +    +EA ++ D+M   G   D   ++   +   + K      D  +E++E
Sbjct: 1100 FKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  323 bits (827), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 168/486 (34%), Positives = 267/486 (54%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  K+  A   L EME  G +P++VT  TL++  C++G ++EA +L+ +M  KG
Sbjct: 39  LINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 98

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V  Y +LI+G C  G  DR KE+ DEML  G+S +  TY+ L+   CR     EA 
Sbjct: 99  FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEAN 158

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+  G+ PD+V+++ LI    ++G+   A+     M   G  P NV Y ++++G 
Sbjct: 159 TVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGL 218

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML--ERGVFP 238
           C+ G V++A K+   M+EKG   DVVTYNT++ GLC    + EA  LFN M   E  + P
Sbjct: 219 CKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEP 278

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           + +TF  LI G CK+G + KA+ +   M +K    ++VTYN L+ G  K G++++A +LW
Sbjct: 279 NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW 338

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             ++     PN  +Y ILI+G+C M  +  A  L+ EM   G+ P L   NT++   C+ 
Sbjct: 339 KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKE 398

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A     +M +   +PD IS+NT+I+G ++  +      L  KM   GL PD +T+
Sbjct: 399 GSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTF 458

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++    + G + +++  L RM+  G  PD   Y +L+ G  S+ +  E      +M  
Sbjct: 459 STLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAA 518

Query: 479 RGFVPD 484
           +G V D
Sbjct: 519 KGTVLD 524



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/453 (33%), Positives = 243/453 (53%), Gaps = 2/453 (0%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N ++   CR G + EA  L+  M  K + P + +YN+LINGLCK  +   A  +L EM  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            G  P++ T  TL+   C+   M EA E+   M ++G   D+V + TLI  F  NG LDR
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
               F EM   G+  + V Y+ +++G CR G   EA  + + M E G   DVVTY  +++
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLC+    T A DL N M+E+G  P   T+  L+ G CK+G +  A  +  +M +K  K 
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRK--ISPNYISYGILINGYCSMGHVTEAFR 331
           D+VTYNTL+ G C  G++++A KL+  M   +  + PN  ++ +LI G C  G +T+A +
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +  +MV KG    LV+ N ++ G  ++G   +A E   +++  G  P+S +Y+ LI+GF 
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   ++ A  L  +M   GL P +  YN ++   C++G +  ++ +   M      PD  
Sbjct: 362 KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDII 421

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++ T+I+G +   + +       +M++ G  PD
Sbjct: 422 SFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPD 454



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 234/430 (54%), Gaps = 2/430 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C +  +D  K    EM  KG+  + VTY+ L++  CR G  +EA  ++N+M+  G
Sbjct: 109 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 168

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY  LI+GLCK GR   A ++L+ M++ G  P   TYN LL   C++  + +A 
Sbjct: 169 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF 228

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYTIIIN 178
           +I   M  +G   D+V+++TL+      G++D AL  F  M      L P+   + ++I 
Sbjct: 229 KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 288

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C+ G + +A+K+  +M++KG   ++VTYN +L G  +A  + EA +L+ ++L+ G  P
Sbjct: 289 GLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVP 348

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           + +T++ LI G CK   +N A  LF  M    + P +  YNTL+   CK G +E+A  L+
Sbjct: 349 NSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLF 408

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M +    P+ IS+  +I+G    G       L  +MV  G++P  ++ +T+I    + 
Sbjct: 409 QEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKL 468

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  +A   L +MV+ G  PD++ Y++L+ G   + +  +   L+ +M  +G V D    
Sbjct: 469 GELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIV 528

Query: 419 NVILTGFCRQ 428
           + ILT  C  
Sbjct: 529 STILTCLCHS 538



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 205/389 (52%), Gaps = 2/389 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCKD +   A   L  M +KG  P  VTYN L++  C+EG + +AF+++  M  KG
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML--QMGLSPDTATYNTLLVESCRKENMSE 118
            K  V TYN+L+ GLC KG+ D A ++ + M   +  L P+  T+N L+   C++  +++
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A +I  +M ++G   ++V+++ L+G   + G++  A+  ++++   G VP++  Y+I+I+
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+   +  A  +  EM   G    +  YNT++  LC+   L +A  LF EM      P
Sbjct: 359 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 418

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  +F T+I G  K G+      L   M +  ++PD +T++TLI+   K+GE+++A    
Sbjct: 419 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 478

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M++   +P+ + Y  L+ G  S G  TE   L ++M  KG        +TI+   C S
Sbjct: 479 ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 538

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLI 387
                  E L        +  SIS N L+
Sbjct: 539 IQEVDVMELLPTFFQGTSEGASISCNELL 567



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 111/208 (53%)

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           N ++ G C+ G + +A  L  +M  + +SP+ +SY  LING C    + EA  L  EM  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G  P  V+C T++ G C+ G   +A E L  M  +G D D + Y TLI+GF    N+D+
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
              L  +M  +G+  +V+TY+ ++ G CR G+  ++  +L  M E G++PD  TYT LI+
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G         A    + M+++G  P + 
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNV 209



 Score = 38.1 bits (87), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 49/109 (44%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  ++D AK  L  M   G  PD + Y++L+     +G   E   L++ M+ KG
Sbjct: 461 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVE 109
                   ++++  LC   +     E+L    Q      + + N LL++
Sbjct: 521 TVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQ 569


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  323 bits (827), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 157/399 (39%), Positives = 248/399 (62%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK+ K+  AK F+  ME  GV P+ VTYNT+I+ YC  G +E A  +++ M  +G
Sbjct: 242 MINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRG 301

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  +TY SLI+G+CK G+ + A  +L++M ++GL P   TYNTL+   C K ++ +A 
Sbjct: 302 VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAF 361

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM RR + P + +++ LI      G++D A    ++M  +G+VPD++ Y I+INGY
Sbjct: 362 GYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGY 421

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G   +A  + DEM+ KG    +VTY +++  L +   +  ADDLF +++  G  PD 
Sbjct: 422 CRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDL 481

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  LI GHC +GN+++A  L   M +++I PD VTYNTL+ G C+ G++E+A +L  +
Sbjct: 482 IMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKE 541

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P++ISY  LI+GY   G + +AF +  EM+  G  PTL++ N +I+G C++  
Sbjct: 542 MKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQ 601

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
              A+E L +MVS+G+ PD  +Y +LI G  + ++  +A
Sbjct: 602 GDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 161/459 (35%), Positives = 261/459 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C+  + D A      M++KGV P   T+N +++ + +    E  + L   M    
Sbjct: 172 LIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLK 231

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+T+N +IN LCK+G+  +AK+ +  M  +G+ P+  TYNT++   C +  +  A 
Sbjct: 232 IKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGAR 291

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  RGV PD  ++ +LI    + G+L+ A     +MK  GL+P  V Y  +I+GY
Sbjct: 292 MVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGY 351

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +++A   RDEM+ +  +  V TYN +++ L     + EAD +  +M + G+ PD 
Sbjct: 352 CNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDS 411

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G+C+ GN  KA NL D M  K I+P +VTY +LI    K   M+ A+ L+  
Sbjct: 412 ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEK 471

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +I    SP+ I +  LI+G+C+ G++  AF L  EM  + I P  V+ NT+++G CR G 
Sbjct: 472 IIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGK 531

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L +M   G+ PD ISYNTLI+G+ +  +++ AF +  +M + G  P ++TYN 
Sbjct: 532 VEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNA 591

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++ G C+  +   +E +L  M+ KG+ PD STY +LI G
Sbjct: 592 LIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630



 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 145/418 (34%), Positives = 235/418 (56%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
             ++ LI   C+  R D A E  D M + G+ P   T+N +L    +         ++ E
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M R  +   + +F+ +I +  + G+L +A  +   M++ G+ P+ V Y  +I+GYC  G 
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V  A  + D M  +G   D  TY ++++G+C+   L EA  +  +M E G+ P   T+ T
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI G+C  G++ KA    D M +++I P + TYN LI      G+M++A+ +  DM    
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I P+ I+Y ILINGYC  G+  +AF L  EM+ KGI+PTLV+  ++I    +      AD
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +   K++ EG  PD I +N LI+G     N+D+AFAL+ +M+ + +VPD +TYN ++ G 
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           CR+G++ ++  +L  M  +G+ PD  +Y TLI+G+  + ++ +AF   DEML  GF P
Sbjct: 527 CREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNP 584



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 199/366 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   +++ A+M L  M+ +GV PD+ TY +LI+  C+ G LEEA  ++  M   G
Sbjct: 277 VIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIG 336

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TYN+LI+G C KG   +A    DEM++  + P  +TYN L+     +  M EA+
Sbjct: 337 LLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEAD 396

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G+ PD ++++ LI  + R G   +A     EM S G+ P  V YT +I   
Sbjct: 397 GMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVL 456

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   +  A  + ++++ +G   D++ +N +++G C    L  A  L  EM +R + PD 
Sbjct: 457 SKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDE 516

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TL+ G C++G + +A  L   M ++ I+PD ++YNTLI G+ K G++  A  +  +
Sbjct: 517 VTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDE 576

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S   +P  ++Y  LI G C       A  L  EMV KGI P   +  ++I+G  +  D
Sbjct: 577 MLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDD 636

Query: 361 ASKADE 366
           +S+A +
Sbjct: 637 SSEASD 642


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 171/499 (34%), Positives = 287/499 (57%), Gaps = 13/499 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           +++  CK +++  A +   E  ++ V P+  TYN ++N  C+     +A++++  M  GK
Sbjct: 13  IIDGFCKANQLKQA-LACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGK 71

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-GLSPDTATYNTLLVESCRKENMSE 118
            + P + TY+++ING CK+G  DRA E+L EM+   G++PD  TY +++   CR   M  
Sbjct: 72  SVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDR 131

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-MKSAGLVPDNVLYTIII 177
           A E+  EM  +GV PD  +FS LI  +    ++D AL  ++E + S+   PD V YT +I
Sbjct: 132 ACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALI 191

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G+C++G + +A+KM   M  + CV +VVTY+++L+GLC+A  L +A DLF  M  +G  
Sbjct: 192 DGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCV 251

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+TTLIHG C    ++ A  L D MT     PD V+YN L+DG+C++G +E+A +L
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQL 311

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM-VGKGIKPTLVSCNTIIKGYC 356
           + +M ++   P+ I+Y  L+ G+C+   + EA  L   M    GI P +V+ + ++ GY 
Sbjct: 312 FKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS 371

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           R+    +A EF+ +M++  V P++++Y++LI+G  +   +D A  ++  M N+ + P V 
Sbjct: 372 RAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVG 431

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           T+N ++   CR G M ++  +L  M   GL P   TYTTL+ G      ++ A+   + M
Sbjct: 432 TFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 491

Query: 477 --------LQRGFVPDDAF 487
                        VP+ AF
Sbjct: 492 RKKAKKSSSAANLVPEQAF 510



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 219/420 (52%), Gaps = 9/420 (2%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   C   K+D A K++   +      PD VTY  LI+ +C+ G LE+A +++  M G+
Sbjct: 154 LITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGR 213

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P V TY+SL++GLCK G  D+A ++   M   G  P+  TY TL+   C    +  A
Sbjct: 214 KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAA 273

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM+     PD VS++ L+  + R G+++ A   F+EM +   +PD + YT ++ G
Sbjct: 274 RLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRG 333

Query: 180 YCRNGFVLEALKMRDEM-LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           +C    + EA  + + M    G   DVVTY+ ++ G  RAK   EA +   EM+ R V P
Sbjct: 334 FCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 393

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  T+++LI G CK G ++ A+ +   M  K ++P + T+N++I   C++G+M++A KL 
Sbjct: 394 NAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 453

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM----VGKGIKPTLV---SCNTI 351
             M +  + P  ++Y  L+ G+   G +  A+ L+  M            LV   + + +
Sbjct: 454 VAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSAL 513

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I+G C++ +  KA   + ++ S   +P       +++G +R    ++A  L++ +   GL
Sbjct: 514 IRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 192/320 (60%), Gaps = 4/320 (1%)

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
           P  V +TIII+G+C+   + +AL   ++M E     +  TYN ++NGLC+A++ ++A ++
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 228 FNEMLE-RGVFPDFYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGF 285
             EM + + V PD  T++T+I+G CK G M++A  +  +++T+  I PD+VTY +++DG 
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV-GKGIKPT 344
           C+ G+M++A ++  +M  + + P+  ++  LI G+C+   V EA +L+ E++     KP 
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           +V+   +I G+C+SG+  KA + L  M      P+ ++Y++L++G  +  ++D+A  L  
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M ++G VP+V+TY  ++ G C   ++  + L++  M      PD  +Y  L++G+    
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
            ++EA +   EM  +  +PD
Sbjct: 304 RIEEAKQLFKEMATKSCLPD 323



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 165/290 (56%), Gaps = 10/290 (3%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C   VVT+  I++G C+A  L +A   F +M E  V P+  T+  +++G CK    +KA 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 261 NLFDIMTQ-KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISYGILIN 318
            +   M   KS+ PD+VTY+T+I+GFCK GEM++A ++  +M++R  I+P+ ++Y  +++
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK----MVSE 374
           G C  G +  A  +  EM  KG++P   + + +I G+C   +A K DE L      + S 
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC---NARKVDEALKLYKEILTSS 178

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
              PD ++Y  LI+GF +  N++KA  ++  ME +  VP+V+TY+ +L G C+ G +  +
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +  RM  KG  P+  TYTTLI+G  + + +  A    DEM      PD
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPD 288


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 168/486 (34%), Positives = 267/486 (54%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  K+  A   L EME  G +P++VT  TL++  C++G ++EA +L+ +M  KG
Sbjct: 185 LINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 244

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V  Y +LI+G C  G  DR KE+ DEML  G+S +  TY+ L+   CR     EA 
Sbjct: 245 FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEAN 304

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+  G+ PD+V+++ LI    ++G+   A+     M   G  P NV Y ++++G 
Sbjct: 305 TVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGL 364

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML--ERGVFP 238
           C+ G V++A K+   M+EKG   DVVTYNT++ GLC    + EA  LFN M   E  + P
Sbjct: 365 CKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEP 424

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           + +TF  LI G CK+G + KA+ +   M +K    ++VTYN L+ G  K G++++A +LW
Sbjct: 425 NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW 484

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             ++     PN  +Y ILI+G+C M  +  A  L+ EM   G+ P L   NT++   C+ 
Sbjct: 485 KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKE 544

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A     +M +   +PD IS+NT+I+G ++  +      L  KM   GL PD +T+
Sbjct: 545 GSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTF 604

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++    + G + +++  L RM+  G  PD   Y +L+ G  S+ +  E      +M  
Sbjct: 605 STLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAA 664

Query: 479 RGFVPD 484
           +G V D
Sbjct: 665 KGTVLD 670



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/486 (31%), Positives = 252/486 (51%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+AL +      A      M    V P   + + LI  +      +  F ++  +  +G
Sbjct: 80  LVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRG 139

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               VF  N ++ GLC+ G    A  ++ EM +  +SPD  +YNTL+   C+ + + EA 
Sbjct: 140 FTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAV 199

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM   G  P+ V+ +TL+    ++G++D A+     MK  G   D VLY  +I+G+
Sbjct: 200 GLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGF 259

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C NG +    ++ DEML KG   +VVTY+ +++GLCR     EA+ + N M E G+ PD 
Sbjct: 260 CNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDV 319

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI G CKDG    A++L ++M +K  +P  VTYN L+ G CK G +  A K+   
Sbjct: 320 VTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRM 379

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG--IKPTLVSCNTIIKGYCRS 358
           MI +    + ++Y  L+ G C  G V EA +L+  M      ++P + + N +I G C+ 
Sbjct: 380 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 439

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  +KA +   KMV +G   + ++YN L+ G ++   + +A  L  ++ + G VP+  TY
Sbjct: 440 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 499

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++++ GFC+   ++ ++ +   M   GLNP    Y TL+     + +L++A     EM  
Sbjct: 500 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 559

Query: 479 RGFVPD 484
               PD
Sbjct: 560 ANCEPD 565



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 234/430 (54%), Gaps = 2/430 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C +  +D  K    EM  KG+  + VTY+ L++  CR G  +EA  ++N+M+  G
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY  LI+GLCK GR   A ++L+ M++ G  P   TYN LL   C++  + +A 
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF 374

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYTIIIN 178
           +I   M  +G   D+V+++TL+      G++D AL  F  M      L P+   + ++I 
Sbjct: 375 KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 434

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C+ G + +A+K+  +M++KG   ++VTYN +L G  +A  + EA +L+ ++L+ G  P
Sbjct: 435 GLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVP 494

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           + +T++ LI G CK   +N A  LF  M    + P +  YNTL+   CK G +E+A  L+
Sbjct: 495 NSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLF 554

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M +    P+ IS+  +I+G    G       L  +MV  G++P  ++ +T+I    + 
Sbjct: 555 QEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKL 614

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  +A   L +MV+ G  PD++ Y++L+ G   + +  +   L+ +M  +G V D    
Sbjct: 615 GELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIV 674

Query: 419 NVILTGFCRQ 428
           + ILT  C  
Sbjct: 675 STILTCLCHS 684



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/413 (33%), Positives = 218/413 (52%), Gaps = 4/413 (0%)

Query: 72  INGLCKK--GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +  LC+K   +   A  +    L   L P  AT N L+    R  N   A  ++  M+  
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
            V P   S S LI  F+   +          +   G   +  +  I++ G CRNG V EA
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           + +  EM  K    D+V+YNT++NGLC+AK L EA  L  EM   G FP+  T TTL+ G
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CKDG M++A+ L + M +K    D+V Y TLI GFC  G +++  +L+ +M+ + IS N
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y  L++G C +G   EA  +   M   GI P +V+   +I G C+ G A+ A + L+
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            MV +G +P +++YN L++G  +E  +  AF ++  M  +G   DV+TYN ++ G C +G
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 403

Query: 430 RMHDSELILWRMI--EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ ++  +   M   E  L P+  T+  LI G   +  L +A + H +M+++G
Sbjct: 404 KVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG 456



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 243/460 (52%), Gaps = 2/460 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           + P   T N L++A  R      AF +   M+   + P   + ++LI       +     
Sbjct: 70  LLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGF 129

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            V+  +L+ G + +    N +L   CR   + EA  +  EM R+ V+PDIVS++TLI   
Sbjct: 130 GVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGL 189

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  +L  A+    EM++AG  P++V  T +++G C++G + EA+++ + M +KG   DV
Sbjct: 190 CKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADV 249

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V Y T+++G C    L    +LF+EML +G+  +  T++ L+HG C+ G   +A  + + 
Sbjct: 250 VLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNA 309

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +  I PD+VTY  LIDG CK G    A  L   M+ +   P+ ++Y +L++G C  G 
Sbjct: 310 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 369

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV--SEGVDPDSISY 383
           V +AF++   M+ KG K  +V+ NT++KG C  G   +A +  + M      ++P+  ++
Sbjct: 370 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 429

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N LI G  +E  + KA  +  KM  +G   +++TYN++L G  + G++ ++  +  ++++
Sbjct: 430 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 489

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            G  P+  TY+ LI+G      L  A     EM   G  P
Sbjct: 490 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP 529



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 205/389 (52%), Gaps = 2/389 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCKD +   A   L  M +KG  P  VTYN L++  C+EG + +AF+++  M  KG
Sbjct: 325 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML--QMGLSPDTATYNTLLVESCRKENMSE 118
            K  V TYN+L+ GLC KG+ D A ++ + M   +  L P+  T+N L+   C++  +++
Sbjct: 385 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 444

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A +I  +M ++G   ++V+++ L+G   + G++  A+  ++++   G VP++  Y+I+I+
Sbjct: 445 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 504

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+   +  A  +  EM   G    +  YNT++  LC+   L +A  LF EM      P
Sbjct: 505 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 564

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  +F T+I G  K G+      L   M +  ++PD +T++TLI+   K+GE+++A    
Sbjct: 565 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 624

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M++   +P+ + Y  L+ G  S G  TE   L ++M  KG        +TI+   C S
Sbjct: 625 ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 684

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLI 387
                  E L        +  SIS N L+
Sbjct: 685 IQEVDVMELLPTFFQGTSEGASISCNELL 713



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 145/299 (48%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EA+ +    L+   +    T N +++ L R++    A  ++  M    V P F + + LI
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
                         +  ++ ++    ++   N ++ G C+ G + +A  L  +M  + +S
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ +SY  LING C    + EA  L  EM   G  P  V+C T++ G C+ G   +A E 
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           L  M  +G D D + Y TLI+GF    N+D+   L  +M  +G+  +V+TY+ ++ G CR
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            G+  ++  +L  M E G++PD  TYT LI+G         A    + M+++G  P + 
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 355



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 49/109 (44%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  ++D AK  L  M   G  PD + Y++L+     +G   E   L++ M+ KG
Sbjct: 607 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVE 109
                   ++++  LC   +     E+L    Q      + + N LL++
Sbjct: 667 TVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQ 715


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  322 bits (825), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 157/390 (40%), Positives = 245/390 (62%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK+ K+  AK F+  ME  G+ P+ VTYNT+I+ YC  G +E A  + + M  +G
Sbjct: 197 MINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRG 256

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP  +TY S I+G+CK+G+ + A  +L++M ++GL P   TYNTL+   C K N+  A 
Sbjct: 257 VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAF 316

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   +M R G+ P + +++ LI     + ++D A    +EM   GLVPD+V Y I+INGY
Sbjct: 317 DYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGY 376

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V +A  + DEM+ KG     VTY +++  L +   + +ADDLF +++ +G+FPD 
Sbjct: 377 CRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDL 436

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  LI GHC +GNM++A  +   M Q  + PD VT+NTL+ G C+ G++E A +L  +
Sbjct: 437 IMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEE 496

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR I P++ISY  LI+GY   G + +AFR+  EM+  G  PTL++ N +I+G C++ +
Sbjct: 497 MKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEE 556

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF 390
              A++ L +M+S+G+ P+  +Y +LI G 
Sbjct: 557 GDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 162/459 (35%), Positives = 257/459 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C+  + D A      M+ KGV P     N +++ + +    E+A+ L   M    
Sbjct: 127 LIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMR 186

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V T+N +IN LCK+G+  +AKE +  M  +G+ P+  TYNT++   C +  +  A 
Sbjct: 187 IKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGAR 246

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  M  RGV PD  ++ + I    + G+L+ A     +MK  GL P  V Y  +I+GY
Sbjct: 247 MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A   RD+M+ +G +  V TYN +++ L     + EAD +  EM E+G+ PD 
Sbjct: 307 CNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDS 366

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G+C+ GN+ KA  L D M  K I+P  VTY +LI    K G M++A+ L+  
Sbjct: 367 VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEK 426

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + I P+ I +  LI+G+C+ G++  AF +  EM    + P  V+ NT+++G CR G 
Sbjct: 427 IVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGK 486

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E + +M S G+ PD ISYNTLI+G+ +  +M  AF +  +M + G  P ++TYN 
Sbjct: 487 VEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNA 546

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++ G C+      +E +L  MI KG+ P+ +TY +LI G
Sbjct: 547 LIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 147/424 (34%), Positives = 240/424 (56%), Gaps = 1/424 (0%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+K  V  Y+ LI   C+  R D A E  D M   G+ P     N +L    +     +A
Sbjct: 117 GIKTYVL-YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKA 175

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ EM R  +   +V+F+ +I +  + G+L +A  +   M++ G+ P+ V Y  II+G
Sbjct: 176 WVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHG 235

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC  G V  A  + D M  +G   D  TY + ++G+C+   L EA  +  +M E G+ P 
Sbjct: 236 YCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPT 295

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G+C  GN+  A +  D M ++ + P + TYN LI       +M++A+ +  
Sbjct: 296 AVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIK 355

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  + + P+ ++Y ILINGYC  G+V +AF L  EM+ KGI+PT V+  ++I    + G
Sbjct: 356 EMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRG 415

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +AD+   K+V +G+ PD I +N LI+G     NMD+AFA++ +M+   +VPD +T+N
Sbjct: 416 RMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFN 475

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G CR+G++  +  ++  M  +G+ PD  +Y TLI+G+  + ++K+AFR  DEML  
Sbjct: 476 TLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSI 535

Query: 480 GFVP 483
           GF P
Sbjct: 536 GFNP 539



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 150/455 (32%), Positives = 251/455 (55%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           V Y+ LI A C     ++AF+  + M GKG+ P V   N +++   K  R ++A  +  E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M +M +     T+N ++   C++  + +A+E    M   G+ P++V+++T+I  +   G+
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           ++ A M F  MK  G+ PD+  Y   I+G C+ G + EA  M ++M E G     VTYNT
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +++G C    L  A D  ++M+  G+ P   T+  LIH    D  M++A  +   M++K 
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           + PD VTYN LI+G+C+ G ++KA  L  +MIS+ I P  ++Y  LI      G + +A 
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L+ ++V KGI P L+  N +I G+C +G+  +A   L +M    V PD +++NTL+ G 
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGR 481

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            RE  ++ A  L+ +M+++G+ PD I+YN +++G+ ++G M D+  +   M+  G NP  
Sbjct: 482 CREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTL 541

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            TY  LI G         A +   EM+ +G  P+D
Sbjct: 542 LTYNALIQGLCKNEEGDHAEQLLKEMISKGITPND 576



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 165/322 (51%), Gaps = 35/322 (10%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ---------- 51
           ++ +CK+ K++ A   L +M++ G+ P  VTYNTLI+ YC +G LE AF           
Sbjct: 268 ISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGL 327

Query: 52  -------------------------LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE 86
                                    ++  MS KGL P   TYN LING C+ G   +A  
Sbjct: 328 MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFT 387

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           + DEM+  G+ P   TY +L+    ++  M +A+++F ++ R+G+ PD++ F+ LI    
Sbjct: 388 LHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHC 447

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
            NG +DRA    +EM    +VPD V +  ++ G CR G V  A ++ +EM  +G   D +
Sbjct: 448 ANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHI 507

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           +YNT+++G  +   + +A  + +EML  G  P   T+  LI G CK+   + A  L   M
Sbjct: 508 SYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEM 567

Query: 267 TQKSIKPDIVTYNTLIDGFCKV 288
             K I P+  TY +LI+G   V
Sbjct: 568 ISKGITPNDNTYLSLIEGIGNV 589



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 1/145 (0%)

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           GIK T V  + +I+  C       A E    M  +GV P   + N +++ F++    +KA
Sbjct: 117 GIK-TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKA 175

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           + L ++M    +   V+T+N+++   C++G++  ++  +  M   G+ P+  TY T+I+G
Sbjct: 176 WVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHG 235

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
           + S+  ++ A    D M  RG  PD
Sbjct: 236 YCSRGRVEGARMIFDLMKCRGVKPD 260


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  322 bits (825), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 162/465 (34%), Positives = 269/465 (57%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E++  GV  +  T   LI+  CR+  L++A   +    G+   P V ++N+L++G CK G
Sbjct: 225 EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMG 284

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D AK     M++ GL PD  +YN LL   C   +M EA E   +M   GV PDIV+++
Sbjct: 285 SVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYN 344

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            L   F   G +  A    + M   GL PD V YTI+I G+C+ G + E+ K++++ML +
Sbjct: 345 ILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQ 404

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  + +VTY  +L+ LC++  + EA  L +EM   G+ PD  T++ LIHG CK G + +A
Sbjct: 405 GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEA 464

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + L++ M  K I P+    + +I G  + G + +A   +  +    ++   I Y I+I+G
Sbjct: 465 IELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG 524

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y  +G++ EA R + +++ KGI PT+V+ N++I G+C+ G  ++A + L  +   G+ P 
Sbjct: 525 YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 584

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           S++Y TL+NG+  E +M   F ++ +ME + + P  ITY V++ G C++GR+H+S  +L 
Sbjct: 585 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M  +GL PD+ TY T+I      ++L++AF+ H++MLQ    P 
Sbjct: 645 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 689



 Score =  318 bits (816), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 157/481 (32%), Positives = 274/481 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +D AK F C M + G+ PD  +YN L++  C  G +EEA +  N M   G
Sbjct: 276 LMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHG 335

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TYN L NG    G    A +V+  ML  GL+PD  TY  L+   C+  N+ E+ 
Sbjct: 336 VEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF 395

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M  +G+   IV+++ L+    ++G++D A++   EM+  GL PD + Y+++I+G 
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGL 455

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA+++ +EM  K    +    + I++GL     ++EA   F+ + +  V  + 
Sbjct: 456 CKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 515

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  +I G+ K GN+ +A+  +  + +K I P IVT+N+LI GFCK G++ +A KL   
Sbjct: 516 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 575

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P  ++Y  L+NGYC  G +   F + +EM  K IKPT ++   ++KG C+ G 
Sbjct: 576 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGR 635

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             ++ + L  M + G+ PD I+YNT+I  F +  ++ KAF L ++M    L P  +TYNV
Sbjct: 636 LHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNV 695

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C  G + D++ +L  + ++ +   +  YTT+I  H ++ +++ A  F  +M++RG
Sbjct: 696 LINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG 755

Query: 481 F 481
           F
Sbjct: 756 F 756



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 249/473 (52%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           I  A   +  M   G+ PD VTY  LI  +C+ G +EE+F+L   M  +GLK  + TY  
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++ LCK GR D A  +L EM  +GL PD  TY+ L+   C++  + EA E++ EM  + 
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + P+    S +I      G +  A MYF  +  + +  + +LY I+I+GY + G + EA+
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           +   +++EKG    +VT+N+++ G C+   L EA  L + +   G+ P   T+TTL++G+
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C++G+M+   ++   M  K+IKP  +TY  ++ G CK G + ++ +L   M +R + P+ 
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           I+Y  +I  +C    + +AF+L  +M+   ++P+ V+ N +I G C  G+   AD  L  
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 715

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           +  + +    ++Y T+I     + ++  A     +M  +G    +  Y+ ++   C++  
Sbjct: 716 LQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNL 775

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           + D++     M+  G+ PD+     ++N      +    F     M++ G +P
Sbjct: 776 ITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 222/413 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCK  +ID A + L EME  G+ PD +TY+ LI+  C+ G +EEA +L   M  K 
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  F  +++I+GL +KG    A+   D + +  ++ +   YN ++    +  N+ EA 
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + ++  +G++P IV+F++LI  F + G+L  A+     +K  GLVP +V YT ++NGY
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +     M  EM  K      +TY  ++ GLC+   L E+  L   M  RG+FPD 
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I   CK  ++ KA  L + M Q S++P  VTYN LI+G C  G ++ A++L   
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 715

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + I    ++Y  +I  +C+ G V  A   +++MV +G + ++   + +I   C+   
Sbjct: 716 LQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNL 775

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
            + A  F   M++ G+ PD      ++N F R  + +  F + + M   GL+P
Sbjct: 776 ITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  322 bits (825), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 171/483 (35%), Positives = 275/483 (56%), Gaps = 9/483 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK  +++ A +FL +M  KG +PD  TY  +I+A C E  L EA + +  M+ + 
Sbjct: 17  LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY  LI+GLCK GR D A  +L +M +  + P   TYN+L+   C+ E  SEA 
Sbjct: 77  LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAY 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G  PDI +++TLI  F ++ + D AL  F ++ + G  PD V Y+ +I+G 
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195

Query: 181 CRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G + EA+ +   M++ G C+ + VTYN++++G CR   + EA +L   M E G  PD
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTL++G CK   ++ A +L + MT+K + PD+VT+ +L+DG C+   +  A  +  
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILG 315

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  +  SP   +Y  +++GYC    + EA +   E +     P +VS N +I+G C+  
Sbjct: 316 EMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVN 373

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM-ENQGLVPDVITY 418
            +S+A E + +      +PD + Y T+I+G  RE+ +D+A  +  KM E  G +P+ ITY
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++TG C  G +  +       IEKG  P+  TY  LI+     N  ++A    D+M+Q
Sbjct: 434 STLITGLCNAGMLDRAR----GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489

Query: 479 RGF 481
           RGF
Sbjct: 490 RGF 492



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 229/423 (54%), Gaps = 36/423 (8%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           S D  TY +L+   C+ + + +A     +M  +G  PD+ +++ +I       +L  A  
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           +  EM +  L P+ V YT++I+G C+ G V EA+ +  +M +K CV   VTYN++++GLC
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
           +A+  +EA DL  EM+  G  PD +T+TTLI G CK    + AL +F+ +  +  +PD+V
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMI-SRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           TY+ LIDG CK G +++A  L+  MI S    PN ++Y  LI+G+C MG + EA  L   
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M   G  P +V+  T++ G+C+      A + L++M  +G+ PD +++ +L++G  RE  
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE------------LILWRMIE 443
           +  A  ++ +M  +   P V TYN IL G+CR  ++ ++             ++ + ++ 
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMI 366

Query: 444 KGL---------------------NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR-GF 481
           +GL                     NPD   YTT+I+G   +  + EA R + +ML+  G 
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426

Query: 482 VPD 484
           +P+
Sbjct: 427 LPN 429



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 166/285 (58%), Gaps = 2/285 (0%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  D VTY +++ GLC+ K L +A     +M+ +G  PD YT+T +IH  C +  +++A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
              + M  +++ P++VTY  LIDG CK G +++A  L + M  +K  P  ++Y  LI+G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGL 125

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C     +EA+ L  EMV  G  P + +  T+I G+C+S  +  A     ++V+ G  PD 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQG-LVPDVITYNVILTGFCRQGRMHDSELILW 439
           ++Y+ LI+G  +E  + +A  L  +M   G  +P+ +TYN +++GFCR G+M ++  +L 
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           RM E G +PD  TYTTL+NG      L +A+   ++M ++G  PD
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%)

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           ++   S   D VTY +LI G CKV  +E+A      M+S+   P+  +Y  +I+  C   
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA +   EM  + + P +V+   +I G C+ G   +A   LSKM  + V P +++YN
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           +LI+G  + E   +A+ L+ +M   G +PD+ TY  ++TGFC+  +  D+  +  +++ +
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           G  PD  TY+ LI+G   +  LKEA      M++ G
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  322 bits (824), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 171/483 (35%), Positives = 275/483 (56%), Gaps = 9/483 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK  +++ A +FL +M  KG +PD  TY  +I+A C E  L EA + +  M+ + 
Sbjct: 17  LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY  LI+GLCK GR D A  +L +M +  + P   TYN+L+   C+ E  SEA 
Sbjct: 77  LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAY 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G  PDI +++TLI  F ++ + D AL  F ++ + G  PD V Y+ +I+G 
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195

Query: 181 CRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G + EA+ +   M++ G C+ + VTYN++++G CR   + EA +L   M E G  PD
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTL++G CK   ++ A +L + MT+K + PD+VT+ +L+DG C+   +  A  +  
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILG 315

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  +  SP   +Y  +++GYC    + EA +   E +     P +VS N +I+G C+  
Sbjct: 316 EMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVN 373

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM-ENQGLVPDVITY 418
            +S+A E + +      +PD + Y T+I+G  RE+ +D+A  +  KM E  G +P+ ITY
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++TG C  G +  +       IEKG  P+  TY  LI+     N  ++A    D+M+Q
Sbjct: 434 STLVTGLCNAGMLDRAR----GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489

Query: 479 RGF 481
           RGF
Sbjct: 490 RGF 492



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 228/423 (53%), Gaps = 36/423 (8%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           S D  TY +L+   C+ + + +A     +M  +G  PD+ +++ +I       +L  A  
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           +  EM +  L P+ V YT++I+G C+ G V EA+ +  +M  K CV   VTYN++++GLC
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLC 126

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
           +A+  +EA DL  EM+  G  PD +T+TTLI G CK    + AL +F+ +  +  +PD+V
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMI-SRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           TY+ LIDG CK G +++A  L+  MI S    PN ++Y  LI+G+C MG + EA  L   
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M   G  P +V+  T++ G+C+      A + L++M  +G+ PD +++ +L++G  RE  
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE------------LILWRMIE 443
           +  A  ++ +M  +   P V TYN IL G+CR  ++ ++             ++ + ++ 
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMI 366

Query: 444 KGL---------------------NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR-GF 481
           +GL                     NPD   YTT+I+G   +  + EA R + +ML+  G 
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426

Query: 482 VPD 484
           +P+
Sbjct: 427 LPN 429



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 166/285 (58%), Gaps = 2/285 (0%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  D VTY +++ GLC+ K L +A     +M+ +G  PD YT+T +IH  C +  +++A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
              + M  +++ P++VTY  LIDG CK G +++A  L + M  +K  P  ++Y  LI+G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGL 125

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C     +EA+ L  EMV  G  P + +  T+I G+C+S  +  A     ++V+ G  PD 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQG-LVPDVITYNVILTGFCRQGRMHDSELILW 439
           ++Y+ LI+G  +E  + +A  L  +M   G  +P+ +TYN +++GFCR G+M ++  +L 
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           RM E G +PD  TYTTL+NG      L +A+   ++M ++G  PD
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%)

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           ++   S   D VTY +LI G CKV  +E+A      M+S+   P+  +Y  +I+  C   
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA +   EM  + + P +V+   +I G C+ G   +A   LSKM  + V P +++YN
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           +LI+G  + E   +A+ L+ +M   G +PD+ TY  ++TGFC+  +  D+  +  +++ +
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           G  PD  TY+ LI+G   +  LKEA      M++ G
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  322 bits (824), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 165/486 (33%), Positives = 274/486 (56%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ +++ A   L EME     P++ TY  L++  C+EG +EEA +L+  M  KG
Sbjct: 16  IINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  V  Y++LI+G C KG  DR K + DEML+ G+SP+   Y+ L+   C+K    EA 
Sbjct: 76  LEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREAT 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+ RG+ PD+ +++ +IG   ++G+  +AL  F  M   G  P  V Y ++ING 
Sbjct: 136 AVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGL 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG--VFP 238
           C+ G + +A K+ + MLEKG  ++VV+YNT++ GLC    L EA  LF+ +LE G  V P
Sbjct: 196 CKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEP 255

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  TF T+I G CK+G ++KA+ ++D M ++    ++ T + LI  + K G ++KA +LW
Sbjct: 256 DVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELW 315

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             +    + P+  +Y ++I+G+C M  +  A  L+  M   G+ PTL   NT++   C+ 
Sbjct: 316 KRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKE 375

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               +A     +M     +PD+IS+N +I+G ++  ++  A  L++ M+  GL PD  TY
Sbjct: 376 SSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTY 435

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           +  +    + G+M +++     MI  G+ PD   Y +LI G    + ++E      +M  
Sbjct: 436 SSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMAD 495

Query: 479 RGFVPD 484
            G + D
Sbjct: 496 MGVILD 501



 Score =  300 bits (769), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 158/467 (33%), Positives = 258/467 (55%), Gaps = 2/467 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M++  + PD V+YNT+IN  C+E  LE+A  L+  M G   +P  FTY  L++GLCK+GR
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A  +L EM + GL  D   Y+TL+   C K  +   + +F EM  +G++P++V +S 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI  F + G    A      M   G+ PD   YT +I G C++G   +AL + D M EKG
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
                VTYN ++NGLC+   + +A  +F  MLE+G   +  ++ TLI G C +G +++A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 261 NLFDIMTQKS--IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
            LF  + +    ++PD++T+NT+I G CK G ++KA +++  MI R    N  +  ILI 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            Y   G + +A  LW  +   G+ P+  + + +I G+C+    + A    S+M   G+ P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
               YNTL+    +E ++++A  L  +M+     PD I++N+++ G  + G +H ++ +L
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M + GL PD  TY++ IN       ++EA    D M+  G  PD+
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDN 467



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 204/389 (52%), Gaps = 2/389 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCKD +   A      M +KG  P TVTYN LIN  C+EG + +AF++  +M  KG
Sbjct: 156 MIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKG 215

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG--LSPDTATYNTLLVESCRKENMSE 118
            +  V +YN+LI GLC  G+ D A ++   +L+ G  + PD  T+NT++   C++  + +
Sbjct: 216 KRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDK 275

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A EI+  M  RG   ++ +   LIG + ++G +D+A+  ++ +   GLVP +  Y+++I+
Sbjct: 276 AVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMID 335

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+   +  A  +   M   G    +  YNT++  LC+   L +A  LF EM E    P
Sbjct: 336 GFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEP 395

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  +F  +I G  K G+++ A  L + M Q  + PD  TY++ I+   K+G+ME+A   +
Sbjct: 396 DTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAF 455

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             MI+  I+P+   Y  LI G+     + E   L  +M   G+   L   N+I+   C S
Sbjct: 456 DSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNS 515

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLI 387
            +     E L    SE     SIS + L+
Sbjct: 516 AEHLHVMELLPNFSSESSGGTSISCDKLL 544


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  321 bits (822), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 157/458 (34%), Positives = 269/458 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+ + +D A   L +M + G++P   T+N LIN  C EG ++EA +L N M  +G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V +YN++INGLCK G    A +V  +M Q G  PD  TYNT++   C+   +++A 
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   EM  RG+ P++ +++ ++  F   GQL+ A   F+EM    ++PD V  TI+++G 
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  + + M EKG   ++ TYN +++G C  +++ EA  +F  M+ +G  P  
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  LI+G CK   M++A +L   M  K++ PD VTY+TL+ G C+ G  ++A  ++ +
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  + PN ++Y IL++G+C  GH+ EA +L   M  K ++P +V    +I+G   +G 
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGK 488

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E  SK+ ++G+ P   +Y  +I G ++E   D+A+ L  KME+ G +P+  +YNV
Sbjct: 489 LEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 548

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++ GF +      +  ++  M+ K  + + ST+  L++
Sbjct: 549 MIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 151/474 (31%), Positives = 262/474 (55%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID A      M +    P    +   + ++ ++        L N M   G+   V++ N 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LIN LC+    D A  +L +M ++G+ P  +T+N L+   C +  + EA E+F EM RRG
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P+++S++T+I    + G    A+  F++M+  G  PD V Y  II+  C++  V +A+
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           +   EML++G   +V TYN +++G C    L EA  LF EM+ R V PD  T T L+ G 
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+G +++A  +F+ MT+K ++P+I TYN L+DG+C    M +A K++  MI +  +P  
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            SY ILING+C    + EA  L  EM  K + P  V+ +T+++G C+ G   +A     +
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M S G+ P+ ++Y+ L++GF +  ++D+A  L+  M+ + L P+++ + +++ G    G+
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGK 488

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  ++ +  ++   G+ P   TYT +I G + +    EA+    +M   GF+P+
Sbjct: 489 LEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 542



 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 261/465 (56%), Gaps = 1/465 (0%)

Query: 18  LC-EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           LC +M+  GV  +  + N LIN  CR   ++ A  ++  M   G+ P   T+N+LINGLC
Sbjct: 110 LCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLC 169

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
            +G+   A E+ +EM++ G  P+  +YNT++   C+  N S A ++F +M + G  PD+V
Sbjct: 170 NEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVV 229

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++T+I    ++  ++ A+ +  EM   G+ P+   Y  +++G+C  G + EA ++  EM
Sbjct: 230 TYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEM 289

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           + +  + D VT   +++GLC+  M++EA  +F  M E+GV P+  T+  L+ G+C    M
Sbjct: 290 VGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLM 349

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           N+A  +F+IM ++   P + +YN LI+GFCK   M++A  L A+M  + ++P+ ++Y  L
Sbjct: 350 NEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 409

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + G C  G   EA  ++ EM   G+ P LV+ + ++ G+C+ G   +A + L  M  + +
Sbjct: 410 MQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
           +P+ + +  LI G      ++ A  L SK+   G+ P + TY V++ G  ++G   ++  
Sbjct: 470 EPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYD 529

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +  +M + G  P+  +Y  +I G +   +   A R  DEM+ + F
Sbjct: 530 LFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRF 574



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 202/370 (54%)

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           ++ +A   F  M R    P +  F   +G F++  Q    +    +M   G+  +     
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++IN  CR   V  A+ +  +M + G      T+N ++NGLC    + EA +LFNEM+ R
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P+  ++ T+I+G CK GN + A+++F  M Q   KPD+VTYNT+ID  CK   +  A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +  ++M+ R I PN  +Y  +++G+C +G + EA RL+ EMVG+ + P  V+   ++ G
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+ G  S+A      M  +GV+P+  +YN L++G+  +  M++A  +   M  QG  P 
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG 367

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V +YN+++ GFC+  RM +++ +L  M  K LNPD  TY+TL+ G       KEA     
Sbjct: 368 VHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFK 427

Query: 475 EMLQRGFVPD 484
           EM   G +P+
Sbjct: 428 EMCSYGLLPN 437



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 127/253 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C    ++ AK     M ++G  P   +YN LIN +C+   ++EA  L+  M  K 
Sbjct: 339 LMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TY++L+ GLC+ GR   A  +  EM   GL P+  TY+ LL   C+  ++ EA 
Sbjct: 399 LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEAL 458

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M  + + P+IV  + LI      G+L+ A   F ++ + G+ P    YT++I G 
Sbjct: 459 KLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGL 518

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA  +  +M + G + +  +YN ++ G  + +  + A  L +EM+ +    + 
Sbjct: 519 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANL 578

Query: 241 YTFTTLIHGHCKD 253
            TF  L+    +D
Sbjct: 579 STFQMLLDLESQD 591



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 51/109 (46%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K++ AK    ++   G+ P   TY  +I    +EG  +EA+ L   M   G  P   +YN
Sbjct: 488 KLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYN 547

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            +I G  +      A  ++DEM+    S + +T+  LL    + E +S+
Sbjct: 548 VMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQDEIISQ 596


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  321 bits (822), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 159/458 (34%), Positives = 261/458 (56%), Gaps = 1/458 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  T+  ++ ++C++G L + ++L   M   G+ P    YN LI+G  KKGR D A  +
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            +EM+ +GL P   TYN+LL   C++  M EA E+F  M+ +G  PD+V++ST+I    +
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 148 NGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
            G++  AL M F +M   G   + V Y  +ING C++  +  A K+ +EM  KG V D +
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TYNTIL+GLCR   ++EA   F+ M  RG  PD   +  L+    K+G  ++A+ LF  +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             K   PD VTYN+++ G  +   M++A +++  M++   +PN  +Y I+++G+C    V
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A ++  EM   G  P +V+ N ++ G C++    KA E  S MV  G  PD +SY+ +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           +NG  +   +  A  L  +M  + LVPDV+T+N+++ G C+ G++ +++ +L +M   G 
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGC 425

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            PD   Y TL+NG   Q    +A R    M ++GF+ D
Sbjct: 426 APDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 141/450 (31%), Positives = 243/450 (54%), Gaps = 1/450 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ + CK  K+        +M   G+ PD + YN LI+ Y ++G ++EA +L   M   G
Sbjct: 14  VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG 73

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA- 119
           L+P ++TYNSL+N  CK+ +   A E+   M + G  PD  TY+T++   C+   ++EA 
Sbjct: 74  LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEAL 133

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E +F +M  RG + + V+++ LI    ++  ++RA     EM S G VPDN+ Y  I++G
Sbjct: 134 EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSG 193

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR G V EA +  D M  +G   DVV YN +L+ L +     EA  LF +++ +G  PD
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPD 253

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ +++ G  +  NM++A  +F  M      P+  TY+ ++ G C+  +++ A+K+  
Sbjct: 254 TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M      P+ ++Y IL++G C    V +A  L+  MV  G  P +VS + ++ G C++ 
Sbjct: 314 EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN 373

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A     +M+   + PD +++N L++G  +   +D+A  L+ +M   G  PD + YN
Sbjct: 374 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYN 433

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPD 449
            ++ G  +QGR   ++ +   M EKG   D
Sbjct: 434 TLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 227/389 (58%), Gaps = 1/389 (0%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           SP+  T+  +L   C++  + +  ++F +M   G++PD + ++ LI  +++ G++D A  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
            + EM S GL P    Y  ++N +C+   + EA+++   M EKG   DVVTY+TI++GLC
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 217 RAKMLTEA-DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
           +   +TEA + LF++M+ERG   +   +  LI+G CKD N+ +A  L + M  K   PD 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           +TYNT++ G C++G++ +A + +  M SR  SP+ ++Y  L++     G   EA +L+ +
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           ++ KG  P  V+ N+I+ G  R  +  +A+E   KMV+ G  P+  +Y+ +++G  R + 
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK 304

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +D A  ++ +M   G VPDV+TYN++L G C+   +  +  +   M++ G  PD  +Y+ 
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++NG    N + +A    D M++R  VPD
Sbjct: 365 VLNGLCKTNKVHDARVLFDRMIERKLVPD 393



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 199/357 (55%), Gaps = 1/357 (0%)

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           R  +P+  +F  ++  F + G+L      F +M   G+ PD + Y I+I+GY + G V E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A ++ +EM+  G    + TYN++LN  C+   + EA +LF  M E+G  PD  T++T+I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 249 GHCKDGNMNKALN-LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           G CK G + +AL  LF  M ++    + V YN LI+G CK   +E+A KL  +M S+   
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ I+Y  +++G C MG V+EA + +  M  +G  P +V+ N ++    + G   +A + 
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
              ++++G  PD+++YN+++ G  R+ NMD+A  +  KM   G  P+  TY+++L+G CR
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++ D+  +L  M + G  PD  TY  L++G    N + +A      M+  G  PD
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 160/287 (55%), Gaps = 1/287 (0%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  +  T+  +L   C+   L +   LF +ML+ G+ PD   +  LI G+ K G +++A 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L++ M    ++P I TYN+L++ FCK  +M++A +L+  M  +   P+ ++Y  +I+G 
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 321 CSMGHVTEAFR-LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           C  G VTEA   L+++M+ +G     V+ N +I G C+  +  +A + L +M S+G  PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +I+YNT+++G  R   + +A      M ++G  PDV+ YN +L    ++G+  ++  +  
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            +I KG  PD  TY +++ G   ++N+ EA     +M+  G  P+ A
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 134/241 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL K+ K D A     ++  KG  PDTVTYN+++    R+  ++EA ++   M   G
Sbjct: 225 LLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY+ +++G C+  + D A +VL+EM ++G  PD  TYN LL   C+   + +A 
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 344

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M   G APDIVS+S ++    +  ++  A + F  M    LVPD V + I+++G 
Sbjct: 345 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + D+M   GC  D V YNT++NGL +     +AD L   M E+G   D 
Sbjct: 405 CKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 464

Query: 241 Y 241
           +
Sbjct: 465 F 465



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 111/183 (60%), Gaps = 1/183 (0%)

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R+ SPN  ++ +++  +C  G + + ++L+ +M+  GI P  +  N +I GY + G   +
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A+    +MVS G++P   +YN+L+N F +E  M +A  L   M  +G  PDV+TY+ I++
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 424 GFCRQGRMHDS-ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           G C+ G++ ++ E++  +MIE+G + +   Y  LING     N++ A++  +EM  +G+V
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 483 PDD 485
           PD+
Sbjct: 182 PDN 184


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  321 bits (822), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 163/465 (35%), Positives = 270/465 (58%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G+ P  VTYNTL+++YC+ G +++   L++ M  +G  P   TYN LINGL KKG 
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            ++AK ++ EML+ GL     TYN L+     K  ++EA  +  EM  +G +P + ++++
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I    + G++  A+    +M +  L+PD V Y  +I GYCR G +++A  + DE+    
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
               +VTYNT+L+GLCR   L  A  L  EM+  G+ PD  T+T L++G CK G+++ A 
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQ 464

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             FD M  + ++ D   Y T I G  K+G+  +A  L  +M+++   P+ I Y ++++G 
Sbjct: 465 EFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +G++ EA  L  +MV  G+ P  V+  +II  +  +G   K  E   +M+S+G+ P  
Sbjct: 525 CKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSV 584

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++Y  LI+G   +  +++AF   S+M+ +G++P+VITYN ++ G C+  RM  +      
Sbjct: 585 VTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAE 644

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           M+EKG+ P++ +YT LIN + +  N +EA   + +ML RG  PD 
Sbjct: 645 MVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689



 Score =  311 bits (797), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 153/457 (33%), Positives = 267/457 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++ CK  K+      L EM+++G  P+ VTYN LIN   ++G  E+A  L+  M   G
Sbjct: 240 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK   +TYN LI G   KG    A  + +EM+  G SP  ATYN+ +   C+   MS+A 
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 359

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   +M    + PD+VS++TLI  + R G L +A + F E++S  L P  V Y  +++G 
Sbjct: 360 QQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGL 419

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A +++ EM+ +G   D+VTY  ++NG C+   L+ A + F+EML  G+  D 
Sbjct: 420 CRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDS 479

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y + T I G  K G+ ++A +L + M  K   PD++ YN ++DG CK+G +E+A++L   
Sbjct: 480 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 539

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+Y++Y  +I+ +   G + +   ++YEM+ KG+ P++V+   +I G+   G 
Sbjct: 540 MVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGR 599

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A  + S+M  +G+ P+ I+YN+LING  +   MD+A+   ++M  +G+ P+  +Y +
Sbjct: 600 LERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTI 659

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           ++   C  G   ++  +  +M+++G+ PD  T++ L+
Sbjct: 660 LINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696



 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 157/449 (34%), Positives = 253/449 (56%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           LI  Y ++  +E+   + + M    L P V   N ++  L  K    +A EV   M + G
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           + P   TYNTLL   C+   + +  ++  EM RRG AP+ V+++ LI   S+ G+ ++A 
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
               EM   GL      Y  +I GY   G + EAL +++EM+ KG    V TYN+ + GL
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
           C+   +++A    ++ML   + PD  ++ TLI+G+C+ GN+ KA  LFD +    + P I
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 409

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           VTYNTL+DG C+ GE+E A +L  +MI+  I+P+ ++Y IL+NG C MG ++ A   + E
Sbjct: 410 VTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 469

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M+ +G++    +  T I G  + GD S+A     +M+++G  PD I YN +++G  +  N
Sbjct: 470 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN 529

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +++A  L+ KM + G++PD +TY  I+      GR+     I + M+ KGL P   TYT 
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           LI+GH  +  L+ AF +  EM ++G +P+
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPN 618



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 150/444 (33%), Positives = 229/444 (51%), Gaps = 35/444 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  + + AK  + EM + G+     TYN LI  Y  +G L EA  L   M  KG
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYNS I GLCK GR   A + L +ML   L PD  +YNTL+   CR  N+ +A 
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E+    + P IV+++TL+    R G+L+ A     EM + G+ PD V YTI++NG 
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 181 CRNGFV--------------LE---------------------ALKMRDEMLEKGCVMDV 205
           C+ G +              LE                     A  +++EML KG   D+
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           + YN +++GLC+   L EA +L  +M+  GV PD+ T+T++IH H ++G + K   +F  
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K + P +VTY  LI G    G +E+A   +++M  + I PN I+Y  LING C +  
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +A+  + EMV KGI P   S   +I   C  G+  +A     +M+  GV PDS +++ 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 386 LINGFVREENMDKAFALVSKMENQ 409
           L+    ++  +     L S ++++
Sbjct: 695 LLKQLGKDCKLQAVRQLESLLDSE 718



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/311 (36%), Positives = 172/311 (55%)

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I  Y +   V + L + D+M++     DV   N IL  L    ++++A +++  M E 
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G+ P   T+ TL+  +CK G + + L+L   M ++   P+ VTYN LI+G  K GE E+A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L  +M+   +  +  +Y  LI GY + G + EA  L  EMV KG  PT+ + N+ I G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+ G  S A + LS M++  + PD +SYNTLI G+ R  N+ KAF L  ++ +  L P 
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           ++TYN +L G CRQG +  ++ +   MI +G+ PD  TYT L+NG     +L  A  F D
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468

Query: 475 EMLQRGFVPDD 485
           EML  G   D 
Sbjct: 469 EMLHEGLELDS 479


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  320 bits (821), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 162/488 (33%), Positives = 278/488 (56%), Gaps = 2/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG-VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++ LC   K+DSA     EME+ G   PD  TY+T++++  + G +++A +L+ +M  K
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P V TY+SL++GLCK G+ D A  +L  M + G SP+  TYNT++   C+   + EA
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM   G  P++V+++ L+  F + G+ + A+     M   G VP+   Y  +++ 
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   V  A ++   M++KGCV +VV+YNT++ GLC+A  + E   L  +ML     PD
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 429

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF T+I   CK   ++ A  LF+++ +    P++VTYN+L+ G CK    ++A  L  
Sbjct: 430 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 489

Query: 300 DMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           +M  ++  SP+ I+Y  +I+G C    V  A++L+ +M+  G+ P  V+ + +I   C+ 
Sbjct: 490 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 549

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               +A+  L  M+  G DP +I+Y TLI+GF +  N+DKA  ++  + ++G  PDV+T+
Sbjct: 550 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 609

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++ +    ++GR+  +  +L  M+  GL PD  TY TL+ G    +  ++A    + M Q
Sbjct: 610 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQ 669

Query: 479 RGFVPDDA 486
            G  PD+A
Sbjct: 670 CGCEPDNA 677



 Score =  316 bits (810), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/483 (33%), Positives = 272/483 (56%), Gaps = 2/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V++L K  K+D A   +  M  KG  P+ VTY++L++  C+ G L+EA  L+  M+  G
Sbjct: 226 IVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 285

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN++I+G CK GR D A  +L+EM+  G  P+  TY  LL   C+     +A 
Sbjct: 286 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAI 345

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G  P++ ++++L+ +F +  +++RA      M   G VP+ V Y  +I G 
Sbjct: 346 GLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGL 405

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V E + + ++ML   CV D+VT+NTI++ +C+   +  A +LFN + E G  P+ 
Sbjct: 406 CKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNL 465

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKS-IKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            T+ +L+HG CK    ++A  L   MT+K    PDI+TYNT+IDG CK   +++A KL+ 
Sbjct: 466 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 525

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+S  ++P+ ++Y I+I+  C    + EA  +   M+  G  P  ++  T+I G+C++G
Sbjct: 526 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 585

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  KA E L  ++S+G  PD ++++  I+   +   + +A  L+  M   GLVPD +TYN
Sbjct: 586 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYN 645

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF-RFHDEMLQ 478
            +L GFC   R  D+  +   M + G  PD +TYTTL+   V + + K+        M+ 
Sbjct: 646 TLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVD 705

Query: 479 RGF 481
            GF
Sbjct: 706 TGF 708



 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 166/523 (31%), Positives = 277/523 (52%), Gaps = 38/523 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +   A +   EM  K   PD+VTYNT+IN   +   L++A +L+  M   G
Sbjct: 16  ILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VF+YN++++G CK  R + A  +L++M+  G  PD  +Y T++   C+ + + EA 
Sbjct: 75  FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNG------------------------------- 149
            +  +M +RG  P+++++ TL+  F R G                               
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194

Query: 150 ----QLDRALMYFREMKSAGLVPDNVL-YTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
               +LD AL  F+EM+ +G  P +V  Y+ I++   ++G V +A ++ + M+ KGC  +
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN 254

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VVTY+++L+GLC+A  L EA  L   M   G  P+  T+ T+I GHCK G +++A +L +
Sbjct: 255 VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 314

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M     +P++VTY  L+D FCK G+ E A  L   M+ +   PN  +Y  L++ +C   
Sbjct: 315 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 374

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V  A +L   M+ KG  P +VS NT+I G C++    +    L +M+S    PD +++N
Sbjct: 375 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           T+I+   +   +D A+ L + ++  G  P+++TYN ++ G C+  R   +E +L  M  K
Sbjct: 435 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494

Query: 445 -GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            G +PD  TY T+I+G      +  A++   +ML  G  PDD 
Sbjct: 495 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 537



 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 237/430 (55%), Gaps = 2/430 (0%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M+ KGLK     + S++ GLC  G+C  A     EM +    PD+ TYNT++    + + 
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + +A  +  EM   G AP++ S++T++  F +  +++ AL    +M   G  PD V YT 
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +ING C+   V EA ++ D+M+++GC  +V+TY T+++G CR   L  A +L  +M ERG
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK-SIKPDIVTYNTLIDGFCKVGEMEKA 294
             P+  T+  ++HG C    ++ AL LF  M +  S  PD+ TY+T++D   K G+++ A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L   M+S+  SPN ++Y  L++G C  G + EA  L   M   G  P +V+ NTII G
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           +C+ G   +A   L +MV  G  P+ ++Y  L++ F +    + A  LV  M  +G VP+
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           + TYN +L  FC++  +  +  +L  MI+KG  P+  +Y T+I G      + E     +
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 419

Query: 475 EMLQRGFVPD 484
           +ML    VPD
Sbjct: 420 QMLSNNCVPD 429



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 118/222 (53%), Gaps = 1/222 (0%)

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +K +K     + +++ G C  G+   A   + +M S+   P+ ++Y  +ING      
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +A RL  EMV  G  P + S NT++ G+C++     A   L +MV  G  PD +SY T
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +ING  + + +D+A  ++ KM  +G  P+VITY  ++ GFCR G +  +  ++ +M E+G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
             P+  TY  +++G  S   L  A +   EM + G  P D F
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  320 bits (820), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 166/488 (34%), Positives = 268/488 (54%), Gaps = 4/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K+D A     +M  K +YPD VTY  LI+   ++  ++EA+ L      KG
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEM-LQMGLSPDTATYNTLLVESCRKENMSEA 119
             P V TYN++I+GLCK GR + A  + D+M +  G  P   TY+TL+   CR   + + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  EM+ RG AP+ V+++TL+      G+   A     +M + G  P+ + + +II G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 180 YCRNGFVLEALKMRDE--MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            C+ G +  A ++ DE  M+E G   DV+T+N++L+GLC+ + + +A ++F   LERG  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T++TLI G  K   M++AL L   M +   + + VTY+T++DG  KVG ME A  +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M      P+ ++Y  LI+G+     + EA  L  EM+  G  P++V+  T+  G CR
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV-PDVI 416
           SG   +A E L  M + G  P++I+Y+++++G  +   + +A     KM    +V P VI
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            Y+ ++ G C+ G++ ++   L RMI  G  PD  T++ LING      +         M
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGM 480

Query: 477 LQRGFVPD 484
            +RG VPD
Sbjct: 481 AERGCVPD 488



 Score =  301 bits (772), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 150/440 (34%), Positives = 248/440 (56%), Gaps = 3/440 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+DH++D     L EM  +G  P+ VTYNTL+NA   +G  +EAF L+  M+  G
Sbjct: 107 LIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANG 166

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEM--LQMGLSPDTATYNTLLVESCRKENMSE 118
             P + T+  +I GLCK+G  + A  V+DEM  ++ GLSPD  T+N++L   C+++ + +
Sbjct: 167 CPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILD 226

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F     RG  P++V++STLI   S+  ++D AL    +M   G   + V Y+ +++
Sbjct: 227 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD 286

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G  + G + +A+ +  +M + GC+ D VTYNT+++G  + + L EA  L  EMLE G  P
Sbjct: 287 GLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHP 346

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
              T+TTL HG C+ G  ++A+ + D M  +   P+ +TY++++DG CK G + +A   +
Sbjct: 347 SVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYF 406

Query: 299 ADMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             M   + ++P+ I+Y  LI+G C  G + EA+     M+  G  P +V+ + +I G C 
Sbjct: 407 EKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCD 466

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +G      E    M   G  PD ++Y TL++   R   +D+AF L  +M + GL PD  T
Sbjct: 467 AGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRST 526

Query: 418 YNVILTGFCRQGRMHDSELI 437
              ++ G     R  D++ I
Sbjct: 527 RRTMIHGLLEVNRDEDAKRI 546


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  320 bits (820), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 165/485 (34%), Positives = 274/485 (56%), Gaps = 2/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+   +  ++  L ++ ++GV P+  T N  I  +C+   L EA +L++ + G+G
Sbjct: 222 LIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRG 280

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TYN+LI GLCK  +   A+  L +M+  G  PD  TYN+++   C+   M  A+
Sbjct: 281 LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNAD 340

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  + + +G  PD  ++ +LI    ++G +DRA+  F E    GL P+ VL   ++ G 
Sbjct: 341 QILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGL 400

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +L+ALK+ +EM E GC  D+ TYN ++NGLC+   +++AD+L  + + +G  PD 
Sbjct: 401 SQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDV 460

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF TLI G+CK   ++ A+ + D M    + PD++TYN++++G CK G+ E     +  
Sbjct: 461 FTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKL 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   PN I+Y IL   +C    V EA  L  EM  KG+ P +V+  T++KG+C +GD
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580

Query: 361 ASKADEFLSKMVSEGVDPDSIS-YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A +   ++  +     +I+ YN +IN F  + NM+ A  L +KM   G  PD  TY 
Sbjct: 581 LDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYR 640

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++ GFC+ G ++     L   IEKGL P  +T+  ++N    +  + EA      M+ +
Sbjct: 641 VMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHK 700

Query: 480 GFVPD 484
           G VP+
Sbjct: 701 GIVPE 705



 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 259/472 (54%), Gaps = 1/472 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +    D A      M  KG+ PD  T+   + ++CR      A +L+N+M  +G
Sbjct: 117 IMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +     Y ++I G  ++     A E+ +EML +G+ PD   +N L+   CRK ++ E+E
Sbjct: 177 CESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESE 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  ++ +RGV+P++ + +  I  F +   L+ A+     +   GL PD + Y  +I G 
Sbjct: 237 RLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGL 295

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+N  V+EA     +M+ +G   D  TYN+I++G C+  M+  AD +  +   +G  PD 
Sbjct: 296 CKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDE 355

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI+G C+DG++++A+N+F+   +K +KP++V  NTL+ G  + G + +A KL  +
Sbjct: 356 STYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     SP+  +Y ++ING C +G V++A  L  + + KG  P + + NT+I GYC+   
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E + +M + GV PD I+YN+++NG  +    +        M  +G VP++ITYN+
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNI 535

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           +   FC+  ++ ++  ++  M  KGL PD   + TL+ G     +L  A++ 
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQL 587



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 236/457 (51%), Gaps = 1/457 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   +YN ++N      + ++A ++   M  KG+ P V+T+   +   C+  R   A+ +
Sbjct: 109 PSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRL 168

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ M   G       Y T++     + +  EA E+F EM   G+ PDI++F+ LI    R
Sbjct: 169 LNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCR 228

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +  +     ++   G+ P+     I I G+C+   + EA+++ D  + +G   DV+T
Sbjct: 229 KGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVIT 287

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++ GLC+   + EA+    +M+  G  PD +T+ ++I G+CK G M  A  +     
Sbjct: 288 YNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGA 347

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K   PD  TY +LI+G C+ G++++A  ++ + + + + PN +    L+ G    G + 
Sbjct: 348 FKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLIL 407

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A +L  EM   G  P + + N +I G C+ G  S AD  +   +++G  PD  ++NTLI
Sbjct: 408 QALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLI 467

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+ ++  +D A  +V +M N G+ PDVITYN IL G C+ G+  D       M+EKG  
Sbjct: 468 DGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCV 527

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TY  L         ++EA    +EM  +G  PD
Sbjct: 528 PNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPD 564



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 211/418 (50%), Gaps = 36/418 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+ K+  A+ +L +M  +G  PD  TYN++I+ YC+ G ++ A Q++   + KG
Sbjct: 291 LICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKG 350

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL------------------------ 96
             P   TY SLINGLC+ G  DRA  V +E ++ GL                        
Sbjct: 351 FVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQAL 410

Query: 97  -----------SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                      SPD  TYN ++   C+   +S+A+ +  +   +G  PD+ +F+TLI  +
Sbjct: 411 KLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGY 470

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  +LD A+     M + G+ PD + Y  I+NG C+ G   + +     M+EKGCV ++
Sbjct: 471 CKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNI 530

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD- 264
           +TYN +    C+A+ + EA +L  EM  +G+ PD   F TL+ G C +G+++ A  LF  
Sbjct: 531 ITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKR 590

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +  Q      I TYN +I+ F     M  A KL+  M     SP+  +Y ++I+G+C  G
Sbjct: 591 VDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTG 650

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           ++   +      + KG+ P+L +   ++   C      +A   +  MV +G+ P+ ++
Sbjct: 651 NINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN 708



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 224/476 (47%), Gaps = 42/476 (8%)

Query: 48  EAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM---LQMGLSPDTATY 103
           +A ++ NS+  + G K  + TY  +I  L   G  +  +EVL E    +  GL      Y
Sbjct: 22  KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLL--EGVY 79

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
              +    RK  + EA ++F  M      P + S++ ++ I       D+A   +  M+ 
Sbjct: 80  IGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRD 139

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
            G+VPD   +TI +  +CR      A ++ + M  +GC    V Y T++ G        E
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE 199

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A +LF EML  G+ PD   F  LIH  C+ G++ ++  L + + ++ + P++ T N  I 
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQ 259

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           GFC+   + +A +L  D + R ++P+ I+Y  LI G C    V EA     +MV +G +P
Sbjct: 260 GFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEP 318

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF--- 400
              + N+II GYC+ G    AD+ L     +G  PD  +Y +LING  ++ ++D+A    
Sbjct: 319 DGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVF 378

Query: 401 ----------------ALVSKMENQGLV----------------PDVITYNVILTGFCRQ 428
                            LV  +  QGL+                PD+ TYN+++ G C+ 
Sbjct: 379 NEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKI 438

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G + D++ ++   I KG  PD  T+ TLI+G+  +  L  A    D M   G  PD
Sbjct: 439 GCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPD 494



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 188/395 (47%), Gaps = 51/395 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+D  ID A     E  +KG+ P+ V  NTL+    ++G + +A +LMN MS  G
Sbjct: 361 LINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P ++TYN +INGLCK G    A  ++ + +  G  PD  T+NTL+   C+K  +  A 
Sbjct: 421 CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAI 480

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI   M   GV+PD++++++++    + G+ +  +  F+ M   G VP+ + Y I+   +
Sbjct: 481 EIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESF 540

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC------------------------ 216
           C+   V EAL + +EM  KG   DVV + T++ G C                        
Sbjct: 541 CKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHT 600

Query: 217 -----------RAKM-LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
                        K+ +  A+ LFN+M E G  PD YT+  +I G CK GN+N   +   
Sbjct: 601 IATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLL 660

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI------------S 312
           +  +K + P + T+  +++  C    + +A  +   M+ + I P  +            +
Sbjct: 661 VKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNTIFEADKKEVAA 720

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
             I++      GH+T      YE++  GI+   +S
Sbjct: 721 PKIVVENLMKKGHIT---YFAYEILHDGIRDKKLS 752



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 178/378 (47%), Gaps = 42/378 (11%)

Query: 113 KENMSEAEEIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQ---LDRALMYFREMKSAGLVP 168
           ++N  +A EIF  + +  G    ++++  +I     +G+   ++  L   R     GL+ 
Sbjct: 17  QKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLE 76

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
              +Y   +  Y R G + EA+ + + M    C   V +YN I+N L   +   +A  ++
Sbjct: 77  G--VYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVY 134

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
             M ++G+                                    PD+ T+   +  FC+ 
Sbjct: 135 MRMRDKGIV-----------------------------------PDVYTFTIRMKSFCRT 159

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
                A +L  +M S+    + ++Y  +I G+    H  EA  L+ EM+G GI P +++ 
Sbjct: 160 SRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAF 219

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I   CR G   +++  L+K++  GV P+  + N  I GF +   +++A  L+  +  
Sbjct: 220 NKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-G 278

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +GL PDVITYN ++ G C+  ++ ++E  L +M+ +G  PD  TY ++I+G+     ++ 
Sbjct: 279 RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQN 338

Query: 469 AFRFHDEMLQRGFVPDDA 486
           A +   +   +GFVPD++
Sbjct: 339 ADQILRDGAFKGFVPDES 356


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  320 bits (819), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 168/487 (34%), Positives = 273/487 (56%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K++ A   L  M   G  P++ T+  LI  YCRE  +  A +L++ M  + 
Sbjct: 86  LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 145

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   +Y ++INGLC       A ++L++M   GL P+   Y+TL++    +  + EA 
Sbjct: 146 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEAR 205

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   MS  GVAPDI  ++ +I   S+ G+++ A  Y  E++  GL PD V +   I GY
Sbjct: 206 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 265

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA K  DEML+ G + +   Y  ++NG  +A  L EA  +F  +   GV PD 
Sbjct: 266 SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDV 325

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T +  IHG  K+G + +AL +F  + +K + PD+ TY++LI GFCK GE+EKA +L  +
Sbjct: 326 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 385

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I+PN   Y  L++G C  G +  A +L+  M  KG++P  V+ +T+I GYC+S +
Sbjct: 386 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 445

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A     +M S+GV P S  YN L++G  +E +M+KA  L  +M  +G     +++N 
Sbjct: 446 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNT 504

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G+C+  ++ ++  +   MI K + PD  TYTT+I+ H     ++EA     EM +R 
Sbjct: 505 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 564

Query: 481 FVPDDAF 487
            + D  F
Sbjct: 565 LIVDTVF 571



 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 163/516 (31%), Positives = 281/516 (54%), Gaps = 36/516 (6%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            LC+  +++ AK+   EM++ G+ PD    + LI+ + REG ++E  ++ + M   G+  
Sbjct: 19  GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 78

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + TYN LI+GLCK G+ ++A E+L  M+ +G  P++ T+  L+   CR+ NM  A E+ 
Sbjct: 79  NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 138

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +R + P  VS+  +I        L  A     +M  +GL P+ V+Y+ +I GY   
Sbjct: 139 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 198

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA-KM---------------------- 220
           G + EA ++ D M   G   D+  YN I++ L +A KM                      
Sbjct: 199 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 258

Query: 221 ------------LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
                       +TEA   F+EML+ G+ P+   +T LI+GH K GN+ +AL++F  +  
Sbjct: 259 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 318

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PD+ T +  I G  K G +++A K+++++  + + P+  +Y  LI+G+C  G V +
Sbjct: 319 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 378

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           AF L  EM  KGI P +   N ++ G C+SGD  +A +    M  +G++PDS++Y+T+I+
Sbjct: 379 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 438

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ + EN+ +AF+L  +M ++G+ P    YN ++ G C++G M  +  +   M++KG   
Sbjct: 439 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT 498

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             S + TLI+G+     ++EA +   EM+ +  +PD
Sbjct: 499 TLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 533



 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 161/492 (32%), Positives = 266/492 (54%), Gaps = 18/492 (3%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           +I+ A+  L  M   GV PD   YN +I+   + G +EEA   +  + G+GLKP   T+ 
Sbjct: 200 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 259

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           + I G  K G+   A +  DEML  GL P+   Y  L+    +  N+ EA  IF  +   
Sbjct: 260 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHAL 319

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           GV PD+ + S  I    +NG++  AL  F E+K  GLVPD   Y+ +I+G+C+ G V +A
Sbjct: 320 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 379

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            ++ DEM  KG   ++  YN +++GLC++  +  A  LF+ M E+G+ PD  T++T+I G
Sbjct: 380 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 439

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           +CK  N+ +A +LF  M  K ++P    YN L+ G CK G+MEKA  L+ +M+ +  +  
Sbjct: 440 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT 499

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD---- 365
            +S+  LI+GYC    + EA +L+ EM+ K I P  V+  T+I  +C++G   +A+    
Sbjct: 500 -LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 558

Query: 366 -------------EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
                            KMV++GV PD ++Y  +I    +E+N+ +AF L  ++  +G++
Sbjct: 559 EMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 618

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
                +++++T  C++  + ++  +L  M E GL P  +  +TL+        + EA R 
Sbjct: 619 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 678

Query: 473 HDEMLQRGFVPD 484
            + +   G VPD
Sbjct: 679 FEGVKSLGLVPD 690



 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 271/486 (55%), Gaps = 18/486 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  K++ A  +L E++ +G+ PD VT+   I  Y + G + EA +  + M   G
Sbjct: 226 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 285

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    Y  LING  K G    A  +   +  +G+ PD  T +  +    +   + EA 
Sbjct: 286 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 345

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F E+  +G+ PD+ ++S+LI  F + G++++A     EM   G+ P+  +Y  +++G 
Sbjct: 346 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 405

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  A K+ D M EKG   D VTY+T+++G C+++ + EA  LF+EM  +GV P  
Sbjct: 406 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 465

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +  L+HG CK+G+M KA+NLF  M QK     + ++NTLIDG+CK  ++++A++L+ +
Sbjct: 466 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQE 524

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEA-----------------FRLWYEMVGKGIKP 343
           MI+++I P++++Y  +I+ +C  G + EA                 F L+ +MV KG+KP
Sbjct: 525 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKP 584

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
             V+   +I  +C+  +  +A +   ++V +G+      ++ LI    + E++ +A  L+
Sbjct: 585 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 644

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            +M   GL P +   + ++  F   G+M ++  +   +   GL PD +T   L+NG+++ 
Sbjct: 645 DEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLND 704

Query: 464 NNLKEA 469
            + ++A
Sbjct: 705 TDSEDA 710



 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/463 (31%), Positives = 239/463 (51%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M +KG+ P+T TY  +    CR   + EA      M   GLKP     ++LI+G  ++G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D    + D M+  G+  +  TYN L+   C+   M +A EI   M   G  P+  +F  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI  + R   + RAL    EM+   LVP  V Y  +ING C    +  A K+ ++M   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              +VV Y+T++ G      + EA  L + M   GV PD + +  +I    K G M +A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
                +  + +KPD VT+   I G+ K G+M +A K + +M+   + PN   Y +LING+
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G++ EA  ++  +   G+ P + +C+  I G  ++G   +A +  S++  +G+ PD 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +Y++LI+GF ++  ++KAF L  +M  +G+ P++  YN ++ G C+ G +  +  +   
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           M EKGL PD  TY+T+I+G+    N+ EAF    EM  +G  P
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP 463



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 103/292 (35%), Positives = 162/292 (55%)

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M EKG V +  TY  I  GLCRAK + EA   F EM + G+ PD+   + LI G  ++G+
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +++ L + D+M    I  +++TYN LI G CK G+MEKA ++   MI+    PN  ++ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LI GYC   ++  A  L  EM  + + P+ VS   +I G C   D S A++ L KM   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           + P+ + Y+TLI G+  E  +++A  L+  M   G+ PD+  YN I++   + G+M ++ 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
             L  +  +GL PD  T+   I G+     + EA ++ DEML  G +P++  
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 292



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 177/319 (55%), Gaps = 18/319 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK   I  A+     M +KG+ PD+VTY+T+I+ YC+   + EAF L + M  KG
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  F YN+L++G CK+G  ++A  +  EMLQ G +  T ++NTL+   C+   + EA 
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEAS 519

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK-----------------S 163
           ++F EM  + + PD V+++T+I    + G+++ A + F+EM+                 +
Sbjct: 520 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVA 579

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
            G+ PD V Y ++I  +C+   ++EA K+RDE++ KG +     ++ ++  LC+ + LTE
Sbjct: 580 KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 639

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A  L +EM E G+ P     +TL+    + G M++A  +F+ +    + PD  T   L++
Sbjct: 640 ASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 699

Query: 284 GFCKVGEMEKANKLWADMI 302
           G     + E A  L   ++
Sbjct: 700 GNLNDTDSEDARNLIKQLV 718


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  320 bits (819), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 162/487 (33%), Positives = 270/487 (55%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +  ++    ++ ++GV P+  T+N  I   CR+G ++EA +L+ S+  +G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V +YN+LI G CK  +   A+  L +M+  G+ P+  TYNT++   C+   M  A+
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  +   +G  PD  ++S+LI     +G ++RA+  F E    G     +LY  ++ G 
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G VL+AL++  +M+E GC  D+ TYN ++NGLC+   L++A+ + N+ + +G  PD 
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF TLI G+CK  NM+KA+ + D M    I PD++TYNTL++G CK  +++     +  
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +  +PN I+Y ILI  +C    V+EA  L+ EM  +G+ P +V+  T+I G C +G+
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             KA E    +  E      +  +N +IN F  + N+  A  L  KM      PD  TY 
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++  +C+ G +  +   L   I KGL P  +T   ++N     + L EA    + M+Q 
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 480 GFVPDDA 486
           G VP++ 
Sbjct: 702 GIVPEEV 708



 Score =  315 bits (807), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 155/452 (34%), Positives = 260/452 (57%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M+  G+YPD  T+   + ++C  G    A +L+N+M G+G +    +Y ++I+G  K+  
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A  + DEML+ G+ PD  T+N L+   C+K N+ E+E++F ++ +RGV P++ +F+ 
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I    R G +D A      + S GL PD + Y  +I G+C++  ++EA     +M+  G
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              +  TYNTI+NG C+A M+  AD +  + + +G  PD +T+++LI+G C DG+MN+A+
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            +F    +K  K  I+ YNTL+ G  K G + +A +L  DM+    SP+  +Y +++NG 
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C MG +++A  +  + + KG  P + + NT+I GYC+  +  KA E L  M+S G+ PD 
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           I+YNTL+NG  +   +D        M  +G  P++ITYN+++  FC+  ++ ++  +   
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKE 556

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           M  +GL PD  T  TLI G  S   L +A+  
Sbjct: 557 MKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588



 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 256/465 (55%), Gaps = 1/465 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM ++G+ PD +T+N LI+  C++G ++E+ +L + +  +G+ P +FT+N  I GLC+KG
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D A  +L+ ++  GL+PD  +YNTL+   C+   + EAE    +M   GV P+  +++
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I  F + G +  A    R+    G +PD   Y+ +ING C +G +  A+ +  E +EK
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G    ++ YNT++ GL +  ++ +A  L  +M+E G  PD +T+  +++G CK G ++ A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             + +    K   PDI T+NTLIDG+CK   M+KA ++   M+S  I+P+ I+Y  L+NG
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C    +      +  M+ KG  P +++ N +I+ +C+    S+A E   +M + G+ PD
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQ-GLVPDVITYNVILTGFCRQGRMHDSELIL 438
            ++  TLI G      +DKA+ L   +E +         +N+++  FC +  +  +E + 
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLF 625

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +M      PD  TY  +I+ +    N+  A  F  E + +G VP
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670



 Score =  272 bits (695), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 240/457 (52%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   +YN ++N     G+  +A ++   M   G+ P V+T+   +   C  GR   A  +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ M   G   +  +Y  ++    ++    EA  +F EM ++G+ PDI++F+ LI +  +
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +  +   F ++   G+ P+   + I I G CR G + EA ++ + ++ +G   DV++
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++ G C+   L EA+   ++M+  GV P+ +T+ T+I+G CK G M  A  +     
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K   PD  TY++LI+G C  G+M +A  ++ + + +    + I Y  L+ G    G V 
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A +L  +M+  G  P + + N ++ G C+ G  S A+  L+  +++G  PD  ++NTLI
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+ ++ NMDKA  ++  M + G+ PDVITYN +L G C+  ++ +       M+EKG  
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TY  LI        + EA     EM  RG  PD
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 239/473 (50%), Gaps = 37/473 (7%)

Query: 49  AFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTL 106
           A ++ N +  + G K  + TY  +I  L   G+ +  ++VL EM + +        Y  +
Sbjct: 23  ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
           + +  RK  + EA  +F  M      P + S++ ++ I    G   +A   +  MK  G+
Sbjct: 83  MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            PD   +TI +  +C  G    AL++ + M  +GC  + V+Y  +++G  +     EA  
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH 202

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           LF+EML++G+ PD  TF  LIH  CK GN+ ++  LF  + ++ + P++ T+N  I G C
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           + G +++A +L   ++S  ++P+ ISY  LI G+C    + EA    ++MV  G++P   
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA----- 401
           + NTII G+C++G    AD+ L   + +G  PD  +Y++LING   + +M++A A     
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 402 --------------LVSKMENQGLV----------------PDVITYNVILTGFCRQGRM 431
                         LV  +  QGLV                PD+ TYN+++ G C+ G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D+  IL   I KG  PD  T+ TLI+G+  Q N+ +A    D ML  G  PD
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 212/418 (50%), Gaps = 36/418 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  K+  A+ +L +M   GV P+  TYNT+IN +C+ G ++ A +++     KG
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY+SLINGLC  G  +RA  V  E ++ G       YNTL+    ++  + +A 
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M   G +PDI +++ ++    + G L  A     +  + G +PD   +  +I+GY
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGY 471

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A+++ D ML  G   DV+TYNT+LNGLC+A+ L    D F  MLE+G  P+ 
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA------ 294
            T+  LI   CKD  +++A+ LF  M  + + PDIVT  TLI G C  GE++KA      
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591

Query: 295 ------------------------------NKLWADMISRKISPNYISYGILINGYCSMG 324
                                          KL+  M     +P+  +Y ++I+ YC  G
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           ++  A     E + KG+ P+  +C  ++   C +   S+A   ++ MV  G+ P+ ++
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 155/314 (49%), Gaps = 35/314 (11%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           +Y  I+  Y R G V EA+ + + M    C   V +YN I+N L      ++A  ++  M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
            + G++P                                   D+ T+   +  FC  G  
Sbjct: 138 KDIGIYP-----------------------------------DVYTHTIRMKSFCITGRP 162

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
             A +L  +M  +    N +SY  +I+G+       EA+ L+ EM+ +GI P +++ N +
Sbjct: 163 TAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKL 222

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I   C+ G+  ++++  SK++  GV P+  ++N  I G  R+  +D+A  L+  + ++GL
Sbjct: 223 IHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGL 282

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            PDVI+YN ++ GFC+  ++ ++E  L +M+  G+ P+  TY T+ING      ++ A +
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 472 FHDEMLQRGFVPDD 485
              + + +GF+PD+
Sbjct: 343 ILRDAMFKGFIPDE 356


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  320 bits (819), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 163/465 (35%), Positives = 270/465 (58%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G+ P  VTYNTL+++YC+ G +++   L++ M  +G  P   TYN LINGL KKG 
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            ++AK ++ EML+ GL     TYN L+     K  ++EA  +  EM  +G +P + ++++
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I    + G++  A+    +M +  L+PD V Y  +I GYCR G +++A  + DE+    
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
               +VTYNT+L+GLCR   L  A  L  EM+  G+ PD  T+T L++G CK G+++ A 
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQ 464

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             FD M  + ++ D   Y T I G  K+G+  +A  L  +M+++   P+ I Y ++++G 
Sbjct: 465 EFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +G++ EA  L  +MV  G+ P  V+  +II  +  +G   K  E   +M+S+G+ P  
Sbjct: 525 CKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSV 584

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++Y  LI+G   +  +++AF   S+M+ +G++P+VITYN ++ G C+  RM  +      
Sbjct: 585 VTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAE 644

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           M+EKG+ P++ +YT LIN + +  N +EA   + +ML RG  PD 
Sbjct: 645 MVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689



 Score =  310 bits (795), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 153/457 (33%), Positives = 267/457 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++ CK  K+      L EM+++G  P+ VTYN LIN   ++G  E+A  L+  M   G
Sbjct: 240 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK   +TYN LI G   KG    A  + +EM+  G SP  ATYN+ +   C+   MS+A 
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 359

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   +M    + PD+VS++TLI  + R G L +A + F E++S  L P  V Y  +++G 
Sbjct: 360 QQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGL 419

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A +++ EM+ +G   D+VTY  ++NG C+   L+ A + F+EML  G+  D 
Sbjct: 420 CRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDS 479

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y + T I G  K G+ ++A +L + M  K   PD++ YN ++DG CK+G +E+A++L   
Sbjct: 480 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 539

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+Y++Y  +I+ +   G + +   ++YEM+ KG+ P++V+   +I G+   G 
Sbjct: 540 MVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGR 599

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A  + S+M  +G+ P+ I+YN+LING  +   MD+A+   ++M  +G+ P+  +Y +
Sbjct: 600 LERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTI 659

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           ++   C  G   ++  +  +M+++G+ PD  T++ L+
Sbjct: 660 LINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696



 Score =  301 bits (771), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 157/449 (34%), Positives = 253/449 (56%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           LI  Y ++  +E+   + + M    L P V   N ++  L  K    +A EV   M + G
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           + P   TYNTLL   C+   + +  ++  EM RRG AP+ V+++ LI   S+ G+ ++A 
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
               EM   GL      Y  +I GY   G + EAL +++EM+ KG    V TYN+ + GL
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
           C+   +++A    ++ML   + PD  ++ TLI+G+C+ GN+ KA  LFD +    + P I
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 409

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           VTYNTL+DG C+ GE+E A +L  +MI+  I+P+ ++Y IL+NG C MG ++ A   + E
Sbjct: 410 VTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 469

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M+ +G++    +  T I G  + GD S+A     +M+++G  PD I YN +++G  +  N
Sbjct: 470 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN 529

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +++A  L+ KM + G++PD +TY  I+      GR+     I + M+ KGL P   TYT 
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           LI+GH  +  L+ AF +  EM ++G +P+
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPN 618



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 208/352 (59%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  LCK  ++  A   L +M    + PD V+YNTLI  YCR G L +AF L + +    L
Sbjct: 346 IYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYL 405

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P + TYN+L++GLC++G  + A+++  EM+  G++PD  TY  L+  SC+  ++S A+E
Sbjct: 406 FPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
            F EM   G+  D  +++T I    + G   RA     EM + G  PD ++Y ++++G C
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G + EA ++  +M+  G + D VTY +I++       L +  ++F EML +G+ P   
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVV 585

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+T LIHGH   G + +A   F  M +K I P+++TYN+LI+G CKV  M++A   +A+M
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           + + I PN  SY ILIN  C+MG+  EA  L+ +M+ +G++P   + + ++K
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/311 (36%), Positives = 172/311 (55%)

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I  Y +   V + L + D+M++     DV   N IL  L    ++++A +++  M E 
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G+ P   T+ TL+  +CK G + + L+L   M ++   P+ VTYN LI+G  K GE E+A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L  +M+   +  +  +Y  LI GY + G + EA  L  EMV KG  PT+ + N+ I G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+ G  S A + LS M++  + PD +SYNTLI G+ R  N+ KAF L  ++ +  L P 
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           ++TYN +L G CRQG +  ++ +   MI +G+ PD  TYT L+NG     +L  A  F D
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468

Query: 475 EMLQRGFVPDD 485
           EML  G   D 
Sbjct: 469 EMLHEGLELDS 479



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 144/288 (50%), Gaps = 35/288 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG-------FLEE----- 48
           +++ LC+  +++ A+    EM  +G+ PD VTY  L+N  C+ G       F +E     
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474

Query: 49  -----------------------AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                                  AF L   M  KG  P +  YN +++GLCK G  + A 
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           E+L +M+  G+ PD  TY +++        + +  EIF EM  +G+ P +V+++ LI   
Sbjct: 535 ELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGH 594

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           +  G+L+RA +YF EM+  G++P+ + Y  +ING C+   + +A     EM+EKG   + 
Sbjct: 595 AGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNK 654

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
            +Y  ++N  C      EA  L+ +ML+RGV PD  T + L+    KD
Sbjct: 655 YSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 162/487 (33%), Positives = 270/487 (55%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +  ++    ++ ++GV P+  T+N  I   CR+G ++EA +L+ S+  +G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V +YN+LI G CK  +   A+  L +M+  G+ P+  TYNT++   C+   M  A+
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  +   +G  PD  ++S+LI     +G ++RA+  F E    G     +LY  ++ G 
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G VL+AL++  +M+E GC  D+ TYN ++NGLC+   L++A+ + N+ + +G  PD 
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF TLI G+CK  NM+KA+ + D M    I PD++TYNTL++G CK  +++     +  
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +  +PN I+Y ILI  +C    V+EA  L+ EM  +G+ P +V+  T+I G C +G+
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             KA E    +  E      +  +N +IN F  + N+  A  L  KM      PD  TY 
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++  +C+ G +  +   L   I KGL P  +T   ++N     + L EA    + M+Q 
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 480 GFVPDDA 486
           G VP++ 
Sbjct: 702 GIVPEEV 708



 Score =  315 bits (807), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 155/452 (34%), Positives = 260/452 (57%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M+  G+YPD  T+   + ++C  G    A +L+N+M G+G +    +Y ++I+G  K+  
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A  + DEML+ G+ PD  T+N L+   C+K N+ E+E++F ++ +RGV P++ +F+ 
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I    R G +D A      + S GL PD + Y  +I G+C++  ++EA     +M+  G
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              +  TYNTI+NG C+A M+  AD +  + + +G  PD +T+++LI+G C DG+MN+A+
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            +F    +K  K  I+ YNTL+ G  K G + +A +L  DM+    SP+  +Y +++NG 
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C MG +++A  +  + + KG  P + + NT+I GYC+  +  KA E L  M+S G+ PD 
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           I+YNTL+NG  +   +D        M  +G  P++ITYN+++  FC+  ++ ++  +   
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKE 556

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           M  +GL PD  T  TLI G  S   L +A+  
Sbjct: 557 MKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588



 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 256/465 (55%), Gaps = 1/465 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM ++G+ PD +T+N LI+  C++G ++E+ +L + +  +G+ P +FT+N  I GLC+KG
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D A  +L+ ++  GL+PD  +YNTL+   C+   + EAE    +M   GV P+  +++
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I  F + G +  A    R+    G +PD   Y+ +ING C +G +  A+ +  E +EK
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G    ++ YNT++ GL +  ++ +A  L  +M+E G  PD +T+  +++G CK G ++ A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             + +    K   PDI T+NTLIDG+CK   M+KA ++   M+S  I+P+ I+Y  L+NG
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C    +      +  M+ KG  P +++ N +I+ +C+    S+A E   +M + G+ PD
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQ-GLVPDVITYNVILTGFCRQGRMHDSELIL 438
            ++  TLI G      +DKA+ L   +E +         +N+++  FC +  +  +E + 
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLF 625

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +M      PD  TY  +I+ +    N+  A  F  E + +G VP
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 240/457 (52%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   +YN ++N     G+  +A ++   M   G+ P V+T+   +   C  GR   A  +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ M   G   +  +Y  ++    ++    EA  +F EM ++G+ PDI++F+ LI +  +
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +  +   F ++   G+ P+   + I I G CR G + EA ++ + ++ +G   DV++
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++ G C+   L EA+   ++M+  GV P+ +T+ T+I+G CK G M  A  +     
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K   PD  TY++LI+G C  G+M +A  ++ + + +    + I Y  L+ G    G V 
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A +L  +M+  G  P + + N ++ G C+ G  S A+  L+  +++G  PD  ++NTLI
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+ ++ NMDKA  ++  M + G+ PDVITYN +L G C+  ++ +       M+EKG  
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TY  LI        + EA     EM  RG  PD
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 239/473 (50%), Gaps = 37/473 (7%)

Query: 49  AFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTL 106
           A ++ N +  + G K  + TY  +I  L   G+ +  ++VL EM + +        Y  +
Sbjct: 23  ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
           + +  RK  + EA  +F  M      P + S++ ++ I    G   +A   +  MK  G+
Sbjct: 83  MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            PD   +TI +  +C  G    AL++ + M  +GC  + V+Y  +++G  +     EA  
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH 202

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           LF+EML++G+ PD  TF  LIH  CK GN+ ++  LF  + ++ + P++ T+N  I G C
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           + G +++A +L   ++S  ++P+ ISY  LI G+C    + EA    ++MV  G++P   
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA----- 401
           + NTII G+C++G    AD+ L   + +G  PD  +Y++LING   + +M++A A     
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 402 --------------LVSKMENQGLV----------------PDVITYNVILTGFCRQGRM 431
                         LV  +  QGLV                PD+ TYN+++ G C+ G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D+  IL   I KG  PD  T+ TLI+G+  Q N+ +A    D ML  G  PD
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 212/418 (50%), Gaps = 36/418 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  K+  A+ +L +M   GV P+  TYNT+IN +C+ G ++ A +++     KG
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY+SLINGLC  G  +RA  V  E ++ G       YNTL+    ++  + +A 
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M   G +PDI +++ ++    + G L  A     +  + G +PD   +  +I+GY
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGY 471

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A+++ D ML  G   DV+TYNT+LNGLC+A+ L    D F  MLE+G  P+ 
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA------ 294
            T+  LI   CKD  +++A+ LF  M  + + PDIVT  TLI G C  GE++KA      
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591

Query: 295 ------------------------------NKLWADMISRKISPNYISYGILINGYCSMG 324
                                          KL+  M     +P+  +Y ++I+ YC  G
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           ++  A     E + KG+ P+  +C  ++   C +   S+A   ++ MV  G+ P+ ++
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 155/314 (49%), Gaps = 35/314 (11%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           +Y  I+  Y R G V EA+ + + M    C   V +YN I+N L      ++A  ++  M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
            + G++P                                   D+ T+   +  FC  G  
Sbjct: 138 KDIGIYP-----------------------------------DVYTHTIRMKSFCITGRP 162

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
             A +L  +M  +    N +SY  +I+G+       EA+ L+ EM+ +GI P +++ N +
Sbjct: 163 TAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKL 222

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I   C+ G+  ++++  SK++  GV P+  ++N  I G  R+  +D+A  L+  + ++GL
Sbjct: 223 IHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGL 282

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            PDVI+YN ++ GFC+  ++ ++E  L +M+  G+ P+  TY T+ING      ++ A +
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 472 FHDEMLQRGFVPDD 485
              + + +GF+PD+
Sbjct: 343 ILRDAMFKGFIPDE 356


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 166/490 (33%), Positives = 271/490 (55%), Gaps = 7/490 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  +ID A+    EM  K + P+    + LI+  C+     +A +   +M G G
Sbjct: 15  LLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSG 74

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +      Y +L++GL K+ R D+A  +L EM   G  P+  TYN+L+   C+      A+
Sbjct: 75  IVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQ 134

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM---KSAGL----VPDNVLY 173
           E+F  M     +P +V+++TL+    R G+L+RA+  F+EM   +S  +     P+ + Y
Sbjct: 135 ELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITY 194

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           +++I+G C+   V +A+++ + M  +GC  DV+TY  +++GLC+   +  A ++  EML+
Sbjct: 195 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 254

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G  P+  T+ +L+HG C+   ++ AL L   MT +   P++VTY TLIDG CKVG ++ 
Sbjct: 255 AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKD 314

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  + ADMI +  +P+ + Y +LING C    V E+  L    V  GIKP +V+ +++I 
Sbjct: 315 ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIY 374

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G CRS    +A   L  + S G  PD I Y+TLI+G  +   +D+AF L   M   G   
Sbjct: 375 GLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDA 434

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           DV+TY+ ++ G C+ GR+ ++ L+L RM+  G  P   TY +LI G    N+L EA    
Sbjct: 435 DVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELV 494

Query: 474 DEMLQRGFVP 483
           +EM +    P
Sbjct: 495 EEMERSNCAP 504



 Score =  311 bits (796), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 177/533 (33%), Positives = 280/533 (52%), Gaps = 51/533 (9%)

Query: 1   MVNALCKDHK-IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++ LCK  + ID+ + F   M+  G+  DTV Y  L++   +E  L++A  +++ M   
Sbjct: 50  LIDGLCKAKRSIDALRCFR-AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDH 108

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P V TYNSLI+GLCK    DRA+E+ + M  +  SP   TYNTLL    R   +  A
Sbjct: 109 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 168

Query: 120 EEIFCEM-SRRG------VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
             +F EM  RR        +P+++++S LI    +  ++ +A+     MK+ G  PD + 
Sbjct: 169 MALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVIT 228

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           YTI+++G C+   V  A ++  EML+ GCV ++VTYN++L+GLCRA+ +++A  L  +M 
Sbjct: 229 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 288

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS---------------------- 270
            RG  P+  T+ TLI G CK G +  A  +   M  K                       
Sbjct: 289 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 348

Query: 271 -------------IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
                        IKPD+VTY+++I G C+   +++A +L   + SR   P+ I Y  LI
Sbjct: 349 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 408

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G C  G V EAF L+  M G G    +V+ +T+I G C++G   +A   L++MV  G  
Sbjct: 409 DGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTP 468

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P +++YN+LI G     ++D+A  LV +ME     P  +TYN+++ G CR  R+ DS ++
Sbjct: 469 PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERV-DSAVV 527

Query: 438 LWRMIEK------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L    +       G   D   Y++LI+G      + EA  +  EM+  G +PD
Sbjct: 528 LLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPD 580



 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 146/424 (34%), Positives = 239/424 (56%), Gaps = 6/424 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ +TY+ LI+  C+   + +A +L+ SM  +G  P V TY  L++GLCK+ +   A EV
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L EML  G  P+  TYN+LL   CR   +S+A  +  +M+ RG  P++V++ TLI    +
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G++  A     +M   G  PD ++Y ++ING C+   V E++ +    +  G   DVVT
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y++++ GLCR+  L EA  L   +  RG  PD   ++TLI G CK G +++A +L+++M 
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA 428

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
                 D+VTY+TLIDG CK G +++A+ L A M+     P+ ++Y  LI G C + H+ 
Sbjct: 429 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 488

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK-----MVSEGVDPDSIS 382
           EA  L  EM      P+ V+ N +I G CR      A   L +     + + G   D+I+
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIA 548

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD-SELILWRM 441
           Y++LI+G  +   + +A     +M + G++PD ITY+++L G  +   +H+   L+L +M
Sbjct: 549 YSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQM 608

Query: 442 IEKG 445
           ++ G
Sbjct: 609 VQLG 612



 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 227/430 (52%), Gaps = 7/430 (1%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P V+TY +L+ G C+ G  D+A+   DEM    L P+    + L+   C+ +   +A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
            F  M   G+  D V ++ L+    +  +LD+AL    EM+  G  P+ V Y  +I+G C
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF---- 237
           +N     A ++ + M    C   +VTYNT+L+GL R   L  A  LF EML+R       
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 238 ---PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
              P+  T++ LI G CK   +++A+ L + M  +   PD++TY  L+DG CK  ++  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            ++  +M+     PN ++Y  L++G C    V++A  L  +M  +G  P +V+  T+I G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+ G    A   L+ M+ +G  PD + YN LING  + + +D++ AL+ +  + G+ PD
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V+TY+ ++ G CR  R+ ++  +L  +  +G  PD   Y+TLI+G      + EAF  ++
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425

Query: 475 EMLQRGFVPD 484
            M   G   D
Sbjct: 426 VMAGDGCDAD 435



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 161/326 (49%), Gaps = 42/326 (12%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC--------- 251
           C  DV TY  +L G CR   + +A   F+EM  + + P+ +  + LI G C         
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 252 --------------------------KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
                                     K+  +++AL +   M     +P++VTYN+LIDG 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK------ 339
           CK  E ++A +L+  M S + SP+ ++Y  L++G    G +  A  L+ EM+ +      
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 340 -GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
               P +++ + +I G C++   S+A E L  M + G  PD I+Y  L++G  +E  +  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A+ ++ +M + G VP+++TYN +L G CR  R+ D+  ++  M  +G  P+  TY TLI+
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G      +K+A     +M+ +G  PD
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPD 330


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  318 bits (815), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 174/518 (33%), Positives = 269/518 (51%), Gaps = 35/518 (6%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A CK    D+AK    EM ++    + VTYN +I+  CR G +EEAF     M   GL
Sbjct: 250 IEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGL 309

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P  FTY +L+NGLCK  R   AK +LDEM   GL P+   Y TL+    ++   +EA +
Sbjct: 310 SPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFD 369

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           I  EM   GV P+ + +  LI    + GQL RA    +EM   GL PD   Y  ++ G+ 
Sbjct: 370 ILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHF 429

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           +      A ++ +EM   G + +V +Y  ++NGLC+     EA +L  EM+  G+ P+ +
Sbjct: 430 QQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 489

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  LI GH K+GN++ A    + MT+ ++ PD+  YN+LI G   VG ME+A + +A +
Sbjct: 490 MYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV 549

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R + P+  +Y  LI+GYC  G++ +A +L  +M+  G+KP   +   +++GY +S D 
Sbjct: 550 QKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDY 609

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD------- 414
            K    L  M+  G  PD+  Y  +I    R ENM+ AF +++++E  GLVPD       
Sbjct: 610 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 669

Query: 415 ----------------------------VITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
                                       ++ YN ++ GFCR G +  +  +   ++ KGL
Sbjct: 670 ISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 729

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+  TYT LI+G+    ++ +AF  + EML RG  PD
Sbjct: 730 VPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPD 767



 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 155/482 (32%), Positives = 264/482 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  ++  AK  L EM   G+ P+ V Y TL++ + +EG   EAF ++  M   G
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P    Y++LI GLCK G+  RA ++L EM+++GL PDT TYN L+    ++ +   A 
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAF 438

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM   G+ P++ S+  +I    +NG+   A     EM S GL P+  +Y  +I G+
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 498

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +  A +  ++M +     D+  YN+++ GL     + EA++ + ++ +RG+ PD 
Sbjct: 499 SKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDE 558

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LIHG+CK GN+ KA  L   M    +KP+  TY  L++G+ K  + EK + +   
Sbjct: 559 FTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQS 618

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     P+   YGI+I       ++  AF +  E+   G+ P L   +++I G C+  D
Sbjct: 619 MLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIAD 678

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L +M  EG++P  + YN LI+GF R  ++ +A  +   +  +GLVP+ +TY  
Sbjct: 679 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTA 738

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G + D+  +   M+++G+ PD   Y  L  G     +L++A    +EM  RG
Sbjct: 739 LIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 798

Query: 481 FV 482
           + 
Sbjct: 799 YA 800



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/458 (31%), Positives = 237/458 (51%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P T   + L++ Y + G +  A Q++  M+  GL P     N L+  L +    +   ++
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              M   G+ PD  TY+T +   C+  +   A+++F EM RR  A + V+++ +I    R
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           +G ++ A  +  EM   GL PD   Y  ++NG C+   + EA  + DEM   G   ++V 
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T+++G  +     EA D+  EM+  GV P+   +  LI G CK G + +A  L   M 
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  ++PD  TYN L+ G  +  + + A +L  +M +  I PN  SYGI+ING C  G   
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESK 470

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L  EM+ +G+KP       +I G+ + G+ S A E L KM    V PD   YN+LI
Sbjct: 471 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLI 530

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G      M++A    ++++ +GLVPD  TY+ ++ G+C+ G +  ++ +L +M+  GL 
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLK 590

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           P+  TYT L+ G+   N+ ++       ML  G  PD+
Sbjct: 591 PNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDN 628



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 256/479 (53%), Gaps = 36/479 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK  ++  A   L EM + G+ PDT TYN L+  + ++   + AF+L+N M   G
Sbjct: 389 LIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSG 448

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V++Y  +INGLC+ G    A  +L+EM+  GL P+   Y  L++   ++ N+S A 
Sbjct: 449 ILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLAC 508

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   +M++  V PD+  +++LI   S  G+++ A  Y+ +++  GLVPD   Y+ +I+GY
Sbjct: 509 EALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 568

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG-------------------------- 214
           C+ G + +A ++  +ML  G   +  TY  +L G                          
Sbjct: 569 CKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDN 628

Query: 215 ---------LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                    L R++ +  A  +  E+ + G+ PD + +++LI G CK  +M KA+ L D 
Sbjct: 629 HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDE 688

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++ ++P IV YN LIDGFC+ G++ +A  ++  ++++ + PN ++Y  LI+G C  G 
Sbjct: 689 MAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGD 748

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +T+AF L+ EM+ +GI P     N +  G   + D  +A     +M + G    S+ +NT
Sbjct: 749 ITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSL-FNT 807

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           L++GF +   + +   L+  M ++ +VP+  T   +++ F + G++ ++  +   + +K
Sbjct: 808 LVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 186/378 (49%), Gaps = 51/378 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    +++ A+ +  +++++G+ PD  TY+ LI+ YC+ G LE+A QL+  M   G
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP   TY  L+ G  K    ++   +L  ML  G  PD   Y  ++    R ENM  A 
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 648

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E+ + G+ PD+  +S+LI    +   +++A+    EM   GL P  V Y  +I+G+
Sbjct: 649 MVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 708

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G +  A  + D +L KG V + VTY  +++G C+   +T+A DL+ EML+RG+ PD 
Sbjct: 709 CRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDA 768

Query: 241 YT----------------------------------FTTLIHGHCKDGNMNKALNLFDIM 266
           +                                   F TL+HG CK G + +   L  +M
Sbjct: 769 FVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVM 828

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             + I P+  T   ++  F K G++ +A++++A++  +K S +                 
Sbjct: 829 MDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQS----------------A 872

Query: 327 TEAFRLWY-EMVGKGIKP 343
           T+ F L + +M+ KG+ P
Sbjct: 873 TDRFSLLFTDMINKGLIP 890



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 23/301 (7%)

Query: 207 TYNTILNGLCRAKMLTEADDLFNEML-----------------------ERGVFPDFYTF 243
            +  +   LC A +  +A+ L ++M+                        R   P     
Sbjct: 117 AFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVL 176

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             L+  + K G++  A  +  +M    + P     N L+    +   ME   KL   M  
Sbjct: 177 DVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEG 236

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             I P+  +Y   I  +C       A +++ EM  +      V+ N +I G CRSG   +
Sbjct: 237 AGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 296

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A  F  +MV  G+ PD+ +Y  L+NG  +   + +A AL+ +M   GL P+++ Y  ++ 
Sbjct: 297 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVD 356

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GF ++G+  ++  IL  MI  G+ P++  Y  LI G      L  A +   EM++ G  P
Sbjct: 357 GFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRP 416

Query: 484 D 484
           D
Sbjct: 417 D 417


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  318 bits (815), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 164/467 (35%), Positives = 262/467 (56%), Gaps = 20/467 (4%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           F  EME+ G  P+ VTYNT+I+ YC+    +EAF  + SM  KGL+P + T+N +INGLC
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           + GR     EVL EM + G  PD  TYNTL+   C++ N  +A  +  EM R G++P++V
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++++LI    + G L+RA+ +F +M   GL P+   YT IING+ + G + EA ++ +EM
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
              G +  +VTYN ++NG C    + EA  L  +M+ +GV PD  +++T+I G  ++  +
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A  +   M  KS+ PD VTY++LI G C+   + +A  ++ +M++ K+ P+  +Y  L
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           IN YC  G + +A  L  EM+ KG  P  V+ N +I G  +   + +A   L K+  +  
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDS 364

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P +++YNTLI      E    A ALV                    GFC +G M +++ 
Sbjct: 365 IPSAVTYNTLIENCCNIE-FKSAVALVK-------------------GFCMKGLMDEADQ 404

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +   MI K   P+ + Y  +I+GH    N+ +A++ + EM+   FVP
Sbjct: 405 VFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVP 451



 Score =  294 bits (752), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 162/483 (33%), Positives = 257/483 (53%), Gaps = 20/483 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+D ++      L EM +KG  PD VTYNTL+N YC+EG   +A  L   M   G
Sbjct: 59  IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG 118

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY SLIN +CK G  +RA E  D+M   GL P+  TY T++    ++  + EA 
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAY 178

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+R G  P IV+++ LI      G+++ A+   ++M   G++PD V Y+ II+G+
Sbjct: 179 RVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            RN  +  A +M+ EM+ K  + D VTY++++ GLC  + LTEA D+F EML   + PD 
Sbjct: 239 ARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDE 298

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+TTLI+ +CK+G++NKAL+L D M QK   PD VTYN LI+G  K    ++A +L   
Sbjct: 299 FTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLK 358

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +      P+ ++Y  LI   C++      F+               S   ++KG+C  G 
Sbjct: 359 LFYDDSIPSAVTYNTLIENCCNI-----EFK---------------SAVALVKGFCMKGL 398

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +AD+    M+++   P+   YN +I+G  R  N+ KA+ L  +M +   VP  +T   
Sbjct: 399 MDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLA 458

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++     +G   +   ++  ++      D      L+  +  + N+   F    EM + G
Sbjct: 459 LVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDG 518

Query: 481 FVP 483
            +P
Sbjct: 519 LIP 521



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 200/331 (60%)

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
            L +F+EM+  G +P+ V Y  +I+GYC+     EA      M  KG   +++T+N I+N
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLCR   L E  ++  EM  +G  PD  T+ TL++G+CK+GN ++AL L   M +  + P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           ++VTY +LI+  CK G + +A + +  M  R + PN  +Y  +ING+   G + EA+R+ 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EM   G  P++V+ N +I G+C  G   +A   L  MV +GV PD +SY+T+I+GF R 
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           + +D+AF +  +M  + ++PD +TY+ ++ G C Q R+ ++  +   M+   L PD  TY
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TTLIN +  + +L +A   HDEM+Q+GF+PD
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPD 332


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  318 bits (815), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 160/482 (33%), Positives = 275/482 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  K+  A   L +ME +G  PD V+Y+ +++ YC+   L +  +LM  +  KG
Sbjct: 258 ILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKG 317

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TYNS+I+ LCK GR   A++VL  M    + PD   Y TL+    +  N+S   
Sbjct: 318 LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEY 377

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM R+ + PD V+++++I    + G++  A   F EM S GL PD V YT +I+GY
Sbjct: 378 KLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGY 437

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + ++M+EKG   +VVTY  +++GLC+   +  A++L +EM E+G+ P+ 
Sbjct: 438 CKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNV 497

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G CK GN+ +A+ L + M      PD +TY T++D +CK+GEM KA++L   
Sbjct: 498 CTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRI 557

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P  +++ +L+NG+C  G + +  RL   M+ KGI P   + N+++K YC   +
Sbjct: 558 MLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNN 617

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    M ++GV PD+ +YN LI G  +  NM +A+ L  +M  +G      +YN 
Sbjct: 618 MRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNS 677

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GF ++ +  ++  +   M   G   ++  Y   ++ +  + N +      DE +++ 
Sbjct: 678 LIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKC 737

Query: 481 FV 482
            V
Sbjct: 738 LV 739



 Score =  318 bits (814), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 159/474 (33%), Positives = 277/474 (58%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           I +A     E  + GV  +TV+YN +++  C+ G ++EA  L+  M  +G  P V +Y+ 
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +++G C+  +  +  ++++E+ + GL P+  TYN+++   C+   + EAE++   M  + 
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + PD V ++TLI  F ++G +      F EMK   +VPD V YT +I+G C+ G V+EA 
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+  EML KG   D VTY  +++G C+A  + EA  L N+M+E+G+ P+  T+T L+ G 
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK G ++ A  L   M++K ++P++ TYN LI+G CKVG +E+A KL  +M      P+ 
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           I+Y  +++ YC MG + +A  L   M+ KG++PT+V+ N ++ G+C SG     +  +  
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ +G+ P++ ++N+L+  +    NM     +   M  QG+VPD  TYN+++ G C+   
Sbjct: 593 MLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARN 652

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M ++  +   M+EKG +   ++Y +LI G   +   +EA +  +EM   GF+ +
Sbjct: 653 MKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAE 706



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 255/461 (55%), Gaps = 3/461 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR- 83
           G +P  + ++         G L EA +L + +   G+   V + N  +  L       R 
Sbjct: 178 GAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRT 235

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A  V  E  ++G+  +T +YN +L   C+   + EA  +  +M  RG  PD+VS+S ++ 
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            + +  QL + L    E++  GL P+   Y  II+  C+ G V+EA ++   M  +    
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D V Y T+++G  ++  ++    LF+EM  + + PDF T+T++IHG C+ G + +A  LF
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M  K +KPD VTY  LIDG+CK GEM++A  L   M+ + ++PN ++Y  L++G C  
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G V  A  L +EM  KG++P + + N +I G C+ G+  +A + + +M   G  PD+I+Y
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            T+++ + +   M KA  L+  M ++GL P ++T+NV++ GFC  G + D E ++  M++
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           KG+ P+ +T+ +L+  +  +NN++     +  M  +G VPD
Sbjct: 596 KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPD 636


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  318 bits (815), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 163/484 (33%), Positives = 270/484 (55%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC+   +  +   L ++ ++G+  +  T N  I   C +G LEEA  L+  M G  
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAY 275

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+L+ GLCK  +   A + L  M+  G  PD  TYNT++   C+   + EA 
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +   +G  PD V++ +LI      G ++RAL  F E ++  L PD V+Y  ++ G 
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +L AL++ +EM+E+GC  D+ TYN I+NGLC+   +++A  + N+ + +G  PD 
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF TLI G+CK   ++ AL L + M    I PD++TYN++++G CK G+ ++ N+ + +
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEE 515

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +   PN I+Y ILI  +C +  + EA  +   M   G+ P  VS NT+I G+CR+GD
Sbjct: 516 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGD 575

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     K+  +G    + ++N LI  +  + NM  A  +  +M ++G  PD+ TY +
Sbjct: 576 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRI 635

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+   +  +   L  MI KG  P  +T+  ++N     + + EA      M++ G
Sbjct: 636 LVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMG 695

Query: 481 FVPD 484
            VP+
Sbjct: 696 VVPE 699



 Score =  306 bits (784), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/474 (33%), Positives = 265/474 (55%), Gaps = 1/474 (0%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLI 72
           +A+    EM  + V+PD  T+N +++A C++G + E+  L+  +  +G+    FT N  I
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253

Query: 73  NGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA 132
            GLC+ GR + A  +++ M    ++PD  TYNTL+   C+   + EA +    M  +G  
Sbjct: 254 RGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
           PD  +++T+I  + ++G L  A    ++    G VPD V Y  +ING C  G +  AL++
Sbjct: 313 PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALEL 372

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
            +E   K    D+V YN+++ GLCR  ++  A  + NEM+E G  PD +T+  +I+G CK
Sbjct: 373 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK 432

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            GN++ A  + +    K   PD+ T+NTLIDG+CK  +++ A +L   M +  I+P+ I+
Sbjct: 433 MGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVIT 492

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y  ++NG C  G   E    + EM+ KG +P  ++ N +I+ +C+     +A   + +M 
Sbjct: 493 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMC 552

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            +G+ PD++S+NTLI+GF R  ++D A+ L  K++ +G      T+N+++  +  +  M 
Sbjct: 553 QDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQ 612

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            +E I   MI KG  PD  TY  L++G     N+  A+    EM+ +GFVP  A
Sbjct: 613 MAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMA 666



 Score =  291 bits (744), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 271/518 (52%), Gaps = 34/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL      D A      M   GV PD  T+   + ++C  G    A +L+ S+S +G
Sbjct: 112 IMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERG 171

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                  Y +++ GL   G    A+ + DEML   + PD AT+N +L   C+K ++ E+ 
Sbjct: 172 CDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESG 231

Query: 121 EIFCEMSRRG----------------------------------VAPDIVSFSTLIGIFS 146
            +  ++ +RG                                  VAPD+V+++TL+    
Sbjct: 232 ALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLC 291

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           ++ ++  A  Y   M + G +PD+  Y  II+GYC++G + EA ++  + + KG V D V
Sbjct: 292 KDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRV 351

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TY +++NGLC    +  A +LFNE   + + PD   + +L+ G C+ G +  AL + + M
Sbjct: 352 TYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 411

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++   PDI TYN +I+G CK+G +  A  +  D I +   P+  ++  LI+GYC    +
Sbjct: 412 VEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKL 471

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A +L   M   GI P +++ N+++ G C++G A + +E   +M+ +G  P++I+YN L
Sbjct: 472 DSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 531

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I  F +   +++A  ++ +M   GLVPD +++N ++ GFCR G +  + L+  ++ EKG 
Sbjct: 532 IENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGY 591

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +    T+  LI  + S+ N++ A +   EM+ +G+ PD
Sbjct: 592 SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 629



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 137/416 (32%), Positives = 228/416 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCKD K+  A  +L  M  +G  PD  TYNT+I+ YC+ G L+EA +L+     KG
Sbjct: 286 LMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKG 345

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY SLINGLC +G  +RA E+ +E     L PD   YN+L+   CR+  +  A 
Sbjct: 346 FVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 405

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G  PDI +++ +I    + G +  A +   +    G +PD   +  +I+GY
Sbjct: 406 QVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGY 465

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  AL++ + M   G   DV+TYN++LNGLC+A    E ++ F EM+ +G  P+ 
Sbjct: 466 CKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 525

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   CK   + +A  +   M Q  + PD V++NTLI GFC+ G+++ A  L+  
Sbjct: 526 ITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQK 585

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  S    ++ ILI  Y S  ++  A +++ EM+ KG KP L +   ++ G C++ +
Sbjct: 586 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAAN 645

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
             +A   L++M+S+G  P   ++  ++N       + +A A++  M   G+VP+V+
Sbjct: 646 VDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 223/526 (42%), Gaps = 76/526 (14%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNS----MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
            Y  LI      G L++    + S    ++   L+P    Y + I    + GR   A + 
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQP---LYVASIQAYARAGRLRAAVDA 93

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            + M      P    YN ++          +A +++  M   GVAPD  + +  +  F  
Sbjct: 94  FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCL 153

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+   AL   R +   G       Y  ++ G   +G    A  + DEML +    DV T
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVAT 213

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERG-------------------------------- 235
           +N +L+ LC+   + E+  L  ++L+RG                                
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG 273

Query: 236 --VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
             V PD  T+ TL+ G CKD  + +A      M  +   PD  TYNT+IDG+CK G +++
Sbjct: 274 AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQE 333

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A +L  D + +   P+ ++Y  LING C+ G +  A  L+ E   K +KP LV  N+++K
Sbjct: 334 ATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVK 393

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISY------------------------------ 383
           G CR G    A + +++MV EG  PD  +Y                              
Sbjct: 394 GLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLP 453

Query: 384 -----NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
                NTLI+G+ +   +D A  LV +M   G+ PDVITYN +L G C+ G+  +     
Sbjct: 454 DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETF 513

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             MI KG  P+  TY  LI      N L+EA      M Q G VPD
Sbjct: 514 EEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPD 559



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 171/362 (47%), Gaps = 4/362 (1%)

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV--LYTIIINGYCR 182
           E S    A  I ++  LI      G+LD         +S  L PD++  LY   I  Y R
Sbjct: 25  EPSSELTASTIPAYRALIRELVSAGRLDDVDAALASARS-HLAPDSLQPLYVASIQAYAR 83

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G +  A+   + M    C      YN I++ L  A    +A  ++  ML  GV PD  T
Sbjct: 84  AGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDART 143

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
            T  +   C  G  + AL L   ++++        Y T++ G    G    A  L+ +M+
Sbjct: 144 HTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEML 203

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
            R + P+  ++  +++  C  G V E+  L  +++ +G+     +CN  I+G C  G   
Sbjct: 204 GRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLE 263

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +A   + +M    V PD ++YNTL+ G  ++  + +A   + +M NQG +PD  TYN I+
Sbjct: 264 EAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTII 322

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G+C+ G + ++  +L   + KG  PDR TY +LING  ++ +++ A    +E   +   
Sbjct: 323 DGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLK 382

Query: 483 PD 484
           PD
Sbjct: 383 PD 384



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%)

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I+ Y R+G    A +   +M      P + +YN +++  V     D+A  +  +M   G+
Sbjct: 78  IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            PD  T+ V L  FC  GR H +  +L  + E+G +   + Y T++ G  +  +   A  
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197

Query: 472 FHDEMLQRGFVPDDA 486
             DEML R   PD A
Sbjct: 198 LFDEMLGRDVFPDVA 212


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  318 bits (814), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 162/488 (33%), Positives = 276/488 (56%), Gaps = 2/488 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKG-VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
            ++  LC   K+DSA     EME+ G   PD  TY+T++++  + G +++A +L+  M  K
Sbjct: 918  VIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSK 977

Query: 60   GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            G  P V TY+SL++GLCK G+ D A  +L  M + G SP+  TYNT++   C+   + EA
Sbjct: 978  GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 1037

Query: 120  EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
              +  EM   G  P++V+++ L+  F + G+ + A+     M   G VP+   Y  +++ 
Sbjct: 1038 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 1097

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            +C+   V  A ++   M++KGCV +VV+YNT++ GLC+A  + E   L  +ML     PD
Sbjct: 1098 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 1157

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              TF T+I   CK   ++ A  LF+++ +    P++VTYN+L+ G CK    ++A  L  
Sbjct: 1158 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 1217

Query: 300  DMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  ++  SP+ I+Y  +I+G C    V  A++L+ +M+  G+ P  V+ + +I   C+ 
Sbjct: 1218 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 1277

Query: 359  GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
                +A+  L  M+  G DP +I+Y TLI+GF +  N+DKA  ++  + ++G  PDV+T+
Sbjct: 1278 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 1337

Query: 419  NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            ++ +    ++GR+  +  +L  M+  GL PD  TY TL+ G    +  ++A    + M Q
Sbjct: 1338 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQ 1397

Query: 479  RGFVPDDA 486
             G  PD+A
Sbjct: 1398 CGCEPDNA 1405



 Score =  314 bits (804), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 163/483 (33%), Positives = 272/483 (56%), Gaps = 2/483 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V++L K  K+D A   + +M  KG  P+ VTY++L++  C+ G L+EA  L+  M+  G
Sbjct: 954  IVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 1013

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P + TYN++I+G CK GR D A  +L+EM+  G  P+  TY  LL   C+     +A 
Sbjct: 1014 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAI 1073

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +   M  +G  P++ ++++L+ +F +  +++RA      M   G VP+ V Y  +I G 
Sbjct: 1074 GLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGL 1133

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+   V E + + ++ML   CV D+VT+NTI++ +C+   +  A +LFN + E G  P+ 
Sbjct: 1134 CKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNL 1193

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKS-IKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ +L+HG CK    ++A  L   MT+K    PDI+TYNT+IDG CK   +++A KL+ 
Sbjct: 1194 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 1253

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             M+S  ++P+ ++Y I+I+  C    + EA  +   M+  G  P  ++  T+I G+C++G
Sbjct: 1254 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 1313

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            +  KA E L  ++S+G  PD ++++  I+   +   + +A  L+  M   GLVPD +TYN
Sbjct: 1314 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYN 1373

Query: 420  VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF-RFHDEMLQ 478
             +L GFC      D+  +   M + G  PD +TYTTL+   V + + K+        M+ 
Sbjct: 1374 TLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVD 1433

Query: 479  RGF 481
             GF
Sbjct: 1434 TGF 1436



 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/476 (31%), Positives = 262/476 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N L K  ++D A   L EM   G  P+  +YNT+++ +C+   +E A  L+  M  +G
Sbjct: 236 MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRG 295

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V +Y ++INGLCK  + D A  V+D+M+Q G  P+  TY TL+   CR  ++  A 
Sbjct: 296 CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAV 355

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M+ RG  P+ ++++ ++ +F R   ++RA    + M   G  PD + Y+ II+G+
Sbjct: 356 ELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGF 415

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + ++M+ +GC  DV   +T+++ LC+A  +  A +L    +     PD 
Sbjct: 416 CKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDV 475

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++ LIH  CK   + +A +  D+M +    PD+VTYN+++DG CK   +  A  L+  
Sbjct: 476 VAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDR 535

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  + P+ ++Y I+I+ +C   ++  AF++   M      P +V+ + +I G C++G 
Sbjct: 536 MRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGT 595

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +   +M+  G  P+ ++YNTLI+G  +   +++A  ++  M  Q   PD ITY  
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           ++ G C   R+ ++  +L  M +KG  PDR TY TL+      NNL+   +   EM
Sbjct: 656 LINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711



 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 264/485 (54%), Gaps = 3/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +   A +   EM  K   PD+VTYNT+IN   +   L++A +L+  M   G
Sbjct: 202 ILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 260

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VF+YN++++G CK  R + A  +L++M+  G  PD  +Y T++   C+ + + EA 
Sbjct: 261 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEAC 320

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +RG  P+++++ TL+  F R G LD A+   R+M   G  P+ + Y  I++ +
Sbjct: 321 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVF 380

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   +  A ++   M++ GC  D + Y+TI++G C+A  L EA DL  +M+ RG  PD 
Sbjct: 381 CRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDV 440

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
              +TLI   CK   ++ A  L  +       PD+V Y+ LI   CK   + +A   W D
Sbjct: 441 ACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAES-WLD 499

Query: 301 -MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+  +  P+ ++Y  +++G C    + +AF L+  M   G+ P +V+ + +I  +C+  
Sbjct: 500 VMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDN 559

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +   A + L +M      PD ++Y+ LING  +   +DKAF +  +M   G  P+++TYN
Sbjct: 560 NLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYN 619

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+  ++  +  +L  M ++   PD  TYT LING  + + L+EA+R   EM  +
Sbjct: 620 TLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDK 679

Query: 480 GFVPD 484
           G +PD
Sbjct: 680 GCLPD 684



 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/486 (32%), Positives = 265/486 (54%), Gaps = 5/486 (1%)

Query: 1   MVNALCKDHKIDSAK-MFLCEME-QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++N L K H+   A  +F   +E Q G   DTVTY+TLI+ + R G +  A++L + M+ 
Sbjct: 132 LLNVLVKAHQYSQAHDLFRSRIEGQWG--GDTVTYSTLISGFIRAGKILPAYELFDEMNR 189

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           KGLK     + S++ GLC  G+C  A     EM +    PD+ TYNT++    + + + +
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDD 248

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  EM   G AP++ S++T++  F +  +++ AL    +M + G  PD V YT +IN
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C+   V EA ++ D+M+++GC  +V+TY T+++G CR   L  A +L  +M ERG  P
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 368

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  T+  ++H  C+  +M +A  +  +M Q    PD + Y+T+I GFCK G++ +A+ L 
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             MI R   P+      LI+  C    +  A  L    +G    P +V+ + +I   C++
Sbjct: 429 EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKA 488

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               +A+ +L  MV     PD ++YN++++G  +   ++ AF L  +M   G++PDV+TY
Sbjct: 489 KRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTY 548

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++++  FC+   +  +  +L RM E    PD  TY+ LING      + +AF    EML 
Sbjct: 549 SIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLG 608

Query: 479 RGFVPD 484
            G  P+
Sbjct: 609 CGCAPN 614



 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 252/459 (54%), Gaps = 2/459 (0%)

Query: 28   PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
            P+  T+  LI+  CR G +  A++L+  M   G+   V  +N +I GLC   + D A E+
Sbjct: 875  PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934

Query: 88   LDEMLQMG-LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
              EM + G   PD  TY+T++    +   + +A  +  +M  +G +P++V++S+L+    
Sbjct: 935  FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994

Query: 147  RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
            + G+LD A    + M  +G  P+ V Y  II+G+C+ G + EA  + +EM++ GC  +VV
Sbjct: 995  KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054

Query: 207  TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            TY  +L+  C+     +A  L   M+E+G  P+ +T+ +L+   CK   + +A  L   M
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 267  TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             QK   P++V+YNT+I G CK  ++ +   L   M+S    P+ +++  +I+  C    V
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 327  TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDSISYNT 385
              A+ L+  +   G  P LV+ N+++ G C+S    +A+  L +M   +G  PD I+YNT
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234

Query: 386  LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
            +I+G  + + +D+A+ L  +M + GL PD +TY+++++  C+   M ++  +L  M++ G
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294

Query: 446  LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +P   TY TLI+G     NL +A      +L +G  PD
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 1333



 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 133/407 (32%), Positives = 228/407 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  ++D A   + +M Q+G  P+ +TY TL++ +CR G L+ A +L+  M+ +G
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TYN++++  C++   +RA +VL  M+Q G  PD   Y+T++   C+   + EA 
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M RRG  PD+   STLI    +   +D A    R        PD V Y+I+I+  
Sbjct: 426 DLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHAL 485

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA    D M++  C  DVVTYN++++GLC+++ + +A  LF+ M   GV PD 
Sbjct: 486 CKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDV 545

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ +IH  CKD N++ A  + + M +    PD+VTY+ LI+G CK G ++KA  ++ +
Sbjct: 546 VTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQE 605

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+    +PN ++Y  LI+G C +  V +A  +   M  +   P  ++   +I G C +  
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASR 665

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
             +A   L +M  +G  PD ++Y TL+    +  N++    L+ +ME
Sbjct: 666 LEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 235/433 (54%), Gaps = 4/433 (0%)

Query: 55   SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
            + S +G     +T N L+  L +  R   A +V     ++  SP+  T+  L+   CR  
Sbjct: 834  ATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAG 891

Query: 115  NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL-Y 173
            ++  A E+  EM R GV  +++  + +I       +LD AL  F+EM+ +G  P +V  Y
Sbjct: 892  DIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTY 951

Query: 174  TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            + I++   ++G V +A ++ ++M+ KGC  +VVTY+++L+GLC+A  L EA  L   M  
Sbjct: 952  STIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 1011

Query: 234  RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
             G  P+  T+ T+I GHCK G +++A +L + M     +P++VTY  L+D FCK G+ E 
Sbjct: 1012 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 1071

Query: 294  ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
            A  L   M+ +   PN  +Y  L++ +C    V  A +L   M+ KG  P +VS NT+I 
Sbjct: 1072 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIA 1131

Query: 354  GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
            G C++    +    L +M+S    PD +++NT+I+   +   +D A+ L + ++  G  P
Sbjct: 1132 GLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 1191

Query: 414  DVITYNVILTGFCRQGRMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            +++TYN ++ G C+  R   +E +L  M  K G +PD  TY T+I+G      +  A++ 
Sbjct: 1192 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 1251

Query: 473  HDEMLQRGFVPDD 485
              +ML  G  PDD
Sbjct: 1252 FLQMLSDGLAPDD 1264



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 241/459 (52%), Gaps = 34/459 (7%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +  +F  N L+N L K  +  +A ++    ++     DT TY+TL+    R   +  A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 120 EEIFCEMSRRGV----------------------------------APDIVSFSTLIGIF 145
            E+F EM+R+G+                                   PD V+++T+I   
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGL 240

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S++ +LD A+    EM   G  P+   Y  +++G+C+   V  AL + ++M+ +GC  DV
Sbjct: 241 SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDV 300

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V+Y T++NGLC+   + EA  + ++M++RG  P+  T+ TL+ G C+ G+++ A+ L   
Sbjct: 301 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 360

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           MT++  +P+ +TYN ++  FC+  +ME+A+++   MI     P+ I+Y  +I+G+C  G 
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK 420

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA  L  +M+ +G +P +   +T+I   C++     A E L   +     PD ++Y+ 
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+   + + + +A + +  M      PDV+TYN ++ G C+  R++D+ L+  RM   G
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAG 540

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + PD  TY+ +I+     NNL  AF+  + M +   VPD
Sbjct: 541 VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 241/506 (47%), Gaps = 26/506 (5%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++++ CKD+ +DSA   L  M++    PD VTY+ LIN  C+ G +++AF +   M G G
Sbjct: 551  VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P + TYN+LI+GLCK  + ++A E+L+ M +   +PD+ TY  L+   C    + EA 
Sbjct: 611  CAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAW 670

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV----LYTII 176
             +  EM  +G  PD +++ TL+    +   L+      +EM++      N     L+  +
Sbjct: 671  RVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFV 730

Query: 177  ING-------------YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
            I G                   VL++   + +   +     V    T   G    K++  
Sbjct: 731  IRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRVTAVAT--QGGFHHKIVRI 788

Query: 224  ADDLFNEMLERGVFPDFY-TFTTLIHGHCKDG--NMNKALNLFDIMT-QKSIKPDIVTYN 279
             +  F           F    TT + G    G  N + AL  FD  T Q+    D  T N
Sbjct: 789  LNSRFAWEYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCN 848

Query: 280  TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
             L+    ++   + A +++ + +    SPN  ++ ILI+G C  G +  A+ L  EM   
Sbjct: 849  CLLQALLRLKRPKDALQVYRNKLC--CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRH 906

Query: 340  GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDK 398
            G+   ++  N +IKG C +     A E   +M   G   PD  +Y+T+++  V+   +D 
Sbjct: 907  GVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 966

Query: 399  AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
            A  LV  M ++G  P+V+TY+ +L G C+ G++ ++  +L RM   G +P+  TY T+I+
Sbjct: 967  ACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 1026

Query: 459  GHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GH     + EA+   +EM+  G  P+
Sbjct: 1027 GHCKLGRIDEAYHLLEEMVDGGCQPN 1052



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 257/509 (50%), Gaps = 52/509 (10%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++A CK  K + A   +  M +KG  P+  TYN+L++ +C++  +E A QL++SM  KG
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P V +YN++I GLCK  +      +L++ML     PD  T+NT++   C+   +  A 
Sbjct: 1119 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 1178

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
            E+F  +   G  P++V++++L+    ++ + D+A    REM +  G  PD + Y  +I+G
Sbjct: 1179 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 1238

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             C++  V  A K+  +ML  G   D VTY+ +++ LC+ + + EA+++   ML+ G  P 
Sbjct: 1239 LCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPG 1298

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              T+ TLI G CK GN++KAL +  ++  K   PD+VT++  ID   K G + +A +L  
Sbjct: 1299 AITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLE 1358

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII------- 352
             M+   + P+ ++Y  L+ G+C      +A  L+  M   G +P   +  T++       
Sbjct: 1359 TMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKK 1418

Query: 353  ----------KGYCRSG-----------DAS---KADEFL----------------SKMV 372
                      K    +G           +AS   +AD  L                ++ V
Sbjct: 1419 SYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKV 1478

Query: 373  SEGVDPDSIS-YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
             EG+D  ++  ++ ++  +V  +  ++AF L   M  +G+ PD +T+  +LT  C  G +
Sbjct: 1479 FEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLL 1538

Query: 432  HDSELILWRMIEK--GLNPDRSTYTTLIN 458
             D+ +  +  I +  GL P    ++ +I+
Sbjct: 1539 -DAAVDEFVSISRDYGLEPGVDHFSCVID 1566



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 183/333 (54%), Gaps = 1/333 (0%)

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           +R G   +I   + L+ +  +  Q  +A   FR         D V Y+ +I+G+ R G +
Sbjct: 118 TRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKI 177

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
           L A ++ DEM  KG       + +IL GLC A   ++A   F EM  +   PD  T+ T+
Sbjct: 178 LPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTM 236

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I+G  K   ++ A+ L + M      P++ +YNT++ GFCK   +E A  L   M++R  
Sbjct: 237 INGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGC 296

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ +SY  +ING C +  V EA R+  +M+ +G +P +++  T++ G+CR GD   A E
Sbjct: 297 PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVE 356

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            + KM   G  P++I+YN +++ F R  +M++A  ++  M   G  PD I Y+ I++GFC
Sbjct: 357 LVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFC 416

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           + G++ ++  +L +MI +G  PD +  +TLI+ 
Sbjct: 417 KAGKLREAHDLLEQMIRRGCRPDVACLSTLIDA 449



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 101/283 (35%), Positives = 158/283 (55%), Gaps = 1/283 (0%)

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D VTY+T+++G  RA  +  A +LF+EM  +G+        +++ G C  G  + A+  F
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF 219

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M+ K+  PD VTYNT+I+G  K   ++ A +L  +M+    +PN  SY  +++G+C  
Sbjct: 220 REMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             V  A  L  +MV +G  P +VS  T+I G C+     +A   + KM+  G  P+ I+Y
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 338

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            TL++GF R  ++D A  LV KM  +G  P+ ITYN I+  FCR+  M  +  +L  MI+
Sbjct: 339 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ 398

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            G  PD   Y+T+I+G      L+EA    ++M++RG  PD A
Sbjct: 399 TGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVA 441



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 201/443 (45%), Gaps = 61/443 (13%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
            +V+ LCK  + D A+  L EM +K G  PD +TYNT+I+  C+   ++ A++L   M   
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 1258

Query: 60   GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            GL P   TY+ +I+ LCK    D A  VL+ ML+ G  P   TY TL+   C+  N+ +A
Sbjct: 1259 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 1318

Query: 120  EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             EI   +  +G  PD+V+FS  I   S+ G+L +A      M  AGLVPD V Y  ++ G
Sbjct: 1319 LEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 1378

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC----------------------- 216
            +C      +A+ + + M + GC  D  TY T++  L                        
Sbjct: 1379 FCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKL 1438

Query: 217  --------RAKMLTEAD--------DLFNE----MLERGVFP-----DFYTFTTLIHGHC 251
                     A +  EAD        D+F +       R VF      +   ++ ++  + 
Sbjct: 1439 NHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYV 1498

Query: 252  KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK--ISPN 309
                  +A  L+ +M  + ++PD VT+ +L+   C  G ++ A   +   ISR   + P 
Sbjct: 1499 FHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVS-ISRDYGLEPG 1557

Query: 310  YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
               +  +I+    +G V EA  L   M+G   KP+  + N ++  Y   GD  +A     
Sbjct: 1558 VDHFSCVIDLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERALR--- 1611

Query: 370  KMVSEGVDPDSISYNTLINGFVR 392
              V+E ++P   SY  L N + +
Sbjct: 1612 --VAE-LNPTQASYLLLSNMYAQ 1631


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  318 bits (814), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 170/521 (32%), Positives = 285/521 (54%), Gaps = 38/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAY-------------------- 40
           +++ LCK   ++ A+    EM   G+ PD  TYN LI  Y                    
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKEN 437

Query: 41  ---------------CREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                          C  G L  A +L   M   GLKP +  Y +++ GL K+GR + A 
Sbjct: 438 LTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAI 497

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++L  M   GLSPD   YNT+++  C+   M E +    EM  +G+ P++ ++   I  +
Sbjct: 498 KILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGY 557

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G++  A   F EM  +G+ P++V+ T +I+GYC++G   +A      ML++G + DV
Sbjct: 558 CRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDV 617

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T++ +++GL +   L EA  +F+E+L++G+ PD +T+T+LI   CK+G++  A  L D 
Sbjct: 618 QTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDD 677

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +K I P+IVTYN LI+G CK+GE+ KA +L+  +  + ++ N ++Y  +I GYC   +
Sbjct: 678 MCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSAN 737

Query: 326 VTEAFRLWYEMVGKGIKP-TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           +TEAF+L++ M   G+ P + V C  +I G C++G+  KA      MV EG+   + ++N
Sbjct: 738 LTEAFQLFHGMKLVGVPPDSFVYC-ALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFN 795

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI+GF +   + +A+ LV  M +  + P+ +TY +++   C  G + ++E +   M ++
Sbjct: 796 ALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKR 855

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            + P+  TYT+L++G+       E F   DEM+ RG  PDD
Sbjct: 856 NVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDD 896



 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 161/482 (33%), Positives = 269/482 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C+  K++  K  L +ME+KG  P+ VTY+ +I   CR G ++EA +L  SM+ KG
Sbjct: 238 LINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKG 297

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  + Y +LI+G C++ R    K +LDEM  MGL PD   Y  L+    ++ ++  A 
Sbjct: 298 LLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAF 357

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  R +  +  ++  LI    + G L++A   F EM   G+ PD   Y  +I GY
Sbjct: 358 QVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGY 417

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + +A ++  E+ ++    +      I+NGLC    LT A++LF EM+  G+ P+ 
Sbjct: 418 YKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNI 477

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TT++ G  K+G   +A+ +  +M  + + PD+  YNT+I GFCK G+ME+      +
Sbjct: 478 VIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVE 537

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI++ + PN  +YG  I+GYC  G +  A R + EM+  GI P  V C  +I GYC+ G+
Sbjct: 538 MIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGN 597

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA      M+ +GV PD  +++ LI+G  +   + +A  + S++ ++GLVPDV TY  
Sbjct: 598 TTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTS 657

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++  C++G +  +  +   M +KG+NP+  TY  LING      + +A    D + ++G
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717

Query: 481 FV 482
             
Sbjct: 718 LA 719



 Score =  291 bits (744), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 156/480 (32%), Positives = 268/480 (55%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  L K+ + + A   L  M+ +G+ PD   YNT+I  +C+ G +EE    +  M  KG
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKG 542

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP V+TY + I+G C+ G    A+    EML  G++P+      L+   C+  N ++A 
Sbjct: 543 LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAF 602

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M  +GV PD+ + S LI   S+NG+L  A+  F E+   GLVPD   YT +I+  
Sbjct: 603 AKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNL 662

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++ D+M +KG   ++VTYN ++NGLC+   + +A +LF+ + E+G+  + 
Sbjct: 663 CKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNS 722

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++T+I G+CK  N+ +A  LF  M    + PD   Y  LIDG CK G  EKA  L+  
Sbjct: 723 VTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLG 782

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   I+    ++  LI+G+  +G + EA++L  +MV   I P  V+   +I+ +C  G+
Sbjct: 783 MVEEGIASTP-AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGN 841

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A++   +M    V P+ ++Y +L++G+ R     + F+L  +M  +G+ PD + ++V
Sbjct: 842 IKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSV 901

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++G    +  ++  M+ +G+N  ++ YT LI+     NNL E  +  DE+ ++G
Sbjct: 902 MVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQG 961



 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 166/553 (30%), Positives = 273/553 (49%), Gaps = 69/553 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+  +    K  L EM   G+ PD V Y  LIN + ++  +  AFQ+   M  + 
Sbjct: 308 LIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARK 367

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL-------------- 106
           +K   FTY +LI+GLCK G  ++A+++  EM  MG+ PD  TYN L              
Sbjct: 368 IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAY 427

Query: 107 -LVESCRKEN--------------------MSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            L+   +KEN                    ++ A E+F EM   G+ P+IV ++T++   
Sbjct: 428 ELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGL 487

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G+ + A+     MK  GL PD   Y  +I G+C+ G + E      EM+ KG   +V
Sbjct: 488 VKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNV 547

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TY   ++G CRA  +  A+  F EML+ G+ P+    T LI G+CKDGN  KA   F  
Sbjct: 548 YTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRC 607

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  + + PD+ T++ LI G  K G++++A  ++++++ + + P+  +Y  LI+  C  G 
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  AF L  +M  KGI P +V+ N +I G C+ G+ +KA E    +  +G+  +S++Y+T
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I G+ +  N+ +AF L   M+  G+ PD   Y  ++ G C+ G    +  +   M+E+G
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787

Query: 446 ----------------------------------LNPDRSTYTTLINGHVSQNNLKEAFR 471
                                             + P+  TYT LI  H +  N+KEA +
Sbjct: 788 IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847

Query: 472 FHDEMLQRGFVPD 484
              EM +R  +P+
Sbjct: 848 LFMEMQKRNVMPN 860



 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 158/521 (30%), Positives = 262/521 (50%), Gaps = 69/521 (13%)

Query: 33  YNTLINAYCREGFLEEAFQLM---------------NSMSGKGLK--------------- 62
           +  LI+ Y ++GFL EA  +                NS+S   LK               
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 63  ----PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
               P V+TY +LIN  C+ G+ +  K VL +M + G  P+  TY+ ++   CR  ++ E
Sbjct: 226 GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDE 285

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A E+   M+ +G+ PD   ++TLI  F R  +         EM + GL PD+V YT +IN
Sbjct: 286 ALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALIN 345

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+ +   +  A ++++EM  +   ++  TY  +++GLC+   L +A+DLF+EM   G+ P
Sbjct: 346 GFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKP 405

Query: 239 DFYTFTTLIHGH-----------------------------------CKDGNMNKALNLF 263
           D  T+  LI G+                                   C  G++ +A  LF
Sbjct: 406 DIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELF 465

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M    +KP+IV Y T++ G  K G  E+A K+   M  + +SP+   Y  +I G+C  
Sbjct: 466 QEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKA 525

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G + E      EM+ KG+KP + +    I GYCR+G+   A+    +M+  G+ P+ +  
Sbjct: 526 GKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVIC 585

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
             LI+G+ ++ N  KAFA    M +QG++PDV T++V++ G  + G++ ++  +   +++
Sbjct: 586 TDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLD 645

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           KGL PD  TYT+LI+    + +LK AF  HD+M ++G  P+
Sbjct: 646 KGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPN 686



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 211/372 (56%), Gaps = 1/372 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K+ K+  A     E+  KG+ PD  TY +LI+  C+EG L+ AF+L + M  KG
Sbjct: 623 LIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG 682

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TYN+LINGLCK G   +A+E+ D + + GL+ ++ TY+T++   C+  N++EA 
Sbjct: 683 INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAF 742

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   GV PD   +  LI    + G  ++AL  F  M   G +     +  +I+G+
Sbjct: 743 QLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGF 801

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G ++EA ++ ++M++     + VTY  ++   C    + EA+ LF EM +R V P+ 
Sbjct: 802 FKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNV 861

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+L+HG+ + G  ++  +LFD M  + IKPD + ++ ++D   K G   KA KL  D
Sbjct: 862 LTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDD 921

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  ++     Y ILI+  C   +++E  ++  E+  +G K +L +C T++  + R+G 
Sbjct: 922 MLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGR 981

Query: 361 ASKADEFLSKMV 372
             +A   L  MV
Sbjct: 982 TDEALRVLESMV 993


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  317 bits (813), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 159/484 (32%), Positives = 273/484 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K+  A   +    + G  P+T+T++TLIN +C EG + EA  L++ M    
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T N+LINGLC KGR   A  ++D M++ G   +  TY  +L   C+  N + A 
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M  R +   +V +S +I    ++G LD AL  F EM+  G+  D V Y+ II G 
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G   +  KM  EM+ +  + +VVT++ +++   +   L EA +L+NEM+ RG+ PD 
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDT 349

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LI G CK+  + +A  + D+M  K  +P+IVTY+ LI+ +CK   ++   +L+ +
Sbjct: 350 ITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCE 409

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+ +  + ++Y  L+ G+C  G +  A  L+ EMV +G+ P++V+   ++ G C +G+
Sbjct: 410 ISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 469

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E   KM    +      YN +I+G      +D A++L   +  +G+ PDV+TYNV
Sbjct: 470 LQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNV 529

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G + +++++  +M E G  P   TY  LI  H+  + +  +    +EM  RG
Sbjct: 530 MIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRG 589

Query: 481 FVPD 484
           F  D
Sbjct: 590 FAAD 593



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 226/423 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC   ++  A + +  M + G   + +TY  ++N  C+ G    A  L   M  + 
Sbjct: 180 LINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERS 239

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V  Y+ +I+ LCK G  D A  + +EM   G+  D   Y++++   C      +  
Sbjct: 240 IKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGA 299

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  R + P++V+FS LI +F + G+L  A   + EM + G+ PD + Y+ +I+G+
Sbjct: 300 KMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGF 359

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA +M D M+ KGC  ++VTY+ ++N  C+AK +     LF E+  +G+  D 
Sbjct: 360 CKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADT 419

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TL+ G C+ G +N A  LF  M  + + P +VTY  L+DG C  GE++KA +++  
Sbjct: 420 VTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEK 479

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   ++      Y I+I+G C+   V +A+ L+  +  KG+KP +++ N +I G C+ G 
Sbjct: 480 MQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGS 539

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+AD    KM  +G  P   +YN LI   +    +  +  L+ +M+ +G   D  T  +
Sbjct: 540 LSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKM 599

Query: 421 ILT 423
           ++ 
Sbjct: 600 VVV 602



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 231/431 (53%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           + EA  L  SM      P +  ++ L + + ++   D       EM   G+  +  T N 
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   CRK  +  A  +     + G  P+ ++FSTLI  F   G++  A+     M    
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+ V    +ING C  G V EAL + D M++ GC  + +TY  +LN +C++     A 
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           DLF +M ER +      ++ +I   CKDGN++ AL+LF+ M  K IK D+V Y+++I G 
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  G  +   K+  +MI R I PN +++  LI+ +   G + EA  L+ EMV +GI P  
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDT 349

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++ +++I G+C+     +A++ L  MVS+G +P+ ++Y+ LIN + + + +D    L  +
Sbjct: 350 ITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCE 409

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           + ++GLV D +TYN ++ GFC+ G+++ ++ +   M+ +G+ P   TY  L++G      
Sbjct: 410 ISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 469

Query: 466 LKEAFRFHDEM 476
           L++A    ++M
Sbjct: 470 LQKALEIFEKM 480



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 252/513 (49%), Gaps = 35/513 (6%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D K++ A      M Q    P  + ++ L +A  R    +        M   G++  ++T
Sbjct: 47  DIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYT 106

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            N +IN  C+K +   A  V+   L+ G  P+T T++TL+   C +  +SEA  +   M 
Sbjct: 107 MNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMV 166

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
                P++V+ +TLI      G++  AL+    M   G   + + Y  ++N  C++G   
Sbjct: 167 EMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTA 226

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            AL +  +M E+     VV Y+ +++ LC+   L +A  LFNEM  +G+  D   ++++I
Sbjct: 227 LALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSII 286

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G C DG  +    +   M  ++I P++VT++ LID F K G++ +A +L+ +M++R I+
Sbjct: 287 GGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIA 346

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ I+Y  LI+G+C    + EA ++   MV KG +P +V+ + +I  YC++         
Sbjct: 347 PDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRL 406

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             ++ S+G+  D+++YNTL+ GF +   ++ A  L  +M ++G+ P V+TY ++L G C 
Sbjct: 407 FCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCD 466

Query: 428 QG----------RMHDSELIL---------------------WRMI----EKGLNPDRST 452
            G          +M  S +IL                     W +      KG+ PD  T
Sbjct: 467 NGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLT 526

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           Y  +I G   + +L EA     +M + G  P D
Sbjct: 527 YNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSD 559



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 36/191 (18%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMN------ 54
           +V   C+  K++ AK    EM  +GV P  VTY  L++  C  G L++A ++        
Sbjct: 425 LVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSR 484

Query: 55  -----------------------------SMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                                        S+S KG+KP V TYN +I GLCKKG    A 
Sbjct: 485 MILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEAD 544

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  +M + G +P   TYN L+        +  + E+  EM  RG A D  +   ++ + 
Sbjct: 545 MLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML 604

Query: 146 SRNGQLDRALM 156
           S +G+LD+  +
Sbjct: 605 S-DGRLDKTFL 614


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  317 bits (813), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 168/484 (34%), Positives = 272/484 (56%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK   +  A + L ++ Q+G+  +  TYN  I   C  G L EA +L++ M    
Sbjct: 195 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 254

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LI GLCKK     A   L  M+  G  PD  TYNT++   C+   + EA 
Sbjct: 255 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 313

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +   +G  PD V++ +LI      G ++RAL  F E ++ G+ PD V+Y  ++ G 
Sbjct: 314 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 373

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +L AL++ +EM E+GC  D+ TYN ++NGLC+   +++A  + N+ + +G  PD 
Sbjct: 374 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 433

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF TLI G+CK   ++ AL L + M +  I PD +TYN++++G CK G++ + N+ + +
Sbjct: 434 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 493

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +   PN I+Y ILI  +C    + EA ++  +M  +G+ P  VS NT+I G+CR+GD
Sbjct: 494 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 553

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     K+  +G    + ++NTLI  F  + NM  A  +  +M ++G   D  TY V
Sbjct: 554 LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRV 613

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+   +  + + L  MI+KG  P  ST+  +IN     + + +A      M++ G
Sbjct: 614 LIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 673

Query: 481 FVPD 484
            VP+
Sbjct: 674 VVPE 677



 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 244/455 (53%), Gaps = 1/455 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
            V Y T++      G   +A QL + M    + P +  +N +++ LCK+G    A  +L 
Sbjct: 154 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 213

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +++Q G+S +  TYN  +   C    + EA  +   M R    PD+V+++TLI    +  
Sbjct: 214 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKS 272

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
               A+ Y R M + G +PD+  Y  II+GYC+   V EA ++  + + KG V D VTY 
Sbjct: 273 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 332

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           +++NGLC    +  A +LFNE   +G+ PD   + +L+ G C  G +  AL + + M ++
Sbjct: 333 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 392

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
              PDI TYN +I+G CK+G +  A  +  D I +   P+  ++  LI+GYC    +  A
Sbjct: 393 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 452

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            +L   M   GI P  ++ N+++ G C++G  ++ +E   +M+ +G  P+ I+YN LI  
Sbjct: 453 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 512

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           F R   M++A  ++ KM  +GL PD +++N ++ GFCR G +  + L+  ++ EKG +  
Sbjct: 513 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 572

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             T+ TLI     + N+  A +  DEML +G   D
Sbjct: 573 ADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 607



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 232/459 (50%), Gaps = 7/459 (1%)

Query: 28  PDTV--TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           P T+   Y   I AY R G L +A      M      P    YN++++ L      D+A 
Sbjct: 49  PATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAH 108

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +V   ML  G+SPD  T+   L   C       A  +   +  RG     V++ T++   
Sbjct: 109 KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGL 164

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
             +G    A   F +M    + P+   +  +++  C+ G VLEA  +  +++++G  +++
Sbjct: 165 YAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINL 224

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYN  + GLC A  L EA  L + M    V PD  T+ TLI G CK     +A++    
Sbjct: 225 FTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRR 283

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  +   PD  TYNT+IDG+CK+  +++A +L  D + +   P+ ++Y  LING C+ G 
Sbjct: 284 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 343

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V  A  L+ E   KGIKP +V  N+++KG C  G    A + +++M  EG  PD  +YN 
Sbjct: 344 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 403

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +ING  +  N+  A  +++    +G +PDV T+N ++ G+C++ ++  +  ++ RM E G
Sbjct: 404 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 463

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + PD  TY +++NG      + E      EM+ +G  P+
Sbjct: 464 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 502



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 244/471 (51%), Gaps = 6/471 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK      A  +L  M  +G  PD  TYNT+I+ YC+   ++EA +L+     KG
Sbjct: 264 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 323

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY SLINGLC +G  +RA E+ +E    G+ PD   YN+L+   C +  +  A 
Sbjct: 324 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 383

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM+  G  PDI +++ +I    + G +  A +   +    G +PD   +  +I+GY
Sbjct: 384 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 443

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  AL++ + M E G   D +TYN++LNGLC+A  + E ++ F EM+ +G  P+ 
Sbjct: 444 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 503

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   C+   M +A  +   M+Q+ + PD V++NTLI GFC+ G++E A  L+  
Sbjct: 504 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 563

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  S    ++  LI  +    ++  A +++ EM+ KG +    +   +I G C++ +
Sbjct: 564 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 623

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L +M+ +G  P   ++  +IN       + +A  ++  M   G+VP+V+  + 
Sbjct: 624 VDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DT 681

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           IL     +  +   ++++  +++KG +    TY  L  G V  N L    R
Sbjct: 682 ILNA--DKKEIAAPKILVEDLMKKG-HISYPTYEVLHEG-VRDNKLTRKHR 728



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 118/243 (48%), Gaps = 5/243 (2%)

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +   I  + + G +  A++ F+ M   +  P    YN ++D        ++A+K++  M+
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           +  +SP+  ++ I +  +C       A RL   +  +G     V+  T++ G    G   
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 171

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            A +   +M+   V P+  ++N +++   +  ++ +A  L+ K+  +G+  ++ TYN+ +
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G C  GR+ ++  ++  M    + PD  TY TLI G   ++  +EA  +   M+ +G +
Sbjct: 232 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 483 PDD 485
           PDD
Sbjct: 291 PDD 293


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  317 bits (813), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 157/468 (33%), Positives = 270/468 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV PD +TYN++++ YC  G  +EA   +  M   G
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY+SL+N LCK GR   A+++ D M + GL PD ATY TLL     K  + E  
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ PD   F+ LI  +++  ++D+A++ F +M+  GL P+ V Y  +I+  
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A+   ++M+++G   +++ Y ++++GLC      +A++L  EML+RG+  + 
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I  HCK+G + ++  LFD+M +  +KPDI+TYNTLIDG C  G+M++A KL A 
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++YG LINGYC +  + +A  L+ EMV  G+ P +++ N I++G   +  
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    +   G   +  +YN +++G  +    D+A  +   +    L  +  T+N+
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           ++    + GRM +++ +       GL PD  TY+ +    + Q +L+E
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE 709



 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/558 (29%), Positives = 268/558 (48%), Gaps = 74/558 (13%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC D +  D+  + L  M + G  PD  +YN L+   C E   +EA +L++ M+  
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 58  -GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            G G  P V +YN+++NG  K+G  D+A     EML  G+ PD  TY++++   C+ + M
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A E+   M + GV PD +++++++  +  +GQ   A+   ++M+S G+ P+ V Y+ +
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           +N  C+NG   EA K+ D M ++G   D+ TY T+L G      L E   L + M+  G+
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD + F  LI  + K   +++A+ +F  M Q  + P++V Y T+ID  CK G ++ A  
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 297 LWADMISRKISPNYISYGILING-----------------------------------YC 321
            +  MI   ++PN I Y  LI+G                                   +C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G V E+ +L+  MV  G+KP +++ NT+I G C +G   +A + L+ MVS GV PD +
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL------------------- 422
           +Y TLING+ R   MD A AL  +M + G+ P++ITYN+IL                   
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612

Query: 423 ----------------TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
                            G C+     ++  +   +    L  +  T+  +I   +    +
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672

Query: 467 KEAFRFHDEMLQRGFVPD 484
            EA          G VPD
Sbjct: 673 DEAKDLFAAHSANGLVPD 690



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 264/488 (54%), Gaps = 4/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++   C+  ++D     L  + +KG   D +T+  L+   C +    +A  + +  M+  
Sbjct: 98  LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ---MGLSPDTATYNTLLVESCRKENM 116
           G  P VF+YN+L+ GLC + R   A E+L  M      G  PD  +YNT+L    ++ + 
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDS 217

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A   + EM  RG+ PD+V++S++I    +   +D+A+     M   G++PD + Y  I
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++GYC +G   EA+    +M   G   +VVTY++++N LC+    TEA  +F+ M +RG+
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD  T+ TL+ G+   G + +   L D+M +  I+PD   +N LI  + K  ++++A  
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +++ M    ++PN + YG +I+  C  G V +A   + +M+ +G+ P ++   ++I G C
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
                 KA+E + +M+  G+  ++I +N++I+   +E  + ++  L   M   G+ PD+I
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 517

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN ++ G C  G+M ++  +L  M+  G+ PD  TY TLING+   + + +A     EM
Sbjct: 518 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577

Query: 477 LQRGFVPD 484
           +  G  P+
Sbjct: 578 VSSGVSPN 585



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/463 (32%), Positives = 247/463 (53%), Gaps = 4/463 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P   TY  LI   CR G L+  F  + ++  KG +    T+  L+ GLC   R   A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR---GVAPDIVSFSTL 141
           + VL  M ++G  PD  +YN LL   C +    EA E+   M+     G  PD+VS++T+
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           +  F + G  D+A   + EM   G++PD V Y+ II   C+   + +A+++ + M++ G 
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + D +TYN+IL+G C +    EA     +M   GV P+  T+++L++  CK+G   +A  
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +FD MT++ ++PDI TY TL+ G+   G + + + L   M+   I P++  + ILI  Y 
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
               V +A  ++ +M   G+ P +V   T+I   C+SG    A  +  +M+ EG+ P+ I
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            Y +LI+G    +  DKA  L+ +M ++G+  + I +N I+   C++GR+ +SE +   M
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  G+ PD  TY TLI+G      + EA +    M+  G  PD
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 214/445 (48%), Gaps = 40/445 (8%)

Query: 49  AFQLMNSMSGKG---LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           A    N M+  G   + P V TY  LI   C+ GR D     L  +++ G   D  T+  
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           LL   C  +  S+A +I                                    R M   G
Sbjct: 133 LLKGLCADKRTSDAMDIV----------------------------------LRRMTELG 158

Query: 166 LVPDNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
            +PD   Y  ++ G C   R+   LE L M  +    G   DVV+YNT+LNG  +     
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           +A   ++EML+RG+ PD  T++++I   CK   M+KA+ + + M +  + PD +TYN+++
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            G+C  G+ ++A      M S  + PN ++Y  L+N  C  G  TEA +++  M  +G++
Sbjct: 279 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE 338

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P + +  T+++GY   G   +    L  MV  G+ PD   +N LI  + ++E +D+A  +
Sbjct: 339 PDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 398

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
            SKM   GL P+V+ Y  ++   C+ G + D+ L   +MI++GL P+   YT+LI+G  +
Sbjct: 399 FSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCT 458

Query: 463 QNNLKEAFRFHDEMLQRGFVPDDAF 487
            +   +A     EML RG   +  F
Sbjct: 459 CDKWDKAEELILEMLDRGICLNTIF 483



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 142/283 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++ CK+ ++  ++     M + GV PD +TYNTLI+  C  G ++EA +L+ SM   G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP + TY +LING C+  R D A  +  EM+  G+SP+  TYN +L         + A+
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++  +++ G   ++ +++ ++    +N   D AL  F+ +    L  +   + I+I   
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA  +       G V DV TY+ +   L     L E DDLF  M E G   D 
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
               +++    + G++ +A     ++ +K    +  T + L++
Sbjct: 727 RMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 769



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 48/110 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ AL K  ++D AK         G+ PD  TY+ +      +G LEE   L  SM   G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES 110
                   NS++  L ++G   RA   L  + +   S + +T + LL  S
Sbjct: 722 CSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESS 771


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  317 bits (813), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 164/468 (35%), Positives = 270/468 (57%), Gaps = 11/468 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK + + +      E+ ++G +PD VTYNTLI++ C+ G LEEA +L   MS +G
Sbjct: 43  IINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRG 102

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS--PDTATYNTLLVESCRKENMSE 118
             P V TY+ LINGLCK GR D A+E++ EM +      P+  TYN+ L   C++   +E
Sbjct: 103 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 162

Query: 119 AEEIFCEMSRRG---VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           A E+   + R G   V+PD V+FSTLI    + GQ+D A   F +M + G VP+ + Y  
Sbjct: 163 ACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 221

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           ++NG C+   +  A  M + M++KG   DV+TY+ +++  C+A  + EA +L + M  RG
Sbjct: 222 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 281

Query: 236 -----VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
                + PD  TF  LI G CK GN  +A  LF+ M  K+++PD++T+  LIDG CK G+
Sbjct: 282 CTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 341

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           +E A  +   M +  + PN ++Y  L++G C  G + EA +   EMV  G  P  ++  +
Sbjct: 342 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 401

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++   CR+     A + +S++ S G DPD+++YN L++G  +    ++A  ++ +M  +G
Sbjct: 402 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG 461

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
             PD  T+    +G  R G +  +  +L  ++ KG+ PD +T +++++
Sbjct: 462 HQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 509



 Score =  311 bits (798), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 163/495 (32%), Positives = 273/495 (55%), Gaps = 12/495 (2%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++ +LC+      A ++F  EM + GV P  VTYNT+IN  C+   L    +L   +  +
Sbjct: 7   VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P V TYN+LI+ LCK G  + A+ +  +M   G  P+  TY+ L+   C+   + EA
Sbjct: 67  GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEA 126

Query: 120 EEIFCEMSRRG--VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL--VPDNVLYTI 175
            E+  EM+R+   V P+I+++++ +    +      A    R ++   L   PD V ++ 
Sbjct: 127 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 186

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I+G C+ G + EA  + D+M+  G V +V+TYN ++NGLC+A  +  A  +   M+++G
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS-----IKPDIVTYNTLIDGFCKVGE 290
           V PD  T++ L+   CK   +++AL L   M  +      + PD VT+N LI G CK G 
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN 306

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSCN 349
            E+A+ L+ +M+++ + P+ +++G LI+G C  G V EA R   +++G  G+ P +V+ N
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV-EAARDILDLMGNLGVPPNVVTYN 365

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            ++ G C+SG   +A +FL +MVS G  PDSI+Y +L+    R    D A  LVS++++ 
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 425

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G  PD +TYN+++ G  + G+   +  +L  M+ KG  PD  T+    +G     NL   
Sbjct: 426 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGT 485

Query: 470 FRFHDEMLQRGFVPD 484
                 +L +G +PD
Sbjct: 486 MELLRVVLAKGMLPD 500



 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 141/430 (32%), Positives = 244/430 (56%), Gaps = 10/430 (2%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVL-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
           V  YN ++  LC+ G   RA E+   EM + G++P   TYNT++   C+  ++    E+F
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            E+  RG  PD+V+++TLI    + G L+ A     +M S G VP+ V Y+++ING C+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 184 GFVLEALKMRDEMLEKGC--VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG--VFPD 239
           G + EA ++  EM  K C  + +++TYN+ L+GLC+  M  EA +L   + +    V PD
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF+TLI G CK G +++A ++FD M      P+++TYN L++G CK  +ME+A+ +  
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL-----VSCNTIIKG 354
            M+ + ++P+ I+Y +L++ +C    V EA  L + M  +G  P +     V+ N +I G
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C++G+  +A     +MV++ + PD +++  LI+G  +   ++ A  ++  M N G+ P+
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V+TYN ++ G C+ GR+ ++   L  M+  G  PD  TY +L+      +   +A +   
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 475 EMLQRGFVPD 484
           E+   G+ PD
Sbjct: 421 ELKSFGWDPD 430



 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 226/416 (54%), Gaps = 9/416 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++N LCK  +ID A+  + EM +K   V P+ +TYN+ ++  C++    EA +LM S+  
Sbjct: 113 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 172

Query: 59  KGLK--PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
             L+  P   T+++LI+GLCK G+ D A  V D+M+  G  P+  TYN L+   C+ + M
Sbjct: 173 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 232

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-----LVPDNV 171
             A  +   M  +GV PD++++S L+  F +  ++D AL     M S G     LVPD V
Sbjct: 233 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKV 292

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            + I+I G C+ G   +A  + +EM+ K    DV+T+  +++GLC+A  +  A D+ + M
Sbjct: 293 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 352

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
              GV P+  T+  L+HG CK G + +A    + M      PD +TY +L+   C+    
Sbjct: 353 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRT 412

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           + A +L +++ S    P+ ++Y IL++G    G   +A  +  EMVGKG +P   +    
Sbjct: 413 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 472

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
             G  RSG+ +   E L  ++++G+ PD+ + +++++   R   +D   A++ + E
Sbjct: 473 FSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  317 bits (813), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 164/479 (34%), Positives = 273/479 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+L +  KI  A   L  ME KG  PD V+Y T+I+ YC  G L++  QL+  M  KG
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG 175

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP ++TY+S+I  LCK G+    ++VL EM++ G+ PD   Y TL+   C+  N   A 
Sbjct: 176 LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAY 235

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  R + PD ++FS LI   S +G++  A   F EM   G  PD V YT +I+GY
Sbjct: 236 KLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGY 295

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A  + ++M++ G   +VVTY  + +GLC++  L  A++L +EM  +G+  + 
Sbjct: 296 CKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNI 355

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+++G CK GN+ +A+ L + M +  + PD +TY TL+D + K GEM KA +L  +
Sbjct: 356 STYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLRE 415

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R + P  +++ +L+NG C  G + +  RL   M+ KGI P   + N+I+K YC   +
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNN 475

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              + E    M ++GV PDS +YN LI G  +  NM +A+ L  +M  +       +YN 
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNA 535

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++ GF ++ ++ ++  +   M  +GL      Y   ++ +  + N++      DE +++
Sbjct: 536 LIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 161/482 (33%), Positives = 269/482 (55%), Gaps = 3/482 (0%)

Query: 6   CKDHKIDSAKMFL---CEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK 62
           C   K D   M L    E  Q GV  +T +YN L+N+  R G + EA  L+  M  KG  
Sbjct: 83  CLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI 142

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P V +Y ++I+G C  G   +  +++ EM   GL P+  TY+++++  C+   + E E++
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             EM +RGV PD V ++TLI  F + G    A   F EM++  +VPD++ ++ +I G   
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           +G V+EA K+ +EM++KG   D VTY  +++G C+   + +A  L N+M++ G+ P+  T
Sbjct: 263 SGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVT 322

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +T L  G CK G ++ A  L   M +K ++ +I TYNT+++G CK G + +A KL  +M 
Sbjct: 323 YTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK 382

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              + P+ I+Y  L++ Y   G + +A  L  EM+ +G++PT+V+ N ++ G C SG   
Sbjct: 383 EAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLE 442

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
             +  L  M+ +G+ P++ +YN+++  +    NM  +  +   M  QG+VPD  TYN+++
Sbjct: 443 DGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILI 502

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G C+   M ++  +   M+EK  N   S+Y  LI G   +  L EA +  +EM + G V
Sbjct: 503 KGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLV 562

Query: 483 PD 484
             
Sbjct: 563 AS 564



 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 148/458 (32%), Positives = 252/458 (55%), Gaps = 1/458 (0%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC-KKGRCDRAKEV 87
           D   ++         G L EA +  + +   G+     + N  +  L  K+       +V
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             E  Q+G+  +T +YN L+    R   + EA  +   M  +G  PD+VS++T+I  +  
Sbjct: 98  FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+L + +   +EM+  GL P+   Y+ II   C++G V+E  K+  EM+++G   D V 
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T+++G C+      A  LF+EM  R + PD   F+ LI G    G + +A  LF+ M 
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +K  +PD VTY  LIDG+CK+GEM+KA  L   M+   ++PN ++Y  L +G C  G + 
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  L +EM  KG++  + + NTI+ G C++G+  +A + + +M   G+ PD+I+Y TL+
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           + + +   M KA  L+ +M ++GL P V+T+NV++ G C  G++ D E +L  M+EKG+ 
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           P+ +TY +++  +  +NN++ +   +  M  +G VPD 
Sbjct: 458 PNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDS 495


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  317 bits (812), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 167/485 (34%), Positives = 264/485 (54%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  ++  L ++ +KG+  +  T+N  I   CR+G L  A  +++S+  +G
Sbjct: 222 LLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREG 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TYN+LI GLCK      A++ L +++  GL PD  TYNTL+   C+   +  AE
Sbjct: 282 LTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAE 341

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I      +G  PD  ++ +LI    +N ++DRAL  F      GL P  +LY ++I G 
Sbjct: 342 KILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGL 401

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +L+AL+M +EM E GC  D+ TYN ++NGLC+   +++A++L N+ + +G  PD 
Sbjct: 402 CQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDV 461

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF TLI G+CK   M   + + + M    + PD++TYN++++G  K  + E   + +  
Sbjct: 462 FTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFET 521

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   PN I+Y IL    C  G V EA  L  E++ KGI P  VS  TII G+  +GD
Sbjct: 522 MVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGD 581

Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A +   +M  +  V   + +YN +IN F  + ++     L  +M   G  PD  TY 
Sbjct: 582 LKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYR 641

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++ GFC  G        L  MIEKG  P  +T+  +IN    Q+ + EA      M+  
Sbjct: 642 VMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHN 701

Query: 480 GFVPD 484
           G VP+
Sbjct: 702 GIVPE 706



 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 270/478 (56%), Gaps = 2/478 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +++++++ ++F  +M + G++PD  T+N L++  C++G ++E+ +L+N +  KG+   +F
Sbjct: 194 ENYRVEAYELF-NDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLF 252

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T+N  I GLC+KG    A  +LD +++ GL+PD  TYNTL+   C+  N+ EAE+   ++
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G+ PD  +++TLI  + + G L  A    +     G VPD   Y  +ING C+N  +
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEI 372

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL + +  L KG    V+ YN ++ GLC+  ++ +A  + NEM E G   D +T+  +
Sbjct: 373 DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLV 432

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I+G CK G ++ A NL +    K   PD+ T+NTLIDG+CK  +ME   ++   M S  +
Sbjct: 433 INGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGV 492

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           +P+ I+Y  ++NG        +    +  MV KG  P  ++ N + +  C++G  ++A +
Sbjct: 493 TPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI-TYNVILTGF 425
            + +++++G+ PD++S+ T+I+GF    ++  A+ L  +M  Q  V     TYN+++  F
Sbjct: 553 LVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAF 612

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             +  +H  E +   M   G  PD  TY  +I+G     N    ++F  EM+++GF+P
Sbjct: 613 AEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIP 670



 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 260/476 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +      A      M+  G+ PD  T+   I ++CR      A +L+N+M  +G
Sbjct: 117 IMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +     Y +++ G  ++     A E+ ++ML++G+ PD +T+N LL   C+K  + E+E
Sbjct: 177 CQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESE 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  ++ ++G+  ++ +F+  I    R G L  A+     +   GL PD V Y  +I G 
Sbjct: 237 RLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGL 296

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+N  V+EA K   +++  G   D  TYNT+++G C+  ML  A+ +    + +G  PD 
Sbjct: 297 CKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDE 356

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +LI+G C++  +++AL LF+    K +KP ++ YN LI G C+ G + +A ++  +
Sbjct: 357 FTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNE 416

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     S +  +Y ++ING C MG V++A  L  + + KG  P + + NT+I GYC+   
Sbjct: 417 MSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLK 476

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                + L+KM S GV PD I+YN+++NG  +    +        M  +G VP+ ITYN+
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNI 536

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +    C+ G+++++  ++  ++ KG+ PD  ++ T+I+G  +  +LK A++    M
Sbjct: 537 LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 238/457 (52%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  ++YN ++N     G+ ++A ++   M   G+ P V+T+   I   C+  R   A  +
Sbjct: 109 PSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRL 168

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ M+  G   +   Y T++     +    EA E+F +M R G+ PD+ +F+ L+    +
Sbjct: 169 LNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCK 228

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G++  +     ++   G+  +   + I I G CR G +  A+ M D ++ +G   DVVT
Sbjct: 229 KGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVT 288

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++ GLC+   + EA+   ++++  G+ PD +T+ TLI G+CK G +  A  +     
Sbjct: 289 YNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAI 348

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K   PD  TY +LI+G C+  E+++A  L+   + + + P  I Y +LI G C  G + 
Sbjct: 349 CKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLIL 408

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A ++  EM   G    + + N +I G C+ G  S A+  ++  +++G  PD  ++NTLI
Sbjct: 409 QALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLI 468

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+ ++  M+    +++KM + G+ PDVITYN +L G  +  +  D       M+EKG  
Sbjct: 469 DGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCV 528

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P++ TY  L         + EA    DE+L +G  PD
Sbjct: 529 PNKITYNILTESLCKAGKVNEALDLVDEILNKGITPD 565



 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 243/456 (53%), Gaps = 6/456 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            Y   + +Y R+G ++EA  +   M     +P V +YN+++N L + G   +A +V   M
Sbjct: 78  VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
             +G+ PD  T+   +   CR +    A  +   M  +G   + V++ T++  F      
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
             A   F +M   G+ PD   +  +++  C+ G V E+ ++ +++L+KG   ++ T+N  
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           + GLCR  ML+ A  + + ++  G+ PD  T+ TLI G CK+ N+ +A      +    +
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           +PD  TYNTLIDG+CK+G ++ A K+    I +   P+  +Y  LING C    +  A  
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L+   +GKG+KPT++  N +IKG C+ G   +A + +++M   G   D  +YN +ING  
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   +  A  L++    +G VPDV T+N ++ G+C+Q +M  +  IL +M   G+ PD  
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI 497

Query: 452 TYTTLING---HVSQNNLKEAFRFHDEMLQRGFVPD 484
           TY +++NG    V   +L E F   + M+++G VP+
Sbjct: 498 TYNSVLNGLSKAVKNEDLMETF---ETMVEKGCVPN 530



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 224/417 (53%), Gaps = 1/417 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+  +  A+ +L ++   G+ PD  TYNTLI+ YC+ G L+ A +++     KG
Sbjct: 292 LICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKG 351

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY SLINGLC+    DRA  + +  L  GL P    YN L+   C++  + +A 
Sbjct: 352 FVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQAL 411

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS  G + DI +++ +I    + G +  A     +  + G VPD   +  +I+GY
Sbjct: 412 QMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGY 471

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +   +++ ++M   G   DV+TYN++LNGL +A    +  + F  M+E+G  P+ 
Sbjct: 472 CKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNK 531

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L    CK G +N+AL+L D +  K I PD V++ T+I GF   G+++ A +L+  
Sbjct: 532 ITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRR 591

Query: 301 MISR-KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           M  + K+S    +Y I+IN +     +    +L+ EM   G  P   +   +I G+C +G
Sbjct: 592 MGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITG 651

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           +     +FL +M+ +G  P   ++  +IN    +  + +A  ++  M + G+VP+V+
Sbjct: 652 NTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 208/383 (54%), Gaps = 1/383 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   + +A+  L     KG  PD  TY +LIN  C+   ++ A  L N+  GKG
Sbjct: 327 LIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKG 386

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP V  YN LI GLC++G   +A ++++EM + G S D  TYN ++   C+   +S+A 
Sbjct: 387 LKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDAN 446

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +   +G  PD+ +F+TLI  + +  +++  +    +M S G+ PD + Y  ++NG 
Sbjct: 447 NLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGL 506

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +     + ++  + M+EKGCV + +TYN +   LC+A  + EA DL +E+L +G+ PD 
Sbjct: 507 SKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDT 566

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +F T+I G   +G++  A  LF  M  Q  +     TYN +I+ F +  ++    KL+ 
Sbjct: 567 VSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFL 626

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M +   +P+  +Y ++I+G+C  G+    ++   EM+ KG  P+L +   +I   C   
Sbjct: 627 EMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQH 686

Query: 360 DASKADEFLSKMVSEGVDPDSIS 382
              +A + +  MV  G+ P+ ++
Sbjct: 687 RVHEAVDIIHFMVHNGIVPEVVN 709



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 140/269 (52%)

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
           R   + EA D+F  M      P   ++  +++   + G   +A  +F  M    I PD+ 
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVY 147

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           T+   I  FC+      A +L  +M+S+    N ++Y  ++ G+    +  EA+ L+ +M
Sbjct: 148 TFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDM 207

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           +  GI P + + N ++   C+ G+  +++  L+K++ +G+  +  ++N  I G  R+  +
Sbjct: 208 LRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGML 267

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
             A +++  +  +GL PDV+TYN ++ G C+   + ++E  L +++  GL PD  TY TL
Sbjct: 268 SGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTL 327

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           I+G+     L+ A +     + +GFVPD+
Sbjct: 328 IDGYCKMGMLQNAEKILQGAICKGFVPDE 356


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  317 bits (812), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 168/484 (34%), Positives = 272/484 (56%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK   +  A + L ++ Q+G+  +  TYN  I   C  G L EA +L++ M    
Sbjct: 193 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 252

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LI GLCKK     A   L  M+  G  PD  TYNT++   C+   + EA 
Sbjct: 253 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 311

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +   +G  PD V++ +LI      G ++RAL  F E ++ G+ PD V+Y  ++ G 
Sbjct: 312 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 371

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +L AL++ +EM E+GC  D+ TYN ++NGLC+   +++A  + N+ + +G  PD 
Sbjct: 372 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 431

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF TLI G+CK   ++ AL L + M +  I PD +TYN++++G CK G++ + N+ + +
Sbjct: 432 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 491

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +   PN I+Y ILI  +C    + EA ++  +M  +G+ P  VS NT+I G+CR+GD
Sbjct: 492 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 551

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     K+  +G    + ++NTLI  F  + NM  A  +  +M ++G   D  TY V
Sbjct: 552 LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRV 611

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+   +  + + L  MI+KG  P  ST+  +IN     + + +A      M++ G
Sbjct: 612 LIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 671

Query: 481 FVPD 484
            VP+
Sbjct: 672 VVPE 675



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 244/455 (53%), Gaps = 1/455 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
            V Y T++      G   +A QL + M    + P +  +N +++ LCK+G    A  +L 
Sbjct: 152 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 211

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +++Q G+S +  TYN  +   C    + EA  +   M R    PD+V+++TLI    +  
Sbjct: 212 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKS 270

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
               A+ Y R M + G +PD+  Y  II+GYC+   V EA ++  + + KG V D VTY 
Sbjct: 271 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 330

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           +++NGLC    +  A +LFNE   +G+ PD   + +L+ G C  G +  AL + + M ++
Sbjct: 331 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 390

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
              PDI TYN +I+G CK+G +  A  +  D I +   P+  ++  LI+GYC    +  A
Sbjct: 391 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 450

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            +L   M   GI P  ++ N+++ G C++G  ++ +E   +M+ +G  P+ I+YN LI  
Sbjct: 451 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 510

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           F R   M++A  ++ KM  +GL PD +++N ++ GFCR G +  + L+  ++ EKG +  
Sbjct: 511 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 570

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             T+ TLI     + N+  A +  DEML +G   D
Sbjct: 571 ADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 605



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 229/452 (50%), Gaps = 5/452 (1%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           Y   I AY R G L +A      M      P    YN++++ L      D+A +V   ML
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
             G+SPD  T+   L   C       A  +   +  RG     V++ T++     +G   
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 169

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            A   F +M    + P+   +  +++  C+ G VLEA  +  +++++G  +++ TYN  +
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            GLC A  L EA  L + M    V PD  T+ TLI G CK     +A++    M  +   
Sbjct: 230 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           PD  TYNT+IDG+CK+  +++A +L  D + +   P+ ++Y  LING C+ G V  A  L
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + E   KGIKP +V  N+++KG C  G    A + +++M  EG  PD  +YN +ING  +
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 408

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
             N+  A  +++    +G +PDV T+N ++ G+C++ ++  +  ++ RM E G+ PD  T
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 468

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y +++NG      + E      EM+ +G  P+
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 500



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 221/416 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK      A  +L  M  +G  PD  TYNT+I+ YC+   ++EA +L+     KG
Sbjct: 262 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 321

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY SLINGLC +G  +RA E+ +E    G+ PD   YN+L+   C +  +  A 
Sbjct: 322 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM+  G  PDI +++ +I    + G +  A +   +    G +PD   +  +I+GY
Sbjct: 382 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 441

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  AL++ + M E G   D +TYN++LNGLC+A  + E ++ F EM+ +G  P+ 
Sbjct: 442 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 501

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   C+   M +A  +   M+Q+ + PD V++NTLI GFC+ G++E A  L+  
Sbjct: 502 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 561

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  S    ++  LI  +    ++  A +++ EM+ KG +    +   +I G C++ +
Sbjct: 562 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 621

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
             +A   L +M+ +G  P   ++  +IN       + +A  ++  M   G+VP+V+
Sbjct: 622 VDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 163/378 (43%), Gaps = 65/378 (17%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           LY   I  Y R G + +A+   + M    C      YN I++ L  A    +A  ++  M
Sbjct: 53  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112

Query: 232 LERGVFPDFYTFTTLIHGHC-------------------------------KDGNMNKAL 260
           L  GV PD +T T  +   C                                 G+ + A 
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 172

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            LFD M    + P++  +N ++   CK G++ +A  L   +I R +S N  +Y I I G 
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232

Query: 321 CSMGHVTEAFRL----------------------------------WYEMVGKGIKPTLV 346
           C  G + EA RL                                     M+ +G  P   
Sbjct: 233 CEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + NTII GYC+     +A E L   V +G  PD ++Y +LING   E ++++A  L ++ 
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           + +G+ PD++ YN ++ G C QG +  +  ++  M E+G +PD  TY  +ING     N+
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 467 KEAFRFHDEMLQRGFVPD 484
            +A    ++ + +G++PD
Sbjct: 413 SDATVVMNDAIMKGYLPD 430



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 118/243 (48%), Gaps = 5/243 (2%)

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +   I  + + G +  A++ F+ M   +  P    YN ++D        ++A+K++  M+
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           +  +SP+  ++ I +  +C       A RL   +  +G     V+  T++ G    G   
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 169

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            A +   +M+   V P+  ++N +++   +  ++ +A  L+ K+  +G+  ++ TYN+ +
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G C  GR+ ++  ++  M    + PD  TY TLI G   ++  +EA  +   M+ +G +
Sbjct: 230 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 483 PDD 485
           PDD
Sbjct: 289 PDD 291


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 174/519 (33%), Positives = 281/519 (54%), Gaps = 35/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A CK   ++SAK  + EM + G   + VTYNTLI   CR G +EEAF     M   G
Sbjct: 249 LIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYG 308

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  FTY ++INGLCK+GR D+AK +LDEM   GL P+   Y+TL+    R+ N  EA 
Sbjct: 309 LVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAF 368

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  EMS  GV P+ +++  LI    + G++ RA    ++M   G + D + Y ++I G+
Sbjct: 369 KIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGH 428

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R     EA  + +EM + G   +V TY+ I+NGLC+      A  L  +M+  G+ P+ 
Sbjct: 429 LRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNA 488

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +  LI G+C++G+ + A      MT++++ PD+  YN+LI G   VG+M++A + + +
Sbjct: 489 FVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDE 548

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   PN  +YG LI+GY   G++ +A +L ++M+  G+ P       I++GY +S +
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDN 608

Query: 361 ASKADEFLSKMVSE-----------------------------------GVDPDSISYNT 385
             K    L  M+ +                                   G+ PDS+ Y +
Sbjct: 609 LEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGS 668

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+GF +  +M+KA  L+ +M  +G+ P +  YN ++ GFC+   +  +  I   +I KG
Sbjct: 669 LISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKG 728

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L P+  TYTTLI+G+    ++++A   ++EML  G  PD
Sbjct: 729 LPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPD 767



 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 154/487 (31%), Positives = 271/487 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  + D AK  L EM   G+ P+ V Y+TLI+ + R+G  +EAF+++  MS  G
Sbjct: 319 IINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TY++LI GLCK GR  RA  +L +M ++G   DT TYN ++    R+ N  EA 
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAF 438

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM + G++P++ ++S +I    + G+ +RA     +M + GL P+  +Y  +I+GY
Sbjct: 439 LLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGY 498

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G    A +   +M  +    D+  YN+++ GL     + EA + ++EMLE+G  P+ 
Sbjct: 499 CREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPND 558

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  LIHG+   GN+ KA  L   M    + P+   Y  +++G+ K   +EK +     
Sbjct: 559 FTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKS 618

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+   YGI+I+   S GH+  A  +   +   G+ P  +   ++I G+C++ D
Sbjct: 619 MLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAAD 678

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L +M  +G++P    YN LI+GF + +++  A  + + +  +GL P+ +TY  
Sbjct: 679 MEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTT 738

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G+C+ G + D+  +   M+ +G+ PD   Y+ L  G  +  +L++A    +EM+ RG
Sbjct: 739 LIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG 798

Query: 481 FVPDDAF 487
           +    +F
Sbjct: 799 YAIISSF 805



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 262/534 (49%), Gaps = 55/534 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK  ++  A   L +M + G   DT+TYN +I  + R+   EEAF L+N M   G
Sbjct: 389 LIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGG 448

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TY+ +INGLC+ G  +RA  +L++M+  GL P+   Y  L+   CR+ + S A 
Sbjct: 449 ISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLAC 508

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   +M+R  + PD+  +++LI   S  G++D A+ Y+ EM   G  P++  Y  +I+GY
Sbjct: 509 ETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGY 568

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + +A ++  +ML  G   +   Y  IL G  ++  L +       MLE+G+ PD 
Sbjct: 569 SMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDN 628

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  +IH     G+M  A+++  ++ +  + PD + Y +LI GFCK  +MEKA  L  +
Sbjct: 629 RLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDE 688

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I P    Y  LI+G+C    ++ A  ++  ++ KG+ P  V+  T+I GYC++GD
Sbjct: 689 MAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGD 748

Query: 361 ASKADEFLSKMVSEGVDPDSI----------------------------------SYNTL 386
              A +  ++M++EGV PD+                                   S+NTL
Sbjct: 749 IRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTL 808

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR------ 440
           ++GF +   + +    +  M ++ +VP ++T   I+ G    G++ ++  I         
Sbjct: 809 VHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNA 868

Query: 441 --------------MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
                         MI +GL P       +I  H  Q  L +A   HD ++ +G
Sbjct: 869 SHRDTDHLSSLFTDMINQGLVP-LDVIHNMIQSHCKQGYLDKALMLHDALVAKG 921



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/455 (33%), Positives = 237/455 (52%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           V  + L++ Y + G + +  +++  M   GL P +   N L+  L +    D   +V   
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M   G+SPD  TY+TL+   C+  ++  A+++  EM   G + ++V+++TLIG   R G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           ++ A  Y +EM+  GLVPD   Y  IING C+ G   +A  + DEM   G + +VV Y+T
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +++G  R     EA  +  EM   GV P+  T+  LI G CK G M +A  +   MT+  
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
              D +TYN +I+G  +    E+A  L  +M    ISPN  +Y I+ING C +G    A 
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L  +M+  G+KP       +I GYCR G  S A E L KM  E + PD   YN+LI G 
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
                MD+A     +M  +G  P+  TY  ++ G+   G +  +E +L +M+  GLNP+ 
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             Y  ++ G+   +NL++       ML++G +PD+
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDN 628



 Score =  257 bits (657), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 150/473 (31%), Positives = 245/473 (51%), Gaps = 1/473 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D A++ L  M+  G+ P     N L+    R   L+  +++   M G G+ P V+TY++L
Sbjct: 191 DGAEVVLL-MKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTL 249

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I   CK    + AK+V++EM + G S +  TYNTL+   CR   + EA     EM   G+
Sbjct: 250 IEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGL 309

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            PD  ++  +I    + G+ D+A     EM  AGL+P+ V+Y+ +I+G+ R G   EA K
Sbjct: 310 VPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFK 369

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  EM   G   + +TY+ ++ GLC+   +  A  +  +M + G   D  T+  +I GH 
Sbjct: 370 IVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHL 429

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           +  N  +A  L + M +  I P++ TY+ +I+G C++GE E+A+ L   MI+  + PN  
Sbjct: 430 RQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAF 489

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y  LI+GYC  G  + A     +M  + + P L   N++I G    G   +A E+  +M
Sbjct: 490 VYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM 549

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           + +G  P+  +Y  LI+G+    N++KA  L+ +M N GL P+   Y  IL G+ +   +
Sbjct: 550 LEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNL 609

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                 L  M+EKGL PD   Y  +I+   S  +++ A      + + G VPD
Sbjct: 610 EKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 157/468 (33%), Positives = 270/468 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV PD +TYN++++ YC  G  +EA   +  M   G
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY+SL+N LCK GR   A+++ D M + GL PD ATY TLL     K  + E  
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ PD   F+ LI  +++  ++D+A++ F +M+  GL P+ V Y  +I+  
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A+   ++M+++G   +++ Y ++++GLC      +A++L  EML+RG+  + 
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I  HCK+G + ++  LFD+M +  +KPDI+TYNTLIDG C  G+M++A KL A 
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++YG LINGYC +  + +A  L+ EMV  G+ P +++ N I++G   +  
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    +   G   +  +YN +++G  +    D+A  +   +    L  +  T+N+
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           ++    + GRM +++ +       GL PD  TY+ +    + Q +L+E
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE 709



 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/558 (29%), Positives = 268/558 (48%), Gaps = 74/558 (13%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC D +  D+  + L  M + G  PD  +YN L+   C E   +EA +L++ M+  
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 58  -GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            G G  P V +YN+++NG  K+G  D+A     EML  G+ PD  TY++++   C+ + M
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A E+   M + GV PD +++++++  +  +GQ   A+   ++M+S G+ P+ V Y+ +
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           +N  C+NG   EA K+ D M ++G   D+ TY T+L G      L E   L + M+  G+
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD + F  LI  + K   +++A+ +F  M Q  + P++V Y T+ID  CK G ++ A  
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 297 LWADMISRKISPNYISYGILING-----------------------------------YC 321
            +  MI   ++PN I Y  LI+G                                   +C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G V E+ +L+  MV  G+KP +++ NT+I G C +G   +A + L+ MVS GV PD +
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL------------------- 422
           +Y TLING+ R   MD A AL  +M + G+ P++ITYN+IL                   
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612

Query: 423 ----------------TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
                            G C+     ++  +   +    L  +  T+  +I   +    +
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672

Query: 467 KEAFRFHDEMLQRGFVPD 484
            EA          G VPD
Sbjct: 673 DEAKDLFAAHSANGLVPD 690



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 264/488 (54%), Gaps = 4/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++   C+  ++D     L  + +KG   D +T+  L+   C +    +A  + +  M+  
Sbjct: 98  LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ---MGLSPDTATYNTLLVESCRKENM 116
           G  P VF+YN+L+ GLC + R   A E+L  M      G  PD  +YNT+L    ++ + 
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDS 217

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A   + EM  RG+ PD+V++S++I    +   +D+A+     M   G++PD + Y  I
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++GYC +G   EA+    +M   G   +VVTY++++N LC+    TEA  +F+ M +RG+
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD  T+ TL+ G+   G + +   L D+M +  I+PD   +N LI  + K  ++++A  
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +++ M    ++PN + YG +I+  C  G V +A   + +M+ +G+ P ++   ++I G C
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
                 KA+E + +M+  G+  ++I +N++I+   +E  + ++  L   M   G+ PD+I
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 517

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN ++ G C  G+M ++  +L  M+  G+ PD  TY TLING+   + + +A     EM
Sbjct: 518 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577

Query: 477 LQRGFVPD 484
           +  G  P+
Sbjct: 578 VSSGVSPN 585



 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 150/463 (32%), Positives = 247/463 (53%), Gaps = 4/463 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P   TY  LI   CR G L+  F  + ++  KG +    T+  L+ GLC   R   A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR---GVAPDIVSFSTL 141
           + VL  M ++G  PD  +YN LL   C +    EA E+   M+     G  PD+VS++T+
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           +  F + G  D+A   + EM   G++PD V Y+ II   C+   + +A+++ + M++ G 
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + D +TYN+IL+G C +    EA     +M   GV P+  T+++L++  CK+G   +A  
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +FD MT++ ++PDI TY TL+ G+   G + + + L   M+   I P++  + ILI  Y 
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
               V +A  ++ +M   G+ P +V   T+I   C+SG    A  +  +M+ EG+ P+ I
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            Y +LI+G    +  DKA  L+ +M ++G+  + I +N I+   C++GR+ +SE +   M
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  G+ PD  TY TLI+G      + EA +    M+  G  PD
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 214/445 (48%), Gaps = 40/445 (8%)

Query: 49  AFQLMNSMSGKG---LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           A    N M+  G   + P V TY  LI   C+ GR D     L  +++ G   D  T+  
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           LL   C  +  S+A +I                                    R M   G
Sbjct: 133 LLKGLCADKRTSDAMDIV----------------------------------LRRMTELG 158

Query: 166 LVPDNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
            +PD   Y  ++ G C   R+   LE L M  +    G   DVV+YNT+LNG  +     
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           +A   ++EML+RG+ PD  T++++I   CK   M+KA+ + + M +  + PD +TYN+++
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            G+C  G+ ++A      M S  + PN ++Y  L+N  C  G  TEA +++  M  +G++
Sbjct: 279 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE 338

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P + +  T+++GY   G   +    L  MV  G+ PD   +N LI  + ++E +D+A  +
Sbjct: 339 PDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 398

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
            SKM   GL P+V+ Y  ++   C+ G + D+ L   +MI++GL P+   YT+LI+G  +
Sbjct: 399 FSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCT 458

Query: 463 QNNLKEAFRFHDEMLQRGFVPDDAF 487
            +   +A     EML RG   +  F
Sbjct: 459 CDKWDKAEELILEMLDRGICLNTIF 483



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 142/283 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++ CK+ ++  ++     M + GV PD +TYNTLI+  C  G ++EA +L+ SM   G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP + TY +LING C+  R D A  +  EM+  G+SP+  TYN +L         + A+
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++  +++ G   ++ +++ ++    +N   D AL  F+ +    L  +   + I+I   
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA  +       G V DV TY+ +   L     L E DDLF  M E G   D 
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
               +++    + G++ +A     ++ +K    +  T + L++
Sbjct: 727 RMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 769



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 48/110 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ AL K  ++D AK         G+ PD  TY+ +      +G LEE   L  SM   G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES 110
                   NS++  L ++G   RA   L  + +   S + +T + LL  S
Sbjct: 722 CSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESS 771


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  317 bits (811), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 168/484 (34%), Positives = 272/484 (56%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK   +  A + L ++ Q+G+  +  TYN  I   C  G L EA +L++ M    
Sbjct: 192 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 251

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LI GLCKK     A   L  M+  G  PD  TYNT++   C+   + EA 
Sbjct: 252 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 310

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +   +G  PD V++ +LI      G ++RAL  F E ++ G+ PD V+Y  ++ G 
Sbjct: 311 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 370

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +L AL++ +EM E+GC  D+ TYN ++NGLC+   +++A  + N+ + +G  PD 
Sbjct: 371 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 430

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF TLI G+CK   ++ AL L + M +  I PD +TYN++++G CK G++ + N+ + +
Sbjct: 431 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 490

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +   PN I+Y ILI  +C    + EA ++  +M  +G+ P  VS NT+I G+CR+GD
Sbjct: 491 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 550

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     K+  +G    + ++NTLI  F  + NM  A  +  +M ++G   D  TY V
Sbjct: 551 LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRV 610

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+   +  + + L  MI+KG  P  ST+  +IN     + + +A      M++ G
Sbjct: 611 LIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 670

Query: 481 FVPD 484
            VP+
Sbjct: 671 VVPE 674



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 244/455 (53%), Gaps = 1/455 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
            V Y T++      G   +A QL + M    + P +  +N +++ LCK+G    A  +L 
Sbjct: 151 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 210

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +++Q G+S +  TYN  +   C    + EA  +   M R    PD+V+++TLI    +  
Sbjct: 211 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKS 269

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
               A+ Y R M + G +PD+  Y  II+GYC+   V EA ++  + + KG V D VTY 
Sbjct: 270 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 329

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           +++NGLC    +  A +LFNE   +G+ PD   + +L+ G C  G +  AL + + M ++
Sbjct: 330 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 389

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
              PDI TYN +I+G CK+G +  A  +  D I +   P+  ++  LI+GYC    +  A
Sbjct: 390 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 449

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            +L   M   GI P  ++ N+++ G C++G  ++ +E   +M+ +G  P+ I+YN LI  
Sbjct: 450 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 509

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           F R   M++A  ++ KM  +GL PD +++N ++ GFCR G +  + L+  ++ EKG +  
Sbjct: 510 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 569

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             T+ TLI     + N+  A +  DEML +G   D
Sbjct: 570 ADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 604



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 229/452 (50%), Gaps = 5/452 (1%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           Y   I AY R G L +A      M      P    YN++++ L      D+A +V   ML
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
             G+SPD  T+   L   C       A  +   +  RG     V++ T++     +G   
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 168

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            A   F +M    + P+   +  +++  C+ G VLEA  +  +++++G  +++ TYN  +
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            GLC A  L EA  L + M    V PD  T+ TLI G CK     +A++    M  +   
Sbjct: 229 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           PD  TYNT+IDG+CK+  +++A +L  D + +   P+ ++Y  LING C+ G V  A  L
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + E   KGIKP +V  N+++KG C  G    A + +++M  EG  PD  +YN +ING  +
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 407

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
             N+  A  +++    +G +PDV T+N ++ G+C++ ++  +  ++ RM E G+ PD  T
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 467

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y +++NG      + E      EM+ +G  P+
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 499



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 221/416 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK      A  +L  M  +G  PD  TYNT+I+ YC+   ++EA +L+     KG
Sbjct: 261 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 320

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY SLINGLC +G  +RA E+ +E    G+ PD   YN+L+   C +  +  A 
Sbjct: 321 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM+  G  PDI +++ +I    + G +  A +   +    G +PD   +  +I+GY
Sbjct: 381 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 440

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  AL++ + M E G   D +TYN++LNGLC+A  + E ++ F EM+ +G  P+ 
Sbjct: 441 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 500

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   C+   M +A  +   M+Q+ + PD V++NTLI GFC+ G++E A  L+  
Sbjct: 501 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 560

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  S    ++  LI  +    ++  A +++ EM+ KG +    +   +I G C++ +
Sbjct: 561 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 620

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
             +A   L +M+ +G  P   ++  +IN       + +A  ++  M   G+VP+V+
Sbjct: 621 VDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 163/378 (43%), Gaps = 65/378 (17%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           LY   I  Y R G + +A+   + M    C      YN I++ L  A    +A  ++  M
Sbjct: 52  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111

Query: 232 LERGVFPDFYTFTTLIHGHC-------------------------------KDGNMNKAL 260
           L  GV PD +T T  +   C                                 G+ + A 
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 171

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            LFD M    + P++  +N ++   CK G++ +A  L   +I R +S N  +Y I I G 
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231

Query: 321 CSMGHVTEAFRL----------------------------------WYEMVGKGIKPTLV 346
           C  G + EA RL                                     M+ +G  P   
Sbjct: 232 CEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + NTII GYC+     +A E L   V +G  PD ++Y +LING   E ++++A  L ++ 
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           + +G+ PD++ YN ++ G C QG +  +  ++  M E+G +PD  TY  +ING     N+
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 467 KEAFRFHDEMLQRGFVPD 484
            +A    ++ + +G++PD
Sbjct: 412 SDATVVMNDAIMKGYLPD 429



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 118/243 (48%), Gaps = 5/243 (2%)

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +   I  + + G +  A++ F+ M   +  P    YN ++D        ++A+K++  M+
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           +  +SP+  ++ I +  +C       A RL   +  +G     V+  T++ G    G   
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 168

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            A +   +M+   V P+  ++N +++   +  ++ +A  L+ K+  +G+  ++ TYN+ +
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G C  GR+ ++  ++  M    + PD  TY TLI G   ++  +EA  +   M+ +G +
Sbjct: 229 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 483 PDD 485
           PDD
Sbjct: 288 PDD 290


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  317 bits (811), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/487 (33%), Positives = 268/487 (55%), Gaps = 7/487 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ LC+  +I  A+     M + G +P+ +TYN L++  C  G + +A  L   M   G 
Sbjct: 57  ISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGY 116

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P V TYN+L++G CK G+ D A ++ D  ++ G  PD  TYN L+   C+ + + EA+ 
Sbjct: 117 SPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQR 176

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           I   M    + PD+V++++L+    +NG++D A M   +    G  P+ + Y+ +I+G C
Sbjct: 177 ILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLC 233

Query: 182 RNGFVLE-ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           R    LE A ++ ++M+  GC  D+V+YN +++GL R + ++EA  LF  +L +G  P+ 
Sbjct: 234 RELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEV 293

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G  K+  +N+A  LF  + +  ++PD +TY   IDG CK G +E A  +  D
Sbjct: 294 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 353

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +   P+ +S+  +ING C    V EA  L   M  KG  P  +S NT+I G CR+G 
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVR---EENMDKAFALVSKMENQGLVPDVIT 417
             KA     +M+  GV P  ++YN L++G  +   E  + +A  L   M  +G VPDV+T
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 473

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y+ ++ G  + G++ D+  +L  M  KG  P+  TY +LI+G    + + EA      M+
Sbjct: 474 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMV 533

Query: 478 QRGFVPD 484
           ++G VPD
Sbjct: 534 EKGCVPD 540



 Score =  311 bits (796), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 165/487 (33%), Positives = 273/487 (56%), Gaps = 7/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   ++  A+     M + G  PD VTYNTL++ +C+ G L+EA ++ +    +G
Sbjct: 91  LLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRG 150

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+LING CK  + D A+ +L  M+   L PD  TYN+L+   C+   + EA 
Sbjct: 151 FVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR 210

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRN-GQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +   +G +P+++++STLI    R   +L+ A     +M   G  PD V Y  +I+G
Sbjct: 211 MLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHG 267

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             R   V EALK+   +L +G   +V TYN +++GL +   + EA +LF+ +++ G+ PD
Sbjct: 268 LAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPD 327

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T  I G CK G +  AL +   M +K   PD+V++N +I+G CK   +++A  L +
Sbjct: 328 AITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLS 387

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS- 358
            M ++  SPN IS+  LI G C  G   +A   + EM+ +G+KPT+V+ N ++ G C++ 
Sbjct: 388 GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKAR 447

Query: 359 --GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
             G   +A      M+ +G  PD ++Y+ LI+G  +   +D A  L+  ME +G +P+V 
Sbjct: 448 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 507

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN +++G C   ++ ++  +   M+EKG  PD  TY T+I+    Q  + +A    D  
Sbjct: 508 TYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGS 567

Query: 477 LQRGFVP 483
           L+ G VP
Sbjct: 568 LEAGVVP 574



 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 157/438 (35%), Positives = 254/438 (57%), Gaps = 7/438 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  K+D A+  L  M  + + PD VTYN+L+N  C+ G ++EA  L+     KG
Sbjct: 161 LINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KG 217

Query: 61  LKPGVFTYNSLINGLCKK-GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             P V TY++LI+GLC++  R + A+++L++M+  G  PD  +YN L+    R++ +SEA
Sbjct: 218 FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEA 277

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++F  + R+G  P++ +++ LI    +  +++ A   F  +   GL PD + YT+ I+G
Sbjct: 278 LKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG 337

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G V +AL M  +M EKGCV DVV++N ++NGLC+ K + EA+ L + M  +G  P+
Sbjct: 338 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN 397

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV---GEMEKANK 296
             +F TLI G C+ G   KA+  F  M ++ +KP +VTYN L+DG CK    G +++A  
Sbjct: 398 AISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT 457

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+  MI +   P+ ++Y  LI+G    G + +A RL   M  KG  P + + N++I G C
Sbjct: 458 LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 517

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
                 +A E    MV +G  PD+I+Y T+I+   ++E +DKA AL       G+VP   
Sbjct: 518 GLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSG 577

Query: 417 TYNVILTGFCRQGRMHDS 434
            Y  ++ G C   R+ ++
Sbjct: 578 MYFSLIDGLCAVARVDEA 595



 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/461 (34%), Positives = 255/461 (55%), Gaps = 8/461 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD  T   L+ +  + G +E+A + +  +  KGL   + T+N  I+GLC+  R   A+ V
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTV 72

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            D M + G  P+  TYN LL   C    MS+A+ ++  M + G +PD+V+++TL+  F +
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+LD AL  F      G VPD V Y  +ING+C+   + EA ++   M+ +  V DVVT
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD-GNMNKALNLFDIM 266
           YN+++NGLC+   + EA  L   ++++G  P+  T++TLI G C++   +  A  L + M
Sbjct: 193 YNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
                KPDIV+YN LI G  +   + +A KL+  ++ +   P   +Y ILI+G      V
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EAF L+  +V  G++P  ++    I G C++G    A   L  M  +G  PD +S+N +
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           ING  +E+ +D+A  L+S ME +G  P+ I++N ++ G CR G+   +      M+++G+
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429

Query: 447 NPDRSTYTTLINGHV---SQNNLKEAFRFHDEMLQRGFVPD 484
            P   TY  L++G      +  +KEA    D M+++G VPD
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPD 470



 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 158/477 (33%), Positives = 259/477 (54%), Gaps = 9/477 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  K+D A        ++G  PD VTYN LIN +C+   L+EA +++  M  + 
Sbjct: 126 LLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES 185

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK-ENMSEA 119
           L P V TYNSL+NGLCK GR D A+ ++   +  G SP+  TY+TL+   CR+   +  A
Sbjct: 186 LVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESA 242

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  +M   G  PDIVS++ LI   +R   +  AL  F  +   G  P+   Y I+I+G
Sbjct: 243 RQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDG 302

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             +   V EA ++   +++ G   D +TY   ++GLC+A  + +A  +  +M E+G  PD
Sbjct: 303 LLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPD 362

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             +   +I+G CK+  +++A  L   M  K   P+ +++NTLI G C+ G+ +KA   + 
Sbjct: 363 VVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFK 422

Query: 300 DMISRKISPNYISYGILINGYCSM---GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +M+ R + P  ++Y IL++G C     G + EA  L+  M+ KG  P +V+ + +I G  
Sbjct: 423 EMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLG 482

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           ++G    A   L  M ++G  P+  +YN+LI+G    + +D+A  L   M  +G VPD I
Sbjct: 483 KAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTI 542

Query: 417 TYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           TY  I++  C+Q  M D  L L+   +E G+ P    Y +LI+G  +   + EA + 
Sbjct: 543 TYGTIISALCKQ-EMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 91/185 (49%), Gaps = 1/185 (0%)

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           D + R  SP+  + GIL+      G + +A R   +++ KG+   + + N  I G CR+ 
Sbjct: 6   DKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRAS 64

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A      M   G  P+ I+YN L++G      M  A AL  +M   G  PDV+TYN
Sbjct: 65  RIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYN 124

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L GFC+ G++ ++  I    +++G  PD  TY  LING    + L EA R    M+  
Sbjct: 125 TLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE 184

Query: 480 GFVPD 484
             VPD
Sbjct: 185 SLVPD 189


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  317 bits (811), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 153/456 (33%), Positives = 254/456 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  K++ A+    ++   GV P TV Y +LI+  C     ++A +L   M+ +G
Sbjct: 16  LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN +I+  CK+G  + A +++ +M++ G  PD  TYNT++   C+   + EA 
Sbjct: 76  CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM R G  P+  S +T+I    +  ++D+A   F EM++  + PD+  Y I+I+G 
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGL 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA K+   ML+ G     VTYN +++G+C A  L EA +LF  M  +G  P  
Sbjct: 196 AKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF  LI  HCK G +++A  L   MT     PD+VTY+TLI G C +  ++ A  L  D
Sbjct: 256 FTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R+  P  ++   LI+G C  G + EA  +   MV  G  P +V+ NT++ G+CR+G 
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E LS MV+ G+ P+ ++Y  L++G  +   + +A  + ++M++ G  P++ TY  
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           ++ GFC  G++     +   M+  G++PD   Y TL
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471



 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 156/464 (33%), Positives = 254/464 (54%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M ++ V PD+ +Y  LI+   + G L +A  L   +   G+ P    Y SLI+GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A+E+  +M + G  P   TYN ++  SC++  + EA ++  +M   G  PD+V+++T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++    ++ +++ AL+ F EM+  G  P+   +  II G C+   + +A ++  EM  K 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D  +Y  +++GL +A  L EA  LF  ML+ G+ P   T+  +IHG C    +++AL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            LF  M  K  +P   T+N LID  CK G++++A +L   M      P+ ++Y  LI+G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           CS+  V +A  L  +MV +  KPT+V+ NT+I G C++G   +A E L  MVS G  PD 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YNTL++G  R    ++A  L+S M  +GL P+V+TY  +++G C+  R+ ++  +  +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M   G  P+  TYT LI G  S   +    +   EM+  G  PD
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464



 Score =  290 bits (743), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 259/489 (52%), Gaps = 10/489 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC  +  D A+    +M ++G  P  VTYN +I+A C+ G LEEA  L+  M   G
Sbjct: 51  LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 110

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN++++GLCK  R + A  + +EM ++G +P+  ++NT+++  C++  + +A 
Sbjct: 111 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  + + PD  S+  LI   ++ G+L+ A   F+ M  +G+ P  V Y ++I+G 
Sbjct: 171 QVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM 230

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EAL++   M  KGC     T+N +++  C+   L EA  L   M + G  PD 
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDV 290

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI G C    ++ A +L + M ++  KP +VT NTLI G CK G +++A ++   
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 350

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S   SP+ ++Y  L++G+C  G    A  L  +MV +G+ P +V+   ++ G C++  
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A    ++M S G  P+  +Y  LI GF     +D    L  +M   G+ PD + Y  
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRS------TYTTLINGHVSQNNLKEAFRFHD 474
           +    C+ GR   +  IL     +G    RS       Y   ++G +    ++ A  F  
Sbjct: 471 LAAELCKSGRSARALEIL----REGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVR 526

Query: 475 EMLQRGFVP 483
           +M++ G +P
Sbjct: 527 DMVRGGQLP 535



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 206/444 (46%), Gaps = 72/444 (16%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +++ A +   EME+ G  P+  ++NT+I   C++  +++A Q+ + M  K 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  ++Y  LI+GL K G+ + A ++   ML  G++P   TYN ++   C    + EA 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M  +G  P   +F+ LI    + G+LD A    + M   G VPD V Y+ +I+G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V +A  + ++M+++ C   VVT NT+++GLC+A  + EA ++ + M+  G  PD 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG---------------- 284
            T+ TL+HGHC+ G   +A  L   M  + + P++VTY  L+ G                
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 285 -------------------FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                              FC  G+++   KL+ +M+   ISP+++ YG L    C  G 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 326 VTEAFRLWYE-------------------------------------MVGKGIKPTLVSC 348
              A  +  E                                     MV  G  P    C
Sbjct: 481 SARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERC 540

Query: 349 NTIIKGYCRSGDASKADEFLSKMV 372
            +++ G C+SG   +A   L +++
Sbjct: 541 ASLVAGLCKSGQGGEARAVLEEIM 564



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 37/235 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +I  A+  L  M   G  PD VTYNTL++ +CR G  E A +L++ M  +G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY +L++GLCK  R   A  V  +M   G +P+  TY  L++  C    +    
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-------------------- 160
           ++F EM   G++PD V + TL     ++G+  RAL   RE                    
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510

Query: 161 -----------------MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
                            M   G +P       ++ G C++G   EA  + +E+++
Sbjct: 511 GLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  316 bits (810), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/513 (31%), Positives = 277/513 (53%), Gaps = 35/513 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++D A+    +M +KGV P+ VTYNT+I+  C+   ++ A  +   M  KG
Sbjct: 231 IIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKG 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TYN++I+GLCK    DRA+ V  +M+  G+ PD  TYNT++   C+ + + +AE
Sbjct: 291 VKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAE 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +GV PD ++++ +I    +   +DRA   F++M   G+ P+N  Y  +I+GY
Sbjct: 351 GVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGY 410

Query: 181 -----------------------------------CRNGFVLEALKMRDEMLEKGCVMDV 205
                                              C+NG   EA  + D M+ KG    V
Sbjct: 411 LSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSV 470

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y  +L+G  +   L+E  DL N M+  G+ P+   F T+I  + K   +++ +++F  
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M Q+ + P++VTY TLID  CK+G ++ A   +  MI+  ++PN + +  L+ G C++  
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +   L+ EM+ +GI+P +V  NT++   C+ G   +A   +  MV  G+ PD ISYNT
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G      MD+A  L+  M + GL P++++YN +L G+C+ GR+ ++  +   M+ KG
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + P   TY T++NG        EA   +  M++
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEARELYVNMIK 743



 Score =  305 bits (780), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 159/491 (32%), Positives = 279/491 (56%), Gaps = 7/491 (1%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM--- 56
           ++  LC   ++  A  + L +M + G     V+YNTL+   C     EEA +L++ M   
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
                 P V +YN +ING   +G+ D+A  +    L+MG+SPD  TYNT++   C+ + +
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEV 241

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             AE++F +M  +GV P+ V+++T+I    +  ++D A   F++M   G+ P NV Y  I
Sbjct: 242 DRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTI 301

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I+G C+   V  A  +  +M+++G   D VTYNTI++GLC+A+ + +A+ +F +M+++GV
Sbjct: 302 IDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD  T+T +I G CK  ++++A  +F  M  K +KP+  TYN LI G+   G+ E+  +
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQ 421

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
              +M +  + P+  +YG+L++  C  G   EA  L+  M+ KGIKP++     ++ GY 
Sbjct: 422 RIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYG 481

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G  S+  + L+ MV+ G+ P+   +NT+I  + +   +D+   +  KM+ QGL P+V+
Sbjct: 482 KKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVV 541

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY  ++   C+ GR+ D+ L   +MI +G+ P+   + +L+ G  + +  ++      EM
Sbjct: 542 TYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601

Query: 477 LQRGFVPDDAF 487
           L +G  PD  F
Sbjct: 602 LNQGIRPDIVF 612



 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 267/484 (55%), Gaps = 3/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N    + ++D A     EM   GV PD VTYNT+I+  C+   ++ A  +   M  KG
Sbjct: 199 VINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG 255

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TYN++I+GLCK    D A+ V  +M+  G+ P   TYNT++   C+ + +  AE
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE 315

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  RGV PD V+++T+I    +   +D+A   F++M   G+ PDN+ YTIII+G 
Sbjct: 316 GVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V  A  +  +M++KG   +  TYN +++G        E      EM    + PD 
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  L+   CK+G  N+A +LFD M +K IKP +  Y  ++ G+ K G + + + L   
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNL 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++  ISPN+  +  +I  Y     + E   ++ +M  +G+ P +V+  T+I   C+ G 
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A    ++M++EGV P+++ +N+L+ G    +  +K   L  +M NQG+ PD++ +N 
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNT 615

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L   C++GR+ ++  ++  M+  GL PD  +Y TLI+GH   + + EA +  D M+  G
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675

Query: 481 FVPD 484
             P+
Sbjct: 676 LKPN 679



 Score =  298 bits (762), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 264/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+    +M  KGV P+  TYN LI+ Y   G  EE  Q +  MS   
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P VFTY  L++ LCK G+C+ A+ + D M++ G+ P    Y  +L    +K  +SE  
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M   G++P+   F+T+I  +++   +D  +  F +MK  GL P+ V Y  +I+  
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A+   ++M+ +G   + V +N+++ GLC      + ++LF EML +G+ PD 
Sbjct: 551 CKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDI 610

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F T++   CK+G + +A  L D M    +KPD+++YNTLIDG C    M++A KL   
Sbjct: 611 VFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG 670

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + PN +SY  L++GYC  G +  A+ L+ EM+ KG+ P + + NTI+ G  RSG 
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A E    M+         +Y+ +++GF +    D+AF +   + +  L  D+IT+N+
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + GR  D+  +   +   GL P   TY  +    + + +L+E       M + G
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850

Query: 481 FVPD 484
             P+
Sbjct: 851 TAPN 854



 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 257/476 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+    +M  +GV PD VTYNT+I+  C+   +++A  +   M  KG
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG 360

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TY  +I+GLCK    DRA+ V  +M+  G+ P+  TYN L+          E  
Sbjct: 361 VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVV 420

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   EMS   + PD+ ++  L+    +NG+ + A   F  M   G+ P   +Y I+++GY
Sbjct: 421 QRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGY 480

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + E   + + M+  G   +   +NT++    +  M+ E   +F +M ++G+ P+ 
Sbjct: 481 GKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNV 540

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI   CK G ++ A+  F+ M  + + P+ V +N+L+ G C V + EK  +L+ +
Sbjct: 541 VTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLE 600

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+++ I P+ + +  ++   C  G V EA RL   MV  G+KP ++S NT+I G+C +  
Sbjct: 601 MLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASR 660

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + L  MVS G+ P+ +SYNTL++G+ +   +D A+ L  +M  +G+ P V TYN 
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNT 720

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           IL G  R GR  ++  +   MI+        TY+ +++G    N   EAF+    +
Sbjct: 721 ILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSL 776



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/553 (28%), Positives = 269/553 (48%), Gaps = 70/553 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++D A+    +M  KGV P  VTYNT+I+  C+   ++ A  +   M  +G
Sbjct: 266 IIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG 325

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TYN++I+GLCK    D+A+ V  +M+  G+ PD  TY  ++   C+ +++  AE
Sbjct: 326 VKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAE 385

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +GV P+  +++ LI  +   GQ +  +   +EM +  L PD   Y ++++  
Sbjct: 386 GVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYL 445

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG   EA  + D M+ KG    V  Y  +L+G  +   L+E  DL N M+  G+ P+ 
Sbjct: 446 CKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNH 505

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F T+I  + K   +++ +++F  M Q+ + P++VTY TLID  CK+G ++ A   +  
Sbjct: 506 RIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQ 565

Query: 301 MISRKISPNYISYGILINGYCSM-----------------------------------GH 325
           MI+  ++PN + +  L+ G C++                                   G 
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V EA RL   MV  G+KP ++S NT+I G+C +    +A + L  MVS G+ P+ +SYNT
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYN-------------------------- 419
           L++G+ +   +D A+ L  +M  +G+ P V TYN                          
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745

Query: 420 ---------VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
                    +IL GFC+     ++  I   +    L  D  T+  +I+G       ++A 
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAM 805

Query: 471 RFHDEMLQRGFVP 483
                +   G VP
Sbjct: 806 DLFAAIPANGLVP 818



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 217/408 (53%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   G+ P+   +NT+I AY +   ++E   +   M  +GL P V TY +LI+ LCK GR
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A    ++M+  G++P+   +N+L+   C  +   + EE+F EM  +G+ PDIV F+T
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNT 615

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++    + G++  A      M   GL PD + Y  +I+G+C    + EA+K+ D M+  G
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              ++V+YNT+L+G C+A  +  A  LF EML +GV P   T+ T+++G  + G  ++A 
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAR 735

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L+  M +      I TY+ ++DGFCK    ++A K++  + S  +  + I++ I+I+G 
Sbjct: 736 ELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGL 795

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G   +A  L+  +   G+ P++V+   I +     G   + D   S M   G  P+S
Sbjct: 796 FKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNS 855

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
              N LI   +    + +A A +SK++ +    +  T +++++ F R+
Sbjct: 856 HMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 214/405 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K   ID       +M+Q+G+ P+ VTY TLI+A C+ G +++A    N M  +G
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    +NSL+ GLC   + ++ +E+  EML  G+ PD   +NT+L   C++  + EA 
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEAR 630

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+ PD++S++TLI       ++D A+     M SAGL P+ V Y  +++GY
Sbjct: 631 RLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGY 690

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A  +  EML KG    V TYNTILNGL R+   +EA +L+  M++       
Sbjct: 691 CKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSI 750

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ ++ G CK+   ++A  +F  +    ++ DI+T+N +IDG  K G  E A  L+A 
Sbjct: 751 CTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAA 810

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +  + P+ ++Y ++       G + E   L+  M   G  P     N +I+     G+
Sbjct: 811 IPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGE 870

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
             +A  +LSK+  +    ++ + + LI+ F REE    A +L  K
Sbjct: 871 IPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEK 915



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 172/343 (50%), Gaps = 48/343 (13%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE---ADDLFNEMLE---RGVFPDFY 241
           +ALK+ DE+L       V   N +L+ + RAK  +    A   FN ML      V PD  
Sbjct: 26  DALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCC 85

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD--------------------------- 274
           T++ +I   C+ G +      F ++ +   + D                           
Sbjct: 86  TYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQ 145

Query: 275 ---------IVTYNTLIDGFCKVGEMEKANKLWADMISRK---ISPNYISYGILINGYCS 322
                    +V+YNTL+ G C     E+A +L   M+  +    SP+ +SY I+ING+ +
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V +A+ L+ EM   G+ P +V+ NTII G C++ +  +A++   +MV +GV P++++
Sbjct: 206 EGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVT 262

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNT+I+G  + + +D A  +  KM ++G+ P  +TYN I+ G C+   +  +E +  +MI
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++G+ PD  TY T+I+G      + +A     +M+ +G  PD+
Sbjct: 323 DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDN 365



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 54/286 (18%)

Query: 249 GHCKDGNM--NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG-------EMEKANKLWA 299
           G  + GN+  + AL LFD +   +    +   N L+    +          + + N++  
Sbjct: 15  GRARSGNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLR 74

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC--- 356
           D  S K++P+  +Y I+I  +C +G +   F  +  ++  G +   +  N ++KG C   
Sbjct: 75  D-CSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTK 133

Query: 357 RSGD---------------------------------ASKADEFLSKMVSEGVD----PD 379
           R G+                                 A +A E L  MV +G D    PD
Sbjct: 134 RVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMV-DGQDSSCSPD 192

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            +SYN +INGF  E  +DKA++L  +M   G+ PDV+TYN I+ G C+   +  +E +  
Sbjct: 193 VVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQ 249

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +M+EKG+ P+  TY T+I+G      +  A     +M+ +G  P +
Sbjct: 250 QMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSN 295


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  316 bits (810), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 154/456 (33%), Positives = 254/456 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  K++ A+    ++   GV P TV Y +LI+  C     ++A +L   M+ +G
Sbjct: 16  LIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN +I+  CK+G  + A +++ +M++ G  PD  TYNT++   C+   + EA 
Sbjct: 76  CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEAL 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM R G  P+  S +T+I    +  ++D+A   F EM++  + PD+  Y I+I+G 
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGL 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA K+   ML+ G     VTYN +++G+C A  L EA +LF  M  +G  P  
Sbjct: 196 AKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF  LI  HCK G M++A  L   MT     PD+VTY+TLI G C +  ++ A  L  D
Sbjct: 256 FTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R+  P  ++   LI+G C  G + EA  +   MV  G  P +V+ NT++ G+CR+G 
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E LS MV+ G+ P+ ++Y  L++G  +   + +A  + ++M++ G  P++ TY  
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           ++ GFC  G++     +   M+  G++PD   Y TL
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471



 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 157/464 (33%), Positives = 255/464 (54%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M ++ V PD+ +Y  LI+   + G L +A  L   +   G+ P    Y SLI+GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A+E+  +M + G  P   TYN ++  SC++  + EA ++  +M   G  PD+V+++T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++    ++G+++ AL+ F EM+  G  P+   +  II G C+   + +A ++  EM  + 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D  +Y  +++GL +A  L EA  LF  ML+ G+ P   T+  +IHG C    +++AL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            LF  M  K  +P   T+N LID  CK G+M++A +L   M      P+ ++Y  LI+G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           CS+  V +A  L  +MV +  KPT+V+ NT+I G C++G   +A E L  MVS G  PD 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YNTL++G  R    ++A  L+S M  +GL P+V+TY  +++G C+  R+ ++  +  +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M   G  P+  TYT LI G  S   +    +   EM+  G  PD
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464



 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 153/489 (31%), Positives = 260/489 (53%), Gaps = 10/489 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC  +  D A+    +M ++G  P  VTYN +I+A C+ G LEEA  L+  M   G
Sbjct: 51  LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDG 110

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN++++GLCK GR + A  + +EM ++G +P+  ++NT+++  C++  + +A 
Sbjct: 111 HVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  R + PD  S+  LI   ++ G+L+ A   FR M  +G+ P  V Y ++I+G 
Sbjct: 171 QVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM 230

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EAL++   M  KGC     T+N +++  C+   + EA  L   M + G  PD 
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDV 290

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI G C    ++ A +L + M ++  KP +VT NTLI G CK G +++A ++   
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 350

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S   SP+ ++Y  L++G+C  G    A  L  +MV +G+ P +V+   ++ G C++  
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A    ++M S G  P+  +Y  LI GF     +D    L  +M   G+ PD + Y  
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRS------TYTTLINGHVSQNNLKEAFRFHD 474
           +    C+ GR   +  IL     +G    RS       Y   ++G +    ++ A  F  
Sbjct: 471 LAAELCKSGRSARALEIL----REGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVR 526

Query: 475 EMLQRGFVP 483
           +M++ G +P
Sbjct: 527 DMVRGGQLP 535



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 192/409 (46%), Gaps = 37/409 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  KID A     EME + + PD+ +Y  LI+   + G L EA++L   M   G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSG 215

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TYN +I+G+C     D A E+   M   G  P   T+N L+   C++  M EA 
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAF 275

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+  G  PD+V++STLI       ++D A     +M      P  V    +I+G 
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA ++ D M+  G   DVVTYNT+++G CRA     A +L ++M+ RG+ P+ 
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T L+ G CK   + +A  +F  M      P++ TY  LI GFC  G+++   KL+ +
Sbjct: 396 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 455

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYE------------------------- 335
           M+   ISP+++ YG L    C  G    A  +  E                         
Sbjct: 456 MVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDA 515

Query: 336 ------------MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
                       MV  G  P    C +++ G C+SG   +A   L +++
Sbjct: 516 GKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 37/235 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +I  A+  L  M   G  PD VTYNTL++ +CR G  E A +L++ M  +G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY +L++GLCK  R   A  V  +M   G +P+  TY  L++  C    +    
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-------------------- 160
           ++F EM   G++PD V + TL     ++G+  RAL   RE                    
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510

Query: 161 -----------------MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
                            M   G +P       ++ G C++G   EA  + +E+++
Sbjct: 511 GLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  316 bits (810), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 166/485 (34%), Positives = 276/485 (56%), Gaps = 21/485 (4%)

Query: 1   MVNALC-KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V ALC +  + ++  +   +M   G  P+ VTYNTL+ A+CR G ++ A +L+  M   
Sbjct: 160 LVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREG 219

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G++P + T+N+++NGLCK GR + A+++ DEM + GL+PD  +YNTL+   C+   + EA
Sbjct: 220 GVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEA 279

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM+++GV PD+V+F++LI    R G L+RA+    +M+  GL  +   +T +I+G
Sbjct: 280 LAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDG 339

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CRNGF+ +AL    EM E      VV YN ++NG C+   + EA +L +EM  +G+ PD
Sbjct: 340 FCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPD 399

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++T++ G+CK G+ + A  L   M +K + PD +TY++LI G C+   +  A +L+ 
Sbjct: 400 VVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFE 459

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+   + P+  +Y  LI+G+C  G+V +A  L  EM+ KG+ P +V+ + +I G  +S 
Sbjct: 460 KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSA 519

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   L K+  E   PD+I Y  L++   R        AL                 
Sbjct: 520 RTKEAQRLLFKLYYEDPVPDNIKYEALMH-CCRTAEFKSVVAL----------------- 561

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             L GF  +G M+ ++ +   M+++    D S Y+ LI+GH    N+ +A  FH ++L+ 
Sbjct: 562 --LKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRC 619

Query: 480 GFVPD 484
           GF P+
Sbjct: 620 GFSPN 624



 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 157/427 (36%), Positives = 245/427 (57%), Gaps = 2/427 (0%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P +  YN+++  L        A+ +L  ML+ G++P+  TYN L+   C +    EA
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 120 EEIFCE-MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
             +  + M   G AP++V+++TL+  F R G++D A      M+  G+ P  V +  ++N
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C+ G + +A KM DEM  +G   D V+YNT+++G C+A  L EA  +F EM ++GV P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  TFT+LIH  C+ GN+ +A+ L   M ++ ++ +  T+  LIDGFC+ G ++ A    
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M   +I P+ + Y +LINGYC +G + EA  L +EM  KG+KP +V+ +TI+ GYC+ 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           GD   A E   KM+ +GV PD+I+Y++LI G   E  +  A  L  KM   GL PD  TY
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++ G C++G +  +  +   MI+KG+ PD  TY+ LI+G       KEA R   ++  
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYY 533

Query: 479 RGFVPDD 485
              VPD+
Sbjct: 534 EDPVPDN 540



 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 143/437 (32%), Positives = 244/437 (55%), Gaps = 15/437 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LCK  +++ A+    EM ++G+ PD V+YNTL++ YC+ G L EA  +   M+ KG
Sbjct: 231 VVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+ SLI+ +C+ G  +RA  ++ +M + GL  +  T+  L+   CR   + +A 
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM    + P +V ++ LI  + + G++D A     EM++ G+ PD V Y+ I++GY
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A ++  +ML+KG V D +TY++++ GLC  + L +A +LF +ML+ G+ PD 
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+TTLI GHCK+GN+ KAL+L D M +K + PD+VTY+ LIDG  K    ++A +L   
Sbjct: 471 FTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFK 530

Query: 301 MISRKISPNYISYGILIN---------------GYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           +      P+ I Y  L++               G+   G + +A +++  M+ +  K   
Sbjct: 531 LYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDG 590

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
              + +I G+CR G+  KA  F  +++  G  P+S S  +L+ G   E    +A  ++ +
Sbjct: 591 SVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQE 650

Query: 406 MENQGLVPDVITYNVIL 422
           + N   + D  T   ++
Sbjct: 651 LLNCCSLADAETSKALI 667



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 158/298 (53%), Gaps = 15/298 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++D A+  + EME KG+ PD VTY+T+++ YC+ G  + AF+L   M  KG
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TY+SLI GLC++ R   A E+ ++MLQ+GL PD  TY TL+   C++ N+ +A 
Sbjct: 431 VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKAL 490

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY------- 173
            +  EM ++GV PD+V++S LI   S++ +   A     ++     VPDN+ Y       
Sbjct: 491 SLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCC 550

Query: 174 --------TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
                     ++ G+   G + +A K+   ML++   +D   Y+ +++G CR   + +A 
Sbjct: 551 RTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKAL 610

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
               ++L  G  P+  +  +L+ G  ++G   +A N+   +       D  T   LID
Sbjct: 611 SFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 150/392 (38%), Positives = 237/392 (60%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK+ K+  AK F+  ME  GV P+ VTYNT+++ YC  G +E A  ++ +M  + 
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  FTY SLI+G+CK+GR + A ++ +EM+Q GL P    YNTL+   C K N+  A 
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM ++G++P + ++++LI       + D A    +E++  G+ PD + Y I+INGY
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR     +A  + DEML  G      TY ++L+ L +   + EADDLF ++   GV PD 
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDV 466

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  LI GHC + N+  A  L   M +  + PD VT+NT++ G C+ G++E+A +L+ +
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P++IS+  LI+GY   G + +AFR+  EM+  G  PT+++ N +++G C++ +
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
              A+E L +MVS+G+ PD  +Y TLI G  +
Sbjct: 587 GDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/459 (34%), Positives = 255/459 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ + C  ++ D A      M++KGV P   T N+L++ + +    E A+ L   M    
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+T+N +IN LCK+G+  +AK+ +  M   G+ P+  TYNT++   C    +  A+
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M R+ + PD  ++ +LI    + G+L+ A   F EM   GL P  V+Y  +I+G+
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A   +DEML+KG    + TYN++++ L   +   EA+ +  E+ E+G+ PD 
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G+C+  N  KA  L D M    IKP   TY +L+    K   M++A+ L+  
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S  + P+ I +  LI+G+CS  +V  AF L  +M    + P  V+ NTI++G+CR G 
Sbjct: 457 ITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E   +M   G+ PD IS+NTLI+G+ R  ++  AF + ++M + G  P V+TYN 
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++ G C+      +E +L  M+ KG+ PD +TY TLI G
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 236/439 (53%), Gaps = 2/439 (0%)

Query: 46  LEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
           + E F+ + +   + G K  +  ++ LI   C   R D A E    M + G+ P   T N
Sbjct: 132 IREIFEFLAASRDRLGFKSSI-VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCN 190

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           +LL    +      A  ++ EM R  +   + +F+ +I +  + G+L +A  +   M+++
Sbjct: 191 SLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS 250

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G+ P+ V Y  I++GYC +G V  A  +   M  +    D  TY ++++G+C+   L EA
Sbjct: 251 GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEA 310

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +F EM+++G+ P    + TLI G C  GN++ A    D M +K I P + TYN+LI  
Sbjct: 311 SKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
                  ++A  +  ++  + ISP+ I+Y ILINGYC   +  +AF L  EM+  GIKPT
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
             +  +++    +     +AD+   K+ SEGV PD I +N LI+G     N+  AF L+ 
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLK 490

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            M+   + PD +T+N I+ G CR+G++ ++  +   M  +G+ PD  ++ TLI+G+  + 
Sbjct: 491 DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG 550

Query: 465 NLKEAFRFHDEMLQRGFVP 483
           ++K+AFR  +EML  GF P
Sbjct: 551 DIKDAFRVRNEMLDTGFNP 569



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 129/258 (50%), Gaps = 35/258 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL  + + D A+  + E+++KG+ PD +TYN LIN YCR    ++AF L + M   G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAK----------------------------------- 85
           +KP   TY SL++ L KK R   A                                    
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAF 486

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           E+L +M +M + PD  T+NT++   CR+  + EA E+F EM RRG+ PD +SF+TLI  +
Sbjct: 487 ELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY 546

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           SR G +  A     EM   G  P  + Y  ++ G C+N     A ++  EM+ KG   D 
Sbjct: 547 SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606

Query: 206 VTYNTILNGLCRAKMLTE 223
            TY T++ G+ +  +  E
Sbjct: 607 TTYFTLIEGIAKVNIPDE 624



 Score = 41.6 bits (96), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 32/66 (48%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM   G  P  +TYN L+   C+    + A +L+  M  KG+ P   TY +LI G+ K  
Sbjct: 561 EMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620

Query: 80  RCDRAK 85
             D  K
Sbjct: 621 IPDENK 626


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  315 bits (808), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 166/484 (34%), Positives = 274/484 (56%), Gaps = 20/484 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC       A   L +M   G  P+ VTYNTL+ A+ R G ++ A +L+  M   G
Sbjct: 196 LVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG 255

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP + T+NS++NG+CK G+ + A++V DEM++ GL+PD  +YNTL+   C+     EA 
Sbjct: 256 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEAL 315

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+++G+ PD+V+F++LI +  + G L+RA+   R+M+  GL  + V +T +I+G+
Sbjct: 316 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGF 375

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ GF+ +AL     M +      VV YN ++NG C    + EA +L +EM  +G+ PD 
Sbjct: 376 CKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 435

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++T+I  +CK+ + + A  L   M +K + PD +TY++LI   C    +  A+ L+ +
Sbjct: 436 VTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKN 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI   + P+  +Y  LI+G+C  G+V  A  L  +MV  G+ P +V+ + +I G  +S  
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A +A + L K+  E   P +  Y+ L++   R+  +    AL                  
Sbjct: 556 AMEAQQLLFKLYHEDPIPANTKYDALMH-CCRKAELKSVLAL------------------ 596

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            L GFC +G M++++ +   M+++  N D S Y+ LI+GH    N+ +A  FH +MLQ G
Sbjct: 597 -LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGG 655

Query: 481 FVPD 484
           F P+
Sbjct: 656 FAPN 659



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 134/390 (34%), Positives = 227/390 (58%), Gaps = 1/390 (0%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G  P    YN +L+ +    +++ A   F  M   GVAP++ +++ L+      G    A
Sbjct: 151 GYVPSVLAYNAVLL-ALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
           L   R+M+ AG  P+ V Y  ++  + R G V  A ++   M E G   ++VT+N+++NG
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           +C+A  + +A  +F+EM+  G+ PD  ++ TL+ G+CK G  ++AL++F  MTQK I PD
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
           +VT+ +LI   CK G +E+A  L   M  R +  N +++  LI+G+C  G + +A     
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
            M    IKP++V  N +I GYC  G   +A E L +M ++G+ PD ++Y+T+I+ + +  
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           +   AF L  +M  +G++PD ITY+ ++   C + R+ D+ ++   MI+ GL PD  TYT
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +LI+GH  + N++ A   HD+M++ G +PD
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPD 539



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 241/463 (52%), Gaps = 50/463 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN +CK  K++ A+    EM ++G+ PD V+YNTL+  YC+ G   EA  +   M+ KG
Sbjct: 266 MVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+ SLI+ +CK G  +RA  ++ +M + GL  +  T+  L+   C+K  + +A 
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M +  + P +V ++ LI  +   G++D A     EM++ GL PD V Y+ II+ Y
Sbjct: 386 LAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+N     A ++  +MLEKG + D +TY++++  LC  K L++A  LF  M++ G+ PD 
Sbjct: 446 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDE 505

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG---------------- 284
           +T+T+LI GHCK+GN+  AL+L D M +  + PD+VTY+ LI+G                
Sbjct: 506 FTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFK 565

Query: 285 ----------------------------------FCKVGEMEKANKLWADMISRKISPNY 310
                                             FC  G M +A+K++  M+ R  + + 
Sbjct: 566 LYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDG 625

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
             Y +LI+G+C  G+V +A     +M+  G  P   S  ++I+G   +G   +AD+ + +
Sbjct: 626 SVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQ 685

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           +++     D+ +   LI+  + E N+D    ++  M   GL+P
Sbjct: 686 LLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  315 bits (808), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 161/482 (33%), Positives = 280/482 (58%), Gaps = 20/482 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    +D A  F   ME+KG  P+ VTYNTLI+ YC+   +++ F+L+ SM+ KG
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG 270

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P + +YN +INGLC++GR      VL EM + G S D  TYNTL+   C++ N  +A 
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL 330

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM R G++P ++++++LI    + G ++RA  +  +M+  GL P+   YT +++G+
Sbjct: 331 VMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGF 390

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G++ EA ++  EM++ G    VVTYN ++NG C A  + +A  +  +M E+G+ PD 
Sbjct: 391 SQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDV 450

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++T++ G C+  ++++AL +   M  K IKPD +TY++LI GFC+    ++A  L+ +
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDE 510

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P+  +Y  LIN YC  G + +A +L  EMV KG+ P +V+ + +I G  +   
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQAR 570

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L K+  E   P  ++Y+TLI      EN        S +E + +V        
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLI------EN-------CSNIEFKSVVS------- 610

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC +G M +++ +   M+EK   PD + Y  +I+GH    ++++A+  + EM++ G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSG 670

Query: 481 FV 482
           F+
Sbjct: 671 FL 672



 Score =  301 bits (771), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 156/455 (34%), Positives = 254/455 (55%), Gaps = 1/455 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR-CDRAKEVLDEM 91
           ++ ++ +Y R   +++A  +++     G  PGV +YN++++   +  R    A+ V  EM
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           LQ  +SP+  TYN L+   C   N+  A   F  M ++G  P++V+++TLI  + +  ++
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D      R M   GL P+ + Y ++ING CR G + E   +  EM ++G  +D VTYNT+
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTL 316

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           + G C+     +A  +  EML  G+ P   T+T+LIH  CK GNMN+A    D M  + +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGL 376

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P+  TY TL+DGF + G M +A ++  +MI    SP+ ++Y  LING+C  G + +A  
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +  +M  KG+ P +VS +T++ G+CRS D  +A     KMV++G+ PD+I+Y++LI GF 
Sbjct: 437 VLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC 496

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
            +    +A  L  +M   GL PD  TY  ++  +C +G +  +  +   M+EKG+ PD  
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVV 556

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           TY+ LING   Q   +EA R   ++     VP D 
Sbjct: 557 TYSVLINGLNKQARTREAKRLLLKLFYEESVPSDV 591



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 193/349 (55%), Gaps = 36/349 (10%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM-LTEADDLFNE 230
           ++ +++  Y R   + +AL +       G +  V++YN +L+   R+K  ++ A+++F E
Sbjct: 136 VFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           ML+  V P+ +T+  LI G C  GN++ AL  FD M +K   P++VTYNTLIDG+CK+ +
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRK 255

Query: 291 MEKANKLWADMISRKISPNYISYGILIN-------------------------------- 318
           ++   +L   M  + + PN ISY ++IN                                
Sbjct: 256 IDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNT 315

Query: 319 ---GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
              GYC  G+  +A  +  EM+  G+ P++++  ++I   C++G+ ++A EFL +M   G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           + P+  +Y TL++GF ++  M++A+ ++ +M + G  P V+TYN ++ G C  G+M D+ 
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAI 435

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +L  M EKGL PD  +Y+T+++G     ++ EA R   +M+ +G  PD
Sbjct: 436 AVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPD 484



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 50/352 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++++CK   ++ A  FL +M  +G+ P+  TY TL++ + ++G++ EA++++  M   G
Sbjct: 351 LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+LING C  G+   A  VL++M + GL+PD  +Y+T+L   CR  ++ EA 
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  +G+ PD +++S+LI  F    +   A   F EM   GL PD   YT +IN Y
Sbjct: 471 RVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAY 530

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL------------------------- 215
           C  G + +A+++ +EM+EKG + DVVTY+ ++NGL                         
Sbjct: 531 CMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSD 590

Query: 216 -------------------------CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
                                    C   M+TEAD +F  MLE+   PD   +  +IHGH
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGH 650

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           C+ G++ KA +L+  M +       VT   L+    K G++ + N + A+++
Sbjct: 651 CRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVL 702



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 15/184 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLI---------------NAYCREGF 45
           ++N L K  +   AK  L ++  +   P  VTY+TLI                 +C +G 
Sbjct: 561 LINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           + EA Q+  SM  K  KP    YN +I+G C+ G   +A  +  EM++ G    T T   
Sbjct: 621 MTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIA 680

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+    ++  ++E   +   + R     +      L+ I  R G +D  L    EM   G
Sbjct: 681 LVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740

Query: 166 LVPD 169
            +P+
Sbjct: 741 FLPN 744


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  315 bits (808), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 274/449 (61%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC  H +      L ++ + G  P  +T+NTLIN  C EG + EA + ++ +  +G
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V+T+  ++NGLCK G+   A   + +M+++   P+  +Y+ ++   C+   ++EA 
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   G++P +V++++LI     +GQ  +A + F+EM    + PD V ++I+++  
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G VLEAL +  +M++     D+VTY+++++G+C++ +  E+  L NEML R + PD 
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+  +   CK G +++A ++ ++M ++ ++P++VTYN+L+DG+C   +M++A K++  
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+++  +P+ +SY ILI GYC    + EA +L+ EM  KG+ P  ++  T+I G C++G 
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E   KM S G  PD I+Y+TL++GF +  ++D+A AL   ++   L P+ +   +
Sbjct: 505 PYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKI 564

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           +L G C+ G++ D++ +   +  + L PD
Sbjct: 565 LLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 255/473 (53%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D A  +  +M     +P    +N L+ A  R    +    +   M   G+   V+T   L
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           IN LC          VL ++ ++G  P   T+NTL+   C +  + EA E    +  RG 
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P + + + ++    + G+   A+++ ++M      P+ V Y+III+  C+N  V EA+ 
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +   M   G    VVTYN+++ G+C +    +A  LF EMLE  + PD  TF+ L+   C
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K+G + +AL++F  M Q +++PDIVTY++LI G CK    ++++ L  +M+SR I P+ +
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           ++ I ++ +C  G V+EA  +   M+ +G++P +V+ N+++ GYC      +A +    M
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM 445

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           V++G  PD +SYN LI G+ + E +D+A  L  +M ++GL P+ IT+  +++G C+ GR 
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRP 505

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + ++ +  +M   G  PD  TY+TL++G     +L EA    + + +    P+
Sbjct: 506 YAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPN 558



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 199/371 (53%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
            N  +A   F +M      P I  F+ L+    R    D  +  +R+M+  G+       
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           TI+IN  C    V     +  ++ + G    ++T+NT++NGLC    + EA +  + ++ 
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           RG  P  YT T +++G CK G  + A+     M +   +P++V+Y+ +ID  CK   + +
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNE 262

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L+  M S  ISP  ++Y  LI G C+ G   +A  L+ EM+   +KP +V+ + ++ 
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C+ G   +A     KM+   ++PD ++Y++LI+G  +     ++  L+++M ++ + P
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           DV+T+++ +  FC++G + +++ I+  MIE+GL P+  TY +L++G+   + + EA +  
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442

Query: 474 DEMLQRGFVPD 484
           D M+ +G  PD
Sbjct: 443 DIMVNKGCAPD 453



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 67/163 (41%)

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
           S  +  +A   + +MV     P +   N ++    R            KM   GV     
Sbjct: 81  SFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVY 140

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +   LIN       +   F+++ K+   G  P +IT+N ++ G C +GR+ ++   L  +
Sbjct: 141 TLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYI 200

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + +G  P   T+T ++NG         A  +  +M++    P+
Sbjct: 201 MSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPE 243


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  315 bits (808), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 150/392 (38%), Positives = 237/392 (60%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK+ K+  AK F+  ME  GV P+ VTYNT+++ YC  G +E A  ++ +M  + 
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  FTY SLI+G+CK+GR + A ++ +EM+Q GL P    YNTL+   C K N+  A 
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM ++G++P + ++++LI       + D A    +E++  G+ PD + Y I+INGY
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR     +A  + DEML  G      TY ++L+ L +   + EADDLF ++   GV PD 
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDA 466

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  LI GHC + N+  A  L   M +  + PD VT+NT++ G C+ G++E+A +L+ +
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P++IS+  LI+GY   G + +AFR+  EM+  G  PT+++ N +++G C++ +
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
              A+E L +MVS+G+ PD  +Y TLI G  +
Sbjct: 587 GDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/459 (34%), Positives = 255/459 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ + C  ++ D A      M++KGV P   T N+L++ + +    E A+ L   M    
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+T+N +IN LCK+G+  +AK+ +  M   G+ P+  TYNT++   C    +  A+
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M R+ + PD  ++ +LI    + G+L+ A   F EM   GL P  V+Y  +I+G+
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A   +DEML+KG    + TYN++++ L   +   EA+ +  E+ E+G+ PD 
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G+C+  N  KA  L D M    IKP   TY +L+    K   M++A+ L+  
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S  + P+ I +  LI+G+CS  +V  AF L  +M    + P  V+ NTI++G+CR G 
Sbjct: 457 ITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E   +M   G+ PD IS+NTLI+G+ R  ++  AF + ++M + G  P V+TYN 
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++ G C+      +E +L  M+ KG+ PD +TY TLI G
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 237/439 (53%), Gaps = 2/439 (0%)

Query: 46  LEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
           + E F+ + +   + G K  +  ++ LI   C   R D A E    M + G+ P   T N
Sbjct: 132 IREIFEFLAASRDRLGFKSSI-VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCN 190

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           +LL    +      A  ++ EM R  +   + +F+ +I +  + G+L +A  +   M+++
Sbjct: 191 SLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS 250

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G+ P+ V Y  I++GYC +G V  A  +   M  +    D  TY ++++G+C+   L EA
Sbjct: 251 GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEA 310

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +F EM+++G+ P    + TLI G C  GN++ A    D M +K I P + TYN+LI  
Sbjct: 311 SKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
                  ++A  +  ++  + ISP+ I+Y ILINGYC   +  +AF L  EM+  GIKPT
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
             +  +++    +     +AD+   K+ SEGV PD+I +N LI+G     N+  AF L+ 
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLK 490

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            M+   + PD +T+N I+ G CR+G++ ++  +   M  +G+ PD  ++ TLI+G+  + 
Sbjct: 491 DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG 550

Query: 465 NLKEAFRFHDEMLQRGFVP 483
           ++K+AFR  +EML  GF P
Sbjct: 551 DIKDAFRVRNEMLDTGFNP 569



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 129/258 (50%), Gaps = 35/258 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL  + + D A+  + E+++KG+ PD +TYN LIN YCR    ++AF L + M   G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAK----------------------------------- 85
           +KP   TY SL++ L KK R   A                                    
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAF 486

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           E+L +M +M + PD  T+NT++   CR+  + EA E+F EM RRG+ PD +SF+TLI  +
Sbjct: 487 ELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY 546

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           SR G +  A     EM   G  P  + Y  ++ G C+N     A ++  EM+ KG   D 
Sbjct: 547 SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606

Query: 206 VTYNTILNGLCRAKMLTE 223
            TY T++ G+ +  +  E
Sbjct: 607 TTYFTLIEGIAKVNIPDE 624



 Score = 41.6 bits (96), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCR--EGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           EM   G  P  +TYN L+   C+  EG L E  +L+  M  KG+ P   TY +LI G+ K
Sbjct: 561 EMLDTGFNPTVLTYNALVQGLCKNQEGDLAE--ELLKEMVSKGMTPDDTTYFTLIEGIAK 618

Query: 78  KGRCDRAK 85
               D  K
Sbjct: 619 VNIPDENK 626


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  315 bits (808), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 157/487 (32%), Positives = 276/487 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K       + F  +M   G+ P   TYN +I+  C+EG LE + +L   M   G
Sbjct: 260 LLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 319

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TYNSLI+G  K G  +    + +EM  +G  PD  TYN L+   C+ E M  A 
Sbjct: 320 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 379

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E F EM   G+ P++V++STLI  F + G +  A+  F +M+  GL+P+   YT +I+  
Sbjct: 380 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDAN 439

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA K+ ++ML+ G  +++VTY  +L+GLC+A  + EA+++F  ML+ G+ P+ 
Sbjct: 440 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 499

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T L+HG+ K   M  A+ +   MT+ +IKPD++ Y ++I G C   ++E+   +  +
Sbjct: 500 QVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE 559

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR IS N +    +I+ Y   G  ++A   + EM   G++ T+V+   +I G C++G 
Sbjct: 560 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGI 619

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A ++  +M+S G+ P+   Y +LI+G  +   ++ A  L  +M+ +G+ PD+  +  
Sbjct: 620 VELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTA 679

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + G + ++ +++ RM E  +  D   YT+L++G      L +A +F +EM+++G
Sbjct: 680 LIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 739

Query: 481 FVPDDAF 487
            +P++  
Sbjct: 740 ILPEEVL 746



 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 241/453 (53%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            ++ L + +   G LEEA +  + M      P   + N L++ L K G     ++  ++M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           +  G++P   TYN ++   C++ ++  +  +F +M   G++PD+V++++LI  + + G L
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           +     F EMK  G VPD + Y  +IN YC+   +  A +   EM   G   +VVTY+T+
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++  C+  M+  A  LF +M   G+ P+ +T+T+LI  +CK GN+ +A  L + M Q  +
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           K +IVTY  L+DG CK G M +A +++  M+   ISPN   Y  L++GY     + +A +
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 520

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +  +M    IKP L+   +II G+C      +    L +M S G+  + +   T+I+ + 
Sbjct: 521 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 580

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +      A     +M++ G+   ++TY V++ G C+ G +  +     RM+  GL P+ +
Sbjct: 581 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVA 640

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            YT+LI+G    N ++ A +  DEM  RG  PD
Sbjct: 641 VYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPD 673



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 251/486 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK+  +++++    +M + G+ PD VTYN+LI+ Y + G LEE   L N M   G
Sbjct: 295 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 354

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN LIN  CK  +  RA E   EM   GL P+  TY+TL+   C++  M  A 
Sbjct: 355 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAI 414

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M R G+ P+  ++++LI    + G L  A     +M  AG+  + V YT +++G 
Sbjct: 415 KLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 474

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA ++   ML+ G   +   Y  +++G  +A+ + +A  +  +M E  + PD 
Sbjct: 475 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 534

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + ++I GHC    + +   + + M  + I  + V   T+ID + K G+   A   + +
Sbjct: 535 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 594

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +    ++Y +LI+G C  G V  A   +  M+  G++P +    ++I G C++  
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   +M   G+ PD  ++  LI+G ++  N+ +A  L+S+M    +  D+  Y  
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 714

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++GF + G +H +      MIEKG+ P+      L+  +  +  L EA    +EM + G
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774

Query: 481 FVPDDA 486
            + + A
Sbjct: 775 LITESA 780



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 228/417 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  K+  A  +  EM+  G+ P+ VTY+TLI+A+C+EG ++ A +L   M   G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  FTY SLI+  CK G    A ++L++MLQ G+  +  TY  LL   C+   M EAE
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M + G++P+   ++ L+  + +  +++ A+   ++M    + PD +LY  II G+
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + E   + +EM  +G   + V   TI++   +A   ++A + F EM + GV    
Sbjct: 545 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 604

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK G +  A++ F  M    ++P++  Y +LIDG CK   +E A KL+ +
Sbjct: 605 VTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDE 664

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R ++P+  ++  LI+G    G++ EA  L   M    I+  L    +++ G+ + G+
Sbjct: 665 MQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGE 724

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
             +A +F ++M+ +G+ P+ +    L+  + +   +D+A  L ++ME  GL+ +  T
Sbjct: 725 LHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 233/433 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM+  G  PD +TYN LIN YC+   +  AF+  + M   GLKP V TY++LI+  CK+G
Sbjct: 349 EMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEG 408

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
               A ++  +M + GL P+  TY +L+  +C+  N++EA ++  +M + GV  +IV+++
Sbjct: 409 MMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT 468

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            L+    + G++  A   FR M   G+ P+  +YT +++GY +   + +A+K+  +M E 
Sbjct: 469 ALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC 528

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               D++ Y +I+ G C  + L E   +  EM  RG+  +    TT+I  + K G  + A
Sbjct: 529 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 588

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           LN F  M    ++  IVTY  LIDG CK G +E A   +  M+S  + PN   Y  LI+G
Sbjct: 589 LNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 648

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C    +  A +L+ EM  +G+ P + +   +I G  + G+  +A   +S+M    ++ D
Sbjct: 649 LCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFD 708

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              Y +L++GF +   + +A    ++M  +G++P+ +    +L  + ++G++ ++  +  
Sbjct: 709 LHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKN 768

Query: 440 RMIEKGLNPDRST 452
            M   GL  + +T
Sbjct: 769 EMERMGLITESAT 781



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 152/319 (47%), Gaps = 35/319 (10%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV     ++ + +      +L EA++ F+ M      P   +   L+H   K GN     
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 274

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             F+ M    I P + TYN +ID  CK G++E + +L+  M    +SP+ ++Y  LI+GY
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G + E   L+ EM   G  P +++ N +I  YC+     +A E+ S+M + G+ P+ 
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVP--------------------------- 413
           ++Y+TLI+ F +E  M  A  L   M   GL+P                           
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 414 --------DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
                   +++TY  +L G C+ GRM ++E +   M++ G++P++  YT L++G++    
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +++A +   +M +    PD
Sbjct: 515 MEDAMKILKQMTECNIKPD 533



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 146/295 (49%), Gaps = 21/295 (7%)

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERG----------VFPDFYT-----------FTT 245
           +Y  I++ + RA+M T+A D   E++             +F   ++           F  
Sbjct: 165 SYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDV 224

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L     + G + +A   F  M      P   + N L+    K G  +   K + DMI   
Sbjct: 225 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 284

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I+P+  +Y ++I+  C  G +  + RL+ +M   G+ P +V+ N++I GY + G   +  
Sbjct: 285 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 344

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
              ++M   G  PD I+YN LIN + + E M +AF   S+M+N GL P+V+TY+ ++  F
Sbjct: 345 SLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 404

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           C++G M  +  +   M   GL P+  TYT+LI+ +    NL EA++  ++MLQ G
Sbjct: 405 CKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  315 bits (807), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 165/485 (34%), Positives = 275/485 (56%), Gaps = 20/485 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC       A   L +M   G  P+ VTYNTL+ A+ R G ++ A +L+  M   G
Sbjct: 156 LIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG 215

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP + T+NS++NG+CK G+ + A++V DEM++ GL+PD  +YNTL+   C+     EA 
Sbjct: 216 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEAL 275

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+++G+ PD+V+F++LI +  + G L+ A+   R+M+  GL  + V +T +I+G+
Sbjct: 276 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGF 335

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ GF+ +AL     M +      VV YN ++NG C    + EA +L +EM  +G+ PD 
Sbjct: 336 CKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 395

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++T+I  +CK+ + + A  L   M +K + PD +TY++LI   C+   +  A+ L+ +
Sbjct: 396 VTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKN 455

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI   + P+  +Y  LI+G+C  G+V  A  L  +MV  G+ P +V+ + +I G  +S  
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A +A + L K+  E   P +  Y+ L++   R+  +    AL                  
Sbjct: 516 AMEAQQLLFKLYHEEPIPANTKYDALMH-CCRKAELKSVLAL------------------ 556

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            L GFC +G M++++ +   M+++  N D S Y+ LI+GH    N+ +A  FH +MLQRG
Sbjct: 557 -LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615

Query: 481 FVPDD 485
           F P+ 
Sbjct: 616 FAPNS 620



 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 135/390 (34%), Positives = 227/390 (58%), Gaps = 1/390 (0%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G  P    YN +L+ +    +++ A   F  M   GVAP++ +++ LI      G    A
Sbjct: 111 GYVPSVLAYNAVLL-ALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
           L   R+M+ AG  P+ V Y  ++  + R G V  A ++   ML+ G   ++VT+N+++NG
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           +C+A  + +A  +F+EM+  G+ PD  ++ TL+ G+CK G  ++AL++F  MTQK I PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
           +VT+ +LI   CK G +E A  L   M  R +  N +++  LI+G+C  G + +A     
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
            M    IKP++V  N +I GYC  G   +A E L +M ++G+ PD ++Y+T+I+ + +  
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           +   AF L  +M  +G++PD ITY+ ++   C + R+ D+ ++   MI+ GL PD  TYT
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +LI+GH  + N++ A   HD+M++ G +PD
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPD 499


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  315 bits (807), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 161/484 (33%), Positives = 270/484 (55%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC+   I  +   L ++ ++G+  +  T N  I   C  G LEEA  L+ SM    
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+L+ GLCK  +   A + L  M+  G  PD  TYNT++   C+++ + EA 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +   +G  PD V++ +LI      G ++RAL  F E ++  L PD V+Y  ++ G 
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +L AL++ +EM+E GC  D+ TYN ++NGLC+   +++A  + N+ + +G  PD 
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF T+I G+CK   ++ AL L + M    I PD +TYN++++G CK G+ ++ N+ + +
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +   PN I+Y ILI  +C +  + EA  +   M   G+ P  +S NT+I G+CR+GD
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGD 479

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     K+  +G    + ++N LI  +  + NM  A  +  +M ++G  PD+ TY V
Sbjct: 480 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRV 539

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+   +  + + L  M+ KG  P  +T+  ++N     + + EA      M++ G
Sbjct: 540 LVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMG 599

Query: 481 FVPD 484
            VP+
Sbjct: 600 VVPE 603



 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 159/478 (33%), Positives = 265/478 (55%), Gaps = 2/478 (0%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           H  D+  +F  EM ++ V+PD  T+N +++A C++G + E+  L+  +  +G+    FT 
Sbjct: 95  HGYDARHLFD-EMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTC 153

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N  I GLC+ GR + A  +++ M    ++PD  TYNTL+   C+   + EA +    M  
Sbjct: 154 NIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMN 212

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           +G  PD  +++T+I  + +   L  A    ++    G VPD V Y  +ING C  G V  
Sbjct: 213 QGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVER 272

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           AL++ +E   K    D+V YN+++ GLCR  ++  A  + NEM+E G  PD +T+  +I+
Sbjct: 273 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVIN 332

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G CK GN++ A  + +    K   PD+ T+NT+IDG+CK  +++ A +L   M    I+P
Sbjct: 333 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAP 392

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + I+Y  ++NG C  G   E    + EM+ KG +P  ++ N +I+ +C+     +A   +
Sbjct: 393 DAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 452

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M  +G+ PD+IS+NTLI+GF R  ++D A+ L  K++ +G      T+N+++  +  +
Sbjct: 453 VRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 512

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             M  +E I   MI KG  PD  TY  L++G     N+  A+    EM+ +GFVP  A
Sbjct: 513 LNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMA 570



 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 152/518 (29%), Positives = 268/518 (51%), Gaps = 34/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL      D A      M   GV PD  T+   I ++C  G    A +L+ S+  +G
Sbjct: 16  IMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                  Y +++ GL   G    A+ + DEML+  + PD AT+N +L   C+K ++ E+ 
Sbjct: 76  CDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESG 135

Query: 121 EIFCEMSRRG----------------------------------VAPDIVSFSTLIGIFS 146
            +  ++ +RG                                  +APD+V+++TL+    
Sbjct: 136 ALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLC 195

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           ++ ++  A  Y R M + G +PD+  Y  II+GYC+   + EA ++  + + KG V D V
Sbjct: 196 KDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRV 255

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TY +++NGLC    +  A +LFNE   + + PD   + +L+ G C+ G +  AL + + M
Sbjct: 256 TYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 315

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            +    PDI TYN +I+G CK+G +  A  +  D I +   P+  ++  +I+GYC    +
Sbjct: 316 VEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKL 375

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A +L   M   GI P  ++ N+++ G C++G A + +E   +M+ +G  P++I+YN L
Sbjct: 376 DSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 435

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I  F +   +++A  ++ +M   GLVPD I++N ++ GFCR G +  + L+  ++ EKG 
Sbjct: 436 IENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGY 495

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +    T+  LI  + S+ N++ A +   EM+ +G+ PD
Sbjct: 496 SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 533



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 251/471 (53%), Gaps = 6/471 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCKD K+  A  +L  M  +G  PD  TYNT+I+ YC+   L+EA +L+     KG
Sbjct: 190 LMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKG 249

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY SLINGLC +G  +RA E+ +E     L PD   YN+L+   CR+  +  A 
Sbjct: 250 FVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 309

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G  PDI +++ +I    + G +  A +   +    G +PD   +  +I+GY
Sbjct: 310 QVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGY 369

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  AL++ + M   G   D +TYN++LNGLC+A    E ++ F EM+ +G  P+ 
Sbjct: 370 CKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 429

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   CK   + +A  +   M+Q  + PD +++NTLI GFC+ G+++ A  L+  
Sbjct: 430 ITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQK 489

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  S    ++ ILI  Y S  ++  A +++ EM+ KG KP L +   ++ G C++ +
Sbjct: 490 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAAN 549

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L++MVS+G  P   ++  ++N       + +A A++  M   G+VP+V+  + 
Sbjct: 550 VDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV--DT 607

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           IL+    +  +   ++++  +++KG +    TY  L  G V  N L    R
Sbjct: 608 ILS--TDKKEIAAPKILVEELMKKG-HISYPTYEVLHEG-VRDNKLTRKAR 654



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 204/424 (48%), Gaps = 34/424 (8%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G  P    YN ++          +A +++  M   GVAPD  + +  I  F   G+   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
           L   R +   G     + Y  ++ G   +G   +A  + DEML +    DV T+N +L+ 
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 215 LCRAKMLTEADDLFNEMLERG----------------------------------VFPDF 240
           LC+   + E+  L  ++L+RG                                  + PD 
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDV 184

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TL+ G CKD  + +A      M  +   PD  TYNT+IDG+CK   +++A +L  D
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            I +   P+ ++Y  LING C+ G V  A  L+ E   K +KP LV  N+++KG CR G 
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 304

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A + +++MV +G  PD  +YN +ING  +  N+  A  +++    +G +PDV T+N 
Sbjct: 305 ILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 364

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G+C++ ++  +  ++ RM   G+ PD  TY +++NG       KE     +EM+ +G
Sbjct: 365 MIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKG 424

Query: 481 FVPD 484
             P+
Sbjct: 425 CRPN 428



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%)

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G  P + +YN +++  V     D+A  +  +M + G+ PD  T+ V +  FC  GR H +
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +L  + E+G +     Y T++ G  +  +  +A    DEML+R   PD A
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVA 116


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  315 bits (806), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 171/519 (32%), Positives = 285/519 (54%), Gaps = 35/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+NA CK H+ D A     +ME+ GV P+ VTYN +I+  C+ G L+EA++    M  + 
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY+  INGL K  + D A  VL EM ++G  P+   YNTL+   C+  N+SEA 
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA-------------------------- 154
           +I  +M  +G++P+ V+ ++LI  F ++ Q+ +A                          
Sbjct: 382 KIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWL 441

Query: 155 ---------LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                    L + REM    L P++ L T +++G C+ G   EA+++   +L KG V ++
Sbjct: 442 CLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNI 501

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT N +++GLC+A  + E   L  +MLERG+  D  T+ TLI G CK+G + +   L + 
Sbjct: 502 VTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEE 561

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +K I+PDI T+N L+ G C   ++++A++LW +       PN  +YG++I+GYC    
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V E   L  E+V K ++   V  N++I+ YC +G+ + A      M S GV     +Y++
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++G      +D A  L+ +M  +GL+P+V+ Y  I+ G+ + G+M+   ++L  M    
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++P++ TYT +I+G       KEA +  +EM ++G +PD
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPD 780



 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 157/475 (33%), Positives = 263/475 (55%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N L K  KID A   L EM + G  P+ V YNTLI+ YC+ G + EA ++ + M  KG+
Sbjct: 333 INGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGI 392

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P   T NSLI G CK  +  +A+ VL+EM+  GL  +  +++ ++   C K     A  
Sbjct: 393 SPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALH 452

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
              EM  R + P+    +TL+    + G+   A+  +  +   G VP+ V    +I+G C
Sbjct: 453 FIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLC 512

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G + E LK+  +MLE+G V D +TYNT+++G C+   + E  +L  EM+++G+ PD Y
Sbjct: 513 KAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIY 572

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           TF  L+HG C    +++A  L+    +    P++ TY  +IDG+CK  ++E+   L  ++
Sbjct: 573 TFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNEL 632

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +S+K+  N + Y  LI  YC  G++  AFRL  +M  +G+  +  + ++++ G C  G  
Sbjct: 633 VSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLV 692

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A   L +M  EG+ P+ + Y T+I G+ +   M+K   ++ +M +  + P+  TY ++
Sbjct: 693 DDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIM 752

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           + GFC+ G+  ++  +L  M EKG+ PD  TY    NG   +  ++EAF+  DEM
Sbjct: 753 IDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEM 807



 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 259/462 (56%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           + +KG++P   T   L+++  +   L++++++ + +   G+ P V  ++++IN  CK  R
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A  +  +M ++G++P+  TYN ++   C+   + EA     +M +  V+P ++++S 
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSV 331

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I    +  ++D A    +EM   G VP+ V+Y  +I+GYC+ G + EALK+RD+ML KG
Sbjct: 332 FINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              + VT N+++ G C++  + +A+++  EM+ RG+  +  +F+ +I+  C       AL
Sbjct: 392 ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTAL 451

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +    M  ++++P+     TL+ G CK G+  +A +LW  ++ +   PN ++   LI+G 
Sbjct: 452 HFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGL 511

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G++ E  +L  +M+ +G+    ++ NT+I G C+ G   +  E   +MV +G+ PD 
Sbjct: 512 CKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDI 571

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            ++N L++G    + +D+A  L  + +  G VP+V TY V++ G+C+  ++ + E +L  
Sbjct: 572 YTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNE 631

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           ++ K L  +   Y +LI  +    N+  AFR  D+M  RG +
Sbjct: 632 LVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVL 673



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 224/401 (55%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A +V   + + GL P   T   LL    +   + ++ E++  +   G+ PD+  FST+I 
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            F +  + D A+  F +M+  G+ P+ V Y  II+G C++G + EA + +++M+++    
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
            ++TY+  +NGL + + + EA+ +  EM E G  P+   + TLI G+CK GN+++AL + 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D M  K I P+ VT N+LI GFCK  ++ +A  +  +MI R +  N  S+ ++IN  C  
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
                A     EM+ + ++P      T++ G C++G   +A E   +++ +G  P+ ++ 
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS 504

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N LI+G  +  NM +   L+  M  +GLV D ITYN +++G C++G++ +   +   M++
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           KG+ PD  T+  L++G  + + + EA R   E  + G+VP+
Sbjct: 565 KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPN 605



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 144/264 (54%)

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A D+F+ + ++G+FP   T T L+    K   + K+  ++D +    I PD+  ++T+I+
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
            FCK    + A  L++ M    ++PN ++Y  +I+G C  G + EA+R   +MV + + P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           +L++ +  I G  +     +A+  L +M   G  P+ + YNTLI+G+ +  N+ +A  + 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
             M ++G+ P+ +T N ++ GFC+  ++  +E +L  MI +GL  ++ +++ +IN    +
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 464 NNLKEAFRFHDEMLQRGFVPDDAF 487
                A  F  EML R   P+D  
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGL 468


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  315 bits (806), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 173/523 (33%), Positives = 280/523 (53%), Gaps = 38/523 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C+   +  A+  L  M++ GV P   TYNTL++AY R G++++A +++ +M+  G
Sbjct: 245 LLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG 304

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRK-ENMSE 118
            +P ++TYN L  GLC+ G+ D A  + DEM ++G L PD  TYNTL  ++C K    S+
Sbjct: 305 FEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTL-ADACFKCRCSSD 363

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  EM  +GV   +V+ + +I    ++G+L+ AL    +M   GL PD + Y  +I+
Sbjct: 364 ALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIH 423

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            +C+ G + +A  + DEM+ +G  +D  T NT+L  LC+ K   EA  L     +RG  P
Sbjct: 424 AHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMP 483

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  ++ T++  + K+ N   AL L+D M +K + P I TYNTLI G  ++G +++A    
Sbjct: 484 DEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKL 543

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +++ + + P+  +Y I+I+ YC  G +  AF+   +MV    KP +V+CNT++ G C +
Sbjct: 544 NELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLN 603

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA +     V +G   D I+YNTLI    ++ ++D A    + ME +GL PD  TY
Sbjct: 604 GKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTY 663

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGL-------------------------------- 446
           NV+L+     GR  +++ +L ++ E G                                 
Sbjct: 664 NVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVE 723

Query: 447 NPDRS---TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           NP  S    YT L+NG  +    KEA    DEM+Q+G   D +
Sbjct: 724 NPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSS 766



 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 152/460 (33%), Positives = 249/460 (54%), Gaps = 1/460 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           ++P+  T+N L++ +C +G L +A   +++M G GL P   TYN+L+N  C+KG    A+
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L  M + G++P   TYNTL+    R   + +A ++   M+  G  PD+ +++ L    
Sbjct: 260 ALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGL 319

Query: 146 SRNGQLDRALMYFREMKSAG-LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
            + G++D A     EM+  G L+PD V Y  + +   +     +AL++ +EM EKG    
Sbjct: 320 CQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKAT 379

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +VT+N ++ GLC+   L  A    N+M + G+ PD  T+ TLIH HCK GN+ KA  L D
Sbjct: 380 LVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMD 439

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M ++ +K D  T NT++   CK    E+A  L      R   P+ +SYG ++  Y    
Sbjct: 440 EMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEY 499

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           +   A RLW EM+ K + P++ + NT+IKG  R G   +A + L++++ +G+ PD  +YN
Sbjct: 500 NSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYN 559

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            +I+ + +E +++ AF   +KM      PDV+T N ++ G C  G++  +  +    +EK
Sbjct: 560 IIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEK 619

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G   D  TY TLI       ++  A  F  +M  RG  PD
Sbjct: 620 GKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPD 659



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/465 (32%), Positives = 239/465 (51%), Gaps = 1/465 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG-VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +   LC+  K+D A     EME+ G + PD VTYNTL +A  +     +A +L+  M  K
Sbjct: 315 LAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREK 374

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+K  + T+N +I GLCK G  + A   L++M   GL+PD  TYNTL+   C+  N+++A
Sbjct: 375 GVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKA 434

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM RRG+  D  + +T++    +  + + A    +     G +PD V Y  ++  
Sbjct: 435 YTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAA 494

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y +      AL++ DEM+EK     + TYNT++ GL R   L EA D  NE++E+G+ PD
Sbjct: 495 YFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPD 554

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +IH +CK+G++  A    + M + S KPD+VT NTL++G C  G+++KA KL+ 
Sbjct: 555 DTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFE 614

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             + +    + I+Y  LI   C  G V  A   + +M  +G++P   + N ++     +G
Sbjct: 615 SWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 674

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   L K+   G    S S   L    V E    K      +            Y 
Sbjct: 675 RTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYT 734

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            ++ G C  G+  +++ IL  M++KG++ D STY TL+ G V + 
Sbjct: 735 KLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQ 779



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 241/464 (51%), Gaps = 4/464 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRC-- 81
           G  P T   +  ++AY R      A QL++S+  +  ++P +   N++++ L +      
Sbjct: 126 GNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSP 185

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
             + +    ++ + L P+  T+N L+   C K  +++A      M   G++PD V+++TL
Sbjct: 186 QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTL 245

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           +    R G L  A      MK  G+ P    Y  +++ Y R G++ +A K+ + M   G 
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-VFPDFYTFTTLIHGHCKDGNMNKAL 260
             D+ TYN +  GLC+A  + EA  L +EM   G + PD  T+ TL     K    + AL
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L + M +K +K  +VT+N +I G CK GE+E A      M    ++P+ I+Y  LI+ +
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G++ +A+ L  EMV +G+K    + NT++   C+     +A   L      G  PD 
Sbjct: 426 CKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDE 485

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           +SY T++  + +E N + A  L  +M  + L P + TYN ++ G  R GR+ ++   L  
Sbjct: 486 VSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNE 545

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++EKGL PD +TY  +I+ +  + +L+ AF+FH++M++  F PD
Sbjct: 546 LMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPD 589



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 211/432 (48%), Gaps = 41/432 (9%)

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQL- 151
           +G  P T   +  L    R      A ++   + RR  V P + + + ++   +R+    
Sbjct: 125 LGNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTS 184

Query: 152 -DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
              +L  FR + +  L P++  + ++++ +C  G + +AL     M   G   D VTYNT
Sbjct: 185 PQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNT 244

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +LN  CR  ML EA  L   M + GV P   T+ TL+  + + G + +A  + + MT   
Sbjct: 245 LLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG 304

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR--KISPNYISYGILINGYCSMGHVTE 328
            +PD+ TYN L  G C+ G++++A +L  D + R   + P+ ++Y  L +        ++
Sbjct: 305 FEPDLWTYNVLAAGLCQAGKVDEAFRL-KDEMERLGTLLPDVVTYNTLADACFKCRCSSD 363

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A RL  EM  KG+K TLV+ N +IKG C+ G+   A   L+KM  +G+ PD I+YNTLI+
Sbjct: 364 ALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIH 423

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE------------- 435
              +  N+ KA+ L+ +M  +GL  D  T N +L   C++ R  +++             
Sbjct: 424 AHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMP 483

Query: 436 ---------------------LILW-RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
                                L LW  MIEK L P  STY TLI G      LKEA    
Sbjct: 484 DEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKL 543

Query: 474 DEMLQRGFVPDD 485
           +E++++G VPDD
Sbjct: 544 NELMEKGLVPDD 555


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  315 bits (806), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 169/492 (34%), Positives = 281/492 (57%), Gaps = 13/492 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK  ++   +  L +M+  G++P+  TYN L++ YC+  +L+EA +++  M+GKG
Sbjct: 252 VLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKG 311

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TYN+++ GLC +G+ D A  + D+M    L PD  TYNTL ++ C +   S+A 
Sbjct: 312 MLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTL-IDGCFEHRGSDAA 370

Query: 121 -EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  EM  RGV  + V+ + +I  F   G++D A     +M  +G  PD   Y  +ING
Sbjct: 371 FKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMING 430

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G + EA KM DEM  KG  +D  T NT+L+ +C  K L +A  L  +  +RG   D
Sbjct: 431 YCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILD 490

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G+ KD   ++AL L++ M +  I   I+TYNT+I G C  G+ ++A     
Sbjct: 491 EVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLN 550

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +++ + + P+  +  I+I+GYC  G V +AF+   +MV   +KP + +CN +++G CR G
Sbjct: 551 ELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREG 610

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              K     +  +S+G   D+++YN +I+ F +E  ++ AF L+++ME + L PD  TYN
Sbjct: 611 MLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYN 670

Query: 420 VILTGFCRQGRMHDSELILWRMIEKG-------LNPDRST----YTTLINGHVSQNNLKE 468
            I+TG  + GR  ++E +  +  EKG        +P+  T    Y+  I+   +Q   K+
Sbjct: 671 AIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKD 730

Query: 469 AFRFHDEMLQRG 480
           A +   +  Q+G
Sbjct: 731 AMKLFQQAEQKG 742



 Score =  277 bits (708), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 263/487 (54%), Gaps = 3/487 (0%)

Query: 1   MVNALCKD---HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++NAL +    H +  ++    +  + GV P+  T+N LI+ YC +   EEA +L+N M 
Sbjct: 179 LLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMG 238

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             G  P   TYN+++  LCK+ +  + +++L +M   GL P+  TYN L+   C+ + + 
Sbjct: 239 EYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLK 298

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA E+   M+ +G+ PD+ +++T++      G++D A+    +M+S  LVPD V Y  +I
Sbjct: 299 EAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLI 358

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G   +     A K+ +EM  +G   + VT+N ++   C    + EA ++  +M+E G  
Sbjct: 359 DGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFS 418

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD +T+ T+I+G+CK G M +A  + D M +K +K D  T NTL+   C   +++ A  L
Sbjct: 419 PDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTL 478

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
                 R    + ++YG LI GY        A +LW EM   GI  T+++ NTII+G C 
Sbjct: 479 TMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCL 538

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           SG   +A + L++++ +G+ PD  + N +I+G+  E  ++KAF   +KM    L PD+ T
Sbjct: 539 SGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFT 598

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            N++L G CR+G +     +    I KG   D  TY  +I+    +  L++AF    EM 
Sbjct: 599 CNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEME 658

Query: 478 QRGFVPD 484
            +   PD
Sbjct: 659 GKNLEPD 665



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 251/487 (51%), Gaps = 6/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N +  DH   S    L   +     P     +T + AY          Q+ N M    
Sbjct: 112 LLNFISSDHPHHSLHAHLLRSDHTIPKP---LLDTSLAAYVISKQPHLGHQIFNKMKRLR 168

Query: 61  LKPGVFTYNSLINGLCKKGRCDR---AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            +P + T N+L+N L +         ++EV  + +++G+ P+  T+N L+   C   N  
Sbjct: 169 FRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTE 228

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA  +  +M   G  PD V+++T++    +  QL +      +MK++GL P+   Y I++
Sbjct: 229 EALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILV 288

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +GYC+  ++ EA ++ + M  KG + DV TYNT++ GLC    + EA  L ++M    + 
Sbjct: 289 HGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLV 348

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+ TLI G  +    + A  L + M  + +K + VT+N +I  FC  G++++A+ +
Sbjct: 349 PDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNV 408

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M+    SP+  +Y  +INGYC  G + EA+++  EM  KG+K    + NT++   C 
Sbjct: 409 MVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCL 468

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
                 A     K    G   D ++Y TLI G+ ++E  D+A  L  +M+  G+V  +IT
Sbjct: 469 EKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIIT 528

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN I+ G C  G+   +   L  ++EKGL PD ST   +I+G+  +  +++AF+FH++M+
Sbjct: 529 YNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMV 588

Query: 478 QRGFVPD 484
           +    PD
Sbjct: 589 EHSLKPD 595



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 195/388 (50%), Gaps = 11/388 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C + KID A   + +M + G  PD  TYNT+IN YC+ G + EA+++M+ M  KG
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK   FT N+L++ +C + + D A  +  +  + G   D  TY TL++   + E    A 
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRAL 511

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM   G+   I++++T+I     +G+ D+A+    E+   GLVPD     III+GY
Sbjct: 512 KLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGY 571

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A +  ++M+E     D+ T N +L GLCR  ML +   LFN  + +G   D 
Sbjct: 572 CWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDT 631

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW-- 298
            T+  +I   CK+  +  A +L   M  K+++PD  TYN ++ G  K G  E+A KL   
Sbjct: 632 VTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALK 691

Query: 299 -----ADMISRKISPNY----ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
                  + ++  SP      + Y   I+  C+ G   +A +L+ +   KG+     +  
Sbjct: 692 FAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYI 751

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVD 377
            ++ G  +   +      L  MVS  + 
Sbjct: 752 KLMDGLLKRRKSFTTTSLLPFMVSATIQ 779


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  314 bits (805), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 159/483 (32%), Positives = 272/483 (56%), Gaps = 10/483 (2%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D A+    EM  + + PD V +N L++  C++G + E+ +L+  +  +G+ P +FT+N  
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257

Query: 72  INGLCKKGRCDRA---------KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           + GLC++G  DRA         +E L +M+  G  PD  TYN+++   C+K  + +A  +
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             +   +G  PD  ++ +LI  F ++G  DRA+  F++    GL P  VLY  +I G  +
Sbjct: 318 LKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQ 377

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G +L AL++ +EM E GC+ ++ TYN ++NGLC+   +++A  L ++ + +G  PD +T
Sbjct: 378 QGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFT 437

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           + TLI G+CK   ++ A  + + M  + + PD++TYNTL++G CK G+ E+  +++  M 
Sbjct: 438 YNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
            +  +PN I+Y I+++  C    V EA  L  EM  KG+KP +VS  T+  G+C+ GD  
Sbjct: 498 EKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDID 557

Query: 363 KADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            A +   +M  +  V   + +YN +++ F  + NM+ A  L S M+N G  PD  TY V+
Sbjct: 558 GAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVV 617

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + GFC+ G +      L   +EK   P  +T+  ++N    ++ + EA      MLQ+G 
Sbjct: 618 IDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGI 677

Query: 482 VPD 484
           VP+
Sbjct: 678 VPE 680



 Score =  277 bits (709), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 156/508 (30%), Positives = 259/508 (50%), Gaps = 45/508 (8%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  +GV  D  TY   I ++C+      A +L+ +M   G       Y +++ GL   G 
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A+E+ DEML   L PD   +N L+   C+K  + E+E +  ++ +RGV P++ +F+ 
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256

Query: 141 LIGIFSRNGQLDRALM---------YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            +    R G LDRA+          Y R+M + G  PD++ Y  II+GYC+ G V +A +
Sbjct: 257 FVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANR 316

Query: 192 -MRDEM----------------------------------LEKGCVMDVVTYNTILNGLC 216
            ++D +                                  L KG    +V YNT++ GL 
Sbjct: 317 VLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLS 376

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
           +  ++  A  L NEM E G  P+ +T+  +I+G CK G ++ A +L D    K   PDI 
Sbjct: 377 QQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIF 436

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TYNTLIDG+CK  +++ A ++   M S+ ++P+ I+Y  L+NG C  G   E   ++  M
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM 496

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
             KG  P +++ N I+   C++   ++A + L +M S+G+ PD +S+ TL  GF +  ++
Sbjct: 497 EEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDI 556

Query: 397 DKAFALVSKMENQ-GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           D A+ L  +ME Q  +     TYN+I++ F  Q  M+ +  +   M   G +PD  TY  
Sbjct: 557 DGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRV 616

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +I+G     N+ + ++F  E +++ F+P
Sbjct: 617 VIDGFCKMGNITQGYKFLLENMEKRFIP 644



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 242/458 (52%), Gaps = 9/458 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   ++N ++N     G+  +A ++   M  +G++  V+TY   I   CK  R   A  +
Sbjct: 109 PSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRL 168

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L  M ++G   +   Y T++           A E+F EM  R + PD+V+F+ L+ +  +
Sbjct: 169 LRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCK 228

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF---------VLEALKMRDEMLE 198
            G +  +     ++   G+ P+   + I + G CR G          V+EA +   +M+ 
Sbjct: 229 KGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN 288

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G   D +TYN+I++G C+  M+ +A+ +  + + +G  PD +T+ +LI+G CKDG+ ++
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDR 348

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+ +F     K ++P IV YNTLI G  + G +  A +L  +M      PN  +Y ++IN
Sbjct: 349 AMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVIN 408

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G C MG V++A  L  + + KG  P + + NT+I GYC+      A E +++M S+G+ P
Sbjct: 409 GLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTP 468

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D I+YNTL+NG  +    ++   +   ME +G  P++ITYN+I+   C+  +++++  +L
Sbjct: 469 DVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLL 528

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
             M  KGL PD  ++ TL  G     ++  A++    M
Sbjct: 529 GEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 231/462 (50%), Gaps = 9/462 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            Y   +  Y R+G ++EA      M      P V ++N+++N L + G  ++A +V   M
Sbjct: 78  AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRM 137

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              G+  D  TY   +   C+      A  +   M   G   + V++ T++     +G+ 
Sbjct: 138 RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEH 197

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D A   F EM +  L PD V +  +++  C+ G V E+ ++  ++L++G   ++ T+N  
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257

Query: 212 LNGLCRAKML---------TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           + GLCR   L          EA++   +M+  G  PD  T+ ++I G+CK G +  A  +
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
                 K  KPD  TY +LI+GFCK G+ ++A  ++ D + + + P+ + Y  LI G   
Sbjct: 318 LKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQ 377

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G +  A +L  EM   G  P + + N +I G C+ G  S A   +   +++G  PD  +
Sbjct: 378 QGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFT 437

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNTLI+G+ ++  +D A  +V++M +QG+ PDVITYN +L G C+ G+  +   I   M 
Sbjct: 438 YNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           EKG  P+  TY  +++       + EA     EM  +G  PD
Sbjct: 498 EKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 228/425 (53%), Gaps = 10/425 (2%)

Query: 2   VNALCKDHKID---------SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL 52
           V  LC++  +D          A+ +L +M   G  PD +TYN++I+ YC++G +++A ++
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317

Query: 53  MNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCR 112
           +     KG KP  FTY SLING CK G  DRA  V  + L  GL P    YNTL+    +
Sbjct: 318 LKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQ 377

Query: 113 KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           +  +  A ++  EM+  G  P+I +++ +I    + G +  A     +  + G  PD   
Sbjct: 378 QGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFT 437

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           Y  +I+GYC+   +  A +M + M  +G   DV+TYNT+LNGLC+A    E  ++F  M 
Sbjct: 438 YNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
           E+G  P+  T+  ++   CK   +N+A++L   M  K +KPD+V++ TL  GFCK+G+++
Sbjct: 498 EKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDID 557

Query: 293 KANKLWADMISR-KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
            A +L+  M  +  +     +Y I+++ +    ++  A +L+  M   G  P   +   +
Sbjct: 558 GAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVV 617

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I G+C+ G+ ++  +FL + + +   P   ++  ++N    ++ + +A  ++  M  +G+
Sbjct: 618 IDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGI 677

Query: 412 VPDVI 416
           VP+ +
Sbjct: 678 VPETV 682



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 209/383 (54%), Gaps = 1/383 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +  A   L +   KG  PD  TY +LIN +C++G  + A  +     GKG
Sbjct: 301 IIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKG 360

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P +  YN+LI GL ++G    A ++++EM + G  P+  TYN ++   C+   +S+A 
Sbjct: 361 LRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDAS 420

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +   +G  PDI +++TLI  + +  +LD A      M S G+ PD + Y  ++NG 
Sbjct: 421 HLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGL 480

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   E +++   M EKGC  +++TYN I++ LC+AK + EA DL  EM  +G+ PD 
Sbjct: 481 CKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDV 540

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +F TL  G CK G+++ A  LF  M  Q  +     TYN ++  F +   M  A KL++
Sbjct: 541 VSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFS 600

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M +    P+  +Y ++I+G+C MG++T+ ++   E + K   P+L +   ++   C   
Sbjct: 601 VMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKD 660

Query: 360 DASKADEFLSKMVSEGVDPDSIS 382
              +A   +  M+ +G+ P++++
Sbjct: 661 KVHEAVGIIHLMLQKGIVPETVN 683


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  314 bits (804), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 172/519 (33%), Positives = 275/519 (52%), Gaps = 35/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A CK  + D+AK  L EM ++G   +TVTYN LI   CR G +EEAF     M   G
Sbjct: 250 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 309

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  FTY +LINGLCK  R + AK +LDEM    L P+   Y  L+    R+ N  EA 
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 369

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   GV P+ +++  L+    + GQ+DRA +  ++M      PD + Y +II G+
Sbjct: 370 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 429

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R+    +A ++  EM   G   +V TY+ +++GLC++    +A DL  EM  +G+ P+ 
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +  LI G+C++GN++ A  +FD MT+ ++ PD+  YN+LI G  KVG +E++ K +A 
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + PN  +Y  LI+GY   G +  A +L   M+  G+KP  V    +++ Y +S D
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 609

Query: 361 ASKADEFLSKMVSEGV-----------------------------------DPDSISYNT 385
             K       M+ +GV                                    PD   Y++
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  +  + +KAF ++ +M  +G+ P+++ YN ++ G C+ G +  +  +   ++ KG
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L P+  TYT+LI+G     ++  AF  ++EML  G  PD
Sbjct: 730 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 768



 Score =  294 bits (753), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 153/487 (31%), Positives = 272/487 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  + + AK  L EM    + P+ V Y  LI+ + REG  +EAF+++  M   G
Sbjct: 320 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 379

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TY++L+ GLCK G+ DRA  +L +M++    PDT TYN ++    R  +  +A 
Sbjct: 380 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 439

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM   G++P++ ++S +I    ++G+ ++A     EM + GL P+  +Y  +I+GY
Sbjct: 440 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 499

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V  A ++ D+M +   + D+  YN+++ GL +   + E+   F +M ERG+ P+ 
Sbjct: 500 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 559

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LIHG+ K+G++  A  L   M    +KP+ V Y  L++ + K  ++EK +  +  
Sbjct: 560 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 619

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + +  +   YGILI+   S G++  AFR+   +   G  P +   +++I G C++ D
Sbjct: 620 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 679

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L +M  +GVDP+ + YN LI+G  +  ++  A  + + +  +GLVP+ +TY  
Sbjct: 680 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 739

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G + ++  +   M+  G+ PD   Y+ L  G  S  +L++A    +EM  RG
Sbjct: 740 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799

Query: 481 FVPDDAF 487
                +F
Sbjct: 800 HASISSF 806



 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 266/479 (55%), Gaps = 1/479 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCK  ++D A + L +M +    PDT+TYN +I  + R    ++AF+L++ M   G
Sbjct: 390 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 449

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TY+ +I+GLC+ G  ++A ++L+EM   GL P+   Y  L+   CR+ N+S A 
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 509

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF +M++  V PD+  +++LI   S+ G+++ +  YF +M+  GL+P+   Y+ +I+GY
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG +  A ++   ML+ G   + V Y  +L    ++  + +    F  ML++GV  D 
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 629

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LIH     GNM  A  +   + +    PD+  Y++LI G CK  + EKA  +  +
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 689

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + PN + Y  LI+G C  G ++ A  ++  ++ KG+ P  V+  ++I G C+ GD
Sbjct: 690 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 749

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A    ++M++ G+ PD+  Y+ L  G     ++++A  L+ +M  +G    + ++N 
Sbjct: 750 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNN 808

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++ GFC++G+M ++  +L  ++ +GL P+  T   +I+G      L E      E+ Q+
Sbjct: 809 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 242/452 (53%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           + L++ Y + G +++A +++  M  +G+ P +   N+L+  L +        +V + M+ 
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVG 237

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            G+SPD  TY+TL+   C+      A+++  EM  RG   + V+++ LI    R+G ++ 
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A  + ++M+  GLVPD   Y  +ING C++    EA  + DEM       +VV Y  +++
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           G  R     EA  +  EM+  GV P+  T+  L+ G CK G M++A  L   M + S +P
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D +TYN +I+G  +    + A +L ++M +  ISPN  +Y I+I+G C  G   +A  L 
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EM  KG+KP       +I GYCR G+ S A E   KM    V PD   YN+LI G  + 
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             ++++    ++M+ +GL+P+  TY+ ++ G+ + G +  +E ++ RM++ GL P+   Y
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 597

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             L+  +   +++++       ML +G + D+
Sbjct: 598 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 629



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 244/484 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+   K  ++  A   +  M  +G+ P     N L+    R   +   +++   M G G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TY++LI   CK    D AK+VL EM + G   +T TYN L+   CR   + EA 
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +M   G+ PD  ++  LI    ++ + + A     EM  A L P+ V+Y  +I+G+
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   EA KM  EM+  G   + +TY+ ++ GLC+   +  A  L  +M+     PD 
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I GH +  +   A  L   M    I P++ TY+ +I G C+ GE EKA+ L  +
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M ++ + PN   Y  LI+GYC  G+V+ A  ++ +M    + P L   N++I G  + G 
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 539

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             ++ ++ ++M   G+ P+  +Y+ LI+G+++  +++ A  LV +M + GL P+ + Y  
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L  + +   +         M+++G+  D   Y  LI+   S  N++ AFR    + + G
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 659

Query: 481 FVPD 484
            VPD
Sbjct: 660 SVPD 663



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 241/530 (45%), Gaps = 89/530 (16%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG---------------- 44
           M++ LC+  + + A   L EM  KG+ P+   Y  LI+ YCREG                
Sbjct: 460 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 519

Query: 45  -------------------FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                               +EE+ +    M  +GL P  FTY+ LI+G  K G  + A+
Sbjct: 520 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE 579

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +++  ML  GL P+   Y  LL    + +++ +    F  M  +GV  D   +  LI   
Sbjct: 580 QLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 639

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S +G ++ A      ++  G VPD  +Y+ +I+G C+     +A  + DEM +KG   ++
Sbjct: 640 SSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNI 699

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V YN +++GLC++  ++ A ++FN +L +G+ P+  T+T+LI G CK G+++ A  L++ 
Sbjct: 700 VCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNE 759

Query: 266 MTQKSIKPD----------------------------------IVTYNTLIDGFCKVGEM 291
           M    I PD                                  I ++N L+DGFCK G+M
Sbjct: 760 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKM 819

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE---------------- 335
           ++  KL   ++ R + PN ++   +I+G    G ++E   ++ E                
Sbjct: 820 QETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL 879

Query: 336 ---MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
              M+ +G  P  V  + +I+ +C+ G+  KA      +V++       SY  +++   R
Sbjct: 880 FMDMINQGKIPLDV-VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 938

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           +  + +A  L+ +M+ +G+ P      ++LT     G + +   +L  M+
Sbjct: 939 KGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNML 988


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  313 bits (803), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 153/389 (39%), Positives = 244/389 (62%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN LCK+ K+  A+ F+  ME  G  P+ V+YNT+I+ Y   G +E A +++++M  KG
Sbjct: 233 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 292

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  +TY SLI+G+CK+GR + A  + D+M+++GL P+  TYNTL+   C K ++  A 
Sbjct: 293 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 352

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM ++G+ P + +++ L+      G++  A    +EM+  G++PD + Y I+INGY
Sbjct: 353 SYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 412

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A  + +EML KG     VTY +++  L R   + EADDLF ++L++GV PD 
Sbjct: 413 SRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 472

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  ++ GHC +GN+ +A  L   M +KS+ PD VT+NTL+ G C+ G++E+A  L  +
Sbjct: 473 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 532

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P++ISY  LI+GY   G + +AFR+  EM+  G  PTL++ N +IK  C++ +
Sbjct: 533 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 592

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLING 389
              A+E L +MV++G+ PD  +Y +LI G
Sbjct: 593 GDLAEELLKEMVNKGISPDDSTYLSLIEG 621



 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/468 (33%), Positives = 264/468 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+  + D A      M++KG+ P   T N +++ + +   +E A+ L   M    
Sbjct: 163 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLR 222

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V+T+N ++N LCK+G+  +A+E +  M  +G  P+  +YNT++     + N+  A 
Sbjct: 223 ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGAR 282

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M  +G+ PD  ++ +LI    + G+L+ A   F +M   GLVP+ V Y  +I+GY
Sbjct: 283 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 342

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A   RDEM++KG +  V TYN +++ L     + EADD+  EM ++G+ PD 
Sbjct: 343 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 402

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G+ + GN  KA +L + M  K I+P  VTY +LI    +   M++A+ L+  
Sbjct: 403 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 462

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + +SP+ I +  +++G+C+ G+V  AF L  EM  K + P  V+ NT+++G CR G 
Sbjct: 463 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 522

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L +M   G+ PD ISYNTLI+G+ R  ++  AF +  +M + G  P ++TYN 
Sbjct: 523 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 582

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           ++   C+      +E +L  M+ KG++PD STY +LI G  + + L E
Sbjct: 583 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 138/418 (33%), Positives = 238/418 (56%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
             ++ L+   C+  R D A +    M + G+ P   T N +L    +   M  A  ++ E
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M R  ++  + +F+ ++ +  + G+L +A  +   M+  G  P+ V Y  II+GY   G 
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           +  A ++ D M  KG   D  TY ++++G+C+   L EA  LF++M+E G+ P+  T+ T
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI G+C  G++ +A +  D M +K I P + TYN L+      G M +A+ +  +M  + 
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I P+ I+Y ILINGY   G+  +AF L  EM+ KGI+PT V+  ++I    R     +AD
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 457

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +   K++ +GV PD I +N +++G     N+++AF L+ +M+ + + PD +T+N ++ G 
Sbjct: 458 DLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGR 517

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           CR+G++ ++ ++L  M  +G+ PD  +Y TLI+G+  + ++K+AFR  DEML  GF P
Sbjct: 518 CREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 575



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 169/318 (53%)

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
           V  ++++ +++   C      EA K    M EKG V  + T N +L+   +   +  A  
Sbjct: 154 VKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWV 213

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L+ EM    +    YTF  +++  CK+G + KA      M     KP++V+YNT+I G+ 
Sbjct: 214 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 273

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
             G +E A ++   M  + I P+  +YG LI+G C  G + EA  L+ +MV  G+ P  V
Sbjct: 274 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 333

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + NT+I GYC  GD  +A  +  +MV +G+ P   +YN L++    E  M +A  ++ +M
Sbjct: 334 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
             +G++PD ITYN+++ G+ R G    +  +   M+ KG+ P   TYT+LI     +N +
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453

Query: 467 KEAFRFHDEMLQRGFVPD 484
           KEA    +++L +G  PD
Sbjct: 454 KEADDLFEKILDQGVSPD 471



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 167/330 (50%), Gaps = 35/330 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ +CK+ +++ A     +M + G+ P+ VTYNTLI+ YC +G LE AF   + M  KG
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362

Query: 61  LKPGVFTYNSLINGLCKKGR--------------------------------CDRAKEVL 88
           + P V TYN L++ L  +GR                                C  AK+  
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422

Query: 89  D---EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           D   EML  G+ P   TY +L+    R+  M EA+++F ++  +GV+PD++ F+ ++   
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 482

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
             NG ++RA M  +EM    + PD V +  ++ G CR G V EA  + DEM  +G   D 
Sbjct: 483 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 542

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           ++YNT+++G  R   + +A  + +EML  G  P   T+  LI   CK+   + A  L   
Sbjct: 543 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 602

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           M  K I PD  TY +LI+G   V  + + N
Sbjct: 603 MVNKGISPDDSTYLSLIEGMGNVDTLVEDN 632


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 156/479 (32%), Positives = 281/479 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+  K+  A   L +M+ +   PD V+Y+T+I+ YC  G L++A +LM+ M  KG
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TYNS+I  LCK G+   A++VL EM+   + PD   Y TL+    +  ++  A 
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F EM  + ++PD ++++TLI  F + G++      F EM S GL PD V YT +I+ Y
Sbjct: 384 KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++ A  + +EM++ G   ++VTY  +++GLC+   L  A++L +EM ++G+  + 
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNV 503

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + ++++G CK GN+ +A+ L   M    I PD +TY T+ID +C++G+++KA+KL  +
Sbjct: 504 CIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R + P  +++ +L+NG+C +G + +  RL   M+ KGI P  ++ NT++K +C    
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +   +   +M ++GV PDS +YN LI G  +  N+ +A+ L  +M  +G VP V +YN 
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++  F ++ +  ++  +   M   GL  D   Y   ++    + +++      DE +++
Sbjct: 684 LIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 159/474 (33%), Positives = 268/474 (56%), Gaps = 3/474 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           I+ A    CE    G+  +T +YN +I + CR G ++EA +L+  M  +   P V +Y++
Sbjct: 242 IEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +I+G C  G   +A +++D+M   GL P+  TYN++++  C+     EAE++  EM  + 
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + PD V ++TLI  F + G +  A  +F EM S  + PD + YT +I G+ + G V+E  
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM+ +G   D VTY T+++  C+A  +  A  L NEM++ G+ P+  T+  LI G 
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK G ++ A  L D M +K ++ ++  YN++++G CK G +E+A KL  +M    I P+ 
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           I+Y  +I+ YC +G + +A +L  EM+ +G++PT+V+ N ++ G+C  G     D  L  
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ +G+ PD+I+YNTL+       +M+    +  +M NQG+ PD  TYN+++ G C+   
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + ++  +   MIEKG  P  ++Y  LI     +    EA    +EM   G V D
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVAD 712



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 151/344 (43%), Gaps = 58/344 (16%)

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF--------------- 237
           R+  LE  C+  ++    + N L  A  L   D   N  LE GV                
Sbjct: 130 REPSLEARCI--IIHIAVVSNDLRLAHELVH-DYFLNSKLEIGVKMTQFTHRLIYTYKYW 186

Query: 238 -PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE-MEKAN 295
            P+   F        + G++++A  L D +    +   + + N  +       E +E A 
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           K++ +     IS N  SY I+I   C +G V EA RL  +M  +   P +VS +T+I GY
Sbjct: 247 KVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303

Query: 356 CRSGDASK-----------------------------------ADEFLSKMVSEGVDPDS 380
           C  G+  K                                   A++ L +M+S+ + PD+
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           + Y TLI+GF +  ++  A     +M ++ + PD ITY  ++ GF + G++ + + +   
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           MI +GL PD  TYTTLI+ +     +  AF  H+EM+Q G  P+
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPN 467


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 165/485 (34%), Positives = 273/485 (56%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   CK  K+ SA  F  +M + G  P+ VTY  LI   C+ G + +A+ L   M  K 
Sbjct: 355 LVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKN 414

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF  NSLI G  K    + A ++ DE +   ++ +  TYN+LL   C++  MSEA 
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEAT 473

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +M  +G+AP  VS++++I    R G LD A   F +M   GL P+ + Y+I+++GY
Sbjct: 474 TLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGY 533

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG    A  + D M+++  V    TYN  +NGLC+    +EA D+  + +E+G  P  
Sbjct: 534 FKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVC 593

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++ G  K+G+++ AL  +  M +  + P+++TY TLI+GFCK    + A K+  +
Sbjct: 594 LTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNE 653

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M ++ +  +  +YG LI+G+C    +  A  L+ E++  G+ P  V  N++I GY    +
Sbjct: 654 MRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNN 713

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M+ EG+  D  +Y TLI+G ++E  +  A  L S+M  +G++PD+I Y V
Sbjct: 714 MEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTV 773

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C +G++ +++ IL  M    + P+   Y  LI GH    NL+EAFR H+EML +G
Sbjct: 774 LINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKG 833

Query: 481 FVPDD 485
             P+D
Sbjct: 834 LTPND 838



 Score =  272 bits (695), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 151/477 (31%), Positives = 260/477 (54%), Gaps = 8/477 (1%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           DH I S K F  +        D   YN L+N+Y +   L +A    N +    + P +  
Sbjct: 159 DHFIGSTKRFDFD-------SDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKF 211

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            N L+  L K      A+EV ++M+  G+  D  T + ++  + +  N  EA++ F E  
Sbjct: 212 LNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAK 271

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
            RGV  D  ++S +I  F +N  ++ A    ++M+  G VP    +T +I    + G ++
Sbjct: 272 SRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMV 331

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EAL+++DEM+  G  M+VV   T++ G C+   L  A + F++M E G  P+  T+  LI
Sbjct: 332 EALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLI 391

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
              CK+GNM KA +L+  M  K+I P +   N+LI GF KV   E+A+KL+ + ++  I+
Sbjct: 392 EWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA 451

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            N  +Y  L++  C  G ++EA  LW +M+ KG+ PT VS N++I G+CR G+   A   
Sbjct: 452 -NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASV 510

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
            S M+  G+ P+ I+Y+ L++G+ +  + + AF +  +M ++ +VP   TYN+ + G C+
Sbjct: 511 FSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCK 570

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GR  +++ +L + +EKG  P   TY ++++G + + ++  A   + EM + G  P+
Sbjct: 571 VGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPN 627



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 203/362 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C+   +D A     +M   G+ P+ +TY+ L++ Y + G  E AF + + M  + 
Sbjct: 494 MILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDEN 553

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTYN  INGLCK GR   A+++L + ++ G  P   TYN+++    ++ ++S A 
Sbjct: 554 IVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSAL 613

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + EM   GV+P++++++TLI  F +N   D AL    EM++ GL  D   Y  +I+G+
Sbjct: 614 TAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGF 673

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A  +  E+L+ G   + V YN++++G      +  A +L   ML  G+  D 
Sbjct: 674 CKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDL 733

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI G  K+G +  AL+L+  M+ K I PDI+ Y  LI+G C  G++E A K+ A+
Sbjct: 734 QTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAE 793

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I+PN   Y  LI G+   G++ EAFRL  EM+ KG+ P   + + +I G  + G+
Sbjct: 794 MERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853

Query: 361 AS 362
           ++
Sbjct: 854 SA 855



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 5/134 (3%)

Query: 358 SGDASK-----ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
           SGD+        D F+        D D   YN L+N +++   ++ A    +++    +V
Sbjct: 147 SGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIV 206

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P +   N +LT   +   ++++  +  +M+ KG++ D  T   ++  ++  NN +EA +F
Sbjct: 207 PWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKF 266

Query: 473 HDEMLQRGFVPDDA 486
             E   RG   D A
Sbjct: 267 FLEAKSRGVKLDAA 280


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 156/479 (32%), Positives = 282/479 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+  K+  A   L +M+ +   PD V+Y+T+I+ YC  G L++A +LM+ M  KG
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TYNS+I  LCK G+   A++VL EM+   + PD   Y TL+    +  ++  A 
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F EM  + ++PD ++++TLI  F + G++      F EM S GL PD V YT +I+ Y
Sbjct: 384 KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++ A  + +EM++ G   ++VTY  +++GLC+   L  A++L +EM ++G+  + 
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNV 503

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + ++++G CK GN+ +A+ L   M    I PD +TY T+ID +C++G+++KA+KL  +
Sbjct: 504 CIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R + P  +++ +L+NG+C +G + +  RL   M+ KGI P  ++ NT++K +C    
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +   +   +M ++GV PDS +YN LI G  +  N+ +A+ L  +M  +G VP V +YN 
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++  F ++ ++ ++  +   M   GL  D   Y   ++    + +++      DE +++
Sbjct: 684 LIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  308 bits (788), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 159/474 (33%), Positives = 269/474 (56%), Gaps = 3/474 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           I+ A    CE    G+  +T +YN +I + CR G ++EA +L+  M  +   P V +Y++
Sbjct: 242 IEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +I+G C  G   +A +++D+M   GL P+  TYN++++  C+     EAE++  EM  + 
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + PD V ++TLI  F + G +  A  +F EM S  + PD + YT +I G+ + G V+E  
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM+ +G   D VTY T+++  C+A  +  A  L NEM++ G+ P+  T+  LI G 
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK G ++ A  L D M +K ++ ++  YN++++G CK G +E+A KL  +M    I P+ 
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           I+Y  +I+ YC +G + +A +L  EM+ +G++PT+V+ N ++ G+C  G     D  L  
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ +G+ PD+I+YNTL+       +M+    +  +M NQG+ PD  TYN+++ G C+   
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + ++  +   MIEKG  P  ++Y  LI     +  + EA    +EM   G V D
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVAD 712



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 151/344 (43%), Gaps = 58/344 (16%)

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF--------------- 237
           R+  LE  C+  ++    + N L  A  L   D   N  LE GV                
Sbjct: 130 REPSLEARCI--IIHIAVVSNDLRLAHELVH-DYFLNSKLEIGVKMTQFTHRLIYTYKYW 186

Query: 238 -PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE-MEKAN 295
            P+   F        + G++++A  L D +    +   + + N  +       E +E A 
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           K++ +     IS N  SY I+I   C +G V EA RL  +M  +   P +VS +T+I GY
Sbjct: 247 KVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303

Query: 356 CRSGDASK-----------------------------------ADEFLSKMVSEGVDPDS 380
           C  G+  K                                   A++ L +M+S+ + PD+
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           + Y TLI+GF +  ++  A     +M ++ + PD ITY  ++ GF + G++ + + +   
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           MI +GL PD  TYTTLI+ +     +  AF  H+EM+Q G  P+
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPN 467


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  313 bits (802), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/389 (39%), Positives = 244/389 (62%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN LCK+ K+  A+ F+  ME  G  P+ V+YNT+I+ Y   G +E A +++++M  KG
Sbjct: 255 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 314

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  +TY SLI+G+CK+GR + A  + D+M+++GL P+  TYNTL+   C K ++  A 
Sbjct: 315 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 374

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM ++G+ P + +++ L+      G++  A    +EM+  G++PD + Y I+INGY
Sbjct: 375 SYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 434

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A  + +EML KG     VTY +++  L R   + EADDLF ++L++GV PD 
Sbjct: 435 SRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 494

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  ++ GHC +GN+ +A  L   M +KS+ PD VT+NTL+ G C+ G++E+A  L  +
Sbjct: 495 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 554

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P++ISY  LI+GY   G + +AFR+  EM+  G  PTL++ N +IK  C++ +
Sbjct: 555 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 614

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLING 389
              A+E L +MV++G+ PD  +Y +LI G
Sbjct: 615 GDLAEELLKEMVNKGISPDDSTYLSLIEG 643



 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/468 (33%), Positives = 264/468 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+  + D A      M++KG+ P   T N +++ + +   +E A+ L   M    
Sbjct: 185 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLR 244

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V+T+N ++N LCK+G+  +A+E +  M  +G  P+  +YNT++     + N+  A 
Sbjct: 245 ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGAR 304

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M  +G+ PD  ++ +LI    + G+L+ A   F +M   GLVP+ V Y  +I+GY
Sbjct: 305 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 364

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A   RDEM++KG +  V TYN +++ L     + EADD+  EM ++G+ PD 
Sbjct: 365 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 424

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G+ + GN  KA +L + M  K I+P  VTY +LI    +   M++A+ L+  
Sbjct: 425 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 484

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + +SP+ I +  +++G+C+ G+V  AF L  EM  K + P  V+ NT+++G CR G 
Sbjct: 485 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 544

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L +M   G+ PD ISYNTLI+G+ R  ++  AF +  +M + G  P ++TYN 
Sbjct: 545 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 604

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           ++   C+      +E +L  M+ KG++PD STY +LI G  + + L E
Sbjct: 605 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652



 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 138/418 (33%), Positives = 238/418 (56%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
             ++ L+   C+  R D A +    M + G+ P   T N +L    +   M  A  ++ E
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M R  ++  + +F+ ++ +  + G+L +A  +   M+  G  P+ V Y  II+GY   G 
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           +  A ++ D M  KG   D  TY ++++G+C+   L EA  LF++M+E G+ P+  T+ T
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI G+C  G++ +A +  D M +K I P + TYN L+      G M +A+ +  +M  + 
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I P+ I+Y ILINGY   G+  +AF L  EM+ KGI+PT V+  ++I    R     +AD
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 479

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +   K++ +GV PD I +N +++G     N+++AF L+ +M+ + + PD +T+N ++ G 
Sbjct: 480 DLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGR 539

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           CR+G++ ++ ++L  M  +G+ PD  +Y TLI+G+  + ++K+AFR  DEML  GF P
Sbjct: 540 CREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 597



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 169/318 (53%)

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
           V  ++++ +++   C      EA K    M EKG V  + T N +L+   +   +  A  
Sbjct: 176 VKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWV 235

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L+ EM    +    YTF  +++  CK+G + KA      M     KP++V+YNT+I G+ 
Sbjct: 236 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 295

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
             G +E A ++   M  + I P+  +YG LI+G C  G + EA  L+ +MV  G+ P  V
Sbjct: 296 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 355

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + NT+I GYC  GD  +A  +  +MV +G+ P   +YN L++    E  M +A  ++ +M
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
             +G++PD ITYN+++ G+ R G    +  +   M+ KG+ P   TYT+LI     +N +
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 467 KEAFRFHDEMLQRGFVPD 484
           KEA    +++L +G  PD
Sbjct: 476 KEADDLFEKILDQGVSPD 493



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 167/330 (50%), Gaps = 35/330 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ +CK+ +++ A     +M + G+ P+ VTYNTLI+ YC +G LE AF   + M  KG
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384

Query: 61  LKPGVFTYNSLINGLCKKGR--------------------------------CDRAKEVL 88
           + P V TYN L++ L  +GR                                C  AK+  
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444

Query: 89  D---EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           D   EML  G+ P   TY +L+    R+  M EA+++F ++  +GV+PD++ F+ ++   
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 504

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
             NG ++RA M  +EM    + PD V +  ++ G CR G V EA  + DEM  +G   D 
Sbjct: 505 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 564

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           ++YNT+++G  R   + +A  + +EML  G  P   T+  LI   CK+   + A  L   
Sbjct: 565 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 624

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           M  K I PD  TY +LI+G   V  + + N
Sbjct: 625 MVNKGISPDDSTYLSLIEGMGNVDTLVEDN 654


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  313 bits (802), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 163/465 (35%), Positives = 259/465 (55%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G+ P   TYNT+++++C+ G ++ A  L+  M  +G  P   T+N LINGL KKG 
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGE 287

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
             +AK ++ EM + GL     TYN L+   C+K  + EA  ++ EM  RGV+P + S +T
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++  F + G++  A     +M    L+PD + Y  +I G+CR G + EA  + DE+  + 
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN 407

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              ++VTYNT+++GLCR   L  A  L  +M+ RG+ PD  T+T L++G CK GNM  A 
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             FD M    + PD   Y   I G  K+G+  KA KL  +M+++   P+ I+Y + +NG 
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +G++ EA  L  +M+  G  P  V+  + +  +  +G   +  E    M+S G  P  
Sbjct: 528 CKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTV 587

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++Y  LI+       +D A A   +M+ +G+VP+VITYNV++ GFC+  +M  +      
Sbjct: 588 VTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIE 647

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           M EKG+ P++ TYT LIN + +    +EA R + +ML +   PD 
Sbjct: 648 MQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDS 692



 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 157/486 (32%), Positives = 278/486 (57%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+++ CK  ++  A   + +M+++G YP  VT+N LIN   ++G L++A  L+  M+  G
Sbjct: 243 MLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAG 302

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+   +TYN LI G CKKG    A  + +EM+  G+SP  A++NT++   C++  MS+A 
Sbjct: 303 LRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDAR 362

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   +M ++ + PDI+S++TLI  F R G +  A +   E++   L  + V Y  +I+G 
Sbjct: 363 QQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGL 422

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  ALK++++M+ +G   DVVTY  ++NG C+   +  A + F+EML  G+ PD 
Sbjct: 423 CRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQ 482

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +T  I G  K G+  KA  L + M  K   PD++TYN  ++G CK+G +E+A +L   
Sbjct: 483 FAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQK 542

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI     P++++Y   ++ +   GH+ E   ++Y+M+ +G  PT+V+   +I  +  +G 
Sbjct: 543 MIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGR 602

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A  +  +M  +GV P+ I+YN LINGF +   MD+A     +M+ +G+ P+  TY +
Sbjct: 603 LDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTI 662

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C  G+  ++  +  +M+ K + PD  T+  L+   + ++   +A +F + ++  G
Sbjct: 663 LINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLK-KLDKDYKVQAVQFIESLILDG 721

Query: 481 FVPDDA 486
               DA
Sbjct: 722 DRTIDA 727



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 236/422 (55%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P V   N ++  L  K    +A EV   M + G+ P   TYNT+L   C+   +  A ++
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             +M  RG  P  V+F+ LI   S+ G+L +A    +EM  AGL      Y  +I GYC+
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCK 319

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G ++EAL + +EM+ +G    V ++NTI+ G C+   +++A    ++ML++ + PD  +
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           + TLI+G C+ GN+ +A  L D +  +++  +IVTYNTLIDG C++G++E A KL  DMI
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI 439

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           +R I P+ ++Y +L+NG C +G++  A   + EM+  G+ P   +    I G  + GD +
Sbjct: 440 NRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTA 499

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           KA +   +M+++G  PD I+YN  +NG  +  N+++A  L+ KM   G VPD +TY   +
Sbjct: 500 KAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFM 559

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
                 G + +   I + M+ +G  P   TYT LI+ H     L  A  +  EM ++G V
Sbjct: 560 HAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVV 619

Query: 483 PD 484
           P+
Sbjct: 620 PN 621



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 223/397 (56%)

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           V ++M++    PD    N +L     K  + +A E++  M   G+ P + +++T++  F 
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + G++ RAL    +M+  G  P  V + ++ING  + G + +A  +  EM + G  +   
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TYN ++ G C+  +L EA  L+ EM+ RGV P   +  T+++G CK+G M+ A      M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            +K++ PDI++YNTLI GFC++G + +A  L  ++  R +S N ++Y  LI+G C +G +
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A +L  +M+ +GI P +V+   ++ G C+ G+   A EF  +M+  G+ PD  +Y   
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G ++  +  KAF L  +M  +G  PDVITYNV + G C+ G + ++  +L +MI  G 
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH 548

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            PD  TYT+ ++ H+   +L+E      +ML RG  P
Sbjct: 549 VPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTP 585



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/332 (35%), Positives = 183/332 (55%), Gaps = 11/332 (3%)

Query: 161 MKSAGLVPDNVL-------YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           MKSA  V + ++         ++I GY       + L + ++M+    + DV   N IL 
Sbjct: 155 MKSAYWVMERIISFEMYGIVDVLIGGYLN----YQCLLVFEKMMRNRFLPDVKNCNRILK 210

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
            L    +L +A +++  M E G+ P   T+ T++H  CK G + +AL+L   M ++   P
Sbjct: 211 ILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYP 270

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
             VT+N LI+G  K GE+++A  L  +M    +  +  +Y  LI GYC  G + EA  LW
Sbjct: 271 SEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALW 330

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EMV +G+ PT+ S NTI+ G+C+ G  S A + LS M+ + + PD ISYNTLI GF R 
Sbjct: 331 EEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRL 390

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            N+ +AF L+ ++  + L  +++TYN ++ G CR G +  +  +   MI +G++PD  TY
Sbjct: 391 GNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTY 450

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           T L+NG     N+  A  F DEML  G  PD 
Sbjct: 451 TVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQ 482


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/519 (33%), Positives = 275/519 (52%), Gaps = 35/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A CK  + D+AK  L EM ++G   +TVTYN LI   CR G +EEAF     M   G
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 182

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  FTY +LINGLCK  R + AK +LDEM    L P+   Y  L+    R+ N  EA 
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 242

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   GV P+ +++  L+    + GQ+DRA +  ++M      PD + Y +II G+
Sbjct: 243 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 302

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R+    +A ++  EM   G   +V TY+ +++GLC++    +A DL  EM  +G+ P+ 
Sbjct: 303 FRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 362

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +  LI G+C++GN++ A  +FD MT+ ++ PD+  YN+LI G  KVG +E++ K +A 
Sbjct: 363 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 422

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + PN  +Y  LI+GY   G +  A +L   M+  G+KP  V    +++ Y +S D
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 482

Query: 361 ASKADEFLSKMVSEGV-----------------------------------DPDSISYNT 385
             K       M+ +GV                                    PD   Y++
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  +  + +KAF ++ +M  +G+ P+++ YN ++ G C+ G +  +  +   ++ KG
Sbjct: 543 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 602

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L P+  TYT+LI+G     ++  AF  ++EML  G  PD
Sbjct: 603 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 641



 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 273/487 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  + + AK  L EM    + P+ V Y  LI+ + REG  +EAF+++  M   G
Sbjct: 193 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 252

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TY++L+ GLCK G+ DRA  +L +M++    PDT TYN ++    R  N  +A 
Sbjct: 253 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAF 312

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM   G++P++ ++S +I    ++G+ ++A     EM + GL P+  +Y  +I+GY
Sbjct: 313 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 372

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V  A ++ D+M +   + D+  YN+++ GL +   + E+   F +M ERG+ P+ 
Sbjct: 373 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 432

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LIHG+ K+G++  A  L   M    +KP+ V Y  L++ + K  ++EK +  +  
Sbjct: 433 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 492

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + +  +   YGILI+   S G++  AFR+  E+   G  P +   +++I G C++ D
Sbjct: 493 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTAD 552

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L +M  +GVDP+ + YN LI+G  +  ++  A  + + +  +GLVP+ +TY  
Sbjct: 553 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 612

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G + ++  +   M+  G+ PD   Y+ L  G  S  +L++A    +EM  RG
Sbjct: 613 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672

Query: 481 FVPDDAF 487
                +F
Sbjct: 673 HASISSF 679



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 266/479 (55%), Gaps = 1/479 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCK  ++D A + L +M +    PDT+TYN +I  + R    ++AF+L++ M   G
Sbjct: 263 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAG 322

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TY+ +I+GLC+ G  ++A ++L+EM   GL P+   Y  L+   CR+ N+S A 
Sbjct: 323 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 382

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF +M++  V PD+  +++LI   S+ G+++ +  YF +M+  GL+P+   Y+ +I+GY
Sbjct: 383 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 442

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG +  A ++   ML+ G   + V Y  +L    ++  + +    F  ML++GV  D 
Sbjct: 443 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 502

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LIH     GNM  A  +   + +    PD+  Y++LI G CK  + EKA  +  +
Sbjct: 503 RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 562

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + PN + Y  LI+G C  G ++ A  ++  ++ KG+ P  V+  ++I G C+ GD
Sbjct: 563 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 622

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A    ++M++ G+ PD+  Y+ L  G     ++++A  L+ +M  +G    + ++N 
Sbjct: 623 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNN 681

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++ GFC++G+M ++  +L  ++ +GL P+  T   +I+G      L E      E+ Q+
Sbjct: 682 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 740



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 245/484 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+   K  ++  A   +  M  +G+ P     N L+    R   +   +++   M G G
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TY++LI   CK    D AK+VL EM + G   +T TYN L+   CR   + EA 
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +M   G+ PD  ++  LI    ++ + + A     EM  A L P+ V+Y  +I+G+
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   EA KM  EM+  G   + +TY+ ++ GLC+   +  A  L  +M+     PD 
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I GH +  N   A  L   M    I P++ TY+ +I G C+ GE EKA+ L  +
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M ++ + PN   Y  LI+GYC  G+V+ A  ++ +M    + P L   N++I G  + G 
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             ++ ++ ++M   G+ P+  +Y+ LI+G+++  +++ A  LV +M + GL P+ + Y  
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L  + +   +         M+++G+  D   Y  LI+   S  N++ AFR   E+ + G
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNG 532

Query: 481 FVPD 484
            VPD
Sbjct: 533 SVPD 536



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 242/452 (53%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           + L++ Y + G +++A +++  M  +GL P +   N+L+  L +        +V + M+ 
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            G+SPD  TY+TL+   C+      A+++  EM  RG   + V+++ LI    R+G ++ 
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A  + ++M+  GLVPD   Y  +ING C++    EA  + DEM       +VV Y  +++
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           G  R     EA  +  EM+  GV P+  T+  L+ G CK G M++A  L   M + S +P
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D +TYN +I+G  +    + A +L ++M +  ISPN  +Y I+I+G C  G   +A  L 
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EM  KG+KP       +I GYCR G+ S A E   KM    V PD   YN+LI G  + 
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             ++++    ++M+ +GL+P+  TY+ ++ G+ + G +  +E ++ RM++ GL P+   Y
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 470

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             L+  +   +++++       ML +G + D+
Sbjct: 471 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 502



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 233/506 (46%), Gaps = 90/506 (17%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG---------------- 44
           M++ LC+  + + A   L EM  KG+ P+   Y  LI+ YCREG                
Sbjct: 333 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 392

Query: 45  -------------------FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                               +EE+ +    M  +GL P  FTY+ LI+G  K G  + A+
Sbjct: 393 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE 452

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +++  ML  GL P+   Y  LL    + +++ +    F  M  +GV  D   +  LI   
Sbjct: 453 QLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 512

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S +G ++ A     E++  G VPD  +Y+ +I+G C+     +A  + DEM +KG   ++
Sbjct: 513 SSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNI 572

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V YN +++GLC++  ++ A ++FN +L +G+ P+  T+T+LI G CK G+++ A  L++ 
Sbjct: 573 VCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNE 632

Query: 266 MTQKSIKPD----------------------------------IVTYNTLIDGFCKVGEM 291
           M    I PD                                  I ++N L+DGFCK G+M
Sbjct: 633 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKM 692

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE---------------- 335
           ++  KL   ++ R + PN ++   +I+G    G ++E   ++ E                
Sbjct: 693 QETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL 752

Query: 336 ---MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
              M+ +G  P  V  + +I+ +C+ G+  KA      +V++       SY  +++   R
Sbjct: 753 FMDMINQGKIPLDV-VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 811

Query: 393 EENMDKAFALVSKMENQG-LVPDVIT 417
           +  + +A  L+ +M+ +G L P ++ 
Sbjct: 812 KGKLSEALNLLKEMDKRGNLQPTLVA 837



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 97/274 (35%), Gaps = 87/274 (31%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   I  A+     +  KG+ P+ VTY +LI+  C+ G +  AF L N M   G
Sbjct: 578 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 637

Query: 61  LKPGVFTY----------------------------------NSLINGLCKKGRCDRAKE 86
           + P  F Y                                  N+L++G CK+G+     +
Sbjct: 638 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLK 697

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR----------------- 129
           +L  ++  GL P+  T   ++        +SE   IF E+ ++                 
Sbjct: 698 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 757

Query: 130 --GVAP-DIV---------------------------------SFSTLIGIFSRNGQLDR 153
             G  P D+V                                 S+  ++    R G+L  
Sbjct: 758 NQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSE 817

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           AL   +EM   G +   ++  + I  + R+  +L
Sbjct: 818 ALNLLKEMDKRGNLQPTLVALLGIFWFRRHHHIL 851


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  312 bits (800), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/484 (35%), Positives = 270/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K+  A++ L ++ Q  + PD  TY +LI  +CR   L+ AF + + M  +G
Sbjct: 204 LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY++LINGLC +GR D A ++L+EM++ G+ P   TY   +   C  E+  EA 
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M +RG  P++ +++ LI   SR G+L+ A+  + +M   GLVP+ V Y  +IN  
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G    ALK+   M   G + +  TYN I+ GLC    + +A  LF +ML+ G  P  
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI+G+   GN+N A  L D+M +   +PD  TYN L+ GF K G++E A+  + +
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   ++PN +SY  LI+G+   G V  A  L   M   G  P + S N +I G  +   
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A++   KMV +G+ P+ I+Y TLI+G  R      AF +   ME +  +P++ TY+ 
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G+  ++E++L  M  KGL PD  T+T+LI+G V    +  AF     M+  G
Sbjct: 624 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMG 683

Query: 481 FVPD 484
             P+
Sbjct: 684 CKPN 687



 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 256/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ A   + +I     FL E+   G      + NTL+    +   +E A  L   M   G
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + T+N+LIN L KKG+   A+ +L ++ Q  LSPD  TY +L++  CR  N+  A 
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M + G  P+ V++STLI      G++D AL    EM   G+ P    YT+ I   
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 313

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      EA+++   M ++GC  +V TY  +++GL R   L  A  L+++ML+ G+ P+ 
Sbjct: 314 CAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNT 373

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+  C  G  + AL +F  M       +  TYN +I G C  G++EKA  L+  
Sbjct: 374 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEK 433

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     P  ++Y  LINGY + G+V  A RL   M   G +P   + N ++ G+ + G 
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGK 493

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A  +  +MV  G++P+ +SY  LI+G  ++  +D A +L+ +ME  G  P+V +YN 
Sbjct: 494 LESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNA 553

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  ++ R  ++E I  +M+E+GL P+  TYTTLI+G       + AF+   +M +R 
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613

Query: 481 FVPD 484
            +P+
Sbjct: 614 CLPN 617



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/428 (34%), Positives = 239/428 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + ++D A   L EM +KG+ P   TY   I A C     EEA +L+  M  +G
Sbjct: 274 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 333

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LI+GL + G+ + A  +  +ML+ GL P+T TYN L+ E C     S A 
Sbjct: 334 CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 393

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M   G   +  +++ +I      G +++A++ F +M   G +P  V Y  +INGY
Sbjct: 394 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V  A ++ D M E GC  D  TYN +++G  +   L  A   F EM+E G+ P+ 
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++T LI GH KDG ++ AL+L   M +    P++ +YN +I+G  K     +A K+   
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + PN I+Y  LI+G C  G    AF+++++M  +   P L + +++I G C+ G 
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A +A+  L +M  +G+ PD +++ +LI+GFV    +D AF L+ +M + G  P+  TY+V
Sbjct: 634 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSV 693

Query: 421 ILTGFCRQ 428
           +L G  ++
Sbjct: 694 LLKGLQKE 701



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 128/223 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+   K  K++SA  +  EM + G+ P+ V+Y  LI+ + ++G ++ A  L+  M   G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V +YN++INGL K+ R   A+++ D+M++ GL P+  TY TL+   CR      A 
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF +M +R   P++ ++S+LI    + G+ D A +  +EM+  GL PD V +T +I+G+
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 663

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
              G +  A  +   M++ GC  +  TY+ +L GL +  +L E
Sbjct: 664 VVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  312 bits (800), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 157/480 (32%), Positives = 276/480 (57%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+++ CK  K+  A   L +M++ G  P+ VTYN L+N     G LE+A +L+  M   G
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG 255

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+   +TY+ LI G C+KG+ D A  + +EML  G  P   TYNT++   C+   +S+A 
Sbjct: 256 LEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDAR 315

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M  + + PD+VS++TLI  ++R G +  A + F E++  GLVP  V Y  +I+G 
Sbjct: 316 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGL 375

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A++++DEM++ G   DV T+  ++ G C+   L  A +LF+EML RG+ PD 
Sbjct: 376 CRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDR 435

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + T I G  K G+ +KA  + + M  +   PD++TYN  IDG  K+G +++A++L   
Sbjct: 436 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P++++Y  +I+ +   GH+ +A  ++ EM+ KGI P++V+   +I  Y   G 
Sbjct: 496 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGR 555

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M  +GV P+ I+YN LING  +   MD+A+   ++M+ +G+ P+  TY +
Sbjct: 556 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTI 615

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C  G   ++  +   M+++ + PD  T++ L+  H++++      R  + ++  G
Sbjct: 616 LINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLK-HLNKDYKSHVVRHLENVIAAG 674



 Score =  311 bits (797), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 168/479 (35%), Positives = 269/479 (56%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +D  ID A+     M + G+ P  VTYNT+++++C++G ++EA QL+  M   G  P   
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TYN L+NGL   G  ++AKE++ EML++GL     TY+ L+   C K  + EA  +  EM
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
             RG  P +V+++T++    + G++  A      M +  L+PD V Y  +I GY R G +
Sbjct: 287 LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 346

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            EA  +  E+  +G V  VVTYNT+++GLCR   L  A  L +EM++ G  PD +TFT L
Sbjct: 347 GEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTIL 406

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           + G CK GN+  A  LFD M  + ++PD   Y T I G  K+G+  KA  +  +M++R  
Sbjct: 407 VRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 466

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I+Y + I+G   +G++ EA  L  +M+  G+ P  V+  +II  +  +G   KA  
Sbjct: 467 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARA 526

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              +M+S+G+ P  ++Y  LI+ +     +  A     +M  +G+ P+VITYN ++ G C
Sbjct: 527 VFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLC 586

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +  +M  +      M  KG++P++ TYT LIN + +  + +EA R + +ML R   PD 
Sbjct: 587 KVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 645



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 155/511 (30%), Positives = 262/511 (51%), Gaps = 39/511 (7%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMN------------------ 54
           + + F     Q G     +TY  +++   R G +  A+ +M                   
Sbjct: 64  ALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILD 123

Query: 55  --------------------SMSGKGLKPGVFTYNSLINGLC-KKGRCDRAKEVLDEMLQ 93
                                M  KG+ P +   N ++  L  +    D A+EV + M++
Sbjct: 124 LLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVE 183

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            G+ P   TYNT+L   C++  + EA ++  +M + G  P+ V+++ L+   S +G+L++
Sbjct: 184 CGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQ 243

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A    +EM   GL      Y  +I GYC  G + EA ++ +EML +G V  +VTYNTI+ 
Sbjct: 244 AKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMY 303

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLC+   +++A  L + M+ + + PD  ++ TLI+G+ + GN+ +A  LF  +  + + P
Sbjct: 304 GLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVP 363

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
            +VTYNTLIDG C++G+++ A +L  +MI     P+  ++ IL+ G+C +G++  A  L+
Sbjct: 364 SVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELF 423

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EM+ +G++P   +  T I G  + GD SKA     +M++ G  PD I+YN  I+G  + 
Sbjct: 424 DEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKL 483

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            N+ +A  LV KM   GLVPD +TY  I+      G +  +  +   M+ KG+ P   TY
Sbjct: 484 GNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTY 543

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           T LI+ +  +  LK A     EM ++G  P+
Sbjct: 544 TVLIHSYAVRGRLKLAILHFFEMHEKGVHPN 574



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR-----MIEK 444
           + ++  ++K   +  KM ++G++PD+   N +L    R  R  DS + + R     M+E 
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVL----RLLRDRDSSIDVAREVYNVMVEC 184

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G+ P   TY T+++    Q  ++EA +   +M + G +P+D 
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 172/518 (33%), Positives = 274/518 (52%), Gaps = 35/518 (6%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A CK  + D+AK  L EM ++G   +TVTYN LI   CR G +EEAF     M   GL
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P  FTY +LINGLCK  R + AK +LDEM    L P+   Y  L+    R+ N  EA +
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  EM   GV P+ +++  L+    + GQ+DRA +  ++M      PD + Y +II G+ 
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R+    +A ++  EM   G   +V TY+ +++GLC++    +A DL  EM  +G+ P+ +
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  LI G+C++GN++ A  +FD MT+ ++ PD+  YN+LI G  KVG +E++ K +A M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R + PN  +Y  LI+GY   G +  A +L   M+  G+KP  V    +++ Y +S D 
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 362 SKADEFLSKMVSEGV-----------------------------------DPDSISYNTL 386
            K       M+ +GV                                    PD   Y++L
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 648

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G  +  + +KAF ++ +M  +G+ P+++ YN ++ G C+ G +  +  +   ++ KGL
Sbjct: 649 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 708

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+  TYT+LI+G     ++  AF  ++EML  G  PD
Sbjct: 709 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 746



 Score =  294 bits (752), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 153/487 (31%), Positives = 272/487 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  + + AK  L EM    + P+ V Y  LI+ + REG  +EAF+++  M   G
Sbjct: 298 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 357

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TY++L+ GLCK G+ DRA  +L +M++    PDT TYN ++    R  +  +A 
Sbjct: 358 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 417

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM   G++P++ ++S +I    ++G+ ++A     EM + GL P+  +Y  +I+GY
Sbjct: 418 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 477

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V  A ++ D+M +   + D+  YN+++ GL +   + E+   F +M ERG+ P+ 
Sbjct: 478 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 537

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LIHG+ K+G++  A  L   M    +KP+ V Y  L++ + K  ++EK +  +  
Sbjct: 538 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 597

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + +  +   YGILI+   S G++  AFR+   +   G  P +   +++I G C++ D
Sbjct: 598 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 657

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L +M  +GVDP+ + YN LI+G  +  ++  A  + + +  +GLVP+ +TY  
Sbjct: 658 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 717

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G + ++  +   M+  G+ PD   Y+ L  G  S  +L++A    +EM  RG
Sbjct: 718 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777

Query: 481 FVPDDAF 487
                +F
Sbjct: 778 HASISSF 784



 Score =  280 bits (717), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 266/479 (55%), Gaps = 1/479 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCK  ++D A + L +M +    PDT+TYN +I  + R    ++AF+L++ M   G
Sbjct: 368 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 427

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TY+ +I+GLC+ G  ++A ++L+EM   GL P+   Y  L+   CR+ N+S A 
Sbjct: 428 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 487

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF +M++  V PD+  +++LI   S+ G+++ +  YF +M+  GL+P+   Y+ +I+GY
Sbjct: 488 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 547

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG +  A ++   ML+ G   + V Y  +L    ++  + +    F  ML++GV  D 
Sbjct: 548 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 607

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LIH     GNM  A  +   + +    PD+  Y++LI G CK  + EKA  +  +
Sbjct: 608 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 667

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + PN + Y  LI+G C  G ++ A  ++  ++ KG+ P  V+  ++I G C+ GD
Sbjct: 668 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 727

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A    ++M++ G+ PD+  Y+ L  G     ++++A  L+ +M  +G    + ++N 
Sbjct: 728 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNN 786

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++ GFC++G+M ++  +L  ++ +GL P+  T   +I+G      L E      E+ Q+
Sbjct: 787 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 845



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 203/383 (53%)

Query: 103 YNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
           + + L   C+      A+++  EM  RG   + V+++ LI    R+G ++ A  + ++M+
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
             GLVPD   Y  +ING C++    EA  + DEM       +VV Y  +++G  R     
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           EA  +  EM+  GV P+  T+  L+ G CK G M++A  L   M + S +PD +TYN +I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +G  +    + A +L ++M +  ISPN  +Y I+I+G C  G   +A  L  EM  KG+K
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P       +I GYCR G+ S A E   KM    V PD   YN+LI G  +   ++++   
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
            ++M+ +GL+P+  TY+ ++ G+ + G +  +E ++ RM++ GL P+   Y  L+  +  
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 584

Query: 463 QNNLKEAFRFHDEMLQRGFVPDD 485
            +++++       ML +G + D+
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDN 607



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 232/506 (45%), Gaps = 90/506 (17%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG---------------- 44
           M++ LC+  + + A   L EM  KG+ P+   Y  LI+ YCREG                
Sbjct: 438 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 497

Query: 45  -------------------FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                               +EE+ +    M  +GL P  FTY+ LI+G  K G  + A+
Sbjct: 498 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE 557

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +++  ML  GL P+   Y  LL    + +++ +    F  M  +GV  D   +  LI   
Sbjct: 558 QLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 617

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S +G ++ A      ++  G VPD  +Y+ +I+G C+     +A  + DEM +KG   ++
Sbjct: 618 SSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNI 677

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V YN +++GLC++  ++ A ++FN +L +G+ P+  T+T+LI G CK G+++ A  L++ 
Sbjct: 678 VCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNE 737

Query: 266 MTQKSIKPD----------------------------------IVTYNTLIDGFCKVGEM 291
           M    I PD                                  I ++N L+DGFCK G+M
Sbjct: 738 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKM 797

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE---------------- 335
           ++  KL   ++ R + PN ++   +I+G    G ++E   ++ E                
Sbjct: 798 QETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL 857

Query: 336 ---MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
              M+ +G  P  V  + +I+ +C+ G+  KA      +V++       SY  +++   R
Sbjct: 858 FMDMINQGKIPLDV-VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 916

Query: 393 EENMDKAFALVSKMENQG-LVPDVIT 417
           +  + +A  L+ +M+ +G L P ++ 
Sbjct: 917 KGKLSEALNLLKEMDKRGNLQPTLVA 942



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 97/274 (35%), Gaps = 87/274 (31%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   I  A+     +  KG+ P+ VTY +LI+  C+ G +  AF L N M   G
Sbjct: 683 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 742

Query: 61  LKPGVFTY----------------------------------NSLINGLCKKGRCDRAKE 86
           + P  F Y                                  N+L++G CK+G+     +
Sbjct: 743 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLK 802

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR----------------- 129
           +L  ++  GL P+  T   ++        +SE   IF E+ ++                 
Sbjct: 803 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 862

Query: 130 --GVAP-DIV---------------------------------SFSTLIGIFSRNGQLDR 153
             G  P D+V                                 S+  ++    R G+L  
Sbjct: 863 NQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSE 922

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           AL   +EM   G +   ++  + I  + R+  +L
Sbjct: 923 ALNLLKEMDKRGNLQPTLVALLGIFWFRRHHHIL 956


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 275/484 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K+  A   + ++ + G  PDTVT++TLIN  C EG + EA +L++ M   G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + T N+L+NGLC  G+   A  ++D M++ G  P+  TY  +L   C+    + A 
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M  R +  D V +S +I    ++G LD A   F EM+  G   D ++YT +I G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +  K+  +M+++    DVV ++ +++   +   L EA++L  EM++RG+ PD 
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI G CK+  ++KA ++ D+M  K   P+I T+N LI+G+CK   ++   +L+  
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  + ++Y  LI G+C +G +  A  L+ EMV + ++P +VS   ++ G C +G+
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E   K+    ++ D   YN +I+G      +D A+ L   +  +G+ PDV TYN+
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G + +++L+  +M E G +P+  TY  LI  H+ + +  ++ +  +E+ + G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592

Query: 481 FVPD 484
           F  D
Sbjct: 593 FSVD 596



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 234/436 (53%), Gaps = 1/436 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LC + K+  A + +  M + G  P+ VTY  ++   C+ G    A +L+  M  + 
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y+ +I+GLCK G  D A  + +EM   G   D   Y TL+   C      +  
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M +R + PD+V+FS LI  F + G+L  A    +EM   G+ PD V YT +I+G+
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A  M D M+ KGC  ++ T+N ++NG C+A ++ +  +LF +M  RGV  D 
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G C+ G +  A  LF  M  + ++PDIV+Y  L+DG C  GE EKA +++  
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+  +   Y I+I+G C+   V +A+ L+  +  KG+KP + + N +I G C+ G 
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+AD    KM  +G  P+  +YN LI   + E +  K+  L+ +++  G   D  T  +
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602

Query: 421 ILTGFCRQGRMHDSEL 436
           ++      GR+  S L
Sbjct: 603 VVD-MLSDGRLKKSFL 617



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 242/477 (50%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D K D A     EM +    P  + ++ L +   R    +    L   M  KG+   ++T
Sbjct: 50  DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            + +IN  C+  +   A   + +++++G  PDT T++TL+   C +  +SEA E+   M 
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G  P +++ + L+     NG++  A++    M   G  P+ V Y  ++   C++G   
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A+++  +M E+   +D V Y+ I++GLC+   L  A +LFNEM  +G   D   +TTLI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G C  G  +    L   M ++ I PD+V ++ LID F K G++ +A +L  +MI R IS
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ ++Y  LI+G+C    + +A  +   MV KG  P + + N +I GYC++       E 
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             KM   GV  D+++YNTLI GF     ++ A  L  +M ++ + PD+++Y ++L G C 
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G    +  I  ++ +  +  D   Y  +I+G  + + + +A+     +  +G  PD
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 76/159 (47%)

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EM     +P L+  + +     R+       +   +M  +G+  +  + + +I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           N   R   +  AF+ + K+   G  PD +T++ ++ G C +GR+ ++  ++ RM+E G  
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P   T   L+NG      + +A    D M++ GF P++ 
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  311 bits (798), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 275/484 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K+  A   + ++ + G  PDTVT++TLIN  C EG + EA +L++ M   G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + T N+L+NGLC  G+   A  ++D M++ G  P+  TY  +L   C+    + A 
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M  R +  D V +S +I    ++G LD A   F EM+  G   D ++YT +I G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +  K+  +M+++    DVV ++ +++   +   L EA++L  EM++RG+ PD 
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI G CK+  ++KA ++ D+M  K   P+I T+N LI+G+CK   ++   +L+  
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  + ++Y  LI G+C +G +  A  L+ EMV + ++P +VS   ++ G C +G+
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E   K+    ++ D   YN +I+G      +D A+ L   +  +G+ PDV TYN+
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G + +++L+  +M E G +P+  TY  LI  H+ + +  ++ +  +E+ + G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592

Query: 481 FVPD 484
           F  D
Sbjct: 593 FSVD 596



 Score =  287 bits (735), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 162/508 (31%), Positives = 264/508 (51%), Gaps = 24/508 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LC + K+  A + +  M + G  P+ VTY  ++   C+ G    A +L+  M  + 
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y+ +I+GLCK G  D A  + +EM   G   D   Y TL+   C      +  
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M +R + PD+V+FS LI  F + G+L  A    +EM   G+ PD V YT +I+G+
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A  M D M+ KGC  ++ T+N ++NG C+A ++ +  +LF +M  RGV  D 
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G C+ G +  A  LF  M  + ++PDIV+Y  L+DG C  GE EKA +++  
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+  +   Y I+I+G C+   V +A+ L+  +  KG+KP + + N +I G C+ G 
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA--------------------F 400
            S+AD    KM  +G  P+  +YN LI   + E +  K+                    F
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRF 602

Query: 401 AL--VSKMENQGLVPDVITYNVILTGFCRQ--GRMHDSELILWRMIEKGLNPDRSTYTTL 456
           AL  +++M   G  PDV T+  +L  FC +    ++D+  +   M   G  P+  TY T+
Sbjct: 603 ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTV 662

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           I G ++ N + +     D+M +RG  P+
Sbjct: 663 IKGLLNGNMISQVPGVLDQMFERGCQPN 690



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 256/488 (52%), Gaps = 24/488 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  +CK  +   A   L +ME++ +  D V Y+ +I+  C++G L+ AF L N M  KG
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  +  Y +LI G C  GR D   ++L +M++  ++PD   ++ L+    ++  + EAE
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM +RG++PD V++++LI  F +  QLD+A      M S G  P+   + I+INGY
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + + L++  +M  +G V D VTYNT++ G C    L  A +LF EM+ R V PD 
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  L+ G C +G   KAL +F+ + +  ++ DI  YN +I G C   +++ A  L+  
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + P+  +Y I+I G C  G ++EA  L+ +M   G  P   + N +I+ +   GD
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577

Query: 361 ASKADEF----------------------LSKMVSEGVDPDSISYNTLINGFVREENMD- 397
           A+K+ +                       L++M+  G +PD  ++ TL+  F  EEN   
Sbjct: 578 ATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASV 637

Query: 398 -KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
             A  L   M+  G  P+V+TYN ++ G      +     +L +M E+G  P+  T +T 
Sbjct: 638 YDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTF 697

Query: 457 INGHVSQN 464
           I+G   Q+
Sbjct: 698 ISGLCKQD 705



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 242/477 (50%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D K D A     EM +    P  + ++ L +   R    +    L   M  KG+   ++T
Sbjct: 50  DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            + +IN  C+  +   A   + +++++G  PDT T++TL+   C +  +SEA E+   M 
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G  P +++ + L+     NG++  A++    M   G  P+ V Y  ++   C++G   
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A+++  +M E+   +D V Y+ I++GLC+   L  A +LFNEM  +G   D   +TTLI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G C  G  +    L   M ++ I PD+V ++ LID F K G++ +A +L  +MI R IS
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ ++Y  LI+G+C    + +A  +   MV KG  P + + N +I GYC++       E 
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             KM   GV  D+++YNTLI GF     ++ A  L  +M ++ + PD+++Y ++L G C 
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G    +  I  ++ +  +  D   Y  +I+G  + + + +A+     +  +G  PD
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 228/446 (51%), Gaps = 26/446 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   + D     L +M ++ + PD V ++ LI+ + +EG L EA +L   M  +G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TY SLI+G CK+ + D+A  +LD M+  G  P+  T+N L+   C+   + +  
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F +MS RGV  D V+++TLI  F   G+L+ A   F+EM S  + PD V Y I+++G 
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C NG   +AL++ +++ +    +D+  YN I++G+C A  + +A DLF  +  +GV PD 
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL--- 297
            T+  +I G CK G++++A  LF  M +    P+  TYN LI      G+  K+ KL   
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587

Query: 298 -------------------WADMISRKISPNYISYGILINGYC--SMGHVTEAFRLWYEM 336
                               A M+     P+  ++  L+  +C      V +A  L+  M
Sbjct: 588 IKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNM 647

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
              G KP +V+ NT+IKG       S+    L +M   G  P++++ +T I+G  +++  
Sbjct: 648 KAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLH 707

Query: 397 DKAFALVSKMENQGLVPDVITYNVIL 422
             A  L+ KMEN     DV T   IL
Sbjct: 708 GSAILLLRKMENDN--EDVTTKKKIL 731



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 76/159 (47%)

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EM     +P L+  + +     R+       +   +M  +G+  +  + + +I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           N   R   +  AF+ + K+   G  PD +T++ ++ G C +GR+ ++  ++ RM+E G  
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P   T   L+NG      + +A    D M++ GF P++ 
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  311 bits (797), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 171/484 (35%), Positives = 269/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K+  A++ L ++ Q  + PD  TY +LI  +CR   L+ AF + + M  +G
Sbjct: 246 LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG 305

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY++LINGLC +GR D A ++L+EM++ G+ P   TY   +   C  E+  EA 
Sbjct: 306 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 365

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M +RG  P++ +++ LI   SR G+L+ A+  + +M   GLVP+ V Y  +IN  
Sbjct: 366 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 425

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G    ALK+   M   G + +  TYN I+ GLC    + +A  LF +ML+ G  P  
Sbjct: 426 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 485

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI+G+   GN+N A  L D+M +   +PD  TYN L+ GF K G++E A+  + +
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 545

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   ++PN +SY  LI+G+   G V  A  L   M   G  P + S N +I G  +   
Sbjct: 546 MVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENR 605

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A++   KM  +G+ P+ I+Y TLI+G  R      AF +   ME +  +P++ TY+ 
Sbjct: 606 FSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 665

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G+  ++E++L  M  KGL PD  T+T+LI+G V    +  AF     M+  G
Sbjct: 666 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVG 725

Query: 481 FVPD 484
             P+
Sbjct: 726 CKPN 729



 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 168/508 (33%), Positives = 272/508 (53%), Gaps = 24/508 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + ++D A   L EM +KG+ P   TY   I A C     EEA +L+  M  +G
Sbjct: 316 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 375

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LI+GL + G+ + A  +  +ML+ GL P+T TYN L+ E C     S A 
Sbjct: 376 CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 435

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M   G   +  +++ +I      G +++A++ F +M   G +P  V Y  +INGY
Sbjct: 436 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 495

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V  A ++ D M E GC  D  TYN +++G  +   L  A   F EM+E G+ P+ 
Sbjct: 496 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 555

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++TTLI GH KDG ++ AL+L + M +    P++ +YN +I+G  K     +A K+   
Sbjct: 556 VSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 615

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + PN I+Y  LI+G C  G    AF+++++M  +   P L + +++I G C+ G 
Sbjct: 616 MAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 675

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A +A+  L +M  +G+ PD +++ +LI+GFV    +D AF L+ +M + G  P+  TY+V
Sbjct: 676 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSV 735

Query: 421 ILTGFCRQGRM-----------------HDSEL-------ILWRMIEKGLNPDRSTYTTL 456
           +L G  ++  +                 H+ ++       +L RM E G  P   TY+TL
Sbjct: 736 LLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTL 795

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++G   +    EA +   +M +RGF PD
Sbjct: 796 VSGLCRKGRFYEAEQLVKDMKERGFCPD 823



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 159/484 (32%), Positives = 256/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ A   + +I     FL E+   G      + NTL+    +   +E A  L   M   G
Sbjct: 176 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 235

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + T+N+LIN L KKG+   A+ +L ++ Q  LSPD  TY +L++  CR  N+  A 
Sbjct: 236 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 295

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M + G  P+ V++STLI      G++D AL    EM   G+ P    YT+ I   
Sbjct: 296 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 355

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      EA+++   M ++GC  +V TY  +++GL R   L  A  L+++ML+ G+ P+ 
Sbjct: 356 CAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNT 415

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+  C  G  + AL +F  M       +  TYN +I G C  G++EKA  L+  
Sbjct: 416 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEK 475

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     P  ++Y  LINGY + G+V  A RL   M   G +P   + N ++ G+ + G 
Sbjct: 476 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGK 535

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A  +  +MV  G++P+ +SY TLI+G  ++  +D A +L+ +ME  G  P+V +YN 
Sbjct: 536 LESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNA 595

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  ++ R  ++E I  +M E+GL P+  TYTTLI+G       + AF+   +M +R 
Sbjct: 596 VINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 655

Query: 481 FVPD 484
            +P+
Sbjct: 656 CLPN 659



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 158/510 (30%), Positives = 266/510 (52%), Gaps = 26/510 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +  K++ A     +M ++G+ P+TVTYN LIN  C  G    A ++ + M G G
Sbjct: 386 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 445

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 TYN +I GLC  G  ++A  + ++ML+MG  P   TYNTL+     K N++ A 
Sbjct: 446 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 505

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G  PD  +++ L+  FS+ G+L+ A  YF+EM   GL P+ V YT +I+G+
Sbjct: 506 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGH 565

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G V  AL + + M E GC  +V +YN ++NGL +    +EA+ + ++M E+G+ P+ 
Sbjct: 566 SKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNV 625

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI G C++G    A  +F  M ++   P++ TY++LI G C+ G+ ++A  L  +
Sbjct: 626 ITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKE 685

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR--- 357
           M  + ++P+ +++  LI+G+  +G +  AF L   MV  G KP   + + ++KG  +   
Sbjct: 686 MERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECL 745

Query: 358 --------------SGDASKAD-------EFLSKMVSEGVDPDSISYNTLINGFVREENM 396
                         S    + D         L++M   G +P   +Y+TL++G  R+   
Sbjct: 746 LLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRF 805

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTT 455
            +A  LV  M+ +G  PD   Y  +L   C+   + D  L ++  IE KG     S Y  
Sbjct: 806 YEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEV-DHALKIFHSIEAKGFQLHLSIYRA 864

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           LI        ++EA    D ML++ +  D+
Sbjct: 865 LICALCKAGQVEEAQALFDNMLEKEWNADE 894



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 155/482 (32%), Positives = 248/482 (51%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L K   ++ A+    +M   G+ P  +T+NTLIN   ++G + EA  +++ +    L P 
Sbjct: 215 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 274

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           VFTY SLI G C+    D A  V D M++ G  P++ TY+TL+   C +  + EA ++  
Sbjct: 275 VFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE 334

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM  +G+ P + +++  I         + A+     MK  G  P+   YT +I+G  R G
Sbjct: 335 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 394

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            +  A+ +  +ML++G V + VTYN ++N LC     + A  +F+ M   G   +  T+ 
Sbjct: 395 KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 454

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            +I G C  G++ KA+ LF+ M +    P +VTYNTLI+G+   G +  A +L   M   
Sbjct: 455 EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 514

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+  +Y  L++G+   G +  A   + EMV  G+ P  VS  T+I G+ + G    A
Sbjct: 515 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIA 574

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
              L +M   G +P+  SYN +ING  +E    +A  +  KM  QGL+P+VITY  ++ G
Sbjct: 575 LSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDG 634

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            CR GR   +  I   M ++   P+  TY++LI G   +    EA     EM ++G  PD
Sbjct: 635 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 694

Query: 485 DA 486
           + 
Sbjct: 695 EV 696



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 252/508 (49%), Gaps = 24/508 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC   +  +A      ME  G   +T TYN +I   C  G +E+A  L   M   G
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 480

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+LING   KG  + A  +LD M + G  PD  TYN L+    +   +  A 
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 540

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F EM   G+ P+ VS++TLI   S++G++D AL     M+  G  P+   Y  +ING 
Sbjct: 541 FYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +     EA K+ D+M E+G + +V+TY T+++GLCR      A  +F++M +R   P+ 
Sbjct: 601 SKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 660

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+++LI+G C++G  ++A  L   M +K + PD VT+ +LIDGF  +G ++ A  L   
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 720

Query: 301 MISRKISPNYISYGILING-------------------YCSMGHVTEA-FRLWYEMVGK- 339
           M+     PNY +Y +L+ G                   Y    H  +  F +   ++ + 
Sbjct: 721 MVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARM 780

Query: 340 ---GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
              G +PTL + +T++ G CR G   +A++ +  M   G  PD   Y +L+    +   +
Sbjct: 781 SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEV 840

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           D A  +   +E +G    +  Y  ++   C+ G++ +++ +   M+EK  N D   +T L
Sbjct: 841 DHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVL 900

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++G + +  L    +    M  + F P+
Sbjct: 901 VDGLLKEGELDLCMKLLHIMESKNFTPN 928



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 222/435 (51%), Gaps = 11/435 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+   K  K++SA  +  EM + G+ P+ V+Y TLI+ + ++G ++ A  L+  M   G
Sbjct: 526 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMG 585

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V +YN++INGL K+ R   A+++ D+M + GL P+  TY TL+   CR      A 
Sbjct: 586 CNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAF 645

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF +M +R   P++ ++S+LI    + G+ D A +  +EM+  GL PD V +T +I+G+
Sbjct: 646 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 705

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G +  A  +   M++ GC  +  TY+ +L GL +  +L E                 
Sbjct: 706 VVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQH-------EAV 758

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y+F+     H KD N     NL   M++   +P + TY+TL+ G C+ G   +A +L  D
Sbjct: 759 YSFSP----HEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 814

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R   P+   Y  L+  +C    V  A ++++ +  KG +  L     +I   C++G 
Sbjct: 815 MKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQ 874

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A      M+ +  + D I +  L++G ++E  +D    L+  ME++   P++ TY +
Sbjct: 875 VEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVI 934

Query: 421 ILTGFCRQGRMHDSE 435
           +     R G+  +SE
Sbjct: 935 LGRELSRIGKSIESE 949



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 203/395 (51%), Gaps = 24/395 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   KD K+D A   L  ME+ G  P+  +YN +IN   +E    EA ++ + M+ +G
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY +LI+GLC+ GR   A ++  +M +    P+  TY++L+   C++    EAE
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 680

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM R+G+APD V+F++LI  F   G++D A +  R M   G  P+   Y++++ G 
Sbjct: 681 ILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGL 740

Query: 181 CRNGFVLE-ALKMRDE-----------------------MLEKGCVMDVVTYNTILNGLC 216
            +   +LE  + ++ E                       M E GC   + TY+T+++GLC
Sbjct: 741 QKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLC 800

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
           R     EA+ L  +M ERG  PD   + +L+  HCK+  ++ AL +F  +  K  +  + 
Sbjct: 801 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 860

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            Y  LI   CK G++E+A  L+ +M+ ++ + + I + +L++G    G +    +L + M
Sbjct: 861 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 920

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
             K   P + +   + +   R G + +++    K+
Sbjct: 921 ESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  311 bits (797), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 152/456 (33%), Positives = 257/456 (56%), Gaps = 1/456 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD++TY+TLIN +C+    ++A++L++ M  +G+ P    YN++I GLC  GR D A   
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M Q   +P   TY  L+   C+   +S+A  I  +M   G AP++V+++TLI  F +
Sbjct: 225 YRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 283

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +D A++ F +M      PD   Y I+I+GYC+     +  K+  EM++ GC  + +T
Sbjct: 284 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 343

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT+++ L ++    +A +L   ML R   P  +TF  +I   CK G ++ A  LF +MT
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 403

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            +   PDI TYN +I G C+   ++ A +L   M      P+ ++Y  +++G C    V 
Sbjct: 404 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 463

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA+ ++  +   G    +V+C+T+I G C+S     A++ L +M   G  PD ++Y  LI
Sbjct: 464 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 523

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +GF + + +DK+ A  S+M ++G VP VITY++++   C+  R+ D  ++L  M+E+G+ 
Sbjct: 524 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVT 583

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           PD   YT++I+G    ++  EA+  +  M Q G  P
Sbjct: 584 PDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAP 619



 Score =  307 bits (787), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 164/481 (34%), Positives = 260/481 (54%), Gaps = 2/481 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK  +I  A + L +M + G  P+ VTYNTLIN +C+ G ++EA  L N M    
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTYN LI+G CK+ R     ++L EM++ G  P+  TYNTL+    +     +A 
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M RR   P   +F+ +I +F + GQLD A   F+ M   G +PD   Y I+I+G 
Sbjct: 362 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 421

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   + +A ++ + M E GC  DVVTYN+I++GLC+A  + EA +++  +   G F D 
Sbjct: 422 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 481

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T +TLI G CK   ++ A  L   M +    PD+V Y  LI GFCK  +++K+   +++
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   P  I+Y I+I+  C    V +   L   M+ +G+ P  +   ++I G C+S  
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E    M   G  P  ++YN L++   +   +D+A  L+  ME+ G +PD +TYN 
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNS 661

Query: 421 ILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +  GF +    HD    L++ M  +G +P    Y+ L+   V++  + +A    +E L+ 
Sbjct: 662 VFDGFWKSAE-HDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEA 720

Query: 480 G 480
           G
Sbjct: 721 G 721



 Score =  290 bits (743), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 260/483 (53%), Gaps = 1/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC + ++DSA +   +M Q+   P  +TY  L++A C+   + +A  ++  M   G
Sbjct: 208 IIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAG 266

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+LING CK G  D A  + ++ML+   SPD  TYN L+   C++E   +  
Sbjct: 267 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGA 326

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM + G  P+ ++++TL+    ++G+   A    + M      P +  + ++I+ +
Sbjct: 327 KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 386

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++   M ++GC+ D+ TYN +++G CRA  + +A  L   M E G  PD 
Sbjct: 387 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 446

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++ G CK   +++A  +++++       D+VT +TLIDG CK   ++ A KL  +
Sbjct: 447 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 506

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     +P+ ++Y ILI+G+C    + ++   + EM+ KG  PT+++ + +I   C+S  
Sbjct: 507 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 566

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                  L  M+  GV PD+I Y ++I+G  + ++ D+A+ L   M+  G  P V+TYNV
Sbjct: 567 VRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNV 626

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C+  R+ ++  +L  M   G  PD  TY ++ +G        +AFR    M  RG
Sbjct: 627 LVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG 686

Query: 481 FVP 483
             P
Sbjct: 687 CSP 689



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 235/456 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK   +D A +   +M +    PD  TYN LI+ YC++   ++  +L+  M   G
Sbjct: 277 LINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG 336

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TYN+L++ L K G+   A  +   ML+    P   T+N ++   C+   +  A 
Sbjct: 337 CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAY 396

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M+ RG  PDI +++ +I    R  ++D A      M  AG  PD V Y  I++G 
Sbjct: 397 ELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 456

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA ++ + +   G  +DVVT +T+++GLC+++ L +A+ L  EM   G  PD 
Sbjct: 457 CKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 516

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T LIHG CK   ++K+L  F  M  K   P ++TY+ +ID  CK   +     L   
Sbjct: 517 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 576

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R ++P+ I Y  +I+G C      EA+ L+  M   G  PT+V+ N ++   C+   
Sbjct: 577 MLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSR 636

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L  M S+G  PD+++YN++ +GF +    DKAF L   M+++G  P    Y++
Sbjct: 637 LDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSL 696

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           +LT    + +M  +  I    +E G + D     TL
Sbjct: 697 LLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 34/179 (18%)

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           G K +  +CN ++  + R   A +A +           PDSI+Y+TLINGF +  +  +A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186

Query: 400 FALVSKMENQGLV----------------------------------PDVITYNVILTGF 425
           + L+ +ME +G+V                                  P VITY +++   
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDAL 246

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+  R+ D+ LIL  MIE G  P+  TY TLING     N+ EA    ++ML+    PD
Sbjct: 247 CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 305



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 394 ENMDKAFALVSKMENQ-GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL-NPDRS 451
           +++DKA         Q G      T N +L+ F R+ +  ++   L++    GL +PD  
Sbjct: 110 DDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEA-YDLFKNHRCGLCSPDSI 168

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           TY+TLING     + ++A+R  DEM +RG VP +A
Sbjct: 169 TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNA 203


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  311 bits (796), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 172/522 (32%), Positives = 277/522 (53%), Gaps = 39/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C+   +  A+  L  M++ G+ P   TYNTL++A+ R G++++A +++ SM+  G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKEN-MSE 118
            +P + TYN L  GLC+ G+ D A  + DEM ++G + PD  TYNTL V++C K    S+
Sbjct: 309 FEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTL-VDACFKWRCSSD 367

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  EM  +GV P +V+ + ++    + G+L+ AL    ++   GL PD + Y  +I+
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            YC+ G V +A  + DEM+ KG  MD  T NT+L  LC+ K   +A++L +   +RG  P
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  ++ T++  + K+ N   AL L+D M ++ + P I TYNTLI G C++  +++A    
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            + + + + P+  +Y I+I+ YC  G +  AFR   +MV    KP +V+CNT++ G C  
Sbjct: 548 NEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA +     V +G   D I+YNTLI    +  ++D A      ME +GL PD  TY
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKG----------LNPDRS----------------- 451
           NV+L+     GR  ++  +L ++ + G          L P  +                 
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESS 727

Query: 452 ---------TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                    TY   +NG  +   LKEA    DEM+Q+G   D
Sbjct: 728 EKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVD 769



 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 154/510 (30%), Positives = 253/510 (49%), Gaps = 38/510 (7%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREG--FLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +A++      ++GV P     N +++A  R      + +  +  S+    L P  +T+N 
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++  C KG    A   L  M   GLSPD  TYNTLL   CRK  + EA  +   M R G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +AP   +++TL+  F+R G + +A      M + G  PD   Y ++  G C+ G V EA 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333

Query: 191 KMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           +++DEM   G  + DVVTYNT+++   + +  ++A  L  EM ++GV P   T   ++  
Sbjct: 334 RLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI------- 302
            CK+G + +AL   + + ++ + PD++TYNTLID +CK G + KA  L  +M+       
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 303 ----------------------------SRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
                                        R   P+ +SYG ++  Y    +   A RLW 
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           +M+ + + P++ + NT+IKG CR     +A + L++ V +G+ PD  +YN +I+ + +E 
Sbjct: 514 QMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEG 573

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           +++ AF   +KM      PDV+T N ++ G C  G++  +  +    +EKG   D  TY 
Sbjct: 574 DLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYN 633

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TLI       ++  A  F D+M  +G  PD
Sbjct: 634 TLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 172/361 (47%), Gaps = 38/361 (10%)

Query: 128 RRGVAPDIVSFSTLIGIFSRN-GQLDRA-LMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           RRGV P + + + ++   SR+   L +A L  FR +    L P++  + ++++ +C    
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHC---- 219

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
                        KG + D +   + + G                    G+ PD  T+ T
Sbjct: 220 ------------SKGTLADALATLSTMQGF-------------------GLSPDAVTYNT 248

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L++ HC+ G + +A  L   M +  I P   TYNTL+  F ++G +++A K+   M +  
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK-PTLVSCNTIIKGYCRSGDASKA 364
             P+  +Y +L  G C  G V EAFRL  EM   G   P +V+ NT++    +   +S A
Sbjct: 309 FEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDA 368

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
              L +M  +GV P  +++N ++    +E  +++A   + K+  +GL PDVITYN ++  
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +C+ G +  +  ++  M+ KGL  D  T  T++         ++A        QRGFVPD
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 485 D 485
           +
Sbjct: 489 E 489



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 130/253 (51%), Gaps = 1/253 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  ++  A   L E  +KG+ PD  TYN +I+AYC+EG LE AF+  N M    
Sbjct: 530 LIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENS 589

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V T N+L+NGLC  G+ D+A ++ +  ++ G   D  TYNTL+   C+  ++  A 
Sbjct: 590 FKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTAL 649

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M  +G+ PD  +++ ++   S  G+ + A     ++  +G +  +    ++    
Sbjct: 650 HFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSS 709

Query: 181 CRNGFVLEAL-KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
                V E   K   E  EK     + TY   LNGLC    L EA  + +EM+++G+  D
Sbjct: 710 ADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVD 769

Query: 240 FYTFTTLIHGHCK 252
             T+ TL+ G  K
Sbjct: 770 CSTYITLMEGLIK 782


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  311 bits (796), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 273/487 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K       + F  +M   G+ P   TYN +I+  C+EG LE + +L   M   G
Sbjct: 201 LLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 260

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TYNSLI+G  K G  +    + +EM  +G  PD  TYN L+   C+ E M  A 
Sbjct: 261 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 320

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E F EM   G+ P++V++STLI  F + G +  A+    +M+  GL+P+   YT +I+  
Sbjct: 321 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDAN 380

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA K+ ++ML+ G  +++VTY  +L+GLC+A  + EA+++F  ML+ G+ P+ 
Sbjct: 381 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 440

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T L+HG+ K   M  A+ +   MT+ +IKPD++ Y ++I G C   ++E+   +  +
Sbjct: 441 QVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE 500

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR IS N +    +I+ Y   G  ++A   + EM   G++ T+V+   +I G C +G 
Sbjct: 501 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGI 560

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A ++  +M+S G+ P+   Y +LI+G      ++ A  L  +M+ +G+ PD+  +  
Sbjct: 561 VELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTA 620

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + G + ++ +++ RM E  +  D   YT+L++G      L +A +F +EM+++G
Sbjct: 621 LIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 680

Query: 481 FVPDDAF 487
            +P++  
Sbjct: 681 ILPEEVL 687



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 239/453 (52%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            ++ L + +   G LEEA +  + M      P   + N L++ L K G     ++  ++M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           +  G++P   TYN ++   C++ ++  +  +F +M   G++PD+V++++LI  + + G L
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           +     F EMK  G VPD + Y  +IN YC+   +  A +   EM   G   +VVTY+T+
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++  C+  M+  A  L  +M   G+ P+ +T+T+LI  +CK GN+ +A  L + M Q  +
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           K +IVTY  L+DG CK G M +A +++  M+   ISPN   Y  L++GY     + +A +
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +  +M    IKP L+   +II G+C      +    L +M S G+  + +   T+I+ + 
Sbjct: 462 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 521

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +      A     +M++ G+   ++TY V++ G C  G +  +     RM+  GL P+ +
Sbjct: 522 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVA 581

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            YT+LI+G    N ++ A +  DEM  RG  PD
Sbjct: 582 VYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPD 614



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 244/476 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK+  +++++    +M + G+ PD VTYN+LI+ Y + G LEE   L N M   G
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 295

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN LIN  CK  +  RA E   EM   GL P+  TY+TL+   C++  M  A 
Sbjct: 296 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAI 355

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M R G+ P+  ++++LI    + G L  A     +M  AG+  + V YT +++G 
Sbjct: 356 KLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 415

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA ++   ML+ G   +   Y  +++G  +A+ + +A  +  +M E  + PD 
Sbjct: 416 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 475

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + ++I GHC    + +   + + M  + I  + V   T+ID + K G+   A   + +
Sbjct: 476 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 535

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +    ++Y +LI+G C  G V  A   +  M+  G++P +    ++I G C +  
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   +M   G+ PD  ++  LI+G ++  N+ +A  L+S+M    +  D+  Y  
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 655

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +++GF + G +H +      MIEKG+ P+      L+  +  +  L EA    +EM
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 223/407 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  K+  A  +  EM+  G+ P+ VTY+TLI+A+C+EG ++ A +L+  M   G
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  FTY SLI+  CK G    A ++L++MLQ G+  +  TY  LL   C+   M EAE
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M + G++P+   ++ L+  + +  +++ A+   ++M    + PD +LY  II G+
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 485

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + E   + +EM  +G   + V   TI++   +A   ++A + F EM + GV    
Sbjct: 486 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 545

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G C+ G +  A++ F  M    ++P++  Y +LIDG C    +E A KL+ +
Sbjct: 546 VTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDE 605

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R ++P+  ++  LI+G    G++ EA  L   M    I+  L    +++ G+ + G+
Sbjct: 606 MQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGE 665

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
             +A +F ++M+ +G+ P+ +    L+  + +   +D+A  L ++ME
Sbjct: 666 LHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 712



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 153/319 (47%), Gaps = 35/319 (10%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV     ++ + +      +L EA++ F+ M      P   +   L+H   K GN     
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             F+ M    I P + TYN +ID  CK G++E + +L+  M    +SP+ ++Y  LI+GY
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G + E   L+ EM   G  P +++ N +I  YC+     +A E+ S+M + G+ P+ 
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVP--------------------------- 413
           ++Y+TLI+ F +E  M  A  L+  M   GL+P                           
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 414 --------DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
                   +++TY  +L G C+ GRM ++E +   M++ G++P++  YT L++G++    
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +++A +   +M +    PD
Sbjct: 456 MEDAMKILKQMTECNIKPD 474



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 147/295 (49%), Gaps = 21/295 (7%)

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERG----------VFPDFYT-----------FTT 245
           +Y  I++ + RA+M T+A D   E++             +F   ++           F  
Sbjct: 106 SYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDV 165

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L     + G + +A   F  M      P   + N L+    K G  +   K + DMI   
Sbjct: 166 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 225

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I+P+  +Y ++I+  C  G +  + RL+ +M   G+ P +V+ N++I GY + G   +  
Sbjct: 226 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 285

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
              ++M   G  PD I+YN LIN + + E M +AF   S+M+N GL P+V+TY+ ++  F
Sbjct: 286 SLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 345

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           C++G M  +  +L  M   GL P+  TYT+LI+ +    NL EA++  ++MLQ G
Sbjct: 346 CKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 72/128 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC ++ I+SAK    EM+ +G+ PD   +  LI+   + G L+EA  L++ M+   
Sbjct: 586 LIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  +  Y SL++G  + G   +A++  +EM++ G+ P+      LL E  ++  + EA 
Sbjct: 646 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705

Query: 121 EIFCEMSR 128
           E+  EM R
Sbjct: 706 ELKNEMER 713


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  311 bits (796), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 170/484 (35%), Positives = 272/484 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L  ++ +  AK     MEQ G+ P  VTYNT++++YC+EG +++A +L++ M  +G
Sbjct: 186 ILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERG 245

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN L+NGL KKG  ++AK +++EML  GL+    TYN L+   C+K    EA 
Sbjct: 246 CYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAF 305

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  R   P + +++TL+    +  Q+    + F +M  +   PD V +  ++ GY
Sbjct: 306 DLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGY 365

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EA  + DE+  +  V  V+TYNT+++GLC    L  A  L  EM ++G+FPD 
Sbjct: 366 CRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDI 425

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+T L++G  K G ++ A   F+ M  K +KPD   YNT I G  K+ +   A  +  +
Sbjct: 426 FTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEE 485

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    P+ I+Y + ++  C  G+  EA  L   MV  G+ P  V+  +II G+ ++G 
Sbjct: 486 MLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGH 545

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E  ++M+S+GV P  ++Y  LI+    ++ +D AF   SKM  + +  +VITYN 
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+ G C   RM ++      M EKG+ P++ +YT LIN   +    +EA R + EML R 
Sbjct: 606 IINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRK 665

Query: 481 FVPD 484
             PD
Sbjct: 666 IQPD 669



 Score =  297 bits (761), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 148/473 (31%), Positives = 263/473 (55%), Gaps = 6/473 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+++ CK+ ++D A   L EM+++G YP+ VTYN L+N   ++G LE+A  L+  M   G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L    +TYN LING C+KG    A ++++EM+     P  +TYNTL+   C+   ++   
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M +    PDIVSF++L+  + R G +  A + F E+K   LVP  + Y  +I+G 
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G++  AL+++ EM ++G   D+ TY  ++NG  +   ++ A   FNEML +G+ PD 
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + T I G  K  + + A ++ + M      PD++TYN  +   C+ G  E+A  L  +
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P++++Y  +ING+   GH+ +A  ++ EM+ KG+ P++V+   +I  +     
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A  + SKM+ + V  + I+YN +ING      MD+A+    +ME +G++P+  +Y +
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           ++   C  G   ++  +   M+++ + PD  T++  +       NL   ++ H
Sbjct: 641 LINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL------KNLHRDYQVH 687



 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 242/435 (55%), Gaps = 1/435 (0%)

Query: 52  LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC 111
           + + M   GL P V   N ++  L  +    +AK V   M Q G+ P   TYNT+L   C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           ++  + +A E+  EM  RG  P+ V+++ L+   S+ G+L++A     EM ++GL     
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            Y  +ING+C+ G  +EA  + +EM+ +     + TYNT++ GLC+   +T     F++M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           L+    PD  +F +L++G+C+ G +++A  LFD +  + + P ++TYNTLI G C  G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           + A +L  +M  + + P+  +Y IL+NG   +G+V+ A   + EM+ KG+KP   + NT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I G  +  D S A     +M++ G  PD I+YN  ++   ++ N ++A  L+  M + GL
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           +PD +TY  I+ GF + G +  +  +   M+ KG+ P   TYT LI+ H ++  L  AF 
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 472 FHDEMLQRGFVPDDA 486
           +  +ML++  VP + 
Sbjct: 587 YFSKMLEKS-VPANV 600



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 6/239 (2%)

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI GH         L +FD M +  + PD+   N ++        + KA  ++  M   
Sbjct: 156 VLIAGHVX------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQF 209

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            I P  ++Y  +++ YC  G V +A  L  EM  +G  P  V+ N ++ G  + G+  +A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
              + +M++ G++  + +YN LINGF ++    +AF LV +M N+   P + TYN ++ G
Sbjct: 270 KGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            C+  ++    L    M++    PD  ++ +L+ G+     + EAF   DE+  R  VP
Sbjct: 330 LCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  311 bits (796), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 170/484 (35%), Positives = 272/484 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L  ++ +  AK     MEQ G+ P  VTYNT++++YC+EG +++A +L++ M  +G
Sbjct: 186 ILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERG 245

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN L+NGL KKG  ++AK +++EML  GL+    TYN L+   C+K    EA 
Sbjct: 246 CYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAF 305

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  R   P + +++TL+    +  Q+    + F +M  +   PD V +  ++ GY
Sbjct: 306 DLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGY 365

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EA  + DE+  +  V  V+TYNT+++GLC    L  A  L  EM ++G+FPD 
Sbjct: 366 CRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDI 425

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+T L++G  K G ++ A   F+ M  K +KPD   YNT I G  K+ +   A  +  +
Sbjct: 426 FTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEE 485

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    P+ I+Y + ++  C  G+  EA  L   MV  G+ P  V+  +II G+ ++G 
Sbjct: 486 MLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGH 545

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E  ++M+S+GV P  ++Y  LI+    ++ +D AF   SKM  + +  +VITYN 
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+ G C   RM ++      M EKG+ P++ +YT LIN   +    +EA R + EML R 
Sbjct: 606 IINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRK 665

Query: 481 FVPD 484
             PD
Sbjct: 666 IQPD 669



 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 148/473 (31%), Positives = 263/473 (55%), Gaps = 6/473 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+++ CK+ ++D A   L EM+++G YP+ VTYN L+N   ++G LE+A  L+  M   G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L    +TYN LING C+KG    A ++++EM+     P  +TYNTL+   C+   ++   
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M +    PDIVSF++L+  + R G +  A + F E+K   LVP  + Y  +I+G 
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G++  AL+++ EM ++G   D+ TY  ++NG  +   ++ A   FNEML +G+ PD 
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + T I G  K  + + A ++ + M      PD++TYN  +   C+ G  E+A  L  +
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P++++Y  +ING+   GH+ +A  ++ EM+ KG+ P++V+   +I  +     
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A  + SKM+ + V  + I+YN +ING      MD+A+    +ME +G++P+  +Y +
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           ++   C  G   ++  +   M+++ + PD  T++  +       NL   ++ H
Sbjct: 641 LINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL------KNLHRDYQVH 687



 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 242/435 (55%), Gaps = 1/435 (0%)

Query: 52  LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC 111
           + + M   GL P V   N ++  L  +    +AK V   M Q G+ P   TYNT+L   C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           ++  + +A E+  EM  RG  P+ V+++ L+   S+ G+L++A     EM ++GL     
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            Y  +ING+C+ G  +EA  + +EM+ +     + TYNT++ GLC+   +T     F++M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           L+    PD  +F +L++G+C+ G +++A  LFD +  + + P ++TYNTLI G C  G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           + A +L  +M  + + P+  +Y IL+NG   +G+V+ A   + EM+ KG+KP   + NT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I G  +  D S A     +M++ G  PD I+YN  ++   ++ N ++A  L+  M + GL
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           +PD +TY  I+ GF + G +  +  +   M+ KG+ P   TYT LI+ H ++  L  AF 
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 472 FHDEMLQRGFVPDDA 486
           +  +ML++  VP + 
Sbjct: 587 YFSKMLEKS-VPANV 600



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 6/239 (2%)

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI GH         L +FD M +  + PD+   N ++        + KA  ++  M   
Sbjct: 156 VLIAGHVX------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQF 209

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            I P  ++Y  +++ YC  G V +A  L  EM  +G  P  V+ N ++ G  + G+  +A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
              + +M++ G++  + +YN LINGF ++    +AF LV +M N+   P + TYN ++ G
Sbjct: 270 KGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            C+  ++    L    M++    PD  ++ +L+ G+     + EAF   DE+  R  VP
Sbjct: 330 LCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  310 bits (795), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 162/522 (31%), Positives = 284/522 (54%), Gaps = 35/522 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K H +  A   L EM+ + + P   TY+ LI+  C    L++A ++++ M   G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP VF Y +LI    ++ R + A E+L  M+  G+ PD   YN L++  CR + + EA+
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  +G+ P+  ++   I ++S++G++  A  YF++M S+G+VP+NV+YTI+I G+
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  +EAL     MLEKG + D+  Y+ I++ L +     EA  +F + L+ GV PD 
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + +LI G CK+G++ KA  L+D M    I P+IV YNTLI+G CK+GE+ KA +L+ +
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDE 721

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP----------------- 343
           +  + + P+ ++Y  +I+GYC  G++TEAF+L+ EM+ KGI P                 
Sbjct: 722 IEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 781

Query: 344 -----------------TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
                            +L + N++I  +C+ G   +A E    MV + + P+ ++Y  L
Sbjct: 782 LEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 841

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+ + + E M++A  L   ME + ++P+ +TY  +L  + + G       +   M  +G+
Sbjct: 842 IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGI 901

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF-VPDDAF 487
             D   Y  + + +  +    EA +  ++ L  G  + DD F
Sbjct: 902 ACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVF 943



 Score =  300 bits (769), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 165/519 (31%), Positives = 274/519 (52%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A CK   +   KM L EME K   P+  TYN  I   C+ G ++EA ++   M  KG
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG 306

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TY  L++G CK+ R   AK + + M   GL+P+  TY  L+    ++ N+ EA 
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM  RG+  ++V+++ +IG  ++ G++ +A+  F EM  AGL PD   Y ++I+GY
Sbjct: 367 RIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGY 426

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++  + +A ++  EM  +       TY+ +++GLC +  L +A+++ ++M+  GV P+ 
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC-------------- 286
           + + TLI  + ++     A+ L  IM    + PD+  YN LI G C              
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546

Query: 287 ---------------------KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                                K GE++ A + + DM+S  I PN + Y ILI G+C +G+
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             EA   +  M+ KG+ P + + + II    ++G   +A     K +  GV PD   YN+
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+GF +E +++KA  L  +M + G+ P+++ YN ++ G C+ G +  +  +   + EK 
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L PD  TY+T+I+G+    NL EAF+  DEM+ +G  PD
Sbjct: 727 LVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPD 765



 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 259/487 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  CK  +   AK+    M   G+ P+  TY  LI+ + +EG +EEA ++ + M  +G
Sbjct: 317 LVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG 376

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK  V TYN++I G+ K G   +A  + +EML  GL PDT TYN L+    +  +M++A 
Sbjct: 377 LKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKAC 436

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  R + P   ++S LI     +  L +A     +M   G+ P+  +Y  +I  Y
Sbjct: 437 ELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAY 496

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      A+++   M+  G + D+  YN ++ GLCRAK + EA  L  +M E+G+ P+ 
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNA 556

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+   I+ + K G +  A   F  M    I P+ V Y  LI G C VG   +A   +  
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKC 616

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+  +Y  +I+     G   EA  ++ + +  G+ P +   N++I G+C+ GD
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +   +M+  G++P+ + YNTLING  +   + KA  L  ++E + LVPDV+TY+ 
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYST 736

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+ G+C+ G + ++  +   MI KG++PD   Y  LI+G   + NL++A     E  Q+ 
Sbjct: 737 IIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 796

Query: 481 FVPDDAF 487
                AF
Sbjct: 797 VGSLSAF 803



 Score =  274 bits (700), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 154/483 (31%), Positives = 265/483 (54%), Gaps = 1/483 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  LC+  K++ AKM L +M +KG+ P+  TY   IN Y + G ++ A +    M   G
Sbjct: 527  LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            + P    Y  LI G C  G    A      ML+ GL PD   Y+ ++    +     EA 
Sbjct: 587  IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +F +  + GV PD+  +++LI  F + G +++A   + EM   G+ P+ V+Y  +ING 
Sbjct: 647  GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGL 706

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+ G V +A ++ DE+ EK  V DVVTY+TI++G C++  LTEA  LF+EM+ +G+ PD 
Sbjct: 707  CKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDG 766

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            Y +  LI G  K+GN+ KAL+LF    QKS+   +  +N+LID FCK G++ +A +L+ D
Sbjct: 767  YIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDD 825

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M+ +K++PN ++Y ILI+ Y     + EA +L+ +M  + I P  ++  +++  Y + G+
Sbjct: 826  MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              K       M + G+  D+I+Y  + + + +E    +A  L++K   +G+  +   ++ 
Sbjct: 886  RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 945

Query: 421  ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            ++   C++ ++     +L  M ++ L+    T  TL+ G     N  EA +    M + G
Sbjct: 946  LIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLG 1005

Query: 481  FVP 483
            +VP
Sbjct: 1006 WVP 1008



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 241/473 (50%), Gaps = 2/473 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           +++ +F+  + + G +P  +  N L+    +   +   +++  SM    + P V+TY ++
Sbjct: 190 EASSVFIASISE-GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNV 248

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I   CK G   + K VL EM +    P+  TYN  +   C+   + EA E+   M  +G+
Sbjct: 249 IKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGL 307

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            PD  +++ L+  F +  +   A + F  M S+GL P+   YT +I+G+ + G + EAL+
Sbjct: 308 GPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALR 367

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           ++DEM+ +G  ++VVTYN ++ G+ +A  + +A  LFNEML  G+ PD +T+  LI G+ 
Sbjct: 368 IKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYL 427

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K  +M KA  L   M  + + P   TY+ LI G C   +++KAN++   MI   + PN  
Sbjct: 428 KSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVF 487

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            YG LI  Y        A  L   M+  G+ P L   N +I G CR+    +A   L  M
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
             +G+ P++ +Y   IN + +   +  A      M + G+VP+ + Y +++ G C  G  
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++      M+EKGL PD   Y+ +I+        KEA     + L+ G VPD
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPD 660



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 214/408 (52%), Gaps = 1/408 (0%)

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           G  + A  V    +  G  P     N L+ +  +   M    +++  M    + PD+ ++
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTY 245

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + +I    + G + +  M   EM+     P+   Y   I G C+ G V EAL+++  M+E
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMME 304

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
           KG   D  TY  +++G C+ K   EA  +F  M   G+ P+ +T+T LI G  K+GN+ +
Sbjct: 305 KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEE 364

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           AL + D M  + +K ++VTYN +I G  K GEM KA  L+ +M+   + P+  +Y +LI+
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLID 424

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           GY     + +A  L  EM  + + P+  + + +I G C S D  KA+E L +M+  GV P
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +   Y TLI  +V+E   + A  L+  M   G++PD+  YN ++ G CR  ++ +++++L
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             M EKG+ P+  TY   IN +     ++ A R+  +ML  G VP++ 
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 189/368 (51%), Gaps = 38/368 (10%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           LD  +  +RE   + L     ++ I I+ +   GF+ EA  +    + +G    ++  N 
Sbjct: 157 LDSLVRCYREFGGSNLT----VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNN 212

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN--------------- 255
           ++  L +A M+     ++  M+E  + PD YT+T +I  HCK G+               
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC 272

Query: 256 -------------------MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
                              +++AL +  +M +K + PD  TY  L+DGFCK    ++A  
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           ++  M S  ++PN  +Y  LI+G+   G++ EA R+  EM+ +G+K  +V+ N +I G  
Sbjct: 333 IFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           ++G+ +KA    ++M+  G++PD+ +YN LI+G+++  +M KA  L+++M+ + L P   
Sbjct: 393 KAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY+V+++G C    +  +  +L +MI  G+ P+   Y TLI  +V ++  + A      M
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512

Query: 477 LQRGFVPD 484
           +  G +PD
Sbjct: 513 IANGVLPD 520



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 87/174 (50%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++A  K   ++ A+    +ME + + P+T+TY +L+ +Y + G   +   L   M  +G
Sbjct: 841  LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +      Y  + +  CK+G+   A ++L++ L  G+  +   ++ L+   C+++ +S   
Sbjct: 901  IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 960

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            E+  EM +  ++    + +TL+  F ++G  D A      M+  G VP ++  T
Sbjct: 961  ELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 1014


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  310 bits (795), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 164/489 (33%), Positives = 277/489 (56%), Gaps = 10/489 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQ-KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +VN LCK      A   L EM   K V PD VTY+T+IN +C++G ++ A +++  M  +
Sbjct: 15  VVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTR 74

Query: 60  -GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G+ P V TY S+++GLC+ G+ DRA E++ EM   G+ PD  T++ L+   C    + E
Sbjct: 75  DGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDE 134

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK---SAGLVPDNVLYTI 175
           A +++ E+       D VS S LI    R  ++  A   F+EM+        PD V YT 
Sbjct: 135 ALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTA 194

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I+G+C++G + +A+KM   M  + CV +VVTY+++L+GLC+A  L +A DLF  M  +G
Sbjct: 195 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 254

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  T+TTLIHG C    ++ A  L D MT      D V+YN L+DG+C++G +E+A 
Sbjct: 255 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAK 314

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM-VGKGIKPTLVSCNTIIKG 354
           +L+ +M ++   P+ I+Y  L+ G+C+   + EA  L   M    GI P +V+ + ++ G
Sbjct: 315 QLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAG 374

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           Y R+    +A EF+ +M++  V P++++Y++LI+G  +   ++ A  ++  ++     PD
Sbjct: 375 YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PD 430

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V+TY +++ G C   R  ++  +L  M+ K + P   T+ ++I       ++ EA++   
Sbjct: 431 VVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 490

Query: 475 EMLQRGFVP 483
            M   G  P
Sbjct: 491 AMAAHGLEP 499



 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 151/430 (35%), Positives = 244/430 (56%), Gaps = 10/430 (2%)

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           + P   TYN ++NGLCK     +A EVL EM     ++PD  TY+T++   C++  M  A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 120 EEIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
            EI  EM +R G+APD+V++++++    R+G++DRA    REMK  G+ PD   ++ +I 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN--EMLERGV 236
           G+C    V EALK+  E+L   C +D V+ + ++ GLCR + + EA +LF   EM E G 
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 237 F-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + PD  T+T LI G CK GN+ KA+ +  +M  +   P++VTY++L+ G CK G++++A 
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            L+  M S+   PN ++Y  LI+G C+   V  A  L  EM         VS N ++ GY
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN-QGLVPD 414
           CR G   +A +   +M ++   PD I+Y  L+ GF     +++A  L+  M+   G+ PD
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V+TY++++ G+ R  R  ++   +  MI + + P+  TY++LI+G      +  A     
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM---- 420

Query: 475 EMLQRGFVPD 484
           E+L+    PD
Sbjct: 421 EVLKNVDKPD 430



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 255/524 (48%), Gaps = 44/524 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LC+D K+D A   + EM+ KGV PD  T++ LI  +C    ++EA +L   +    
Sbjct: 87  VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM---GLSPDTATYNTLLVESCRKENMS 117
            +    + ++LI GLC++ R   A E+  EM         PD  TY  L+   C+  N+ 
Sbjct: 147 CRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLE 206

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A ++   M  R   P++V++S+L+    + G LD+AL  FR M S G VP+ V YT +I
Sbjct: 207 KAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLI 266

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G C    V  A  + DEM    C  D V+YN +L+G CR   + EA  LF EM  +   
Sbjct: 267 HGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCL 326

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
           PD  T+T L+ G C    + +A  L + M T   I PD+VTY+ ++ G+ +     +A +
Sbjct: 327 PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAE 386

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVT----------------------------- 327
              +MI+R ++PN ++Y  LI+G C  G V                              
Sbjct: 387 FIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDR 446

Query: 328 --EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             EA  L  EMV K ++P++ + N++I   CR GD  +A + L  M + G++P  ++Y T
Sbjct: 447 TEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 506

Query: 386 LINGFVREENMDKAFALVSKMENQG--------LVPDVITYNVILTGFCRQGRMHDSELI 437
           L+ GF R   M+ A+ L   M  +         LVP+   ++ ++ G C+   +  +  +
Sbjct: 507 LLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAV 565

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +  +  +   P       +++G +     +EA +  + + + G 
Sbjct: 566 VEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 2/113 (1%)

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMEN-QGLVPDVITYNVILTGFCRQGRMH 432
           E V P+  +YN ++NG  +     KA+ ++ +M + + + PD++TY+ ++ GFC+QG M 
Sbjct: 3   EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD 62

Query: 433 DSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  IL  M+ + G+ PD  TYT++++G      +  A     EM  +G  PD
Sbjct: 63  RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPD 115


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  310 bits (795), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 157/485 (32%), Positives = 271/485 (55%), Gaps = 4/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LC   K+  A++ +  +   G  PDT TY +LI  +C+ G L+ AF++ + M   G
Sbjct: 208 MIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDG 267

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY++LINGLC +GR + A ++L+EM+  G+ P    Y   +V  C      EA 
Sbjct: 268 CDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAV 327

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M +RG  P++ +++ LI   SR+G+ + A+  + +M + GLVP  V Y+ +IN  
Sbjct: 328 KLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQL 387

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G    AL + + ML    + +  TYN I+ G C    + +A  +F++ML+ G  P+ 
Sbjct: 388 YVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNV 447

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +IH + K G MN A+ L ++M    +K D  TY  LI GF + G++E A  L+ +
Sbjct: 448 ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNE 507

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   ISPN ++Y  +INGY ++  V +A  L+++MV  G  P+  + N +I G+ ++  
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A+ F  KMV +G+ P+ I+Y + I+G  +      AF +  +M+ +   P++ TY+ 
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSS 627

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G+  D+E    R+++ G  P+  TYTTL+ G   +    EA +  + M ++G
Sbjct: 628 LIDGLCQEGQAEDAE----RLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG 683

Query: 481 FVPDD 485
             P +
Sbjct: 684 LQPSE 688



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 142/429 (33%), Positives = 233/429 (54%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M   G++P +FT+N++I  LC KG+   A+ ++  +   G  PDT TY +L++  C+  N
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +  A E+F  M + G  P+ V++S LI      G+L+ A+    EM   G+ P    YTI
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
            I   C  G   EA+K+  +M ++GC  +V TY  +++GL R      A  ++++ML  G
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADG 372

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P   T++ LI+    +G    AL +F+ M      P+  TYN +I GFC +G ++KA 
Sbjct: 373 LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT 432

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            ++  M+    SPN I+Y I+I+ Y   G++  A RL   M G G+K    +   +I G+
Sbjct: 433 AIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGF 492

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            R G    A    ++MV  G+ P+ ++YN +ING++    +D A AL  KM   G VP  
Sbjct: 493 SRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSS 552

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            TYN++++GF +  R+ ++E    +M+++GL P+  TYT+ I+G         AF+   E
Sbjct: 553 GTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHE 612

Query: 476 MLQRGFVPD 484
           M +R + P+
Sbjct: 613 MKKRDYFPN 621



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/456 (32%), Positives = 230/456 (50%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM   G+ P+  T+N +I   C +G ++EA  +M  +   G  P  FTY SLI G CK G
Sbjct: 192 EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNG 251

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D A E+ D M++ G  P++ TY+ L+   C +  + EA ++  EM  +G+ P + +++
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYT 311

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
             I      G+   A+    +MK  G  P+   YT +I+G  R+G    A+ +  +ML  
Sbjct: 312 IPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD 371

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G V   VTY+ ++N L        A  +F  ML     P+  T+  +I G C  G + KA
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKA 431

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +FD M +    P+++TYN +I  + K G M  A +L   M    +  +  +Y  LI+G
Sbjct: 432 TAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISG 491

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +   G +  AF L+ EMV  GI P +V+ N II GY        A     KMV  G  P 
Sbjct: 492 FSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPS 551

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           S +YN +I+GF +   + +A     KM  QGL+P+VITY   + G C+ GR   +  I  
Sbjct: 552 SGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFH 611

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            M ++   P+  TY++LI+G   +   ++A R  D+
Sbjct: 612 EMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD 647



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 237/446 (53%), Gaps = 2/446 (0%)

Query: 41  CR-EGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSP 98
           CR EG ++   Q+++ ++        ++++++L+  L K       ++V  EML  G+ P
Sbjct: 141 CRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRP 200

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
           +  T+N ++   C K  + EAE I   +   G  PD  ++++LI    +NG LD A   F
Sbjct: 201 NLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMF 260

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
             M   G  P++V Y+ +ING C  G + EA+ M +EM++KG    V  Y   +  LC A
Sbjct: 261 DRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDA 320

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
               EA  L  +M +RG  P+  T+T LI G  +DG    A+ ++  M    + P  VTY
Sbjct: 321 GRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTY 380

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           + LI+     G  E A  ++  M+S    PN  +Y ++I G+CS+G++ +A  ++ +M+ 
Sbjct: 381 SALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLK 440

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G  P +++ N II  Y + G  + A   L  M   G+  D+ +Y  LI+GF R   ++ 
Sbjct: 441 AGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEH 500

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           AF+L ++M   G+ P+V+TYN I+ G+    ++ D+  + W+M+E G  P   TY  +I+
Sbjct: 501 AFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMIS 560

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G    N + EA  F  +M+++G +P+
Sbjct: 561 GFSKTNRISEAENFCGKMVKQGLLPN 586



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 231/456 (50%), Gaps = 4/456 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LC   +   A   L +M+++G  P+  TY  LI+   R+G  E A  + + M   GL P
Sbjct: 316 SLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
              TY++LIN L  +GR + A  + + ML     P+T TYN ++   C    + +A  IF
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF 435

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M + G +P++++++ +I I+ + G ++ A+     MK  GL  D   Y  +I+G+ R 
Sbjct: 436 DQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G +  A  + +EM+E G   +VVTYN I+NG      + +A  LF +M+E G  P   T+
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             +I G  K   +++A N    M ++ + P+++TY + IDG CK G    A K++ +M  
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R   PN  +Y  LI+G C  G   +A RL    +  G +P + +  T+++G C  G   +
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDAERL----LDDGCEPNVDTYTTLVRGLCGKGRCYE 671

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           AD+ +  M  +G+ P    Y  L+ G  +   ++ A  +   M   G  P +  Y  ++ 
Sbjct: 672 ADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALIC 731

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             C+      ++ +   M++K  N D   +T L++G
Sbjct: 732 ALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDG 767



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 220/443 (49%), Gaps = 5/443 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +D K + A     +M   G+ P  VTY+ LIN    EG  E A  +   M    
Sbjct: 348 LISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHD 407

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN +I G C  G   +A  + D+ML+ G SP+  TYN ++    ++  M+ A 
Sbjct: 408 SLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAM 467

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+  D  +++ LI  FSR G+L+ A   F EM   G+ P+ V Y  IINGY
Sbjct: 468 RLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGY 527

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                V +AL +  +M+E G V    TYN +++G  +   ++EA++   +M+++G+ P+ 
Sbjct: 528 LTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNV 587

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+ I G CK+G  + A  +F  M ++   P++ TY++LIDG C+ G+ E A +L  D
Sbjct: 588 ITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD 647

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
                  PN  +Y  L+ G C  G   EA +L   M  KG++P+      ++ G C++ +
Sbjct: 648 ----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLE 703

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +    MV+ G  P    Y  LI    +     KA  +   M  +    D + + V
Sbjct: 704 VESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTV 763

Query: 421 ILTGFCRQGRMHDSELILWRMIE 443
           +L G  ++G   D  L L  ++E
Sbjct: 764 LLDGLLKEGET-DLSLELLHVME 785



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 211/409 (51%), Gaps = 4/409 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L  + + ++A      M      P+T TYN +I  +C  G++++A  + + M   G
Sbjct: 383 LINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAG 442

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN +I+   K+G  + A  +L+ M   GL  DT TY  L+    R   +  A 
Sbjct: 443 PSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAF 502

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM   G++P++V+++ +I  +    ++D AL  F +M  +G VP +  Y ++I+G+
Sbjct: 503 SLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGF 562

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + EA     +M+++G + +V+TY + ++GLC+    + A  +F+EM +R  FP+ 
Sbjct: 563 SKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNL 622

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LI G C++G    A  L D       +P++ TY TL+ G C  G   +A++L   
Sbjct: 623 CTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVES 678

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+   Y  L+ G C    V  A +++  MV  G +P L     +I   C++  
Sbjct: 679 MKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANF 738

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
             KA      M+ +  + D + +  L++G ++E   D +  L+  ME++
Sbjct: 739 RQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 166/353 (47%), Gaps = 39/353 (11%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K   +++A   L  M+  G+  DT TY  LI+ + R G LE AF L N M   G+ P V 
Sbjct: 459 KQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVV 518

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TYN++ING     + D A  +  +M++ G  P + TYN ++    +   +SEAE    +M
Sbjct: 519 TYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKM 578

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            ++G+ P+++++++ I    +NG+   A   F EMK     P+   Y+ +I+G C+ G  
Sbjct: 579 VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQA 638

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A    + +L+ GC  +V TY T++ GLC      EAD L   M ++G+ P    +  L
Sbjct: 639 EDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRAL 694

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKP--------------------------------- 273
           + G CK+  +  AL +FD M     +P                                 
Sbjct: 695 LVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHW 754

Query: 274 --DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
             D V +  L+DG  K GE + + +L   M SR  + N+ +  +L     ++G
Sbjct: 755 NSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALG 807



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 131/270 (48%), Gaps = 4/270 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N      K+D A     +M + G  P + TYN +I+ + +   + EA      M  +G
Sbjct: 523 IINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQG 582

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY S I+GLCK GR   A ++  EM +    P+  TY++L+   C++    +AE
Sbjct: 583 LLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAE 642

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +    G  P++ +++TL+      G+   A      MK  GL P   +Y  ++ G 
Sbjct: 643 RLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQ 698

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+N  V  ALK+ D M+  G    +  Y  ++  LC+A    +A  +F  ML++    D 
Sbjct: 699 CKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDE 758

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
             +T L+ G  K+G  + +L L  +M  ++
Sbjct: 759 VVWTVLLDGLLKEGETDLSLELLHVMESRN 788



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 138/282 (48%), Gaps = 18/282 (6%)

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK-DGNMNKALN- 261
           D+  + ++LN L R ++   AD++   M++                 C+ +G + + +  
Sbjct: 110 DMSCFVSMLNRLVRDRLFVPADNVRILMIKS----------------CRNEGEVKRVIQV 153

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L +I T       + +++TL+    K         ++ +M++  I PN  ++  +I   C
Sbjct: 154 LSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILC 213

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
           + G V EA  +   +   G  P   +  ++I G+C++G+   A E   +MV +G DP+S+
Sbjct: 214 NKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSV 273

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y+ LING   E  +++A  ++ +M ++G+ P V  Y + +   C  GR  ++  +L +M
Sbjct: 274 TYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKM 333

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            ++G  P+  TYT LI+G       + A   + +ML  G VP
Sbjct: 334 KKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ LCK+ +   A     EM+++  +P+  TY++LI+  C+EG  E+A +L++     G 
Sbjct: 594 IDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GC 649

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P V TY +L+ GLC KGRC  A ++++ M + GL P    Y  LLV  C+   +  A +
Sbjct: 650 EPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALK 709

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           IF  M   G  P +  +  LI    +     +A   F+ M       D V++T++++G  
Sbjct: 710 IFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLL 769

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVT 207
           + G    +L++   M  + C ++  T
Sbjct: 770 KEGETDLSLELLHVMESRNCTLNFQT 795


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  310 bits (794), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 172/484 (35%), Positives = 269/484 (55%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K+  A++ L ++ Q  + PD  TY +LI  +CR   L+ AF + + M  +G
Sbjct: 204 LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY++LINGLC +GR D A ++L+EM++ G+ P   TY   +   C  E+  EA 
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M +RG  P++ +++ LI   SR G+L+ A+  + +M   GLVP+ V Y  +IN  
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G    ALK+   M   G + +  TYN I+ GLC    + +A  LF +ML+ G  P  
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI+G+   GN+N A  L D+M +   +PD  TYN L+ GF K G++E A+  + +
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   ++PN +SY  LI+G+   G V  A  L   M   G  P + S N +I G  +   
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A++   KMV +G+ P+ I+Y TLI+G  R      AF +   ME +  +P++ TY+ 
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G+  ++E    RM E G  P   TY+TL++G   +    EA +   +M +RG
Sbjct: 624 LIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 679

Query: 481 FVPD 484
           F PD
Sbjct: 680 FCPD 683



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 256/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ A   + +I     FL E+   G      + NTL+    +   +E A  L   M   G
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + T+N+LIN L KKG+   A+ +L ++ Q  LSPD  TY +L++  CR  N+  A 
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M + G  P+ V++STLI      G++D AL    EM   G+ P    YT+ I   
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 313

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      EA+++   M ++GC  +V TY  +++GL R   L  A  L+++ML+ G+ P+ 
Sbjct: 314 CAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNT 373

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+  C  G  + AL +F  M       +  TYN +I G C  G++EKA  L+  
Sbjct: 374 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEK 433

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     P  ++Y  LINGY + G+V  A RL   M   G +P   + N ++ G+ + G 
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGK 493

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A  +  +MV  G++P+ +SY  LI+G  ++  +D A +L+ +ME  G  P+V +YN 
Sbjct: 494 LESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNA 553

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  ++ R  ++E I  +M+E+GL P+  TYTTLI+G       + AF+   +M +R 
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613

Query: 481 FVPD 484
            +P+
Sbjct: 614 CLPN 617



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 255/519 (49%), Gaps = 39/519 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + ++D A   L EM +KG+ P   TY   I A C     EEA +L+  M  +G
Sbjct: 274 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 333

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LI+GL + G+ + A  +  +ML+ GL P+T TYN L+ E C     S A 
Sbjct: 334 CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 393

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M   G   +  +++ +I      G +++A++ F +M   G +P  V Y  +INGY
Sbjct: 394 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V  A ++ D M E GC  D  TYN +++G  +   L  A   F EM+E G+ P+ 
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513

Query: 241 YTFTTLIHGHCKDGNMNKALNLF-----------------------------------DI 265
            ++T LI GH KDG ++ AL+L                                    D 
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++ + P+++TY TLIDG C+ G  + A K++ DM  RK  PN  +Y  LI G C  G 
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             EA R    M   G +PTL + +T++ G CR G   +A++ +  M   G  PD   Y +
Sbjct: 634 ADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 689

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+    +   +D A  +   +E +G    +  Y  ++   C+ G++ +++ +   M+EK 
Sbjct: 690 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 749

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            N D   +T L++G + +  L    +    M  + F P+
Sbjct: 750 WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPN 788



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 236/466 (50%), Gaps = 31/466 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +  K++ A     +M ++G+ P+TVTYN LIN  C  G    A ++ + M G G
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 TYN +I GLC  G  ++A  + ++ML+MG  P   TYNTL+     K N++ A 
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 463

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G  PD  +++ L+  FS+ G+L+ A  YF+EM   GL P+ V YT +I+G+
Sbjct: 464 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH 523

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G V  AL +   M E GC  +V +YN ++NGL +    +EA+ + ++M+E+G+ P+ 
Sbjct: 524 SKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNV 583

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN--------------------- 279
            T+TTLI G C++G    A  +F  M ++   P++ TY+                     
Sbjct: 584 ITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEI 643

Query: 280 ----------TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
                     TL+ G C+ G   +A +L  DM  R   P+   Y  L+  +C    V  A
Sbjct: 644 GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHA 703

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            ++++ +  KG +  L     +I   C++G   +A      M+ +  + D I +  L++G
Sbjct: 704 LKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDG 763

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
            ++E  +D    L+  ME++   P++ TY ++     R G+  +SE
Sbjct: 764 LLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESE 809



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 194/371 (52%), Gaps = 4/371 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N       +++A   L  M++ G  PD  TYN L++ + + G LE A      M   G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   +Y +LI+G  K G+ D A  +L  M +MG +P+  +YN ++    ++   SEAE
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  +M  +G+ P++++++TLI    RNG+   A   F +M+    +P+   Y+ +I G 
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   EA    + M E GC   + TY+T+++GLCR     EA+ L  +M ERG  PD 
Sbjct: 629 CQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 684

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + +L+  HCK+  ++ AL +F  +  K  +  +  Y  LI   CK G++E+A  L+ +
Sbjct: 685 EIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDN 744

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ ++ + + I + +L++G    G +    +L + M  K   P + +   + +   R G 
Sbjct: 745 MLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 804

Query: 361 ASKADEFLSKM 371
           + +++    K+
Sbjct: 805 SIESEPLADKL 815



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 162/297 (54%)

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A  +  +ML  G    ++T+NT++N L +   + EA+ + +++ +  + PD +T+T+LI 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           GHC++ N++ A  +FD M ++   P+ VTY+TLI+G C  G +++A  +  +MI + I P
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
              +Y + I   C++ H  EA  L   M  +G +P + +   +I G  R G    A    
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 361

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            KM+ EG+ P++++YN LIN          A  +   ME  G + +  TYN I+ G C  
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G +  + ++  +M++ G  P   TY TLING++++ N+  A R  D M + G  PD+
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  310 bits (794), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 154/458 (33%), Positives = 270/458 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+ + +  A   L +M + G+ PD +T+NTLIN  C EG ++EA  L N M  +G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V +Y+++INGLCK G    A ++L +M + G  P+   Y T++   C+   +++A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  RG+ PD+V++ST++  F   G L+ A + F EM    ++P+ V +TI+++G 
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  + + M +KG   +  TYN +++G C    + EA  + + M+++G  P  
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  LI+G+CK   +++A +L   M++K + PD VTY+TL+ G C+VG  ++A  L+ +
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  + P+ ++Y  L++G C  GH+ EA +L   M    I+P +V  N +I+G   +G 
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E  SK+ ++G+ P   +Y  +I G ++E   D+A+ L  KME+ G +P+  +YNV
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNV 552

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           I+ GF +      +  ++  M+ K  + D ST+  L++
Sbjct: 553 IIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score =  308 bits (788), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 162/474 (34%), Positives = 265/474 (55%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID A      M +    P  V +   + +  ++        L N M   G+   V++ N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LIN LC+      A  VL +M ++G+ PD  T+NTL+   C +  + EA  +F EM RRG
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             PD++S+ST+I    ++G    AL   R+M+  G  P+ V YT II+  C++  V +A+
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM+++G   DVVTY+TIL+G C    L EA  LFNEM+ R V P+  TFT L+ G 
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+G +++A  +F+ MT+K  +P+  TYN L+DG+C   +M++A K+   M+ +  +P  
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            SY ILINGYC    + EA  L  EM  K + P  V+ +T+++G C+ G   +A     +
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M S G+ PD ++Y+TL++G  +  ++D+A  L+  M+   + PD++ YN+++ G    G+
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  ++ +  ++   G+ P   TYT +I G + +    EA+    +M   GF+P+
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPN 546



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 133/394 (33%), Positives = 221/394 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK      A   L +ME+KG  P+ V Y T+I++ C++  + +A  L++ M  +G
Sbjct: 203 VINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRG 262

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY+++++G C  G  + A  + +EM+   + P+T T+  L+   C++  +SEA 
Sbjct: 263 IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEAR 322

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+++G  P+  +++ L+  +  N Q+D A      M   G  P    Y I+INGY
Sbjct: 323 CVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGY 382

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA  +  EM EK    D VTY+T++ GLC+     EA +LF EM   G+ PD 
Sbjct: 383 CKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDL 442

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TL+ G CK G++++AL L   M +  I+PDIV YN LI+G    G++E A +L++ 
Sbjct: 443 MTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSK 502

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +  I P   +Y I+I G    G   EA+ L+ +M   G  P   S N II+G+ ++ D
Sbjct: 503 LFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQD 562

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           +S A   + +MV +    DS ++  L++   R+E
Sbjct: 563 SSTAIRLIDEMVGKRFSADSSTFQMLLDLESRDE 596



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 206/370 (55%)

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           ++ +A   F  M R    P +V F   +G  ++  Q    +    +M   G+  +     
Sbjct: 72  SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+IN  CR   V+ A+ +  +M + G   D +T+NT++NG C    + EA  LFNEM+ R
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  PD  +++T+I+G CK GN + AL L   M +K  KP++V Y T+ID  CK   +  A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L ++M+ R I P+ ++Y  +++G+CS+GH+ EA  L+ EMVG+ + P  V+   ++ G
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+ G  S+A      M  +G +P++ +YN L++G+     MD+A  ++  M ++G  P 
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V +YN+++ G+C++ R+ +++ +L  M EK L PD  TY+TL+ G       +EA     
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431

Query: 475 EMLQRGFVPD 484
           EM   G +PD
Sbjct: 432 EMCSSGLLPD 441



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 52/108 (48%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K++ AK    ++   G+ P   TY  +I    +EG  +EA++L   M   G  P   +YN
Sbjct: 492 KLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYN 551

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            +I G  +      A  ++DEM+    S D++T+  LL    R E +S
Sbjct: 552 VIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRDEIIS 599


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  310 bits (794), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 159/480 (33%), Positives = 266/480 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+  L  M  KGV  D VTY+T+I+  C+   ++ A  ++  M  KG
Sbjct: 205 IIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKG 264

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V TYN++I+GLCK    DRA+ VL  M+  G+ PD  TYNT++   C+ + +  A+
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  + V PDI +++ LI  +   G+    +    EM + GL PD V Y+++++  
Sbjct: 325 GVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYL 384

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG   EA K+   M+ KG   +V  Y  +L+G      + +  DL + M+  G+ P+ 
Sbjct: 385 CKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNN 444

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y F  ++  + K   +++A+++F  M+Q  + PD+VTY  LID  CK+G ++ A   +  
Sbjct: 445 YIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQ 504

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI+  ++PN + +  L+ G C++    +A  L++EM  +G++P +V  NTI+   C  G 
Sbjct: 505 MINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ 564

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   +  M   GV P+ ISYNTLI G       D+A  L+  M + GL PD+I+Y+ 
Sbjct: 565 VMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDT 624

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G+C+ GR+ ++  +   M+ KG+ P   TY+T++ G        EA   +  M++ G
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSG 684



 Score =  285 bits (728), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 149/466 (31%), Positives = 253/466 (54%), Gaps = 4/466 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V PD  TY+ L   +CR G +E  F     +   G +      N L+NGLC   R D A 
Sbjct: 86  VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145

Query: 86  EVL-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG---VAPDIVSFSTL 141
           ++L   M + G  P+  + NTLL   C ++ + EA E+   M+  G     P++V+++T+
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I    +   +DRA    + M   G+  D V Y+ II+G C+   V  A  +   M++KG 
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV 265

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             DVVTYNTI++GLC+A+ +  A+ +   M+++GV PD  T+ T+I G CK   +++A  
Sbjct: 266 KPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADG 325

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +   M  K +KPDI TYN LI G+   GE ++  +   +M +R + P+ ++Y +L++  C
Sbjct: 326 VLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLC 385

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G  TEA +++Y M+ KGIKP +     ++ GY   G  +   + L  MV+ G+ P++ 
Sbjct: 386 KNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNY 445

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            +N ++  + ++  +D+A  + S+M   GL PDV+TY +++   C+ GR+ D+ L   +M
Sbjct: 446 IFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQM 505

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           I  G+ P+   + +L+ G  + +  ++A     EM  +G  P+  F
Sbjct: 506 INDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVF 551



 Score =  280 bits (717), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 251/484 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+  L  M  KGV PD VTYNT+I+  C+   ++ A  ++  M  K 
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD 334

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP + TYN LI+G    G        L+EM   GL PD  TY+ LL   C+    +EA 
Sbjct: 335 VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEAR 394

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M R+G+ P++  +  L+  ++  G +         M + G+ P+N ++ I++  Y
Sbjct: 395 KIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAY 454

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + EA+ +   M + G   DVVTY  +++ LC+   + +A   FN+M+  GV P+ 
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNS 514

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F +L++G C      KA  LF  M  + ++P++V +NT++   C  G++  A +L   
Sbjct: 515 VVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDS 574

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + PN ISY  LI G+C  G   EA +L   MV  G+KP L+S +T+++GYC++G 
Sbjct: 575 MERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGR 634

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M+ +GV P +++Y+T++ G        +A  L   M   G   D+ TYN+
Sbjct: 635 IDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNI 694

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL G C+   + ++  I   +  K L P+  T+T +I+        K+A      +   G
Sbjct: 695 ILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG 754

Query: 481 FVPD 484
            VP+
Sbjct: 755 LVPN 758



 Score =  278 bits (710), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 166/554 (29%), Positives = 273/554 (49%), Gaps = 70/554 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+  L  M  KGV PD VTYNT+I+  C+   ++ A  ++  M  KG
Sbjct: 240 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKG 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRA--------------------------------KEV- 87
           +KP V TYN++I+GLCK    DRA                                KEV 
Sbjct: 300 VKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVV 359

Query: 88  --LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI--- 142
             L+EM   GL PD  TY+ LL   C+    +EA +IF  M R+G+ P++  +  L+   
Sbjct: 360 RRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGY 419

Query: 143 -------------------GI-------------FSRNGQLDRALMYFREMKSAGLVPDN 170
                              GI             +++   +D A+  F  M   GL PD 
Sbjct: 420 AARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDV 479

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           V Y I+I+  C+ G V +A+   ++M+  G   + V +N+++ GLC      +A++LF E
Sbjct: 480 VTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFE 539

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           M ++GV P+   F T++   C +G +  A  L D M +  ++P++++YNTLI G C  G 
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGR 599

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
            ++A +L   M+S  + P+ ISY  L+ GYC  G +  A+ L+ EM+ KG+ P  V+ +T
Sbjct: 600 TDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYST 659

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           I++G   +   S+A E    M+  G   D  +YN ++NG  +   +D+AF +   + ++ 
Sbjct: 660 ILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKD 719

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           L P++IT+ +++    + GR  D+  +   +   GL P+  TY  ++   + +  L E  
Sbjct: 720 LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFD 779

Query: 471 RFHDEMLQRGFVPD 484
                M + G  PD
Sbjct: 780 NLFLAMEKSGCTPD 793



 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 260/516 (50%), Gaps = 35/516 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A   L  M  K V PD  TYN LI+ Y   G  +E  + +  M  +G
Sbjct: 310 IIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG 369

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEV--------------------------------- 87
           L P V TY+ L++ LCK G+C  A+++                                 
Sbjct: 370 LDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLT 429

Query: 88  --LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
             LD M+  G+SP+   +N +L    +K  + EA  IF  MS+ G++PD+V++  LI   
Sbjct: 430 DLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G++D A++ F +M + G+ P++V++  ++ G C      +A ++  EM ++G   +V
Sbjct: 490 CKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNV 549

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V +NTI+  LC    +  A  L + M   GV P+  ++ TLI GHC  G  ++A  L D+
Sbjct: 550 VFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDV 609

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    +KPD+++Y+TL+ G+CK G ++ A  L+ +M+ + ++P  ++Y  ++ G      
Sbjct: 610 MVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRR 669

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
            +EA  L+  M+  G +  + + N I+ G C++    +A +    + S+ + P+ I++  
Sbjct: 670 FSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+   +      A  L + + + GLVP+V+TY +++    ++G + + + +   M + G
Sbjct: 730 MIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
             PD      +I   + +  +  A  +  ++ +  F
Sbjct: 790 CTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNF 825



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 209/402 (51%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           A  K   ID A      M Q G+ PD VTY  LI+A C+ G +++A    N M   G+ P
Sbjct: 453 AYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTP 512

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
               +NSL+ GLC   R ++A+E+  EM   G+ P+   +NT++   C +  +  A+ + 
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLI 572

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
             M R GV P+++S++TLIG     G+ D A      M S GL PD + Y  ++ GYC+ 
Sbjct: 573 DSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKT 632

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G +  A  +  EML KG     VTY+TIL GL   +  +EA +L+  M++ G   D YT+
Sbjct: 633 GRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTY 692

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             +++G CK   +++A  +F  +  K ++P+I+T+  +ID   K G  + A  L+A + S
Sbjct: 693 NIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPS 752

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             + PN ++Y I++      G + E   L+  M   G  P  V  N II+     G+  +
Sbjct: 753 HGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMR 812

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           A  +LSK+       ++ + + LI+ F REE  + A +L  K
Sbjct: 813 AGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSLPEK 854



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 231/459 (50%), Gaps = 2/459 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++ LCK+ K   A K+F C M +KG+ P+   Y  L++ Y   G + +   L++ M   
Sbjct: 380 LLDYLCKNGKCTEARKIFYC-MIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P  + +N ++    KK   D A  +   M Q GLSPD  TY  L+   C+   + +A
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
              F +M   GV P+ V F++L+       + ++A   F EM   G+ P+ V +  I+  
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C  G V+ A ++ D M   G   +V++YNT++ G C A    EA  L + M+  G+ PD
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++ TL+ G+CK G ++ A  LF  M +K + P  VTY+T++ G        +A +L+ 
Sbjct: 619 LISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYL 678

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +MI      +  +Y I++NG C    V EAF+++  +  K ++P +++   +I    + G
Sbjct: 679 NMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGG 738

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A +  + + S G+ P+ ++Y  ++   ++E  +D+   L   ME  G  PD +  N
Sbjct: 739 RKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLN 798

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
            I+     +G +  +   L ++ E   + + ST + LI+
Sbjct: 799 AIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLIS 837



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 217/408 (53%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   G+ P+   +N ++ AY ++  ++EA  + + MS  GL P V TY  LI+ LCK GR
Sbjct: 435 MVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGR 494

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A    ++M+  G++P++  +N+L+   C  +   +AEE+F EM  +GV P++V F+T
Sbjct: 495 VDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNT 554

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++      GQ+  A      M+  G+ P+ + Y  +I G+C  G   EA ++ D M+  G
Sbjct: 555 IMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVG 614

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D+++Y+T+L G C+   +  A  LF EML +GV P   T++T++ G       ++A 
Sbjct: 615 LKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAK 674

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L+  M +   + DI TYN +++G CK   +++A K++  + S+ + PN I++ I+I+  
Sbjct: 675 ELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVL 734

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G   +A  L+  +   G+ P +V+   ++K   + G   + D     M   G  PDS
Sbjct: 735 FKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDS 794

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           +  N +I   +    + +A A +SK++      +  T +++++ F R+
Sbjct: 795 VMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSRE 842



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 169/342 (49%), Gaps = 45/342 (13%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD---DLFNEMLE---RGVFPDFY 241
           +ALK+ DE+L       V  +N +LN + RA+  + ++    LFN M       V PD  
Sbjct: 32  DALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLC 91

Query: 242 TFTTLIHGHCKDGN----------------------MNKALN--------------LFDI 265
           T++ L    C+ G                       +N+ LN              L   
Sbjct: 92  TYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRR 151

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR---KISPNYISYGILINGYCS 322
           M +    P++V+ NTL+ G C    +E+A +L   M        +PN ++Y  +I+G C 
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
              V  A  +   M+ KG+K  +V+ +TII G C++    +A+  L  M+ +GV PD ++
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 271

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNT+I+G  + + +D+A  ++  M ++G+ PDV+TYN I+ G C+   +  ++ +L  MI
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +K + PD  TY  LI+G++S    KE  R  +EM  RG  PD
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPD 373



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 45/274 (16%)

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV---GEMEKANKLW---ADMISRKISPN 309
           ++ AL LFD +   +    +  +N L++   +       E A  L+   A   S K+ P+
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 310 YISYGILINGYCSMGHVTEAFR------------------------------------LW 333
             +Y IL   +C +G +   F                                     L 
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG---VDPDSISYNTLINGF 390
             M   G  P +VSCNT++KG C      +A E L  M  +G     P+ ++YNT+I+G 
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            + + +D+A  ++  M ++G+  DV+TY+ I+ G C+   +  +E +L  MI+KG+ PD 
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TY T+I+G      +  A      M+ +G  PD
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 303



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 86/185 (46%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    +   AK     M + G   D  TYN ++N  C+   ++EAF++  S+  K 
Sbjct: 660 ILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKD 719

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P + T+  +I+ L K GR   A ++   +   GL P+  TY  ++    ++  + E +
Sbjct: 720 LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFD 779

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M + G  PD V  + +I      G++ RA  Y  ++       +    +++I+ +
Sbjct: 780 NLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLF 839

Query: 181 CRNGF 185
            R  +
Sbjct: 840 SREEY 844


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  310 bits (793), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 171/524 (32%), Positives = 278/524 (53%), Gaps = 39/524 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C+   +  A+  L  M++ G+ P   TYNTL++A+ R G++++A +++ SM+  G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKEN-MSE 118
            +P + TYN L  GLC+ G+ D A  + DEM ++  + PD  TYNTL V++C K    S+
Sbjct: 309 FEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTL-VDACFKWRCSSD 367

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  EM  +GV P +V+ + ++    + G+L+ AL    ++   GL PD + Y  +I+
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            YC+ G V +A  + DEM+ KG  MD  T NT+L  LC+ K   +A++L +   +RG  P
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  ++ T++  + K+ N   AL L+D M ++ + P I TYNTLI G C++  +++A    
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +++ + + P+  +Y I+I+ YC  G +  AFR   +MV    KP +V+CNT++ G C  
Sbjct: 548 NELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA +     V +G   D I+YNTLI    +  ++D A      ME +GL PD  TY
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKG----------LNPDRS----------------- 451
           NV+L+     GR  ++  +L ++ + G          L P  +                 
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESS 727

Query: 452 ---------TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
                    TY   +NG  +   LKEA    DEM+Q+G   D +
Sbjct: 728 EKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSS 771



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 153/510 (30%), Positives = 253/510 (49%), Gaps = 38/510 (7%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREG--FLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +A++      ++GV P     N +++A  R      + +  +  S+    L P  +T+N 
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++  C KG    A   L  M   GLSPD  TYNTLL   CRK  + EA  +   M R G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +AP   +++TL+  F+R G + +A      M + G  PD   Y ++  G C+ G V EA 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF 333

Query: 191 KMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           +++DEM      + DVVTYNT+++   + +  ++A  L  EM ++GV P   T   ++  
Sbjct: 334 RLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI------- 302
            CK+G + +AL   + + ++ + PD++TYNTLID +CK G + KA  L  +M+       
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 303 ----------------------------SRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
                                        R   P+ +SYG ++  Y    +   A RLW 
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           +M+ + + P++ + NT+IKG CR     +A + L+++V +G+ PD  +YN +I+ + +E 
Sbjct: 514 QMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEG 573

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           +++ AF   +KM      PDV+T N ++ G C  G++  +  +    +EKG   D  TY 
Sbjct: 574 DLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYN 633

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TLI       ++  A  F D+M  +G  PD
Sbjct: 634 TLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 171/361 (47%), Gaps = 38/361 (10%)

Query: 128 RRGVAPDIVSFSTLIGIFSRN-GQLDRA-LMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           RRGV P + + + ++   SR+   L +A L  FR +    L P++  + ++++ +C    
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHC---- 219

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
                        KG + D +   + + G                    G+ PD  T+ T
Sbjct: 220 ------------SKGTLADALATLSTMQGF-------------------GLSPDAVTYNT 248

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L++ HC+ G + +A  L   M +  I P   TYNTL+  F ++G +++A K+   M +  
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK-PTLVSCNTIIKGYCRSGDASKA 364
             P+  +Y +L  G C  G V EAFRL  EM       P +V+ NT++    +   +S A
Sbjct: 309 FEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDA 368

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
              L +M  +GV P  +++N ++    +E  +++A   + K+  +GL PDVITYN ++  
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +C+ G +  +  ++  M+ KGL  D  T  T++         ++A        QRGFVPD
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 485 D 485
           +
Sbjct: 489 E 489



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 39/227 (17%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC   K+D A        +KG   D +TYNTLI + C+ G ++ A    + M  KG
Sbjct: 600 LMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG 659

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P  FTYN +++ L + GR + A  +L ++   G    +     L   S  + ++ E E
Sbjct: 660 LQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHE 719

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII--IN 178
                                       G+         E +S+    DN L T +  +N
Sbjct: 720 ----------------------------GK--------PEAESSEKAQDNALETYMERLN 743

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC-RAKMLTEA 224
           G C  G + EA  + DEM++KG  +D  TY T++ GL  R K  T A
Sbjct: 744 GLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQTHA 790


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  310 bits (793), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 165/485 (34%), Positives = 276/485 (56%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK   +DSA     +M + G+ P+ VTY  +I   C+ G +++A+++ N M  K 
Sbjct: 335 LMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKD 394

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF  NSLI G  K    + A ++ DE +  G++ +  TYN+LL   C++  MSEA 
Sbjct: 395 ISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEAC 453

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I+ +M R+GV P +VS++ +I    + G +D A   F EM   GL P+ + Y+++++GY
Sbjct: 454 SIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGY 513

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A  + D M  +       T N I+NGLC+A   +E+ D   ++++ G  P  
Sbjct: 514 FKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTC 573

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I G  K+G++N AL ++  M +  + P++ TY  LI+GFCK   M+ A K+  +
Sbjct: 574 MTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDE 633

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M ++ I  +   Y  LI+G+C  G +  A +L  E+   G+ P  V  +++I G+ +  +
Sbjct: 634 MKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQN 693

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M++EG+  D   Y TLI+G ++E  +  A  L ++M  +G++PD+ITY+V
Sbjct: 694 MEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSV 753

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C +G++ +++ IL  M  K + P    Y TLI GH  + NL+EAFR H+EML +G
Sbjct: 754 LIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKG 813

Query: 481 FVPDD 485
            VPDD
Sbjct: 814 LVPDD 818



 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 256/456 (56%), Gaps = 1/456 (0%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D+  +N L+N+Y +   + +A    NS+  K + P +   N  ++ L K      A++V 
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           ++M   G+  D AT + ++  S R+  + EAE  F E   +GV  D  ++S +I    + 
Sbjct: 213 NKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKK 272

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
                AL   REM+  G VP  V++T +I    + G +LEA+K++ EML  G  M+VV  
Sbjct: 273 PDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVA 332

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
            T++ G C+   L  A +LF++M E G+ P+  T+  +I   CK+GNM+KA  +++ M  
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K I P +   N+LI G+ K    E+A+KL+ + ++  I+ N  +Y  L++  C  G ++E
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSE 451

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +W +MV KG++P++VS N +I G+C+ GD   A+    +M+ +G+ P+ I+Y+ L++
Sbjct: 452 ACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMD 511

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ ++ + + AF L  +M  + + P   T N+I+ G C+ GR  +S+  L +++++G  P
Sbjct: 512 GYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIP 571

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              TY  +I+G V + ++  A   + EM + G  P+
Sbjct: 572 TCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPN 607



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 272/554 (49%), Gaps = 70/554 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+  K  +I+ A      + +K + P     N  ++   +   + EA  + N M+ KG
Sbjct: 160 LLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKG 219

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K    T + +I    ++G+ + A+    E    G+  D   Y+ ++   C+K +   A 
Sbjct: 220 VKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAAL 279

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G  P  V F+ +IG+  + G++  A+    EM S G   + V+ T ++ GY
Sbjct: 280 GLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGY 339

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  AL++ D+M E G   + VTY  I+   C+   + +A +++N+M  + + P  
Sbjct: 340 CKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTV 399

Query: 241 YTFTTLIHGH----------------------------------CKDGNMNKALNLFDIM 266
           +   +LI G+                                  CK+G M++A ++++ M
Sbjct: 400 FNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKM 459

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            +K ++P +V+YN +I G C+ G+M+ AN ++ +M+ + + PN I+Y +L++GY   G  
Sbjct: 460 VRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDT 519

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE------------ 374
             AF L+  M G+ I P+  +CN II G C++G  S++ + L K+V E            
Sbjct: 520 EYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCI 579

Query: 375 -----------------------GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
                                  GV P+  +Y  LINGF +  NMD A  ++ +M+N+G+
Sbjct: 580 IDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGI 639

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
             DV  Y  ++ GFCR+G M ++  +L  + E GL+P++  Y+++I+G     N++ A  
Sbjct: 640 ELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALH 699

Query: 472 FHDEMLQRGFVPDD 485
            H  M+  G +P D
Sbjct: 700 LHKRMINEG-IPCD 712



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 229/396 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ K+  A     +M +KGV P  V+YN +I  +C++G ++ A  +   M  KG
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP + TY+ L++G  KKG  + A  + D M    ++P   T N ++   C+    SE++
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQ 558

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   ++ + G  P  ++++ +I  F + G ++ AL  + EM   G+ P+   YT +ING+
Sbjct: 559 DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGF 618

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  +  ALK+ DEM  KG  +DV  Y  +++G CR   +  A  L +E+ E G+ P+ 
Sbjct: 619 CKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNK 678

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++++I G  K  NM  AL+L   M  + I  D+  Y TLI G  K G++  A++L+A+
Sbjct: 679 VVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAE 738

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+++ I P+ I+Y +LI+G C+ G +  A ++  +M  K + PT+   NT+I G+ + G+
Sbjct: 739 MLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGN 798

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
             +A    ++M+ +G+ PD  +Y+ L+NG V++ N+
Sbjct: 799 LQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 204/419 (48%), Gaps = 36/419 (8%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            +N L+N   K  R + A +  + +++  + P     N  L E  +   + EA +++ +M
Sbjct: 156 VFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           + +GV  D  + S +I    R G+L+ A  +FRE K+                       
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKN----------------------- 252

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
                       KG  +D   Y+ ++  +C+      A  L  EM ++G  P    FT +
Sbjct: 253 ------------KGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRV 300

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I    K G M +A+ +   M       ++V   TL+ G+CK G+++ A +L+  M    I
Sbjct: 301 IGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGI 360

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            PN ++Y ++I   C  G++ +A+ ++ +M  K I PT+ + N++I+GY ++    +A +
Sbjct: 361 CPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASK 420

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              + V+ G+  +  +YN+L++   +E  M +A ++  KM  +G+ P V++YN ++ G C
Sbjct: 421 LFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHC 479

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +QG M  +  +   M+EKGL P+  TY+ L++G+  + + + AF  +D M      P D
Sbjct: 480 QQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSD 538


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  310 bits (793), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 159/462 (34%), Positives = 271/462 (58%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M+ +G  PD V+Y+T+IN YC  G L++  +L+  M  KGLKP ++TYNS+I  LCK G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A+ VL EM+  G+ PDT  Y TL+   C+  N+  A ++F EM ++ + PD ++++ 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I    R G++  A   F +M S G+ PD V YT +I+GYC++G + +A  + ++M++ G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              +VVTY  + +GLC+   +  A++L +EM  +G+  +  T+ +L++G CK GN+ +A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L + M    + PD +T+ TL+D +CK GEM KA++L  +M+ R + P  I++ +L+NG+
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + +  RL   M+ KGI P   + N+++K YC   +     E    M + GV PDS
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YN LI G  +  NM +A+ L  +M  +G      +YN I+ GF ++ ++ ++  +   
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEE 420

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           M  +G+  D   Y   ++    + N++ A    DE ++  F+
Sbjct: 421 MRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIENCFL 462



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 140/429 (32%), Positives = 245/429 (57%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M  +G  P V +Y+++ING C  G   +  +++ EM   GL P+  TYN++++  C+   
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + +AE +  EM  +G+ PD V ++TLI  F + G +  A   F EM+   +VPD + YT 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I G CR G ++EA K+ ++M  +G   D VTY T+++G C++  + +A  L N+M++ G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P+  T+T L  G CK G ++ A  L   M  K ++ +I TYN+L++G CK G + +A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           KL  +M    + P+ I++  L++ YC  G + +A  L  EM+ +G++PT+++ N ++ G+
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C SG     +  L+ M+ +G+ P++ +YN+L+  +    NM     +   M  +G++PD 
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            TYN+++ G C+   M ++  +   M EKG N   S+Y ++I G   +  + EA    +E
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEE 420

Query: 476 MLQRGFVPD 484
           M + G   D
Sbjct: 421 MRREGMAAD 429



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 218/398 (54%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LCK  K+D A+  L EM  +G+ PDTV Y TLI+ +C+ G ++ A++L + M  + + P 
Sbjct: 55  LCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPD 114

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
              Y ++I GLC+ G+   A +V ++M   G+ PD  TY TL+   C+   M +A  +  
Sbjct: 115 FIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHN 174

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           +M + G+ P++V+++ L     + GQ+D A     EM   GL  +   Y  ++NG C++G
Sbjct: 175 QMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSG 234

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + +A+K+ +EM   G   D +T+ T+++  C+   + +A +L  EML+RG+ P   TF 
Sbjct: 235 NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFN 294

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            L++G C  G +     L   M +K I P+  TYN+L+  +C    M    +++  M +R
Sbjct: 295 VLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + P+  +Y ILI G+C   ++ EA+ L  EM  KG   T  S N+IIKG+ +    S+A
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEA 414

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
            E   +M  EG+  D+  YN  ++    E NM+ A  L
Sbjct: 415 RELFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 186/337 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  K+  A     +M  +GV PD VTY TLI+ YC+ G +E+AF L N M   G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY +L +GLCK G+ D A E+L EM   GL  +  TYN+L+   C+  N+ +A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G+ PD ++F+TL+  + + G++ +A    REM   GL P  + + +++NG+
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + +  ++   MLEKG + +  TYN+++   C    +    +++  M  RGV PD 
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI GHCK  NM +A  L   M +K       +YN++I GF K  ++ +A +L+ +
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEE 420

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           M    ++ +   Y + ++     G++  A  L  E +
Sbjct: 421 MRREGMAADAEIYNLFVDISYGEGNMETALELCDEAI 457


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  310 bits (793), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 162/485 (33%), Positives = 262/485 (54%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK   +   +  L ++ ++GV P+  TYN  I   C+ G L+ A +++  +  +G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TYN+LI GLCK  +   A+  L +M+  GL PD+ TYNTL+   C+   +  AE
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +    G  PD  ++ +LI      G+ +RAL  F E    G+ P+ +LY  +I G 
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G +LEA ++ +EM EKG + +V T+N ++NGLC+   +++AD L   M+ +G FPD 
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF  LIHG+     M  AL + D+M    + PD+ TYN+L++G CK  + E   + +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +  +PN  ++ IL+   C    + EA  L  EM  K + P  V+  T+I G+C++GD
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 361 ASKADEFLSKM-VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A     KM  +  V   + +YN +I+ F  + N+  A  L  +M ++ L PD  TY 
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++ GFC+ G ++     L  M+E G  P  +T   +IN    ++ + EA      M+Q+
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701

Query: 480 GFVPD 484
           G VP+
Sbjct: 702 GLVPE 706



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 247/476 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L      D A      M  +G+ PD  ++   + ++C+      A +L+N+MS +G
Sbjct: 117 IMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  V  Y +++ G  ++       E+  +ML  G+S   +T+N LL   C+K ++ E E
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  ++ +RGV P++ +++  I    + G+LD A+     +   G  PD + Y  +I G 
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+N    EA     +M+ +G   D  TYNT++ G C+  M+  A+ +  + +  G  PD 
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +LI G C +G  N+AL LF+    K IKP+++ YNTLI G    G + +A +L  +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P   ++ IL+NG C MG V++A  L   M+ KG  P + + N +I GY     
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E L  M+  GVDPD  +YN+L+NG  +    +        M  +G  P++ T+N+
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +L   CR  ++ ++  +L  M  K +NPD  T+ TLI+G     +L  A+    +M
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592



 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 138/417 (33%), Positives = 239/417 (57%), Gaps = 1/417 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+ K   A+++L +M  +G+ PD+ TYNTLI  YC+ G ++ A +++      G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY SLI+GLC +G  +RA  + +E L  G+ P+   YNTL+     +  + EA 
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS +G+ P++ +F+ L+    + G +  A    + M S G  PD   + I+I+GY
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                +  AL++ D ML+ G   DV TYN++LNGLC+     +  + +  M+E+G  P+ 
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF  L+   C+   +++AL L + M  KS+ PD VT+ TLIDGFCK G+++ A  L+  
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591

Query: 301 MI-SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           M  + K+S +  +Y I+I+ +    +VT A +L+ EMV + + P   +   ++ G+C++G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + +   +FL +M+  G  P   +   +IN    E+ + +A  ++ +M  +GLVP+ +
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 260/518 (50%), Gaps = 36/518 (6%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + + CK  +  +A   L  M  +G   + V Y T++  +  E F  E ++L   M   G+
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
              + T+N L+  LCKKG     +++LD++++ G+ P+  TYN  +   C++  +  A  
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +   +  +G  PD+++++ LI    +N +   A +Y  +M + GL PD+  Y  +I GYC
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G V  A ++  + +  G V D  TY ++++GLC       A  LFNE L +G+ P+  
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            + TLI G    G + +A  L + M++K + P++ T+N L++G CK+G +  A+ L   M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           IS+   P+  ++ ILI+GY +   +  A  +   M+  G+ P + + N+++ G C++   
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
               E    MV +G  P+  ++N L+    R   +D+A  L+ +M+N+ + PD +T+  +
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572

Query: 422 LTGFCRQG----------RMHD--------------------------SELILWRMIEKG 445
           + GFC+ G          +M +                          +E +   M+++ 
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           L PD  TY  +++G     N+   ++F  EM++ GF+P
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 230/457 (50%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   +YN +++     G+ ++A ++   M  +G+ P V+++   +   CK  R   A  +
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ M   G   +   Y T++     +   +E  E+F +M   GV+  + +F+ L+ +  +
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +        ++   G++P+   Y + I G C+ G +  A++M   ++E+G   DV+T
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ GLC+     EA+    +M+  G+ PD YT+ TLI G+CK G +  A  +     
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
                PD  TY +LIDG C  GE  +A  L+ + + + I PN I Y  LI G  + G + 
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA +L  EM  KG+ P + + N ++ G C+ G  S AD  +  M+S+G  PD  ++N LI
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+  +  M+ A  ++  M + G+ PDV TYN +L G C+  +  D       M+EKG  
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  T+  L+        L EA    +EM  +   PD
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 236/445 (53%)

Query: 40  YCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD 99
           Y R+G ++EA  +   M     +P VF+YN++++ L   G  D+A +V   M   G++PD
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
             ++   +   C+      A  +   MS +G   ++V++ T++G F            F 
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           +M ++G+      +  ++   C+ G V E  K+ D+++++G + ++ TYN  + GLC+  
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            L  A  +   ++E+G  PD  T+  LI+G CK+    +A      M  + ++PD  TYN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           TLI G+CK G ++ A ++  D +     P+  +Y  LI+G C  G    A  L+ E +GK
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           GIKP ++  NT+IKG    G   +A +  ++M  +G+ P+  ++N L+NG  +   +  A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             LV  M ++G  PD+ T+N+++ G+  Q +M ++  IL  M++ G++PD  TY +L+NG
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
               +  ++    +  M+++G  P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPN 530



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 237/474 (50%), Gaps = 37/474 (7%)

Query: 48  EAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNT 105
           +A ++ NSM  + G K  + TY S+I  L   G+ +  +EVL +M + +G       Y  
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
            +    RK  + EA  +F  M      P + S++ ++ +   +G  D+A   +  M+  G
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG----------- 214
           + PD   +TI +  +C+      AL++ + M  +GC M+VV Y T++ G           
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201

Query: 215 ------------------------LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
                                   LC+   + E + L +++++RGV P+ +T+   I G 
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+ G ++ A+ +   + ++  KPD++TYN LI G CK  + ++A      M++  + P+ 
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +Y  LI GYC  G V  A R+  + V  G  P   +  ++I G C  G+ ++A    ++
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
            + +G+ P+ I YNTLI G   +  + +A  L ++M  +GL+P+V T+N+++ G C+ G 
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + D++ ++  MI KG  PD  T+  LI+G+ +Q  ++ A    D ML  G  PD
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  310 bits (793), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 155/461 (33%), Positives = 260/461 (56%), Gaps = 4/461 (0%)

Query: 1   MVNALC---KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++N LC   +DH +  A   L +M + G+ P  VT+ TL+N  C +  + +A +L + + 
Sbjct: 110 LINCLCHSNRDH-VHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIG 168

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             G  P + TY ++I GLCK G    A ++L +M + G  PD   YNT++   C+    +
Sbjct: 169 KMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRAN 228

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA   F EM  +G+ P++V++S+++  F   GQL+ A   F++M    ++P+ V +TI++
Sbjct: 229 EAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILV 288

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G C+ G +LEA ++ + M E G   D  TY+ +++G C    + EA  LF+ M+ +G  
Sbjct: 289 DGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFA 348

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P    +  LI+GHCK   +N+A  L   M  + + PD VTY+TL+ GFC+ G  + A KL
Sbjct: 349 PSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKL 408

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           + +M S  + P+ I+Y IL++G C  GH+ EAFRL   M    I+P +   N +I+G C 
Sbjct: 409 FKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCN 468

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G    A E  S +  +G+ P  ++Y  +I+G ++E   ++A  +  KM   G +P+  T
Sbjct: 469 FGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCT 528

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           YNV + GF R G   ++  ++  M+ +G + D ST+  L++
Sbjct: 529 YNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 255/460 (55%), Gaps = 2/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR--CDRAK 85
           P  V +N L+ +  ++        L   M    ++P V+T   LIN LC   R     A 
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
             L +M ++GL P   T+ TLL   C K  + +A ++F E+ + G AP +++++T+I   
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G    AL   ++M+  G  PD V Y  +I+  C++    EA+    EM+++G   +V
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY++IL+G C    L EA  LF +M+ R V P+  TFT L+ G CK+G + +A  +F++
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           MT+  ++PD  TY+ L+DG+C   +M++A KL+  M+ +  +P+   Y ILING+C    
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA  L  EM  + + P  V+ +T+++G+C++G    A +   +M S G+ PDSI+Y+ 
Sbjct: 367 LNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++G  +  ++D+AF L+  M+   + P +  YN+++ G C  G++  +  +   +  KG
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           + P   TYT +I+G + +    EA     +M+  G +P+ 
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNS 526



 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 146/477 (30%), Positives = 257/477 (53%), Gaps = 3/477 (0%)

Query: 13  SAKMFLC-EMEQKGVYPDTVTYNTLINAYCREG--FLEEAFQLMNSMSGKGLKPGVFTYN 69
           S  + LC +M+   + P+  T   LIN  C      +  AF  +  M   GL+P   T+ 
Sbjct: 86  STVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFG 145

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +L+NGLC K +   A ++ DE+ +MG +P   TY T++   C+  + + A ++  +M  +
Sbjct: 146 TLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEK 205

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  PD+V+++T+I    ++ + + A+ +F EM   G+ P+ V Y+ I++G+C  G + EA
Sbjct: 206 GCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEA 265

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             +  +M+ +  + + VT+  +++GLC+  M+ EA  +F  M E GV PD YT++ L+ G
Sbjct: 266 TSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDG 325

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           +C    M++A  LFDIM  K   P +  YN LI+G CK   + +A  L ++M  R ++P+
Sbjct: 326 YCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPD 385

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y  L+ G+C  G    A +L+ EM   G+ P  ++ + ++ G C+ G   +A   L 
Sbjct: 386 TVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLK 445

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M    ++P    YN LI G      ++ A  L S +  +G+ P V+TY V+++G  ++G
Sbjct: 446 AMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEG 505

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +++  +  +M+  G  P+  TY   I G +   +   A R  +EM+ RGF  D +
Sbjct: 506 LSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSS 562



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 143/315 (45%), Gaps = 62/315 (19%)

Query: 232 LERGVFPDFYTFTTLIHGH---------------------CKDGN----MNKALNLFDIM 266
           +E G FP F +F   IH H                     C + N    +  A+  F+ +
Sbjct: 1   METGTFPKFRSFLFFIHQHFTTSTASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQL 60

Query: 267 TQKSIKPDIVTYNTLIDGFCK----------VGEMEKAN--------------------- 295
                 P +V +N L+    K            +M+ +N                     
Sbjct: 61  LGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRD 120

Query: 296 ------KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
                      M    + P ++++G L+NG CS   + +A +L+ E+   G  P+L++  
Sbjct: 121 HVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYT 180

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           TIIKG C+ G  + A + L KM  +G  PD ++YNT+I+   ++   ++A    S+M +Q
Sbjct: 181 TIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQ 240

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+ P+V+TY+ IL GFC  G+++++  +  +MI + + P+  T+T L++G   +  + EA
Sbjct: 241 GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEA 300

Query: 470 FRFHDEMLQRGFVPD 484
            R  + M + G  PD
Sbjct: 301 RRVFEMMTENGVEPD 315



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 80/153 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A   L  M++  + P    YN LI   C  G LE A +L +++  KG
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY  +I+GL K+G  + A E+  +M+  G  P++ TYN  +    R  + S A 
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAV 546

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            +  EM  RG + D  +F  L+ + S +  + R
Sbjct: 547 RLIEEMVGRGFSADSSTFQMLLDLESNDEIISR 579


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 153/487 (31%), Positives = 274/487 (56%), Gaps = 11/487 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC++ ++  A   +  M ++G  PD VTY T++N  C+ G    A  ++  M    
Sbjct: 16  LMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQ 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V  Y+++++ LCK G   +A+ +  EM + G+ P+  TYN ++   C     S+AE
Sbjct: 76  IKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAE 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M  R + PD+V+FS LI  F + G++  A   +REM    + P  + Y+ +I+G+
Sbjct: 136 QLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGF 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM-----------LTEADDLFN 229
           C++  + +A  M D M+ KGC  D++T NT+++G CRAK            +  A DLF 
Sbjct: 196 CKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQ 255

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
           EM+  GV PD  T  TL+ G C++G + KAL +F +  +  +  D  T N +I+G CK  
Sbjct: 256 EMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGN 315

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           ++++A  L+  +    +  + ++Y ILI  +   G+   A  ++ EM+ KGI P+ V+ N
Sbjct: 316 KVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYN 375

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +++ G+C+     +A + +  MVSEG  PD ++++TLI G+ +   +D    L S+M  +
Sbjct: 376 SMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQR 435

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           GLV D ITYN ++ GFC+ G ++ ++ I   M+  G+ PD  T+ +++ G  ++  L++ 
Sbjct: 436 GLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKG 495

Query: 470 FRFHDEM 476
               +++
Sbjct: 496 LTMLEDL 502



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 138/418 (33%), Positives = 234/418 (55%), Gaps = 11/418 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCKD     A+    EM +KG++P+ +TYN +I+ YC  G   +A QL+  M  + 
Sbjct: 86  IVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERN 145

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+++LIN   K+G+   A+E+  EML+  + P T TY++++   C+   + +A+
Sbjct: 146 IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAK 205

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGI-----------FSRNGQLDRALMYFREMKSAGLVPD 169
            +F  M  +G +PDI++ +TLI             F + G ++ A   F+EM S G+ PD
Sbjct: 206 HMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPD 265

Query: 170 NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
            V    ++ G C NG + +AL+M     +    +D  T N I+NG+C+   + EA DLFN
Sbjct: 266 IVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFN 325

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
            +   GV  D  T+  LI    K+GN  +A +++  M  K I P  VTYN+++DGFCK  
Sbjct: 326 SLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQN 385

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +E+A ++   M+S   SP+ +++  LI GYC  G V +   L+ EM  +G+    ++ N
Sbjct: 386 RLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYN 445

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            +I G+C+ GD + A +   +MVS GV PD+I++ +++ G   +  + K   ++  ++
Sbjct: 446 ALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 185/336 (55%), Gaps = 13/336 (3%)

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM 220
           M   G   + V +T ++NG CR G VL+AL + D M+E+G   D VTY TI+NG+C+   
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
              A ++  +M E  +  +   ++ ++   CKDGN  KA N+F  M +K I P+++TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           +IDG+C  G+   A +L  DMI R I P+ +++  LIN +   G V+ A  L+ EM+ + 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE------ 394
           I PT ++ +++I G+C+      A      MVS+G  PD I+ NTLI+G  R +      
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 395 -----NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG-LNP 448
                N++ A  L  +M + G+ PD++T N +L G C  G++  + L ++++ +K  ++ 
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKA-LEMFKVFQKSKMDL 299

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D +T   +ING    N + EA+   + +   G   D
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETD 335



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 89/145 (61%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM  KG+ P TVTYN++++ +C++  LEEA Q+++SM  +G  P V T+++LI G CK G
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R D   E+  EM Q GL  DT TYN L+   C+  +++ A++IF EM   GV PD ++F 
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFR 480

Query: 140 TLIGIFSRNGQLDRALMYFREMKSA 164
           +++       +L + L    +++ +
Sbjct: 481 SMLAGLCTKAELQKGLTMLEDLQKS 505


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  309 bits (791), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 164/485 (33%), Positives = 271/485 (55%), Gaps = 4/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEM-EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   CK  K+D A+  L  M E+  + PD   Y  LI+ YCR G +++A +L++ M   
Sbjct: 268 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 327

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GLK  +F  NSLING CK+G    A+ V+  M+   L PD+ +YNTLL   CR+ + SEA
Sbjct: 328 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 387

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  +M + G+ P +++++TL+    R G  D AL  +  M   G+ PD V Y+ +++G
Sbjct: 388 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 447

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             +      A  +  ++L +G     +T+NT+++GLC+   + EA+++F++M + G  PD
Sbjct: 448 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 507

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G+CK  N+ +A  +   M ++ I P I  YN+LI G  K   + +   L  
Sbjct: 508 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 567

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R ++PN ++YG LI+G+C  G + +AF  ++EM   G+   ++ C+T++ G  R G
Sbjct: 568 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 627

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+  + KMV  G  PD   +   +   +R   + K    + +     L+P+ I YN
Sbjct: 628 RIDEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYN 684

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           + + G C+ G++ D+      +  KG  PD  TY TLI+G+ +  N+ EAFR  DEML+R
Sbjct: 685 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 744

Query: 480 GFVPD 484
           G VP+
Sbjct: 745 GLVPN 749



 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 269/483 (55%), Gaps = 3/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +I  A+  +  M    + PD+ +YNTL++ YCREG   EAF L + M  +G
Sbjct: 339 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 398

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYN+L+ GLC+ G  D A ++   M++ G++PD   Y+TLL    + EN   A 
Sbjct: 399 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 458

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ ++  RG     ++F+T+I    + G++  A   F +MK  G  PD + Y  +I+GY
Sbjct: 459 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 518

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +A K++  M  +     +  YN++++GL +++ L E  DL  EM  RG+ P+ 
Sbjct: 519 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 578

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK+G ++KA + +  MT+  +  +I+  +T++ G  ++G +++AN L   
Sbjct: 579 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 638

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     P++  +      Y ++  + ++     E     + P  +  N  I G C++G 
Sbjct: 639 MVDHGFFPDHECFLKSDIRYAAIQKIADSLD---ESCKTFLLPNNIVYNIAIAGLCKTGK 695

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A  F S +  +G  PD+ +Y TLI+G+    N+D+AF L  +M  +GLVP+++TYN 
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 755

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+   +  ++ +  ++ +KGL P+  TY TLI+G+    N+  AF+  D+M++ G
Sbjct: 756 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 815

Query: 481 FVP 483
             P
Sbjct: 816 ISP 818



 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 261/462 (56%), Gaps = 1/462 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G  P   + N+L+N   + G    A  +   M   G+ P VF  + ++N  CK G+
Sbjct: 148 MGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGK 207

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A   + +M  +G+ P+  TY++L+       ++  A+ +   MS +GV+ ++V+++ 
Sbjct: 208 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 267

Query: 141 LIGIFSRNGQLDRALMYFREMK-SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           LI  + +  ++D A    R M+  A LVPD   Y ++I+GYCR G + +A+++ DEML  
Sbjct: 268 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 327

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   ++   N+++NG C+   + EA+ +   M++  + PD Y++ TL+ G+C++G+ ++A
Sbjct: 328 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 387

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            NL D M Q+ I+P ++TYNTL+ G C+VG  + A ++W  M+ R ++P+ + Y  L++G
Sbjct: 388 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 447

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
              M +   A  LW +++ +G   + ++ NT+I G C+ G   +A+E   KM   G  PD
Sbjct: 448 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 507

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y TLI+G+ +  N+ +AF +   ME + + P +  YN +++G  +  R+ +   +L 
Sbjct: 508 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 567

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            M  +GL P+  TY  LI+G   +  L +AF  + EM + G 
Sbjct: 568 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609



 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 166/518 (32%), Positives = 271/518 (52%), Gaps = 33/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNA CKD K+D A  F+ +ME  GV P+ VTY++LIN Y   G +E A  ++  MS KG
Sbjct: 198 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           +   V TY  LI G CK+ + D A++VL  M +   L PD   Y  L+   CR   + +A
Sbjct: 258 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 317

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM R G+  ++   ++LI  + + G++  A      M    L PD+  Y  +++G
Sbjct: 318 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 377

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YCR G   EA  + D+ML++G    V+TYNT+L GLCR     +A  +++ M++RGV PD
Sbjct: 378 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPD 437

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              ++TL+ G  K  N   A  L+  +  +      +T+NT+I G CK+G+M +A +++ 
Sbjct: 438 EVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 497

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M     SP+ I+Y  LI+GYC   +V +AF++   M  + I P++   N++I G  +S 
Sbjct: 498 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 557

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +  + L++M   G+ P+ ++Y  LI+G+ +E  +DKAF+   +M   GL  ++I  +
Sbjct: 558 RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 617

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRS---------------------------- 451
            +++G  R GR+ ++ L++ +M++ G  PD                              
Sbjct: 618 TMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLL 677

Query: 452 ----TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                Y   I G      + +A RF   +  +GFVPD+
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715



 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 268/485 (55%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K+ +  +A     +M + G+ PD    + ++NA+C++G ++EA   +  M   G
Sbjct: 163 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 222

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TY+SLING    G  + AK VL  M + G+S +  TY  L+   C++  M EAE
Sbjct: 223 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 282

Query: 121 EIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++   M     + PD  ++  LI  + R G++D A+    EM   GL  +  +   +ING
Sbjct: 283 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 342

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G + EA  +   M++     D  +YNT+L+G CR    +EA +L ++ML+ G+ P 
Sbjct: 343 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 402

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL+ G C+ G  + AL ++ +M ++ + PD V Y+TL+DG  K+   E A+ LW 
Sbjct: 403 VLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWK 462

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           D+++R  + + I++  +I+G C MG + EA  ++ +M   G  P  ++  T+I GYC++ 
Sbjct: 463 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 522

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  +A +    M  E + P    YN+LI+G  +   + +   L+++M  +GL P+++TY 
Sbjct: 523 NVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYG 582

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+C++G +  +    + M E GL+ +    +T+++G      + EA     +M+  
Sbjct: 583 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 642

Query: 480 GFVPD 484
           GF PD
Sbjct: 643 GFFPD 647



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 231/425 (54%), Gaps = 3/425 (0%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P VF  + ++    +KG    A  V D M + G  P   + N+LL    +      A
Sbjct: 119 AFSPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 176

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ +M R G+ PD+   S ++  F ++G++D A  + ++M++ G+ P+ V Y  +ING
Sbjct: 177 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING 236

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-P 238
           Y   G V  A  +   M EKG   +VVTY  ++ G C+   + EA+ +   M E     P
Sbjct: 237 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 296

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +  LI G+C+ G ++ A+ L D M +  +K ++   N+LI+G+CK GE+ +A  + 
Sbjct: 297 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 356

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+   + P+  SY  L++GYC  GH +EAF L  +M+ +GI+PT+++ NT++KG CR 
Sbjct: 357 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 416

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A +    M+  GV PD + Y+TL++G  + EN + A  L   +  +G     IT+
Sbjct: 417 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 476

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N +++G C+ G+M ++E I  +M + G +PD  TY TLI+G+   +N+ +AF+    M +
Sbjct: 477 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 536

Query: 479 RGFVP 483
               P
Sbjct: 537 EPISP 541



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 225/415 (54%), Gaps = 3/415 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+    D A      M ++GV PD V Y+TL++   +    E A  L   +  +G
Sbjct: 409 LLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG 468

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 T+N++I+GLCK G+   A+E+ D+M  +G SPD  TY TL+   C+  N+ +A 
Sbjct: 469 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAF 528

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M R  ++P I  +++LI    ++ +L        EM   GL P+ V Y  +I+G+
Sbjct: 529 KVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGW 588

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A     EM E G   +++  +T+++GL R   + EA+ L  +M++ G FPD 
Sbjct: 589 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 648

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F   +    +   + K  +  D   +  + P+ + YN  I G CK G+++ A + ++ 
Sbjct: 649 ECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 705

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +   P+  +Y  LI+GY + G+V EAFRL  EM+ +G+ P +V+ N +I G C+S +
Sbjct: 706 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 765

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
             +A     K+  +G+ P+ ++YNTLI+G+ +  NMD AF L  KM  +G+ P +
Sbjct: 766 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 199/351 (56%), Gaps = 4/351 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K+  A+    +M+  G  PD +TY TLI+ YC+   + +AF++  +M  + 
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +  YNSLI+GL K  R     ++L EM   GL+P+  TY  L+   C++  + +A 
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + EM+  G++ +I+  ST++    R G++D A +  ++M   G  PD+  +   +   
Sbjct: 599 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---LKSD 655

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R   + +     DE  +   + + + YN  + GLC+   + +A   F+ +  +G  PD 
Sbjct: 656 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ TLIHG+   GN+++A  L D M ++ + P+IVTYN LI+G CK   +++A +L+  
Sbjct: 716 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 775

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           +  + + PN ++Y  LI+GYC +G++  AF+L  +M+ +GI P+ + CN +
Sbjct: 776 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS-IQCNLL 825



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 196/404 (48%), Gaps = 55/404 (13%)

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN-------------------VLY 173
           P++ S+  L+ I SR    D    Y  ++       D                     ++
Sbjct: 66  PNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVF 125

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            +I+  Y   G    AL + D M + G +  + + N++LN L +      A  ++ +M+ 
Sbjct: 126 DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIR 185

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+ PD +  + +++  CKDG +++A      M    ++P+IVTY++LI+G+  +G++E 
Sbjct: 186 VGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEA 245

Query: 294 ANKLWADMISRKISPNYISYGIL------------------------------------I 317
           A  +   M  + +S N ++Y +L                                    I
Sbjct: 246 AKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLI 305

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +GYC  G + +A RL  EM+  G+K  L  CN++I GYC+ G+  +A+  +++MV   + 
Sbjct: 306 DGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLK 365

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PDS SYNTL++G+ RE +  +AF L  KM  +G+ P V+TYN +L G CR G   D+  I
Sbjct: 366 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 425

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
              M+++G+ PD   Y+TL++G     N + A     ++L RGF
Sbjct: 426 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 469


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  309 bits (791), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 164/485 (33%), Positives = 271/485 (55%), Gaps = 4/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEM-EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   CK  K+D A+  L  M E+  + PD   Y  LI+ YCR G +++A +L++ M   
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 361

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GLK  +F  NSLING CK+G    A+ V+  M+   L PD+ +YNTLL   CR+ + SEA
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  +M + G+ P +++++TL+    R G  D AL  +  M   G+ PD V Y+ +++G
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 481

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             +      A  +  ++L +G     +T+NT+++GLC+   + EA+++F++M + G  PD
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G+CK  N+ +A  +   M ++ I P I  YN+LI G  K   + +   L  
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 601

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R ++PN ++YG LI+G+C  G + +AF  ++EM   G+   ++ C+T++ G  R G
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 661

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+  + KMV  G  PD   +   +   +R   + K    + +     L+P+ I YN
Sbjct: 662 RIDEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYN 718

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           + + G C+ G++ D+      +  KG  PD  TY TLI+G+ +  N+ EAFR  DEML+R
Sbjct: 719 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778

Query: 480 GFVPD 484
           G VP+
Sbjct: 779 GLVPN 783



 Score =  301 bits (770), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 162/512 (31%), Positives = 279/512 (54%), Gaps = 32/512 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +I  A+  +  M    + PD+ +YNTL++ YCREG   EAF L + M  +G
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 432

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYN+L+ GLC+ G  D A ++   M++ G++PD   Y+TLL    + EN   A 
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 492

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ ++  RG     ++F+T+I    + G++  A   F +MK  G  PD + Y  +I+GY
Sbjct: 493 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 552

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +A K++  M  +     +  YN++++GL +++ L E  DL  EM  RG+ P+ 
Sbjct: 553 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 612

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK+G ++KA + +  MT+  +  +I+  +T++ G  ++G +++AN L   
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672

Query: 301 MIS--------------------RKIS------------PNYISYGILINGYCSMGHVTE 328
           M+                     +KI+            PN I Y I I G C  G V +
Sbjct: 673 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A R +  +  KG  P   +  T+I GY  +G+  +A     +M+  G+ P+ ++YN LIN
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 792

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  + EN+D+A  L  K+  +GL P+V+TYN ++ G+C+ G M  +  +  +MIE+G++P
Sbjct: 793 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 852

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
              TY+ LING     +++ + +  ++M++ G
Sbjct: 853 SVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884



 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 261/462 (56%), Gaps = 1/462 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G  P   + N+L+N   + G    A  +   M   G+ P VF  + ++N  CK G+
Sbjct: 182 MGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGK 241

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A   + +M  +G+ P+  TY++L+       ++  A+ +   MS +GV+ ++V+++ 
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301

Query: 141 LIGIFSRNGQLDRALMYFREMK-SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           LI  + +  ++D A    R M+  A LVPD   Y ++I+GYCR G + +A+++ DEML  
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 361

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   ++   N+++NG C+   + EA+ +   M++  + PD Y++ TL+ G+C++G+ ++A
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            NL D M Q+ I+P ++TYNTL+ G C+VG  + A ++W  M+ R ++P+ + Y  L++G
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 481

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
              M +   A  LW +++ +G   + ++ NT+I G C+ G   +A+E   KM   G  PD
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y TLI+G+ +  N+ +AF +   ME + + P +  YN +++G  +  R+ +   +L 
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 601

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            M  +GL P+  TY  LI+G   +  L +AF  + EM + G 
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643



 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 166/518 (32%), Positives = 271/518 (52%), Gaps = 33/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNA CKD K+D A  F+ +ME  GV P+ VTY++LIN Y   G +E A  ++  MS KG
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           +   V TY  LI G CK+ + D A++VL  M +   L PD   Y  L+   CR   + +A
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM R G+  ++   ++LI  + + G++  A      M    L PD+  Y  +++G
Sbjct: 352 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 411

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YCR G   EA  + D+ML++G    V+TYNT+L GLCR     +A  +++ M++RGV PD
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPD 471

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              ++TL+ G  K  N   A  L+  +  +      +T+NT+I G CK+G+M +A +++ 
Sbjct: 472 EVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M     SP+ I+Y  LI+GYC   +V +AF++   M  + I P++   N++I G  +S 
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 591

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +  + L++M   G+ P+ ++Y  LI+G+ +E  +DKAF+   +M   GL  ++I  +
Sbjct: 592 RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 651

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRS---------------------------- 451
            +++G  R GR+ ++ L++ +M++ G  PD                              
Sbjct: 652 TMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLL 711

Query: 452 ----TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                Y   I G      + +A RF   +  +GFVPD+
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749



 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 268/485 (55%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K+ +  +A     +M + G+ PD    + ++NA+C++G ++EA   +  M   G
Sbjct: 197 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 256

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TY+SLING    G  + AK VL  M + G+S +  TY  L+   C++  M EAE
Sbjct: 257 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 316

Query: 121 EIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++   M     + PD  ++  LI  + R G++D A+    EM   GL  +  +   +ING
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 376

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G + EA  +   M++     D  +YNT+L+G CR    +EA +L ++ML+ G+ P 
Sbjct: 377 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 436

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL+ G C+ G  + AL ++ +M ++ + PD V Y+TL+DG  K+   E A+ LW 
Sbjct: 437 VLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWK 496

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           D+++R  + + I++  +I+G C MG + EA  ++ +M   G  P  ++  T+I GYC++ 
Sbjct: 497 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 556

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  +A +    M  E + P    YN+LI+G  +   + +   L+++M  +GL P+++TY 
Sbjct: 557 NVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYG 616

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+C++G +  +    + M E GL+ +    +T+++G      + EA     +M+  
Sbjct: 617 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676

Query: 480 GFVPD 484
           GF PD
Sbjct: 677 GFFPD 681



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 261/479 (54%), Gaps = 3/479 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+    D A      M ++GV PD V Y+TL++   +    E A  L   +  +G
Sbjct: 443 LLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG 502

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 T+N++I+GLCK G+   A+E+ D+M  +G SPD  TY TL+   C+  N+ +A 
Sbjct: 503 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAF 562

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M R  ++P I  +++LI    ++ +L        EM   GL P+ V Y  +I+G+
Sbjct: 563 KVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGW 622

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A     EM E G   +++  +T+++GL R   + EA+ L  +M++ G FPD 
Sbjct: 623 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F   +    +   + K  +  D   +  + P+ + YN  I G CK G+++ A + ++ 
Sbjct: 683 ECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 739

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +   P+  +Y  LI+GY + G+V EAFRL  EM+ +G+ P +V+ N +I G C+S +
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     K+  +G+ P+ ++YNTLI+G+ +  NMD AF L  KM  +G+ P V+TY+ 
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++ G C+ G +  S  +L +MI+ G++     Y TL+ G++    +++  + +D M  R
Sbjct: 860 LINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIR 918



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 231/425 (54%), Gaps = 3/425 (0%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P VF  + ++    +KG    A  V D M + G  P   + N+LL    +      A
Sbjct: 153 AFSPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 210

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ +M R G+ PD+   S ++  F ++G++D A  + ++M++ G+ P+ V Y  +ING
Sbjct: 211 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING 270

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-P 238
           Y   G V  A  +   M EKG   +VVTY  ++ G C+   + EA+ +   M E     P
Sbjct: 271 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 330

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +  LI G+C+ G ++ A+ L D M +  +K ++   N+LI+G+CK GE+ +A  + 
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+   + P+  SY  L++GYC  GH +EAF L  +M+ +GI+PT+++ NT++KG CR 
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A +    M+  GV PD + Y+TL++G  + EN + A  L   +  +G     IT+
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N +++G C+ G+M ++E I  +M + G +PD  TY TLI+G+   +N+ +AF+    M +
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 479 RGFVP 483
               P
Sbjct: 571 EPISP 575



 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 236/421 (56%), Gaps = 3/421 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K+  A+    +M+  G  PD +TY TLI+ YC+   + +AF++  +M  + 
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 572

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +  YNSLI+GL K  R     ++L EM   GL+P+  TY  L+   C++  + +A 
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + EM+  G++ +I+  ST++    R G++D A +  ++M   G  PD+  +   +   
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---LKSD 689

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R   + +     DE  +   + + + YN  + GLC+   + +A   F+ +  +G  PD 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ TLIHG+   GN+++A  L D M ++ + P+IVTYN LI+G CK   +++A +L+  
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 809

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + PN ++Y  LI+GYC +G++  AF+L  +M+ +GI P++V+ + +I G C+ GD
Sbjct: 810 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             ++ + L++M+  GVD   I Y TL+ G++R   M K   L   M  + L    I++  
Sbjct: 870 IERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQ 929

Query: 421 I 421
           +
Sbjct: 930 V 930



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 196/404 (48%), Gaps = 55/404 (13%)

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN-------------------VLY 173
           P++ S+  L+ I SR    D    Y  ++       D                     ++
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVF 159

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            +I+  Y   G    AL + D M + G +  + + N++LN L +      A  ++ +M+ 
Sbjct: 160 DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIR 219

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+ PD +  + +++  CKDG +++A      M    ++P+IVTY++LI+G+  +G++E 
Sbjct: 220 VGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEA 279

Query: 294 ANKLWADMISRKISPNYISYGIL------------------------------------I 317
           A  +   M  + +S N ++Y +L                                    I
Sbjct: 280 AKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLI 339

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +GYC  G + +A RL  EM+  G+K  L  CN++I GYC+ G+  +A+  +++MV   + 
Sbjct: 340 DGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLK 399

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PDS SYNTL++G+ RE +  +AF L  KM  +G+ P V+TYN +L G CR G   D+  I
Sbjct: 400 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 459

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
              M+++G+ PD   Y+TL++G     N + A     ++L RGF
Sbjct: 460 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  309 bits (791), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 168/519 (32%), Positives = 285/519 (54%), Gaps = 35/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCK  K+++A     +ME+ G+ P+ VTYN +IN  C+ G L+ AF+L   M+ KG
Sbjct: 226 VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG 285

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TY +LINGL K    D+   +LDEM+  G +P+   +N L+   C+  N+  A 
Sbjct: 286 VQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGAL 345

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV------------- 167
           +I   M  + + P  V+  +L+  F ++ Q++ A     E+ S+GL              
Sbjct: 346 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 405

Query: 168 ----------------------PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                                 P ++L T+++ G C++G  LEA ++   +LEKG     
Sbjct: 406 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 465

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT N +++GLC A  L EA  +  EMLERG+  D  T+  LI G C +G +     L + 
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 525

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           MT++ I+PDI TYN L+ G C VG+++ A KLW +  +  +  N  +YGI++ GYC    
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +   L+ E++ K ++   +  N IIK +C++G+ + A + L  M S+G+ P+  +Y++
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G      ++ A  L+ +M  +G VP+V+ Y  ++ G+C+ G+M  +E     MI   
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 705

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++P++ TYT +I+G+    N+++A     +M + G VPD
Sbjct: 706 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 744



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 245/494 (49%), Gaps = 35/494 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K +  D     L EM   G  P+ V +N LI+ YC+ G +E A ++ + M  K 
Sbjct: 296 LINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 355

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS----------------------- 97
           + P   T  SL+ G CK  + + A+  L+E+L  GLS                       
Sbjct: 356 ITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAF 415

Query: 98  ------------PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                       P       L+   C+     EA E++  +  +G     V+ + LI   
Sbjct: 416 RFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGL 475

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+L  A    +EM   GL  D + Y  +I G+C  G V    ++R+EM ++G   D+
Sbjct: 476 CGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDI 535

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYN +L GLC    L +A  L++E    G+  + +T+  ++ G+CK   +    NLF+ 
Sbjct: 536 YTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNE 595

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +  K ++ + + YN +I   C+ G +  A +L  +M S+ I PN  +Y  LI+G C++G 
Sbjct: 596 LLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGL 655

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A  L  EM  +G  P +V    +I GYC+ G    A+    +M+S  + P+  +Y  
Sbjct: 656 VEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 715

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+G+ +  NM+KA  L+ KM+  G+VPDV+TYNV+  GFC+   M ++  +  +M  +G
Sbjct: 716 MIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEG 775

Query: 446 LNPDRSTYTTLING 459
           L  D  TYTTL++G
Sbjct: 776 LPVDEITYTTLVHG 789



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 218/427 (51%), Gaps = 4/427 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++   CK  +I+ A+  L E+   G  ++PD     ++++  C++     AF+    M  
Sbjct: 366 LMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY--SVVHWLCKKFRYHSAFRFTKMMLS 423

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +  +P       L+ GLCK G+   A E+   +L+ G      T N L+   C    + E
Sbjct: 424 RNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPE 483

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  I  EM  RG+  D ++++ LI  F   G+++       EM   G+ PD   Y  ++ 
Sbjct: 484 ASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLR 543

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C  G + +A+K+ DE    G + ++ TY  ++ G C+A  + + ++LFNE+L + +  
Sbjct: 544 GLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMEL 603

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +   +  +I  HC++GN+  AL L + M  K I P+  TY++LI G C +G +E A  L 
Sbjct: 604 NSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLI 663

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M      PN + Y  LI GYC +G +  A   W EM+   I P   +   +I GYC+ 
Sbjct: 664 DEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKL 723

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  KA+  L KM   G+ PD ++YN L NGF +  +MD AF +  +M  +GL  D ITY
Sbjct: 724 GNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITY 783

Query: 419 NVILTGF 425
             ++ G+
Sbjct: 784 TTLVHGW 790



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 238/468 (50%), Gaps = 5/468 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           + +KG +P   T N  +++  +    E+  ++   MS +G  P VF++ ++IN LCK G+
Sbjct: 177 LARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMS-EGACPDVFSFTNVINALCKGGK 235

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A E+  +M ++G+SP+  TYN ++   C+   +  A E+  +M+ +GV P++ ++  
Sbjct: 236 MENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA 295

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    +    D+      EM  AG  P+ V++  +I+GYC+ G +  ALK++D M+ K 
Sbjct: 296 LINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 355

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG--VFPDFYTFTTLIHGHCKDGNMNK 258
                VT  +++ G C++  +  A++   E+L  G  + PD     +++H  CK    + 
Sbjct: 356 ITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD--NCYSVVHWLCKKFRYHS 413

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A     +M  ++ +P  +    L+ G CK G+  +A +LW  ++ +    + ++   LI+
Sbjct: 414 AFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIH 473

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G C  G + EA R+  EM+ +G+    ++ N +I G+C  G          +M   G+ P
Sbjct: 474 GLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQP 533

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D  +YN L+ G      +D A  L  + +  GL+ ++ TY +++ G+C+  R+ D E + 
Sbjct: 534 DIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLF 593

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             ++ K +  +   Y  +I  H    N+  A +  + M  +G +P+ A
Sbjct: 594 NELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCA 641



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 211/432 (48%), Gaps = 38/432 (8%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A +V   + + G  P   T N  L    +     +  E+F  MS  G  PD+ SF+ +I 
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVIN 228

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
              + G+++ A+  F +M+  G+ P+ V Y  IING C+NG +  A +++++M  KG   
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 288

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           ++ TY  ++NGL +     + + + +EM+  G  P+   F  LI G+CK GN+  AL + 
Sbjct: 289 NLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIK 348

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD----------------------- 300
           D+M  K+I P  VT  +L+ GFCK  ++E A     +                       
Sbjct: 349 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 408

Query: 301 ------------MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
                       M+SR   P+ +   +L+ G C  G   EA  LW+ ++ KG   + V+ 
Sbjct: 409 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 468

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I G C +G   +A   + +M+  G+  D I+YN LI GF  E  ++  F L  +M  
Sbjct: 469 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 528

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQNNLK 467
           +G+ PD+ TYN +L G C  G++ D+ + LW   +  GL  +  TY  ++ G+   N ++
Sbjct: 529 RGIQPDIYTYNFLLRGLCNVGKLDDA-IKLWDEFKASGLISNIHTYGIMMEGYCKANRIE 587

Query: 468 EAFRFHDEMLQR 479
           +     +E+L +
Sbjct: 588 DVENLFNELLSK 599



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 189/373 (50%), Gaps = 1/373 (0%)

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           R    S A ++F  ++R+G  P + + +  +    +  + ++    FR M S G  PD  
Sbjct: 163 RNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVM-SEGACPDVF 221

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            +T +IN  C+ G +  A+++  +M + G   +VVTYN I+NGLC+   L  A +L  +M
Sbjct: 222 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKM 281

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
             +GV P+  T+  LI+G  K    +K  ++ D M      P++V +N LIDG+CK+G +
Sbjct: 282 TVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNI 341

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           E A K+   MIS+ I+P  ++   L+ G+C    +  A     E++  G+     +C ++
Sbjct: 342 EGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSV 401

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           +   C+      A  F   M+S    P  +    L+ G  ++    +A  L  ++  +G 
Sbjct: 402 VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS 461

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
               +T N ++ G C  G++ ++  I+  M+E+GL  DR TY  LI G  ++  ++  FR
Sbjct: 462 PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFR 521

Query: 472 FHDEMLQRGFVPD 484
             +EM +RG  PD
Sbjct: 522 LREEMTKRGIQPD 534


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  309 bits (791), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 159/482 (32%), Positives = 277/482 (57%), Gaps = 20/482 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    ID A     +ME KG  P+ VTYNTLI+ YC+   +++ F+L+ SM+ KG
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P + +YN +INGLC++GR      VL EM + G S D  TYNTL+   C++ N  +A 
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM R G+ P ++++++LI    + G ++RA+ +  +M+  GL P+   YT +++G+
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G++ EA ++  EM + G    VVTYN ++NG C    + +A  +  +M E+G+ PD 
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++T++ G C+  ++++AL +   M +K IKPD +TY++LI GFC+    ++A  L+ +
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P+  +Y  LIN YC  G + +A +L  EMV KG+ P +V+ + +I G  +   
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L K+  E   P  ++Y+TLI      EN        S +E + +V        
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLI------EN-------CSNIEFKSVVS------- 610

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC +G M +++ +   M+ K   PD + Y  +I+GH    ++++A+  + EM++ G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670

Query: 481 FV 482
           F+
Sbjct: 671 FL 672



 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 154/461 (33%), Positives = 256/461 (55%), Gaps = 1/461 (0%)

Query: 27  YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR-CDRAK 85
           Y  +  ++ ++ +Y R   +++A  +++     G  PGV +YN++++   +  R    A+
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            V  EML+  +SP+  TYN L+   C   N+  A  +F +M  +G  P++V+++TLI  +
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  ++D      R M   GL P+ + Y ++ING CR G + E   +  EM  +G  +D 
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYNT++ G C+     +A  +  EML  G+ P   T+T+LIH  CK GNMN+A+   D 
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  + + P+  TY TL+DGF + G M +A ++  +M     SP+ ++Y  LING+C  G 
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +A  +  +M  KG+ P +VS +T++ G+CRS D  +A     +MV +G+ PD+I+Y++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI GF  +    +A  L  +M   GL PD  TY  ++  +C +G +  +  +   M+EKG
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + PD  TY+ LING   Q+  +EA R   ++     VP D 
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 591



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 180/352 (51%), Gaps = 50/352 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++++CK   ++ A  FL +M  +G+ P+  TY TL++ + ++G++ EA++++  M+  G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+LING C  G+ + A  VL++M + GLSPD  +Y+T+L   CR  ++ EA 
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G+ PD +++S+LI  F    +   A   + EM   GL PD   YT +IN Y
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL------------------------- 215
           C  G + +AL++ +EM+EKG + DVVTY+ ++NGL                         
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590

Query: 216 -------------------------CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
                                    C   M+TEAD +F  ML +   PD   +  +IHGH
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           C+ G++ KA  L+  M +       VT   L+    K G++ + N +   ++
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 15/186 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLI---------------NAYCREGF 45
           ++N L K  +   AK  L ++  +   P  VTY+TLI                 +C +G 
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           + EA Q+  SM GK  KP    YN +I+G C+ G   +A  +  EM++ G    T T   
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+    ++  ++E   +   + R     +      L+ I  R G +D  L    EM   G
Sbjct: 681 LVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740

Query: 166 LVPDNV 171
            +P+ +
Sbjct: 741 FLPNGI 746



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 59/137 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    +  A      M  K   PD   YN +I+ +CR G + +A+ L   M   G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 T  +L+  L K+G+ +    V+  +L+     +      L+  + R+ NM    
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730

Query: 121 EIFCEMSRRGVAPDIVS 137
           ++  EM++ G  P+ +S
Sbjct: 731 DVLAEMAKDGFLPNGIS 747


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 169/519 (32%), Positives = 285/519 (54%), Gaps = 35/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCK  K+++A     +ME+ G+ P+ VTYN +IN  C+ G L+ AF+L   M+ KG
Sbjct: 249 VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG 308

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TY +LINGL K    D+   VLDEM+  G +P+   +N L+   C+  N+  A 
Sbjct: 309 VQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGAL 368

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV------------- 167
           +I   M  + + P  V+  +L+  F ++ Q++ A     E+ S+GL              
Sbjct: 369 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 428

Query: 168 ----------------------PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                                 P ++L T+++ G C++G  LEA ++   +LEKG     
Sbjct: 429 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 488

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT N +++GLC A  L EA  +  EMLERG+  D  T+  LI G C +G +     L + 
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 548

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           MT++ I+PDI TYN L+ G C VG+++ A KLW +  +  +  N  +YGI++ GYC    
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +   L+ E++ K ++   +  N IIK +C++G+ + A + L  M S+G+ P+  +Y++
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G      ++ A  L+ +M  +G VP+V+ Y  ++ G+C+ G+M  +E     MI   
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 728

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++P++ TYT +I+G+    N+++A     +M + G VPD
Sbjct: 729 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 767



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 245/494 (49%), Gaps = 35/494 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K +  D     L EM   G  P+ V +N LI+ YC+ G +E A ++ + M  K 
Sbjct: 319 LINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 378

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS----------------------- 97
           + P   T  SL+ G CK  + + A+  L+E+L  GLS                       
Sbjct: 379 ITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAF 438

Query: 98  ------------PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                       P       L+   C+     EA E++  +  +G     V+ + LI   
Sbjct: 439 RFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGL 498

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+L  A    +EM   GL  D + Y  +I G+C  G V    ++R+EM ++G   D+
Sbjct: 499 CGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDI 558

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYN +L GLC    L +A  L++E    G+  + +T+  ++ G+CK   +    NLF+ 
Sbjct: 559 YTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNE 618

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +  K ++ + + YN +I   C+ G +  A +L  +M S+ I PN  +Y  LI+G C++G 
Sbjct: 619 LLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGL 678

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A  L  EM  +G  P +V    +I GYC+ G    A+    +M+S  + P+  +Y  
Sbjct: 679 VEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 738

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+G+ +  NM+KA  L+ KM+  G+VPDV+TYNV+  GFC+   M ++  +  +M  +G
Sbjct: 739 MIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEG 798

Query: 446 LNPDRSTYTTLING 459
           L  D  TYTTL++G
Sbjct: 799 LPVDEITYTTLVHG 812



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 218/427 (51%), Gaps = 4/427 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++   CK  +I+ A+  L E+   G  ++PD     ++++  C++     AF+    M  
Sbjct: 389 LMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY--SVVHWLCKKFRYHSAFRFTKMMLS 446

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +  +P       L+ GLCK G+   A E+   +L+ G      T N L+   C    + E
Sbjct: 447 RNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPE 506

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  I  EM  RG+  D ++++ LI  F   G+++       EM   G+ PD   Y  ++ 
Sbjct: 507 ASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLR 566

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C  G + +A+K+ DE    G + ++ TY  ++ G C+A  + + ++LFNE+L + +  
Sbjct: 567 GLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMEL 626

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +   +  +I  HC++GN+  AL L + M  K I P+  TY++LI G C +G +E A  L 
Sbjct: 627 NSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLI 686

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M      PN + Y  LI GYC +G +  A   W EM+   I P   +   +I GYC+ 
Sbjct: 687 DEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKL 746

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  KA+  L KM   G+ PD ++YN L NGF +  +MD AF +  +M  +GL  D ITY
Sbjct: 747 GNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITY 806

Query: 419 NVILTGF 425
             ++ G+
Sbjct: 807 TTLVHGW 813



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 212/432 (49%), Gaps = 38/432 (8%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A +V   + + G  P   T N LL    +     +  E+F  MS  G  PD+ SF+ +I 
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVIN 251

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
              + G+++ A+  F +M+  G+ P+ V Y  IING C+NG +  A +++++M  KG   
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           ++ TY  ++NGL +     + + + +EM+  G  P+   F  LI G+CK GN+  AL + 
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 371

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD----------------------- 300
           D+M  K+I P  VT  +L+ GFCK  ++E A     +                       
Sbjct: 372 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 431

Query: 301 ------------MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
                       M+SR   P+ +   +L+ G C  G   EA  LW+ ++ KG   + V+ 
Sbjct: 432 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 491

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I G C +G   +A   + +M+  G+  D I+YN LI GF  E  ++  F L  +M  
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQNNLK 467
           +G+ PD+ TYN +L G C  G++ D+ + LW   +  GL  +  TY  ++ G+   N ++
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDA-IKLWDEFKASGLISNIHTYGIMMEGYCKANRIE 610

Query: 468 EAFRFHDEMLQR 479
           +     +E+L +
Sbjct: 611 DVENLFNELLSK 622



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 190/373 (50%), Gaps = 1/373 (0%)

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           R    S A ++F  ++R+G  P + + + L+    +  + ++    FR M S G  PD  
Sbjct: 186 RNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGACPDVF 244

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            +T +IN  C+ G +  A+++  +M + G   +VVTYN I+NGLC+   L  A +L  +M
Sbjct: 245 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKM 304

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
             +GV P+  T+  LI+G  K    +K  ++ D M      P++V +N LIDG+CK+G +
Sbjct: 305 TVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNI 364

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           E A K+   MIS+ I+P  ++   L+ G+C    +  A     E++  G+     +C ++
Sbjct: 365 EGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSV 424

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           +   C+      A  F   M+S    P  +    L+ G  ++    +A  L  ++  +G 
Sbjct: 425 VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS 484

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
               +T N ++ G C  G++ ++  I+  M+E+GL  DR TY  LI G  ++  ++  FR
Sbjct: 485 PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFR 544

Query: 472 FHDEMLQRGFVPD 484
             +EM +RG  PD
Sbjct: 545 LREEMTKRGIQPD 557


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 173/524 (33%), Positives = 280/524 (53%), Gaps = 39/524 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C+   +  A+  L  M+++G+ P   TYNTL++AY R G++++A  ++ +M+  G
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL-SPDTATYNTLLVESCRK-ENMSE 118
            +P ++TYN L  GLC+ G+ D A ++ DEM Q+G+ SPD  TYNTL V++C K +  S+
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTL-VDACFKCQRSSD 368

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  EM  +GV   +V+ + ++    R GQL+ AL     M   GL PD + Y  +I+
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
             C+ G V +A  + DEM+  G  MD  T NT+L  LC+ K   EA++L     +RG  P
Sbjct: 429 ASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVP 488

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  ++ T++  + K+     AL L+D M ++ + P I TYNTLI G   +G++ +A    
Sbjct: 489 DEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKL 548

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +++   + P+  +Y I+I+ YC  G + +AF+   +MV    KP +V+CNT++ G C  
Sbjct: 549 NELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLY 608

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA +     V +G   D I+YNTLI    ++ ++D A    + ME +GL PDV TY
Sbjct: 609 GRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTY 668

Query: 419 NVILTGFCRQGRMHDSELILWRM---------------------IEKGLNP--------- 448
           NV+L+     GR  +++ +L ++                     +E G +P         
Sbjct: 669 NVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESV 728

Query: 449 ------DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
                 D+ +Y   I        LKEA    DEM+Q+G   D++
Sbjct: 729 GNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNS 772



 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 156/460 (33%), Positives = 245/460 (53%), Gaps = 1/460 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           ++P+  T+N L++ +C +G L +A   ++ M G GL P   TYN+L+N  C+KG    A+
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L  M + G+ P  ATYNTL+    R   + +A ++   M+  G  PD+ +++ L    
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324

Query: 146 SRNGQLDRALMYFREMKSAGLV-PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
            + G++D A     EM+  G+V PD V Y  +++   +     +AL + +EM EKG    
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSS 384

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +VT+N I+ GLCR   L EA      M E G+ PD  T+ TLI   CK GN+ KA  L D
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMD 444

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +  +K D  T NTL+   CK    E+A +L      R   P+ +SYG ++  Y    
Sbjct: 445 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEY 504

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               A  LW EM+ + + P++ + NT+IKG    G  ++A + L++++  G+ PD  +YN
Sbjct: 505 KPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYN 564

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            +I+ + +E +++KAF   +KM      PDV+T N ++ G C  GR+  +  +    +EK
Sbjct: 565 IIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEK 624

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G   D  TY TLI      N++  A RF  +M  RG  PD
Sbjct: 625 GKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPD 664



 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 159/460 (34%), Positives = 248/460 (53%), Gaps = 1/460 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C    +  A   L +M+  G+ PD VTYNTL+NA+CR+G L EA  L+  M  +G
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEG 274

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TYN+L++   + G   +A +V++ M   G  PD  TYN L    C+   + EA 
Sbjct: 275 IVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 334

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++  EM + G V+PD+V+++TL+    +  +   AL    EM+  G+    V + II+ G
Sbjct: 335 KLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKG 394

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR G + EAL   + M E+G   DV+TYNT+++  C+A  + +A  L +EM+  G+  D
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD 454

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T  TL++  CK+    +A  L     Q+   PD V+Y T++  + K  + E A  LW 
Sbjct: 455 TFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWD 514

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +MI RK++P+  +Y  LI G  +MG +TEA     E++  G+ P   + N II  YC+ G
Sbjct: 515 EMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEG 574

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D  KA +F +KMV     PD ++ NTL+NG      ++KA  L      +G   DVITYN
Sbjct: 575 DLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYN 634

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            ++   C+   +  +      M  +GL PD  TY  L++ 
Sbjct: 635 TLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSA 674



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 229/495 (46%), Gaps = 70/495 (14%)

Query: 27  YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG-LKPGVFTYNSLINGLCKKGRCDRAK 85
           +P +   +  ++ Y R      A QL++S   +G ++P +   N++++ L +        
Sbjct: 133 FPTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALAR-------- 184

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                      SP T+   +L              + F  +    + P+  +F+ L+   
Sbjct: 185 -----------SPSTSPQASL--------------DAFHSLIALRLHPNHYTFNLLVHTH 219

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G L  AL    +M+  GL PD V Y  ++N +CR G + EA  +   M ++G V   
Sbjct: 220 CSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTR 279

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYNT+++   R   + +A D+   M   G  PD +T+  L  G C+ G +++A  L D 
Sbjct: 280 ATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 339

Query: 266 MTQKSI-KPDIVTYNTLID-----------------------------------GFCKVG 289
           M Q  I  PD+VTYNTL+D                                   G C+ G
Sbjct: 340 MEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREG 399

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           ++E+A      M    ++P+ I+Y  LI+  C  G+V +AF L  EMV  G+K    + N
Sbjct: 400 QLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLN 459

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           T++   C+     +A+E L      G  PD +SY T++  + +E   + A  L  +M  +
Sbjct: 460 TLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKR 519

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            L P + TYN ++ G    G++ ++   L  ++E GL PD +TY  +I+ +  + +L++A
Sbjct: 520 KLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKA 579

Query: 470 FRFHDEMLQRGFVPD 484
           F+FH++M++  F PD
Sbjct: 580 FQFHNKMVENSFKPD 594



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 36/143 (25%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCKD+ +D+A  F  +ME +G+ PD  TYN L++A    G   EA ++++ ++  G
Sbjct: 636 LIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695

Query: 61  LKPGVF------------------------------------TYNSLINGLCKKGRCDRA 84
              G F                                    +YN  I  LC  G+   A
Sbjct: 696 KLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEA 755

Query: 85  KEVLDEMLQMGLSPDTATYNTLL 107
           K VLDEM+Q G+S D +TY TL+
Sbjct: 756 KAVLDEMMQKGMSVDNSTYITLM 778



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG-VDPDSISYNTLINGFVR------EEN 395
           PT    +  +  Y R      A + L      G V P   + N +++   R      + +
Sbjct: 134 PTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQAS 193

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +D   +L++      L P+  T+N+++   C +G + D+   L +M   GL+PD  TY T
Sbjct: 194 LDAFHSLIALR----LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNT 249

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L+N H  +  L EA      M + G VP  A
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRA 280


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 170/490 (34%), Positives = 268/490 (54%), Gaps = 32/490 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC   ++DSA   L +M + G  P++V Y TLI+A C    + EA QL+  M    
Sbjct: 211 VMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMC 270

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T+N +I+GLC+ GR   A ++LD ML  G S D  TY  L+   CR   + EA 
Sbjct: 271 CEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEAR 330

Query: 121 EI--------------------------------FCEMSRRGVAPDIVSFSTLIGIFSRN 148
            +                                +  M   G  PD  +F+ +I    + 
Sbjct: 331 ALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKK 390

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L  AL    EM +    P+ + YTI+ING+C+ G + EA ++ + M  KG  ++ V Y
Sbjct: 391 GYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGY 450

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N ++  LC+   + EA  LF EM  +G  PD YTF +LI+G CK+  M +AL+L+  M  
Sbjct: 451 NCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFL 510

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           + +  + VTYNTL+  F     +++A KL  +M+ R    + I+Y  LI   C  G V +
Sbjct: 511 EGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
              L+ EM+GKGI PT++SCN +I G CR+G  + A +FL  M+  G+ PD ++YN+LIN
Sbjct: 571 GLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLIN 630

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  +  ++ +A  L +K++++G+ PD ITYN +++  C +G  +D+ L+L++ ++ G  P
Sbjct: 631 GLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIP 690

Query: 449 DRSTYTTLIN 458
           +  T++ LIN
Sbjct: 691 NEVTWSILIN 700



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/394 (36%), Positives = 223/394 (56%), Gaps = 5/394 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLM-NSMSGK 59
           +++ LC+  ++D A+  L ++      P+TV YNTLI+ Y   G  EEA  L+ N+M   
Sbjct: 316 LMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIA 371

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P  +T+N +I+GL KKG    A E+L+EM+     P+  TY  L+   C++  + EA
Sbjct: 372 GYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEA 431

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            EI   MS +G++ + V ++ LI    ++G ++ AL  F EM   G  PD   +  +ING
Sbjct: 432 AEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLING 491

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+N  + EAL +  +M  +G + + VTYNT+++       + +A  L +EML RG   D
Sbjct: 492 LCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLD 551

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  LI   CK G + K L LF+ M  K I P I++ N LI G C+ G++  A K   
Sbjct: 552 NITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQ 611

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DMI R ++P+ ++Y  LING C MGHV EA  L+ ++  +GI+P  ++ NT+I  +C  G
Sbjct: 612 DMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEG 671

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
             + A   L K V  G  P+ ++++ LIN  V++
Sbjct: 672 MFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 232/432 (53%), Gaps = 6/432 (1%)

Query: 51  QLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-GLSPDTATYNTLLVE 109
           +L+  M  +GL      +  ++    K G   +A  +L +M  +    P   +YN +L  
Sbjct: 120 KLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDI 179

Query: 110 SCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD 169
               +    A  +F +M  RGV+P + +F  ++       ++D A    R+M   G VP+
Sbjct: 180 LVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPN 239

Query: 170 NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
           +V+Y  +I+  C N  V EAL++ ++M    C  DV T+N +++GLCRA  + EA  L +
Sbjct: 240 SVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLD 299

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
            ML RG   D  T+  L+HG C+ G +++A  L +    K   P+ V YNTLI G+   G
Sbjct: 300 RMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLN----KIPNPNTVLYNTLISGYVASG 355

Query: 290 EMEKA-NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
             E+A + L+ +M+     P+  ++ I+I+G    G++  A  L  EMV K  +P +++ 
Sbjct: 356 RFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITY 415

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I G+C+ G   +A E ++ M ++G+  +++ YN LI    ++ N+++A  L  +M  
Sbjct: 416 TILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSG 475

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G  PD+ T+N ++ G C+  +M ++  +   M  +G+  +  TY TL++  + ++++++
Sbjct: 476 KGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQ 535

Query: 469 AFRFHDEMLQRG 480
           AF+  DEML RG
Sbjct: 536 AFKLVDEMLFRG 547



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 1/205 (0%)

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG-K 339
           LID    VG+ +   KL   M    +      + +++  Y   G   +A RL  +M G  
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
              PT  S N ++           A      M+S GV P   ++  ++        +D A
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            +L+  M   G VP+ + Y  ++   C   R+ ++  +L  M      PD  T+  +I+G
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
                 + EA +  D ML RGF  D
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTD 309


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 164/485 (33%), Positives = 271/485 (55%), Gaps = 4/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEM-EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   CK  K+D A+  L  M E+  + PD   Y  LI+ YCR G +++A +L++ M   
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 361

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GLK  +F  NSLING CK+G    A+ V+  M+   L PD+ +YNTLL   CR+ + SEA
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  +M + G+ P +++++TL+    R G  D AL  +  M   G+ PD V Y+ +++G
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDG 481

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             +      A  +  ++L +G     +T+NT+++GLC+   + EA+++F++M + G  PD
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G+CK  N+ +A  +   M ++ I P I  YN+LI G  K   + +   L  
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLT 601

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R ++PN ++YG LI+G+C  G + +AF  ++EM   G+   ++ C+T++ G  R G
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 661

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+  + KMV  G  PD   +   +   +R   + K    + +     L+P+ I YN
Sbjct: 662 RIDEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYN 718

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           + + G C+ G++ D+      +  KG  PD  TY TLI+G+ +  N+ EAFR  DEML+R
Sbjct: 719 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778

Query: 480 GFVPD 484
           G VP+
Sbjct: 779 GLVPN 783



 Score =  301 bits (770), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 162/512 (31%), Positives = 279/512 (54%), Gaps = 32/512 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +I  A+  +  M    + PD+ +YNTL++ YCREG   EAF L + M  +G
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 432

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYN+L+ GLC+ G  D A ++   M++ G++PD   Y+TLL    + EN   A 
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGAS 492

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ ++  RG     ++F+T+I    + G++  A   F +MK  G  PD + Y  +I+GY
Sbjct: 493 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 552

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +A K++  M  +     +  YN++++GL +++ L E  DL  EM  RG+ P+ 
Sbjct: 553 CKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNI 612

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK+G ++KA + +  MT+  +  +I+  +T++ G  ++G +++AN L   
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672

Query: 301 MIS--------------------RKIS------------PNYISYGILINGYCSMGHVTE 328
           M+                     +KI+            PN I Y I I G C  G V +
Sbjct: 673 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A R +  +  KG  P   +  T+I GY  +G+  +A     +M+  G+ P+ ++YN LIN
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 792

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  + EN+D+A  L  K+  +GL P+V+TYN ++ G+C+ G M  +  +  +MIE+G++P
Sbjct: 793 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 852

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
              TY+ LING     +++ + +  ++M++ G
Sbjct: 853 SVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884



 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 260/462 (56%), Gaps = 1/462 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G  P   + N+L+N   + G    A  +   M   G+ P VF  + ++N  CK G+
Sbjct: 182 MGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGK 241

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A   + +M  +G+ P+  TY++L+       ++  A+ +   MS +GV+ ++V+++ 
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301

Query: 141 LIGIFSRNGQLDRALMYFREMK-SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           LI  + +  ++D A    R M+  A LVPD   Y ++I+GYCR G + +A+++ DEML  
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 361

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   ++   N+++NG C+   + EA+ +   M++  + PD Y++ TL+ G+C++G+ ++A
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            NL D M Q+ I+P ++TYNTL+ G C+VG  + A ++W  M+   ++P+ + Y  L++G
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDG 481

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
              M +   A  LW +++ +G   + ++ NT+I G C+ G   +A+E   KM   G  PD
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y TLI+G+ +  N+ +AF +   ME + + P +  YN +++G  +  R+ +   +L 
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLT 601

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            M  +GL P+  TY  LI+G   +  L +AF  + EM + G 
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 267/485 (55%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K+ +  +A     +M + G+ PD    + ++NA+C++G ++EA   +  M   G
Sbjct: 197 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 256

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TY+SLING    G  + AK VL  M + G+S +  TY  L+   C++  M EAE
Sbjct: 257 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 316

Query: 121 EIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++   M     + PD  ++  LI  + R G++D A+    EM   GL  +  +   +ING
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 376

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G + EA  +   M++     D  +YNT+L+G CR    +EA +L ++ML+ G+ P 
Sbjct: 377 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 436

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL+ G C+ G  + AL ++ +M +  + PD V Y+TL+DG  K+   E A+ LW 
Sbjct: 437 VLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWK 496

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           D+++R  + + I++  +I+G C MG + EA  ++ +M   G  P  ++  T+I GYC++ 
Sbjct: 497 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 556

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  +A +    M  E + P    YN+LI+G  +   + +   L+++M  +GL P+++TY 
Sbjct: 557 NVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYG 616

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+C++G +  +    + M E GL+ +    +T+++G      + EA     +M+  
Sbjct: 617 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676

Query: 480 GFVPD 484
           GF PD
Sbjct: 677 GFFPD 681



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 165/518 (31%), Positives = 270/518 (52%), Gaps = 33/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNA CKD K+D A  F+ +ME  GV P+ VTY++LIN Y   G +E A  ++  MS KG
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           +   V TY  LI G CK+ + D A++VL  M +   L PD   Y  L+   CR   + +A
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM R G+  ++   ++LI  + + G++  A      M    L PD+  Y  +++G
Sbjct: 352 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 411

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YCR G   EA  + D+ML++G    V+TYNT+L GLCR     +A  +++ M++ GV PD
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPD 471

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              ++TL+ G  K  N   A  L+  +  +      +T+NT+I G CK+G+M +A +++ 
Sbjct: 472 EVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M     SP+ I+Y  LI+GYC   +V +AF++   M  + I P++   N++I G  +S 
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSR 591

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +  + L++M   G+ P+ ++Y  LI+G+ +E  +DKAF+   +M   GL  ++I  +
Sbjct: 592 RLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 651

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRS---------------------------- 451
            +++G  R GR+ ++ L++ +M++ G  PD                              
Sbjct: 652 TMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLL 711

Query: 452 ----TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                Y   I G      + +A RF   +  +GFVPD+
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749



 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 253/468 (54%), Gaps = 3/468 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+    D A      M + GV PD V Y+TL++   +    E A  L   +  +G
Sbjct: 443 LLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG 502

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 T+N++I+GLCK G+   A+E+ D+M  +G SPD  TY TL+   C+  N+ +A 
Sbjct: 503 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAF 562

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M R  ++P I  +++LI    ++ +L        EM   GL P+ V Y  +I+G+
Sbjct: 563 KVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGW 622

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A     EM E G   +++  +T+++GL R   + EA+ L  +M++ G FPD 
Sbjct: 623 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F   +    +   + K  +  D   +  + P+ + YN  I G CK G+++ A + ++ 
Sbjct: 683 ECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 739

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +   P+  +Y  LI+GY + G+V EAFRL  EM+ +G+ P +V+ N +I G C+S +
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     K+  +G+ P+ ++YNTLI+G+ +  NMD AF L  KM  +G+ P V+TY+ 
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           ++ G C+ G +  S  +L +MI+ G++     Y TL+ G    +N  E
Sbjct: 860 LINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNE 907



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 231/425 (54%), Gaps = 3/425 (0%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P VF  + ++    +KG    A  V D M + G  P   + N+LL    +      A
Sbjct: 153 AFSPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 210

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ +M R G+ PD+   S ++  F ++G++D A  + ++M++ G+ P+ V Y  +ING
Sbjct: 211 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING 270

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-P 238
           Y   G V  A  +   M EKG   +VVTY  ++ G C+   + EA+ +   M E     P
Sbjct: 271 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 330

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +  LI G+C+ G ++ A+ L D M +  +K ++   N+LI+G+CK GE+ +A  + 
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+   + P+  SY  L++GYC  GH +EAF L  +M+ +GI+PT+++ NT++KG CR 
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A +    M+  GV PD + Y+TL++G  + EN + A  L   +  +G     IT+
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N +++G C+ G+M ++E I  +M + G +PD  TY TLI+G+   +N+ +AF+    M +
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 479 RGFVP 483
               P
Sbjct: 571 EXISP 575



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 234/416 (56%), Gaps = 7/416 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K+  A+    +M+  G  PD +TY TLI+ YC+   + +AF++  +M  + 
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREX 572

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +  YNSLI+GL K  R     ++L EM   GL+P+  TY  L+   C++  + +A 
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + EM+  G++ +I+  ST++    R G++D A +  ++M   G  PD+  +   +   
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---LKSD 689

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R   + +     DE  +   + + + YN  + GLC+   + +A   F+ +  +G  PD 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ TLIHG+   GN+++A  L D M ++ + P+IVTYN LI+G CK   +++A +L+  
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 809

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + PN ++Y  LI+GYC +G++  AF+L  +M+ +GI P++V+ + +I G C+ GD
Sbjct: 810 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN---MDKAFALVSKMENQGLVP 413
             ++ + L++M+  GVD   I Y TL+ G  +  N   M K  AL   M N  L+P
Sbjct: 870 IERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNM-NCFLLP 924



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 195/404 (48%), Gaps = 55/404 (13%)

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN-------------------VLY 173
           P++ S+  L+ I SR    D    Y  ++       D                     ++
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVF 159

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            +I+  Y   G    AL + D M + G +  + + N++LN L +      A  ++ +M+ 
Sbjct: 160 DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIR 219

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+ PD +  + +++  CKDG +++A      M    ++P+IVTY++LI+G+  +G++E 
Sbjct: 220 VGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEA 279

Query: 294 ANKLWADMISRKISPNYISYGIL------------------------------------I 317
           A  +   M  + +S N ++Y +L                                    I
Sbjct: 280 AKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLI 339

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +GYC  G + +A RL  EM+  G+K  L  CN++I GYC+ G+  +A+  +++MV   + 
Sbjct: 340 DGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLK 399

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PDS SYNTL++G+ RE +  +AF L  KM  +G+ P V+TYN +L G CR G   D+  I
Sbjct: 400 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 459

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
              M++ G+ PD   Y+TL++G     N + A     ++L RGF
Sbjct: 460 WHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  308 bits (790), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 158/477 (33%), Positives = 278/477 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  K+  A   L +M  +G +PD V+Y  +++ YCR G L++  +L++ + GKG
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKG 307

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  + YN++I  LCK G    A+++L  M + G+ PD   Y T++   C+  N+S A 
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAAC 367

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM R+ + PDIV+++++I    ++G++  A   F EM   GL PD V YT +I+GY
Sbjct: 368 KLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGY 427

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + ++M++KG   +VVTY  + +GLC+   +  A++L +EM  +G+ P+ 
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNV 487

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+ T+++G CK GN+ + + L + M      PD +TY TL+D +CK+GEM KA++L   
Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRI 547

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+++++ P  +++ +L+NG+C  G + +  RL   M+ KGI P   + N+++K YC   +
Sbjct: 548 MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNN 607

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    M   GV PDS +YN LI G  +  NM +A+ L  +M  +G      TY+ 
Sbjct: 608 MRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDA 667

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           ++ GF ++ +  ++  +   M + GL  ++  Y   ++ +  + N +      DE +
Sbjct: 668 LIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFM 724



 Score =  297 bits (761), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 157/479 (32%), Positives = 276/479 (57%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C    I  A     E  + GV  +TV+ N +++  C+ G + EA  L+  M+ +G  P V
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDV 277

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            +Y  +++G C+ G  D+  +++DE+   GL PD   YN +++  C+   + EAE++   
Sbjct: 278 VSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRG 337

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M + GV PD V ++T+I  F + G +  A   F EM+   +VPD V YT +I+G C++G 
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           ++EA +M +EML KG   D VTY  +++G C+A  + EA  + N+M+++G+ P+  T+T 
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L  G CK+G ++ A  L   M++K ++P++ TYNT+++G CK+G +E+  KL  +M    
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ I+Y  L++ YC MG + +A  L   M+ K ++PTLV+ N ++ G+C SG     +
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGE 577

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
             +  M+ +G+ P++ ++N+L+  +  + NM     +   M ++G++PD  TYN+++ G 
Sbjct: 578 RLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGH 637

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+   M ++  +   M+EKG +   +TY  LI G   +    EA +  +EM + G V +
Sbjct: 638 CKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAE 696



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 149/464 (32%), Positives = 251/464 (54%), Gaps = 10/464 (2%)

Query: 29  DTVTYNTLINAYCREGFLE--EAFQLMNSM-----SGKGLKPGVFTYNSLINGLCKKGRC 81
           D  T   L+  +C +  ++  ++F L   M        G  P VF  +     L + G  
Sbjct: 130 DIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVF--DLYFQVLVENGFV 187

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVE-SCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
             A+++  ++L+ G+     + N  L   SC  E +  A ++F E    GV  + VS + 
Sbjct: 188 LEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNI 247

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++    + G++  A     +M   G  PD V Y ++++GYCR G + + LK+ DE+  KG
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKG 307

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D   YN I+  LC+   + EA+ L   M + GVFPD   +TT+I G CK GN++ A 
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAAC 367

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            LFD M +K I PDIVTY ++I G CK G+M +A +++ +M+ + + P+ ++Y  LI+GY
Sbjct: 368 KLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGY 427

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + EAF +  +MV KG+ P +V+   +  G C++G+   A+E L +M  +G+ P+ 
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNV 487

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YNT++NG  +  N+++   L+ +M+  G  PD ITY  ++  +C+ G M  +  +L  
Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRI 547

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M+ K L P   T+  L+NG      L++  R  + ML++G +P+
Sbjct: 548 MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  308 bits (790), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 160/484 (33%), Positives = 270/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D        M+   +  D  +YN LIN +CR   L  A  ++  M   G
Sbjct: 86  LLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 145

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M++MG  PDT T+NTL+         SEA 
Sbjct: 146 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 205

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +RG  PD+V++  ++    + G +D AL   ++M+   +  D V+Y  II+G 
Sbjct: 206 ALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 265

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A  + ++M  KG   DV TYN++++ LC     ++A  L + M+ER + P+ 
Sbjct: 266 CKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNV 325

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ LI    K+G + +A  L+D M ++SI PDI TY++LI+GFC    +++A  ++  
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS+   PN ++Y  LI G+C    V E   L+ EM  +G+    V+ NT+I+G  ++GD
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   KMVS+GV PD I+Y+ L++G  +   ++KA  +   ++   + PD+ TYN+
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ P+   YTT+I+G   +   +EA     EM + G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565

Query: 481 FVPD 484
            +PD
Sbjct: 566 TLPD 569



 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 261/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++  A   L +M + G  PD VT ++L+N YC    + +A  L++ M   G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP   T+N+LI+GL    +   A  ++D+M+Q G  PD  TY  ++   C++ ++  A 
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +  +  D+V ++T+I    +   +D A   F +M++ G+ PD   Y  +I+  
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++   M+E+    +VVT++ +++   +   L EA+ L++EM++R + PD 
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI+G C    +++A ++F++M  K   P++VTYNTLI GFCK   +E+  +L+ +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  N ++Y  LI G    G    A +++ +MV  G+ P +++ + ++ G C+ G 
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA      +    ++PD  +YN +I G  +   ++  + L   +  +G+ P+VI Y  
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++GFCR+G   +++ +   M E G  PD   Y TLI   +   +   +     EM   G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 600

Query: 481 FVPD 484
           FV D
Sbjct: 601 FVGD 604



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 148/436 (33%), Positives = 240/436 (55%), Gaps = 1/436 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L   +K   A   + +M Q+G  PD VTY  ++N  C+ G ++ A  L+  M    
Sbjct: 191 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK 250

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V  YN++I+GLCK    D A  + ++M   G+ PD  TYN+L+   C     S+A 
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  R + P++V+FS LI  F + G+L  A   + EM    + PD   Y+ +ING+
Sbjct: 311 RLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA  M + M+ K C  +VVTYNT++ G C+AK + E  +LF EM +RG+  + 
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G  + G+ + A  +F  M    + PDI+TY+ L+DG CK G++EKA  ++  
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+ P+  +Y I+I G C  G V + + L+  +  KG+KP ++   T+I G+CR G 
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +AD    +M  +G  PDS  YNTLI   +R+ +   +  L+ +M + G V D  T ++
Sbjct: 551 KEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 610

Query: 421 ILTGFCRQGRMHDSEL 436
           ++      GR+  S L
Sbjct: 611 VIN-MLHDGRLEKSYL 625


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  308 bits (790), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 165/479 (34%), Positives = 268/479 (55%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +D+ ID A+     M + G+ P  VTYNT+++++C++G ++EA QL+  M   G  P   
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDV 238

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TYN L+NGL   G  ++AKE++ +ML++GL     TY+ L+   C K  + EA  +  EM
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
             RG  P +V+++T++    + G++  A      M +  L+PD V Y  +I GY R G +
Sbjct: 299 LSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 358

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            EA  +  E+  +     VVTYNT+++GLCR   L  A  L +EM++ G  PD +TFTT 
Sbjct: 359 GEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTF 418

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           + G CK GN+  A  LFD M  + ++PD   Y T I G  K+G+  KA  +  +M++R  
Sbjct: 419 VRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 478

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I+Y + I+G   +G++ EA  L  +M+  G+ P  V+  +II  +  +G   KA  
Sbjct: 479 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARA 538

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              +M+S+G+ P  ++Y  LI+ +     +  A     +M  +G+ P+VITYN ++ G C
Sbjct: 539 LFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLC 598

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +  +M  +      M  KG++P++ TYT LIN + +  + +EA R + +ML R   PD 
Sbjct: 599 KVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 657



 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 155/480 (32%), Positives = 273/480 (56%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+++ CK   +  A   L +M+  G  P+ VTYN L+N     G +E+A +L+  M   G
Sbjct: 208 MLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLG 267

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  V+TY+ LI G C+KG+ + A  + +EML  G  P   TYNT++   C+   +S+A 
Sbjct: 268 LEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDAR 327

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M  + + PD+VS++TLI  ++R G +  A + F E++   L P  V Y  +I+G 
Sbjct: 328 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGL 387

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A++++DEM++ G   DV T+ T + G C+   L  A +LF+EML RG+ PD 
Sbjct: 388 CRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDR 447

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + T I G  K G+ +KA  + + M  +   PD++TYN  IDG  K+G +++A++L   
Sbjct: 448 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 507

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P++++Y  +I+ +   GH+ +A  L+ EM+ KGI P++V+   +I  Y   G 
Sbjct: 508 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGR 567

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M  +GV P+ I+YN LING  +   MD+A+   ++M+ +G+ P+  TY +
Sbjct: 568 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTI 627

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C  G   ++  +   M+++ + PD  T+ +L+  H++++      R  + ++  G
Sbjct: 628 LINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLK-HLNKDYKLHVVRHLENVIAAG 686



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 264/494 (53%), Gaps = 16/494 (3%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           ++  + + + F     Q G     ++Y+ +++   R G +  A+ +M  +    ++ GV 
Sbjct: 58  RNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVI 117

Query: 67  TYNS---------------LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL-VES 110
              S               L+    KK   ++   V  +M+  GL PD    N +L +  
Sbjct: 118 DVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLR 177

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
            R  N+  A E++  M   G+ P +V+++T++  F + G +  AL    +M++ G  P++
Sbjct: 178 DRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPND 237

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           V Y +++NG   +G + +A ++  +ML  G  + V TY+ ++ G C    + EA  L  E
Sbjct: 238 VTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEE 297

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           ML RG  P   T+ T+++G CK G ++ A  L D+M  K++ PD+V+YNTLI G+ ++G 
Sbjct: 298 MLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGN 357

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           + +A  L+A++  R ++P+ ++Y  LI+G C +G +  A RL  EM+  G  P + +  T
Sbjct: 358 IGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTT 417

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
            ++G+C+ G+   A E   +M++ G+ PD  +Y T I G ++  +  KAF +  +M  +G
Sbjct: 418 FVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARG 477

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
             PD+ITYNV + G  + G + ++  ++ +M+  GL PD  TYT++I+ H+   +L++A 
Sbjct: 478 FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKAR 537

Query: 471 RFHDEMLQRGFVPD 484
               EML +G  P 
Sbjct: 538 ALFLEMLSKGIFPS 551



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 25/181 (13%)

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS--------EGVD 377
           V   F  W E    G K + +S + I+    R+G    A   + K+VS        + V 
Sbjct: 63  VALRFFRWAER-QTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVS 121

Query: 378 PDSIS-------YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
              +S        + L+  +V++  ++K   +  KM ++GL+PDV   N +L    R  R
Sbjct: 122 SSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVL----RLLR 177

Query: 431 MHDSELILWR-----MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             D+ + + R     M+E G+ P   TY T+++    +  ++EA +   +M   G  P+D
Sbjct: 178 DRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPND 237

Query: 486 A 486
            
Sbjct: 238 V 238


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  308 bits (789), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 150/389 (38%), Positives = 238/389 (61%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK+ K+  AK F+  ME  GV P+ VTYNT+I+ +C  G  + A  +  +M  KG
Sbjct: 222 MINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P  +TYNS I+GLCK+GR + A  ++ +ML+ GL P+  TYN L+   C K ++ +A 
Sbjct: 282 LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAY 341

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM  +G+   +V+++  I      G++  A    +EM+  G++PD V + I+INGY
Sbjct: 342 AYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGY 401

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G    A  + DEM+ KG    +VTY +++  L +   + EAD LF+++ + G+ PD 
Sbjct: 402 CRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDI 461

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  LI GHC +GN+++A  L   M    + PD +TYNTL+ G+C+ G++E+A +L  +
Sbjct: 462 IVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDE 521

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P++ISY  LI+GY   G + +AFR+  EM+  G  PT+++ N +I+G C++ +
Sbjct: 522 MKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQE 581

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLING 389
              A+E L +MVS+G+ PD  +Y ++I  
Sbjct: 582 GEHAEELLKEMVSKGITPDDSTYLSIIEA 610



 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 154/467 (32%), Positives = 264/467 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V A C+  K + A      +++KG  P+  T N +++ + +    + A+ L   M    
Sbjct: 152 LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMN 211

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  ++T+N +IN LCK+G+  +AKE +  M  +G+ P+  TYNT++   C +     A 
Sbjct: 212 IRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRAR 271

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  M  +G+ PD  ++++ I    + G+L+ A     +M   GLVP+ V Y  +I+GY
Sbjct: 272 VIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGY 331

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A   RDEM+ KG +  +VTYN  ++ L     + +AD++  EM E+G+ PD 
Sbjct: 332 CNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDA 391

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T   LI+G+C+ G+  +A  L D M  K I+P +VTY +LI    K   M++A+ L++ 
Sbjct: 392 VTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSK 451

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+ I +  LI+G+C+ G++  AF+L  EM    + P  ++ NT+++GYCR G 
Sbjct: 452 IQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGK 511

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + L +M   G+ PD ISYNTLI+G+ +  +M  AF +  +M   G  P ++TYN 
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNA 571

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           ++ G C+      +E +L  M+ KG+ PD STY ++I    + ++L+
Sbjct: 572 LIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/419 (34%), Positives = 232/419 (55%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
              ++ L+   C+  + + A E    + + G  P+  T N +L    +      A  ++ 
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM R  +   + +F+ +I +  + G+L +A  +   M++ G+ P+ V Y  II+G+C  G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
               A  +   M +KG   D  TYN+ ++GLC+   L EA  L  +MLE G+ P+  T+ 
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI G+C  G+++KA    D M  K I   +VTYN  I      G M  A+ +  +M  +
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + P+ +++ ILINGYC  G    AF L  EMVGKGI+PTLV+  ++I    +     +A
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           D   SK+  EG+ PD I +N LI+G     N+D+AF L+ +M+N  ++PD ITYN ++ G
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +CR+G++ ++  +L  M  +G+ PD  +Y TLI+G+  + ++K+AFR  DEM+  GF P
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDP 564



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 245/457 (53%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           T+ ++ L+ AYC      EA +    +  KG  P + T N +++   K  R   A  +  
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           EM +M +     T+N ++   C++  + +A+E    M   GV P++V+++T+I      G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           +  RA + F+ MK  GL PD   Y   I+G C+ G + EA  +  +MLE G V + VTYN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +++G C    L +A    +EM+ +G+     T+   IH    +G M  A N+   M +K
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            + PD VT+N LI+G+C+ G+ ++A  L  +M+ + I P  ++Y  LI        + EA
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L+ ++  +G+ P ++  N +I G+C +G+  +A + L +M +  V PD I+YNTL+ G
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           + RE  +++A  L+ +M+ +G+ PD I+YN +++G+ ++G M D+  +   M+  G +P 
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             TY  LI G       + A     EM+ +G  PDD+
Sbjct: 566 ILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDS 602



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 130/260 (50%), Gaps = 35/260 (13%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++AL  + ++  A   + EM +KG+ PD VT+N LIN YCR G  + AF L++ M GKG+
Sbjct: 363 IHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGI 422

Query: 62  KPGVFTY-----------------------------------NSLINGLCKKGRCDRAKE 86
           +P + TY                                   N+LI+G C  G  DRA +
Sbjct: 423 QPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQ 482

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           +L EM  M + PD  TYNTL+   CR+  + EA ++  EM RRG+ PD +S++TLI  +S
Sbjct: 483 LLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYS 542

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + G +  A     EM + G  P  + Y  +I G C+N     A ++  EM+ KG   D  
Sbjct: 543 KRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDS 602

Query: 207 TYNTILNGLCRAKMLTEADD 226
           TY +I+  +     L   DD
Sbjct: 603 TYLSIIEAMETVDDLEGNDD 622



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 71/143 (49%), Gaps = 1/143 (0%)

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
           K TL+  + +++ YC     ++A E    +  +G  P+  + N +++ F++      A+ 
Sbjct: 144 KTTLI-FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWV 202

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           L ++M    +   + T+N+++   C++G++  ++  +  M   G+ P+  TY T+I+GH 
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
            +   + A      M  +G  PD
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPD 285


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 156/455 (34%), Positives = 261/455 (57%), Gaps = 3/455 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C+   +  A+  L  M+++G+ P   TYNTL++AY R G++++A  ++ +M+  G
Sbjct: 251 LLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG 310

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL-SPDTATYNTLLVESCRK-ENMSE 118
            +P ++TYN L  GLC+ G+ D A ++ DEM  + + SPD  TYNT LV++C K +  S+
Sbjct: 311 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNT-LVDACFKYQRSSD 369

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  EM  +GV   +V+ + ++    R GQL+ AL   + M   GL PD + Y  +I+
Sbjct: 370 ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLID 429

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            YC+   V +A  + DEM+  G  MD  T NT+L  LC+ K   EA++L     +RG  P
Sbjct: 430 AYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVP 489

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  ++ T++  + K+     AL L+D M+++ + P I TYNTLI G C +G++ +A    
Sbjct: 490 DEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKL 549

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +++ + + P+  +Y I+I+ YC  G + +AF+   +M+    KP +V+CNT++ G C  
Sbjct: 550 NELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLH 609

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA +       +G   D I+YNTLI    ++ ++D A    + ME +GL PD  TY
Sbjct: 610 GKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTY 669

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           NV+L+     GR  +++ +L ++ E G   +R +Y
Sbjct: 670 NVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY 704



 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 157/470 (33%), Positives = 248/470 (52%), Gaps = 1/470 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C    +  A   L  M+  G+ PD VTYNTL+ A+CR+G L EA  L+  M  +G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TYN+L++   + G   +A  V++ M   G  PD  TYN L    C+   + EA 
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 335

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++  EM     V+PD+V+++TL+    +  +   AL    EM+  G+    V + I++ G
Sbjct: 336 KLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKG 395

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR G + EAL     M E+G   DV+TYNT+++  C+A+ + +A  L +EM+  G+  D
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T  TL++  CK+    +A  L     Q+   PD V+Y T++  + K  + E A  LW 
Sbjct: 456 TFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWD 515

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  RK++P+  +Y  LI G C++G +TEA     E++ KG+ P   + N II  YC+ G
Sbjct: 516 EMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEG 575

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D  KA +F +KM+     PD ++ NTL+NG      ++KA  L      +G   DVITYN
Sbjct: 576 DLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYN 635

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            ++   C+ G +  +      M  +GL PD  TY  +++        +EA
Sbjct: 636 TLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEA 685



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/460 (32%), Positives = 243/460 (52%), Gaps = 1/460 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           ++P+  T+N L++ +C +G L +A   +++M G GL P V TYN+L+   C+KG    A+
Sbjct: 206 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEAR 265

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L  M + G++P  ATYNTL+    R   + +A  +   M+  G  PD+ +++ L    
Sbjct: 266 TLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGL 325

Query: 146 SRNGQLDRALMYFREMKSAGLV-PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
            + G++D A     EM+   +V PD V Y  +++   +     +AL + +EM +KG    
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +VT+N ++ GLCR   L EA      M E G+ PD  T+ TLI  +CK  N+ KA  L D
Sbjct: 386 LVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMD 445

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +  +K D  T NTL+   CK    E+A +L      R   P+ +SYG ++  Y    
Sbjct: 446 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKEN 505

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               A  LW EM  + + P++ + NT+IKG C  G  ++A + L++++ +G+ PD  +YN
Sbjct: 506 KPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYN 565

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            +I+ + +E +++KAF   +KM      PDV+T N ++ G C  G++  +  +     EK
Sbjct: 566 IIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEK 625

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G   D  TY TLI       ++  A  F  +M  RG  PD
Sbjct: 626 GKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPD 665



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 75/154 (48%)

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           ++  ++   + P   + N ++  +C  G  + A   LS M   G+ PD ++YNTL+    
Sbjct: 197 VFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHC 256

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           R+  + +A  L+++M+ +G+ P   TYN +++ + R G +  +  ++  M   G  PD  
Sbjct: 257 RKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLW 316

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           TY  L  G      + EAF+  DEM     V  D
Sbjct: 317 TYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPD 350



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 36/143 (25%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM--SG 58
           ++ ALCKD  +D+A  F  +ME +G+ PD  TYN +++A    G  EEA  +++ +  SG
Sbjct: 637 LIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696

Query: 59  K-------------------GLKPGVFT---------------YNSLINGLCKKGRCDRA 84
           K                   G  P V +               YN  +  LC  G+   A
Sbjct: 697 KLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEA 756

Query: 85  KEVLDEMLQMGLSPDTATYNTLL 107
           K VLDEM+Q G+S D++TY TL+
Sbjct: 757 KAVLDEMMQKGMSVDSSTYITLM 779



 Score = 45.1 bits (105), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 2/113 (1%)

Query: 376 VDPDSISYNTLINGFVREENMDKAFAL--VSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
           V P   + N +++   R  +     +L     +    L P+  T+N+++   C +G + D
Sbjct: 169 VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLAD 228

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +   L  M   GL+PD  TY TL+  H  +  L EA      M + G  P  A
Sbjct: 229 ALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRA 281


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  308 bits (788), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 274/484 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K +K D       +M+  G+  +  TY+ L+N +CR   L  A  ++  M   G
Sbjct: 87  LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLG 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M++MG  PDT T+NTL+         SEA 
Sbjct: 147 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 206

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  RG  PD+ ++ T++    + G +D AL   ++M+   +  + V+Y  II+G 
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A  + ++M  KG   DV TYN++++ LC     ++A  L ++M+ER + P+ 
Sbjct: 267 CKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNV 326

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF +LI    K+G + +A  LFD M Q+SI P+IVTYN+LI+GFC    +++A +++  
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 386

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+   P+ ++Y  LI G+C    V E   L+ EM  +G+    V+ NT+I+G  ++GD
Sbjct: 387 MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   KMVS+GV PD I+Y+ L++G  +   ++KA  +   ++   + P++ TYN+
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNI 506

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ P+   YTT+I+G   +   +EA     EM + G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 566

Query: 481 FVPD 484
            +PD
Sbjct: 567 TLPD 570



 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/436 (33%), Positives = 243/436 (55%), Gaps = 1/436 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L   +K   A   +  M  +G  PD  TY T++N  C+ G ++ A  L+  M    
Sbjct: 192 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 251

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V  YN++I+GLCK    D A ++ ++M   G+ PD  TYN+L+   C     S+A 
Sbjct: 252 IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDAS 311

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + P++V+F++LI  F++ G+L  A   F EM    + P+ V Y  +ING+
Sbjct: 312 RLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 371

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA ++   M+ K C+ DVVTYNT++ G C+AK + E  +LF EM +RG+  + 
Sbjct: 372 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 431

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G  + G+ + A  +F  M    + PDI+TY+ L+DG CK G++EKA  ++  
Sbjct: 432 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 491

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+ PN  +Y I+I G C  G V + + L+  +  KG+KP ++   T+I G+CR G 
Sbjct: 492 LQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 551

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +AD    +M  +G  PDS  YNTLI   +R+ +   +  L+ +M + G V D  T ++
Sbjct: 552 KEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 611

Query: 421 ILTGFCRQGRMHDSEL 436
           ++      GR+  S L
Sbjct: 612 VIN-MLHDGRLEKSYL 626



 Score =  274 bits (700), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 258/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++  A   L +M + G  PD VT ++L+N YC    + EA  L++ M   G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP   T+N+LI+GL    +   A  ++D M+  G  PD  TY T++   C++ ++  A 
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +  +  ++V ++T+I    +   +D A   F +M++ G+ PD   Y  +I+  
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++  +M+E+    +VVT+N++++   +   L EA+ LF+EM++R + P+ 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI+G C    +++A  +F +M  K   PD+VTYNTLI GFCK   +E+  +L+ +
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFRE 421

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  N ++Y  LI G    G    A +++ +MV  G+ P +++ + ++ G C+ G 
Sbjct: 422 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 481

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA      +    ++P+  +YN +I G  +   ++  + L   +  +G+ P+VI Y  
Sbjct: 482 LEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 541

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++GFCR+G   +++ +   M E G  PD   Y TLI   +   +   +     EM   G
Sbjct: 542 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 601

Query: 481 FVPD 484
           FV D
Sbjct: 602 FVGD 605


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  307 bits (787), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 154/451 (34%), Positives = 258/451 (57%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G+ P  VT+NTL++  C +  + +A +L + M   G +P V TY+++INGLCK G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A ++L +M + G  P+   YNT++   C+   ++EA + F EM + G+ PD+ ++S+
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++  F   G+++ A   F++M    ++P+ V +TI+I+G C+   + EA  + + M EKG
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              DV TYN +++G C    + EA  LFN M  +G  P+  ++  LI+GHCK G +++A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L   M+ KS+ PDI TY+TL+ GFC+VG  ++A +L  +M S  + PN I+Y I+++G 
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  GH+ EAF L   M    I+P +     +I+G C  G    A E  S +  +G+ P  
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++Y  +I+G ++    ++A  L  +M   G +P+  TYNVI+ GF R G   ++  ++  
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           M+ KG + D ST+  L +   S   + +  R
Sbjct: 421 MVGKGFSADSSTFRMLSDLESSDEIISQFMR 451



 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 137/427 (32%), Positives = 246/427 (57%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL+P + T+N+L++GLC K +   A ++ DEM++MG  PD  TY+T++   C+  N + A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  +M  +G  P++V+++T+I    ++  +  A+ +F EM   G+ PD   Y+ I++G
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C  G V EA  +  +M+E+  + + VT+  +++GLC+ +M++EA  +F  M E+G+ PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            YT+  L+ G+C    M++A  LF+IM +K   P++ +YN LI+G CK G +++A  L A
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  + ++P+  +Y  L+ G+C +G   EA  L  EM   G+ P L++ + ++ G C+ G
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A E L  M    ++P+   Y  LI G      ++ A  L S +  +G+ P V+TY 
Sbjct: 305 HLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYT 364

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V+++G  + G  +++  +   M   G  P+  TY  +I G +   +   A R  +EM+ +
Sbjct: 365 VMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK 424

Query: 480 GFVPDDA 486
           GF  D +
Sbjct: 425 GFSADSS 431



 Score =  280 bits (717), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 230/394 (58%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M ++GL P   T+NTLL   C K  + +A ++F EM + G  PD++++ST+I    + G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
              AL   ++M+  G  P+ V Y  II+  C++  V EA+    EM+++G   DV TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           IL+G C    + EA  LF +M+ER V P+  TFT LI G CK   +++A  +F+ MT+K 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           ++PD+ TYN L+DG+C   +M++A KL+  M  +  +PN  SY ILING+C  G + EA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L  EM  K + P + + +T+++G+C+ G   +A E L +M S G+ P+ I+Y+ +++G 
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +  ++D+AF L+  M+   + P++  Y +++ G C  G++  +  +   +  KG+ P  
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TYT +I+G +      EA     EM   G +P+
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPN 394



 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 150/452 (33%), Positives = 242/452 (53%), Gaps = 8/452 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   KI  A     EM + G  PD +TY+T+IN  C+ G    A QL+  M  KG
Sbjct: 16  LLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V  YN++I+ LCK      A +   EM++ G+ PD  TY+++L   C    ++EA 
Sbjct: 76  CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEAT 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  R V P+ V+F+ LI    +   +  A + F  M   GL PD   Y  +++GY
Sbjct: 136 SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGY 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA K+ + M  KGC  +V +YN ++NG C++  + EA  L  EM  + + PD 
Sbjct: 196 CSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDI 255

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++TL+ G C+ G   +A  L   M    + P+++TY+ ++DG CK G +++A +L   
Sbjct: 256 FTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKA 315

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   KI PN   Y ILI G C+ G +  A  L+  +  KGI+PT+V+   +I G  + G 
Sbjct: 316 MQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGL 375

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           +++A E   +M   G  P+S +YN +I GF+R  +   A  L+ +M  +G   D  T+ +
Sbjct: 376 SNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRM 435

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +         +  S+ I+ + + +G + DR T
Sbjct: 436 L-------SDLESSDEIISQFM-RGSSQDRKT 459


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  307 bits (787), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 167/491 (34%), Positives = 272/491 (55%), Gaps = 8/491 (1%)

Query: 1   MVNALCK----DHKIDS--AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMN 54
           M+N  CK    +  ID+  A   L EME+ G  P  VTY+T I   CR G++E A   + 
Sbjct: 255 MMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVR 314

Query: 55  SM-SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK 113
           S+ S  GL   V+ YN++I+GLCKKG  D A +VL+EM   G+SPD  TY+ L+   C++
Sbjct: 315 SLISANGL-VNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQ 373

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
            ++ +   +  EM    + P +VS+S+L     +    D +L  FR++ +AG   D   Y
Sbjct: 374 GDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAY 433

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           +I+I G+C  G +  A K+ +EM+      D   + ++++G C+  +   A + FN MLE
Sbjct: 434 SILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLE 493

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+ P   T   +I  HC++G + +ALNL + M  + I P++ TYN +I+  CK  + E+
Sbjct: 494 GGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSER 553

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A +L+  M+ R + P+ + Y  LI+G+    +  +A  L+  M+  G+ P +V+   +I 
Sbjct: 554 ALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILIN 613

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C      +A     KM   G+ PD ISY ++I GF R  +M KA+AL ++M  +G +P
Sbjct: 614 ILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
            V+TY  ++ G+C+  R+  +++++  M  KG+ PD  TY  LI  H  + NL +A    
Sbjct: 674 TVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEML 733

Query: 474 DEMLQRGFVPD 484
           +EM + G +PD
Sbjct: 734 NEMKENGVLPD 744



 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 140/418 (33%), Positives = 237/418 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++D A   L EM+  G+ PD  TY+ LI+ +C++G +E+   L+  M    
Sbjct: 331 IIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSN 390

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + +Y+SL +GLCKK   D + ++  ++   G   D   Y+ L+   C + ++  A 
Sbjct: 391 MEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAH 450

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM R  +APD  +F +L+  F + G    AL +F  M   G++P      +II+ +
Sbjct: 451 KLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAH 510

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V EAL + +EM  +G   ++ TYN ++N LC+ +    A +LF  ML+R V P  
Sbjct: 511 CREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSV 570

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++TLI G  K  N  KAL L+  M +  + PD+V Y  LI+  C    M +A  L+  
Sbjct: 571 VVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKK 630

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    ++P+ ISY  +I G+C +G + +A+ L+ EM+ +G  PT+V+  +++ GYC+   
Sbjct: 631 MTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNR 690

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
              AD  + +M  +G+ PD ++YN LI    R  N+DKA  ++++M+  G++PD +TY
Sbjct: 691 IDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY 748



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 256/516 (49%), Gaps = 44/516 (8%)

Query: 11  IDSAKMFLCEMEQ-KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           +D+ ++F   +E  K      + ++ LI  +     LE A  +       GL+    + N
Sbjct: 159 LDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCN 218

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE-------EI 122
            L+  L +  R +  + + +EM   G  P+  TY  ++   C K N  EA+       EI
Sbjct: 219 FLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYC-KGNFGEADIDTRQATEI 277

Query: 123 FCEMSRRGVAPDIVSFST--------------------------LIGIFSRN-------- 148
             EM R G +P +V++ST                          L+ ++  N        
Sbjct: 278 LEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCK 337

Query: 149 -GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+LD AL    EMKS G+ PD   Y+I+I+G+C+ G V + L + +EM        +V+
Sbjct: 338 KGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVS 397

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+++ +GLC+ ++   + D+F ++   G   D   ++ LI G C  G+++ A  L + M 
Sbjct: 398 YSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMV 457

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           + ++ PD   + +L+ GFCK+G    A + +  M+   I P+  +  ++I+ +C  G V 
Sbjct: 458 RNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVE 517

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L  EM  +GI P L + N +I   C+   + +A E    M+   V P  + Y+TLI
Sbjct: 518 EALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLI 577

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +GF ++ N  KA  L ++M   G+ PD++ Y +++   C + RM ++  +  +M E G+ 
Sbjct: 578 DGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMT 637

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           PD+ +YT++I G     ++++A+   +EMLQRG +P
Sbjct: 638 PDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 41/366 (11%)

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           S +  A  ++ F  LI +F+ N  L+ A+  F + K  GL                    
Sbjct: 171 SPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGL-------------------- 210

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
                   E+  + C       N +L  L  A        LF EM   G  P+ +T+T +
Sbjct: 211 --------ELSTRSC-------NFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIM 255

Query: 247 IHGHCK------DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++ +CK      D +  +A  + + M +    P +VTY+T I G C+VG +E A      
Sbjct: 256 MNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRS 315

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +IS     N   Y  +I+G C  G + EA ++  EM   GI P + + + +I G+C+ GD
Sbjct: 316 LISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGD 375

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K    + +M    ++P  +SY++L +G  ++   D +  +   +   G   D   Y++
Sbjct: 376 VEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSI 435

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC QG +  +  ++  M+   L PD S + +L++G         A  F + ML+ G
Sbjct: 436 LIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGG 495

Query: 481 FVPDDA 486
            +P  A
Sbjct: 496 ILPSIA 501


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  307 bits (787), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 159/496 (32%), Positives = 266/496 (53%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G++PD VT+ TL++  C E  + EA    + M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T+ +L+NGLC++GR   A  +LD M++ GL P   TY T++   C+K +   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 121 EIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M     + P++V +S +I    ++G+   A   F EM+  G+ PD   Y  +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   +A ++  EMLE+    DVVTYN ++N   +     EA +L++EML RG+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ ++I G CK   ++ A ++F +M  K   PD+ T+ TLIDG+C    ++   +L  
Sbjct: 360 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 419

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R +  N ++Y  LI+G+C +G +  A  L  +M+  G+ P +V+CNT++ G C +G
Sbjct: 420 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 479

Query: 360 DASKADEFLSKMVSE-----------GVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
               A E    M              GV+PD ++YN LI G + E    +A  L  +M +
Sbjct: 480 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 539

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+VPD ITY+ ++ G C+Q R+ ++  +   M  K  +P+  T+ TLING+     + +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 599

Query: 469 AFRFHDEMLQRGFVPD 484
                 EM +RG V D
Sbjct: 600 GLELFCEMGRRGIVAD 615



 Score =  305 bits (781), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 272/496 (54%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC + ++  A  F  +M +    P+ VT+ TL+N  CREG + EA  L++ M   G
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG 214

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
           L+P   TY ++++G+CKKG    A  +L +M ++  + P+   Y+ ++   C+    S+A
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +F EM  +G+ PD+ +++++I  F  +G+   A    +EM    + PD V Y  +IN 
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + + G   EA ++ DEML +G + + +TYN++++G C+   L  A+D+F  M  +G  PD
Sbjct: 335 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 394

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +TFTTLI G+C    ++  + L   M ++ +  + VTYNTLI GFC VG++  A  L  
Sbjct: 395 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 454

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-----------GIKPTLVSC 348
            MIS  + P+ ++   L++G C  G + +A  ++  M              G++P +++ 
Sbjct: 455 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 514

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I G    G   +A+E   +M   G+ PD+I+Y+++I+G  ++  +D+A  +   M +
Sbjct: 515 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 574

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +   P+V+T+N ++ G+C+ GR+ D   +   M  +G+  D   Y TLI G     N+  
Sbjct: 575 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 634

Query: 469 AFRFHDEMLQRGFVPD 484
           A     EM+  G  PD
Sbjct: 635 ALDIFQEMISSGVYPD 650



 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 156/488 (31%), Positives = 265/488 (54%), Gaps = 12/488 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++N LC++ +I  A   L  M + G+ P  +TY T+++  C++G    A  L+  M    
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P V  Y+++I+ LCK GR   A+ +  EM + G+ PD  TYN+++V  C     S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E++  EM  R ++PD+V+++ LI  F + G+   A   + EM   G++P+ + Y  +I+G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 369

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +  A  M   M  KGC  DV T+ T+++G C AK + +  +L +EM  RG+  +
Sbjct: 370 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 429

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIHG C  G++N AL+L   M    + PDIVT NTL+DG C  G+++ A +++ 
Sbjct: 430 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 489

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+ ++Y ILI G  + G   EA  L+ EM  +GI P  ++ 
Sbjct: 490 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G C+     +A +    M S+   P+ +++NTLING+ +   +D    L  +M  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 609

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V D I Y  ++ GF + G ++ +  I   MI  G+ PD  T   ++ G  S+  L+ 
Sbjct: 610 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 669

Query: 469 AFRFHDEM 476
           A    +++
Sbjct: 670 AVAMLEDL 677



 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 142/418 (33%), Positives = 243/418 (58%), Gaps = 11/418 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCKD +   A+    EM++KG++PD  TYN++I  +C  G   +A QL+  M  + 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LIN   K+G+   A E+ DEML  G+ P+T TYN+++   C+++ +  AE
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 380

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M+ +G +PD+ +F+TLI  +    ++D  +    EM   GLV + V Y  +I+G+
Sbjct: 381 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 440

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
           C  G +  AL +  +M+  G   D+VT NT+L+GLC    L +A ++F  M +       
Sbjct: 441 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 500

Query: 235 -----GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                GV PD  T+  LI G   +G   +A  L++ M  + I PD +TY+++IDG CK  
Sbjct: 501 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A +++  M S+  SPN +++  LINGYC  G V +   L+ EM  +GI    +   
Sbjct: 561 RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 620

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           T+I G+ + G+ + A +   +M+S GV PD+I+   ++ GF  +E +++A A++  ++
Sbjct: 621 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 149/470 (31%), Positives = 252/470 (53%), Gaps = 14/470 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  L+    R    +    L   M  K ++  ++++N LI   C   +   A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++ ++GL PD  T+ TLL   C ++ +SEA + F +M      P++V+F+TL+    R
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVV 206
            G++  A+     M   GL P  + Y  I++G C+ G  + AL +  +M E   ++ +VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            Y+ I++ LC+    ++A +LF EM E+G+FPD +T+ ++I G C  G  + A  L   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ I PD+VTYN LI+ F K G+  +A +L+ +M+ R I PN I+Y  +I+G+C    +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  ++Y M  KG  P + +  T+I GYC +       E L +M   G+  ++++YNTL
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-- 444
           I+GF    +++ A  L  +M + G+ PD++T N +L G C  G++ D+ L +++ ++K  
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA-LEMFKAMQKSK 495

Query: 445 ----------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                     G+ PD  TY  LI G +++    EA   ++EM  RG VPD
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 545



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/402 (32%), Positives = 214/402 (53%), Gaps = 1/402 (0%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A ++  +ML+    P    +  L+    R E       ++ +M R+ +  DI SF+ LI 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            F    +L  AL  F ++   GL PD V +T +++G C    V EAL    +M E  C  
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +VVT+ T++NGLCR   + EA  L + M+E G+ P   T+ T++ G CK G+   ALNL 
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 264 DIMTQKS-IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
             M + S I P++V Y+ +ID  CK G    A  L+ +M  + I P+  +Y  +I G+CS
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G  ++A +L  EM+ + I P +V+ N +I  + + G   +A E   +M+  G+ P++I+
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 362

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN++I+GF +++ +D A  +   M  +G  PDV T+  ++ G+C   R+ D   +L  M 
Sbjct: 363 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 422

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +GL  +  TY TLI+G     +L  A     +M+  G  PD
Sbjct: 423 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 464



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 210/372 (56%), Gaps = 1/372 (0%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +A ++F +M R    P +V F  L+G+  R  + D  +  +++M+   +  D   +
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            I+I  +C    +  AL    ++ + G   DVVT+ T+L+GLC    ++EA D F++M E
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
               P+  TFTTL++G C++G + +A+ L D M +  ++P  +TY T++DG CK G+   
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 294 ANKLWADMIS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           A  L   M     I PN + Y  +I+  C  G  ++A  L+ EM  KGI P L + N++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G+C SG  S A++ L +M+   + PD ++YN LIN FV+E    +A  L  +M  +G++
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 357

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+ ITYN ++ GFC+Q R+  +E + + M  KG +PD  T+TTLI+G+     + +    
Sbjct: 358 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 417

Query: 473 HDEMLQRGFVPD 484
             EM +RG V +
Sbjct: 418 LHEMPRRGLVAN 429



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 55/340 (16%)

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  GF  E+LK++                   +G    K L +A DLF++ML     P  
Sbjct: 39  CEAGFGGESLKLQ-------------------SGFHEIKGLEDAIDLFSDMLRSRPLPSV 79

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  L+    +    +  ++L+  M +K I+ DI ++N LI  FC   ++  A   +  
Sbjct: 80  VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGK 139

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+ +++  L++G C    V+EA   +++M     +P +V+  T++ G CR G 
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME------------- 407
             +A   L +M+ +G+ P  I+Y T+++G  ++ +   A  L+ KME             
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 408 -----------------------NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
                                   +G+ PD+ TYN ++ GFC  GR  D+E +L  M+E+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++PD  TY  LIN  V +    EA   +DEML RG +P+
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 164/466 (35%), Positives = 261/466 (56%), Gaps = 5/466 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL K  ++D A   L EM   G  PD  T+NT+I  +CR   + E  +L++ M  KG
Sbjct: 251 LIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKG 310

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY  L++GLCK  R D A+ +L ++      P+   +NTL+    R   ++EA 
Sbjct: 311 FTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEAT 366

Query: 121 E-IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ +M   G  PD+ +FSTL+    + G    AL    +M + G  P+   YTI+I+G
Sbjct: 367 AFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDG 426

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G + EA  +  EML KG  ++ V YN +++ LC+   + EA D+F EM  +G  PD
Sbjct: 427 FCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPD 486

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +TF +LI G C+   M  AL L+  M  + +  + VT+NTLI  F + GE+++A KL  
Sbjct: 487 IFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVN 546

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM+ R    + I+Y  LI   C  G V +   L+ EM+ KG+ P++++CN +I G+C +G
Sbjct: 547 DMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAG 606

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A EF+  M+  G  PD ++YN+LING  +   + +A  L  K++ +G+ PD ITYN
Sbjct: 607 KVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYN 666

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
            ++   CR+G   D+  +L+R +E G  P+  T+  L+     Q+N
Sbjct: 667 TLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSN 712



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/362 (34%), Positives = 206/362 (56%), Gaps = 1/362 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCE-MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +VN   ++ +++ A  F+ + M   G  PD  T++TL+N  C++G    A +L+N M  K
Sbjct: 352 LVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAK 411

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G KP + TY  LI+G CKKG+ + A  +L EML  G S +T  YN L+   C+   + EA
Sbjct: 412 GCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEA 471

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++F EMS +G  PDI +F++LI    R  +++ AL  +R+M   G++ ++V +  +I+ 
Sbjct: 472 LDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHA 531

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + R G + EALK+ ++ML +GC +D +TYN ++  LC+   + +   LF EM+ +G+ P 
Sbjct: 532 FLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPS 591

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T   LI+G C  G ++ AL     M  +   PDIVTYN+LI+G CK G +++A  L+ 
Sbjct: 592 IITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFE 651

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  I P+ I+Y  LI   C  G   +A  L Y  V  G  P  V+ N ++  + +  
Sbjct: 652 KLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQS 711

Query: 360 DA 361
           ++
Sbjct: 712 NS 713



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 205/389 (52%), Gaps = 5/389 (1%)

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
           P   +YN +L         S A  +F +M  +GV+P+  +F  ++       ++D A + 
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
            R+M   G VP++++Y  +I+   +   V EALK+ +EM   GC  DV T+NT++ G CR
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR 292

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              + E   L + M+ +G  P+  T+  L+HG CK   +++A  L      K   P++V 
Sbjct: 293 LNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL----SKVPGPNVVH 348

Query: 278 YNTLIDGFCKVGEMEKANKLWAD-MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           +NTL++GF + G + +A     D MI+    P+  ++  L+NG C  G    A  L  +M
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
             KG KP L +   +I G+C+ G   +A   L +M+++G   +++ YN LI+   +   +
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKI 468

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            +A  +  +M ++G  PD+ T+N ++ G CR   M D+  +   M+ +G+  +  T+ TL
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTL 528

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           I+  + +  ++EA +  ++ML RG   D+
Sbjct: 529 IHAFLRRGEIQEALKLVNDMLFRGCPLDE 557


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  306 bits (784), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 159/451 (35%), Positives = 262/451 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL K   +  A+  L +M+ KG+ P+  TYN L+  YCR G L+EA +++  M+   
Sbjct: 254 ILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNN 313

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V+TYN L+NG C  G+ D A  + DEM +M + PD  TYNTL+    +  + SE  
Sbjct: 314 LLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVY 373

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM ++GV  + V+++ ++    + G +  A     +M+  GL PD V Y  +I  Y
Sbjct: 374 SLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAY 433

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A +M DEM  KG  +D  T NTIL+ LC  K L EA +L     +RG   D 
Sbjct: 434 CKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDE 493

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LI G+ KD   ++ALNL+D M ++ I P  +TYN++I G C+  ++++A     +
Sbjct: 494 VSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNE 553

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P+  +Y I+I+G+C  G+V +AF+   EM+    KP + +CN +++G CR G 
Sbjct: 554 MLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGM 613

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +  + +VS+G D D ++YNT+I+   +E   + A+ L+++ME + L PD  TY V
Sbjct: 614 LEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKV 673

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           I+      GR+ ++E    +M+E G+  D++
Sbjct: 674 IIAALTDAGRIKEAEEFTLKMVESGIVHDQN 704



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/471 (32%), Positives = 253/471 (53%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           A+  L +  + GV P+T ++N LI  YC E  +++A   +N MS  G  P   +YN++++
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
            L K+     A+++L +M   GLSP+  TYN L+   CR   + EA ++   M+R  + P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
            + +++ L+  F  +G++D A     EM+   ++PD V Y  +I+G  +     E   + 
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           +EM +KG   + VTYN IL  +C+   +TEA    ++M E G+ PD  T+ TLI  +CK 
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKA 436

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G M KA  + D MT K +K D  T NT++   C   ++++A  L      R    + +SY
Sbjct: 437 GKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSY 496

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
           GILI GY        A  LW EM  + I P+ ++ N++I G C+S    +A + L++M+ 
Sbjct: 497 GILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLE 556

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+ PD  +YN +I+GF  E N++KAF   ++M      PDV T N++L G CR+G +  
Sbjct: 557 NGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEK 616

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  +   ++ KG + D  TY T+I+    +   + A+    EM  +   PD
Sbjct: 617 ALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPD 667



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/460 (31%), Positives = 242/460 (52%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR---A 84
           P     +T I AY +      A Q+ N M     +P + T N+L+N L +         A
Sbjct: 138 PSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLA 197

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           ++VL + +++G+ P+T ++N L+   C +  + +A +   +MS  G  PD VS++T++  
Sbjct: 198 RQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDA 257

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             +   L  A     +MKS GL P+   Y +++ GYCR G + EA K+ + M     +  
Sbjct: 258 LLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPT 317

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           V TYN ++NG C    + EA  + +EM +  V PD  T+ TLI G  +  + ++  +L +
Sbjct: 318 VWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIE 377

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +K +K + VTYN ++   CK G M +A      M    +SP+ ++Y  LI  YC  G
Sbjct: 378 EMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAG 437

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +AFR+  EM  KG+K    + NTI+   C      +A   L      G   D +SY 
Sbjct: 438 KMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYG 497

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI G+ ++E  D+A  L  +M+ + ++P  ITYN ++ G C+  ++  +   L  M+E 
Sbjct: 498 ILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLEN 557

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL PD +TY  +I+G   + N+++AF+FH+EM++  F PD
Sbjct: 558 GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPD 597



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/453 (32%), Positives = 226/453 (49%), Gaps = 23/453 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN  C D KID A     EME+  V PD VTYNTLI+   +     E + L+  M  KG
Sbjct: 324 LVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKG 383

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K    TYN ++  +CKKG    A   LD+M + GLSPD  TYNTL+   C+   M +A 
Sbjct: 384 VKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAF 443

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+ +G+  D  + +T++       +LD A          G + D V Y I+I GY
Sbjct: 444 RMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGY 503

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++     AL + DEM E+  +   +TYN+++ GLC+++ + +A D  NEMLE G+ PD 
Sbjct: 504 FKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDE 563

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +IHG C +GN+ KA    + M +   KPD+ T N L+ G C+ G +EKA KL+  
Sbjct: 564 TTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNT 623

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++S+    + ++Y  +I+  C  G    A+ L  EM  K + P   +   II     +G 
Sbjct: 624 LVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGR 683

Query: 361 ASKADEFLSKMVSEGV-----------------------DPDSISYNTLINGFVREENMD 397
             +A+EF  KMV  G+                       D  SI+Y+  IN    +    
Sbjct: 684 IKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYK 743

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
            A  L  ++  +G+  +  TY  ++ G  ++ +
Sbjct: 744 DAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRK 776



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 38/180 (21%)

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR--------- 392
           +P+    +T I  Y +      A +  +KM      P+ ++ NTL+N  VR         
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL 196

Query: 393 -----------------------------EENMDKAFALVSKMENQGLVPDVITYNVILT 423
                                        E  +  A   V+KM   G VPD ++YN IL 
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              ++  + ++  +L  M  KGL+P++ TY  L+ G+     LKEA +  + M +   +P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  306 bits (784), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 152/466 (32%), Positives = 256/466 (54%), Gaps = 3/466 (0%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL  M   G  PD +   TLI  +CR G   +A +++  + G G  P V TYN +I+G C
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K G  + A  VLD   +M +SPD  TYNT+L   C    + +A E+   M +R   PD++
Sbjct: 184 KAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++ LI    R+  +  A+    EM+  G  PD V Y +++NG C+ G + EA+K  ++M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
              GC  +V+T+N IL  +C      +A+ L  +ML +G  P   TF  LI+  C+ G +
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            +A+++ + M Q   +P+ ++YN L+ GFCK  +M++A +    M+SR   P+ ++Y  +
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           +   C  G V +A  +  ++  KG  P L++ NT+I G  ++G   KA + L +M ++ +
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD+I+Y++L+ G  RE  +D+A     + E  G+ P+ +T+N I+ G C+  +   +  
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            L  MI +G  P+ ++YT LI G   +   KEA    +E+  +G +
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  285 bits (729), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 245/446 (54%), Gaps = 3/446 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  K   A   L  +E  G  PD +TYN +I+ YC+ G +  A  +++ MS   
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--- 199

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+++  LC  G+  +A EVLD MLQ    PD  TY  L+  +CR   +  A 
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  RG  PD+V+++ L+    + G+LD A+ +  +M S+G  P+ + + II+   
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  ++A K+  +ML KG    VVT+N ++N LCR  +L  A D+  +M + G  P+ 
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  L+HG CK+  M++A+   + M  +   PDIVTYNT++   CK G++E A ++   
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+  SP  I+Y  +I+G    G   +A +L  EM  K +KP  ++ ++++ G  R G 
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +F  +    G+ P+++++N+++ G  +    D+A   +  M N+G  P+  +Y +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           ++ G   +G   ++  +L  +  KGL
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/381 (36%), Positives = 213/381 (55%), Gaps = 3/381 (0%)

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           N  L +  R   + E  +    M   G  PDI+  +TLI  F R G+  +A      ++ 
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
           +G VPD + Y ++I+GYC+ G +  AL + D M       DVVTYNTIL  LC +  L +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A ++ + ML+R  +PD  T+T LI   C+D  +  A+ L D M  +   PD+VTYN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           G CK G +++A K   DM S    PN I++ I++   CS G   +A +L  +M+ KG  P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           ++V+ N +I   CR G   +A + L KM   G  P+S+SYN L++GF +E+ MD+A   +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            +M ++G  PD++TYN +LT  C+ G++ D+  IL ++  KG +P   TY T+I+G    
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
               +A +  DEM  +   PD
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPD 483



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 140/283 (49%), Gaps = 3/283 (1%)

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
            ++ V  N  L  + R   L E       M+  G  PD    TTLI G C+ G   KA  
Sbjct: 99  ALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAK 158

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           + +I+      PD++TYN +I G+CK GE+  A  +   M    +SP+ ++Y  ++   C
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLC 215

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G + +A  +   M+ +   P +++   +I+  CR      A + L +M   G  PD +
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +YN L+NG  +E  +D+A   ++ M + G  P+VIT+N+IL   C  GR  D+E +L  M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + KG +P   T+  LIN    +  L  A    ++M Q G  P+
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 91/167 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ ALCKD K++ A   L ++  KG  P  +TYNT+I+   + G   +A +L++ M  K 
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP   TY+SL+ GL ++G+ D A +   E  +MG+ P+  T+N++++  C+      A 
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
           +    M  RG  P+  S++ LI   +  G    AL    E+ + GL+
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 267/514 (51%), Gaps = 32/514 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A   L +M ++G  P+ VTY  L+ A CR    E+A  +++ M  KG
Sbjct: 149 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG 208

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +ING+C++GR D A+E+L+ +   G  PDT +Y TLL   C  +   + E
Sbjct: 209 CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVE 268

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F EM  +   P+ V+F  LI  F R G ++RA+    +M   G   +  L  I+IN  
Sbjct: 269 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSI 328

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A K+ ++M   GC  D ++Y T+L GLCRA+   +A +L NEM+     P+ 
Sbjct: 329 CKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNE 388

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW-- 298
            TF T I   C+ G + +A+ L + M++      +VTYN L++GFC  G ++ A +L+  
Sbjct: 389 VTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 448

Query: 299 ------------------------------ADMISRKISPNYISYGILINGYCSMGHVTE 328
                                         A+M+     PN +++ +L++ +C  G + E
Sbjct: 449 MPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEE 508

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  +M+  G  P L++ NT++ G  +   +  A E L  +VS+GV PD I+++++I 
Sbjct: 509 AIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 568

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              +E+ +++A  L   +++ G+ P  + YN IL G C++  + ++      M+  G  P
Sbjct: 569 ILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMP 628

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           + STY  LI G   +  LKEA      +  RG +
Sbjct: 629 NESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 243/484 (50%), Gaps = 6/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  +   A   L   E  G   D   YNTL+  YCR G L+ A +L+ SM    
Sbjct: 82  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP--- 138

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TY  LI  LC +GR   A  +LD+ML+ G  P+  TY  LL   CR     +A 
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G  P+IV+++ +I    R G++D A      + S G  PD V YT ++ G 
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +    +  ++  EM+EK C+ + VT++ ++   CR  M+  A  +  +M E G   + 
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                +I+  CK G ++ A  L + M      PD ++Y T++ G C+    + A +L  +
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNE 378

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     PN +++   I   C  G + +A  L  +M   G    +V+ N ++ G+C  G 
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E    M  +   P++I+Y TL+ G    E +D A  LV++M      P+V+T+NV
Sbjct: 439 IDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNV 495

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++ FC++G + ++  ++ +M+E G  P+  TY TL++G     + ++A      ++ +G
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKG 555

Query: 481 FVPD 484
             PD
Sbjct: 556 VSPD 559



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 234/460 (50%), Gaps = 6/460 (1%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G  PD      LI   CR G   +A +++ +  G G    VF YN+L+ G C+ G  D A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           + ++     M ++PD  TY  L+   C +  +++A  +  +M RRG  P++V+++ L+  
Sbjct: 131 RRLIG---SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             RN   ++A+    EM++ G  P+ V Y +IING CR G V +A ++ + +   G   D
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            V+Y T+L GLC +K   + ++LF EM+E+   P+  TF  LI   C+ G + +A+ + +
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            MT+     +    N +I+  CK G ++ A KL  DM S   +P+ ISY  ++ G C   
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
              +A  L  EMV     P  V+ NT I   C+ G   +A   + +M   G     ++YN
Sbjct: 368 RWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYN 427

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L+NGF  + ++D A  L   M  +   P+ ITY  +LTG C   R+  +  ++  M+  
Sbjct: 428 ALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRG 484

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              P+  T+  L++    +  L+EA    ++M++ G  P+
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPN 524



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 145/431 (33%), Positives = 220/431 (51%), Gaps = 7/431 (1%)

Query: 55  SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
           S S  G  P V+    LI  LC++GR   A  VL      G   D   YNTL+   CR  
Sbjct: 66  SGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYG 125

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           ++  A  +   M    VAPD  +++ LI +    G++  AL    +M   G  P+ V YT
Sbjct: 126 HLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYT 182

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           +++   CRN    +A+ + DEM  KGC  ++VTYN I+NG+CR   + +A +L N +   
Sbjct: 183 VLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSY 242

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  PD  ++TTL+ G C     +    LF  M +K+  P+ VT++ LI  FC+ G +E+A
Sbjct: 243 GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 302

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            ++   M     + N     I+IN  C  G V +AF+L  +M   G  P  +S  T++KG
Sbjct: 303 IQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKG 362

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            CR+     A E L++MV     P+ +++NT I    ++  +++A  L+ +M   G    
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V+TYN ++ GFC QG + DS L L+R +     P+  TYTTL+ G  +   L  A     
Sbjct: 423 VVTYNALVNGFCVQGHI-DSALELFRSMP--CKPNTITYTTLLTGLCNAERLDGAAELVA 479

Query: 475 EMLQRGFVPDD 485
           EML RG  P +
Sbjct: 480 EML-RGDCPPN 489


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 163/487 (33%), Positives = 271/487 (55%), Gaps = 5/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +   A  FL  +++  V PD   +N LI+   ++G  ++A +L  +M    
Sbjct: 68  LIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR 127

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG--LSPDTATYNTLLVESCRKENMSE 118
           +KP + TYN++I+GLCK G  ++A+E+L+EM++ G   +PD  TYNTL+    R   + E
Sbjct: 128 VKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIRE 187

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A     +M   G+ PD+++ + L+    ++G ++ AL     MK AG VPD + Y  II+
Sbjct: 188 ACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIH 247

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
             C  G V+EA ++   M    C  D+VT+NT+L+G C+A ML  A ++  EM    + P
Sbjct: 248 ALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP 304

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+T L++G C+ G +  A  L + + ++   PD++ Y +L+DG CK GE+E+A+KL 
Sbjct: 305 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 364

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R      + Y  L++GYC  G+V +A  +  EMV   + P L + N ++ G  + 
Sbjct: 365 KEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKD 424

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  SKA   +S +V+ G  PD ++YNTLI+G  +   + +A  L  +M ++G  P+ +T 
Sbjct: 425 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTL 484

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++ G CR GR+ D+  ++  M  K   P+   YT+LI+G    + + +A    D M  
Sbjct: 485 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRG 544

Query: 479 RGFVPDD 485
           +G   DD
Sbjct: 545 QGVALDD 551



 Score =  304 bits (778), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 156/478 (32%), Positives = 278/478 (58%), Gaps = 6/478 (1%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           H   + K++  ++   G  P+ VT+  LI   C+ G    A + + ++    + P V+ +
Sbjct: 42  HHFRTGKVYK-DLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIF 100

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N LI+GL K G  D+A ++ + M    + P+  TYNT++   C+  N+ +A E+  EM R
Sbjct: 101 NVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIR 160

Query: 129 RG--VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           +G   APDIV+++TLI  F R  ++  A  +  +MK+AG+ PD +   I+++G C++G V
Sbjct: 161 KGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDV 220

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            EAL++ D M   G V DV+TYN+I++ LC A  + EA ++   M      PD  TF TL
Sbjct: 221 EEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTL 277

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           + G CK G + +AL + + M +++I PD++TY  L++G C+VG+++ A  L  +++ +  
Sbjct: 278 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 337

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I+Y  L++G C  G + EA +L  EM  +G +  +V  ++++ GYCR+G+  KA E
Sbjct: 338 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKARE 397

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            L++MVS  + P   +YN ++ G +++ ++ KA +L+S +  +G VPDV+TYN ++ G C
Sbjct: 398 ILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 457

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  R+ ++  +   M  +G  P+  T  +++ G      + +A+    EM ++   P+
Sbjct: 458 KANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 515



 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 158/466 (33%), Positives = 252/466 (54%), Gaps = 5/466 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           +++ LCK   ++ A+  L EM +KG    PD VTYNTLINA+ R   + EA      M  
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKA 197

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G+ P V T N L++G+CK G  + A E+LD M   G  PD  TYN+++   C    + E
Sbjct: 198 AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVE 257

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A EI   MS    +PD+V+F+TL+  F + G L RAL    EM    ++PD + YTI++N
Sbjct: 258 AAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVN 314

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G CR G V  A  + +E++ +G + DV+ Y ++++GLC++  + EA  L  EM  RG   
Sbjct: 315 GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRT 374

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
               +++L+ G+C+ GN++KA  +   M   ++ P + TYN ++ G  K G + KA  L 
Sbjct: 375 GVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI 434

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           +D+++R   P+ ++Y  LI+G C    V EA  L  EM  +G  P  V+  +++ G CR 
Sbjct: 435 SDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRV 494

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A   + +M  +   P+ + Y +LI+G  + + MD A  ++  M  QG+  D   Y
Sbjct: 495 GRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAY 554

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
             ++      GR+ ++  +   M+ +G  PD ST  TL    +S +
Sbjct: 555 RKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNS 600



 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 148/466 (31%), Positives = 252/466 (54%), Gaps = 5/466 (1%)

Query: 22  EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC 81
           EQ G   D  +YN L++   + G      ++   +   G  P + T+  LI G CK G+ 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
            RA E L  + +  ++PD   +N L+    +  N  +A ++F  M    V P+IV+++T+
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 142 IGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           I    ++G L++A     EM  K     PD V Y  +IN + R   + EA   R++M   
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   DV+T N +++G+C+   + EA ++ + M   G  PD  T+ ++IH  C  G + +A
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +   M   S  PD+VT+NTL+DGFCK G + +A ++  +M    I P+ I+Y IL+NG
Sbjct: 259 AEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 315

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G V  AF L  E+V +G  P +++  +++ G C+SG+  +A + + +M   G    
Sbjct: 316 LCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTG 375

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            + Y++L++G+ R  N+ KA  ++++M +  +VP + TYN++L G  + G +  +  ++ 
Sbjct: 376 VVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 435

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            ++ +G  PD  TY TLI+G    N ++EA    DEM  RG  P+D
Sbjct: 436 DLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPND 481



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 185/341 (54%), Gaps = 6/341 (1%)

Query: 147 RNGQLDRALMYFREM-KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           R+ + D A+ +F    +  G   D   Y  +++   ++G      K+  ++L  GC  ++
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT+  ++ G C+A     A +    + E  V PD Y F  LIHG  KDGN ++A+ LF+ 
Sbjct: 63  VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR--KISPNYISYGILINGYCSM 323
           M    +KP+IVTYNT+I G CK G +EKA +L  +MI +  K +P+ ++Y  LIN +   
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             + EA     +M   GI P +++CN ++ G C+ GD  +A E L  M   G  PD I+Y
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N++I+       + +A  ++  M      PD++T+N +L GFC+ G +  +  +L  M  
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + + PD  TYT L+NG      ++ AF   +E++++G++PD
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPD 340


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  305 bits (781), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 160/428 (37%), Positives = 245/428 (57%), Gaps = 2/428 (0%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M   G +P V TYNSLI+GLCK    DRA+E+ + M  +  SP   TYNTLL    R   
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +  A  +F EM  R  + D++SF+ L+    R G+++ AL +FR+M      P+ + Y++
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I+G C+   V +A+++ + M  +GC  DV+TY  +++GLC+   +  A ++  EML+ G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  T+ +L+HG C+   ++ AL L   MT +   P++VTY TLIDG CKVG ++ A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            + ADMI +  +P+ + Y +LING C    V E+  L    V  GIKP +V+ +++I G 
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           CRS    +A   L  + S G  PD I Y+TLI+G  +   +D+AF L   M   G   DV
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           +TY+ ++ G C+ GR+ ++ L+L RM+  G  P   TY +LI G    N+L EA    +E
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418

Query: 476 MLQRGFVP 483
           M +    P
Sbjct: 419 MERSNCAP 426



 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 160/483 (33%), Positives = 268/483 (55%), Gaps = 4/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+++ D A+     M+     P  VTYNTL++   R G LE A  L   M  + 
Sbjct: 16  LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V ++N L+ GLC+ G+ + A E   +M     SP+  TY+ L+   C+   +S+A 
Sbjct: 76  -SHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVLIDGLCKANRVSQAV 133

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M  RG +PD+++++ L+    +  ++  A    REM  AG VP+ V Y  +++G 
Sbjct: 134 ELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGL 193

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   V +AL +  +M  +GC  +VVTY T+++GLC+   + +A  +  +M+++G  PD 
Sbjct: 194 CRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDL 253

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LI+G CK   +++++ L        IKPD+VTY+++I G C+   +++A +L   
Sbjct: 254 MIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLY 313

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + SR   P+ I Y  LI+G C  G V EAF L+  M G G    +V+ +T+I G C++G 
Sbjct: 314 VKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGR 373

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L++MV  G  P +++YN+LI G     ++D+A  LV +ME     P  +TYN+
Sbjct: 374 VDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 433

Query: 421 ILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF-HDEMLQ 478
           ++ G CR  R+  + L  ++ MI+ G+ PD  TY+ L+ G     +L E      D+M+Q
Sbjct: 434 LIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 493

Query: 479 RGF 481
            G+
Sbjct: 494 LGY 496



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 176/324 (54%), Gaps = 2/324 (0%)

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM 220
           M+  G  P+ V Y  +I+G C+N     A ++ + M    C   +VTYNT+L+GL R   
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           L  A  LF EML+R    D  +F  L+ G C+ G +  AL  F  M  +   P+++TY+ 
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDRC-SPNVITYSV 118

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           LIDG CK   + +A +L   M +R  SP+ I+Y IL++G C    V  A+ +  EM+  G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
             P LV+ N+++ G CR+   S A   +  M   G  P+ ++Y TLI+G  +   +  A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
           A+++ M ++G  PD++ YN+++ G C+  ++ +S  +L R +  G+ PD  TY+++I G 
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPD 484
              N L EA R    +  RG  PD
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPD 322


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  305 bits (781), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 160/484 (33%), Positives = 269/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D    F  +ME  GV  +  TYN +IN  CR   L  A  ++  M   G
Sbjct: 71  LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + T NSL+NG C   R   A  ++D+M++MG  PDT T+ TL+    +    SEA 
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G  PD+V++  +I    + G+ D AL    +M+   +  D V+Y+ +I+  
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +AL +  EM  KG   DV TY+++++ LC     ++A  L ++MLER + P+ 
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF +LI    K+G + +A  LFD M Q+SI P+IVTYN+LI+GFC    +++A +++  
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+   P+ ++Y  LING+C    V +   L+ +M  +G+    V+  T+I G+ ++ D
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +MVS+GV P+ ++YNTL++G  +   ++KA  +   ++   + PD+ TYN+
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  G C+ G++ D   +   +  KG+ PD   Y T+I+G   +   +EA+    +M + G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550

Query: 481 FVPD 484
            +PD
Sbjct: 551 PLPD 554



 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 258/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LC+  ++  A   L +M + G  P  VT N+L+N +C    + EA  L++ M   G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+ +L++GL +  +   A  +++ M+  G  PD  TY  ++   C++     A 
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +  +  D+V +ST+I    +   +D AL  F EM + G+ PD   Y+ +I+  
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++  +MLE+    +VVT+N++++   +   L EA+ LF+EM++R + P+ 
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI+G C    +++A  +F +M  K   PD+VTYNTLI+GFCK  ++    +L+ D
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  N ++Y  LI+G+        A  ++ +MV  G+ P +++ NT++ G C++G 
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA      +    ++PD  +YN +  G  +   ++  + L   +  +G+ PDVI YN 
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++GFC++G   ++  +  +M E G  PD  TY TLI  H+   +   +     EM    
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585

Query: 481 FVPD 484
           F  D
Sbjct: 586 FAGD 589



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 147/431 (34%), Positives = 240/431 (55%), Gaps = 1/431 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ L + +K   A   +  M  KG  PD VTY  +IN  C+ G  + A  L+N M    
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V  Y+++I+ LCK    D A  +  EM   G+ PD  TY++L+   C     S+A 
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + P++V+F++LI  F++ G+L  A   F EM    + P+ V Y  +ING+
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA ++   M+ K C+ DVVTYNT++NG C+AK + +  +LF +M  RG+  + 
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLIHG  +  + + A  +F  M    + P+I+TYNTL+DG CK G++EKA  ++  
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+ P+  +Y I+  G C  G V + + L+  +  KG+KP +++ NT+I G+C+ G 
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     KM  +G  PDS +YNTLI   +R+ +   +  L+ +M +     D  TY +
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL 595

Query: 421 ILTGFCRQGRM 431
           + T     GR+
Sbjct: 596 V-TDMLHDGRL 605


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  305 bits (781), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 272/484 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A   L  M  KGV PDT TYN +I  YC  G LEEA +L+  MSG G
Sbjct: 241 LIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 300

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V TY+ LI   CK GRC  A+ V D M++ G  P++  Y+ LL     K  + +  
Sbjct: 301 LQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 360

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M R G+  +  +F+ LI  ++++G +D+A+  F EM+  GL PD V Y+ +I+  
Sbjct: 361 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 420

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A+   ++M+ +G   +++++ ++++GLC      + ++L  EM+ RG+ PD 
Sbjct: 421 CKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 480

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
               T++   CK+G + +A + FD++    +KPD+V+YNTLIDG+C VG+M+++ K    
Sbjct: 481 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDR 540

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+  +Y  L+NGY   G V +A  L+ EM  K +K   ++ N ++ G  ++G 
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGR 600

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E   KMV  G      +YNT++ G      +D+A  +   + ++    DV T+++
Sbjct: 601 IVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSI 660

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR+ +++ +   M+ +G  PD  TY+ +I  H+ +  L+E+      M + G
Sbjct: 661 VINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNG 720

Query: 481 FVPD 484
              D
Sbjct: 721 CAAD 724



 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 269/487 (55%), Gaps = 3/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY---PDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++  LC + K   A   L  M   G Y   P+ V+YNT+I+ + +EG +++A+ L + M 
Sbjct: 168 LIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMM 227

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G+GL P V TYNSLI+GLCK    D+A  +L  M   G+ PDT TYN ++   C    + 
Sbjct: 228 GQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLE 287

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA  +  +MS  G+ PD+V++S LI  + + G+   A   F  M   G  P++ +Y I++
Sbjct: 288 EAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILL 347

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +GY   G +++   + D M+  G   +   +N ++    +   + +A   F EM + G+ 
Sbjct: 348 HGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLR 407

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  +++T+IH  CK G +  A+  F+ M  + + P+I+++ +LI G C +GE +K  +L
Sbjct: 408 PDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEEL 467

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +MI+R I P+ I    +++  C  G V EA   +  ++  G+KP +VS NT+I GYC 
Sbjct: 468 AFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCF 527

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   ++ + L +MVS G+ PDS +YN+L+NG+ +   ++ A AL  +M  + +    IT
Sbjct: 528 VGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAIT 587

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            N++L G  + GR+  +  +  +M+++G      TY T++ G    + + EA R  +++ 
Sbjct: 588 SNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLR 647

Query: 478 QRGFVPD 484
            + F  D
Sbjct: 648 SKEFELD 654



 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 160/484 (33%), Positives = 259/484 (53%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC  ++ D A  M    M + G  PD  +YN LI   C E   +EA +L+  M+  
Sbjct: 132 LIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTAD 191

Query: 60  G---LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
           G     P V +YN++I+G  K+G  D+A  +  EM+  GL PD  TYN+L+   C+ + M
Sbjct: 192 GGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAM 251

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A  I   M  +GV PD  +++ +I  +   GQL+ A+   ++M  +GL PD V Y+++
Sbjct: 252 DKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLL 311

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I  YC+ G   EA  + D M+ KG   +   Y+ +L+G      L +  DL + M+  G+
Sbjct: 312 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 371

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
             +   F  LI  + K G ++KA+  F  M Q  ++PD+V+Y+T+I   CK G +E A  
Sbjct: 372 PFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVY 431

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
            +  M+S  +SPN IS+  LI+G CS+G   +   L +EM+ +GI P  +  NTI+   C
Sbjct: 432 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 491

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G   +A +F   ++  GV PD +SYNTLI+G+     MD++   + +M + GL PD  
Sbjct: 492 KEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSW 551

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN +L G+ + GR+ D+  +   M  K +     T   +++G      +  A   + +M
Sbjct: 552 TYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKM 611

Query: 477 LQRG 480
           + RG
Sbjct: 612 VDRG 615



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 241/480 (50%), Gaps = 4/480 (0%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           H    A      M + GV         LI  +C  G L+ AF         G +    T 
Sbjct: 70  HSAALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTL 129

Query: 69  NSLINGLCKKGRCDRAKE-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           N LI GLC   R D A + V   M ++G +PD  +YN L+   C ++   EA E+   M+
Sbjct: 130 NQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMT 189

Query: 128 RRG---VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
             G    +P++VS++T+I  F + G++D+A   F EM   GL PD V Y  +I+G C+  
Sbjct: 190 ADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQ 249

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + +A+ +   M +KG + D  TYN ++ G C    L EA  L  +M   G+ PD  T++
Sbjct: 250 AMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYS 309

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI  +CK G   +A ++FD M +K  KP+   Y+ L+ G+   G +     L   MI  
Sbjct: 310 LLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD 369

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            I   + ++ ILI  Y   G V +A   + EM   G++P +VS +T+I   C++G    A
Sbjct: 370 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA 429

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
               ++MVSEG+ P+ IS+ +LI+G        K   L  +M N+G+ PD I  N I+  
Sbjct: 430 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDN 489

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C++GR+ +++     +I  G+ PD  +Y TLI+G+     + E+ +  D M+  G  PD
Sbjct: 490 LCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPD 549



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 226/459 (49%), Gaps = 13/459 (2%)

Query: 42  REGFL--EEAFQLMNSMSGKGLKPGVFTYNSLINGLCK-------KGRCDRAKEVLDEML 92
           R G L  E+A  L + +  +     V  +NS++  + +       +     A  + + M+
Sbjct: 24  RSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMV 83

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           + G++   A    L+   C    +  A   F    + G     V+ + LI       + D
Sbjct: 84  RSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTD 143

Query: 153 RAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG---CVMDVVTY 208
            A+ M FR M   G  PD   Y  +I G C      EAL++   M   G   C  +VV+Y
Sbjct: 144 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSY 203

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           NT+++G  +   + +A  LF+EM+ +G+ PD  T+ +LI G CK   M+KA+ +   M  
Sbjct: 204 NTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFD 263

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K + PD  TYN +I G+C +G++E+A +L   M    + P+ ++Y +LI  YC +G   E
Sbjct: 264 KGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAE 323

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  ++  MV KG KP     + ++ GY   G      + L  M+ +G+  +  ++N LI 
Sbjct: 324 ARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILIC 383

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
            + +   +DKA    ++M   GL PDV++Y+ ++   C+ GR+ D+     +M+ +GL+P
Sbjct: 384 AYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSP 443

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           +  ++T+LI+G  S    K+      EM+ RG  PD  F
Sbjct: 444 NIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 482


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  305 bits (781), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 159/461 (34%), Positives = 256/461 (55%), Gaps = 3/461 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++++  K+ + D   M L EME +G    P+ VT+N +I    R+G LEEA +++  M  
Sbjct: 243 LLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRL 302

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
              K   FTYN LI GL  KG   +A ++  EM   G+ P   TYN ++    +   +  
Sbjct: 303 SK-KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEA 361

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A+  F EM   G+ PD++++++L+  + + G L  AL+ F +++ AGL P  + Y I+I+
Sbjct: 362 AQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILID 421

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYCR G + EA ++++EM+E+GC+ DV TY  ++ G   A  L  A + F+EML +G+ P
Sbjct: 422 GYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQP 481

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D + + T I      G + KA  L ++M  + I  D VTYN LIDG CK G +  A  L 
Sbjct: 482 DCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQ 541

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+   + P+ I+Y  LI+ +C  G + EA + + +M+  G+ P+ V+    I  YCR 
Sbjct: 542 MKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRR 601

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+   A  +  KM+ EGV+P+ I+YN LI+   R      A+    +M  +GLVP+  TY
Sbjct: 602 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTY 661

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            +++ G C++G   D+    + M + G++PD  T+  L  G
Sbjct: 662 TLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG 702



 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 160/467 (34%), Positives = 264/467 (56%), Gaps = 3/467 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS--GKGLKPGVFTYNSLINGLCK 77
           EM Q G+ P  VTYNTL++++ +EG  ++   L+  M   G G  P   T+N +I GL +
Sbjct: 227 EMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLAR 286

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           KG  + A E+++ M ++     + TYN L+     K  + +A+++  EM   G+ P +V+
Sbjct: 287 KGDLEEAAEMVEGM-RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVT 345

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ +I    ++GQ++ A + F EM++ GL PD + Y  ++NGYC+ G + EAL +  ++ 
Sbjct: 346 YNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLR 405

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G    V+TYN +++G CR   L EA  L  EM+E+G  PD  T+T L+ G     ++ 
Sbjct: 406 HAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLA 465

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            A   FD M  K ++PD   YNT I     +G + KA +L   M+   IS + ++Y ILI
Sbjct: 466 MAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILI 525

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G C  G++ +A  L  +MV  G++P  ++   +I  +C  G   +A +F   M+S+G+ 
Sbjct: 526 DGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLA 585

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P +++Y   I+ + R  N+  A+    KM  +G+ P+ ITYNV++   CR GR   +   
Sbjct: 586 PSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRH 645

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              M+E+GL P++ TYT LI+G+  + N ++A RF+ EM Q G  PD
Sbjct: 646 FHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPD 692



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 129/381 (33%), Positives = 198/381 (51%), Gaps = 1/381 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EME +G+ P  VTYN +I+   + G +E A      M   GL+P V TYNSL+NG CK G
Sbjct: 333 EMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAG 392

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
               A  +  ++   GL+P   TYN L+   CR  ++ EA  +  EM  +G  PD+ +++
Sbjct: 393 SLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYT 452

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            L+        L  A  +F EM S GL PD   Y   I      G + +A ++R+ M+ +
Sbjct: 453 ILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLE 512

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   D VTYN +++GLC+   L +A DL  +M+  G+ PD  T+T LIH HC+ G + +A
Sbjct: 513 GISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREA 572

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
              F  M    + P  VTY   I  +C+ G +  A   +  M+   + PN I+Y +LI+ 
Sbjct: 573 RKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 632

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G    A+R ++EM+ +G+ P   +   +I G C+ G+   A  F  +M   G+ PD
Sbjct: 633 LCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPD 692

Query: 380 SISYNTLINGFVREENMDKAF 400
            +++  L  GF  E +M+ A 
Sbjct: 693 YLTHKALFKGF-DEGHMNHAI 712



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 204/372 (54%), Gaps = 1/372 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L +  ++++A++   EM   G+ PD +TYN+L+N YC+ G L+EA  L   +   G
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TYN LI+G C+ G  + A+ + +EM++ G  PD  TY  L+  S    +++ A 
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAR 468

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E F EM  +G+ PD  +++T I      G + +A      M   G+  D V Y I+I+G 
Sbjct: 469 EFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGL 528

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A  ++ +M+  G   D +TY  +++  C   +L EA   F +M+  G+ P  
Sbjct: 529 CKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSA 588

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T  IH +C+ GN+  A   F  M ++ ++P+ +TYN LI   C+ G  + A + + +
Sbjct: 589 VTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHE 648

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R + PN  +Y +LI+G C  G+  +A R ++EM   GI P  ++   + KG+   G 
Sbjct: 649 MLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGH 707

Query: 361 ASKADEFLSKMV 372
            + A E+L   V
Sbjct: 708 MNHAIEYLENAV 719



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 230/437 (52%), Gaps = 9/437 (2%)

Query: 54  NSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK 113
           + M+  G+ P V   N ++  L    R D    V  EMLQ+G+ P   TYNTLL    ++
Sbjct: 191 HEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKE 250

Query: 114 ENMSEAEEIFCEMSRRGVA--PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
               +   +  EM  RG    P+ V+ + +I   +R G L+ A      M+ +     + 
Sbjct: 251 GRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA-SSF 309

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            Y  +I G    GFV +A  ++ EM  +G +  VVTYN +++GL ++  +  A   F EM
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
              G+ PD  T+ +L++G+CK G++ +AL LF  +    + P ++TYN LIDG+C++G++
Sbjct: 370 RAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDL 429

Query: 292 EKANKLWADMISRKISPNYISYGILING---YCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           E+A +L  +M+ +   P+  +Y IL+ G    CS+    E F    EM+ KG++P   + 
Sbjct: 430 EEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFD---EMLSKGLQPDCFAY 486

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           NT I+     G  +KA      M+ EG+  D+++YN LI+G  +  N++ A  L  KM +
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            GL PD ITY  ++   C +G + ++      MI  GL P   TYT  I+ +  + NL  
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606

Query: 469 AFRFHDEMLQRGFVPDD 485
           A+ +  +ML+ G  P++
Sbjct: 607 AYGWFRKMLEEGVEPNE 623



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 213/399 (53%), Gaps = 40/399 (10%)

Query: 123 FCEMSRRGVAPD-----------------------------------IVSFSTLIGIFSR 147
           F EM+  GVAPD                                   IV+++TL+  F +
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 148 NGQLDRALMYFREMKS--AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM-LEKGCVMD 204
            G+ D+  M  +EM++  +G +P++V + ++I G  R G + EA +M + M L K     
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA--S 307

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             TYN ++ GL     + +ADDL  EM   G+ P   T+  +IHG  + G +  A   F 
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M    ++PD++TYN+L++G+CK G +++A  L+ D+    ++P  ++Y ILI+GYC +G
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLG 427

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA RL  EMV +G  P + +   ++KG   +   + A EF  +M+S+G+ PD  +YN
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           T I   +    + KAF L   M  +G+  D +TYN+++ G C+ G ++D++ +  +M+  
Sbjct: 488 TRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN 547

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GL PD  TYT LI+ H  +  L+EA +F  +M+  G  P
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAP 586



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 109/212 (51%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  +G+  DTVTYN LI+  C+ G L +A  L   M   GL+P   TY  LI+  C++G 
Sbjct: 509 MMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGL 568

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A++   +M+  GL+P   TY   +   CR+ N+  A   F +M   GV P+ ++++ 
Sbjct: 569 LREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 628

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    R G+   A  +F EM   GLVP+   YT++I+G C+ G   +A++   EM + G
Sbjct: 629 LIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNG 688

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
              D +T+  +  G     M    + L N +L
Sbjct: 689 IHPDYLTHKALFKGFDEGHMNHAIEYLENAVL 720



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 36/261 (13%)

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L+ F  M    + PD+   N ++         +    + A+M+   I P+ ++Y  L++ 
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 320 YCSMGHVTEAFRLWYEM--VGKGIKPTLVSCNTIIKGYCRSGD----------------- 360
           +   G   +   L  EM   G G  P  V+ N +I G  R GD                 
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA 306

Query: 361 -----------------ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
                              KAD+   +M +EG+ P  ++YN +I+G ++   ++ A    
Sbjct: 307 SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            +M   GL PDVITYN +L G+C+ G + ++ L+   +   GL P   TY  LI+G+   
Sbjct: 367 VEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
            +L+EA R  +EM+++G +PD
Sbjct: 427 GDLEEARRLKEEMVEQGCLPD 447


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  305 bits (781), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 152/478 (31%), Positives = 261/478 (54%), Gaps = 3/478 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L +  +++    FL  M   G  PD +   TLI  +CR G   +A +++  + G G  P 
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V TYN +I+G CK G  + A  VLD   +M +SPD  TYNT+L   C    + +A E+  
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            M +R   PD+++++ LI    R+  + +A+    EM+  G  PD V Y +++NG C+ G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA+K  ++M   GC  +V+T+N IL  +C      +A+ L  +ML +G  P   TF 
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI+  C+ G + +A+++ + M +   +P+ ++YN L+ GFCK  +M++A +    M+SR
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y  ++   C  G V +A  +  ++  KG  P L++ NT+I G  ++G   KA
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            + L +M ++ + PD+I+Y++L+ G  RE  +D+A     + E  G+ P+ +T+N I+ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLG 528

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            C+  +   +   L  MI +G  P  ++YT LI G   +   KEA    +E+  +G +
Sbjct: 529 LCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 141/446 (31%), Positives = 245/446 (54%), Gaps = 3/446 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  K   A   L  +E  G  PD +TYN +I+ YC+ G +  A  +++ MS   
Sbjct: 143 LIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--- 199

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+++  LC  G+  +A EVLD MLQ    PD  TY  L+  +CR   + +A 
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAM 259

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  RG  PD+V+++ L+    + G+LD A+ +  +M S+G  P+ + + II+   
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  ++A K+  +ML KG    VVT+N ++N LCR  +L  A D+  +M + G  P+ 
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNS 379

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  L+HG CK+  M++A+   + M  +   PDIVTYNT++   CK G++E A ++   
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+  SP  I+Y  +I+G    G   +A +L  EM  K +KP  ++ ++++ G  R G 
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +F  +    GV P+++++N+++ G  +    D+A   +  M N+G  P   +Y +
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           ++ G   +G   ++  +L  +  KGL
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 138/381 (36%), Positives = 214/381 (56%), Gaps = 3/381 (0%)

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           N  L +  R   + E  +    M   G  PDI+  +TLI  F R G+  +A      ++ 
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
           +G VPD + Y ++I+GYC+ G +  AL + D M       DVVTYNTIL  LC +  L +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A ++ + ML+R  +PD  T+T LI   C+D  + +A+ L D M  +   PD+VTYN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           G CK G +++A K   DM S    PN I++ I++   CS G   +A +L  +M+ KG  P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           ++V+ N +I   CR G   +A + L KM   G  P+S+SYN L++GF +E+ MD+A   +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            +M ++G  PD++TYN +LT  C+ G++ D+  IL ++  KG +P   TY T+I+G    
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
               +A +  DEM  +   PD
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPD 483



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 178/382 (46%), Gaps = 25/382 (6%)

Query: 117 SEAEEIFCEMS------RRGVAPDIV-----SFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           S A+E FC +       +RG   D+      S S+ + ++SR       +    +++S+G
Sbjct: 8   SSAQEGFCLIQQFHRECKRGNKLDVSGRTTRSISSKVPLWSRKRNRLVLVSAASQVESSG 67

Query: 166 LVPDNVLYTIIINGYCR---NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
           L      +  + +G+     NG    A            V++ V  N  L  L R   L 
Sbjct: 68  LNGRAQKFDTLASGHSNSNGNGHFSSA--------NSSFVLEDVESNNHLRQLVRTGELE 119

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           E       M+  G  PD    TTLI G C+ G   KA  + +++      PD++TYN +I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMI 179

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            G+CK GE+  A  +   M    +SP+ ++Y  ++   C  G + +A  +   M+ +   
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P +++   +I+  CR     +A + L +M   G  PD ++YN L+NG  +E  +D+A   
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           ++ M + G  P+VIT+N+IL   C  GR  D+E +L  M+ KG +P   T+  LIN    
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
           +  L  A    ++M + G  P+
Sbjct: 357 KGLLGRAIDILEKMPKHGCQPN 378



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 90/167 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ ALCKD K++ A   L ++  KG  P  +TYNT+I+   + G   +A +L++ M  K 
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP   TY+SL+ GL ++G+ D A +   E  +MG+ P+  T+N++++  C+      A 
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAI 539

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
           +    M  RG  P   S++ LI   +  G    AL    E+ + GL+
Sbjct: 540 DFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  305 bits (781), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 172/486 (35%), Positives = 273/486 (56%), Gaps = 5/486 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC  +++DSA   L +M + G  P++V Y TLI++  +   + EA QL+  M   G
Sbjct: 217 VMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 276

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+N +I GLCK  R + A ++++ ML  G +PD  TY  L+   C+   +  A+
Sbjct: 277 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAK 336

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
           ++F  + +    P  V F+TLI  F  +G+LD A     +M  S G+VPD   Y  +I G
Sbjct: 337 DLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 392

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y + G V  AL++  +M  KGC  +V +Y  +++G C+   + EA +L NEM   G+ P+
Sbjct: 393 YWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPN 452

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F  LI   CK+  + +A+ +F  M +K  KPD+ T+N+LI G C+V E++ A  L  
Sbjct: 453 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 512

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DMIS  +  N ++Y  LIN +   G + EA +L  EMV +G     ++ N++IKG CR+G
Sbjct: 513 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAG 572

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  KA     KM+ +G+ P SIS N LING  R   +++A     +M  +G  PD++T+N
Sbjct: 573 EVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 632

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G CR GR+ D   +  ++  +G+ PD  TY TL++       + +A    DE ++ 
Sbjct: 633 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIED 692

Query: 480 GFVPDD 485
           GFVP+D
Sbjct: 693 GFVPND 698



 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 154/467 (32%), Positives = 265/467 (56%), Gaps = 5/467 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++L K ++++ A   L EM   G  PD  T+N +I   C+   + EA +++N M  +G
Sbjct: 252 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 311

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY  L+NGLCK GR D AK++   + +    P +  +NTL+        + +A+
Sbjct: 312 FTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAK 367

Query: 121 EIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M +  G+ PD+ ++++LI  + + G +  AL   R+M++ G  P+   YTI+++G
Sbjct: 368 AVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDG 427

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G + EA  + +EM   G   + V +N +++  C+   + EA ++F EM  +G  PD
Sbjct: 428 FCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 487

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            YTF +LI G C+   +  AL L   M  + +  + VTYNTLI+ F + GE+++A KL  
Sbjct: 488 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 547

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+ +    + I+Y  LI G C  G V +A  L+ +M+  G+ P+ +SCN +I G CRSG
Sbjct: 548 EMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSG 607

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A EF  +MV  G  PD +++N+LING  R   ++    +  K++ +G+ PD +TYN
Sbjct: 608 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYN 667

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
            +++  C+ G ++D+ L+L   IE G  P+  T++ L+   V Q  L
Sbjct: 668 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETL 714



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 219/399 (54%), Gaps = 5/399 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++N LCK  ++D+AK     + +    P +V +NTLI+ +   G L++A  +++ M +  
Sbjct: 322 LMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 377

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P V TYNSLI G  KKG    A EVL +M   G  P+  +Y  L+   C+   + EA
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 437

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EMS  G+ P+ V F+ LI  F +  ++  A+  FREM   G  PD   +  +I+G
Sbjct: 438 YNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 497

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C    +  AL +  +M+ +G V + VTYNT++N   R   + EA  L NEM+ +G   D
Sbjct: 498 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ +LI G C+ G ++KA +LF+ M +  + P  ++ N LI+G C+ G +E+A +   
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQK 617

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+ R  +P+ +++  LING C  G + +   ++ ++  +GI P  V+ NT++   C+ G
Sbjct: 618 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGG 677

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
               A   L + + +G  P+  +++ L+   V +E +D+
Sbjct: 678 FVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 247/540 (45%), Gaps = 68/540 (12%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLI 72
           S ++F     QKG       Y  LI      G  +   +L+  M  +G+      + S++
Sbjct: 88  SMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIM 147

Query: 73  NGLCKKGRCDRAKEVLDEMLQM-GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
               K G   +   ++ EM  +    P   +YN +L           A  +F +M  R +
Sbjct: 148 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 207

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P + +F  ++       ++D AL   R+M   G VP++V+Y  +I+   +   V EAL+
Sbjct: 208 PPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 267

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + +EM   GCV D  T+N ++ GLC+   + EA  + N ML RG  PD  T+  L++G C
Sbjct: 268 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLC 327

Query: 252 KDGNMNKALNLF--------------------------------DIMTQKSIKPDIVTYN 279
           K G ++ A +LF                                D++T   I PD+ TYN
Sbjct: 328 KIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 387

Query: 280 TLI-----------------------------------DGFCKVGEMEKANKLWADMISR 304
           +LI                                   DGFCK+G++++A  L  +M + 
Sbjct: 388 SLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD 447

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN + +  LI+ +C    + EA  ++ EM  KG KP + + N++I G C   +   A
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 507

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
              L  M+SEGV  ++++YNTLIN F+R   + +A  LV++M  QG + D ITYN ++ G
Sbjct: 508 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKG 567

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            CR G +  +  +  +M+  GL P   +   LING      ++EA  F  EM+ RG  PD
Sbjct: 568 LCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 627



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 83/157 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  ++D A+    +M + G+ P +++ N LIN  CR G +EEA +    M  +G
Sbjct: 564 LIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + T+NSLINGLC+ GR +    +  ++   G+ PDT TYNTL+   C+   + +A 
Sbjct: 624 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDAC 683

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
            +  E    G  P+  ++S L+        LDR   Y
Sbjct: 684 LLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTFY 720


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  305 bits (781), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 169/496 (34%), Positives = 275/496 (55%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCKD + D A+    EM+ +G+ PD ++Y +LI+ +CR G  E+A  L N M   G
Sbjct: 127 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG 186

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V T + LI+ LCK+G+   A E+L+ M+Q G   D  TY+TL+   C K  +SEA 
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEAT 246

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS------AGLVPDNVLYT 174
            +F  M + G  PD +++ TL+    + G ++ AL   +EM +          P  + Y+
Sbjct: 247 RLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYS 306

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           III+G C++    EA ++  EM  +G + DV++Y T+++G C +    +A  LFNEML+ 
Sbjct: 307 IIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 366

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G+ PD  T + LI   CK G + +A  L +++ Q+   PD+VT  TL+ G C    + KA
Sbjct: 367 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKA 426

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV------GKGIKPTLVSC 348
            +L+  M      PN ++   L+ G C  G++  A  L   M+      G   KP  +S 
Sbjct: 427 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 486

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           + II G C+ G   +A E   +M + GV PD ISY +LI+GF R      A  L ++M +
Sbjct: 487 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 546

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            G+ PDV T++V++   C++G++ ++  +L  MI++G  P+  TYTTL+ G    + + E
Sbjct: 547 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 606

Query: 469 AFRFHDEMLQRGFVPD 484
           A +   +M + G +PD
Sbjct: 607 ATQLFMKMQKLGCLPD 622



 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 173/572 (30%), Positives = 285/572 (49%), Gaps = 88/572 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+ K+  A   L  M Q+G   D VTY+TLI   C +  + EA QL  SM   G
Sbjct: 16  LIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML----QMGLS--PDTATYNTLLVESCRKE 114
            +P    Y +L+ GLC+ G+ + A  +  EML    Q G+   P   +Y+ ++   C+  
Sbjct: 76  CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDR 135

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              EA E+F EM  +G+ PD++S+++LI  F R+G+ ++A   F EM   G+  D    +
Sbjct: 136 REDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSS 195

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+  C+ G V+EA ++ + M+++GC++D+VTY+T++ GLC    ++EA  LF  M + 
Sbjct: 196 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKL 255

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALN--------------------------------- 261
           G  PD   + TL+ G C+ GN+N AL                                  
Sbjct: 256 GCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 315

Query: 262 --------LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
                   LF  M  + I PD+++Y TLI GFC  G+ EKA  L+ +M+   I P+  + 
Sbjct: 316 RREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 375

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
            +LI+  C  G V EA +L   ++ +G  P +V+C T++KG C     SKA +   KM  
Sbjct: 376 SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK 435

Query: 374 EG-----------------------------------------VDPDSISYNTLINGFVR 392
            G                                           P++ISY+ +I+G  +
Sbjct: 436 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK 495

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
               D+A  L  +M+  G++PDVI+Y  ++ GFCR G+  D++ +   M++ G+ PD +T
Sbjct: 496 CGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTT 555

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++ LI+    +  + EA    + M+QRG +P+
Sbjct: 556 FSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 587



 Score =  298 bits (763), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 161/502 (32%), Positives = 274/502 (54%), Gaps = 18/502 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ K+  A   L  M Q+G   D VTY+TLI   C +  + EA +L  SM   G
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ------MGLSPDTATYNTLLVESCRKE 114
            +P    Y +L+ GLC+ G  + A ++  EML       +   P   +Y+ ++   C+  
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              EA E+F EM  +G+ PD++S++TLI  F  +G+ ++A   F EM   G+ PD    +
Sbjct: 317 REDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 376

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+  C+ G V+EA K+ + ++++GC+ DVVT  T++ GLC    +++A  LF +M + 
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 436

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS------IKPDIVTYNTLIDGFCKV 288
           G  P+  T  TL+ G C+ GN+  AL L   M   +       KP+ ++Y+ +IDG CK 
Sbjct: 437 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 496

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G  ++A +L+ +M +  + P+ ISY  LI+G+C  G   +A  L+ EMV  G++P + + 
Sbjct: 497 GREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTF 556

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           + +I   C+ G   +A+E L  M+  G  P++++Y TL+ G    + + +A  L  KM+ 
Sbjct: 557 SVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 616

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMI----EKGLN--PDRSTYTTLINGHVS 462
            G +PDV+TY  ++ G C+ G +  +  +  +M+    + G N  PD  +Y+ +I+G   
Sbjct: 617 LGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCK 676

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
                EA     EM   G +P+
Sbjct: 677 HGREDEARELFKEMKALGVIPN 698



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 272/523 (52%), Gaps = 53/523 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFL-------------- 46
           ++  LC  H+I  A      M++ G  PD + Y TL+   C+ G +              
Sbjct: 232 LIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDT 291

Query: 47  ---------------------------EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
                                      +EA +L   M  +G+ P V +Y +LI+G C  G
Sbjct: 292 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSG 351

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + ++AK + +EML +G+ PD  T + L+   C+K  + EA ++   + +RG  PD+V+ +
Sbjct: 352 KWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCT 411

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+       ++ +A   F +M+  G +P+ V    ++ G C++G +  AL++   ML  
Sbjct: 412 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 471

Query: 200 ------GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
                  C  + ++Y+ I++GLC+     EA +LF EM   GV PD  ++T+LIHG C+ 
Sbjct: 472 TSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRS 531

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G    A  LF+ M    ++PD+ T++ LID  CK G++ +AN+L   MI R   PN ++Y
Sbjct: 532 GKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 591

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             L+ G C    ++EA +L+ +M   G  P +V+  T++KG C++G+   A E   KM+S
Sbjct: 592 TTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLS 651

Query: 374 E------GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           +         PD ISY+ +I+G  +    D+A  L  +M+  G++P+VI+Y  ++ GFCR
Sbjct: 652 DTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCR 711

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
            G++ D++ +   M+++G+  +  TY+ +I+G   +  + +A 
Sbjct: 712 SGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/437 (34%), Positives = 249/437 (56%), Gaps = 12/437 (2%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G++P V T   LI+  CK+G+   A E+L+ M+Q G   D  TY+TL+   C K  +SEA
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM----KSAGL--VPDNVLY 173
            ++F  M + G  PD +++ TL+    + G+++ AL   +EM       G+   P  V Y
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           +III+G C++    EA ++  EM  +G + DV++Y ++++G CR+    +A  LFNEML+
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+  D  T + LI   CK+G + +A  L ++M Q+    DIVTY+TLI G C    + +
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV------GKGIKPTLVS 347
           A +L+  M      P+ I+YG L+ G C  G++  A +L  EM+      G   KPTL+S
Sbjct: 245 ATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLIS 304

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            + II G C+     +A E   +M ++G+ PD ISY TLI+GF      +KA  L ++M 
Sbjct: 305 YSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 364

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           + G+ PDV T +V++   C++G++ ++  +L  +I++G  PD  T TTL+ G   ++ + 
Sbjct: 365 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRIS 424

Query: 468 EAFRFHDEMLQRGFVPD 484
           +A +   +M + G +P+
Sbjct: 425 KATQLFLKMQKLGCMPN 441



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 135/406 (33%), Positives = 226/406 (55%), Gaps = 12/406 (2%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML +G+ PD  T   L+   C++  + EA E+   M +RG   DIV++STLI       +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK------GCVMD 204
           +  A   F  MK  G  PD + Y  ++ G C+ G +  AL +  EML         C   
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +V+Y+ I++GLC+ +   EA +LF EM  +G+ PD  ++T+LIHG C+ G   KA  LF+
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M    I+ D+ T + LID  CK G++ +AN+L   MI R    + ++Y  LI G C   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE----GV--DP 378
            ++EA RL+  M   G +P  ++  T++KG C++G+ + A +   +M+++    G+   P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
             ISY+ +I+G  ++   D+A  L  +M+ QG++PDVI+Y  ++ GFC  G+   ++ + 
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             M++ G+ PD +T + LI+    +  + EA +  + ++QRG +PD
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPD 406


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  305 bits (780), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 165/486 (33%), Positives = 274/486 (56%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC+    + AK  + + E  G     VTYN  IN  C+   + EA ++  S+  KG
Sbjct: 231 VVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKG 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK  + TY +L+ GLC+    +   E++DEM+++G  P  A  + L+    +  ++  A 
Sbjct: 291 LKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAF 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  ++ + GV P++  ++++I    + G+L+ A + F  M   GL P++V YTI+I+G+
Sbjct: 351 ELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGF 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R   +  A    ++M+E G    V +YN+++N  C+   +  A+ LF EM+++G+ P  
Sbjct: 411 GRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTV 470

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI G+CKDG + KA  L+  MT K I P+ VT+  LI G C++ +M +A+KL+ +
Sbjct: 471 ATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDE 530

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+  KI PN ++Y +LI G+C  G+ T AF L  EM+ KG+ P   +   +I G C +G 
Sbjct: 531 MVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGR 590

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A EF++ +  +    D + Y  L+ GF +E  + +A     +M  +GL  D+++Y V
Sbjct: 591 VSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAV 650

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G   Q      EL L  M  KG+ PD   YT LI+G +   NLK+AF F   M+  G
Sbjct: 651 LISGALNQNDRILFEL-LREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEG 709

Query: 481 FVPDDA 486
           +VP+  
Sbjct: 710 YVPNSV 715



 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 155/481 (32%), Positives = 259/481 (53%), Gaps = 1/481 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC+  + +     + EM + G  P     + LI    + G +E AF+L+N +   G
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +F YNS+IN LCK G+ + A+ +   M + GL+P+  TY  L+    R+  +  A 
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAF 420

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M   G++  + S++++I    + G++  A + F+EM   GL P    YT +I+GY
Sbjct: 421 YYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGY 480

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A K+  EM  KG   + VT+  ++ GLC+   + EA  LF+EM+E  + P+ 
Sbjct: 481 CKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNE 540

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI GHC++GN  +A  L D M +K + PD  TY  LI G C  G + +A +   D
Sbjct: 541 VTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIND 600

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +    + + Y  L+ G+C  G + EA     EMVG+G++  LVS   +I G     D
Sbjct: 601 LHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND 660

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E L +M  +G+ PD++ Y  LI+GF++  N+ KAF     M  +G VP+ +TY  
Sbjct: 661 -RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTA 719

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + G +++++L+  RM+     P+  TY   ++    + N++ A + H+ MLQ  
Sbjct: 720 LVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGS 779

Query: 481 F 481
           F
Sbjct: 780 F 780



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 149/461 (32%), Positives = 255/461 (55%), Gaps = 10/461 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  CK  K+  A++   EM  KG+ P   TY +LI+ YC++G + +AF+L + M+GKG
Sbjct: 441 MINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKG 500

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +LI GLC+  +   A ++ DEM+++ + P+  TYN L+   CR+ N + A 
Sbjct: 501 IAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAF 560

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM ++G++PD  ++  LI      G++  A  +  ++       D + YT ++ G+
Sbjct: 561 ELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGF 620

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD----DLFNEMLERGV 236
           C+ G + EAL  R EM+ +G  MD+V+Y  +++G      L + D    +L  EM  +G+
Sbjct: 621 CKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG-----ALNQNDRILFELLREMHGKGM 675

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD   +T LI G  K GN+ KA   + IM  +   P+ VTY  L++G  K G + +A  
Sbjct: 676 QPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKL 735

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+  M+  +  PN+I+YG  ++     G++  A +L   M+ +G     V+ N +I+GYC
Sbjct: 736 LFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML-QGSFANTVTYNILIRGYC 794

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G   +A + L  M+  G+ PD I+Y+T I  + +  N+D A  +   M  +GL PD +
Sbjct: 795 QIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRV 854

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            +N ++   C  G +  +  +   M+ +GL P +STY +L+
Sbjct: 855 VFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895



 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 160/522 (30%), Positives = 273/522 (52%), Gaps = 39/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N+LCK  K++ A++    M ++G+ P+ VTY  LI+ + R   L+ AF   N M   G
Sbjct: 371 MINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECG 430

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V++YNS+IN  CK G+   A+ +  EM+  GL P  ATY +L+   C+   + +A 
Sbjct: 431 ISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAF 490

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM+ +G+AP+ V+F+ LI    +  ++  A   F EM    ++P+ V Y ++I G+
Sbjct: 491 KLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGH 550

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G    A ++ DEM++KG   D  TY  ++ GLC    ++EA +  N++  +    D 
Sbjct: 551 CREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610

Query: 241 YTFTTLIHGHCKDGNMNKALN-------------------------------LFDIMTQ- 268
             +T L+ G CK+G + +AL                                LF+++ + 
Sbjct: 611 LCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREM 670

Query: 269 --KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             K ++PD V Y  LIDGF K G ++KA + W  MI     PN ++Y  L+NG    G+V
Sbjct: 671 HGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYV 730

Query: 327 TEAFRLWYEM-VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
            EA  L+  M VG+ I P  ++    +    + G+   A +  + M+ +G   ++++YN 
Sbjct: 731 NEAKLLFKRMLVGEAI-PNHITYGCFLDHLTKEGNMENALQLHNAML-QGSFANTVTYNI 788

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR-MIEK 444
           LI G+ +     +A  L+  M   G+VPD ITY+  +  +C++G + D+ + +W  M+++
Sbjct: 789 LIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNV-DAAMDMWECMLQR 847

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           GL PDR  +  LI+       L  A +  ++M+ RG  P  +
Sbjct: 848 GLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQS 889



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 247/464 (53%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   G+ P+  T + L+NA  R     +  +L +++   G+KP  + Y  ++  LC+   
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKD 240

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            ++AKE++++    G S    TYN  +   C+ + + EA E+   +  +G+  D+V++ T
Sbjct: 241 FNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCT 300

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+    R  + +  +    EM   G VP     + +I G  + G +  A ++ +++ + G
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            V ++  YN+++N LC+   L EA+ LF+ M ERG+ P+  T+T LI G  +   ++ A 
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAF 420

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             F+ M +  I   + +YN++I+  CK G+M+ A  L+ +M+ + + P   +Y  LI+GY
Sbjct: 421 YYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGY 480

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G V +AF+L++EM GKGI P  V+   +I G C+    ++A +   +MV   + P+ 
Sbjct: 481 CKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNE 540

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YN LI G  RE N  +AF L+ +M  +GL PD  TY  ++ G C  GR+ +++  +  
Sbjct: 541 VTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIND 600

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  K    D   YT L+ G   +  +KEA     EM+ RG   D
Sbjct: 601 LHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMD 644



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 242/460 (52%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E  +K  +  +  ++ LI  Y +   + +   ++N M   GL P V T ++L+N L +  
Sbjct: 145 ESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIR 204

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +  E+ D ++  G+ PD   Y  ++   C  ++ ++A+EI  +    G +  IV+++
Sbjct: 205 KFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYN 264

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
             I    ++ ++  A+   R +   GL  D V Y  ++ G CR       ++M DEM+E 
Sbjct: 265 VFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIEL 324

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G V      + ++ GL +   +  A +L N++ + GV P+ + + ++I+  CK G + +A
Sbjct: 325 GYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEA 384

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             LF +M ++ + P+ VTY  LIDGF +  +++ A   +  MI   IS    SY  +IN 
Sbjct: 385 ELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINC 444

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G +  A  L+ EMV KG+KPT+ +  ++I GYC+ G   KA +   +M  +G+ P+
Sbjct: 445 QCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPN 504

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           ++++  LI G  +   M +A  L  +M    ++P+ +TYNV++ G CR+G    +  +L 
Sbjct: 505 TVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLD 564

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            MI+KGL+PD  TY  LI G  S   + EA  F +++  +
Sbjct: 565 EMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHK 604



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 187/398 (46%), Gaps = 70/398 (17%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+ +K+  A     EM +  + P+ VTYN LI  +CREG    AF+L++ M  KG
Sbjct: 511 LICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG 570

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +TY  LI GLC  GR   AKE ++++       D   Y  LL   C++  + EA 
Sbjct: 571 LSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEAL 630

Query: 121 ----------------------------------EIFCEMSRRGVAPDIVSFSTLIGIFS 146
                                             E+  EM  +G+ PD V ++ LI  F 
Sbjct: 631 VARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFI 690

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA----------------- 189
           ++G L +A  ++  M   G VP++V YT ++NG  + G+V EA                 
Sbjct: 691 KSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHI 750

Query: 190 ------------------LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
                             L++ + ML+ G   + VTYN ++ G C+     EA  L + M
Sbjct: 751 TYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVM 809

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           +  G+ PD  T++T I+ +CK GN++ A+++++ M Q+ +KPD V +N LI   C  GE+
Sbjct: 810 IGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGEL 869

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
           ++A +L  DM+ R + P   +Y  L+        +T+ 
Sbjct: 870 DRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 66/120 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  K   A   L  M   G+ PD +TY+T I  YC+ G ++ A  +   M  +G
Sbjct: 789 LIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRG 848

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP    +N LI+  C  G  DRA ++ ++M+  GL P  +TY++L+V+  ++  +++ +
Sbjct: 849 LKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 80/174 (45%)

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           + +LI  Y     V +   +   M   G+ P + + + ++    R     +  E    +V
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
           + GV PD   Y  ++      ++ +KA  ++++ E  G    ++TYNV + G C+  R+ 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           ++  +   + EKGL  D  TY TL+ G       +      DEM++ G+VP +A
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEA 331


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  305 bits (780), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 171/522 (32%), Positives = 272/522 (52%), Gaps = 38/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+LCKD K D A++   EM +KG+  + VTY+ LI+++CR G L+ A   +  M   G
Sbjct: 372 LINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAG 431

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+ YNSLING CK G    A    DEM+  GL P   +Y +L+   C K  + EA 
Sbjct: 432 IKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAF 491

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+ +G+AP+  +F+TLI    R  ++  A   F EM    ++P+ V Y ++I G+
Sbjct: 492 RLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGH 551

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA----DDLFNE------ 230
           C+ G  ++A ++ ++M++KG V D  TY  +++ LC    + EA    DDL  E      
Sbjct: 552 CKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNE 611

Query: 231 -------------------------MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                    M++RGV  D   +  LI G  K+ + +    L   
Sbjct: 612 MCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKN 671

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  + ++PD V Y ++IDG+ K G ++KA  +W  MI    +PN ++Y  LIN  C  G 
Sbjct: 672 MHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGL 731

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +A  LW EM+     P  V+    +    R G   KA +  + M+ +G+  +++SYN 
Sbjct: 732 MDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNI 790

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW-RMIEK 444
           L+ GF +   +++A  L+ +M +  + PD ITY+ I+   CR+G + D  +  W  M+ K
Sbjct: 791 LVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNL-DGAIEFWDTMLNK 849

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           GL PD   Y  LI G      L +AF   D+M++RG  P+ A
Sbjct: 850 GLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQA 891



 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 252/478 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCK  + +     + EM + G  P     ++L+    R+G + +AF L+N +   G
Sbjct: 302 LVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG 361

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +F YN+LIN LCK G+ D A+ +  EM + GL  +  TY+ L+   CR+  +  A 
Sbjct: 362 AMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAI 421

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +M   G+   +  +++LI    + G L  A+ +F EM   GL P  V YT +I+GY
Sbjct: 422 HFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGY 481

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA ++  EM  KG   +  T+ T+++ L RA  +T+A  LF+EMLE+ + P+ 
Sbjct: 482 CNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNE 541

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I GHCK+GN  KA  L + M QK + PD  TY  LI   C  G + +A K   D
Sbjct: 542 VTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDD 601

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +       N + Y  L++GYC  G + +A  +  EMV +G+   LV    +I G  +  D
Sbjct: 602 LHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQD 661

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S     L  M  + + PD + Y ++I+G+ +  ++ KAF +   M ++G  P+++TY  
Sbjct: 662 TSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTT 721

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++   C+ G M  +EL+   M+     P+  TY   ++    + ++++A + H++ML+
Sbjct: 722 LINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK 779



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 255/484 (52%), Gaps = 2/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  ++D   +   E+   G+ PD   Y  +I ++C      +A +++  M    
Sbjct: 199 VLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSD 258

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   V  YN LI+GLCK  R   A E+ + ++Q GL+    TY TL++  C+ +      
Sbjct: 259 L--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGA 316

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM   G  P   + S+L+    R G++  A      +K  G +P   +Y  +IN  
Sbjct: 317 GVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSL 376

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G   EA  +  EM EKG   + VTY+ +++  CR   L  A     +M+  G+    
Sbjct: 377 CKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITV 436

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y + +LI+GHCK GN++ A++ FD M  K +KP +V+Y +LI G+C  G++ +A +L+ +
Sbjct: 437 YPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHE 496

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I+PN  ++  LI+       +T+AFRL+ EM+ + + P  V+ N +I+G+C+ G+
Sbjct: 497 MTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E L++MV +G+ PD+ +Y  LI+       + +A   +  +  +    + + Y+ 
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSA 616

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G+C++GR+ D+  +   M+++G++ D   Y  LI+G + + +    F     M  + 
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676

Query: 481 FVPD 484
             PD
Sbjct: 677 LRPD 680



 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 256/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ ++  A      + QKG+    VTY TL+   C+    E    +M+ M   G
Sbjct: 267 LIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELG 326

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P     +SL+ GL +KG+   A ++++ + ++G  P    YN L+   C+     EAE
Sbjct: 327 FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAE 386

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+  + V++S LI  F R G+LD A+ +  +M  AG+      Y  +ING+
Sbjct: 387 LLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGH 446

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A+   DEM++KG    VV+Y ++++G C    L EA  L++EM  +G+ P+ 
Sbjct: 447 CKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNT 506

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTFTTLI    +   M  A  LFD M ++++ P+ VTYN +I+G CK G   KA +L   
Sbjct: 507 YTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQ 566

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+  +Y  LI+  CS G V EA +   ++  +  K   +  + ++ GYC+ G 
Sbjct: 567 MVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGR 626

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +MV  GVD D + Y  LI+G ++E++    F L+  M +Q L PD + Y  
Sbjct: 627 LRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTS 686

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G+ + G +  +  I   MI++G  P+  TYTTLIN       + +A     EML   
Sbjct: 687 MIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSN 746

Query: 481 FVPD 484
             P+
Sbjct: 747 STPN 750



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 222/393 (56%), Gaps = 1/393 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL + +++  A     EM ++ + P+ VTYN +I  +C+EG   +AF+L+N M  KG
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKG 571

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +TY  LI+ LC  GR   AK+ +D++ +     +   Y+ LL   C++  + +A 
Sbjct: 572 LVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDAL 631

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM +RGV  D+V ++ LI    +           + M    L PD V+YT +I+GY
Sbjct: 632 GVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGY 691

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V +A  + D M+++GC  ++VTY T++N LC+A ++ +A+ L+ EML     P+ 
Sbjct: 692 SKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNH 751

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+   +    ++G+M KA+ L + M  K +  + V+YN L+ GFCK+G +E+A KL  +
Sbjct: 752 VTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDE 810

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI   I P+ I+Y  +I   C  G++  A   W  M+ KG+KP  ++ N +I G C +G+
Sbjct: 811 MIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGE 870

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
             KA E    M+  GV P+  ++ +L +G  R+
Sbjct: 871 LGKAFELRDDMIRRGVKPNQATHKSLSHGASRK 903



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 239/459 (52%), Gaps = 2/459 (0%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +K  +  ++ ++ LI +Y +E  + ++  +   M    L P V T   ++NGL K  R D
Sbjct: 151 EKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVD 210

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
               +  E+L MG+ PD   Y  ++   C  +N ++A+E+   M    +  ++V ++ LI
Sbjct: 211 MVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLI 268

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               +N ++  A+     +   GL    V Y  ++ G C+         + DEM+E G V
Sbjct: 269 HGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFV 328

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
                 ++++ GL R   + +A DL N + + G  P  + +  LI+  CKDG  ++A  L
Sbjct: 329 PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELL 388

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  M +K +  + VTY+ LID FC+ G+++ A      MI   I      Y  LING+C 
Sbjct: 389 FKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCK 448

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +G+++ A   + EM+ KG+KPT+VS  ++I GYC  G   +A     +M  +G+ P++ +
Sbjct: 449 LGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYT 508

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           + TLI+   R   M  AF L  +M  Q ++P+ +TYNV++ G C++G    +  +L +M+
Sbjct: 509 FTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMV 568

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +KGL PD  TY  LI+   S   + EA +F D++ +  F
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHF 607



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 215/421 (51%), Gaps = 6/421 (1%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPD---TATYNTLLVESCRKENMSEAEEIFCE 125
           +SL+  L  +G  D  +EV + +L      D   +  ++ L+    +++ M ++  IF  
Sbjct: 125 SSLLQTLLLRGGLD-PREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRL 183

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M +  + P + +   ++   ++  ++D  L+ F E+ S G+ PD  +Y  +I  +C    
Sbjct: 184 MRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKN 243

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
             +A +M   M  +   ++VV YN +++GLC+ K + EA ++ N ++++G+     T+ T
Sbjct: 244 FAKAKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCT 301

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L+ G CK         + D M +    P     ++L++G  + G++  A  L   +    
Sbjct: 302 LVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG 361

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+   Y  LIN  C  G   EA  L+ EM  KG+    V+ + +I  +CR G    A 
Sbjct: 362 AMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAI 421

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
            FL KM+  G+      YN+LING  +  N+  A +   +M ++GL P V++Y  +++G+
Sbjct: 422 HFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGY 481

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C +G++H++  +   M  KG+ P+  T+TTLI+     N + +AFR  DEML++  +P++
Sbjct: 482 CNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNE 541

Query: 486 A 486
            
Sbjct: 542 V 542



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 68/117 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   CK  +++ A   L EM    ++PD +TY+T+I   CR G L+ A +  ++M  KG
Sbjct: 791 LVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKG 850

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           LKP    YN LI G C  G   +A E+ D+M++ G+ P+ AT+ +L   + RK ++S
Sbjct: 851 LKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSIS 907


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  305 bits (780), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 156/486 (32%), Positives = 271/486 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K +K D       +M+  G+  +  TY+ LIN +CR   L  A  ++  M   G
Sbjct: 87  LLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M   G  P+T T+NTL+         SEA 
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAV 206

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G  PD+V++  ++    + G  D A +   +M+   L P  ++YT II+G 
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGL 266

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+N  + +AL +  EM  KG   +VVTY+++++ LC     ++A  L ++M+ER + PD 
Sbjct: 267 CKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF+ LI    K+G + +A  L+D M ++SI P IVTY++LI+GFC    +++A +++  
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+   P+ +SY  LI G+C    V E   L+ EM  +G+    V+  T+I+G  ++GD
Sbjct: 387 MVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGD 446

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E   +MVS+GV P+ ++YNTL++G  +   ++KA  +   ++   + P + TYN+
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ PD   Y T+I+G   + + +EA     EM + G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566

Query: 481 FVPDDA 486
            +P+  
Sbjct: 567 TLPNSG 572



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 153/436 (35%), Positives = 242/436 (55%), Gaps = 1/436 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L   +K   A   +  M  KG  PD VTY  ++N  C+ G  + AF L+N M    
Sbjct: 192 LIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGK 251

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+PGV  Y ++I+GLCK    D A  +  EM   G+ P+  TY++L+   C     S+A 
Sbjct: 252 LEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + PD+ +FS LI  F + G+L  A   + EM    + P  V Y+ +ING+
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA +M + M+ K C  DVV+Y+T++ G C+AK + E  +LF EM +RG+  + 
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI G  + G+ + A  +F  M    + P+I+TYNTL+DG CK G++EKA  ++  
Sbjct: 432 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+ P   +Y I+I G C  G V + + L+  +  KG+KP +V+ NT+I G+CR G 
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +AD    +M  +G  P+S  YNTLI   +R+ + + +  L+ +M + G   D  T  +
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611

Query: 421 ILTGFCRQGRMHDSEL 436
           + T     GR+  S L
Sbjct: 612 V-TNMLHDGRLDKSFL 626



 Score =  274 bits (700), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 260/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++  A   L +M + G  P+ VT ++L+N YC    + EA  L++ M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+N+LI+GL    +   A  ++D M+  G  PD  TY  ++   C++ +   A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +  + P ++ ++T+I    +N  +D AL  F+EM++ G+ P+ V Y+ +I+  
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++  +M+E+    DV T++ +++   +   L EA+ L++EM++R + P  
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LI+G C    +++A  +F+ M  K   PD+V+Y+TLI GFCK   +++  +L+ +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  N ++Y  LI G    G    A  ++ EMV  G+ P +++ NT++ G C++G 
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA      +    ++P   +YN +I G  +   ++  + L   +  +G+ PDV+ YN 
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++GFCR+G   +++ +   M E G  P+   Y TLI   +   + + +     EM   G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601

Query: 481 FVPD 484
           F  D
Sbjct: 602 FAGD 605


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  305 bits (780), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 170/518 (32%), Positives = 267/518 (51%), Gaps = 35/518 (6%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A CK    D+AK    EM ++    + VTYN +I+  CR G +EEAF     M   GL
Sbjct: 252 LEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGL 311

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P  FTY +L+NGLCK GR   AK +LDEM   GL P+   Y TL+    ++   +EA +
Sbjct: 312 SPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFD 371

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           I  EM   GV P+ + +  LI    + GQL RA     EM   G  PD   Y  ++ G+ 
Sbjct: 372 ILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHF 431

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++     A ++ +EM   G + +  TY  ++NGLC+     EA +L  EM+  G+ P+ +
Sbjct: 432 QHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 491

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  LI GH K+G+++ A    + MT+ ++ PD+  YN+LI G   VG +E+A + +A +
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV 551

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R + P+  +Y  LI+GYC   ++ +A +L  +M+  G+KP   +   +++GY +S D 
Sbjct: 552 QKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDH 611

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD------- 414
            K    L  M+  G  PD+  Y  +I    R ENM+ AF +++++E  GLVPD       
Sbjct: 612 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 671

Query: 415 ----------------------------VITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
                                       ++ YN ++ GFCR G +  +  +   ++ KGL
Sbjct: 672 ISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 731

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+  TYT LI+G+    ++ +AF  + +ML RG  PD
Sbjct: 732 LPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPD 769



 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 151/482 (31%), Positives = 262/482 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  ++  AK  L EM   G+ P+ V Y TL++ + +EG   EAF ++N M   G
Sbjct: 321 LMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAG 380

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P    Y++LI GLCK G+  RA ++L+EM+++G  PDT TY+ L+    +  +   A 
Sbjct: 381 VQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAF 440

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM   G+ P+  ++  +I    +NG+   A     EM S GL P+  +Y  +I G+
Sbjct: 441 ELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 500

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +  A +  + M +   + D+  YN+++ GL     + EA++ + ++ +RG+ PD 
Sbjct: 501 SKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDE 560

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LIHG+CK  N+ KA  L   M    +KP+  TY  L++G+ K  + EK + +   
Sbjct: 561 FTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQS 620

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     P+   YGI+I       ++  AF +  E+   G+ P L   +++I G C+  D
Sbjct: 621 MLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMAD 680

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L +M  EG++P  + YN LI+GF R  ++ +A  +   +  +GL+P+ +TY  
Sbjct: 681 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTA 740

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G + D+  +   M+++G+ PD   Y  L  G     +L++A    +EM  RG
Sbjct: 741 LIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 800

Query: 481 FV 482
           + 
Sbjct: 801 YA 802



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 234/456 (51%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           T   + L++ Y + G +  A Q++  M   GL P     N L+  L +    +   ++  
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
            M   G+ PD  TY+T L   C+  +   A+++F EM RR  A + V+++ +I    R+G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            ++ A  +  EM   GL PD   Y  ++NG C+ G + EA  + DEM   G   +VV Y 
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T+++G  +     EA D+ NEM+  GV P+   +  LI G CK G + +A  L + M + 
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKV 414

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
             +PD  TY+ L+ G  +  + + A +L  +M +  I PN  +YGI+ING C  G   EA
Sbjct: 415 GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEA 474

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  EM+ +G+KP       +I G+ + G  S A E L  M    V PD   YN+LI G
Sbjct: 475 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKG 534

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                 +++A    ++++ +GLVPD  TY+ ++ G+C+   +  ++ +L +M+  GL P+
Sbjct: 535 LSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPN 594

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             TYT L+ G+   N+ ++       ML  G  PD+
Sbjct: 595 ADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDN 630



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 185/378 (48%), Gaps = 51/378 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    +I+ A+ +  +++++G+ PD  TY+ LI+ YC+   LE+A QL+  M   G
Sbjct: 531 LIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG 590

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP   TY  L+ G  K    ++   +L  ML  G  PD   Y  ++    R ENM  A 
Sbjct: 591 LKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 650

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E+ + G+ PD+  +S+LI    +   +++A+    EM   GL P  V Y  +I+G+
Sbjct: 651 MVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 710

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G +  A  + D +L KG + + VTY  +++G C+   +T+A DL+ +ML+RG+ PD 
Sbjct: 711 CRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDA 770

Query: 241 YT----------------------------------FTTLIHGHCKDGNMNKALNLFDIM 266
           +                                   F+TL+ G CK G + +   L  +M
Sbjct: 771 FVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVM 830

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             + I P+  T   +I  F K G++ +A++++A++  +K S +                 
Sbjct: 831 MDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQS----------------S 874

Query: 327 TEAFRLWY-EMVGKGIKP 343
           T+ F L + +M+ KG+ P
Sbjct: 875 TDRFSLLFTDMINKGLIP 892


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  304 bits (779), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 160/485 (32%), Positives = 259/485 (53%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +   +  L ++ ++GV P+  TYN  I   C++G L+ A +++  +  +G
Sbjct: 222 LLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQG 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TYN LI GLCK  +   A+  L +++  GL PD+ TYNTL+   C+   +  AE
Sbjct: 282 PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAE 341

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I       G  PD  ++ +LI      G+ +RAL  F E    G+ P+ +LY  +I G 
Sbjct: 342 RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G +LEA ++  EM EKG + +V T+N ++NGLC+   +++AD L   M+ +G FPD 
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF  LIHG+     M  AL + D+M    + PD+ TYN+L++G CK  + E   + +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +  +PN  ++ IL+   C    + +A  L  EM  K + P  V+  T+I G+C++GD
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 361 ASKADEFLSKMVS-EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A     KM     V   + +YN +I+ F  + N+  A  L  +M ++ L PD  TY 
Sbjct: 582 LDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++ GFC+ G +      L  M+E G  P  +T   +IN    ++ + EA      M+Q+
Sbjct: 642 LMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701

Query: 480 GFVPD 484
           G VP+
Sbjct: 702 GLVPE 706



 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 243/465 (52%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D A      M  +G+ PD  ++   + ++CR      A +L+N+MS +G +  V  Y ++
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           + G  ++   D   E+  +ML  G+S   +T+N LL   C+K ++ E E++  ++ +RGV
Sbjct: 188 VGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGV 247

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P++ +++  I    + G+LD A+     +   G  PD V Y  +I G C+N    EA  
Sbjct: 248 LPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEV 307

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
              +++ +G   D  TYNT++ G C+  M+  A+ +    +  G  PD +T+ +LI G C
Sbjct: 308 YLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLC 367

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
            +G  N+AL LF+    K IKP+++ YNTLI G    G + +A +L ++M  + + P   
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQ 427

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           ++ IL+NG C MG V++A  L   M+ KG  P + + N +I GY        A E L  M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           +  GVDPD  +YN+L+NG  +    +        M  +G  P++ T+N++L   CR  ++
Sbjct: 488 MDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKL 547

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
             +  +L  M  K +NPD  T+ TLI+G     +L  A+    +M
Sbjct: 548 DKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 260/518 (50%), Gaps = 36/518 (6%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + + C+  +  +A   L  M  +G   + V Y T++  +  E F +E ++L   M   G+
Sbjct: 153 MKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGV 212

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
              + T+N L++ LCKKG     +++LD++++ G+ P+  TYN  +   C+K  +  A  
Sbjct: 213 SLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVR 272

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +   +  +G  PD+V+++ LI    +N +   A +Y  ++ + GL PD+  Y  +I GYC
Sbjct: 273 MVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYC 332

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G V  A ++    +  G V D  TY ++++GLC       A  LFNE L +G+ P+  
Sbjct: 333 KGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            + TLI G    G + +A  L   M++K + P++ T+N L++G CK+G +  A+ L   M
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           IS+   P+  ++ ILI+GY +   +  A  +   M+  G+ P + + N+++ G C++   
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKY 512

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
               E    MV +G  P+  ++N L+    R   +DKA  L+ +M+N+ + PD +T+  +
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTL 572

Query: 422 LTGFCRQG----------RMHD--------------------------SELILWRMIEKG 445
           + GFC+ G          +M +                          +E +   M+++ 
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           L PD  TY  +++G     N+   ++F  EM++ GF+P
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIP 670



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/417 (32%), Positives = 237/417 (56%), Gaps = 1/417 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+ K   A+++L ++  +G+ PD+ TYNTLI  YC+ G ++ A +++ +    G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNG 351

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY SLI+GLC +G  +RA  + +E L  G+ P+   YNTL+     +  + EA 
Sbjct: 352 FVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAA 411

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS +G+ P++ +F+ L+    + G +  A    + M S G  PD   + I+I+GY
Sbjct: 412 QLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                +  AL++ D M++ G   DV TYN++LNGLC+     +  + +  M+E+G  P+ 
Sbjct: 472 STQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNL 531

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF  L+   C+   ++KAL L + M  KS+ PD VT+ TLIDGFCK G+++ A  L+  
Sbjct: 532 FTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591

Query: 301 MIS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           M     +S +  +Y I+I+ +    +VT A +L+ EMV + + P   +   ++ G+C++G
Sbjct: 592 MEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           +     +FL +M+  G  P   +   +IN    E+ + +A  ++ +M  +GLVP+ +
Sbjct: 652 NVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 229/457 (50%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   +YN +++     G+ ++A ++   M  +G+ P V+++   +   C+  R   A  +
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRL 168

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ M   G   +   Y T++     +    E  E+F +M   GV+  + +F+ L+ +  +
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCK 228

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +        ++   G++P+   Y   I G C+ G +  A++M   ++++G   DVVT
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVT 288

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ GLC+     EA+    +++  G+ PD +T+ TLI G+CK G +  A  +     
Sbjct: 289 YNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAV 348

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
                PD  TY +LIDG C  GE  +A  L+ + + + I PN I Y  LI G  + G + 
Sbjct: 349 FNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLIL 408

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA +L  EM  KG+ P + + N ++ G C+ G  S AD  +  M+S+G  PD  ++N LI
Sbjct: 409 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+  +  M+ A  ++  M + G+ PDV TYN +L G C+  +  D       M+EKG  
Sbjct: 469 HGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCA 528

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  T+  L+      + L +A    +EM  +   PD
Sbjct: 529 PNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 250/476 (52%), Gaps = 1/476 (0%)

Query: 10  KIDSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           K ++ +  L +M Q  G +     Y   +  Y R+G ++EA  +   M     +P VF+Y
Sbjct: 55  KFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSY 114

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N++++ L   G  D+A +V   M   G++PD  ++   +   CR      A  +   MS 
Sbjct: 115 NAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSS 174

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           +G   ++V++ T++G F      D     F +M ++G+      +  +++  C+ G V E
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKE 234

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
             K+ D+++++G + ++ TYN  + GLC+   L  A  +   ++++G  PD  T+  LI+
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIY 294

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G CK+    +A      +  + ++PD  TYNTLI G+CK G ++ A ++  + +     P
Sbjct: 295 GLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVP 354

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           +  +Y  LI+G C  G    A  L+ E +GKGIKP ++  NT+IKG    G   +A +  
Sbjct: 355 DEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLA 414

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           S+M  +G+ P+  ++N L+NG  +   +  A  LV  M ++G  PD+ T+N+++ G+  Q
Sbjct: 415 SEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +M ++  IL  M++ G++PD  TY +L+NG    +  ++    +  M+++G  P+
Sbjct: 475 LKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPN 530



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 235/474 (49%), Gaps = 37/474 (7%)

Query: 48  EAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNT 105
           +A ++ NSM  + G K  + TY S+I  L   G+ +  +EVL +M Q +G       Y  
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVG 81

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
            +    RK  + EA  +F  M      P + S++ ++ I   +G  D+A   +  M+  G
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRG 141

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG----------- 214
           + PD   +TI +  +CR      AL++ + M  +GC M+VV Y T++ G           
Sbjct: 142 ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGY 201

Query: 215 ------------------------LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
                                   LC+   + E + L +++++RGV P+ +T+   I G 
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGL 261

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+ G ++ A+ +   +  +  KPD+VTYN LI G CK  + ++A      +++  + P+ 
Sbjct: 262 CQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDS 321

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +Y  LI GYC  G V  A R+    V  G  P   +  ++I G C  G+ ++A    ++
Sbjct: 322 FTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNE 381

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
            + +G+ P+ I YNTLI G   +  + +A  L S+M  +GL+P+V T+N+++ G C+ G 
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGC 441

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + D++ ++  MI KG  PD  T+  LI+G+ +Q  ++ A    D M+  G  PD
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPD 495



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 181/394 (45%), Gaps = 42/394 (10%)

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR-GVAPDIVSFSTLI---GIFSRNGQL 151
           + P     +   V  C+K+ M +A E+F  M +  G    + ++ ++I   G++ +   +
Sbjct: 1   MGPPLLPKHVTTVIRCQKDPM-KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAM 59

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           +  L+  R+     ++    +Y   +  Y R G V EA+ + + M    C   V +YN I
Sbjct: 60  EEVLVDMRQNVGNHMLEG--VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAI 117

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++ L  +    +A  ++  M +RG                                   I
Sbjct: 118 MSILVDSGYFDQAHKVYMRMRDRG-----------------------------------I 142

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            PD+ ++   +  FC+      A +L  +M S+    N ++Y  ++ G+       E + 
Sbjct: 143 TPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYE 202

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L+ +M+  G+   L + N ++   C+ GD  + ++ L K++  GV P+  +YN  I G  
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLC 262

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           ++  +D A  +V ++ +QG  PDV+TYN ++ G C+  +  ++E+ L +++ +GL PD  
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           TY TLI G+     ++ A R     +  GFVPD+
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDE 356


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  304 bits (778), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 266/484 (54%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCK  + ++ +  + EM + G  P     + L++   ++G +  AF L+N +   G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +F YN+LIN +CK G+ D A+ + + M   GL P+  TY+ L+   C++  +  A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +M+  G+   +  +S+LI    + G+L  A   F EM + GL P+ V+YT +I+GY
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++  EM  KG   +  T+  +++GLC A  + EA+ LF EM+E  V P+ 
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI GHCK+GN  +A  L D M +K + PD  TY  LI G C  G + +A +   D
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   +   N + +  L++GYC  G + +A     EM+G+G+   LV  + +I G  R  D
Sbjct: 591 LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD 650

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                + L +M  +G+ PD++ Y T+I+   +  N+  AF L   M ++G +P+V+TY  
Sbjct: 651 RRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTA 710

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G M  +EL+   M+     P+++TY   ++   S+ N+++A + HD +L+ G
Sbjct: 711 LINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-G 769

Query: 481 FVPD 484
           F+ +
Sbjct: 770 FLAN 773



 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 266/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V +LC+      A+  +  ME  G      TYN  I   C+   + EA ++ N +S KG
Sbjct: 221 VVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKG 280

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  V TY +L+ GLCK    +  +E+++EM++ G  P  A  + L+    +K N+  A 
Sbjct: 281 LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAF 340

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  ++ + GVAP +  ++ LI    ++G+LD A   F  M   GL P++V Y+I+I+ +
Sbjct: 341 DLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSF 400

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  AL    +M E G    V  Y+++++G C+   L  A  LF+EM+  G+ P+ 
Sbjct: 401 CKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNV 460

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+LI G+CK+G ++ A  L+  MT K I P+  T+  LI G C    M +ANKL+ +
Sbjct: 461 VIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGE 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN ++Y +LI G+C  G+   AF L  EMV KG+ P   +   +I G C +G 
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A EF++ +  E    + + ++ L++G+ +E  +D A     +M  +G+  D++ Y+V
Sbjct: 581 VSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSV 640

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  RQ        +L +M ++GL PD   YTT+I+ +    NLK AF   D M+  G
Sbjct: 641 LIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEG 700

Query: 481 FVPD 484
            +P+
Sbjct: 701 CLPN 704



 Score =  300 bits (767), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 150/459 (32%), Positives = 264/459 (57%), Gaps = 1/459 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  K+ +AK    EM   G+ P+ V Y +LI+ YC+EG L  AF+L + M+GKG
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T+ +LI+GLC   R   A ++  EM++  + P+  TYN L+   C++ N   A 
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +G+ PD  ++  LI      G++  A  +  +++      + + ++ +++GY
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGY 610

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +AL    EML +G  MD+V Y+ ++ G+ R +      DL  +M ++G+ PD 
Sbjct: 611 CKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDN 670

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TT+I  + K GN+  A  L+DIM  +   P++VTY  LI+G CK+G M+KA  L  +
Sbjct: 671 VLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCRE 730

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    PN  +Y   ++   S G++ +A +L ++++ +G     V+ N +I+G+C+ G 
Sbjct: 731 MLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGR 789

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L  M+  G+ PD ISY+T+I  + R  ++ +A  L   M N+G+ PD + YN 
Sbjct: 790 IQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNF 849

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++ G C  G +  +  +   M+ +G+ P+R+TY +LI+G
Sbjct: 850 LIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888



 Score =  297 bits (760), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 159/521 (30%), Positives = 277/521 (53%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N++CKD K+D A+     M  KG++P+ VTY+ LI+++C+ G L+ A   +  M+  G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+ Y+SLI+G CK G+   AK + DEM+  GL P+   Y +L+   C++  +  A 
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+ +G++P+  +F+ LI       ++  A   F EM    ++P+ V Y ++I G+
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G  + A ++ DEM+EKG V D  TY  +++GLC    ++EA +  N++       + 
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 241 YTFTTLIHGHCKDGNMNKALN--------------------------------LFDIMTQ 268
             F+ L+HG+CK+G ++ AL+                                + D++ Q
Sbjct: 601 MCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQ 660

Query: 269 ---KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
              + ++PD V Y T+ID   K G ++ A  LW  M+S    PN ++Y  LING C +G 
Sbjct: 661 MHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGL 720

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +A  L  EM+     P   +    +      G+  KA + L  ++ EG   ++++YN 
Sbjct: 721 MDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNI 779

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI GF +   + +A  ++  M + G+ PD I+Y+ I+  +CR+G + ++  +   M+ +G
Sbjct: 780 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 839

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +NPD   Y  LI G      L +AF   D+M++RG  P+ A
Sbjct: 840 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRA 880



 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 242/460 (52%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G+ P   T + ++N   R      A  L + +   GL+P V+ Y +++  LC+     RA
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           +EV+  M   G     ATYN  +   C+ + + EA EI   +S +G+  D+ ++ TL+  
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             +  + +       EM   G VP     + +++G  + G +  A  + +++ + G    
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +  YN ++N +C+   L EA+ LFN M  +G+FP+  T++ LI   CK G ++ AL+   
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            MT+  IK  +  Y++LI G CK+G++  A  L+ +MI+  + PN + Y  LI+GYC  G
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +  AFRL++EM GKGI P   +   +I G C +   ++A++   +MV   V P+ ++YN
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI G  +E N  +AF L+ +M  +GLVPD  TY  +++G C  GR+ ++   +  +  +
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
               +   ++ L++G+  +  L +A     EML RG   D
Sbjct: 595 QQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMD 634



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 230/462 (49%), Gaps = 35/462 (7%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +K  +  T+ ++ LI  Y +     +   ++  M   G+ P + T + ++NGL +  +  
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A  + DE++  GL PD   Y T +V S             CE+       D +    +I
Sbjct: 198 MALHLFDEIVSSGLRPDVYVY-TAVVRS------------LCELK------DFIRAREVI 238

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
           G                 M+S+G       Y + I G C+N  V EA+++++ +  KG  
Sbjct: 239 G----------------RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLR 282

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DV TY T++ GLC+ +     +++ NEM+E G  P     + L+ G  K GN+  A +L
Sbjct: 283 ADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDL 342

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            + + +  + P +  YN LI+  CK G++++A  L+ +M  + + PN ++Y ILI+ +C 
Sbjct: 343 VNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCK 402

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G +  A     +M   GIK T+   +++I G+C+ G    A     +M++ G+ P+ + 
Sbjct: 403 RGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVI 462

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y +LI+G+ +E  +  AF L  +M  +G+ P+  T+  +++G C   RM ++  +   M+
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           E  + P+  TY  LI GH  + N   AF   DEM+++G VPD
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPD 564



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 210/400 (52%), Gaps = 35/400 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC  +++  A     EM +  V P+ VTYN LI  +C+EG    AF+L++ M  KG
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +TY  LI+GLC  GR   A+E ++++       +   ++ LL   C++  + +A 
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDAL 620

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   EM  RGVA D+V +S LI    R       +   ++M   GL PDNVLYT +I+  
Sbjct: 621 DACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDAN 680

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +  A  + D M+ +GC+ +VVTY  ++NGLC+  ++ +A+ L  EML     P+ 
Sbjct: 681 AKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 740

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDI----------------------------------M 266
            T+   +     +GN+ KA+ L D+                                  M
Sbjct: 741 NTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNM 800

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               I PD ++Y+T+I  +C+ G++++A KLW  M++R ++P+ ++Y  LI G C  G +
Sbjct: 801 IDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGEL 860

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYC-RSGDASKAD 365
           T+AF L  +M+ +G+KP   + N++I G C  S  +S AD
Sbjct: 861 TKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 80/176 (45%)

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           + + +LI  Y       +   +   M+  GI P + + + ++ G  R      A     +
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           +VS G+ PD   Y  ++      ++  +A  ++ +ME+ G    V TYNV + G C+  R
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + ++  I   +  KGL  D  TY TL+ G       +      +EM++ GFVP +A
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEA 321


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  304 bits (778), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 160/498 (32%), Positives = 273/498 (54%), Gaps = 39/498 (7%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC D +  D+  + L  M + G  P+  +YN L+   C E   +EA +L++ M+  
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187

Query: 58  -GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            G G  P V +Y ++ING  K+G  D+A     EML  G+ PD  TYN+++   C+ + M
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A E+   M + GV PD +++++++  +  +GQ   A+ + ++M+S G+ PD V Y+++
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++  C+NG  +EA K+ D M ++G   ++ TY T+L G      L E   L + M+  G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY------------------ 278
            PD Y F+ LI  + K G +++A+ +F  M Q+ + P+ VTY                  
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 279 -----------------NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
                            N+LI G C   + E+A +L  +M+ R I  N I +  +I+ +C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G V E+ +L+  MV  G+KP +++ NT+I GYC +G   +A + LS MVS G+ P+++
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y+TLING+ +   M+ A  L  +ME+ G+ PD+ITYN+IL G  +  R   ++ +  R+
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607

Query: 442 IEKGLNPDRSTYTTLING 459
            E G   + STY  +++G
Sbjct: 608 TESGTQIELSTYNIILHG 625



 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 269/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV PD +TYN++++ YC  G  +EA   +  M   G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY+ L++ LCK GRC  A+++ D M + GL P+  TY TLL     K  + E  
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ PD   FS LI  +++ G++D+A++ F +M+  GL P+ V Y  +I   
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A+   ++M+++G     + YN++++GLC       A++L  EML+RG+  + 
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I  HCK+G + ++  LF++M +  +KP+++TYNTLI+G+C  G+M++A KL + 
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + PN ++Y  LINGYC +  + +A  L+ EM   G+ P +++ N I++G  ++  
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E   ++   G   +  +YN +++G  + +  D A  +   +    L  +  T+N+
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  +++ +       GL P+  TY  +    + Q  L+E  +    M   G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716

Query: 481 FVPD 484
              D
Sbjct: 717 CTVD 720



 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 251/498 (50%), Gaps = 39/498 (7%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V PD  TY  LI   CR G L+  F  + ++  KG +     +  L+ GLC   R   A 
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR---GVAPDIVSFSTL 141
           + VL  M ++G  P+  +YN LL   C +    EA E+   M+     G  PD+VS++T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F + G  D+A   + EM   G++PD V Y  II   C+   + +A+++ + M++ G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + D +TYN+IL+G C +    EA     +M   GV PD  T++ L+   CK+G   +A  
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +FD MT++ +KP+I TY TL+ G+   G + + + L   M+   I P++  + ILI  Y 
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G V +A  ++ +M  +G+ P  V+   +I   C+SG    A  +  +M+ EG+ P +I
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLV----------------------------- 412
            YN+LI+G       ++A  L+ +M ++G+                              
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 413 ------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
                 P+VITYN ++ G+C  G+M ++  +L  M+  GL P+  TY+TLING+   + +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 467 KEAFRFHDEMLQRGFVPD 484
           ++A     EM   G  PD
Sbjct: 563 EDALVLFKEMESSGVSPD 580



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 206/396 (52%), Gaps = 4/396 (1%)

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRA 154
           ++PD  TY  L+   CR   +         + ++G   D ++F+ L+ G+ +     D  
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
            +  R M   G +P+   Y I++ G C   R+   LE L M  +    G   DVV+Y T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           +NG  +     +A   ++EML+RG+ PD  T+ ++I   CK   M+KA+ + + M +  +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            PD +TYN+++ G+C  G+ ++A      M S  + P+ ++Y +L++  C  G   EA +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           ++  M  +G+KP + +  T+++GY   G   +    L  MV  G+ PD   ++ LI  + 
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           ++  +D+A  + SKM  QGL P+ +TY  ++   C+ GR+ D+ L   +MI++GL+P   
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            Y +LI+G  + N  + A     EML RG   +  F
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 204/374 (54%), Gaps = 1/374 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K  K+D A +   +M Q+G+ P+ VTY  +I   C+ G +E+A      M  +G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG   YNSLI+GLC   + +RA+E++ EML  G+  +T  +N+++   C++  + E+E
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV P++++++TLI  +   G++D A+     M S GL P+ V Y+ +INGY
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM   G   D++TYN IL GL + +    A +L+  + E G   + 
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   + AL +F  +    +K +  T+N +ID   KVG  ++A  L+  
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
             S  + PNY +Y ++       G + E  +L+  M   G        N I++   + G+
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 361 ASKADEFLSKMVSE 374
            ++A  +LS M+ E
Sbjct: 737 ITRAGTYLS-MIDE 749



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 39/219 (17%)

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK---------------------- 342
           +++P+  +YGILI   C  G +   F     ++ KG +                      
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 343 --------------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSE---GVDPDSISYNT 385
                         P + S N ++KG C    + +A E L  M  +   G  PD +SY T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +INGF +E + DKA++   +M ++G++PDV+TYN I+   C+   M  +  +L  M++ G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + PD  TY ++++G+ S    KEA  F  +M   G  PD
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  304 bits (778), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 169/526 (32%), Positives = 277/526 (52%), Gaps = 42/526 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V +LC+      A+  +  ME  G      TYN  I   C+   + EA ++ N +S KG
Sbjct: 221 VVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKG 280

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  V TY +L+ GLCK    +  +E+++EM++ G  P  A  + L+    +K N+  A 
Sbjct: 281 LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAF 340

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  ++ + GVAP +  ++ LI    ++G+LD A   F  M   GL P++V Y+I+I+ +
Sbjct: 341 DLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSF 400

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  AL    +M E G    V  Y+++++G C+   L  A  LF+EM+  G+ P+ 
Sbjct: 401 CKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNV 460

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+LI G+CK+G ++ A  L+  MT K I P+  T+  LI G C    M +ANKL+ +
Sbjct: 461 VIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGE 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN ++Y +LI G+C  G+   AF L  EMV KG+ P   +   +I G C +G 
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580

Query: 361 ASKADEFLSKMVS--------EGVDPDSISYNTLINGFVREENMDKAFALVSKM------ 406
            S+A EF++ +          EG  P+ ++Y  LING  +   MDKA  L  +M      
Sbjct: 581 VSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL 640

Query: 407 ENQ----------------------------GLVPDVITYNVILTGFCRQGRMHDSELIL 438
            NQ                            G + + +TYN+++ GFC+ GR+ ++  +L
Sbjct: 641 PNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVL 700

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             MI+ G++PD  +Y+T+I  +  + +LKEA +  + ML RG  PD
Sbjct: 701 VNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPD 746



 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/494 (31%), Positives = 262/494 (53%), Gaps = 9/494 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCK  + ++ +  + EM + G  P     + L++   ++G +  AF L+N +   G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +F YN+LIN +CK G+ D A+ + + M   GL P+  TY+ L+   C++  +  A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +M+  G+   +  +S+LI    + G+L  A   F EM + GL P+ V+YT +I+GY
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++  EM  KG   +  T+  +++GLC A  + EA+ LF EM+E  V P+ 
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI GHCK+GN  +A  L D M +K + PD  TY  LI G C  G + +A +   D
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 301 MISRKIS--------PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           +   +          PN ++Y  LING C +G + +A  L  EM+     P   +    +
Sbjct: 591 LQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 650

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
                 G+  KA + L  ++ EG   ++++YN LI GF +   + +A  ++  M + G+ 
Sbjct: 651 DYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGIS 709

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           PD I+Y+ I+  +CR+G + ++  +   M+ +G+NPD   Y  LI G      L +AF  
Sbjct: 710 PDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFEL 769

Query: 473 HDEMLQRGFVPDDA 486
            D+M++RG  P+ A
Sbjct: 770 RDDMMRRGVKPNRA 783



 Score =  287 bits (735), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 153/467 (32%), Positives = 264/467 (56%), Gaps = 9/467 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ L K   I SA   + ++++ GV P    YN LIN+ C++G L+EA  L N+M  KG
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKG 385

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TY+ LI+  CK+G+ D A   L +M ++G+      Y++L+   C+   +  A+
Sbjct: 386 LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAK 445

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM   G+ P++V +++LI  + + G+L  A   + EM   G+ P+   +T +I+G 
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA K+  EM+E   + + VTYN ++ G C+      A +L +EM+E+G+ PD 
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDT 565

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK--------PDIVTYNTLIDGFCKVGEME 292
           YT+  LI G C  G +++A    + +  +  K        P++VTY  LI+G CK+G M+
Sbjct: 566 YTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMD 625

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           KA  L  +M++    PN  +Y   ++   S G++ +A +L ++++ +G     V+ N +I
Sbjct: 626 KAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILI 684

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
           +G+C+ G   +A E L  M+  G+ PD ISY+T+I  + R  ++ +A  L   M N+G+ 
Sbjct: 685 RGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVN 744

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           PD + YN ++ G C  G +  +  +   M+ +G+ P+R+TY +LI+G
Sbjct: 745 PDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  287 bits (734), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 150/434 (34%), Positives = 244/434 (56%), Gaps = 9/434 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N++CKD K+D A+     M  KG++P+ VTY+ LI+++C+ G L+ A   +  M+  G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+ Y+SLI+G CK G+   AK + DEM+  GL P+   Y +L+   C++  +  A 
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+ +G++P+  +F+ LI       ++  A   F EM    ++P+ V Y ++I G+
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
           C+ G  + A ++ DEM+EKG V D  TY  +++GLC    ++EA +  N++         
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 235 --GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
             G  P+  T+T LI+G CK G M+KA  L   M   +  P+  TY   +D     G +E
Sbjct: 601 IEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 660

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           KA +L  D++      N ++Y ILI G+C +G + EA  +   M+  GI P  +S +TII
Sbjct: 661 KAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 719

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
             YCR GD  +A +    M++ GV+PD+++YN LI G      + KAF L   M  +G+ 
Sbjct: 720 YEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVK 779

Query: 413 PDVITYNVILTGFC 426
           P+  TYN ++ G C
Sbjct: 780 PNRATYNSLIHGTC 793



 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 147/469 (31%), Positives = 245/469 (52%), Gaps = 8/469 (1%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G+ P   T + ++N   R      A  L + +   GL+P V+ Y +++  LC+     RA
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           +EV+  M   G     ATYN  +   C+ + + EA EI   +S +G+  D+ ++ TL+  
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             +  + +       EM   G VP     + +++G  + G +  A  + +++ + G    
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +  YN ++N +C+   L EA+ LFN M  +G+FP+  T++ LI   CK G ++ AL+   
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            MT+  IK  +  Y++LI G CK+G++  A  L+ +MI+  + PN + Y  LI+GYC  G
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +  AFRL++EM GKGI P   +   +I G C +   ++A++   +MV   V P+ ++YN
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR-------MHDSELI 437
            LI G  +E N  +AF L+ +M  +GLVPD  TY  +++G C  GR       M+D +  
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594

Query: 438 LWRMIE-KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             ++ E +G  P+  TYT LING      + +A     EML    +P+ 
Sbjct: 595 QQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 643



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 230/462 (49%), Gaps = 35/462 (7%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +K  +  T+ ++ LI  Y +     +   ++  M   G+ P + T + ++NGL +  +  
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A  + DE++  GL PD   Y T +V S             CE+       D +    +I
Sbjct: 198 MALHLFDEIVSSGLRPDVYVY-TAVVRS------------LCELK------DFIRAREVI 238

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
           G                 M+S+G       Y + I G C+N  V EA+++++ +  KG  
Sbjct: 239 G----------------RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLR 282

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DV TY T++ GLC+ +     +++ NEM+E G  P     + L+ G  K GN+  A +L
Sbjct: 283 ADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDL 342

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            + + +  + P +  YN LI+  CK G++++A  L+ +M  + + PN ++Y ILI+ +C 
Sbjct: 343 VNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCK 402

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G +  A     +M   GIK T+   +++I G+C+ G    A     +M++ G+ P+ + 
Sbjct: 403 RGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVI 462

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y +LI+G+ +E  +  AF L  +M  +G+ P+  T+  +++G C   RM ++  +   M+
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           E  + P+  TY  LI GH  + N   AF   DEM+++G VPD
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPD 564



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 195/370 (52%), Gaps = 44/370 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  K+ +AK    EM   G+ P+ V Y +LI+ YC+EG L  AF+L + M+GKG
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T+ +LI+GLC   R   A ++  EM++  + P+  TYN L+   C++ N   A 
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA--------GLVPDNVL 172
           E+  EM  +G+ PD  ++  LI      G++  A  +  +++          G +P+ V 
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVT 610

Query: 173 YTIIINGYCRNGF-----------------------------------VLEALKMRDEML 197
           YT +ING C+ G                                    + +A+++ D +L
Sbjct: 611 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 670

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           E G + + VTYN ++ G C+   + EA ++   M++ G+ PD  +++T+I+ +C+ G++ 
Sbjct: 671 E-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 729

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A+ L++ M  + + PD V YN LI G C  GE+ KA +L  DM+ R + PN  +Y  LI
Sbjct: 730 EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 789

Query: 318 NGYCSMGHVT 327
           +G C M  V+
Sbjct: 790 HGTCLMSSVS 799



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 80/176 (45%)

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           + + +LI  Y       +   +   M+  GI P + + + ++ G  R      A     +
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           +VS G+ PD   Y  ++      ++  +A  ++ +ME+ G    V TYNV + G C+  R
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + ++  I   +  KGL  D  TY TL+ G       +      +EM++ GFVP +A
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEA 321


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  303 bits (777), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 164/459 (35%), Positives = 262/459 (57%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           + P  VT+NT++++ C+EG +  A ++++ M   G  P   +YN L+NGL  KG  DRAK
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           E++++M  +GL     TYN L+   C+KE   EA ++  EM  RG  P +V+++T++   
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G++  A  Y   M +  L+PD V Y  +I GY R G   EAL +  E+  K  V  V
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYNT+++G CR   L  A  + ++M++ G+ PD  TFT L+ G C+ GN+  A  LFD 
Sbjct: 383 VTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDE 442

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  + +KPD + Y T I G  K+G   KA  +  +M +    P+ I+Y +LING C +G+
Sbjct: 443 MLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGN 502

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +A  L  +M  +GI P  V+  +II  +  SG   KA+E  S M+ +G+ P  ++Y  
Sbjct: 503 FDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTV 562

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+ +     +D A     +M+++G+ P+VITYN ++ G C++  M  +  +   M  KG
Sbjct: 563 LIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKG 622

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++P++ TYT LIN + +    ++A + + +ML R   PD
Sbjct: 623 VSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPD 661



 Score =  294 bits (752), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 162/464 (34%), Positives = 261/464 (56%), Gaps = 1/464 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+++ CK+ ++  A   L  M   G  P+ V+YN L+N    +G  + A +L+  MS  G
Sbjct: 213 MMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLG 272

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK    TYN LI G CKK   + A ++  EML  G  P   TYNT++   CR   +S+A 
Sbjct: 273 LKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDAR 332

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M    + PD+VS++TLI  +SR G    AL+ F E++S  LVP  V Y  +I+G 
Sbjct: 333 RYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGG 392

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A  M+D+M++ G   DVVT+  ++ G C+   L  A +LF+EML RG+ PD 
Sbjct: 393 CRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDC 452

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TT I G  K GN +KA  + + M  +   PD++TYN LI+G CK+G  + AN+L   
Sbjct: 453 IAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQK 512

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I P++++Y  +I+ +   G + +A  ++ +M+ KGI P++V+   +I  Y   G 
Sbjct: 513 MRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGR 572

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A ++  +M  +GV P+ I+YN LI G  +E  MD A+ L ++ME++G+ P+  TY +
Sbjct: 573 LDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTI 632

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++          D+  +   M+++ + PD  T++ L+  H+S++
Sbjct: 633 LINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMK-HLSKD 675



 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/451 (33%), Positives = 245/451 (54%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           + LI  + ++  LE+   +   M   GL P V   N ++  L  K   +  +EV   M++
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
             + P   T+NT++   C++  +  A E+   M   G  P+ VS++ L+   S  G+ DR
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDR 260

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A     +M   GL      Y  +I G+C+     EA  +R EML +G +  VVTYNTI+ 
Sbjct: 261 AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMY 320

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
            LCR   +++A    + M+   + PD  ++ TLI+G+ + GN  +AL LF  +  K++ P
Sbjct: 321 SLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVP 380

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
            +VTYNTLIDG C+ G ++ A  +  DMI   + P+ +++ IL+ G+C MG++  A  L+
Sbjct: 381 SVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELF 440

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EM+ +G+KP  ++  T I G  + G+ SKA     +M +EG  PD I+YN LING  + 
Sbjct: 441 DEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKL 500

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            N D A  LV KM  +G+VPD +TY  I+      G +  +E +   M++KG++P   TY
Sbjct: 501 GNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTY 560

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           T LI+ +  +  L  A ++ DEM  +G  P+
Sbjct: 561 TVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 261/495 (52%), Gaps = 17/495 (3%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM--------- 56
            K   + + + F    +Q   +     +  +++   + GF++ A+ +M            
Sbjct: 61  VKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGV 120

Query: 57  --------SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
                    G+  +  V   + LI    KK   ++   V  +M+  GL PD    N +L 
Sbjct: 121 LDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLK 180

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
               K  ++E EE++  M +  + P IV+F+T++    + G++ RA+     M+  G  P
Sbjct: 181 LLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDP 240

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           ++V Y +++NG    G    A ++ ++M   G  +   TYN ++ G C+ +M  EA+DL 
Sbjct: 241 NDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLR 300

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            EML RG  P   T+ T+++  C+ G ++ A    D+M  + + PD+V+YNTLI G+ ++
Sbjct: 301 REMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRL 360

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G   +A  L++++ S+ + P+ ++Y  LI+G C  G++  A  +  +M+  G+ P +V+ 
Sbjct: 361 GNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTF 420

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +++G+C+ G+   A E   +M+S G+ PD I+Y T I G ++  N  KAF +  +M+ 
Sbjct: 421 TILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKA 480

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G  PD+ITYNV++ G C+ G   D+  ++ +M  +G+ PD  TYT++I+ H+    L++
Sbjct: 481 EGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRK 540

Query: 469 AFRFHDEMLQRGFVP 483
           A     +ML++G  P
Sbjct: 541 AEEVFSDMLKKGIHP 555



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 189/365 (51%), Gaps = 17/365 (4%)

Query: 137 SFSTLIGIFSRNGQLDRALMYFR---EMKSAGLVPDNV--------------LYTIIING 179
           +F  ++ I ++NG +  A        E+K  G V D +              L  ++I  
Sbjct: 87  AFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQV 146

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + +   + + L +  +M+  G + DV   N +L  L    M+ E +++++ M++  + P 
Sbjct: 147 FAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPT 206

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF T++   CK+G + +A+ + D+M      P+ V+YN L++G    GE ++A +L  
Sbjct: 207 IVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIE 266

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M    +  +  +Y  LI G+C      EA  L  EM+G+G  PT+V+ NTI+   CR G
Sbjct: 267 QMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLG 326

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S A  +L  MV+E + PD +SYNTLI G+ R  N  +A  L S++ ++ LVP V+TYN
Sbjct: 327 RVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYN 386

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G CR G +  ++ +   MI+ GL PD  T+T L+ G     NL  A    DEML R
Sbjct: 387 TLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSR 446

Query: 480 GFVPD 484
           G  PD
Sbjct: 447 GLKPD 451



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 151/292 (51%), Gaps = 8/292 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+   +  AK    EM  +G+ PD + Y T I    + G   +AF +   M  +G
Sbjct: 423 LVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEG 482

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN LINGLCK G  D A E++ +M   G+ PD  TY +++        + +AE
Sbjct: 483 FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAE 542

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F +M ++G+ P +V+++ LI  ++  G+LD A  YF EM+  G+ P+ + Y  +I G 
Sbjct: 543 EVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGL 602

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A  +  EM  KG   +  TY  ++N     +   +A  L+ +ML+R + PD 
Sbjct: 603 CKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDS 662

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT--LIDGFCKVGE 290
            T + L+       +++K   L  ++  +++   IV  N+  + +GF K+ E
Sbjct: 663 CTHSALMK------HLSKDYKLLAVLRLENLPLAIVEINSTWIAEGFVKLEE 708



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%)

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + LI  F ++  ++K   +  KM N GL+PDV   N +L     +  +++ E +   MI+
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             + P   T+ T+++    +  +  A    D M   G  P+D 
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDV 243


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  303 bits (777), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 154/484 (31%), Positives = 273/484 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K+  A   + ++ + G  P+T+T++TLIN  C EG + EA +L++ M   G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + T N+L+NGLC  G+   A  ++D+M++ G  P+  TY  +L   C+    + A 
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M  R +  D V +S +I    ++G LD A   F EM+  G+  + + Y I+I G+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +  K+  +M+++    +VVT++ +++   +   L EA++L  EM+ RG+ PD 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI G CK+ +++KA  + D+M  K   P+I T+N LI+G+CK   ++   +L+  
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  + ++Y  LI G+C +G +  A  L+ EMV + + P +V+   ++ G C +G+
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + KA E   K+    ++ D   YN +I+G      +D A+ L   +  +G+ P V TYN+
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G + ++EL+  +M E G  PD  TY  LI  H+   +  ++ +  +E+ + G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608

Query: 481 FVPD 484
           F  D
Sbjct: 609 FSVD 612



 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 258/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + +A+ K  + D       +ME KG+  +  T + +IN +CR   L  AF  M  +   G
Sbjct: 94  LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+++LINGLC +GR   A E++D M++MG  PD  T NTL+   C     +EA 
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G  P+ V++  ++ +  ++GQ   A+   R+M+   +  D V Y+III+G 
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  A  + +EM  KG   +++TYN ++ G C A    +   L  +M++R + P+ 
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ LI    K+G + +A  L   M  + I PD +TY +LIDGFCK   ++KAN++   
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+   PN  ++ ILINGYC    + +   L+ +M  +G+    V+ NT+I+G+C  G 
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E   +MVS  V P+ ++Y  L++G       +KA  +  K+E   +  D+  YN+
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+ G C   ++ D+  +   +  KG+ P   TY  +I G   +  L EA     +M + G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573

Query: 481 FVPD 484
             PD
Sbjct: 574 HAPD 577



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 237/436 (54%), Gaps = 1/436 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LC   K   A + + +M + G  P+ VTY  ++N  C+ G    A +L+  M  + 
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y+ +I+GLCK G  D A  + +EM   G++ +  TYN L+   C      +  
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M +R + P++V+FS LI  F + G+L  A    +EM   G+ PD + YT +I+G+
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A +M D M+ KGC  ++ T+N ++NG C+A  + +  +LF +M  RGV  D 
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G C+ G +N A  LF  M  + + P+IVTY  L+DG C  GE EKA +++  
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+  +   Y I+I+G C+   V +A+ L+  +  KG+KP + + N +I G C+ G 
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A+    KM  +G  PD  +YN LI   + + +  K+  L+ +++  G   D  T  +
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618

Query: 421 ILTGFCRQGRMHDSEL 436
           ++      GR+  S L
Sbjct: 619 VID-MLSDGRLKKSFL 633



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 238/460 (51%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           F CE          ++Y   + +   +   ++A  L   M      P V  ++ L + + 
Sbjct: 40  FCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIA 99

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K  + D    +  +M   G++ +  T + ++   CR   +  A     ++ + G  P+ +
Sbjct: 100 KTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTI 159

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +FSTLI      G++  AL     M   G  PD +    ++NG C +G   EA+ + D+M
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           +E GC  + VTY  +LN +C++     A +L  +M ER +  D   ++ +I G CK G++
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A NLF+ M  K I  +I+TYN LI GFC  G  +   KL  DMI RKI+PN +++ +L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+ +   G + EA  L  EM+ +GI P  ++  ++I G+C+     KA++ +  MVS+G 
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
           DP+  ++N LING+ +   +D    L  KM  +G+V D +TYN ++ GFC  G+++ ++ 
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +   M+ + + P+  TY  L++G       ++A    +++
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 247/476 (51%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D K D A     +M      P  + ++ L +A  +    +    L   M  KG+   ++T
Sbjct: 66  DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            + +IN  C+  +   A   + +++++G  P+T T++TL+   C +  +SEA E+   M 
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G  PD+++ +TL+     +G+   A++   +M   G  P+ V Y  ++N  C++G   
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A+++  +M E+   +D V Y+ I++GLC+   L  A +LFNEM  +G+  +  T+  LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G C  G  +    L   M ++ I P++VT++ LID F K G++ +A +L  +MI R I+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ I+Y  LI+G+C   H+ +A ++   MV KG  P + + N +I GYC++       E 
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             KM   GV  D+++YNTLI GF     ++ A  L  +M ++ + P+++TY ++L G C 
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            G    +  I  ++ +  +  D   Y  +I+G  + + + +A+     +  +G  P
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 220/405 (54%)

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + D A ++  +M+     P    ++ L     + +       +  +M  +G+A ++ + S
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            +I  F R  +L  A     ++   G  P+ + ++ +ING C  G V EAL++ D M+E 
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   D++T NT++NGLC +    EA  L ++M+E G  P+  T+  +++  CK G    A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + L   M +++IK D V Y+ +IDG CK G ++ A  L+ +M  + I+ N I+Y ILI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C+ G   +  +L  +M+ + I P +V+ + +I  + + G   +A+E   +M+  G+ PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +I+Y +LI+GF +E ++DKA  +V  M ++G  P++ T+N+++ G+C+  R+ D   +  
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +M  +G+  D  TY TLI G      L  A     EM+ R   P+
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 150/452 (33%), Positives = 258/452 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C    +D     L ++ + G+ P  +T+ TLIN  C+ G   +A +L + M  +G
Sbjct: 132 LINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG 191

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V+TY ++INGLCK G    A  ++ +M ++G  PD  TY+TL+   C+   ++EA 
Sbjct: 192 CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEAL 251

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M  +G++P +VS+++LI       +   A     EM S  ++PD V ++++I+ +
Sbjct: 252 DIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIF 311

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G VLEA  +   M E G   +V+TYN++++G      + EA  LF+ M+ RG  PD 
Sbjct: 312 CKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDV 371

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++++ LI+G+C    +++A  LF+ M  + + P+ V+Y TLI  FC++G++ +A +L+ D
Sbjct: 372 FSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKD 431

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +    P+  +Y +L+ G+C  G++ +AFRL+  M G  +KP LV    +I   C+SG+
Sbjct: 432 MHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGN 491

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A +  S++   G+ PD   Y T+ING  +E  +D+A     KME  G  P+  +YNV
Sbjct: 492 LNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNV 551

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           I+ GF +      +  ++  M +KG   D  T
Sbjct: 552 IIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 254/467 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME  G+ P+T T N LIN +C    ++  F ++  +   GL+P + T+ +LINGLCK G
Sbjct: 116 QMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAG 175

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +A E+ D+M+  G  PD  TY T++   C+    + A  +  +M   G  PD+V++S
Sbjct: 176 EFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYS 235

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TLI    ++  ++ AL  F  MK+ G+ P  V YT +I G C      EA  M +EM   
Sbjct: 236 TLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL 295

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + D+VT++ +++  C+   + EA  +   M E GV P+  T+ +L+HG+     + +A
Sbjct: 296 NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEA 355

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             LFD+M  +  KPD+ +Y+ LI+G+C V  +++A +L+ +MI + ++PN +SY  LI+ 
Sbjct: 356 RKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C +G + EA  L+ +M   G  P L + + +++G+C+ G   KA      M    + P+
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN 475

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            + Y  LI+   +  N++ A  L S++   GL PDV  Y  I+ G C++G + ++     
Sbjct: 476 LVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFR 535

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +M E G  P+  +Y  +I G +   +   A +   EM  +GFV D+ 
Sbjct: 536 KMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEG 582



 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 153/476 (32%), Positives = 249/476 (52%), Gaps = 1/476 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR-EGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ID A      M  +   P  + +N L++A  R   + +    L   M   GL P   T N
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LIN  C     D    VL +++++GL P   T+ TL+   C+    ++A E+F +M  R
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  PD+ +++T+I    + G+   A    ++M   G  PD V Y+ +I+  C++  V EA
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           L +   M  KG    VV+Y +++ GLC      EA  + NEM    + PD  TF+ LI  
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK+GN+ +A  +   MT+  ++P+++TYN+L+ G+    E+ +A KL+  MI+R   P+
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             SY ILINGYC +  + EA +L+ EM+ +G+ P  VS  T+I  +C+ G   +A E   
Sbjct: 371 VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFK 430

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M + G  PD  +Y+ L+ GF ++  + KAF L   M+   L P+++ Y +++   C+ G
Sbjct: 431 DMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSG 490

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            ++ +  +   +   GL PD   YTT+ING   +  L EA     +M + G  P++
Sbjct: 491 NLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNE 546


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  303 bits (776), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 167/491 (34%), Positives = 270/491 (54%), Gaps = 13/491 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  + D+      +M  +G  P+ VTY TLI+  CR+G   +AF+L + M  K 
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V  Y  LI GLC + R   A+ +   M   G+ P+  TYNT++   C+  ++ +A 
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++ EM   G+ P++V+F  LI    +  ++  A  +  +M S G+VP+  +Y  +I+GY
Sbjct: 284 ELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EAL +  E+ +   + DV TY+ ++ GLC    + EAD L  EM ++G  P+ 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G+CK+GNM KA+ +   MT+K I+P+I+T++TLIDG+CK G+ME A  L+ +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+ ++Y  LI+G+   G+  EAFRL  EM   G+ P + + + +I G C+ G 
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523

Query: 361 ASKADE-FLSKMVSEGV------------DPDSISYNTLINGFVREENMDKAFALVSKME 407
            S A + FL+K  ++               P+ + Y  LI G   +  + KA    S M 
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMR 583

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             GL PDV T  VI+ G  R   + D  ++   +++ G+ P+ S Y  L  G+     LK
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLK 643

Query: 468 EAFRFHDEMLQ 478
            A  F  E +Q
Sbjct: 644 SALSFCGEGVQ 654



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 153/480 (31%), Positives = 265/480 (55%), Gaps = 18/480 (3%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           L  +E     P+   +  LI A+   G +EEA  +   M    + P +   N +++GL K
Sbjct: 116 LSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVK 170

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           KGR D   +V  +M+  G SP+  TY TL+   CR+ +  +A  +F EM  + + P +V 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ LI       ++  A   FR M+++G++P+   Y  +++GYC+   V +AL++  EML
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML 290

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G + +VVT+  +++GLC+   +  A     +M   GV P+ + +  LI G+CK GN++
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +AL+L   + +  I PD+ TY+ LI G C V  ME+A+ L  +M  +   PN ++Y  LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +GYC  G++ +A  +  +M  KGI+P +++ +T+I GYC++G    A    ++MV +G+ 
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS-EL 436
           PD ++Y  LI+G  ++ N  +AF L  +M+  GL P+V T + ++ G C+ GR+ D+ +L
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 437 ILWRM-----------IEKGL-NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            L +            +++ L +P+   YT LI G  +   + +A +F  +M   G  PD
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590



 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 248/474 (52%), Gaps = 13/474 (2%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P     N +++   ++G  +  +++   M  +G  P V TY +LI+G C++G   +A 
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            + DEM++  + P    Y  L+   C +  +SEAE +F  M   G+ P++ +++T++  +
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +   + +AL  + EM   GL+P+ V + I+I+G C+   ++ A K   +M   G V ++
Sbjct: 274 CKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN +++G C+A  L+EA  L +E+ +  + PD +T++ LI G C    M +A  L   
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +K   P+ VTYNTLIDG+CK G MEKA ++ + M  + I PN I++  LI+GYC  G 
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  L+ EMV KG+ P +V+   +I G+ + G+  +A     +M   G+ P+  + + 
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513

Query: 386 LINGFVREENMDKAFAL-------------VSKMENQGLVPDVITYNVILTGFCRQGRMH 432
           LI+G  ++  +  A  L              ++++     P+ + Y  ++ G C  GR+ 
Sbjct: 514 LIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIF 573

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            +      M   GL PD  T   +I GH    +L++      ++L+ G +P+ +
Sbjct: 574 KASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSS 627



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 243/509 (47%), Gaps = 39/509 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++ SA+ FL +M   GV P+   YN LI+ YC+ G L EA  L + +    
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY+ LI GLC   R + A  +L EM + G  P+  TYNTL+   C++ NM +A 
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M+ +G+ P+I++FSTLI  + + G+++ A+  + EM   GL+PD V YT +I+G+
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF------------ 228
            ++G   EA ++  EM E G   +V T + +++GLC+   +++A  LF            
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSK 543

Query: 229 -NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
            NE+      P+   +T LI G C DG + KA   F  M    ++PD+ T   +I G  +
Sbjct: 544 TNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR 603

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP---- 343
              +     L AD++   I PN   Y +L  GY   G++  A        G+G++P    
Sbjct: 604 AMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSAL----SFCGEGVQPLDRV 659

Query: 344 --------TLVS----CNTIIKGYCRS------GDASKADEFLSKMVSEGVDPDSISYNT 385
                   T+ S    C    K  C S      G  S    +    + +   P  I    
Sbjct: 660 NSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKV 719

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
              G   ++  +KA  L  +M+     PD++T  V L+     G +   E I   +  +G
Sbjct: 720 PFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRG 779

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           L+ D     +LIN +     +  A R  D
Sbjct: 780 LDTDLCLNNSLINMYSKCGEIGTARRLFD 808



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 121/579 (20%), Positives = 220/579 (37%), Gaps = 137/579 (23%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++  CK  K+++A     EM  KG+ PD V Y  LI+ + ++G  +EAF+L   M   G
Sbjct: 444  LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 61   LKPGVFT------------------------------------------------YNSLI 72
            L P VFT                                                Y +LI
Sbjct: 504  LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563

Query: 73   NGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA 132
             GLC  GR  +A +   +M   GL PD  T   ++    R  ++ +   +  ++ + G+ 
Sbjct: 564  QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGII 623

Query: 133  PDIVSFSTLIGIFSRNG--------------QLDRA------------------------ 154
            P+   +  L   +  +G               LDR                         
Sbjct: 624  PNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKE 683

Query: 155  ----------------LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
                            L YF  +      P  +L  +   G   +    +AL++  +M  
Sbjct: 684  CHSSYLTAFGIHSFVLLWYFHTILKPP-SPHEILKKVPFIGQKGDQRPNKALQLFRQMQM 742

Query: 199  KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
                 D+VT    L+       L   + +   +  RG+  D     +LI+ + K G +  
Sbjct: 743  DDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGT 802

Query: 259  ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI-----SRK-------- 305
            A  LFD  TQK    D+ T+ ++I G    G+ E+A +L+ +M      +RK        
Sbjct: 803  ARRLFD-GTQKK---DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXE 858

Query: 306  ---ISPNYISY-GILINGYCSMGHVTEAFRLWYEMVGK--GIKPTLVSCNTIIKGYCRSG 359
               + PN +++ G+L+   CS   + E  +  +  + +   ++P +     ++   CR+G
Sbjct: 859  SSLVLPNDVTFMGVLMA--CSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAG 916

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE----ENMDKAFALVSKMENQ--GLVP 413
              ++A EF+ KM    V P+++ + TL+     +     N +    + S+   Q   L P
Sbjct: 917  LLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIXSEARRQLLELEP 973

Query: 414  DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              +  NVI++       M D ++++   I++  +P  S+
Sbjct: 974  SHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQRRDPGCSS 1012



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/301 (20%), Positives = 124/301 (41%), Gaps = 34/301 (11%)

Query: 48   EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
            +A QL   M     +P + T    ++     G  D  + +   +   GL  D    N+L+
Sbjct: 732  KALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLI 791

Query: 108  VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK----- 162
                +   +  A  +F    ++    D+ +++++I   + +GQ + AL  F EMK     
Sbjct: 792  NMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKR 847

Query: 163  -----------SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT-YNT 210
                       S+ ++P++V +  ++      G V E  +    M E   +   ++ +  
Sbjct: 848  ARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGC 907

Query: 211  ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC-----KDGNMNKALNLFDI 265
            +++ LCRA +LTEA   +  +L+  V P+   + TL+ G C      +GN N  + +   
Sbjct: 908  MVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLL-GACSLQGDSNGNGNSNIKIXSE 963

Query: 266  MTQK--SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP--NYISYGILINGYC 321
              ++   ++P  V  N ++        M     L  + I ++  P  + I  GI I  + 
Sbjct: 964  ARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQRRDPGCSSIEVGIDIKEFV 1023

Query: 322  S 322
            +
Sbjct: 1024 A 1024


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  303 bits (776), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 151/463 (32%), Positives = 262/463 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV P+  TYN++++ YC  G  +EA   +  M   G
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYNSL++ LCK GRC  A+++ D M + GL P+  TY TLL     K  + E  
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 359

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ P+   FS LI  +++ G++D+A++ F +M+  GL PD V Y  +I   
Sbjct: 360 GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A++  ++M+++      + YN++++ LC      +A +L  EML+RG+  D 
Sbjct: 420 CKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDT 479

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I  HCK+G + ++  LFD+M +  +KPDI+TY+TLIDG+C  G+M++A KL A 
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 539

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++Y  LINGYC +  + +A  L+ EM   G+ P +++ N I++G  ++  
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    +   G   +  +YN +++G  +    D+A  +   +    L  +  T+N+
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           ++    + GR  +++ +   +   GL PD  TY+ +    + Q
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702



 Score =  297 bits (760), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 163/514 (31%), Positives = 269/514 (52%), Gaps = 38/514 (7%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC D +  D+  + L  M Q G  P+  +YN L+   C E   +EA +L+  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 60  G--LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V +Y ++ING  K+G  D+A     EML  G+ P+  TY++++   C+ + M 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A E+   M + GV P+  ++++++  +  +GQ   A+ + ++M S G+ PD V Y  ++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  C+NG   EA KM D M ++G   ++ TY T+L G      L E   L + M+  G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+ Y F+ LI  + K G +++A+ +F  M Q+ + PD VTY T+I   CK G +E A + 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 298 WADMISRKISPNYISY--------------------------GI---------LINGYCS 322
           +  MI  ++SP  I Y                          GI         +I+ +C 
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V E+ +L+  MV  G+KP +++ +T+I GYC +G   +A + L+ MVS G+ PD ++
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNTLING+ +   M+ A  L  +ME+ G+ PD+ITYN+IL G  +  R   ++ +   + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           E G   + STY  +++G    N   EA R    +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/462 (32%), Positives = 246/462 (53%), Gaps = 3/462 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P+  TY  LI + C  G L+  F  + ++  KG +     +  L+ GLC   R   A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG--VAPDIVSFSTLI 142
           + VL  M Q+G  P+  +YN LL   C +    EA E+   M   G    PD+VS++T+I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F + G LD+A   + EM   G++P+ V Y+ II   C+   + +A+++   M++ G +
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            +  TYN+I++G C +    EA     +M   GV PD  T+ +L+   CK+G   +A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           FD MT++ +KP+I TY TL+ G+   G + + + L   M+   I PN+  + ILI  Y  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V +A  ++ +M  +G+ P  V+  T+I   C+SG    A  +  +M+ E + P +I 
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN+LI+     +  DKA  L+ +M ++G+  D I +N I+   C++GR+ +SE +   M+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             G+ PD  TY+TLI+G+     + EA +    M+  G  PD
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 242/504 (48%), Gaps = 70/504 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C   +   A  FL +M   GV PD VTYN+L++  C+ G   EA ++ +SM+ +G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 61  LKPGVFTYNSLING--------------------------------LC---KKGRCDRAK 85
           LKP + TY +L+ G                                +C   K+G+ D+A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            V  +M Q GL+PDT TY T                                   +IGI 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGT-----------------------------------VIGIL 419

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            ++G+++ A+ YF +M    L P N++Y  +I+  C      +A ++  EML++G  +D 
Sbjct: 420 CKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDT 479

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           + +N+I++  C+   + E++ LF+ M+  GV PD  T++TLI G+C  G M++A  L   
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 539

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    +KPD VTYNTLI+G+CK+  ME A  L+ +M S  +SP+ I+Y I++ G      
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              A  L+  +   G +  L + N I+ G C++    +A      +    +  ++ ++N 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I   ++    D+A  L + +   GLVPDV TY+++      QG + + + +   M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 446 LNPDRSTYTTLINGHVSQNNLKEA 469
              +     +++   + + ++  A
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRA 743



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 200/368 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K  K+D A +   +M Q+G+ PDTVTY T+I   C+ G +E+A +    M  + 
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG   YNSLI+ LC   + D+AKE++ EML  G+  DT  +N+++   C++  + E+E
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV PDI+++STLI  +   G++D A      M S G+ PD V Y  +INGY
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM   G   D++TYN IL GL + +    A +L+  + E G   + 
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   ++AL +F  +    ++ +  T+N +I    KVG  ++A  L+A 
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +  + P+  +Y ++       G + E   L+  M   G        N+I++   + GD
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 361 ASKADEFL 368
            ++A  +L
Sbjct: 740 ITRAGTYL 747



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 38/218 (17%)

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK---------------------- 342
           +++PN  +YGILI   C  G +   F     ++ KG +                      
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 343 --------------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSISYNTL 386
                         P + S N ++KG C    + +A E L  M  +G D  PD +SY T+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           INGF +E ++DKA+    +M ++G++P+V+TY+ I+   C+   M  +  +L  M++ G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+  TY ++++G+ S    KEA  F  +M   G  PD
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  303 bits (776), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 158/496 (31%), Positives = 270/496 (54%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G++PD VT+NTL++  C E  + EA  L + M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T+ +L+NGLC++GR   A  +LD M++ GL P   TY T++   C+K +   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 121 EIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M     + P++V +S +I    ++G+   A   F EM+  G+ PD   Y  +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   +A ++  EMLE+    DVVTYN ++N   +     EA++L++EML RG+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++++I G CK   ++ A ++F +M  K   P+++T+NTLIDG+C    ++   +L  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    +  +  +Y  LI+G+  +G +  A  L  EM+  G+ P +V+C+T++ G C +G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 360 DASKADEFLSKMVSE-----------GVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
               A E    M              GV+PD  +YN LI+G + E    +A  L  +M +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+VPD ITY+ ++ G C+Q R+ ++  +   M  K  +P+  T+TTLING+     + +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 469 AFRFHDEMLQRGFVPD 484
                 EM +RG V +
Sbjct: 600 GLELFCEMGRRGIVAN 615



 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 152/470 (32%), Positives = 256/470 (54%), Gaps = 14/470 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  L+    R    +    L   M  K ++  ++++  LI   C   +   A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++ ++GL PD  T+NTLL   C ++ +SEA  +F +M      P++V+F+TL+    R
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVV 206
            G++  A+     M   GL P  + Y  I++G C+ G  + AL +  +M E   ++ +VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            Y+ I++ LC+    ++A +LF EM E+G+FPD +T+ ++I G C  G  + A  L   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ I PD+VTYN LI+ F K G+  +A +L+ +M+ R I PN I+Y  +I+G+C    +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  ++Y M  KG  P L++ NT+I GYC +       E L +M   G+  D+ +YNTL
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-- 444
           I+GF    +++ A  L+ +M + GL PD++T + +L G C  G++ D+ L ++++++K  
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA-LEMFKVMQKSK 495

Query: 445 ----------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                     G+ PD  TY  LI+G +++    EA   ++EM  RG VPD
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 264/481 (54%), Gaps = 12/481 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++N LC++ +I  A   L  M + G+ P  +TY T+++  C++G    A  L+  M    
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P V  Y+++I+ LCK GR   A+ +  EM + G+ PD  TYN+++V  C     S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E++  EM  R ++PD+V+++ LI  F + G+   A   + EM   G++P+ + Y+ +I+G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +  A  M   M  KGC  +++T+NT+++G C AK + +  +L +EM E G+  D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIHG    G++N AL+L   M    + PDIVT +TL+DG C  G+++ A +++ 
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+  +Y ILI+G  + G   EA  L+ EM  +GI P  ++ 
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G C+     +A +    M S+   P+ +++ TLING+ +   +D    L  +M  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V + ITY  ++ GF + G ++ +  I   MI  G+ PD  T   ++ G  S+  LK 
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 469 A 469
           A
Sbjct: 670 A 670



 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 139/418 (33%), Positives = 241/418 (57%), Gaps = 11/418 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCKD +   A+    EM++KG++PD  TYN++I  +C  G   +A QL+  M  + 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LIN   K+G+   A+E+ DEML  G+ P+T TY++++   C++  +  AE
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+ +G +P++++F+TLI  +    ++D  +    EM   GLV D   Y  +I+G+
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
              G +  AL +  EM+  G   D+VT +T+L+GLC    L +A ++F  M +       
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 235 -----GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                GV PD  T+  LI G   +G   +A  L++ M  + I PD +TY+++IDG CK  
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A +++  M S+  SPN +++  LINGYC  G V +   L+ EM  +GI    ++  
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           T+I G+ + G+ + A +   +M+S GV PD+I+   ++ G   +E + +A A++ K++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 211/372 (56%), Gaps = 1/372 (0%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +A ++F +M R    P +V F  L+G+  R  + D  +  +++M+   +  D   +
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           TI+I  +C    +  AL    ++ + G   DVVT+NT+L+GLC    ++EA +LF++M E
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
               P+  TFTTL++G C++G + +A+ L D M +  ++P  +TY T++DG CK G+   
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 294 ANKLWADMIS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           A  L   M     I PN + Y  +I+  C  G  ++A  L+ EM  KGI P L + N++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G+C SG  S A++ L +M+   + PD ++YN LIN FV+E    +A  L  +M  +G++
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+ ITY+ ++ GFC+Q R+  +E + + M  KG +P+  T+ TLI+G+     + +    
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 473 HDEMLQRGFVPD 484
             EM + G V D
Sbjct: 418 LHEMTETGLVAD 429



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 55/340 (16%)

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  GF  E+LK++                   +G    K L +A DLF++ML     P  
Sbjct: 39  CEAGFGGESLKLQ-------------------SGFHEIKGLEDAIDLFSDMLRSRPLPSV 79

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  L+    +    +  ++L+  M +K I+ DI ++  LI  FC   ++  A   +  
Sbjct: 80  VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGK 139

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+ +++  L++G C    V+EA  L+++M     +P +V+  T++ G CR G 
Sbjct: 140 LTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME------------- 407
             +A   L +M+ +G+ P  I+Y T+++G  ++ +   A  L+ KME             
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 408 -----------------------NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
                                   +G+ PD+ TYN ++ GFC  GR  D+E +L  M+E+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++PD  TY  LIN  V +    EA   +DEML RG +P+
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  303 bits (776), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 161/461 (34%), Positives = 259/461 (56%), Gaps = 3/461 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK--GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++++ CK  ++D A   L +ME +  G  P+ VTYN +IN   R+G LE+A QL++ M  
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRL 294

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
              K   FTYN LI GL  +   ++A  +L EM   G+ P   TYNTL+    +  N   
Sbjct: 295 SK-KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEA 353

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A+  F EM  +G+ PD++++++LI  + + G L +AL  F ++K AGL P  + Y I+I+
Sbjct: 354 AQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILID 413

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYCR G +  A ++++EM E+ C+ DV TY  ++NG C  + L      F+EML +G+ P
Sbjct: 414 GYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D + + T I      G +  A  L + M  + I  D VTYN LIDG CK G ++ A  LW
Sbjct: 474 DCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLW 533

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M++  +  + ++Y  LI+ +C  G + EA  ++  MV  G+ P++V+    I  YCR 
Sbjct: 534 MKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRR 593

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+   A  +  KM+ EGV+P+ ++YN L++   R    + A+    +M  +GLVP+  TY
Sbjct: 594 GNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTY 653

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            +++ G C++G    +  +   M +KG++PD  T+  L  G
Sbjct: 654 TLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKG 694



 Score =  300 bits (769), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 157/477 (32%), Positives = 259/477 (54%), Gaps = 3/477 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK--GLKPGVFT 67
           + D  +    +M Q GV P   TYNTL++++C+ G +++A  L+  M  +  G  P   T
Sbjct: 209 RWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVT 268

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           YN +INGL +KG  ++A +++D ++++       TYN L+     ++ + +A  +  EM 
Sbjct: 269 YNVVINGLARKGELEKAAQLVD-IMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEME 327

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G+ P +V+++TLI    + G  + A + F EM++ GL+PD + Y  +INGYC+ G + 
Sbjct: 328 NEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLK 387

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           +AL +  ++   G    V+TYN +++G CR   L  A  L  EM E    PD  T+T L+
Sbjct: 388 QALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILM 447

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +G C   N+      FD M  K ++PD   YNT I     +G +  A +L  +M+ R IS
Sbjct: 448 NGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGIS 507

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            + ++Y +LI+G C  G + +A+ LW +MV  G++   V+   +I  +C  G   +A   
Sbjct: 508 SDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNI 567

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
              MV+ G+ P  ++Y   I+ + R  N+  A+    KM  +G+ P+ +TYNV++   CR
Sbjct: 568 FDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCR 627

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GR   +      M+E+GL P++ TYT LI+G   + N   A R + EM Q+G  PD
Sbjct: 628 MGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPD 684



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 236/439 (53%), Gaps = 6/439 (1%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           AFQ    M+  G+ P V   N ++  L    R D  + V  +MLQ+G+ P   TYNTLL 
Sbjct: 181 AFQ---EMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLD 237

Query: 109 ESCRKENMSEAEEIFCEMSRR--GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
             C+   M +A  +  +M  R  G  P+ V+++ +I   +R G+L++A      M+ +  
Sbjct: 238 SFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKK 297

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
                 Y  +I G     FV +A  +  EM  +G V  VVTYNT+++GL +      A  
Sbjct: 298 A-SAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQV 356

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
            F+EM  +G+ PD  T+ +LI+G+CK GN+ +AL LF  + +  + P ++TYN LIDG+C
Sbjct: 357 KFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC 416

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           ++G++E A +L  +M      P+  +Y IL+NG C + ++      + EM+ KG++P   
Sbjct: 417 RLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCF 476

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + NT I      G  + A +   +M+  G+  D+++YN LI+G  +  ++  A+ L  KM
Sbjct: 477 AYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKM 536

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
              GL  D +TY  ++   C +GR+ +++ I   M+  GL+P   TYT  I+ +  + NL
Sbjct: 537 VTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNL 596

Query: 467 KEAFRFHDEMLQRGFVPDD 485
             A+ +  +ML+ G  P++
Sbjct: 597 YLAYGWFRKMLEEGVEPNE 615



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 205/390 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L     ++ A   L EME +G+ P  VTYNTLI+   + G  E A    + M  KG
Sbjct: 306 LITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKG 365

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + TYNSLING CK G   +A  +  ++ + GL P   TYN L+   CR  ++  A 
Sbjct: 366 LLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGAR 425

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+     PD+ +++ L+        L    ++F EM S GL PD   Y   I+  
Sbjct: 426 RLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAE 485

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G +  A ++R+EM+ +G   D VTYN +++GLC+   L +A  L+ +M+  G+  D 
Sbjct: 486 LTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDC 545

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LIH HC+ G + +A N+FD M    + P +VTY   I  +C+ G +  A   +  
Sbjct: 546 VTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRK 605

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN ++Y +L++  C MG    A++ ++EM+ +G+ P   +   +I G C+ G+
Sbjct: 606 MLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGN 665

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF 390
              A     +M  +G+ PD  ++N L  GF
Sbjct: 666 WVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 162/299 (54%), Gaps = 3/299 (1%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           + L    EM   G    V   N +L  L  A    +   ++++ML+ GV P  +T+ TL+
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIK--PDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
              CK G M++A+ L   M  ++    P+ VTYN +I+G  + GE+EKA +L  D++   
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQL-VDIMRLS 295

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
              +  +Y  LI G  +   V +A  L  EM  +GI PT+V+ NT+I G  ++G+A  A 
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
               +M ++G+ PD I+YN+LING+ +  N+ +A  L   ++  GL P V+TYN+++ G+
Sbjct: 356 VKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGY 415

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           CR G +  +  +   M E+   PD  TYT L+NG     NL     F DEML +G  PD
Sbjct: 416 CRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPD 474



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 114/213 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM  +G+  DTVTYN LI+  C+ G L++A+ L   M   GL+    TY  LI+  C++G
Sbjct: 500 EMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERG 559

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   AK + D M+  GLSP   TY   +   CR+ N+  A   F +M   GV P+ V+++
Sbjct: 560 RLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYN 619

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            L+    R G+ + A  +F EM   GLVP+   YT++I+G C+ G  + A+++  EM +K
Sbjct: 620 VLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQK 679

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           G   D  T+N +  G     M      L N +L
Sbjct: 680 GIHPDHCTHNALFKGFGEGHMYDAVQYLENVVL 712


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 160/486 (32%), Positives = 267/486 (54%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ L K  + D ++ F  +M   G+ P   TYN +I   C+EG +  A  L   M   GL
Sbjct: 104 LHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGL 163

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P + TYN+LI+G  K G  D +  + +EM  MG  PD  TYN L+   C+ + M  A E
Sbjct: 164 TPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFE 223

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
            F EM  + + P+++S+STLI    + G +  A+ +F +M   GL+P+   Y+ +I+  C
Sbjct: 224 FFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANC 283

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G + EA  + DEML++   +++VTY T+L+GLC   M+ EA++LF  M + GV P+  
Sbjct: 284 KAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQ 343

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +T LIHGH K  +M+KA+ LF+ M +K IKPDI+ + T++ G C   ++E+   +  +M
Sbjct: 344 AYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEM 403

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
               I  N + Y  L++ Y   G+ TEA  L  EM   G + T+V+   +I G C+ G  
Sbjct: 404 KESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLV 463

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A  +  +M    + P+   Y  LI+G  +   +  A  L  +M+++ ++PD I Y  +
Sbjct: 464 QEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAM 523

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + G  + G   ++  +  +M+E G+  D   YT+L+ G      +++A +F  EM+ +G 
Sbjct: 524 IDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGI 583

Query: 482 VPDDAF 487
           +PD+  
Sbjct: 584 IPDETL 589



 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 249/457 (54%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++ L +     G LE A Q    M+   + P   + N+ ++ L K G  D +++ 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M+  G++P   TYN ++   C++ +M  A  +F +M + G+ PDIV+++TLI  + +
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G LD ++  F EMK  G  PD + Y  +IN +C+   +L A +   EM +K    +V++
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T+++ LC+  M+  A   F +M   G+ P+ +T+++LI  +CK GN+ +A  L D M 
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q+ +  +IVTY TL+DG C+ G M +A +L+  M    ++PN  +Y  LI+G+  +  + 
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMD 359

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EM  K IKP ++   TI+ G C      +    +++M   G+  + + Y TL+
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLM 419

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           + + +  N  +A  L+ +M + G    V+T+  ++ G C++G + ++     RM +  L 
Sbjct: 420 DAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQ 479

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+ + YT LI+G    N + +A +  DEM  +  +PD
Sbjct: 480 PNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPD 516



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 246/482 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  +CK+  + +A+    +M++ G+ PD VTYNTLI+ Y + G L+E+  L   M   G
Sbjct: 138 MIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMG 197

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN+LIN  CK     RA E   EM    L P+  +Y+TL+   C++  M  A 
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAI 257

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F +M+R G+ P+  ++S+LI    + G L  A M   EM    +  + V YT +++G 
Sbjct: 258 KFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGL 317

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA ++   M + G   ++  Y  +++G  + + + +A +LFNEM E+ + PD 
Sbjct: 318 CEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDI 377

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T++ G C +  + +   +   M +  I  + V Y TL+D + K G   +A  L  +
Sbjct: 378 LLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEE 437

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M         +++  LI+G C  G V EA   +  M    ++P +     +I G C++  
Sbjct: 438 MRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNC 497

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   +M  + + PD I+Y  +I+G ++  N  +A  + +KM   G+  D+  Y  
Sbjct: 498 IGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTS 557

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + G++  +   L  MI KG+ PD +  T L+  H    N+ EA    +E++++G
Sbjct: 558 LVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617

Query: 481 FV 482
            +
Sbjct: 618 LI 619



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 144/319 (45%), Gaps = 35/319 (10%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV     ++ + + L    ML  A   F  M +  V P   +    +H   K G  + + 
Sbjct: 58  CVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSR 117

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           + F  M    I P + TYN +I   CK G+M  A  L+  M    ++P+ ++Y  LI+GY
Sbjct: 118 DFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGY 177

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G + E+  L+ EM   G +P +++ N +I  +C+     +A EF  +M  + + P+ 
Sbjct: 178 GKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVP--------------------------- 413
           ISY+TLI+   +E  M  A      M   GL+P                           
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297

Query: 414 --------DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
                   +++TY  +L G C +G M+++E +   M + G+ P+   YT LI+GH+   +
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           + +A    +EM ++   PD
Sbjct: 358 MDKAMELFNEMREKDIKPD 376



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 2/227 (0%)

Query: 261 NLFDIM--TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           ++F+I+  T+    P    ++ L     ++G +E A + +  M   ++ P   S    ++
Sbjct: 46  DVFEILWTTRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLH 105

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
                G    +   + +MVG GI PT+ + N +I   C+ GD   A     +M   G+ P
Sbjct: 106 RLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTP 165

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D ++YNTLI+G+ +   +D++  L  +M+  G  PDVITYN ++  FC+   M  +    
Sbjct: 166 DIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFF 225

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M +K L P+  +Y+TLI+    +  ++ A +F  +M + G +P++
Sbjct: 226 REMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNE 272



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 78/170 (45%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +  A  +   M    + P+   Y  LI+  C+   + +A +L + M  K 
Sbjct: 453 LIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKN 512

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    Y ++I+G  K G    A  + ++M++MG+  D   Y +L+    +   + +A 
Sbjct: 513 MIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQAR 572

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           +   EM  +G+ PD    + L+      G +D A+    E+   GL+  N
Sbjct: 573 KFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHGN 622


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 151/463 (32%), Positives = 262/463 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV P+  TYN++++ YC  G  +EA   +  M   G
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYNSL++ LCK GRC  A+++ D M + GL P+  TY TLL     K  + E  
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 359

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ P+   FS LI  +++ G++D+A++ F +M+  GL PD V Y  +I   
Sbjct: 360 GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A++  ++M+++      + YN++++ LC      +A +L  EML+RG+  D 
Sbjct: 420 CKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDT 479

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I  HCK+G + ++  LFD+M +  +KPDI+TY+TLIDG+C  G+M++A KL A 
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 539

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++Y  LINGYC +  + +A  L+ EM   G+ P +++ N I++G  ++  
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    +   G   +  +YN +++G  +    D+A  +   +    L  +  T+N+
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           ++    + GR  +++ +   +   GL PD  TY+ +    + Q
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702



 Score =  297 bits (760), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 163/509 (32%), Positives = 268/509 (52%), Gaps = 38/509 (7%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC D +  D+  + L  M Q G  P+  +YN L+   C E   +EA +L+  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 60  G--LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V +Y ++ING  K+G  D+A     EML  G+ P+  TY++++   C+ + M 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A E+   M + GV P+  ++++++  +  +GQ   A+ + ++M S G+ PD V Y  ++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  C+NG   EA KM D M ++G   ++ TY T+L G      L E   L + M+  G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+ Y F+ LI  + K G +++A+ +F  M Q+ + PD VTY T+I   CK G +E A + 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 298 WADMISRKISPNYISY--------------------------GI---------LINGYCS 322
           +  MI  ++SP  I Y                          GI         +I+ +C 
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V E+ +L+  MV  G+KP +++ +T+I GYC +G   +A + L+ MVS G+ PD ++
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNTLING+ +   M+ A  L  +ME+ G+ PD+ITYN+IL G  +  R   ++ +   + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           E G   + STY  +++G    N   EA R
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALR 640



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/462 (32%), Positives = 246/462 (53%), Gaps = 3/462 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P+  TY  LI + C  G L+  F  + ++  KG +     +  L+ GLC   R   A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG--VAPDIVSFSTLI 142
           + VL  M Q+G  P+  +YN LL   C +    EA E+   M   G    PD+VS++T+I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F + G LD+A   + EM   G++P+ V Y+ II   C+   + +A+++   M++ G +
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            +  TYN+I++G C +    EA     +M   GV PD  T+ +L+   CK+G   +A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           FD MT++ +KP+I TY TL+ G+   G + + + L   M+   I PN+  + ILI  Y  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V +A  ++ +M  +G+ P  V+  T+I   C+SG    A  +  +M+ E + P +I 
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN+LI+     +  DKA  L+ +M ++G+  D I +N I+   C++GR+ +SE +   M+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             G+ PD  TY+TLI+G+     + EA +    M+  G  PD
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 242/504 (48%), Gaps = 70/504 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C   +   A  FL +M   GV PD VTYN+L++  C+ G   EA ++ +SM+ +G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 61  LKPGVFTYNSLING--------------------------------LC---KKGRCDRAK 85
           LKP + TY +L+ G                                +C   K+G+ D+A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            V  +M Q GL+PDT TY T                                   +IGI 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGT-----------------------------------VIGIL 419

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            ++G+++ A+ YF +M    L P N++Y  +I+  C      +A ++  EML++G  +D 
Sbjct: 420 CKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDT 479

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           + +N+I++  C+   + E++ LF+ M+  GV PD  T++TLI G+C  G M++A  L   
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 539

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    +KPD VTYNTLI+G+CK+  ME A  L+ +M S  +SP+ I+Y I++ G      
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              A  L+  +   G +  L + N I+ G C++    +A      +    +  ++ ++N 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I   ++    D+A  L + +   GLVPDV TY+++      QG + + + +   M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 446 LNPDRSTYTTLINGHVSQNNLKEA 469
              +     +++   + + ++  A
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRA 743



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 200/368 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K  K+D A +   +M Q+G+ PDTVTY T+I   C+ G +E+A +    M  + 
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG   YNSLI+ LC   + D+AKE++ EML  G+  DT  +N+++   C++  + E+E
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV PDI+++STLI  +   G++D A      M S G+ PD V Y  +INGY
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM   G   D++TYN IL GL + +    A +L+  + E G   + 
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   ++AL +F  +    ++ +  T+N +I    KVG  ++A  L+A 
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +  + P+  +Y ++       G + E   L+  M   G        N+I++   + GD
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 361 ASKADEFL 368
            ++A  +L
Sbjct: 740 ITRAGTYL 747



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 38/218 (17%)

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK---------------------- 342
           +++PN  +YGILI   C  G +   F     ++ KG +                      
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 343 --------------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSISYNTL 386
                         P + S N ++KG C    + +A E L  M  +G D  PD +SY T+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           INGF +E ++DKA+    +M ++G++P+V+TY+ I+   C+   M  +  +L  M++ G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+  TY ++++G+ S    KEA  F  +M   G  PD
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 154/484 (31%), Positives = 273/484 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K+  A   + ++ + G  P+T+T++TLIN  C EG + EA +L++ M   G
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + T N+L+NGLC  G+   A  ++D+M++ G  P+  TY  +L   C+    + A 
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M  R +  D V +S +I    ++G LD A   F EM+  G+  + + Y I+I G+
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +  K+  +M+++    +VVT++ +++   +   L EA++L  EM+ RG+ PD 
Sbjct: 407 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 466

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI G CK+ +++KA  + D+M  K   P+I T+N LI+G+CK   ++   +L+  
Sbjct: 467 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 526

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  + ++Y  LI G+C +G +  A  L+ EMV + + P +V+   ++ G C +G+
Sbjct: 527 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 586

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + KA E   K+    ++ D   YN +I+G      +D A+ L   +  +G+ P V TYN+
Sbjct: 587 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 646

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G + ++EL+  +M E G  PD  TY  LI  H+   +  ++ +  +E+ + G
Sbjct: 647 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 706

Query: 481 FVPD 484
           F  D
Sbjct: 707 FSVD 710



 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 258/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + +A+ K  + D       +ME KG+  +  T + +IN +CR   L  AF  M  +   G
Sbjct: 192 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 251

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+++LINGLC +GR   A E++D M++MG  PD  T NTL+   C     +EA 
Sbjct: 252 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 311

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G  P+ V++  ++ +  ++GQ   A+   R+M+   +  D V Y+III+G 
Sbjct: 312 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 371

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  A  + +EM  KG   +++TYN ++ G C A    +   L  +M++R + P+ 
Sbjct: 372 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 431

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ LI    K+G + +A  L   M  + I PD +TY +LIDGFCK   ++KAN++   
Sbjct: 432 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 491

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+   PN  ++ ILINGYC    + +   L+ +M  +G+    V+ NT+I+G+C  G 
Sbjct: 492 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 551

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E   +MVS  V P+ ++Y  L++G       +KA  +  K+E   +  D+  YN+
Sbjct: 552 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 611

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+ G C   ++ D+  +   +  KG+ P   TY  +I G   +  L EA     +M + G
Sbjct: 612 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 671

Query: 481 FVPD 484
             PD
Sbjct: 672 HAPD 675



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 138/422 (32%), Positives = 232/422 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LC   K   A + + +M + G  P+ VTY  ++N  C+ G    A +L+  M  + 
Sbjct: 297 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 356

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y+ +I+GLCK G  D A  + +EM   G++ +  TYN L+   C      +  
Sbjct: 357 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 416

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M +R + P++V+FS LI  F + G+L  A    +EM   G+ PD + YT +I+G+
Sbjct: 417 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A +M D M+ KGC  ++ T+N ++NG C+A  + +  +LF +M  RGV  D 
Sbjct: 477 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 536

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G C+ G +N A  LF  M  + + P+IVTY  L+DG C  GE EKA +++  
Sbjct: 537 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 596

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+  +   Y I+I+G C+   V +A+ L+  +  KG+KP + + N +I G C+ G 
Sbjct: 597 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 656

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A+    KM  +G  PD  +YN LI   + + +  K+  L+ +++  G   D  T  +
Sbjct: 657 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 716

Query: 421 IL 422
           ++
Sbjct: 717 VI 718



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 229/430 (53%)

Query: 47  EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL 106
           ++A  L   M      P V  ++ L + + K  + D    +  +M   G++ +  T + +
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
           +   CR   +  A     ++ + G  P+ ++FSTLI      G++  AL     M   G 
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            PD +    ++NG C +G   EA+ + D+M+E GC  + VTY  +LN +C++     A +
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L  +M ER +  D   ++ +I G CK G+++ A NLF+ M  K I  +I+TYN LI GFC
Sbjct: 348 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 407

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
             G  +   KL  DMI RKI+PN +++ +LI+ +   G + EA  L  EM+ +GI P  +
Sbjct: 408 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 467

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           +  ++I G+C+     KA++ +  MVS+G DP+  ++N LING+ +   +D    L  KM
Sbjct: 468 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 527

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
             +G+V D +TYN ++ GFC  G+++ ++ +   M+ + + P+  TY  L++G       
Sbjct: 528 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 587

Query: 467 KEAFRFHDEM 476
           ++A    +++
Sbjct: 588 EKALEIFEKI 597



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 247/476 (51%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D K D A     +M      P  + ++ L +A  +    +    L   M  KG+   ++T
Sbjct: 164 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 223

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            + +IN  C+  +   A   + +++++G  P+T T++TL+   C +  +SEA E+   M 
Sbjct: 224 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 283

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G  PD+++ +TL+     +G+   A++   +M   G  P+ V Y  ++N  C++G   
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A+++  +M E+   +D V Y+ I++GLC+   L  A +LFNEM  +G+  +  T+  LI
Sbjct: 344 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 403

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G C  G  +    L   M ++ I P++VT++ LID F K G++ +A +L  +MI R I+
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ I+Y  LI+G+C   H+ +A ++   MV KG  P + + N +I GYC++       E 
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             KM   GV  D+++YNTLI GF     ++ A  L  +M ++ + P+++TY ++L G C 
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 583

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            G    +  I  ++ +  +  D   Y  +I+G  + + + +A+     +  +G  P
Sbjct: 584 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 639



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 220/405 (54%)

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + D A ++  +M+     P    ++ L     + +       +  +M  +G+A ++ + S
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            +I  F R  +L  A     ++   G  P+ + ++ +ING C  G V EAL++ D M+E 
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   D++T NT++NGLC +    EA  L ++M+E G  P+  T+  +++  CK G    A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + L   M +++IK D V Y+ +IDG CK G ++ A  L+ +M  + I+ N I+Y ILI G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C+ G   +  +L  +M+ + I P +V+ + +I  + + G   +A+E   +M+  G+ PD
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +I+Y +LI+GF +E ++DKA  +V  M ++G  P++ T+N+++ G+C+  R+ D   +  
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +M  +G+  D  TY TLI G      L  A     EM+ R   P+
Sbjct: 526 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 570



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 116/219 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK ++ID       +M  +GV  DTVTYNTLI  +C  G L  A +L   M  + 
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY  L++GLC  G  ++A E+ +++ +  +  D   YN ++   C    + +A 
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 626

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++FC +  +GV P + +++ +IG   + G L  A + FR+M+  G  PD   Y I+I  +
Sbjct: 627 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 686

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
             +G   +++K+ +E+   G  +D  T   +++ L   K
Sbjct: 687 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDK 725


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 151/463 (32%), Positives = 262/463 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV P+  TYN++++ YC  G  +EA   +  M   G
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYNSL++ LCK GRC  A+++ D M + GL P+  TY TLL     K  + E  
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 359

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ P+   FS LI  +++ G++D+A++ F +M+  GL PD V Y  +I   
Sbjct: 360 GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A++  ++M+++      + YN++++ LC      +A +L  EML+RG+  D 
Sbjct: 420 CKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDT 479

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I  HCK+G + ++  LFD+M +  +KPDI+TY+TLIDG+C  G+M++A KL A 
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 539

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++Y  LINGYC +  + +A  L+ EM   G+ P +++ N I++G  ++  
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    +   G   +  +YN +++G  +    D+A  +   +    L  +  T+N+
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           ++    + GR  +++ +   +   GL PD  TY+ +    + Q
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702



 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 163/510 (31%), Positives = 268/510 (52%), Gaps = 38/510 (7%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           M+  LC D +  D+  + L  M Q G  P+  +YN L+   C +   +EA +L+  M   
Sbjct: 132 MLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDD 191

Query: 60  G--LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V +Y ++ING  K+G  D+A     EML  G+ P+  TY++++   C+ + M 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A E+   M + GV P+  ++++++  +  +GQ   A+ + ++M S G+ PD V Y  ++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  C+NG   EA KM D M ++G   ++ TY T+L G      L E   L + M+  G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+ Y F+ LI  + K G +++A+ +F  M Q+ + PD VTY T+I   CK G +E A + 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 298 WADMISRKISPNYISY--------------------------GI---------LINGYCS 322
           +  MI  ++SP  I Y                          GI         +I+ +C 
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V E+ +L+  MV  G+KP +++ +T+I GYC +G   +A + L+ MVS G+ PD ++
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNTLING+ +   M+ A  L  +ME+ G+ PD+ITYN+IL G  +  R   ++ +   + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           E G   + STY  +++G    N   EA R 
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRM 641



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 148/462 (32%), Positives = 244/462 (52%), Gaps = 3/462 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P+  TY  L+ + C  G L+  F  + ++  KG       +  ++ GLC   R   A 
Sbjct: 87  VTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAM 146

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG--VAPDIVSFSTLI 142
           + VL  M Q+G  P+  +YN LL   C      EA E+   M   G    PD+VS++T+I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F + G LD+A   + EM   G++P+ V Y+ II   C+   + +A+++   M++ G +
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            +  TYN+I++G C +    EA     +M   GV PD  T+ +L+   CK+G   +A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           FD MT++ +KP+I TY TL+ G+   G + + + L   M+   I PN+  + ILI  Y  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V +A  ++ +M  +G+ P  V+  T+I   C+SG    A  +  +M+ E + P +I 
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN+LI+     +  DKA  L+ +M ++G+  D I +N I+   C++GR+ +SE +   M+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             G+ PD  TY+TLI+G+     + EA +    M+  G  PD
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 260/487 (53%), Gaps = 3/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++ + C   ++D     L  + +KG   D + +  ++   C +    +A  + +  M+  
Sbjct: 97  LMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG--LSPDTATYNTLLVESCRKENMS 117
           G  P VF+YN L+ GLC   R   A E+L  M   G    PD  +Y T++    ++ ++ 
Sbjct: 157 GCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A   + EM  RG+ P++V++S++I    +   +D+A+     M   G++P+   Y  I+
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +GYC +G   EA+    +M   G   DVVTYN++++ LC+    TEA  +F+ M +RG+ 
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+ TL+ G+   G + +   L D+M +  I P+   ++ LI  + K G++++A  +
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           ++ M  + ++P+ ++YG +I   C  G V +A R + +M+ + + P  +  N++I   C 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
                KA E + +M+  G+  D+I +N++I+   +E  + ++  L   M   G+ PD+IT
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y+ ++ G+C  G+M ++  +L  M+  G+ PD  TY TLING+   + +++A     EM 
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576

Query: 478 QRGFVPD 484
             G  PD
Sbjct: 577 SSGVSPD 583



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 234/469 (49%), Gaps = 35/469 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ +   A+     M ++G+ P+  TY TL+  Y  +G L E   L++ M   G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  + ++ LI    K+G+ D+A  V  +M Q GL+PDT TY T               
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT--------------- 414

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                               +IGI  ++G+++ A+ YF +M    L P N++Y  +I+  
Sbjct: 415 --------------------VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +A ++  EML++G  +D + +N+I++  C+   + E++ LF+ M+  GV PD 
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI G+C  G M++A  L   M    +KPD VTYNTLI+G+CK+  ME A  L+ +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  +SP+ I+Y I++ G         A  L+  +   G +  L + N I+ G C++  
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A      +    +  ++ ++N +I   ++    D+A  L + +   GLVPDV TY++
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           +      QG + + + +   M E G   +     +++   + + ++  A
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 200/368 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K  K+D A +   +M Q+G+ PDTVTY T+I   C+ G +E+A +    M  + 
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG   YNSLI+ LC   + D+AKE++ EML  G+  DT  +N+++   C++  + E+E
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV PDI+++STLI  +   G++D A      M S G+ PD V Y  +INGY
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM   G   D++TYN IL GL + +    A +L+  + E G   + 
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   ++AL +F  +    ++ +  T+N +I    KVG  ++A  L+A 
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +  + P+  +Y ++       G + E   L+  M   G        N+I++   + GD
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 361 ASKADEFL 368
            ++A  +L
Sbjct: 740 ITRAGTYL 747



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI----------------------- 341
           +++PN  +YGIL+   C  G +   F     ++ KG                        
Sbjct: 86  EVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDA 145

Query: 342 -------------KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSISYNTL 386
                         P + S N ++KG C    + +A E L  M  +G D  PD +SY T+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           INGF +E ++DKA+    +M ++G++P+V+TY+ I+   C+   M  +  +L  M++ G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+  TY ++++G+ S    KEA  F  +M   G  PD
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 158/496 (31%), Positives = 270/496 (54%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G++PD VT+NTL++  C E  + EA  L + M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T+ +L+NGLC++GR   A  +LD M++ GL P   TY T++   C+K +   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 121 EIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M     + P++V +S +I    ++G+   A   F EM+  G+ PD   Y  +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   +A ++  EMLE+    DVVTYN ++N   +     EA++L++EML RG+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++++I G CK   ++ A ++F +M  K   P+++T+NTLIDG+C    ++   +L  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    +  +  +Y  LI+G+  +G +  A  L  EM+  G+ P +V+C+T++ G C +G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 360 DASKADEFLSKMVSE-----------GVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
               A E    M              GV+PD  +YN LI+G + E    +A  L  +M +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+VPD ITY+ ++ G C+Q R+ ++  +   M  K  +P+  T+TTLING+     + +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 469 AFRFHDEMLQRGFVPD 484
                 EM +RG V +
Sbjct: 600 GLELFCEMGRRGIVAN 615



 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 152/470 (32%), Positives = 256/470 (54%), Gaps = 14/470 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  L+    R    +    L   M  K ++  ++++  LI   C   +   A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++ ++GL PD  T+NTLL   C ++ +SEA  +F +M      P++V+F+TL+    R
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVV 206
            G++  A+     M   GL P  + Y  I++G C+ G  + AL +  +M E   ++ +VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            Y+ I++ LC+    ++A +LF EM E+G+FPD +T+ ++I G C  G  + A  L   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ I PD+VTYN LI+ F K G+  +A +L+ +M+ R I PN I+Y  +I+G+C    +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  ++Y M  KG  P L++ NT+I GYC +       E L +M   G+  D+ +YNTL
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-- 444
           I+GF    +++ A  L+ +M + GL PD++T + +L G C  G++ D+ L ++++++K  
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA-LEMFKVMQKSK 495

Query: 445 ----------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                     G+ PD  TY  LI+G +++    EA   ++EM  RG VPD
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 264/481 (54%), Gaps = 12/481 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++N LC++ +I  A   L  M + G+ P  +TY T+++  C++G    A  L+  M    
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P V  Y+++I+ LCK GR   A+ +  EM + G+ PD  TYN+++V  C     S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E++  EM  R ++PD+V+++ LI  F + G+   A   + EM   G++P+ + Y+ +I+G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +  A  M   M  KGC  +++T+NT+++G C AK + +  +L +EM E G+  D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIHG    G++N AL+L   M    + PDIVT +TL+DG C  G+++ A +++ 
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+  +Y ILI+G  + G   EA  L+ EM  +GI P  ++ 
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G C+     +A +    M S+   P+ +++ TLING+ +   +D    L  +M  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V + ITY  ++ GF + G ++ +  I   MI  G+ PD  T   ++ G  S+  LK 
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 469 A 469
           A
Sbjct: 670 A 670



 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 139/418 (33%), Positives = 241/418 (57%), Gaps = 11/418 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCKD +   A+    EM++KG++PD  TYN++I  +C  G   +A QL+  M  + 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LIN   K+G+   A+E+ DEML  G+ P+T TY++++   C++  +  AE
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+ +G +P++++F+TLI  +    ++D  +    EM   GLV D   Y  +I+G+
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
              G +  AL +  EM+  G   D+VT +T+L+GLC    L +A ++F  M +       
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 235 -----GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                GV PD  T+  LI G   +G   +A  L++ M  + I PD +TY+++IDG CK  
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A +++  M S+  SPN +++  LINGYC  G V +   L+ EM  +GI    ++  
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           T+I G+ + G+ + A +   +M+S GV PD+I+   ++ G   +E + +A A++ K++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 211/372 (56%), Gaps = 1/372 (0%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +A ++F +M R    P +V F  L+G+  R  + D  +  +++M+   +  D   +
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           TI+I  +C    +  AL    ++ + G   DVVT+NT+L+GLC    ++EA +LF++M E
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
               P+  TFTTL++G C++G + +A+ L D M +  ++P  +TY T++DG CK G+   
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 294 ANKLWADMIS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           A  L   M     I PN + Y  +I+  C  G  ++A  L+ EM  KGI P L + N++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G+C SG  S A++ L +M+   + PD ++YN LIN FV+E    +A  L  +M  +G++
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+ ITY+ ++ GFC+Q R+  +E + + M  KG +P+  T+ TLI+G+     + +    
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 473 HDEMLQRGFVPD 484
             EM + G V D
Sbjct: 418 LHEMTETGLVAD 429



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 55/340 (16%)

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  GF  E+LK++                   +G    K L +A DLF++ML     P  
Sbjct: 39  CEAGFGGESLKLQ-------------------SGFHEIKGLEDAIDLFSDMLRSRPLPSV 79

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  L+    +    +  ++L+  M +K I+ DI ++  LI  FC   ++  A   +  
Sbjct: 80  VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGK 139

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+ +++  L++G C    V+EA  L+++M     +P +V+  T++ G CR G 
Sbjct: 140 ITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME------------- 407
             +A   L +M+ +G+ P  I+Y T+++G  ++ +   A  L+ KME             
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 408 -----------------------NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
                                   +G+ PD+ TYN ++ GFC  GR  D+E +L  M+E+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++PD  TY  LIN  V +    EA   +DEML RG +P+
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 151/464 (32%), Positives = 270/464 (58%), Gaps = 5/464 (1%)

Query: 27  YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC----- 81
           +  +  ++ ++ +  R GF+ +A  L++  +  G  P V +YN++++ L ++        
Sbjct: 129 FSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDY 188

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D A+ V  +M++ G+SP+  TYN ++     + ++ +      +M + G++P++V+++TL
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I    +  ++  A+   R M   G+  + + Y  +ING C  G + E  ++ +EM  KG 
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           V D VTYNT++NG C+   L +   L +EM+ +G+ P+  T+TTLI+  CK GN+++A+ 
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +FD M  + ++P+  TY TLIDGFC+ G M +A K+ ++MI    SP+ ++Y  L++GYC
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
            +G V EA  +   MV +G+ P +VS +T+I G+CR  +  KA +   +MV +GV PD++
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y++LI G   ++ + +AF L  +M  +GL PD +TY  ++  +C  G +  +  +   M
Sbjct: 489 TYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEM 548

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +++G  PD  TY+ LING   +   K A R   ++     VPDD
Sbjct: 549 VQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDD 592



 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 158/508 (31%), Positives = 276/508 (54%), Gaps = 22/508 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGF-----LEEAFQLMNS 55
           +V +L +   +  A   L    + G  P  ++YN +++A  R         ++A ++   
Sbjct: 138 VVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRD 197

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M   G+ P V+TYN +I G+  +G  ++    + +M + G+SP+  TYNTL+  SC+K+ 
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + EA  +   M+  GVA +++S++++I      G++        EM+  GLVPD V Y  
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           ++NG+C+ G + + L +  EM+ KG   +VVTY T++N +C+A  L+ A ++F++M  RG
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P+  T+TTLI G C+ G MN+A  +   M      P +VTYN L+ G+C +G +++A 
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAV 437

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            +   M+ R + P+ +SY  +I G+C    + +AF++  EMV KG+ P  V+ +++I+G 
Sbjct: 438 GILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGL 497

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C      +A +   +M+  G+ PD ++Y +LIN +  +  + KA  L  +M  +G +PD 
Sbjct: 498 CLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDN 557

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK-------- 467
           +TY+V++ G  ++ R   ++ +L ++  +   PD  TY TLI  + S N  K        
Sbjct: 558 VTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE-NCSNNEFKSVEGLVKG 616

Query: 468 --------EAFRFHDEMLQRGFVPDDAF 487
                   EA R    MLQR   P+ A 
Sbjct: 617 FCMKGLMNEADRVFKTMLQRNHKPNAAI 644



 Score =  287 bits (735), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 160/499 (32%), Positives = 261/499 (52%), Gaps = 15/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A CK  K+  A   L  M   GV  + ++YN++IN  C +G + E  +L+  M GKG
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TYN+L+NG CK+G   +   +L EM+  GLSP+  TY TL+   C+  N+S A 
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF +M  RG+ P+  +++TLI  F + G ++ A     EM  +G  P  V Y  +++GY
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V EA+ +   M+E+G   DVV+Y+T++ G CR + L +A  +  EM+E+GV PD 
Sbjct: 428 CFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LI G C    + +A +LF  M ++ + PD VTY +LI+ +C  GE+ KA +L  +
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDE 547

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII-------- 352
           M+ R   P+ ++Y +LING         A RL  ++  +   P  V+ NT+I        
Sbjct: 548 MVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEF 607

Query: 353 -------KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
                  KG+C  G  ++AD     M+     P++  YN +I+G  R  N+ KA+ L  +
Sbjct: 608 KSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYME 667

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +E+       +    ++    R+G   +   +L  ++      D      L+  +  + N
Sbjct: 668 LEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGN 727

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +        EM + G +PD
Sbjct: 728 MDAVLNVLTEMAKDGLLPD 746



 Score =  287 bits (735), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 159/470 (33%), Positives = 252/470 (53%), Gaps = 15/470 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC   ++      + EM  KG+ PD VTYNTL+N +C+EG L +   L++ M GKG
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG 342

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY +LIN +CK G   RA E+ D+M   GL P+  TY TL+   C+K  M+EA 
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAY 402

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G +P +V+++ L+  +   G++  A+   R M   GL PD V Y+ +I G+
Sbjct: 403 KVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGF 462

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   + +A +M++EM+EKG + D VTY++++ GLC  + L EA DLF EM+ RG+ PD 
Sbjct: 463 CRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDE 522

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI+ +C DG ++KAL L D M Q+   PD VTY+ LI+G  K    + A +L   
Sbjct: 523 VTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLK 582

Query: 301 MISRKISPNYISYGILI---------------NGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           +   +  P+ ++Y  LI                G+C  G + EA R++  M+ +  KP  
Sbjct: 583 LFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNA 642

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
              N +I G+ R G+  KA     ++        +++   L+    RE   D+   L+  
Sbjct: 643 AIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQN 702

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +     + D     V++    ++G M     +L  M + GL PD   +++
Sbjct: 703 ILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHSS 752


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 151/463 (32%), Positives = 262/463 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV P+  TYN++++ YC  G  +EA   +  M   G
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYNSL++ LCK GRC  A+++ D M + GL P+  TY TLL     K  + E  
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 359

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ P+   FS LI  +++ G++D+A++ F +M+  GL PD V Y  +I   
Sbjct: 360 GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A++  ++M+++      + YN++++ LC      +A +L  EML+RG+  D 
Sbjct: 420 CKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDT 479

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I  HCK+G + ++  LFD+M +  +KPDI+TY+TLIDG+C  G+M++A KL A 
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 539

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++Y  LINGYC +  + +A  L+ EM   G+ P +++ N I++G  ++  
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    +   G   +  +YN +++G  +    D+A  +   +    L  +  T+N+
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           ++    + GR  +++ +   +   GL PD  TY+ +    + Q
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702



 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 163/510 (31%), Positives = 268/510 (52%), Gaps = 38/510 (7%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC D +  D+  + L  M Q G  P+  +YN L+   C E   +EA +L+  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 60  G--LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V +Y ++ING  K+G  D+A     EML  G+ P+  TY++++   C+ + M 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A E+   M + GV P+  ++++++  +  +GQ   A+ + ++M S G+ PD V Y  ++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  C+NG   EA KM D M ++G   ++ TY T+L G      L E   L + M+  G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+ Y F+ LI  + K G +++A+ +F  M Q+ + PD VTY T+I   CK G +E A + 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 298 WADMISRKISPNYISY--------------------------GI---------LINGYCS 322
           +  MI  ++SP  I Y                          GI         +I+ +C 
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V E+ +L+  MV  G+KP +++ +T+I GYC +G   +A + L+ MVS G+ PD ++
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNTLING+ +   M+ A  L  +ME+ G+ PD+ITYN+IL G  +  R   ++ +   + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           E G   + STY  +++G    N   EA R 
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRM 641



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/462 (32%), Positives = 246/462 (53%), Gaps = 3/462 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P+  TY  LI + C  G L+  F  + ++  KG +     +  L+ GLC   R   A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG--VAPDIVSFSTLI 142
           + VL  M Q+G  P+  +YN LL   C +    EA E+   M   G    PD+VS++T+I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F + G LD+A   + EM   G++P+ V Y+ II   C+   + +A+++   M++ G +
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            +  TYN+I++G C +    EA     +M   GV PD  T+ +L+   CK+G   +A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           FD MT++ +KP+I TY TL+ G+   G + + + L   M+   I PN+  + ILI  Y  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V +A  ++ +M  +G+ P  V+  T+I   C+SG    A  +  +M+ E + P +I 
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN+LI+     +  DKA  L+ +M ++G+  D I +N I+   C++GR+ +SE +   M+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             G+ PD  TY+TLI+G+     + EA +    M+  G  PD
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 242/504 (48%), Gaps = 70/504 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C   +   A  FL +M   GV PD VTYN+L++  C+ G   EA ++ +SM+ +G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 61  LKPGVFTYNSLING--------------------------------LC---KKGRCDRAK 85
           LKP + TY +L+ G                                +C   K+G+ D+A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            V  +M Q GL+PDT TY T                                   +IGI 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGT-----------------------------------VIGIL 419

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            ++G+++ A+ YF +M    L P N++Y  +I+  C      +A ++  EML++G  +D 
Sbjct: 420 CKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDT 479

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           + +N+I++  C+   + E++ LF+ M+  GV PD  T++TLI G+C  G M++A  L   
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 539

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    +KPD VTYNTLI+G+CK+  ME A  L+ +M S  +SP+ I+Y I++ G      
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              A  L+  +   G +  L + N I+ G C++    +A      +    +  ++ ++N 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I   ++    D+A  L + +   GLVPDV TY+++      QG + + + +   M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 446 LNPDRSTYTTLINGHVSQNNLKEA 469
              +     +++   + + ++  A
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRA 743



 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 200/368 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K  K+D A +   +M Q+G+ PDTVTY T+I   C+ G +E+A +    M  + 
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG   YNSLI+ LC   + D+AKE++ EML  G+  DT  +N+++   C++  + E+E
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV PDI+++STLI  +   G++D A      M S G+ PD V Y  +INGY
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM   G   D++TYN IL GL + +    A +L+  + E G   + 
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   ++AL +F  +    ++ +  T+N +I    KVG  ++A  L+A 
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +  + P+  +Y ++       G + E   L+  M   G        N+I++   + GD
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 361 ASKADEFL 368
            ++A  +L
Sbjct: 740 ITRAGTYL 747



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 38/218 (17%)

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK---------------------- 342
           +++PN  +YGILI   C  G +   F     ++ KG +                      
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 343 --------------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSISYNTL 386
                         P + S N ++KG C    + +A E L  M  +G D  PD +SY T+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           INGF +E ++DKA+    +M ++G++P+V+TY+ I+   C+   M  +  +L  M++ G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+  TY ++++G+ S    KEA  F  +M   G  PD
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 165/489 (33%), Positives = 270/489 (55%), Gaps = 13/489 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  + D+      +M  +G  P+ VTY TLI+  CR+G   +AF+L + M  K 
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V  Y  LI GLC + R   A+ +   M   G+ P+  TYNT++   C+  ++ +A 
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++ EM   G+ P++V+F  LI    +  ++  A  +  +M S G+VP+  +Y  +I+GY
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EAL +  E+ +   + DV TY+ ++ GLC    + EAD L  EM ++G  P+ 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G+CK+GNM KA+ +   MT+K I+P+I+T++TLIDG+CK G+ME A  L+ +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+ ++Y  LI+G+   G+  EAFRL  EM   G+ P + + + +I G C+ G 
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523

Query: 361 ASKADE-FLSKMVSEGV------------DPDSISYNTLINGFVREENMDKAFALVSKME 407
            S A + FL+K  ++               P+ + Y  LI G   +  + KA    S M 
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMR 583

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             GL PDV T  VI+ G  R   + D  ++   +++ G+ P+ S Y  L  G+     LK
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLK 643

Query: 468 EAFRFHDEM 476
            A R  +++
Sbjct: 644 SALRCSEDL 652



 Score =  280 bits (717), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 153/480 (31%), Positives = 265/480 (55%), Gaps = 18/480 (3%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           L  +E     P+   +  LI A+   G +EEA  +   M    + P +   N +++GL K
Sbjct: 116 LSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVK 170

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           KGR D   +V  +M+  G SP+  TY TL+   CR+ +  +A  +F EM  + + P +V 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ LI       ++  A   FR M+++G++P+   Y  +++GYC+   V +AL++  EML
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G + +VVT+  +++GLC+   +  A     +M   GV P+ + +  LI G+CK GN++
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +AL+L   + +  I PD+ TY+ LI G C V  ME+A+ L  +M  +   PN ++Y  LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +GYC  G++ +A  +  +M  KGI+P +++ +T+I GYC++G    A    ++MV +G+ 
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS-EL 436
           PD ++Y  LI+G  ++ N  +AF L  +M+  GL P+V T + ++ G C+ GR+ D+ +L
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 437 ILWRM-----------IEKGL-NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            L +            +++ L +P+   YT LI G  +   + +A +F  +M   G  PD
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590



 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 249/474 (52%), Gaps = 13/474 (2%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P     N +++   ++G  +  +++   M  +G  P V TY +LI+G C++G   +A 
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            + DEM++  + P    Y  L+   C +  +SEAE +F  M   G+ P++ +++T++  +
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +   + +AL  ++EM   GL+P+ V + I+I+G C+   ++ A K   +M   G V ++
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN +++G C+A  L+EA  L +E+ +  + PD +T++ LI G C    M +A  L   
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +K   P+ VTYNTLIDG+CK G MEKA ++ + M  + I PN I++  LI+GYC  G 
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  L+ EMV KG+ P +V+   +I G+ + G+  +A     +M   G+ P+  + + 
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513

Query: 386 LINGFVREENMDKAFAL-------------VSKMENQGLVPDVITYNVILTGFCRQGRMH 432
           LI+G  ++  +  A  L              ++++     P+ + Y  ++ G C  GR+ 
Sbjct: 514 LIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIF 573

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            +      M   GL PD  T   +I GH    +L++      ++L+ G +P+ +
Sbjct: 574 KASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSS 627



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/354 (34%), Positives = 192/354 (54%), Gaps = 13/354 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++ SA+ FL +M   GV P+   YN LI+ YC+ G L EA  L + +    
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY+ LI GLC   R + A  +L EM + G  P+  TYNTL+   C++ NM +A 
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M+ +G+ P+I++FSTLI  + + G+++ A+  + EM   GL+PD V YT +I+G+
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF------------ 228
            ++G   EA ++  EM E G   +V T + +++GLC+   +++A  LF            
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSK 543

Query: 229 -NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
            NE+      P+   +T LI G C DG + KA   F  M    ++PD+ T   +I G  +
Sbjct: 544 TNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR 603

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
              +     L AD++   I PN   Y +L  GY   G++  A R   ++ G GI
Sbjct: 604 AMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 48/219 (21%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  K+++A     EM  KG+ PD V Y  LI+ + ++G  +EAF+L   M   G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 61  LKPGVFT------------------------------------------------YNSLI 72
           L P VFT                                                Y +LI
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563

Query: 73  NGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA 132
            GLC  GR  +A +   +M   GL PD  T   ++    R  ++ +   +  ++ + G+ 
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGII 623

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           P+   +  L   +  +G L  AL    ++   G+   N+
Sbjct: 624 PNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGCSNL 662


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 165/503 (32%), Positives = 282/503 (56%), Gaps = 19/503 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ K+  A   L  M Q+G   D VTY+TLI   C E  + EA  L  SM   G
Sbjct: 60  LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLG 119

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ------MGLSPDTATYNTLLVESCRKE 114
            +P   TY +L+ GLC+ G  + A ++  EML       +   P   +Y+ ++   C+  
Sbjct: 120 CRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 179

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              EA E+F EM  +G+ PD++S+++LI  F  +G+ ++A   F EM   G+ PD     
Sbjct: 180 REDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSG 239

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+ +C+ G V+EA ++ + M+ +GC++D+VTY+T++ GLC    ++EA  LF  M + 
Sbjct: 240 VLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 299

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ-------KSIKPDIVTYNTLIDGFCK 287
           G  PD   + TL+ G C+ G +N AL+L   M         K I+PD+ T + LID  CK
Sbjct: 300 GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCK 359

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G++ +AN+L   MI R    + ++Y  LI G C    ++EA  L+  M   G +P  ++
Sbjct: 360 EGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAIT 419

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSE----GV--DPDSISYNTLINGFVREENMDKAFA 401
             T++KG C++G+ + A +   +M+++    G+   P  ISY+ +I+G  ++   D+A  
Sbjct: 420 YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 479

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           L  +M+ QG++PDVI+Y  ++ GFC  G+   ++ +   M++ G+ PD +T + LI+   
Sbjct: 480 LFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLC 539

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
            +  + EA +  + ++QRG + D
Sbjct: 540 KKGKVIEANKLLEVVIQRGCILD 562



 Score =  301 bits (770), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 163/502 (32%), Positives = 275/502 (54%), Gaps = 18/502 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ K+  A   L  M Q+G   D VTY+TLI   C E  + EA  L  SM   G
Sbjct: 353 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLG 412

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ------MGLSPDTATYNTLLVESCRKE 114
            +P   TY +L+ GLC+ G  + A ++  EML       +   P   +Y+ ++   C+  
Sbjct: 413 CRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 472

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              EA E+F EM  +G+ PD++S++TLI  F  +G+ ++A   F EM   G+ PD    +
Sbjct: 473 REDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 532

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+  C+ G V+EA K+ + ++++GC++DVVT  T++ GLC    +++A  LF +M + 
Sbjct: 533 VLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 592

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS------IKPDIVTYNTLIDGFCKV 288
           G  P+  T  TL+ G C+ GN+  AL L   M   +       KP+ ++Y+ +IDG CK 
Sbjct: 593 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 652

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G  ++A +L+ +M +  + P+ ISY  LI+G+C  G   +A  L+ EMV  G++P + + 
Sbjct: 653 GREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTF 712

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           + +I   C+ G   +A+E L  M+  G  P++++Y TL+ G    + + +A  L  KM+ 
Sbjct: 713 SVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 772

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMI----EKGLN--PDRSTYTTLINGHVS 462
            G +PDV+TY  ++ G C+ G +  +  +  +M+    + G N  PD  +Y+ +I+G   
Sbjct: 773 LGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCK 832

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
                EA     EM   G +P+
Sbjct: 833 HGREDEARELFKEMKALGVIPN 854



 Score =  291 bits (744), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 159/523 (30%), Positives = 270/523 (51%), Gaps = 53/523 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM---- 56
           ++  LC +H+I  A      M++ G  PD +TY TL+   C+ G +  A QL   M    
Sbjct: 388 LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 447

Query: 57  --SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
              G   KP + +Y+ +I+GLCK  R D A+E+ +EM   G+ PD  +Y TL+   C   
Sbjct: 448 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSG 507

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ------------------------ 150
              +A+ +F EM   G+ PD+ + S LI +  + G+                        
Sbjct: 508 KWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCT 567

Query: 151 -----------LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
                      + +A   F +M+  G +P+ V    ++ G C++G +  AL++   ML  
Sbjct: 568 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 627

Query: 200 ------GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
                  C  + ++Y+ I++GLC+     EA +LF EM   GV PD  ++T+LIHG C+ 
Sbjct: 628 TSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRS 687

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G    A  LF+ M    ++PD+ T++ LID  CK G++ +AN+L   MI R   PN ++Y
Sbjct: 688 GKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 747

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             L+ G C    ++EA +L+ +M   G  P +V+  T++KG C++G+   A E   KM+S
Sbjct: 748 TTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLS 807

Query: 374 E------GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           +         PD ISY+ +I+G  +    D+A  L  +M+  G++P+VI+Y  ++ GFCR
Sbjct: 808 DTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCR 867

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
            G++ D++ +   M+++G+  +  TY+ +I+G   +  + +A 
Sbjct: 868 SGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 172/538 (31%), Positives = 274/538 (50%), Gaps = 54/538 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+ K+  A   L  M  +G   D VTY+TLI   C +  + EA QL  SM   G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML----QMGLS---PDTATYNTLLVESCRK 113
            +P    Y +L+ GLC+ G+ + A  +  EML    Q G+    PD  T + L+   C++
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
             + EA E+   M +RG   DIV++STLI       ++  A   F  M+  G  PD + Y
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEK------GCVMDVVTYNTILNGLCRAKMLTEADDL 227
             ++ G C+ G +  AL++  EML         C   +++Y+ I++GLC+ +   EA +L
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 480

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           F EM  +G+ PD  ++TTLIHG C  G   KA  LF+ M    I+PD+ T + LID  CK
Sbjct: 481 FEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 540

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G++ +ANKL   +I R    + ++   L+ G C    +++A +L+ +M   G  P +V+
Sbjct: 541 KGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVT 600

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSE--------------------------------- 374
           C T++KG C+SG+   A E    M+S+                                 
Sbjct: 601 CATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARE 660

Query: 375 --------GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
                   GV PD ISY +LI+GF R      A  L ++M + G+ PDV T++V++   C
Sbjct: 661 LFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLC 720

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++G++ ++  +L  MI++G  P+  TYTTL+ G    + + EA +   +M + G +PD
Sbjct: 721 KEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 778



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 170/544 (31%), Positives = 270/544 (49%), Gaps = 60/544 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL----MNSM 56
           ++  LC  H+I  A      M++ G  PD + Y TL+   C+ G +  A  L    +N  
Sbjct: 276 LIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT 335

Query: 57  SGKGLK---PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK 113
           S  G+K   P V T + LI+ LCK+G+   A E+L+ M+Q G   D  TY+TL+   C +
Sbjct: 336 SQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCME 395

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY---------------- 157
             +SEA  +F  M + G  PD +++ TL+    + G ++ AL                  
Sbjct: 396 HRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCK 455

Query: 158 -------------------------FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
                                    F EMK+ G++PD + YT +I+G+C +G   +A  +
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
            +EML+ G   DV T + +++ LC+   + EA+ L   +++RG   D  T TTL+ G C 
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR------KI 306
              ++KA  LF  M +    P++VT  TL+ G C+ G ++ A +L  +M+S         
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            PN ISY I+I+G C  G   EA  L+ EM   G+ P ++S  ++I G+CRSG    A  
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
             ++MV  GV PD  +++ LI+   +E  + +A  L+  M  +G +P+ +TY  ++ G C
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML----QRG-- 480
              R+ ++  +  +M + G  PD  TY TL+ G     N+K A   H +ML    Q G  
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815

Query: 481 FVPD 484
           F PD
Sbjct: 816 FKPD 819



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 211/403 (52%), Gaps = 39/403 (9%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           GL PD+ T+N L+   C  + ++E       + RRG  PDIV++S               
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYS--------------- 49

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
                      + PD    +++I+  C+ G V+EA ++ + M+++GC++D+VTY+T++ G
Sbjct: 50  -----------IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 98

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS---- 270
           LC    ++EA  LF  M + G  PD  T+ TL+ G C+ GN+N AL L   M   +    
Sbjct: 99  LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 158

Query: 271 --IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
              KP +++Y+ +IDG CK    ++A +L+ +M ++ + P+ ISY  LI+G+C  G   +
Sbjct: 159 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEK 218

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+ EM+  GI+P + +   +I  +C+ G   +A+E L  MV  G   D ++Y+TLI 
Sbjct: 219 AKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIK 278

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE----- 443
           G   +  + +A  L   M+  G  PD I Y  ++ G C+ G+++ +  +   M+      
Sbjct: 279 GLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQY 338

Query: 444 --KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             K + PD +T + LI+    +  + EA    + M+QRG + D
Sbjct: 339 GIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILD 381


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 265/485 (54%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +VNALCK+  + +A+MF C++ + G   DT    +L+ A CR   L EAF++   MS + 
Sbjct: 177 VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEE 236

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             +P   TY+ LI+GLC+ GR + A ++  EM++ G  P T TY  L+   C      +A
Sbjct: 237 NCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 296

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  EM+ +   P++ +++ LI    R G+++ A   FR+M   GL P  + +  +ING
Sbjct: 297 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 356

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G+V+ A ++   M +  C  ++ TYN ++ GLCR     +A  L   +++ G+ PD
Sbjct: 357 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 416

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+ G CK+G +N A N+F+ M    ++PD  T+  LIDG CK+G +E+AN +  
Sbjct: 417 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 476

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + IS + +++  LI+G+C +G   +   L+  MV      T  + N  +    +  
Sbjct: 477 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 536

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             ++A+  L KM+  G+ P  +++  LI G  R      +  ++ +M+  G  P+V TY 
Sbjct: 537 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 596

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +I+ G C  GR+ ++E IL+ M   G++P+  TY  L+  HV    L  AF+    M++ 
Sbjct: 597 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 656

Query: 480 GFVPD 484
           G  P+
Sbjct: 657 GCQPN 661



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 251/494 (50%), Gaps = 39/494 (7%)

Query: 27  YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE 86
           YP    Y+TL+    +      AF +   M  +G   G   Y +++N LCK G    A+ 
Sbjct: 136 YP---CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEM 192

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR-RGVAPDIVSFSTLIGIF 145
              ++L++G   DT    +L++ +CR++++ EA  +F +MS+     P+ V++S LI   
Sbjct: 193 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGL 252

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+L+ A    +EM   G  P    YT++I   C  G   +A+KM DEM  K CV +V
Sbjct: 253 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 312

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TY  +++ LCR   + EA+ +F +ML+ G+ P   TF  LI+G+CK+G +  A  L  +
Sbjct: 313 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 372

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M + + KP+I TYN L++G C+V +  KA  L   ++   + P+ ++Y IL++G+C  G 
Sbjct: 373 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 432

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  AF ++  M   G++P   +   +I G C+ G   +A+  L  MV +G+  D +++  
Sbjct: 433 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 492

Query: 386 LINGFVRE----------ENM-------------------------DKAFALVSKMENQG 410
           LI+G  +           ENM                         ++A A++ KM   G
Sbjct: 493 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 552

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           LVP V+T+ +++ G CR G    S  +L RM + G +P+  TYT +ING  +   ++EA 
Sbjct: 553 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 612

Query: 471 RFHDEMLQRGFVPD 484
                M   G  P+
Sbjct: 613 TILFSMSSFGVSPN 626



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 252/523 (48%), Gaps = 39/523 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C     D A   L EM  K   P+  TY  LI+  CREG +EEA  +   M   G
Sbjct: 283 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 342

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG+ T+N+LING CK+G    A ++L  M +    P+  TYN L+   CR     +A 
Sbjct: 343 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF 402

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   +   G+ PD V+++ L+  F + GQL+ A   F  M SAGL PD   +T +I+G 
Sbjct: 403 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 462

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A  +   M++KG  +D VT+  +++G C+     +   LF  M+E       
Sbjct: 463 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 522

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF   +    KD  +N+A  +   M +  + P +VT+  LI+G C+ GE   + K+   
Sbjct: 523 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 582

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     SPN  +Y I+ING C+ G V EA  + + M   G+ P   +   ++K + ++G 
Sbjct: 583 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 642

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFV-----------------------REEN-- 395
             +A + +S MV  G  P+S  Y+ L++GFV                        EEN  
Sbjct: 643 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 702

Query: 396 ------------MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
                       +D A  +  +++  G VP    YN ++ G C++GR+ +++ +   M++
Sbjct: 703 NCLSSHVFRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVK 761

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            GL PD++  +++I  +           F   +L   FVP  A
Sbjct: 762 HGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFA 803



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 255/522 (48%), Gaps = 37/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC++ KI+ A     +M + G+ P  +T+N LIN YC+EG++  AFQL++ M    
Sbjct: 318 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 377

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + TYN L+ GLC+  +  +A  +L  ++  GL PD  TYN L+   C++  ++ A 
Sbjct: 378 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 437

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  M+  G+ PD  +F+ LI    + G+L++A      M   G+  D V +T +I+G+
Sbjct: 438 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 497

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   +   + + M+E  C+    T+N  L+ L +   L EA+ +  +M++ G+ P  
Sbjct: 498 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 557

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T T LI GHC+ G    +L + + M Q    P++ TY  +I+G C  G +E+A  +   
Sbjct: 558 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 617

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  +SPN+ +Y +L+  +   G +  AF++   MV  G +P     + ++ G+  S  
Sbjct: 618 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 677

Query: 361 A-------SKADEFLSKMVSEGVDPDSIS-----------------------------YN 384
           A       S  D     + SE  D + +S                             YN
Sbjct: 678 AIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYN 737

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L+ G  +E  + +A  L   M   GL PD    ++I   +C+  +  +    +  +++ 
Sbjct: 738 FLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII-EHYCKTCKYDNCLEFMKLVLDN 796

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              P  ++Y  +I+G  ++  ++EA +   ++++   + ++ 
Sbjct: 797 KFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEV 838



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 186/362 (51%), Gaps = 1/362 (0%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M+  G       +STL+   ++      A + +R M + G V   + Y  ++N  C+NGF
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 186

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-ERGVFPDFYTFT 244
           V  A     ++L  G  +D     +++   CR   L EA  +F +M  E    P+  T++
Sbjct: 187 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYS 246

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LIHG C+ G + +A  L   M +K  +P   TY  LI   C +G  +KA K+  +M ++
Sbjct: 247 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 306

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              PN  +Y ILI+  C  G + EA  ++ +M+  G+ P +++ N +I GYC+ G    A
Sbjct: 307 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 366

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            + LS M      P+  +YN L+ G  R     KAF L+ ++ + GL+PD +TYN+++ G
Sbjct: 367 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 426

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           FC++G+++ +  I   M   GL PD  T+T LI+G      L++A      M+++G   D
Sbjct: 427 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 486

Query: 485 DA 486
           + 
Sbjct: 487 EV 488


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 156/464 (33%), Positives = 263/464 (56%), Gaps = 8/464 (1%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E++  GV  +  T   LI+  CR+  L++A   +    G+   P V ++N+L++G CK G
Sbjct: 225 EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMG 284

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D AK     M++ GL PD  +YN LL   C   +M EA E   +M   GV PDIV+++
Sbjct: 285 SVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYN 344

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            L   F   G +  A    + M   GL PD V YTI+I G+C+ G + E+ K++++ML +
Sbjct: 345 ILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQ 404

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  + +VTY  +L+ LC++  + EA  L +EM   G+ PD  T++         G + +A
Sbjct: 405 GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEA 456

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + L++ M  K I P+    + +I G  + G + +A   +  +    ++   I Y I+I+G
Sbjct: 457 IELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG 516

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y  +G++ EA R + +++ KGI PT+V+ N++I G+C+ G  ++A + L  +   G+ P 
Sbjct: 517 YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 576

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           S++Y TL+NG+  E +M   F ++ +ME + + P  ITY V++ G C++GR+H+S  +L 
Sbjct: 577 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 636

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            M  +GL PD+ TY T+I      ++L++AF+ H++MLQ    P
Sbjct: 637 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQP 680



 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 267/481 (55%), Gaps = 8/481 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +D AK F C M + G+ PD  +YN L++  C  G +EEA +  N M   G
Sbjct: 276 LMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHG 335

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TYN L NG    G    A +V+  ML  GL+PD  TY  L+   C+  N+ E+ 
Sbjct: 336 VEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF 395

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M  +G+   IV+++ L+    ++G++D A++   EM+  GL PD + Y+      
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS------ 449

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V EA+++ +EM  K    +    + I++GL     ++EA   F+ + +  V  + 
Sbjct: 450 --RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 507

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  +I G+ K GN+ +A+  +  + +K I P IVT+N+LI GFCK G++ +A KL   
Sbjct: 508 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 567

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P  ++Y  L+NGYC  G +   F + +EM  K IKPT ++   ++KG C+ G 
Sbjct: 568 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGR 627

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             ++ + L  M + G+ PD I+YNT+I  F +  ++ KAF L ++M    L P  +TYNV
Sbjct: 628 LHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNV 687

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C  G + D++ +L  + ++ +   +  YTT+I  H ++ +++ A  F  +M++RG
Sbjct: 688 LINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG 747

Query: 481 F 481
           F
Sbjct: 748 F 748



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 245/473 (51%), Gaps = 8/473 (1%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           I  A   +  M   G+ PD VTY  LI  +C+ G +EE+F+L   M  +GLK  + TY  
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++ LCK GR D A  +L EM  +GL PD  TY+   VE        EA E++ EM  + 
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVE--------EAIELYEEMCSKR 467

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + P+    S +I      G +  A MYF  +  + +  + +LY I+I+GY + G + EA+
Sbjct: 468 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 527

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           +   +++EKG    +VT+N+++ G C+   L EA  L + +   G+ P   T+TTL++G+
Sbjct: 528 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 587

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C++G+M+   ++   M  K+IKP  +TY  ++ G CK G + ++ +L   M +R + P+ 
Sbjct: 588 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 647

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           I+Y  +I  +C    + +AF+L  +M+   ++P+ V+ N +I G C  G+   AD  L  
Sbjct: 648 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 707

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           +  + +    ++Y T+I     + ++  A     +M  +G    +  Y+ ++   C++  
Sbjct: 708 LQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNL 767

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           + D++     M+  G+ PD+     ++N      +    F     M++ G +P
Sbjct: 768 ITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 217/413 (52%), Gaps = 8/413 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCK  +ID A + L EME  G+ PD +TY+         G +EEA +L   M  K 
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKR 467

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  F  +++I+GL +KG    A+   D + +  ++ +   YN ++    +  N+ EA 
Sbjct: 468 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 527

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + ++  +G++P IV+F++LI  F + G+L  A+     +K  GLVP +V YT ++NGY
Sbjct: 528 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 587

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +     M  EM  K      +TY  ++ GLC+   L E+  L   M  RG+FPD 
Sbjct: 588 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 647

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I   CK  ++ KA  L + M Q S++P  VTYN LI+G C  G ++ A++L   
Sbjct: 648 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 707

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + I    ++Y  +I  +C+ G V  A   +++MV +G + ++   + +I   C+   
Sbjct: 708 LQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNL 767

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
            + A  F   M++ G+ PD      ++N F R  + +  F + + M   GL+P
Sbjct: 768 ITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 183/367 (49%), Gaps = 29/367 (7%)

Query: 136 VSFSTLIGIFSRNGQ---LDRALMYFREMKSAGLVP---------------DNVLYTIII 177
           VS+  +  + +R GQ   L R L    E + +G  P               +NV++ ++ 
Sbjct: 116 VSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLA 175

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
             Y R   V +AL +  +M      + + TYN++L  L    ++    D++NE+   GV 
Sbjct: 176 CAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMW---DVYNEIKASGVP 232

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            + YT   LI G C+   +  A+        +   P +V++N L+ GFCK+G ++ A   
Sbjct: 233 QNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSF 292

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  MI   + P+  SY IL++G C  G + EA     +M   G++P +V+ N +  G+  
Sbjct: 293 FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRI 352

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G  S A + + +M+  G++PD ++Y  LI G  +  N++++F L  KM +QGL   ++T
Sbjct: 353 LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVT 412

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y V+L+  C+ GR+ ++ ++L  M   GL PD  TY        S+  ++EA   ++EM 
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY--------SRGAVEEAIELYEEMC 464

Query: 478 QRGFVPD 484
            +   P+
Sbjct: 465 SKRIYPN 471


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 159/514 (30%), Positives = 263/514 (51%), Gaps = 32/514 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A   L +M ++G  P+ VTY  L+ A C+    E+A  +++ M  KG
Sbjct: 148 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG 207

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +ING+C++GR D A+++L+ +   G  PDT +Y TLL   C  +   + E
Sbjct: 208 CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVE 267

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F EM  +   P+ V+F  LI  F R G ++RA+   ++M       +  L  I+IN  
Sbjct: 268 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSI 327

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A K  + M   GC  D ++Y T+L GLCRA+   +A +L  EM+     P+ 
Sbjct: 328 CKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNE 387

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW-- 298
            TF T I   C+ G + +A+ L + M +      +VTYN L++GFC  G ++ A +L+  
Sbjct: 388 VTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 447

Query: 299 ------------------------------ADMISRKISPNYISYGILINGYCSMGHVTE 328
                                         A+M+ R   PN +++ +L+N +C  G + E
Sbjct: 448 MPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDE 507

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  +M+  G  P L++ NT+  G  +   +  A E L  +VS+GV PD I+++++I 
Sbjct: 508 AIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 567

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              +E+ +++A  +    ++ G+ P  + YN IL G C++  + ++   L  M+  G  P
Sbjct: 568 ILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMP 627

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           + STY  LI G   +  LKEA      +  RG V
Sbjct: 628 NESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 237/472 (50%), Gaps = 6/472 (1%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLI 72
           +A++      + G  PD      LI   CR G   +A +++ +  G G    VF YN+L+
Sbjct: 58  AARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 117

Query: 73  NGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA 132
            G C+ G  D A+ ++     M ++PD  TY  L+   C +  +++A  +  +M RRG  
Sbjct: 118 AGYCRYGHLDAARRLIG---SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ 174

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
           P++V+++ L+    +N   ++A+    EM++ G  P+ V Y +IING CR G V +A  +
Sbjct: 175 PNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDL 234

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
            + +   GC  D V+Y T+L GLC +K   + ++LF EM+E+   P+  TF  LI   C+
Sbjct: 235 LNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCR 294

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            G + +A+ +   MT+     +    N +I+  CK G ++ A K   +M S   +P+ IS
Sbjct: 295 GGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTIS 354

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y  ++ G C      +A  L  EMV     P  V+ NT I   C+ G   +A   + +M 
Sbjct: 355 YTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ 414

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
             G     ++YN L+NGF  + ++D A  L   M  +   P+ ITY  +LTG C   R+ 
Sbjct: 415 EHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLD 471

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  ++  M+ +   P+  T+  L+N    +  L EA    ++M++ G  P+
Sbjct: 472 AAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPN 523



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 240/484 (49%), Gaps = 6/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  +   A   L   E  G   D   YNTL+  YCR G L+ A +L+ SM    
Sbjct: 81  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP--- 137

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TY  LI  LC +GR   A  +LD+ML+ G  P+  TY  LL   C+     +A 
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G  P+IV+++ +I    R G++D A      + S G  PD V YT ++ G 
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +    +  ++  EM+EK C+ + VT++ ++   CR  M+  A  +  +M E     + 
Sbjct: 258 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNT 317

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                +I+  CK G ++ A    + M      PD ++Y T++ G C+      A +L  +
Sbjct: 318 TLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKE 377

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     PN +++   I   C  G + +A  L  +M   G    +V+ N ++ G+C  G 
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E    M  +   P++I+Y TL+ G    E +D A  LV++M ++   P+V+T+NV
Sbjct: 438 IDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNV 494

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++  FC++G + ++  ++ +M+E G  P+  TY TL +G     + ++A      ++ +G
Sbjct: 495 LVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG 554

Query: 481 FVPD 484
             PD
Sbjct: 555 VSPD 558



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 233/478 (48%), Gaps = 9/478 (1%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K H + +A     E       P +     LI    RE     A  +  S S  G  P V+
Sbjct: 20  KPHHLAAAAATRPESPNVAPNPASARLRRLI---AREDLAGAARLVELSASRDGEAPDVY 76

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
               LI  LC++GR   A  VL      G   D   YNTL+   CR  ++  A  +   M
Sbjct: 77  LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM 136

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
               VAPD  +++ LI +    G++  AL    +M   G  P+ V YT+++   C+N   
Sbjct: 137 P---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGF 193

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A+ + DEM  KGC  ++VTYN I+NG+CR   + +A DL N +   G  PD  ++TTL
Sbjct: 194 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTL 253

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           + G C     +    LF  M +K+  P+ VT++ LI  FC+ G +E+A ++   M   + 
Sbjct: 254 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHEC 313

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           + N     I+IN  C  G V +AF+    M   G  P  +S  T++KG CR+   + A E
Sbjct: 314 ATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKE 373

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            L +MV     P+ +++NT I    ++  +++A  L+ +M+  G    V+TYN ++ GFC
Sbjct: 374 LLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFC 433

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            QG + DS L L+R +     P+  TYTTL+ G  +   L  A     EML R   P+
Sbjct: 434 VQGHI-DSALELFRSMP--CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPN 488



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 172/355 (48%), Gaps = 4/355 (1%)

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           VAP+  S + L  + +R      A +        G  PD  L T +I   CR G   +A 
Sbjct: 37  VAPNPAS-ARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAA 95

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++       G  +DV  YNT++ G CR   L  A  L   M    V PD YT+T LI   
Sbjct: 96  RVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVL 152

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C  G +  AL+L D M ++  +P++VTY  L++  CK    E+A  +  +M ++  +PN 
Sbjct: 153 CDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNI 212

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y ++ING C  G V +A  L   +   G +P  VS  T++KG C S      +E  ++
Sbjct: 213 VTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAE 272

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ +   P+ ++++ LI  F R   +++A  ++ +M       +    N+++   C+QGR
Sbjct: 273 MMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGR 332

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           + D+   L  M   G NPD  +YTT++ G        +A     EM++    P++
Sbjct: 333 VDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNE 387



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 87/172 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN  C+   +D A   + +M + G  P+ +TYNTL +   ++   E+A +L++ +  KG
Sbjct: 495 LVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG 554

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T++S+I  L K+ R + A ++      +G+ P    YN +L+  C++  +  A 
Sbjct: 555 VSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAI 614

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           +    M   G  P+  ++  LI   +R G L  A      + S G+V  N++
Sbjct: 615 DFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNLI 666


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 159/486 (32%), Positives = 274/486 (56%), Gaps = 9/486 (1%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +++++++ ++F  +M + G++P   T+N L++  C++G L+E  +L+N +   G+ P +F
Sbjct: 194 ENYQVEAYELF-NKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLF 252

Query: 67  TYNSLINGLCKKG-------RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           T+N  I GLC+KG       +   A+  L +M+  GL PD  TYNT++    +   + +A
Sbjct: 253 TFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDA 312

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             I  +   +G  PD  ++ +LI    ++G +D AL  F E    GL P  VLY  +I G
Sbjct: 313 SRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKG 372

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G VL+AL++ ++M ++G   D+ TYN ++NGLC+   +++A++L N  + +G  PD
Sbjct: 373 LSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPD 432

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +TF TLI G+CK   M+ A+ + D M    + PD++TYN++++G CK  + E   + + 
Sbjct: 433 IFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFK 492

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            ++ +   PN I+Y ILI   C    VTEA  L  E+  +G+ P  VS  T+I G+C +G
Sbjct: 493 MIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNG 552

Query: 360 DASKADEFLSKMVSEGVDPDSIS-YNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           D  +A +   +M  +     +++ YN +IN F  + +MD A  L  +M ++G  PD  TY
Sbjct: 553 DLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTY 612

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            V++ GFC+ G ++     L + IE G  P  +T+  +IN    Q+ + EA      M++
Sbjct: 613 RVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVR 672

Query: 479 RGFVPD 484
            G VP+
Sbjct: 673 TGVVPE 678



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 270/526 (51%), Gaps = 43/526 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +    + A      M+ +G+ PD  T+   I ++CR      A +L+N+M  +G
Sbjct: 117 IMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +     Y ++I+G  ++     A E+ ++ML++G+ P  AT+N L+   C+K ++ E E
Sbjct: 177 CELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGE 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD-------RALMYFREMKSAGLVPDNVLY 173
           ++  ++ + GV P++ +F+  I    R G L+        A  Y  +M + GL PD+  Y
Sbjct: 237 KLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTY 296

Query: 174 TIIINGY-----------------------------------CRNGFVLEALKMRDEMLE 198
             II GY                                   C++G +  AL + +E L 
Sbjct: 297 NTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALG 356

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
           KG    +V YNT++ GL +  ++ +A  L N+M + G+ PD +T+  +I+G CK G ++ 
Sbjct: 357 KGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSD 416

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A NL +    K   PDI T+NTLIDG+CK  +M+ A  +   M S  ++P+ I+Y  ++N
Sbjct: 417 ANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILN 476

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G C      +    +  ++ KG  P +++ N +I+  C++   ++A + L ++ + G+ P
Sbjct: 477 GLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIP 536

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQ-GLVPDVITYNVILTGFCRQGRMHDSELI 437
           D +S+ T+I+GF    ++D+A+ L  +ME Q  +   V TYN+++  F  +  M  ++ +
Sbjct: 537 DPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKL 596

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              M +KG +PD  TY  +I+G     N+   + F  + ++ GFVP
Sbjct: 597 FHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVP 642



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 235/459 (51%), Gaps = 7/459 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   +YN ++N     G+  +A ++   M  +G+ P V T+   I   C+  R   A  +
Sbjct: 109 PSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRL 168

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ M   G   +   Y T++     +    EA E+F +M R G+ P I +F+ L+ I  +
Sbjct: 169 LNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCK 228

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF-------VLEALKMRDEMLEKG 200
            G L        ++   G+ P+   + I I G CR G        V+EA     +M+ KG
Sbjct: 229 KGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKG 288

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D  TYNTI+ G  +   + +A  +  +   +G  PD +T+ +LI G C+DG+++ AL
Sbjct: 289 LEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHAL 348

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            LF+    K +KP IV YNTLI G  + G + KA +L  DM    +SP+  +Y ++ING 
Sbjct: 349 ALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGL 408

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C MG V++A  L    + KG  P + + NT+I GYC+      A   L  M S GV PD 
Sbjct: 409 CKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDV 468

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           I+YN+++NG  +    +        +  +G +P++ITYN+++   C+  ++ ++  +L  
Sbjct: 469 ITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEE 528

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +  +GL PD  ++ T+I+G  +  +L EA++    M Q+
Sbjct: 529 IRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQ 567



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 224/446 (50%), Gaps = 9/446 (2%)

Query: 48  EAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM-LQMGLSPDTATYNT 105
           +A  + NS+  + G K    TY  +I  L   G  D  + VL EM L +  S     Y +
Sbjct: 22  KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVS 81

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
            +    RK  + EA ++F  M      P I S++ ++ I    G  ++A   +  MK  G
Sbjct: 82  AMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEG 141

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           + PD   +TI I  +CR    L AL++ + M  +GC ++ V Y T+++G        EA 
Sbjct: 142 IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAY 201

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +LFN+ML  G+FP   TF  L+H  CK G++ +   L + + +  + P++ T+N  I G 
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGL 261

Query: 286 CKVGEMEKANKLWAD-------MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           C+ G +E AN    +       M+++ + P+  +Y  +I GY  +G + +A R+  +   
Sbjct: 262 CRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKF 321

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           KG  P   +  ++I G C+ GD   A     + + +G+ P  + YNTLI G  ++  + K
Sbjct: 322 KGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLK 381

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  L++ M  +G+ PD+ TYN+++ G C+ G + D+  +L   I KG  PD  T+ TLI+
Sbjct: 382 ALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLID 441

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G+  +  +  A    D M   G  PD
Sbjct: 442 GYCKRLKMDNAIGILDSMWSHGVTPD 467



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 212/376 (56%), Gaps = 7/376 (1%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           KI  A   L + + KG  PD  TY +LI   C++G ++ A  L     GKGLKP +  YN
Sbjct: 308 KIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYN 367

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +LI GL ++G   +A +++++M + G+SPD  TYN ++   C+   +S+A  +      +
Sbjct: 368 TLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAK 427

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF---V 186
           G  PDI +F+TLI  + +  ++D A+     M S G+ PD + Y  I+NG C+      V
Sbjct: 428 GYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDV 487

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
           +E  KM   ++EKGC+ +++TYN ++  LC+A+ +TEA DL  E+  RG+ PD  +F T+
Sbjct: 488 METFKM---IMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTV 544

Query: 247 IHGHCKDGNMNKALNLFDIMTQK-SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           I G C +G++++A  LF  M Q+  I   + TYN +I+ F +  +M+ A KL+ +M  + 
Sbjct: 545 ISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKG 604

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+  +Y ++I+G+C +G+V   +    + +  G  P+L +   +I   C      +A 
Sbjct: 605 CDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAV 664

Query: 366 EFLSKMVSEGVDPDSI 381
             +  MV  GV P+++
Sbjct: 665 GIVHLMVRTGVVPEAV 680



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 179/347 (51%), Gaps = 1/347 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  +C+D  ID A     E   KG+ P  V YNTLI    ++G + +A QLMN MS +G
Sbjct: 334 LIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEG 393

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P ++TYN +INGLCK G    A  +L+  +  G  PD  T+NTL+   C++  M  A 
Sbjct: 394 MSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAI 453

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   GV PD++++++++    +  + +  +  F+ +   G +P+ + Y I+I   
Sbjct: 454 GILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESL 513

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER-GVFPD 239
           C+   V EAL + +E+  +G + D V++ T+++G C    L EA  LF  M ++  +   
Sbjct: 514 CKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHT 573

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +I+   +  +M+ A  LF  M  K   PD  TY  +IDGFCKVG +        
Sbjct: 574 VATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLL 633

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
             I     P+  ++G +IN  C    V EA  + + MV  G+ P  V
Sbjct: 634 KEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAV 680



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 132/251 (52%), Gaps = 7/251 (2%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            + + +  + + G + +A+++F+ M   + +P I +YN +++   + G   +A+K++  M
Sbjct: 78  VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM 137

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
               I+P+  ++ I I  +C       A RL   M  +G +   V   T+I G+      
Sbjct: 138 KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQ 197

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A E  +KM+  G+ P   ++N L++   ++ ++ +   L++K+   G+ P++ T+N+ 
Sbjct: 198 VEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIF 257

Query: 422 LTGFCRQG-------RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           + G CR+G       ++ ++E  L +M+ KGL PD  TY T+I G+     +++A R   
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK 317

Query: 475 EMLQRGFVPDD 485
           +   +GFVPD+
Sbjct: 318 DAKFKGFVPDE 328



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 1/173 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           ++ +LCK  K+  A   L E+  +G+ PD V++ T+I+ +C  G L+EA+QL   M  + 
Sbjct: 509 LIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQY 568

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +   V TYN +IN   +K   D A+++  EM   G  PD+ TY  ++   C+  N++  
Sbjct: 569 RICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSG 628

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
            +   +    G  P + +F  +I       ++  A+     M   G+VP+ V+
Sbjct: 629 YDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 160/496 (32%), Positives = 266/496 (53%), Gaps = 16/496 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G +P  VT++TL++  C E  + EA    + +    
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQIC--- 173

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V  + +L+NGLC++GR   A  +LD M++ GL P+  TY T++   C+  +   A 
Sbjct: 174 -KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M     + P++V +S +I    ++G+   A   F EM+  G+ P+   Y  +ING
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   EA ++  EM E+    DVVT++ ++N L +     EA++L+NEML RG+ P+
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPN 352

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ ++I G  K   ++ A  +F +M  K   PD++T++ LIDG+C    ++   KL  
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH 412

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R +  N I+Y  LI+G+C +G++  A  L  EM+  G+ P +V+CNT++ G C +G
Sbjct: 413 EMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNG 472

Query: 360 DASKADEFLSKMVSEGVD-----------PDSISYNTLINGFVREENMDKAFALVSKMEN 408
               A E    M    +D           PD  +YN LI G + E    +A  L  +M +
Sbjct: 473 KLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPH 532

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +GLVPD ITYN ++ G C+Q R+ ++  +   M  KG +PD  T+TTLING+     + +
Sbjct: 533 RGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGD 592

Query: 469 AFRFHDEMLQRGFVPD 484
                 EM +RG V +
Sbjct: 593 GLEVFCEMGRRGIVAN 608



 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 155/483 (32%), Positives = 264/483 (54%), Gaps = 12/483 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC++ ++  A   L  M + G+ P+ +TY T+++  C+ G    A  L+  M    
Sbjct: 183 LMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVS 242

Query: 61  -LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +KP V  Y+++I+GL K GR   A+ +  EM + G+SP+  TYN ++   C     SEA
Sbjct: 243 RIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEA 302

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +  EM  R ++PD+V+FS LI    + G+   A   + EM   G++P+ + Y  +I+G
Sbjct: 303 QRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDG 362

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + +   +  A +M   M  KGC  DV+T++ +++G C AK + +   L +EM  RG+  +
Sbjct: 363 FSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVAN 422

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTLIHG C+ GN+N AL+L   M    + P++VT NTL+DG C  G+++ A +++ 
Sbjct: 423 TITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFK 482

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+  +Y ILI G  + G  +EA  L+ EM  +G+ P  ++ 
Sbjct: 483 VMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITY 542

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N++I G C+     +A +    M S+G  PD +++ TLING+ +   +     +  +M  
Sbjct: 543 NSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGR 602

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V + ITY  ++ GFC+ G ++ +  I   MI  G+ PD  T   ++ G  S+  LK 
Sbjct: 603 RGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 662

Query: 469 AFR 471
           A +
Sbjct: 663 AVQ 665



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 251/470 (53%), Gaps = 18/470 (3%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +  L+    R    +    L   M  + +   ++++  LI   C   +   A   
Sbjct: 74  PCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALST 133

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++ ++G  P   T++TLL   C ++ +SEA   F ++ +    P++++F+TL+    R
Sbjct: 134 FGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLCR 189

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVV 206
            G++  A+     M   GL P+ + Y  I++G C+ G  + AL +  +M E   +  +VV
Sbjct: 190 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVV 249

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            Y+ I++GL +    T+A +LF+EM E+G+ P+ +T+  +I+G C  G  ++A  L   M
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ + PD+VT++ LI+   K G+  +A +L+ +M+ R I PN I+Y  +I+G+     +
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRL 369

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A R++Y M  KG  P +++ + +I GYC +       + L +M   G+  ++I+Y TL
Sbjct: 370 DAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTL 429

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG- 445
           I+GF +  N++ A  L+ +M + G+ P+V+T N +L G C  G++ D+ L ++++++K  
Sbjct: 430 IHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA-LEMFKVMQKSK 488

Query: 446 -----------LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                      + PD  TY  LI G +++    EA   ++EM  RG VPD
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPD 538



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 222/414 (53%), Gaps = 46/414 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L KD +   A+    EM++KG+ P+  TYN +IN +C  G   EA +L+  M  + 
Sbjct: 254 IIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERK 313

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T++ LIN L K+G+   A+E+ +EML  G+ P+T TYN+++    ++  +  AE
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAE 373

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+ +G +PD+++FS LI  +    ++D  +    EM   GLV + + YT +I+G+
Sbjct: 374 RMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGF 433

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC----------------RAKM---- 220
           C+ G +  AL +  EM+  G   +VVT NT+L+GLC                ++KM    
Sbjct: 434 CQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDA 493

Query: 221 --------------------------LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
                                      +EA++L+ EM  RG+ PD  T+ ++I G CK  
Sbjct: 494 SHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQS 553

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            +++A  +FD M  K   PD+VT+ TLI+G+CKVG +    +++ +M  R I  N I+Y 
Sbjct: 554 RLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYR 613

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
            LI+G+C +G++  A  ++ EM+  G+ P  ++   ++ G     +  +A + L
Sbjct: 614 TLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 216/404 (53%), Gaps = 5/404 (1%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D A ++   M++    P    +  LL    R E       +  +M  R +  +I SF+ L
Sbjct: 58  DDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTIL 117

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F    +L  AL  F ++   G  P  V ++ +++G C    V EAL    ++    C
Sbjct: 118 IKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----C 173

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             +V+ + T++NGLCR   + EA  L + M+E G+ P+  T+ T++ G CK G+   ALN
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233

Query: 262 LFDIMTQKS-IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           L   M + S IKP++V Y+ +IDG  K G    A  L+++M  + ISPN  +Y  +ING+
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           CS G  +EA RL  EM  + + P +V+ + +I    + G   +A+E  ++M+  G+ P++
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           I+YN++I+GF ++  +D A  +   M  +G  PDVIT+++++ G+C   R+ D   +L  
Sbjct: 354 ITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHE 413

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M  +GL  +  TYTTLI+G     NL  A     EM+  G  P+
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPN 457



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 210/374 (56%), Gaps = 9/374 (2%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL- 172
           + + +A ++F  M R    P ++ F  L+G+  R  + D  +   R+M+    +P N+  
Sbjct: 55  KGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMR-RIPCNIYS 113

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           +TI+I  +C    +  AL    ++ + G    +VT++T+L+GLC    ++EA   F+++ 
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQIC 173

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
           +    P+   FTTL++G C++G + +A+ L D M +  ++P+ +TY T++DG CK+G+  
Sbjct: 174 K----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229

Query: 293 KANKLWADM--ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
            A  L   M  +SR I PN + Y  +I+G    G  T+A  L+ EM  KGI P L + N 
Sbjct: 230 SALNLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNC 288

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I G+C SG  S+A   L +M    + PD ++++ LIN  V+E    +A  L ++M  +G
Sbjct: 289 MINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRG 348

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           ++P+ ITYN ++ GF +Q R+  +E + + M  KG +PD  T++ LI+G+     + +  
Sbjct: 349 IIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGM 408

Query: 471 RFHDEMLQRGFVPD 484
           +   EM +RG V +
Sbjct: 409 KLLHEMSRRGLVAN 422



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 5/273 (1%)

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           +G    K L +A DLF  M+     P    F  L+    +    +  ++L   M  + I 
Sbjct: 49  SGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIP 108

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            +I ++  LI  FC   ++  A   +  +      P+ +++  L++G C    V+EA   
Sbjct: 109 CNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHF 168

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           ++++     KP +++  T++ G CR G   +A   L +MV +G+ P+ I+Y T+++G  +
Sbjct: 169 FHQIC----KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 224

Query: 393 EENMDKAFALVSKMENQGLV-PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
             +   A  L+ KME    + P+V+ Y+ I+ G  + GR  D++ +   M EKG++P+  
Sbjct: 225 MGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLF 284

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TY  +ING  S     EA R   EM +R   PD
Sbjct: 285 TYNCMINGFCSSGRWSEAQRLLREMFERKMSPD 317



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 4/196 (2%)

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           L  GF ++  ++ A  L+  M+  +  P  I +  L+     M        L  +M  + 
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           I   + S   +IK +C       A     K+   G  P  ++++TL++G   E+ + +A 
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
                  +Q   P+VI +  ++ G CR+GR+ ++  +L RM+E GL P++ TY T+++G 
Sbjct: 167 HFF----HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 461 VSQNNLKEAFRFHDEM 476
               +   A     +M
Sbjct: 223 CKMGDTVSALNLLRKM 238


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 265/485 (54%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +VNALCK+  + +A+MF C++ + G   DT    +L+ A CR   L EAF++   MS + 
Sbjct: 134 VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEE 193

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             +P   TY+ LI+GLC+ GR + A ++  EM++ G  P T TY  L+   C      +A
Sbjct: 194 SCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 253

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  EM+ +   P++ +++ LI    R G+++ A   FR+M   GL P  + +  +ING
Sbjct: 254 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 313

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G+V+ A ++   M +  C  ++ TYN ++ GLCR     +A  L   +++ G+ PD
Sbjct: 314 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 373

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+ G CK+G +N A N+F+ M    ++PD  T+  LIDG CK+G +E+AN +  
Sbjct: 374 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 433

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + IS + +++  LI+G+C +G   +   L+  MV      T  + N  +    +  
Sbjct: 434 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 493

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             ++A+  L KM+  G+ P  +++  LI G  R      +  ++ +M+  G  P+V TY 
Sbjct: 494 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 553

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +I+ G C  GR+ ++E IL+ M   G++P+  TY  L+  HV    L  AF+    M++ 
Sbjct: 554 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 613

Query: 480 GFVPD 484
           G  P+
Sbjct: 614 GCQPN 618



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 251/494 (50%), Gaps = 39/494 (7%)

Query: 27  YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE 86
           YP    Y+TL+    +      AF +   M  +G   G   Y +++N LCK G    A+ 
Sbjct: 93  YP---CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEM 149

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR-RGVAPDIVSFSTLIGIF 145
              ++L++G   DT    +L++ +CR++++ EA  +F +MS+     P+ V++S LI   
Sbjct: 150 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGL 209

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+L+ A    +EM   G  P    YT++I   C  G   +A+KM DEM  K CV +V
Sbjct: 210 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 269

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TY  +++ LCR   + EA+ +F +ML+ G+ P   TF  LI+G+CK+G +  A  L  +
Sbjct: 270 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 329

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M + + KP+I TYN L++G C+V +  KA  L   ++   + P+ ++Y IL++G+C  G 
Sbjct: 330 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 389

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  AF ++  M   G++P   +   +I G C+ G   +A+  L  MV +G+  D +++  
Sbjct: 390 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 449

Query: 386 LINGFVRE----------ENM-------------------------DKAFALVSKMENQG 410
           LI+G  +           ENM                         ++A A++ KM   G
Sbjct: 450 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 509

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           LVP V+T+ +++ G CR G    S  +L RM + G +P+  TYT +ING  +   ++EA 
Sbjct: 510 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 569

Query: 471 RFHDEMLQRGFVPD 484
                M   G  P+
Sbjct: 570 TILFSMSSFGVSPN 583



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 252/523 (48%), Gaps = 39/523 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C     D A   L EM  K   P+  TY  LI+  CREG +EEA  +   M   G
Sbjct: 240 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG+ T+N+LING CK+G    A ++L  M +    P+  TYN L+   CR     +A 
Sbjct: 300 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF 359

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   +   G+ PD V+++ L+  F + GQL+ A   F  M SAGL PD   +T +I+G 
Sbjct: 360 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 419

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A  +   M++KG  +D VT+  +++G C+     +   LF  M+E       
Sbjct: 420 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 479

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF   +    KD  +N+A  +   M +  + P +VT+  LI+G C+ GE   + K+   
Sbjct: 480 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 539

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     SPN  +Y I+ING C+ G V EA  + + M   G+ P   +   ++K + ++G 
Sbjct: 540 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 599

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFV-----------------------REEN-- 395
             +A + +S MV  G  P+S  Y+ L++GFV                        EEN  
Sbjct: 600 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 659

Query: 396 ------------MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
                       +D A  +  +++  G VP    YN ++ G C++GR+ +++ +   M++
Sbjct: 660 NCLSSHVFRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVK 718

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            GL PD++  +++I  +           F   +L   FVP  A
Sbjct: 719 HGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFA 760



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 255/522 (48%), Gaps = 37/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC++ KI+ A     +M + G+ P  +T+N LIN YC+EG++  AFQL++ M    
Sbjct: 275 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 334

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + TYN L+ GLC+  +  +A  +L  ++  GL PD  TYN L+   C++  ++ A 
Sbjct: 335 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 394

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  M+  G+ PD  +F+ LI    + G+L++A      M   G+  D V +T +I+G+
Sbjct: 395 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 454

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   +   + + M+E  C+    T+N  L+ L +   L EA+ +  +M++ G+ P  
Sbjct: 455 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 514

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T T LI GHC+ G    +L + + M Q    P++ TY  +I+G C  G +E+A  +   
Sbjct: 515 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 574

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  +SPN+ +Y +L+  +   G +  AF++   MV  G +P     + ++ G+  S  
Sbjct: 575 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 634

Query: 361 A-------SKADEFLSKMVSEGVDPDSIS-----------------------------YN 384
           A       S  D     + SE  D + +S                             YN
Sbjct: 635 AIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYN 694

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L+ G  +E  + +A  L   M   GL PD    ++I   +C+  +  +    +  +++ 
Sbjct: 695 FLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII-EHYCKTCKYDNCLEFMKLVLDN 753

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              P  ++Y  +I+G  ++  ++EA +   ++++   + ++ 
Sbjct: 754 KFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEV 795



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 186/362 (51%), Gaps = 1/362 (0%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M+  G       +STL+   ++      A + +R M + G V   + Y  ++N  C+NGF
Sbjct: 84  MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 143

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-ERGVFPDFYTFT 244
           V  A     ++L  G  +D     +++   CR   L EA  +F +M  E    P+  T++
Sbjct: 144 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYS 203

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LIHG C+ G + +A  L   M +K  +P   TY  LI   C +G  +KA K+  +M ++
Sbjct: 204 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 263

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              PN  +Y ILI+  C  G + EA  ++ +M+  G+ P +++ N +I GYC+ G    A
Sbjct: 264 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 323

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            + LS M      P+  +YN L+ G  R     KAF L+ ++ + GL+PD +TYN+++ G
Sbjct: 324 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 383

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           FC++G+++ +  I   M   GL PD  T+T LI+G      L++A      M+++G   D
Sbjct: 384 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 443

Query: 485 DA 486
           + 
Sbjct: 444 EV 445


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 263/484 (54%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K+ +I +A   L EME+  V P+ V Y+ LI+  C++GF+ +A  L + +  +G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TYNSLI+G C  GR     ++L +M++  + PD  T+N L+   C++  + EA+
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   MS+RG  PDIV+++ L+  +     +  A   F  M   GL PD + Y ++I+GY
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA+ +  E+  K  V  + +YN++++GLC +  ++    L +EM      PD 
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   CK+G + +AL +  +M +K +KP+IVTYN ++DG+C    +  A  ++  
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P+ ++Y +LINGYC    V EA  L+ EM  K + P + S N++I G C  G 
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E L +M   G  PD I+YN L++ F + +  DKA +L  ++  +G+ PD  T + 
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHA 584

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+   C+  ++  +E  L  ++  G +P+  TYT LIN      +  EA     +M    
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644

Query: 481 FVPD 484
             PD
Sbjct: 645 RPPD 648



 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 153/481 (31%), Positives = 261/481 (54%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C+   +D A      M +    P T  ++ L+ A  R G    A  L   +  KG+ P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            T+  LIN    +     A  +L  +L+ G  P+  T+NT++   C    + +A +    
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           +  +G   D  ++ TLI   S+NGQ+  AL   +EM+ + + P+ V+Y+ +I+G C++GF
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V +AL +  ++ E+G ++D VTYN++++G C      E   L  +M+   V PD YTF  
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI   CK+G + +A  +  +M+++  KPDIVTYN L++G+C    + +A +L+  M+ R 
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           + P+ ++Y +LI+GYC    V EA  L+ E+  K + PT+ S N++I G C SG  S   
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           + L +M      PD ++YN LI+   +E  + +A  ++  M  +G+ P+++TYN ++ G+
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C +  ++ ++ I  RM++ GL PD   Y  LING+     + EA     EM  +  +PD 
Sbjct: 451 CLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI 510

Query: 486 A 486
           A
Sbjct: 511 A 511



 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 152/481 (31%), Positives = 263/481 (54%), Gaps = 3/481 (0%)

Query: 6   CKDHKIDSAKMF--LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           C  H+  +A  F  L  + + G  P+ VT+NT+IN +C  G + +A     ++  +G   
Sbjct: 99  CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
             FTY +LINGL K G+   A  +L EM +  + P+   Y+ L+   C+   +S+A  + 
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            ++  RG+  D V++++LI      G+         +M    + PD+  + I+I+  C+ 
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G +LEA  +   M ++G   D+VTYN ++ G C  + + EA +LFN M++RG+ PD   +
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             LI G+CK   +++A+ LF  +  K++ P I +YN+LIDG C  G +    KL  +M  
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
               P+ ++Y ILI+  C  G + EA  +   M+ KG+KP +V+ N ++ GYC   + + 
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A +  ++MV  G++PD ++YN LING+ + E +D+A  L  +M ++ L+PD+ +YN ++ 
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G C  GR+   + +L  M + G +PD  TY  L++         +A     ++++ G  P
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWP 577

Query: 484 D 484
           D
Sbjct: 578 D 578



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 257/481 (53%), Gaps = 36/481 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCKD  +  A     ++ ++G+  D VTYN+LI+  C  G  +E  QL+  M  + 
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T+N LI+ LCK+GR   A+ VL  M + G  PD  TYN L+   C +EN+ EA 
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP------------ 168
           E+F  M +RG+ PD+++++ LI  + +   +D A++ F+E+ +  LVP            
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380

Query: 169 -----------------------DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                                  D V Y I+I+  C+ G +LEAL +   M++KG   ++
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNI 440

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYN +++G C    +  A D+FN M++ G+ PD   +  LI+G+CK   +++A+ LF  
Sbjct: 441 VTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE 500

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K++ PDI +YN+LIDG C +G +    +L  +M     SP+ I+Y IL++ +C    
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQP 560

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +A  L+ ++V +GI P   + + I+   C+      A++ L  ++  G  P+  +Y  
Sbjct: 561 FDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTI 619

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LIN   ++ +  +A  L+SKME+    PD IT+ +I+    ++     +E +   MI +G
Sbjct: 620 LINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679

Query: 446 L 446
           L
Sbjct: 680 L 680



 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 248/484 (51%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C +  I  A  F   +  +G   D  TY TLIN   + G ++ A  L+  M    
Sbjct: 131 IINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSS 190

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +  Y++LI+GLCK G    A  +  ++ + G+  D  TYN+L+   C      E  
Sbjct: 191 VQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVT 250

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M R  V PD  +F+ LI    + G++  A      M   G  PD V Y  ++ GY
Sbjct: 251 QLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGY 310

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V EA ++ + M+++G   DV+ YN +++G C+ KM+ EA  LF E+  + + P  
Sbjct: 311 CSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTI 370

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ +LI G C  G ++    L D M   +  PD+VTYN LID  CK G + +A  +   
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + PN ++Y  +++GYC   +V  A  ++  MV  G++P +++ N +I GYC++  
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     +M  + + PD  SYN+LI+G      +     L+ +M + G  PDVITYN+
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L  FC+  +  D  + L+R I +G+ PD  T   +++       LK A      +L  G
Sbjct: 551 LLDAFCKT-QPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609

Query: 481 FVPD 484
             P+
Sbjct: 610 CSPN 613



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 216/446 (48%), Gaps = 70/446 (15%)

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
           ++CR  N+ +A   F  M R    P    F  L+G   R G    A+  F +++S G+ P
Sbjct: 29  KNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISP 88

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
               +TI+IN Y        A  +   +L+ G   ++VT+NTI+NG C   M+ +A D  
Sbjct: 89  SIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFC 148

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP--------------- 273
             +L +G   D +T+ TLI+G  K+G +  AL+L   M + S++P               
Sbjct: 149 QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKD 208

Query: 274 --------------------DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
                               D VTYN+LIDG C VG  ++  +L   M+   + P+  ++
Sbjct: 209 GFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
            ILI+  C  G + EA  +   M  +G KP +V+ N +++GYC   +  +A E  ++MV 
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV--------------------- 412
            G++PD ++YN LI+G+ + + +D+A  L  ++ N+ LV                     
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388

Query: 413 --------------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
                         PDV+TYN+++   C++GR+ ++  +L  M++KG+ P+  TY  +++
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMD 448

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G+  +NN+  A    + M++ G  PD
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKSGLEPD 474



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 126/238 (52%)

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           H +C+  N++ A+  F+ M +    P    ++ L+    ++G    A  L+  + S+ IS
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+  ++ ILIN Y    H   AF L   ++  G +P LV+ NTII G+C +G   KA +F
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
              ++++G   D  +Y TLING  +   +  A  L+ +ME   + P+++ Y+ ++ G C+
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            G + D+  +  ++ E+G+  D  TY +LI+G  S    +E  +   +M++    PDD
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD 265



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 1/167 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   +I   +  L EM   G  PD +TYN L++A+C+    ++A  L   +  +G
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EG 574

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T +++++ LCK  +   A++ L  +L  G SP+  TY  L+   C+  +  EA 
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
            +  +M      PD ++F  +IG+  +  + D+A     EM + GLV
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 155/486 (31%), Positives = 265/486 (54%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +VNALCK+  + +A+MF C++ + G   DT    +L+ A CR   L EAF++   MS + 
Sbjct: 200 VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEE 259

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             +P   TY+ LI+GLC+ GR + A ++  EM++ G  P T TY  L+   C      +A
Sbjct: 260 NCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 319

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  EM+ +   P++ +++ LI    R G+++ A   FR+M   GL P  + +  +ING
Sbjct: 320 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 379

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G+V+ A ++   M +  C  ++ TYN ++ GLCR     +A  L   +++ G+ PD
Sbjct: 380 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 439

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+ G CK+G +N A N+F+ M    ++PD  T+  LIDG CK+G +E+AN +  
Sbjct: 440 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 499

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + IS + +++  LI+G+C +G   +   L+  MV      T  + N  +    +  
Sbjct: 500 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 559

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             ++A+  L KM+  G+ P  +++  LI G  R      +  ++ +M+  G  P+V TY 
Sbjct: 560 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 619

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +I+ G C  GR+ ++E IL+ M   G++P+  TY  L+  HV    L  AF+    M++ 
Sbjct: 620 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 679

Query: 480 GFVPDD 485
           G  P+ 
Sbjct: 680 GCQPNS 685



 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 251/494 (50%), Gaps = 39/494 (7%)

Query: 27  YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE 86
           YP    Y+TL+    +      AF +   M  +G   G   Y +++N LCK G    A+ 
Sbjct: 159 YP---CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEM 215

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR-RGVAPDIVSFSTLIGIF 145
              ++L++G   DT    +L++ +CR++++ EA  +F +MS+     P+ V++S LI   
Sbjct: 216 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGL 275

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+L+ A    +EM   G  P    YT++I   C  G   +A+KM DEM  K CV +V
Sbjct: 276 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 335

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TY  +++ LCR   + EA+ +F +ML+ G+ P   TF  LI+G+CK+G +  A  L  +
Sbjct: 336 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 395

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M + + KP+I TYN L++G C+V +  KA  L   ++   + P+ ++Y IL++G+C  G 
Sbjct: 396 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 455

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  AF ++  M   G++P   +   +I G C+ G   +A+  L  MV +G+  D +++  
Sbjct: 456 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 515

Query: 386 LINGFVRE----------ENM-------------------------DKAFALVSKMENQG 410
           LI+G  +           ENM                         ++A A++ KM   G
Sbjct: 516 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 575

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           LVP V+T+ +++ G CR G    S  +L RM + G +P+  TYT +ING  +   ++EA 
Sbjct: 576 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 635

Query: 471 RFHDEMLQRGFVPD 484
                M   G  P+
Sbjct: 636 TILFSMSSFGVSPN 649



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 154/506 (30%), Positives = 249/506 (49%), Gaps = 21/506 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C     D A   L EM  K   P+  TY  LI+  CREG +EEA  +   M   G
Sbjct: 306 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 365

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG+ T+N+LING CK+G    A ++L  M +    P+  TYN L+   CR     +A 
Sbjct: 366 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF 425

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   +   G+ PD V+++ L+  F + GQL+ A   F  M SAGL PD   +T +I+G 
Sbjct: 426 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 485

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A  +   M++KG  +D VT+  +++G C+     +   LF  M+E       
Sbjct: 486 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 545

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF   +    KD  +N+A  +   M +  + P +VT+  LI+G C+ GE   + K+   
Sbjct: 546 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 605

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     SPN  +Y I+ING C+ G V EA  + + M   G+ P   +   ++K + ++G 
Sbjct: 606 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 665

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK--MENQGL------- 411
             +A + +S MV  G  P+S  Y+ L++GFV       A AL S   ++ + L       
Sbjct: 666 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 725

Query: 412 -----------VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
                      VP    YN ++ G C++GR+ +++ +   M++ GL PD++  +++I  +
Sbjct: 726 NCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHY 784

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDDA 486
                      F   +L   FVP  A
Sbjct: 785 CKTCKYDNCLEFMKLVLDNKFVPSFA 810



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 210/426 (49%), Gaps = 21/426 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  K   A + L  +   G+ PD VTYN L++ +C+EG L  AF + NSM+  G
Sbjct: 411 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 470

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P  FT+ +LI+GLCK GR ++A  +L  M++ G+S D  T+  L+   C+     +  
Sbjct: 471 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 530

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M          +F+  +    ++ +L+ A     +M   GLVP  V +TI+I G+
Sbjct: 531 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 590

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G    +LKM + M + GC  +V TY  I+NGLC    + EA+ +   M   GV P+ 
Sbjct: 591 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 650

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA- 299
           +T+  L+  H K G +++A  +   M +   +P+   Y+ L+ GF        A  L + 
Sbjct: 651 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSST 710

Query: 300 -DMISRKIS------------------PNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
            D+ +R +S                  P    Y  L+ G C  G + EA +L  +MV  G
Sbjct: 711 GDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHG 770

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           + P   + ++II+ YC++       EF+  ++     P   SY  +I+G   E  + +A 
Sbjct: 771 LFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQ 829

Query: 401 ALVSKM 406
            LVS +
Sbjct: 830 KLVSDL 835



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 186/362 (51%), Gaps = 1/362 (0%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M+  G       +STL+   ++      A + +R M + G V   + Y  ++N  C+NGF
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 209

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-ERGVFPDFYTFT 244
           V  A     ++L  G  +D     +++   CR   L EA  +F +M  E    P+  T++
Sbjct: 210 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYS 269

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LIHG C+ G + +A  L   M +K  +P   TY  LI   C +G  +KA K+  +M ++
Sbjct: 270 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 329

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              PN  +Y ILI+  C  G + EA  ++ +M+  G+ P +++ N +I GYC+ G    A
Sbjct: 330 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 389

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            + LS M      P+  +YN L+ G  R     KAF L+ ++ + GL+PD +TYN+++ G
Sbjct: 390 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 449

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           FC++G+++ +  I   M   GL PD  T+T LI+G      L++A      M+++G   D
Sbjct: 450 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 509

Query: 485 DA 486
           + 
Sbjct: 510 EV 511



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCK+ +I  A     +M + G++PD    +++I  YC+    +   + M  +    
Sbjct: 746 LVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNK 804

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
             P   +Y  +I+GL  +GR   A++++ ++++
Sbjct: 805 FVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVR 837



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 4/111 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E+++ GV P    YN L+   C+EG + EA QL   M   GL P     +S+I   CK  
Sbjct: 731 EIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTC 788

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEAEEIFCEMSRR 129
           + D   E +  +L     P  A+Y   ++   R E  + EA+++  ++ R 
Sbjct: 789 KYDNCLEFMKLVLDNKFVPSFASY-CWVIHGLRNEGRVQEAQKLVSDLVRH 838


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 160/486 (32%), Positives = 265/486 (54%), Gaps = 3/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A CK   +   KM L EME K   P+  TYN  I   C+ G ++EA ++   M  KG
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG 306

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TY  L++G CK+ R   AK + + M   GL+P+  TY  L+    ++ N+ EA 
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM  RG+  ++V+++ +IG  ++ G++ +A+  F EM  AG+ PD   Y ++I+GY
Sbjct: 367 RIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGY 426

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++  + +A ++  EM  +       TY+ +++GLC +  L +A+++ ++M+  GV P+ 
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + TLI  + ++     A+ L  IM    + PD+  YN LI G C+  ++E+A  L  D
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I PN  +YG  IN Y   G +  A R + +M+  GI P  V    +IKG+C  G+
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A      M+ +G+ PD  +Y+ +I+   +     +A  +  K    G+VPDV  YN 
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN--GHVSQNNLKEAFRFHDEMLQ 478
           +++GFC++G +  +  +   M+  G+NP+   Y TLIN  G+    NL EAF+  DEM+ 
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS 726

Query: 479 RGFVPD 484
           +G  PD
Sbjct: 727 KGISPD 732



 Score =  298 bits (762), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 159/490 (32%), Positives = 277/490 (56%), Gaps = 4/490 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K H +  A   L EM+ + + P   TY+ LI+  C    L++A ++++ M   G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP VF Y +LI    ++ R + A E+L  M+  G+ PD   YN L++  CR + + EA+
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  +G+ P+  ++   I ++S++G++  A  YF++M S+G+VP+NV+YTI+I G+
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  +EAL     MLEKG + D+  Y+ I++ L +     EA  +F + L+ GV PD 
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID--GFCKVGEMEKANKLW 298
           + + +LI G CK+G++ KA  L+D M    I P+IV YNTLI+  G+CK G + +A KL+
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLF 721

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +MIS+ ISP+   Y ILI+G    G++ +A  L++E   K +  +L + N++I  +C+ 
Sbjct: 722 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKH 780

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A E    MV + + P+ ++Y  LI+ + + E M++A  L   ME + ++P+ +TY
Sbjct: 781 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 840

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             +L  + + G       +   M  +G+  D   Y  + + +  +    EA +  ++ L 
Sbjct: 841 TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 900

Query: 479 RGF-VPDDAF 487
            G  + DD F
Sbjct: 901 EGIKLEDDVF 910



 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 156/485 (32%), Positives = 261/485 (53%), Gaps = 3/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  ++ + + A   L  M   GV PD   YN LI   CR   +EEA  L+  M  KG
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TY + IN   K G    A+    +ML  G+ P+   Y  L+   C   N  EA 
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M  +G+ PDI ++S +I   S+NG+   A+  F +    G+VPD  LY  +I+G+
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN--GLCRAKMLTEADDLFNEMLERGVFP 238
           C+ G + +A ++ DEML  G   ++V YNT++N  G C++  LTEA  LF+EM+ +G+ P
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISP 731

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D Y +  LI G  K+GN+ KAL+LF    QKS+   +  +N+LID FCK G++ +A +L+
Sbjct: 732 DGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELF 790

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            DM+ +K++PN ++Y ILI+ Y     + EA +L+ +M  + I P  ++  +++  Y + 
Sbjct: 791 DDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQI 850

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  K       M + G+  D+I+Y  + + + +E    +A  L++K   +G+  +   +
Sbjct: 851 GNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVF 910

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++   C++ ++     +L  M ++ L+    T  TL+ G     N  EA +    M +
Sbjct: 911 DALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQR 970

Query: 479 RGFVP 483
            G+VP
Sbjct: 971 LGWVP 975



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 214/408 (52%), Gaps = 1/408 (0%)

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           G  + A  V    +  G  P     N L+ +  +   M    +++  M    + PD+ ++
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTY 245

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + +I    + G + +  M   EM+     P+   Y   I G C+ G V EAL+++  M+E
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMME 304

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
           KG   D  TY  +++G C+ K   EA  +F  M   G+ P+ +T+T LI G  K+GN+ +
Sbjct: 305 KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEE 364

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           AL + D M  + +K ++VTYN +I G  K GEM KA  L+ +M+   I P+  +Y +LI+
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLID 424

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           GY     + +A  L  EM  + + P+  + + +I G C S D  KA+E L +M+  GV P
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +   Y TLI  +V+E   + A  L+  M   G++PD+  YN ++ G CR  ++ +++++L
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             M EKG+ P+  TY   IN +     ++ A R+  +ML  G VP++ 
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 189/368 (51%), Gaps = 38/368 (10%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           LD  +  +RE   + L     ++ I I+ +   GF+ EA  +    + +G    ++  N 
Sbjct: 157 LDSLVRCYREFGGSNLT----VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNN 212

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN--------------- 255
           ++  L +A M+     ++  M+E  + PD YT+T +I  HCK G+               
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC 272

Query: 256 -------------------MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
                              +++AL +  +M +K + PD  TY  L+DGFCK    ++A  
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           ++  M S  ++PN  +Y  LI+G+   G++ EA R+  EM+ +G+K  +V+ N +I G  
Sbjct: 333 IFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           ++G+ +KA    ++M+  G++PD+ +YN LI+G+++  +M KA  L+++M+ + L P   
Sbjct: 393 KAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY+V+++G C    +  +  +L +MI  G+ P+   Y TLI  +V ++  + A      M
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512

Query: 477 LQRGFVPD 484
           +  G +PD
Sbjct: 513 IANGVLPD 520


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 165/506 (32%), Positives = 279/506 (55%), Gaps = 29/506 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K++ A+  L +M+  G++P+  T+N L++ YC+ G+L+EA ++++ M+   
Sbjct: 89  ILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNN 148

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS-EA 119
           + P V TY +LI GLCK G+ D A  + DEM  + L P   TYN +L+  C + + S + 
Sbjct: 149 VLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYN-MLINGCFECSSSLKG 207

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+  EM  +GV P+ V+++ ++  + + G++D A    R+M+ +G  PD V +  + NG
Sbjct: 208 FELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNG 267

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G + EA +M DEM  KG  M+ VT NTIL+ LC  + L +A  L +   +RG F D
Sbjct: 268 YCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVD 327

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++ TLI G+ K G        +D M +K I P I+TY T+I G C+ G+ +++     
Sbjct: 328 EVSYGTLIMGYFKVGKSXX----WDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCN 383

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +++   + P+  +Y  +I GYC  G V +AF    +MV K  KP L +CN +++G C  G
Sbjct: 384 ELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEG 443

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              KA +     +S+G   D++++NT+I+G   E   ++AF L+++ME + L PD  T+N
Sbjct: 444 MLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHN 503

Query: 420 VILTGFCRQGRMHDSELILWRMIEKG-----------------------LNPDRSTYTTL 456
            IL+     GRM ++E  +  ++E+G                        +P+   ++  
Sbjct: 504 AILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQ 563

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFV 482
           IN   +Q   K+A     E  Q+G +
Sbjct: 564 INELCTQGKYKDAMHMIQESTQKGII 589



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 155/488 (31%), Positives = 255/488 (52%), Gaps = 6/488 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C ++K+  A   + +M+    +PD V+YNT+++  C++G L EA  L+  M   G
Sbjct: 54  LICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 113

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   T+N L++G CK G    A EV+D M +  + PD  TY TL+   C+   + EA 
Sbjct: 114 LFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAF 173

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  EM    + P +V+++ LI G F  +  L +      EM+  G+ P+ V Y +++  
Sbjct: 174 RLRDEMENLKLLPHVVTYNMLINGCFECSSSL-KGFELIDEMEGKGVKPNAVTYNVVVKW 232

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y + G +  A     +M E G   D VT+NT+ NG C+A  L+EA  + +EM  +G+  +
Sbjct: 233 YVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMN 292

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T  T++H  C +  ++ A  L    +++    D V+Y TLI G+ KVG+    +  W 
Sbjct: 293 SVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWD 348

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  ++I P+ I+YG +I G C  G   ++     E++  G+ P   + NTII GYCR G
Sbjct: 349 EMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREG 408

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              KA  F +KMV +   PD  + N L+ G   E  +DKA  L     ++G   D +T+N
Sbjct: 409 QVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFN 468

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            I++G C +GR  ++  +L  M EK L PD  T+  +++       +KEA  F   ++++
Sbjct: 469 TIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQ 528

Query: 480 GFVPDDAF 487
           G + D   
Sbjct: 529 GKLQDQTI 536



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 158/472 (33%), Positives = 258/472 (54%), Gaps = 6/472 (1%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           +K    ++ + GV  +T T+N LI   C E  L EA  L+  M      P   +YN++++
Sbjct: 32  SKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILD 91

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
            LCKKG+ + A+++L +M   GL P+  T+N L+   C+   + EA E+   M+R  V P
Sbjct: 92  VLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLP 151

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D+ +++TLIG   ++G++D A     EM++  L+P  V Y ++ING       L+  ++ 
Sbjct: 152 DVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELI 211

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           DEM  KG   + VTYN ++    +   +  A +   +M E G  PD  TF TL +G+CK 
Sbjct: 212 DEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKA 271

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G +++A  + D M++K +K + VT NT++   C   +++ A KL +    R    + +SY
Sbjct: 272 GRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSY 331

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
           G LI GY  +G        W EM  K I P++++  T+I G CRSG   ++ +  ++++ 
Sbjct: 332 GTLIMGYFKVGKSXX----WDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLE 387

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+ PD  +YNT+I G+ RE  +DKAF   +KM  +   PD+ T N+++ G C +G M D
Sbjct: 388 SGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEG-MLD 446

Query: 434 SELILWRM-IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             L L++  I KG   D  T+ T+I+G   +   +EAF    EM ++   PD
Sbjct: 447 KALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPD 498



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/427 (32%), Positives = 232/427 (54%), Gaps = 7/427 (1%)

Query: 61  LKPGVFTYNSLINGLCK---KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           LKP + T N+LI  L +   K     +K +  +++++G+  +T T+N L+   C +  +S
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA  +  +M      PD VS++T++ +  + G+L+ A     +MK+ GL P+   + I++
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +GYC+ G++ EA ++ D M     + DV TY T++ GLC+   + EA  L +EM    + 
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P   T+  LI+G  +  +  K   L D M  K +KP+ VTYN ++  + K G+M+ A   
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M     SP+ +++  L NGYC  G ++EAFR+  EM  KG+K   V+ NTI+   C 
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCG 305

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
                 A + LS     G   D +SY TLI G+ +   + K+     +M+ + ++P +IT
Sbjct: 306 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK---VGKSXXW-DEMKEKEIIPSIIT 361

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y  ++ G CR G+   S      ++E GL PD++TY T+I G+  +  + +AF F ++M+
Sbjct: 362 YGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMV 421

Query: 478 QRGFVPD 484
           ++ F PD
Sbjct: 422 KKSFKPD 428



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 195/363 (53%), Gaps = 11/363 (3%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSR-----NGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           M R  + P++++ +TLI    R     +  L +A+  F ++   G+  +   + I+I G 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAI--FSDVIKLGVEVNTNTFNILICGC 58

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA+ +  +M    C  D V+YNTIL+ LC+   L EA DL  +M   G+FP+ 
Sbjct: 59  CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  L+ G+CK G + +A  + DIM + ++ PD+ TY TLI G CK G++++A +L  +
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDE 178

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M + K+ P+ ++Y +LING        + F L  EM GKG+KP  V+ N ++K Y + G 
Sbjct: 179 MENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGK 238

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   L KM   G  PD +++NTL NG+ +   + +AF ++ +M  +GL  + +T N 
Sbjct: 239 MDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 298

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL   C + ++ D+  +L    ++G   D  +Y TLI G+             DEM ++ 
Sbjct: 299 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKE 354

Query: 481 FVP 483
            +P
Sbjct: 355 IIP 357



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 157/292 (53%)

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           ++++ G  ++  T+N ++ G C    L+EA  L  +M     FPD  ++ T++   CK G
Sbjct: 38  DVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKG 97

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            +N+A +L   M    + P+  T+N L+ G+CK+G +++A ++   M    + P+  +Y 
Sbjct: 98  KLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYT 157

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            LI G C  G + EAFRL  EM    + P +V+ N +I G      + K  E + +M  +
Sbjct: 158 TLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGK 217

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           GV P++++YN ++  +V+E  MD A   + KME  G  PD +T+N +  G+C+ GR+ ++
Sbjct: 218 GVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEA 277

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             ++  M  KGL  +  T  T+++    +  L +A++      +RG+  D+ 
Sbjct: 278 FRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEV 329


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 263/484 (54%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K+ +I +A   L EME+  V P+ V Y+ LI+  C++GF+ +A  L + +  +G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TYNSLI+G C  GR     ++L +M++  + PD  T+N L+   C++  + EA+
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   MS+RG  PDIV+++ L+  +     +  A   F  M   GL PD + Y ++I+GY
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA+ +  E+  K  V  + +YN++++GLC +  ++    L +EM      PD 
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   CK+G + +AL +  +M +K +KP+IVTYN ++DG+C    +  A  ++  
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P+ ++Y +LINGYC    V EA  L+ EM  K + P + S N++I G C  G 
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E L +M   G  PD I+YN L++ F + +  DKA +L  ++  +G+ PD  T + 
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHA 584

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+   C+  ++  +E  L  ++  G +P+  TYT LIN      +  EA     +M    
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644

Query: 481 FVPD 484
             PD
Sbjct: 645 RPPD 648



 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 153/481 (31%), Positives = 261/481 (54%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C+   +D A      M +    P T  ++ L+ A  R G    A  L   +  KG+ P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            T+  LIN    +     A  +L  +L+ G  P+  T+NT++   C    + +A +    
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           +  +G   D  ++ TLI   S+NGQ+  AL   +EM+ + + P+ V+Y+ +I+G C++GF
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V +AL +  ++ E+G ++D VTYN++++G C      E   L  +M+   V PD YTF  
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI   CK+G + +A  +  +M+++  KPDIVTYN L++G+C    + +A +L+  M+ R 
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           + P+ ++Y +LI+GYC    V EA  L+ E+  K + PT+ S N++I G C SG  S   
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           + L +M      PD ++YN LI+   +E  + +A  ++  M  +G+ P+++TYN ++ G+
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C +  ++ ++ I  RM++ GL PD   Y  LING+     + EA     EM  +  +PD 
Sbjct: 451 CLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI 510

Query: 486 A 486
           A
Sbjct: 511 A 511



 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 152/481 (31%), Positives = 263/481 (54%), Gaps = 3/481 (0%)

Query: 6   CKDHKIDSAKMF--LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           C  H+  +A  F  L  + + G  P+ VT+NT+IN +C  G + +A     ++  +G   
Sbjct: 99  CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
             FTY +LINGL K G+   A  +L EM +  + P+   Y+ L+   C+   +S+A  + 
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            ++  RG+  D V++++LI      G+         +M    + PD+  + I+I+  C+ 
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G +LEA  +   M ++G   D+VTYN ++ G C  + + EA +LFN M++RG+ PD   +
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             LI G+CK   +++A+ LF  +  K++ P I +YN+LIDG C  G +    KL  +M  
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
               P+ ++Y ILI+  C  G + EA  +   M+ KG+KP +V+ N ++ GYC   + + 
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A +  ++MV  G++PD ++YN LING+ + E +D+A  L  +M ++ L+PD+ +YN ++ 
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G C  GR+   + +L  M + G +PD  TY  L++         +A     ++++ G  P
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWP 577

Query: 484 D 484
           D
Sbjct: 578 D 578



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 257/481 (53%), Gaps = 36/481 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCKD  +  A     ++ ++G+  D VTYN+LI+  C  G  +E  QL+  M  + 
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T+N LI+ LCK+GR   A+ VL  M + G  PD  TYN L+   C +EN+ EA 
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP------------ 168
           E+F  M +RG+ PD+++++ LI  + +   +D A++ F+E+ +  LVP            
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380

Query: 169 -----------------------DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                                  D V Y I+I+  C+ G +LEAL +   M++KG   ++
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNI 440

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYN +++G C    +  A D+FN M++ G+ PD   +  LI+G+CK   +++A+ LF  
Sbjct: 441 VTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE 500

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K++ PDI +YN+LIDG C +G +    +L  +M     SP+ I+Y IL++ +C    
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQP 560

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +A  L+ ++V +GI P   + + I+   C+      A++ L  ++  G  P+  +Y  
Sbjct: 561 FDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTI 619

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LIN   ++ +  +A  L+SKME+    PD IT+ +I+    ++     +E +   MI +G
Sbjct: 620 LINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679

Query: 446 L 446
           L
Sbjct: 680 L 680



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 248/484 (51%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C +  I  A  F   +  +G   D  TY TLIN   + G ++ A  L+  M    
Sbjct: 131 IINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSS 190

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +  Y++LI+GLCK G    A  +  ++ + G+  D  TYN+L+   C      E  
Sbjct: 191 VQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVT 250

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M R  V PD  +F+ LI    + G++  A      M   G  PD V Y  ++ GY
Sbjct: 251 QLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGY 310

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V EA ++ + M+++G   DV+ YN +++G C+ KM+ EA  LF E+  + + P  
Sbjct: 311 CSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTI 370

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ +LI G C  G ++    L D M   +  PD+VTYN LID  CK G + +A  +   
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + PN ++Y  +++GYC   +V  A  ++  MV  G++P +++ N +I GYC++  
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     +M  + + PD  SYN+LI+G      +     L+ +M + G  PDVITYN+
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L  FC+  +  D  + L+R I +G+ PD  T   +++       LK A      +L  G
Sbjct: 551 LLDAFCKT-QPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609

Query: 481 FVPD 484
             P+
Sbjct: 610 CSPN 613



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 216/446 (48%), Gaps = 70/446 (15%)

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
           ++CR  N+ +A   F  M R    P    F  L+G   R G    A+  F +++S G+ P
Sbjct: 29  KNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISP 88

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
               +TI+IN Y        A  +   +L+ G   ++VT+NTI+NG C   M+ +A D  
Sbjct: 89  SIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFC 148

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP--------------- 273
             +L +G   D +T+ TLI+G  K+G +  AL+L   M + S++P               
Sbjct: 149 QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKD 208

Query: 274 --------------------DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
                               D VTYN+LIDG C VG  ++  +L   M+   + P+  ++
Sbjct: 209 GFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
            ILI+  C  G + EA  +   M  +G KP +V+ N +++GYC   +  +A E  ++MV 
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV--------------------- 412
            G++PD ++YN LI+G+ + + +D+A  L  ++ N+ LV                     
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388

Query: 413 --------------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
                         PDV+TYN+++   C++GR+ ++  +L  M++KG+ P+  TY  +++
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMD 448

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G+  +NN+  A    + M++ G  PD
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKSGLEPD 474



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 126/238 (52%)

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           H +C+  N++ A+  F+ M +    P    ++ L+    ++G    A  L+  + S+ IS
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+  ++ ILIN Y    H   AF L   ++  G +P LV+ NTII G+C +G   KA +F
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
              ++++G   D  +Y TLING  +   +  A  L+ +ME   + P+++ Y+ ++ G C+
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            G + D+  +  ++ E+G+  D  TY +LI+G  S    +E  +   +M++    PDD
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD 265



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 1/167 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   +I   +  L EM   G  PD +TYN L++A+C+    ++A  L   +  +G
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EG 574

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T +++++ LCK  +   A++ L  +L  G SP+  TY  L+   C+  +  EA 
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
            +  +M      PD ++F  +IG+  +  + D+A     EM + GLV
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  301 bits (772), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 159/498 (31%), Positives = 272/498 (54%), Gaps = 39/498 (7%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC D +  D+  + L  M + G  P+  +YN L+   C E   +EA +L++ M+  
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187

Query: 58  -GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            G G  P V +Y ++ING  K+G  D+A     EML  G+ PD  TYN+++   C+ + M
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A E+   M + GV PD +++++++  +  +GQ   A+ + ++M+S G+ PD V Y+++
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++  C+NG  +EA K+ D M ++G   ++ TY T+L G      L E   L + M+  G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY------------------ 278
            PD Y F+ LI  +   G +++A+ +F  M Q+ + P+ VTY                  
Sbjct: 368 HPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 279 -----------------NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
                            N+LI G C   + E+A +L  +M+ R I  N I +  +I+ +C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G V E+ +L+  MV  G+KP +++ NT+I GYC +G   +A + LS MVS G+ P+++
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y+TLING+ +   M+ A  L  +ME+ G+ PD+ITYN+IL G  +  R   ++ +  R+
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607

Query: 442 IEKGLNPDRSTYTTLING 459
            E G   + STY  +++G
Sbjct: 608 TESGTQIELSTYNIILHG 625



 Score =  298 bits (762), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 268/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV PD +TYN++++ YC  G  +EA   +  M   G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY+ L++ LCK GRC  A+++ D M + GL P+  TY TLL     K  + E  
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ PD   FS LI  ++  G++D+A++ F +M+  GL P+ V Y  +I   
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A+   ++M+++G     + YN++++GLC       A++L  EML+RG+  + 
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I  HCK+G + ++  LF++M +  +KP+++TYNTLI+G+C  G+M++A KL + 
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + PN ++Y  LINGYC +  + +A  L+ EM   G+ P +++ N I++G  ++  
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E   ++   G   +  +YN +++G  + +  D A  +   +    L  +  T+N+
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  +++ +       GL P+  TY  +    + Q  L+E  +    M   G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716

Query: 481 FVPD 484
              D
Sbjct: 717 CTVD 720



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 252/498 (50%), Gaps = 39/498 (7%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V PD  TY  LI   CR G L+  F  + ++  KG +     +  L+ GLC   R   A 
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR---GVAPDIVSFSTL 141
           + VL  M ++G  P+  +YN LL   C +    EA E+   M+     G  PD+VS++T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F + G  D+A   + EM   G++PD V Y  II   C+   + +A+++ + M++ G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + D +TYN+IL+G C +    EA     +M   GV PD  T++ L+   CK+G   +A  
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +FD MT++ +KP+I TY TL+ G+   G + + + L   M+   I P++  + ILI  Y 
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
           + G V +A  ++ +M  +G+ P  V+   +I   C+SG    A  +  +M+ EG+ P +I
Sbjct: 383 NQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLV----------------------------- 412
            YN+LI+G       ++A  L+ +M ++G+                              
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 413 ------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
                 P+VITYN ++ G+C  G+M ++  +L  M+  GL P+  TY+TLING+   + +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 467 KEAFRFHDEMLQRGFVPD 484
           ++A     EM   G  PD
Sbjct: 563 EDALVLFKEMESSGVSPD 580



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 205/396 (51%), Gaps = 4/396 (1%)

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRA 154
           ++PD  TY  L+   CR   +         + ++G   D ++F+ L+ G+ +     D  
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
            +  R M   G +P+   Y I++ G C   R+   LE L M  +    G   DVV+Y T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           +NG  +     +A   ++EML+RG+ PD  T+ ++I   CK   M+KA+ + + M +  +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            PD +TYN+++ G+C  G+ ++A      M S  + P+ ++Y +L++  C  G   EA +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           ++  M  +G+KP + +  T+++GY   G   +    L  MV  G+ PD   ++ LI  + 
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
            +  +D+A  + SKM  QGL P+ +TY  ++   C+ GR+ D+ L   +MI++GL+P   
Sbjct: 383 NQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            Y +LI+G  + N  + A     EML RG   +  F
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 203/374 (54%), Gaps = 1/374 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A     K+D A +   +M Q+G+ P+ VTY  +I   C+ G +E+A      M  +G
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG   YNSLI+GLC   + +RA+E++ EML  G+  +T  +N+++   C++  + E+E
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV P++++++TLI  +   G++D A+     M S GL P+ V Y+ +INGY
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM   G   D++TYN IL GL + +    A +L+  + E G   + 
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   + AL +F  +    +K +  T+N +ID   KVG  ++A  L+  
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
             S  + PNY +Y ++       G + E  +L+  M   G        N I++   + G+
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 361 ASKADEFLSKMVSE 374
            ++A  +LS M+ E
Sbjct: 737 ITRAGTYLS-MIDE 749



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 39/219 (17%)

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK---------------------- 342
           +++P+  +YGILI   C  G +   F     ++ KG +                      
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 343 --------------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSE---GVDPDSISYNT 385
                         P + S N ++KG C    + +A E L  M  +   G  PD +SY T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +INGF +E + DKA++   +M ++G++PDV+TYN I+   C+   M  +  +L  M++ G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + PD  TY ++++G+ S    KEA  F  +M   G  PD
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 169/485 (34%), Positives = 272/485 (56%), Gaps = 5/485 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C  ++IDSA   L +M + G  P++V Y TLI++  +   + EA QL+  M   G
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+N +I GLCK  R + A ++++ ML  G +PD  TY  L+   C+   +  A+
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
           ++F  + +    P+IV F+TLI  F  +G+LD A     +M  S G+VPD   Y  +I G
Sbjct: 343 DLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y + G V  AL++  +M  KGC  +V +Y  +++G C+   + EA ++ NEM   G+ P+
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F  LI   CK+  + +A+ +F  M +K  KPD+ T+N+LI G C+V E++ A  L  
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DMIS  +  N ++Y  LIN +   G + EA +L  EMV +G     ++ N++IKG CR+G
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  KA     KM+ +G  P +IS N LING  R   +++A     +M  +G  PD++T+N
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G CR GR+ D   +  ++  +G+ PD  T+ TL++       + +A    DE ++ 
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698

Query: 480 GFVPD 484
           GFVP+
Sbjct: 699 GFVPN 703



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 251/522 (48%), Gaps = 43/522 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++  L  + +  +    L +M+ +G+      + +++  Y + GF  +  +LM  M    
Sbjct: 117 LIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVY 176

Query: 60  GLKPGVFTYNSLINGLCKKGRCDR-AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
             +P   +YN ++  L   G C + A  V  +ML   + P   T+  ++   C    +  
Sbjct: 177 SCEPTFKSYNVVLEILVS-GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  +M++ G  P+ V + TLI   S+  +++ AL    EM   G VPD   +  +I 
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C+   + EA KM + ML +G   D +TY  ++NGLC+   +  A DLF  + +    P
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 351

Query: 239 DFYTFTTLIHGHCKDGNMNKALN-LFDIMTQKSIKPDIVTYNTLI--------------- 282
           +   F TLIHG    G ++ A   L D++T   I PD+ TYN+LI               
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411

Query: 283 --------------------DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
                               DGFCK+G++++A  +  +M +  + PN + +  LI+ +C 
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
              + EA  ++ EM  KG KP + + N++I G C   +   A   L  M+SEGV  ++++
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNTLIN F+R   + +A  LV++M  QG   D ITYN ++ G CR G +  +  +  +M+
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             G  P   +   LING      ++EA  F  EM+ RG  PD
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 218/399 (54%), Gaps = 5/399 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++N LCK  ++D+AK     + +    P+ V +NTLI+ +   G L++A  +++ M +  
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P V TYNSLI G  K+G    A EVL +M   G  P+  +Y  L+   C+   + EA
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EMS  G+ P+ V F+ LI  F +  ++  A+  FREM   G  PD   +  +I+G
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C    +  AL +  +M+ +G V + VTYNT++N   R   + EA  L NEM+ +G   D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ +LI G C+ G ++KA +LF+ M +    P  ++ N LI+G C+ G +E+A +   
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+ R  +P+ +++  LING C  G + +   ++ ++  +GI P  V+ NT++   C+ G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
               A   L + + +G  P+  +++ L+   + +E +D+
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 192/411 (46%), Gaps = 48/411 (11%)

Query: 115 NMSEAEEIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQ---LDRALMYFREMKSAGLVPDN 170
           N+S + E+F    S+ G       +  LIG    NG+   +DR L+   +MK  G+V   
Sbjct: 90  NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI---QMKDEGIVFKE 146

Query: 171 VLYTIIINGYCRNGFVLEA----LKMRD-------------------------------- 194
            L+  I+  Y + GF  +     L+MR+                                
Sbjct: 147 SLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY 206

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           +ML +     + T+  ++   C    +  A  L  +M + G  P+   + TLIH   K  
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            +N+AL L + M      PD  T+N +I G CK   + +A K+   M+ R  +P+ I+YG
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-S 373
            L+NG C +G V  A  L+Y +     KP +V  NT+I G+   G    A   LS MV S
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+ PD  +YN+LI G+ +E  +  A  ++  M N+G  P+V +Y +++ GFC+ G++ +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  +L  M   GL P+   +  LI+    ++ + EA     EM ++G  PD
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  ++D A+    +M + G  P  ++ N LIN  CR G +EEA +    M  +G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + T+NSLINGLC+ GR +    +  ++   G+ PDT T+NTL+   C+   + +A 
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
            +  E    G  P+  ++S L+        LDR   Y
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 156/503 (31%), Positives = 271/503 (53%), Gaps = 19/503 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C  +++  A   L ++ + G  PDT T+ TLI   C EG + EA  L + M G+G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G    A  +L  M+Q    P+   YNT++   C+   ++EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G++PDI ++++LI       +         EM  + ++PD V +  +++  
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  + D+M+++G   +VVTY  +++G C    + EA  +F+ M+ +G  P+ 
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 241 YTFTTLIHGHCKDG-------------------NMNKALNLFDIMTQKSIKPDIVTYNTL 281
            ++ TLI+G+CK                     NM++A+ +FD M  K   P++++YNTL
Sbjct: 342 ISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTL 401

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           I+G+CK+  ++KA  L+ +M  +++ P+ ++Y  LI+G C +  + +A  L++EMV    
Sbjct: 402 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 461

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            P LV+   ++   C++   ++A   L  +    +DPD    N  I+G  R   ++ A  
Sbjct: 462 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 521

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           L S + ++GL PDV TY++++ G CR+G + ++  +   M E G   +   Y T+  G +
Sbjct: 522 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 581

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
             N    A +   EM+ RGF  D
Sbjct: 582 RNNETSRAIQLLQEMVARGFSAD 604



 Score =  280 bits (717), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 157/499 (31%), Positives = 264/499 (52%), Gaps = 23/499 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  +C + KI  A     +M  +G  PD VTY TLIN  C+ G    A +L+ SM  K 
Sbjct: 137 LIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN 196

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P VF YN++I+ LCK  +   A  +  EM+  G+SPD  TYN+L+   C         
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 256

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM    + PD+VSF+T++    + G++  A     +M   G+ P+ V YT +++G+
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM-------------------L 221
           C    + EA+K+ D M+ KGC+ +V++YNT++NG C+ +                    +
Sbjct: 317 CLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNM 376

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
            EA  +F+ M+ +G  P+  ++ TLI+G+CK   ++KA+ LF  M ++ + PD VTY+TL
Sbjct: 377 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 436

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           I G C V  ++ A  L+ +M++    PN ++Y IL++  C   ++ EA  L   + G  +
Sbjct: 437 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 496

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            P +   N  I G CR+G+   A +  S + S+G+ PD  +Y+ +ING  R   +D+A  
Sbjct: 497 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 556

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           L  +M+  G   +   YN I  GF R      +  +L  M+ +G + D ST T  +   +
Sbjct: 557 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVK-ML 615

Query: 462 SQNNLKEAFRFHDEMLQRG 480
           S + L ++ +   ++L+ G
Sbjct: 616 SDDGLDQSLK---QILRNG 631



 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 253/480 (52%), Gaps = 19/480 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ P+  T + LIN++C    +  AF ++  +   G +P   T+ +LI G+C +G
Sbjct: 86  QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEG 145

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+M+  G  PD  TY TL+   C+  N S A  +   M ++   P++ +++
Sbjct: 146 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 205

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++ Q+  A   F EM + G+ PD   Y  +I+  C          + +EM++ 
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + DVV++NT+++ LC+   +TEA D+ ++M++RGV P+  T+T L+ GHC    M++A
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE-------------------MEKANKLWAD 300
           + +FD M  K   P++++YNTLI+G+CK+                     M++A K++  
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDT 385

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   PN ISY  LINGYC +  + +A  L+ EM  + + P  V+ +T+I G C    
Sbjct: 386 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 445

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +MV+    P+ ++Y  L++   +   + +A AL+  +E   L PD+   N+
Sbjct: 446 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 505

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            + G CR G +  +  +   +  KGL PD  TY+ +ING   +  L EA +   EM + G
Sbjct: 506 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 565



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 227/458 (49%), Gaps = 19/458 (4%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           ++ A    N M      P    +N L+  + K         +  +M   G+ P+  T + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   C    +  A  +  ++ + G  PD  +F+TLI      G++  AL  F +M   G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             PD V Y  +ING C+ G    A+++   M++K C  +V  YNTI++ LC+ + +TEA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +LF+EM+ +G+ PD +T+ +LIH  C          L + M    I PD+V++NT++D  
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK G++ +A+ +   MI R + PN ++Y  L++G+C +  + EA +++  MV KG  P +
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 346 VSCNTIIKGYCRSGDASKADEF-------------------LSKMVSEGVDPDSISYNTL 386
           +S NT+I GYC+     KA  +                      MV +G  P+ ISYNTL
Sbjct: 342 ISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTL 401

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           ING+ + + +DKA  L  +M  Q L+PD +TY+ ++ G C   R+ D+  +   M+    
Sbjct: 402 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 461

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+  TY  L++       L EA      +      PD
Sbjct: 462 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 499



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 204/404 (50%), Gaps = 19/404 (4%)

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
           + ++N    +S     +  A   F  M R    P  V F+ L+   ++       L    
Sbjct: 26  SLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSH 85

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           +M S G+ P+     I+IN +C    V  A  +  ++L+ G   D  T+ T++ G+C   
Sbjct: 86  QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEG 145

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            + EA  LF++M+  G  PD  T+ TLI+G CK GN + A+ L   M QK+ +P++  YN
Sbjct: 146 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 205

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           T+ID  CK  ++ +A  L+++M+++ ISP+  +Y  LI+  C++        L  EMV  
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
            I P +VS NT++   C+ G  ++A + + KM+  GV+P+ ++Y  L++G      MD+A
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGR-------------------MHDSELILWR 440
             +   M  +G +P+VI+YN ++ G+C+  R                   M ++  +   
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDT 385

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M+ KG  P+  +Y TLING+     + +A     EM ++  +PD
Sbjct: 386 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPD 429


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  301 bits (771), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 161/486 (33%), Positives = 272/486 (55%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    +DSA     ++ + G++P+ VTY+ LI   C  G +E+A +L   M   G
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 390

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF  NSL+ G  K    + A ++ DE +  G++ +  TYN ++   C+   M EA 
Sbjct: 391 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEAC 449

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G+ P++VS++ +I    R G +D A   F +M +  L P+ V Y+I+I+G 
Sbjct: 450 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGN 509

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   +AL + D+ML         T+NTI+NGLC+   ++EA D     LE G  P  
Sbjct: 510 FKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSC 569

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++ G  K+GN++ AL ++  M +  + P++VTY +LI+GFCK   ++ A K   +
Sbjct: 570 MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDE 629

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + +  +  +Y  LI+G+C    +  A  L++E++  G+ P  +  N++I G+    +
Sbjct: 630 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 689

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A  +  KM+++ +  D  +Y TLI+G ++E  +  A  L  +M ++G+VPD+IT++V
Sbjct: 690 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 749

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C +G++ ++  IL  M  K + P    Y TLI G+  + NLKEAF  HDEML RG
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809

Query: 481 FVPDDA 486
            VPDD 
Sbjct: 810 LVPDDV 815



 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 270/484 (55%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL + + I   +    +M  +G+Y D  T + ++ A  +EG +EEA +       +G
Sbjct: 191 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 250

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y+ +I  +CKK   +   E+L+EM + G  P  AT+ +++V    + NM EA 
Sbjct: 251 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEAL 310

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM   G   ++V  ++L+  +   G LD AL  F ++   GL P+ V Y+++I G 
Sbjct: 311 RLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC 370

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + +A ++  +M   G    V   N++L G  +A +  EA  LF+E ++ GV  + 
Sbjct: 371 CNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANI 429

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  ++   CK G M++A +L D M  + + P++V+YN +I G C+ G M+ A+ +++D
Sbjct: 430 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSD 489

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++R + PN ++Y ILI+G    G   +A  L+ +M+   I PT  + NTII G C+ G 
Sbjct: 490 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 549

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A + L   + EG  P  ++YN++++GF++E N+D A A+  +M   G+ P+V+TY  
Sbjct: 550 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 609

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+  R+  +      M EKGL  D + Y+ LI+G   + +++ A     E+L+ G
Sbjct: 610 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 669

Query: 481 FVPD 484
             P+
Sbjct: 670 LSPN 673



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 140/389 (35%), Positives = 231/389 (59%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K+D A   L  M  +G+ P+ V+YN +I  +CR+G ++ A  + + M  + 
Sbjct: 435 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 494

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP V TY+ LI+G  KKG  ++A ++ D+ML + ++P   T+NT++   C+   MSEA 
Sbjct: 495 LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEAR 554

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +        G  P  +++++++  F + G +D AL  +REM   G+ P+ V YT +ING+
Sbjct: 555 DKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGF 614

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  +  ALK RDEM EKG  +DV  Y+ +++G C+ + +  A DLF E+LE G+ P+ 
Sbjct: 615 CKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNR 674

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + ++I G     NM  AL  +  M    I  D+ TY TLIDG  K G +  A+ L+ +
Sbjct: 675 IVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYME 734

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+ I P+ I++ +L+NG C+ G +  A ++  EM  K + P+++  NT+I GY R G+
Sbjct: 735 MLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGN 794

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLING 389
             +A     +M+  G+ PD ++Y+ LING
Sbjct: 795 LKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/513 (30%), Positives = 263/513 (51%), Gaps = 45/513 (8%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           DH I+ AK F  E++ +        +N L+NAY R   +E A    N+M  + + P V  
Sbjct: 135 DHLINCAKRFDFELDHR-------VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPY 187

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEAEEIFCEM 126
            N L+  L ++      +++ ++M+  G+  D  T + ++V +C KE  + EAEE F E 
Sbjct: 188 MNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVH-VMVRACLKEGRVEEAEEYFRET 246

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
             RGV  D  ++S +I    +    +  L    EMK  G VP    +T +I      G +
Sbjct: 247 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 306

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
           +EAL++++EM+  G  M++V   +++ G C    L  A +LFN++ E G+FP+  T++ L
Sbjct: 307 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 366

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKP--------------------------------- 273
           I G C  GN+ KA  L+  M    I P                                 
Sbjct: 367 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 426

Query: 274 -DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            +I TYN ++   CK G+M++A  L  +M+++ + PN +SY  +I G+C  G++  A  +
Sbjct: 427 ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 486

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + +M+ + +KP +V+ + +I G  + GD+ KA +   +M+S  + P   ++NT+ING  +
Sbjct: 487 FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK 546

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRS 451
              M +A   +     +G +P  +TYN I+ GF ++G + DS L ++R M E G++P+  
Sbjct: 547 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI-DSALAVYREMCEFGVSPNVV 605

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TYT+LING    N +  A +  DEM ++G   D
Sbjct: 606 TYTSLINGFCKSNRIDLALKTRDEMREKGLELD 638



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 143/252 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+   K+  IDSA     EM + GV P+ VTY +LIN +C+   ++ A +  + M  KG
Sbjct: 575 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 634

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  V  Y++LI+G CK+   + A+++  E+L++GLSP+   YN+++       NM  A 
Sbjct: 635 LELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAAL 694

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + +M    +  D+ +++TLI    + G+L  A   + EM S G+VPD + + +++NG 
Sbjct: 695 VWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGL 754

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A K+ +EM  K     V+ YNT++ G  R   L EA  L +EML+RG+ PD 
Sbjct: 755 CNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDD 814

Query: 241 YTFTTLIHGHCK 252
            T+  LI+G  K
Sbjct: 815 VTYDILINGKFK 826



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 50/80 (62%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LC   ++++A+  L EM++K + P  + YNTLI  Y REG L+EAF L + M  +G
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809

Query: 61  LKPGVFTYNSLINGLCKKGR 80
           L P   TY+ LING  K  R
Sbjct: 810 LVPDDVTYDILINGKFKGDR 829



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%)

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N ++  Y R+     A +  + M+ + V P     N L+   VR   + +   L +KM  
Sbjct: 154 NYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVL 213

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+  D  T +V++    ++GR+ ++E       E+G+  D   Y+ +I     + N   
Sbjct: 214 RGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNL 273

Query: 469 AFRFHDEMLQRGFVPDDA 486
                +EM +RG+VP +A
Sbjct: 274 GLELLEEMKERGWVPSEA 291


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  301 bits (770), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 159/484 (32%), Positives = 268/484 (55%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+ ++  A+    EM  + V P+ +TYNTLI+ YC+ G LEEAF +   M  + 
Sbjct: 223 VIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + T+NSL+NGLC+    + A+ VL+EM   G  PD  TY TL     +  N+  + 
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASI 342

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E  R+GV     + S L+    + G +++A    ++    GL P  V +  I+NGY
Sbjct: 343 TLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGY 402

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A    ++M   G   + VTYN+++   C  K + EA+    +M+E+GV P+ 
Sbjct: 403 CQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNV 462

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G+ +    ++   + + M +K +KP++++Y  LI+  CK   + +A  +  D
Sbjct: 463 ETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGD 522

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R + PN   Y +LI+G C  G + +AFR + EMV + I PTLV+ N +I G C+ G 
Sbjct: 523 MVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGK 582

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A+   S++  +G+  D I+YN+LI+G+    N+ KA  L   M+  G+ P + TY+ 
Sbjct: 583 VMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHR 642

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  ++G +   E I   M++  L PDR  Y  LI+ +V   ++++A   H  M  +G
Sbjct: 643 LIAGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQG 701

Query: 481 FVPD 484
             PD
Sbjct: 702 IQPD 705



 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 153/472 (32%), Positives = 263/472 (55%), Gaps = 1/472 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D+ ++F  E+ + G+ PD   Y   I A  + G L+ A +LM  M   G+ PGVF YN +
Sbjct: 165 DTLQLF-SEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVV 223

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I GLCK+ R   A+++ DEML   ++P+  TYNTL+   C+   + EA  I   M    V
Sbjct: 224 IGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENV 283

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P I++F++L+    R   ++ A     EM+  G VPD   YT + +G+ + G V  ++ 
Sbjct: 284 EPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASIT 343

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + +E + KG  +   T + +LN LC+   + +A+++  + LE G+ P    F T+++G+C
Sbjct: 344 LSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYC 403

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           + G++NKA    + M    ++P+ VTYN+L+  FC++  ME+A K    M+ + + PN  
Sbjct: 404 QVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVE 463

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  LI+GY         F++  EM  KG+KP ++S   +I   C+  +  +A+  L  M
Sbjct: 464 TYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDM 523

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           V  GV P++  YN LI+G      +  AF    +M  + +VP ++TYN+++ G C++G++
Sbjct: 524 VHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKV 583

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            ++E +   +  KGL+ D  TY +LI+G+ S  N+++A   ++ M + G  P
Sbjct: 584 MEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKP 635



 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 254/457 (55%), Gaps = 1/457 (0%)

Query: 28  PDTVTYNTLINAYCREG-FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE 86
           P    ++ ++ + C E   + E+ +L   M   G+ P V + N  +  L    R +   +
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQ 168

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           +  E+++ GL PD   Y   +  + +  ++  A E+   M R GV+P +  ++ +IG   
Sbjct: 169 LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLC 228

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           +  ++  A   F EM    + P+ + Y  +I+GYC+ G + EA  +R+ M  +     ++
Sbjct: 229 KEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T+N++LNGLCRA+M+ EA  +  EM   G  PD +T+TTL  GH K GN++ ++ L +  
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            +K ++    T + L++  CK G MEKA ++    +   ++P  + +  ++NGYC +G +
Sbjct: 349 VRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDI 408

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A+    +M   G++P  V+ N+++K +C   +  +A++ + KMV +GV P+  +YNTL
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G+ R    D+ F ++ +ME +GL P+VI+Y  ++   C+   + ++E+IL  M+ +G+
Sbjct: 469 IDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGV 528

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            P+   Y  LI+G      LK+AFRF DEM+ R  VP
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVP 565



 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 163/510 (31%), Positives = 262/510 (51%), Gaps = 44/510 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTL------------------------ 36
           ++N LC+   ++ A+  L EME  G  PD  TY TL                        
Sbjct: 293 LLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKG 352

Query: 37  -----------INAYCREGFLEEAFQLMNSMSGKGLKP-GVFTYNSLINGLCKKGRCDRA 84
                      +NA C+EG +E+A +++      GL P GVF +N+++NG C+ G  ++A
Sbjct: 353 VQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVF-FNTIVNGYCQVGDINKA 411

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
              +++M  +GL P+  TYN+L+ + C  +NM EAE+   +M  +GV P++ +++TLI  
Sbjct: 412 YTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDG 471

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + R+   DR      EM+  GL P+ + Y  +IN  C++  +LEA  +  +M+ +G V +
Sbjct: 472 YGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPN 531

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
              YN +++G C A  L +A   F+EM+ R + P   T+  LI+G CK G + +A NL  
Sbjct: 532 AQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLAS 591

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            +T+K +  D++TYN+LI G+   G ++KA +L+  M    I P   +Y  LI G C   
Sbjct: 592 EITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKE 650

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +    +++ EM+   + P  V  N +I  Y   GD  KA    S M ++G+ PD ++YN
Sbjct: 651 GLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYN 710

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI G  +E  M K   LV+ M+ +GL+P   TY++++ G C+      + +    M E 
Sbjct: 711 CLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFEN 770

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           G  P  S    LI G      L+E  R HD
Sbjct: 771 GFTPSVSICDNLITG------LREEGRSHD 794



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 231/430 (53%), Gaps = 17/430 (3%)

Query: 72  INGLCKKGRCDRAKEVLDEML----------------QMGLSPDTATYNTLLVESCRKEN 115
           +  L ++GR + A+ ++  ML                 +  +P    ++ +L+  C +  
Sbjct: 67  LQTLLQQGRTETARRLIRSMLLPKSPFSSPSHLYTLFSLSSTPMKPLFSDMLLSICSESK 126

Query: 116 M-SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           M SE+ E++  M + GV P + S +  +       + +  L  F E+  +GL PD  +Y 
Sbjct: 127 MVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYG 186

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
             I    + G +  A+++   M   G    V  YN ++ GLC+ K + +A+ LF+EML+R
Sbjct: 187 KAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDR 246

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            V P+  T+ TLI G+CK G + +A N+ + M  ++++P I+T+N+L++G C+   ME+A
Sbjct: 247 RVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEA 306

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            ++  +M      P+  +Y  L +G+   G+V  +  L  E V KG++    +C+ ++  
Sbjct: 307 QRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNA 366

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+ G+  KA+E L K +  G+ P  + +NT++NG+ +  +++KA+  + KME  GL P+
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPN 426

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +TYN ++  FC    M ++E  + +M+EKG+ P+  TY TLI+G+         F+  +
Sbjct: 427 HVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILE 486

Query: 475 EMLQRGFVPD 484
           EM ++G  P+
Sbjct: 487 EMEKKGLKPN 496



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 134/411 (32%), Positives = 206/411 (50%), Gaps = 34/411 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN  C+   I+ A   + +ME  G+ P+ VTYN+L+  +C    +EEA + +  M  KG
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LI+G  +    DR  ++L+EM + GL P+  +Y  L+   C+  N+ EAE
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M  RGV P+   ++ LI      G+L  A  +F EM +  +VP  V Y I+ING 
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL------------------------- 215
           C+ G V+EA  +  E+  KG   DV+TYN++++G                          
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTL 637

Query: 216 ---------CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
                    C  + L   + ++ EML+  + PD   +  LIH + + G++ KA +L   M
Sbjct: 638 NTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAM 697

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             + I+PD +TYN LI G  K G M K   L  DM  R + P   +Y ILI G+C +   
Sbjct: 698 EAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDF 757

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
             A+  + EM   G  P++  C+ +I G    G +  AD   S+M  +G D
Sbjct: 758 DGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKD 808


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  301 bits (770), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 153/459 (33%), Positives = 260/459 (56%), Gaps = 4/459 (0%)

Query: 1   MVNALCK---DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++N  C    DH    A   L  M + G+ P+ VT++TL+N    +  + +A +L + M 
Sbjct: 16  LINCFCHSNHDH-FHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMV 74

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             G +P V TY+++INGLCK G    A ++L +M + G  P+   Y+T++   C+ + ++
Sbjct: 75  KMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLIT 134

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA E   EM  RG++P++V++S+++  F   G+ + A   F++M    ++PD V + I++
Sbjct: 135 EAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILV 194

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G  + G +LEA  + + M+EKG   +V TYN +++G C    + EA  LFN M+ +G  
Sbjct: 195 DGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCA 254

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P   ++  LI GHCK G +++A  L   M+ K++ PD VTY+TL+ GFC+ G  + A KL
Sbjct: 255 PSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKL 314

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M S  + P+ ++Y I+++G C  GH+ EAF L   M    I+P +     +I+G C 
Sbjct: 315 LEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCN 374

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G    A E  S +  +G+ PD ++Y  +I+G ++    ++A  L   M   G +P+  T
Sbjct: 375 FGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCT 434

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           YNVI+ GF R G   ++  ++  M+ +G + D ST+  L
Sbjct: 435 YNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 258/468 (55%), Gaps = 2/468 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGF--LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKK 78
           M+   + PD  T   LIN +C         AF ++ +M   GL+P   T+++L+NGL  K
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
            +   A ++ DEM++MG  PD  TY+T++   C+  + + A ++  +M  +G  P++V +
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           ST+I    ++  +  A+ +  EM + G+ P+ V Y+ I++G+C  G   EA  +  +M+E
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
           +  + D VT+N +++GL +  M+ EA  +F  M+E+GV P+  T+  L+ G+C    M++
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  LF+IM +K   P + +YN LI G CK G +++A  L A+M  + ++P+ ++Y  L+ 
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G+C  G   +A +L  EM   G+ P L++ + ++ G C+ G   +A E L  M    ++P
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +   Y  LI G      ++ A  L S +  +G+ PDV+TY V+++G  + G  +++  + 
Sbjct: 361 NIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELF 420

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             M   G  P+  TY  +I G +   +   A R  +EM+ RGF  D +
Sbjct: 421 RDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSS 468



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 220/395 (55%), Gaps = 2/395 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK      A   L +ME+KG  P+ V Y+T+I++ C++  + EA + ++ M  +G
Sbjct: 88  IINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRG 147

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS-EA 119
           + P V TY+S+++G C  GR + A  +  +M++  + PDT T+N +LV+   KE M  EA
Sbjct: 148 ISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFN-ILVDGLSKEGMILEA 206

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +F  M  +GV P++ +++ L+  +    Q+D A   F  M   G  P    Y I+I G
Sbjct: 207 QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG 266

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C++G + EA  +  EM  K    D VTY+T++ G C+     +A  L  EM   G+ PD
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++ ++ G CK G++++A  L   M +  I+P+I  Y  LI G C  G++E A +L++
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFS 386

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           ++  + I P+ ++Y ++I+G    G   EA  L+ +M   G  P   + N II+G+ R+G
Sbjct: 387 NLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNG 446

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           D S A   + +MV  G   DS ++  L +   R+E
Sbjct: 447 DTSNAGRLIEEMVGRGFSADSSTFQMLSDLESRDE 481


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  301 bits (770), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 260/486 (53%), Gaps = 3/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+      A +FL  +      P  V+Y TL+ A C E    +A  L+  M   G
Sbjct: 84  VLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASG 143

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY +LI GLC     D+A E+L EM + G+ P+   Y+ LL   C+        
Sbjct: 144 VRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVS 203

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EMS RG+ PD+V ++ LI    R G++ +A     +M   GL P+ V Y ++IN  
Sbjct: 204 KVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSM 263

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML--ERGVFP 238
           C+ G V EA+ +R+ MLEKG  +D VTYNT++ GL     + EA  L  EM+  E  V P
Sbjct: 264 CKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEP 323

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF ++IHG CK G M +A  + D+M +     ++VT+N LI G  +V +++KA +L 
Sbjct: 324 NVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELM 383

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M S  + P+  +Y ILING+C M  V  A  L  +M   GI+P LV    ++   C  
Sbjct: 384 DEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQ 443

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A  F  +M  +    D ++Y+T+I+G  R  +   A   +  M ++GL+PD +TY
Sbjct: 444 GMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTY 502

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++++  F   G +  +E +L +M   G  PD + + +LI G+ ++ + ++      EM  
Sbjct: 503 SMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTA 562

Query: 479 RGFVPD 484
           +    D
Sbjct: 563 KDIALD 568



 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/461 (32%), Positives = 254/461 (55%), Gaps = 5/461 (1%)

Query: 29  DTVTYNTLINAYCREG-FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           D V+YNT++ A CR+G  L+ A  L+  M+ +  +P   +Y +L+  LC + R  +A  +
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L +M   G+ PD  TY TL+   C   ++ +A E+  EM   G+ P++V +S L+  + +
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+ +     F EM   G+ PD V+YT +I+  CR G V +A ++ D+M+E+G   +VVT
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD--I 265
           YN ++N +C+   + EA  L N MLE+GV  D  T+ TLI G      M++A+ L +  I
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
             +  ++P++VT+N++I G CK G M +A ++   M     + N +++ +LI G   +  
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A  L  EM   G++P   + + +I G+C+     +A+  LSKM  +G++P+ + Y  
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIP 435

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+     +  M++A     +M     + DV+ Y+ ++ G CR      +E  L  M+++G
Sbjct: 436 LLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L PD  TY+ LIN   +  +L  A R   +M   GFVPD A
Sbjct: 495 LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVA 535



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 236/460 (51%), Gaps = 38/460 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLI----------------------- 37
           ++ ALC + +   A   L +M+  GV PD VTY TLI                       
Sbjct: 119 LMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG 178

Query: 38  ------------NAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                         YC+ G  E   ++   MSG+G++P V  Y  LI+ LC++G+  +A 
Sbjct: 179 IEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKAT 238

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +V+D+M++ GL P+  TYN L+   C++ ++ EA  +   M  +GVA D V+++TLI   
Sbjct: 239 QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298

Query: 146 SRNGQLDRALMYFREMKSAGLV--PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
           S   ++D A+    EM     +  P+ V +  +I+G C+ G + +A ++RD M E GC  
Sbjct: 299 SGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCAC 358

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           ++VT+N ++ GL R   + +A +L +EM   G+ PD +T++ LI+G CK   +++A +L 
Sbjct: 359 NLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLL 418

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M +  I+P++V Y  L+   C+ G ME+A   + D + +    + ++Y  +I+G C +
Sbjct: 419 SKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFF-DEMHKNCKLDVVAYSTMIHGACRL 477

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
                A      M+ +G+ P  V+ + +I  +  SGD   A+  L +M + G  PD   +
Sbjct: 478 RDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVF 537

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           ++LI G+  + + +K   L+ +M  + +  D    + I T
Sbjct: 538 DSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYT 577



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 150/281 (53%), Gaps = 2/281 (0%)

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           V D V+YNT+L  LCR     +A      ++     P   ++TTL+   C +    +A+ 
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L   M    ++PD+VTY TLI G C   +++KA +L  +M    I PN + Y  L+ GYC
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G      +++ EM G+GI+P +V    +I   CR G   KA + + KM+  G++P+ +
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +YN LIN   +E ++ +A +L + M  +G+  D +TYN ++TG      M ++  +L  M
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314

Query: 442 I--EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I  E  + P+  T+ ++I+G      +++AF+  D M + G
Sbjct: 315 IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG 355



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +A  FL+ ++  G    S   N L+    R   + ++ AL+S + +   V D ++YN +L
Sbjct: 33  RAAPFLAVLLRRGRAEASARLNRLL----RLVPLPESPALLSSLPS---VRDAVSYNTVL 85

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
              CRQG   D+ L L R++     P   +YTTL+    ++    +A     +M   G  
Sbjct: 86  AALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVR 145

Query: 483 PD 484
           PD
Sbjct: 146 PD 147


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  301 bits (770), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 275/484 (56%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC++ +I  A+    EM    +    VTYNTLI+ YC+ G L+ AF++   M  K 
Sbjct: 217 LIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKS 276

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + T+NSL++GLCK  +   A+ +L EM   G  PD  TY+ L     R ++ + A 
Sbjct: 277 VAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAM 336

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++ + + +G+  +  + S L+    + G++++A    ++    GLV D V+Y   +NGY
Sbjct: 337 ELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGY 396

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A+   + M   G   + +T+N++++  C  K + +A++   +M E+GV P  
Sbjct: 397 CRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSV 456

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G+ K    ++   + + M +  +KP++V+Y +LI+  CK G++ +A  +  D
Sbjct: 457 ETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRD 516

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI R + PN   Y +LI+G C +G V +A R + EM+   I PTLV+ N +I G C+ G 
Sbjct: 517 MICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGK 576

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A++FL+++ S G  PD I+YN+LI+G+    N+ K   L   M+N G+ P V TY+ 
Sbjct: 577 LTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHP 636

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G  ++G +   E +   M++  L PDR  Y  +I+ +    N ++A+  H  ML +G
Sbjct: 637 LISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQG 695

Query: 481 FVPD 484
             PD
Sbjct: 696 IHPD 699



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 153/487 (31%), Positives = 266/487 (54%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K+  A+  L EME  G  PD  TY+ L +   R      A +L    + KG
Sbjct: 287 LLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKG 346

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++   +T + L+NGLCK+G+ ++A+E+L +  + GL  D   YNT +   CR  +M++A 
Sbjct: 347 IRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAI 406

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M   G+ P+ ++F++LI  F    ++D+A  + ++M   G+ P    Y  +I+GY
Sbjct: 407 LTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGY 466

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +        ++ ++M E G   +VV+Y +++N LC+   + EA+ +  +M+ RGV P+ 
Sbjct: 467 GKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNA 526

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LI G C  G +  AL  FD M +  I P +VTYN LIDG CK G++ +A      
Sbjct: 527 QVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQ 586

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S   SP+ I+Y  LI+GY + G+V++   L+  M   GIKPT+ + + +I G  + G 
Sbjct: 587 ITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG- 645

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
               ++  ++M+   + PD + YN +I+ +    N  KA++L   M +QG+ PD +TYN 
Sbjct: 646 IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNS 705

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  R+G++ + + ++  M  K L P   TY  L+ GH    +   A+ ++ EM++  
Sbjct: 706 LILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENN 765

Query: 481 FVPDDAF 487
           F+P+ + 
Sbjct: 766 FLPNASI 772



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 254/464 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E+E  G   DT  Y   I A  +   L+   + ++SM  +G++P VF YN LI GLC++ 
Sbjct: 166 EIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREK 225

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A+++ DEM  + L     TYNTL+   C+   +  A ++   M  + VAP+I++F+
Sbjct: 226 RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           +L+    +  ++  A    +EM+  G +PD   Y+I+ +G  R      A+++ ++  EK
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK 345

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  ++  T + +LNGLC+   + +A+++  +  E G+  D   + T ++G+C+ G+MNKA
Sbjct: 346 GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKA 405

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           +   + M    ++P+ +T+N+LID FC + EM+KA +    M  + ++P+  +Y  LI+G
Sbjct: 406 ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDG 465

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y  +      F++  +M   G+KP +VS  ++I   C+ G   +A+  L  M+  GV P+
Sbjct: 466 YGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPN 525

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +  YN LI+G      +  A     +M    + P ++TYNV++ G C++G++ ++E  L 
Sbjct: 526 AQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLT 585

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           ++   G +PD  TY +LI+G+ +  N+ +    ++ M   G  P
Sbjct: 586 QITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKP 629



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 245/446 (54%), Gaps = 1/446 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  K++ A+  L +  + G+  D V YNT +N YCR G + +A   +  M   G
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P   T+NSLI+  C     D+A+E + +M + G++P   TYNTL+    +        
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCF 476

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  +M   GV P++VS+ +LI    ++G++  A +  R+M   G++P+  +Y ++I+G 
Sbjct: 477 QILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGS 536

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +AL+  DEM+       +VTYN +++GLC+   LTEA+D   ++   G  PD 
Sbjct: 537 CMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDV 596

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G+   GN++K L L++ M    IKP + TY+ LI G  K G +E   KL+ +
Sbjct: 597 ITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNE 655

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P+ + Y  +I+ Y  +G+  +A+ L   M+ +GI P  ++ N++I G+ R G 
Sbjct: 656 MLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGK 715

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S   + ++ M ++ + P + +Y+ L+ G    ++   A+    +M     +P+    N 
Sbjct: 716 LSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNE 775

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           +  G  ++GR+ + ++I   M  KG+
Sbjct: 776 LTAGLEQEGRLQEVQVICSEMNVKGI 801



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/450 (30%), Positives = 243/450 (54%), Gaps = 4/450 (0%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           L++  C+   L EA +L   M   G  P + + + L + L  + +  +  ++  E+   G
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSG 171

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
              DT  Y   +  + + +N+    E    M +RGV P++  ++ LIG   R  ++  A 
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAE 231

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
             F EM +  LV   V Y  +I+GYC+ G +  A KMR+ M EK    +++T+N++L+GL
Sbjct: 232 KMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGL 291

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG--HCKDGNMNKALNLFDIMTQKSIKP 273
           C+ + + EA  L  EM   G  PD YT++ L  G   C DG  N A+ L++  T+K I+ 
Sbjct: 292 CKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG--NGAMELYEQATEKGIRI 349

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           +  T + L++G CK G++EKA ++        +  + + Y   +NGYC +G + +A    
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTI 409

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
             M   G++P  ++ N++I  +C   +  KA+E++ KM  +GV P   +YNTLI+G+ + 
Sbjct: 410 ERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKL 469

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
              D+ F ++ +ME  G+ P+V++Y  ++   C+ G++ ++E++L  MI +G+ P+   Y
Sbjct: 470 CTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVY 529

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             LI+G      +K+A RF DEM++    P
Sbjct: 530 NMLIDGSCMVGKVKDALRFFDEMMRSEISP 559



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 220/433 (50%)

Query: 52  LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC 111
           L   +   G +   F Y   I    K        E LD M + G+ P+   YN L+   C
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           R++ + +AE++F EM    +   IV+++TLI  + + G+LD A      MK   + P+ +
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            +  +++G C+   + EA  +  EM   G + D  TY+ + +GL R      A +L+ + 
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
            E+G+  + YT + L++G CK G + KA  +    T+  +  D V YNT ++G+C++G+M
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
            KA      M S  + PN I++  LI+ +C M  + +A     +M  KG+ P++ + NT+
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I GY +     +  + L +M   GV P+ +SY +LIN   ++  + +A  ++  M  +G+
Sbjct: 463 IDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGV 522

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           +P+   YN+++ G C  G++ D+      M+   ++P   TY  LI+G   +  L EA  
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582

Query: 472 FHDEMLQRGFVPD 484
           F  ++   G  PD
Sbjct: 583 FLTQITSSGHSPD 595



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 188/414 (45%), Gaps = 70/414 (16%)

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           LL   C+ + + EA E++  M R G  P +VS S L        Q  + +  F E++++G
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSG 171

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
              D  +Y   I    +    L+ LKM  E L+                           
Sbjct: 172 FRTDTFMYAKAIQAAVK----LQNLKMGMEFLD--------------------------- 200

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
                M +RGV P+ + +  LI G C++  +  A  +FD M   ++   IVTYNTLIDG+
Sbjct: 201 ----SMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGY 256

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT- 344
           CKVGE++ A K+   M  + ++PN I++  L++G C M  + EA  L  EM   G  P  
Sbjct: 257 CKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDG 316

Query: 345 ---------LVSCN-------------------------TIIKGYCRSGDASKADEFLSK 370
                    L+ C+                          ++ G C+ G   KA+E L K
Sbjct: 317 YTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKK 376

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
               G+  D + YNT +NG+ R  +M+KA   + +ME+ GL P+ IT+N ++  FC    
Sbjct: 377 FTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKE 436

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M  +E  + +M EKG+ P   TY TLI+G+         F+  ++M + G  P+
Sbjct: 437 MDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPN 490



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 164/323 (50%), Gaps = 1/323 (0%)

Query: 163 SAGLVPDNV-LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
           SA  +P  + L  ++++  C++  + EA+++ + M   G +  +V+ + + + L   K  
Sbjct: 98  SACSIPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQF 157

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
            +  DLF E+   G   D + +   I    K  N+   +   D M ++ ++P++  YN L
Sbjct: 158 VKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVL 217

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           I G C+   +  A K++ +M +  +  + ++Y  LI+GYC +G +  AF++   M  K +
Sbjct: 218 IGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSV 277

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            P +++ N+++ G C+     +A   L +M   G  PD  +Y+ L +G +R ++ + A  
Sbjct: 278 APNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAME 337

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           L  +   +G+  +  T +++L G C+QG++  +E IL +  E GL  D   Y T +NG+ 
Sbjct: 338 LYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYC 397

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
              ++ +A    + M   G  P+
Sbjct: 398 RIGDMNKAILTIERMESFGLRPN 420



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 137/285 (48%)

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           + +   + +L+  C++KML EA +L+  M   G  P   + + L      +    K ++L
Sbjct: 104 LRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDL 163

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  +     + D   Y   I    K+  ++   +    M  R + PN   Y +LI G C 
Sbjct: 164 FMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCR 223

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
              + +A +++ EM    +  ++V+ NT+I GYC+ G+   A +   +M  + V P+ I+
Sbjct: 224 EKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIIT 283

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           +N+L++G  +   M +A +L+ +ME  G +PD  TY+++  G  R    + +  +  +  
Sbjct: 284 FNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQAT 343

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           EKG+  +  T + L+NG   Q  +++A     +  + G V D+  
Sbjct: 344 EKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 75/162 (46%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C    I+  +    EM Q  + PD V YN +I+ Y   G  ++A+ L   M  +G+ P  
Sbjct: 641 CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDK 700

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TYNSLI G  ++G+    K++++ M    L+P   TY+ L+   C  ++ S A   + E
Sbjct: 701 MTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYRE 760

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
           M      P+    + L     + G+L    +   EM   G++
Sbjct: 761 MVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGII 802


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  301 bits (770), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 150/463 (32%), Positives = 262/463 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV P+  TYN++++ YC  G  +EA   +  M   G
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYNSL++ LCK GRC  A+++ D M + GL P+  TY TLL     K  + E  
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 359

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ P+   FS LI  +++ G++D+A++ F +M+  GL PD V Y  +I   
Sbjct: 360 GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A++  ++M+++      + YN++++ LC      +A +L  EML+RG+  D 
Sbjct: 420 CKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDT 479

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I  HCK+G + ++  LFD+M +  +KP+I+TY+TLIDG+C  G+M++A KL A 
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLAS 539

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++Y  LINGYC +  + +A  L+ EM   G+ P +++ N I++G  ++  
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    +   G   +  +YN +++G  +    D+A  +   +    L  +  T+N+
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           ++    + GR  +++ +   +   GL PD  TY+ +    + Q
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702



 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 164/514 (31%), Positives = 269/514 (52%), Gaps = 38/514 (7%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC D +  D+  + L  M Q G  P+  +YN L+   C E   +EA +L+  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 60  G--LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V +Y ++ING  K+G  D+A     EML  G+ P+  TYN+++   C+ + M 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMD 251

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A E+   M + GV P+  ++++++  +  +GQ   A+ + ++M S G+ PD V Y  ++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  C+NG   EA KM D M ++G   ++ TY T+L G      L E   L + M+  G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+ Y F+ LI  + K G +++A+ +F  M Q+ + PD VTY T+I   CK G +E A + 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 298 WADMISRKISPNYISY--------------------------GI---------LINGYCS 322
           +  MI  ++SP  I Y                          GI         +I+ +C 
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V E+ +L+  MV  G+KP +++ +T+I GYC +G   +A + L+ MVS G+ PD ++
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNTLING+ +   M+ A  L  +ME+ G+ PD+ITYN+IL G  +  R   ++ +   + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           E G   + STY  +++G    N   EA R    +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 149/462 (32%), Positives = 245/462 (53%), Gaps = 3/462 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P+  TY  LI + C  G L+  F  + ++  KG +     +  L+ GLC   R   A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG--VAPDIVSFSTLI 142
           + VL  M Q+G  P+  +YN LL   C +    EA E+   M   G    PD+VS++T+I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F + G LD+A   + EM   G++P+ V Y  II   C+   + +A+++   M++ G +
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            +  TYN+I++G C +    EA     +M   GV PD  T+ +L+   CK+G   +A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           FD MT++ +KP+I TY TL+ G+   G + + + L   M+   I PN+  + ILI  Y  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V +A  ++ +M  +G+ P  V+  T+I   C+SG    A  +  +M+ E + P +I 
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN+LI+     +  DKA  L+ +M ++G+  D I +N I+   C++GR+ +SE +   M+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             G+ P+  TY+TLI+G+     + EA +    M+  G  PD
Sbjct: 507 RIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 234/469 (49%), Gaps = 35/469 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ +   A+     M ++G+ P+  TY TL+  Y  +G L E   L++ M   G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  + ++ LI    K+G+ D+A  V  +M Q GL+PDT TY T               
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT--------------- 414

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                               +IGI  ++G+++ A+ YF +M    L P N++Y  +I+  
Sbjct: 415 --------------------VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +A ++  EML++G  +D + +N+I++  C+   + E++ LF+ M+  GV P+ 
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNI 514

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI G+C  G M++A  L   M    +KPD VTYNTLI+G+CK+  ME A  L+ +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  +SP+ I+Y I++ G         A  L+  +   G +  L + N I+ G C++  
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A      +    +  ++ ++N +I   ++    D+A  L + +   GLVPDV TY++
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           +      QG + + + +   M E G   +     +++   + + ++  A
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 200/368 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K  K+D A +   +M Q+G+ PDTVTY T+I   C+ G +E+A +    M  + 
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG   YNSLI+ LC   + D+AKE++ EML  G+  DT  +N+++   C++  + E+E
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV P+I+++STLI  +   G++D A      M S G+ PD V Y  +INGY
Sbjct: 500 KLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM   G   D++TYN IL GL + +    A +L+  + E G   + 
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   ++AL +F  +    ++ +  T+N +I    KVG  ++A  L+A 
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +  + P+  +Y ++       G + E   L+  M   G        N+I++   + GD
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 361 ASKADEFL 368
            ++A  +L
Sbjct: 740 ITRAGTYL 747



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 38/218 (17%)

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK---------------------- 342
           +++PN  +YGILI   C  G +   F     ++ KG +                      
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 343 --------------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSISYNTL 386
                         P + S N ++KG C    + +A E L  M  +G D  PD +SY T+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           INGF +E ++DKA+    +M ++G++P+V+TYN I+   C+   M  +  +L  M++ G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+  TY ++++G+ S    KEA  F  +M   G  PD
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  301 bits (770), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 161/486 (33%), Positives = 272/486 (55%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  ++  AK    EM+     P++VT++ LI+ +C+ G +EE F L+  M   G
Sbjct: 170 VINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMG 229

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  VF Y++LI+G C KG  +R KE+ +EML+  ++P+  TY+ L+   C+K+   EA 
Sbjct: 230 LEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAA 289

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M+   V PD+V+++ L    S+NG+   A+     M   G  P+NV Y  IING 
Sbjct: 290 QMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGL 349

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER--GVFP 238
           C+ G V +AL + + M +KG   DVVTY+T++ GLC    + EA DL N ++ +   + P
Sbjct: 350 CKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKP 409

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D + F  +I   CK   +  A  ++  M ++    +IVTYN LIDG+   G++ KA +LW
Sbjct: 410 DVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELW 469

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            D +   ISPN  +Y +LING C M  ++ A  L+ +    G +PT+   NT++   CR 
Sbjct: 470 KDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRE 529

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               +A     +M +   DPD +S+N +I+G ++  +++ A  L+ +M N  LVPD IT+
Sbjct: 530 SSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITF 589

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++++  F + G++ ++  +  RM+  G  PD   + +L+ G+  +   ++      +M  
Sbjct: 590 SILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMAD 649

Query: 479 RGFVPD 484
           +  V D
Sbjct: 650 KDVVLD 655



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 243/467 (52%), Gaps = 6/467 (1%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           ++G + +   +N L+  +C+ G   +A  L   M    L P   +YN++INGLCK  R  
Sbjct: 122 KRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLV 181

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            AKE+  EM      P++ T++ L+   C+  ++ E   +  EM + G+  D+  +S LI
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F   G ++R    F EM    + P+ V Y+ ++N  C+     EA +M D M   GC 
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM--TGCK 299

Query: 203 M--DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           +  DVV Y  + +GL +    ++A  + + M++RG  P+  T+  +I+G CK+G ++ AL
Sbjct: 300 VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDAL 359

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK--ISPNYISYGILIN 318
            + + M +K  KPD+VTY+TL+ G C VG++++A  L   ++S++  I P+  ++ ++I 
Sbjct: 360 GILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQ 419

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
             C    +  A R++Y MV +G    +V+ N +I GY  +G  +KA E     V  G+ P
Sbjct: 420 ELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISP 479

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           ++ +Y  LING  + + +  A  L +K    G  P V  YN ++   CR+  +  +  + 
Sbjct: 480 NAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLF 539

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M     +PD  ++  +I+G +   +++ A     EML    VPD+
Sbjct: 540 QEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDN 586



 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 233/440 (52%), Gaps = 8/440 (1%)

Query: 27  YPDTV----TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           YP+++    + NTLI+   +    +    + + M+   + P   + ++LI       +  
Sbjct: 52  YPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPS 111

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A  VL  +++ G   +   +N LL   C+  +  +A ++FC M R  + PD VS++T+I
Sbjct: 112 FAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVI 171

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               +  +L  A   F+EMK     P++V ++ +I+G+C+NG V E   + +EM + G  
Sbjct: 172 NGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLE 231

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DV  Y+ +++G C    +    +LFNEML + V P+  T++ L++  CK     +A  +
Sbjct: 232 GDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQM 291

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            D MT   ++PD+V Y  L DG  K G    A K+   M+ R   PN ++Y  +ING C 
Sbjct: 292 LDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCK 351

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE--GVDPDS 380
            G V +A  +   M  KG KP +V+ +T++KG C  G   +A + L+ ++S+   + PD 
Sbjct: 352 EGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDV 411

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            ++N +I    ++  +  A  +   M  +G   +++TYN+++ G+   G++  + L LW+
Sbjct: 412 FAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKA-LELWK 470

Query: 441 -MIEKGLNPDRSTYTTLING 459
             ++ G++P+ +TYT LING
Sbjct: 471 DAVDSGISPNAATYTVLING 490



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 239/442 (54%), Gaps = 2/442 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C    I+  K    EM +K V P+ VTY+ L+NA C++   +EA Q++++M+G  
Sbjct: 240 LISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCK 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V  Y  L +GL K GR   A +VLD M++ G  P+  TYN ++   C++  + +A 
Sbjct: 300 VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDAL 359

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA--LMYFREMKSAGLVPDNVLYTIIIN 178
            I   M+++G  PD+V++STL+      G++D A  L+     K   + PD   + ++I 
Sbjct: 360 GILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQ 419

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
             C+   +  A ++   M+E+G   ++VTYN +++G   A  LT+A +L+ + ++ G+ P
Sbjct: 420 ELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISP 479

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  T+T LI+G CK   ++ A  LF+       +P +  YNTL+   C+   +E+A  L+
Sbjct: 480 NAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLF 539

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M +    P+ +S+ I+I+G    G V  A  L  EM+   + P  ++ + +I  + + 
Sbjct: 540 QEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKL 599

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A     +MVS G  PD++ +++L+ G+  +   +K  +++ +M ++ +V D    
Sbjct: 600 GQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLT 659

Query: 419 NVILTGFCRQGRMHDSELILWR 440
           + IL   C   +  D E IL +
Sbjct: 660 STILACLCNMSKDVDIEKILPK 681



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 212/427 (49%), Gaps = 39/427 (9%)

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
           P  ++ NTL+    + ++      +  +M+   V P   S S LI  F    +   A   
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLC 216
              +   G   +   + +++ G+C++G   +A+ +   M+++ C++ D V+YNT++NGLC
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFC-MMKRNCLIPDCVSYNTVINGLC 175

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
           + K L EA +LF EM      P+  TF+ LI G CK+G++ +   L + M +  ++ D+ 
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            Y+ LI GFC  G++E+  +L+ +M+ + ++PN ++Y  L+N  C      EA ++   M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
            G  ++P +V+   +  G  ++G AS A + L  MV  G +P++++YN +ING  +E  +
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFC------------------------------ 426
           D A  ++  M  +G  PDV+TY+ ++ G C                              
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFN 415

Query: 427 -------RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
                  +Q R+  ++ + + M+E+G   +  TY  LI+G++S   L +A     + +  
Sbjct: 416 LVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475

Query: 480 GFVPDDA 486
           G  P+ A
Sbjct: 476 GISPNAA 482



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 201/389 (51%), Gaps = 2/389 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + + L K+ +   A   L  M ++G  P+ VTYN +IN  C+EG +++A  ++ +M+ KG
Sbjct: 310 LADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKG 369

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML--QMGLSPDTATYNTLLVESCRKENMSE 118
            KP V TY++L+ GLC  G+ D A ++L+ ++  +  + PD   +N ++ E C++  +  
Sbjct: 370 KKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRH 429

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A+ ++  M  RG   +IV+++ LI  +   G+L +AL  +++   +G+ P+   YT++IN
Sbjct: 430 AKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLIN 489

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C+   +  A  + ++    G    V  YNT++  LCR   + +A +LF EM      P
Sbjct: 490 GLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDP 549

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  +F  +I G  K G++  A  L   M   ++ PD +T++ LI+ F K+G++++A  L+
Sbjct: 550 DVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLY 609

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+S    P+ + +  L+ GY   G   +   +  +M  K +       +TI+   C  
Sbjct: 610 ERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNM 669

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLI 387
                 ++ L K         SI  N L+
Sbjct: 670 SKDVDIEKILPKFSQHTSVGASIKCNELL 698


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  301 bits (770), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 161/486 (33%), Positives = 272/486 (55%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    +DSA     ++ + G++P+ VTY+ LI   C  G +E+A +L   M   G
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 430

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF  NSL+ G  K    + A ++ DE +  G++ +  TYN ++   C+   M EA 
Sbjct: 431 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEAC 489

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G+ P++VS++ +I    R G +D A   F +M +  L P+ V Y+I+I+G 
Sbjct: 490 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGN 549

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   +AL + D+ML         T+NTI+NGLC+   ++EA D     LE G  P  
Sbjct: 550 FKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSC 609

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++ G  K+GN++ AL ++  M +  + P++VTY +LI+GFCK   ++ A K   +
Sbjct: 610 MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDE 669

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + +  +  +Y  LI+G+C    +  A  L++E++  G+ P  +  N++I G+    +
Sbjct: 670 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 729

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A  +  KM+++ +  D  +Y TLI+G ++E  +  A  L  +M ++G+VPD+IT++V
Sbjct: 730 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 789

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C +G++ ++  IL  M  K + P    Y TLI G+  + NLKEAF  HDEML RG
Sbjct: 790 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 849

Query: 481 FVPDDA 486
            VPDD 
Sbjct: 850 LVPDDV 855



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 270/484 (55%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL + + I   +    +M  +G+Y D  T + ++ A  +EG +EEA +       +G
Sbjct: 231 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y+ +I  +CKK   +   E+L+EM + G  P  AT+ +++V    + NM EA 
Sbjct: 291 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEAL 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM   G   ++V  ++L+  +   G LD AL  F ++   GL P+ V Y+++I G 
Sbjct: 351 RLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + +A ++  +M   G    V   N++L G  +A +  EA  LF+E ++ GV  + 
Sbjct: 411 CNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANI 469

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  ++   CK G M++A +L D M  + + P++V+YN +I G C+ G M+ A+ +++D
Sbjct: 470 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSD 529

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++R + PN ++Y ILI+G    G   +A  L+ +M+   I PT  + NTII G C+ G 
Sbjct: 530 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 589

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A + L   + EG  P  ++YN++++GF++E N+D A A+  +M   G+ P+V+TY  
Sbjct: 590 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 649

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+  R+  +      M EKGL  D + Y+ LI+G   + +++ A     E+L+ G
Sbjct: 650 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 709

Query: 481 FVPD 484
             P+
Sbjct: 710 LSPN 713



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 140/389 (35%), Positives = 231/389 (59%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K+D A   L  M  +G+ P+ V+YN +I  +CR+G ++ A  + + M  + 
Sbjct: 475 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 534

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP V TY+ LI+G  KKG  ++A ++ D+ML + ++P   T+NT++   C+   MSEA 
Sbjct: 535 LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEAR 594

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +        G  P  +++++++  F + G +D AL  +REM   G+ P+ V YT +ING+
Sbjct: 595 DKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGF 654

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  +  ALK RDEM EKG  +DV  Y+ +++G C+ + +  A DLF E+LE G+ P+ 
Sbjct: 655 CKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNR 714

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + ++I G     NM  AL  +  M    I  D+ TY TLIDG  K G +  A+ L+ +
Sbjct: 715 IVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYME 774

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+ I P+ I++ +L+NG C+ G +  A ++  EM  K + P+++  NT+I GY R G+
Sbjct: 775 MLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGN 834

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLING 389
             +A     +M+  G+ PD ++Y+ LING
Sbjct: 835 LKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/510 (30%), Positives = 262/510 (51%), Gaps = 45/510 (8%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           DH I+ AK F  E++ +        +N L+NAY R   +E A    N+M  + + P V  
Sbjct: 175 DHLINCAKRFDFELDHR-------VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPY 227

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEAEEIFCEM 126
            N L+  L ++      +++ ++M+  G+  D  T + ++V +C KE  + EAEE F E 
Sbjct: 228 MNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVH-VMVRACLKEGRVEEAEEYFRET 286

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
             RGV  D  ++S +I    +    +  L    EMK  G VP    +T +I      G +
Sbjct: 287 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 346

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
           +EAL++++EM+  G  M++V   +++ G C    L  A +LFN++ E G+FP+  T++ L
Sbjct: 347 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 406

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKP--------------------------------- 273
           I G C  GN+ KA  L+  M    I P                                 
Sbjct: 407 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 466

Query: 274 -DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            +I TYN ++   CK G+M++A  L  +M+++ + PN +SY  +I G+C  G++  A  +
Sbjct: 467 ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 526

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + +M+ + +KP +V+ + +I G  + GD+ KA +   +M+S  + P   ++NT+ING  +
Sbjct: 527 FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK 586

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRS 451
              M +A   +     +G +P  +TYN I+ GF ++G + DS L ++R M E G++P+  
Sbjct: 587 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI-DSALAVYREMCEFGVSPNVV 645

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           TYT+LING    N +  A +  DEM ++G 
Sbjct: 646 TYTSLINGFCKSNRIDLALKTRDEMREKGL 675



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 143/252 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+   K+  IDSA     EM + GV P+ VTY +LIN +C+   ++ A +  + M  KG
Sbjct: 615 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 674

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  V  Y++LI+G CK+   + A+++  E+L++GLSP+   YN+++       NM  A 
Sbjct: 675 LELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAAL 734

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + +M    +  D+ +++TLI    + G+L  A   + EM S G+VPD + + +++NG 
Sbjct: 735 VWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGL 794

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A K+ +EM  K     V+ YNT++ G  R   L EA  L +EML+RG+ PD 
Sbjct: 795 CNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDD 854

Query: 241 YTFTTLIHGHCK 252
            T+  LI+G  K
Sbjct: 855 VTYDILINGKFK 866



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 50/80 (62%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LC   ++++A+  L EM++K + P  + YNTLI  Y REG L+EAF L + M  +G
Sbjct: 790 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 849

Query: 61  LKPGVFTYNSLINGLCKKGR 80
           L P   TY+ LING  K  R
Sbjct: 850 LVPDDVTYDILINGKFKGDR 869



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%)

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N ++  Y R+     A +  + M+ + V P     N L+   VR   + +   L +KM  
Sbjct: 194 NYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVL 253

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+  D  T +V++    ++GR+ ++E       E+G+  D   Y+ +I     + N   
Sbjct: 254 RGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNL 313

Query: 469 AFRFHDEMLQRGFVPDDA 486
                +EM +RG+VP +A
Sbjct: 314 GLELLEEMKERGWVPSEA 331


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  300 bits (769), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 150/448 (33%), Positives = 258/448 (57%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N  C+  ++D     L ++ + G+ P  VT+ TLIN  C+ G   +A +L + M  KG 
Sbjct: 135 MNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGC 194

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P V+TYN++INGLCK G    A  +L +M + G  P+  TY+TL+   CR   ++EA +
Sbjct: 195 QPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALD 254

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           IF  M  +G++PDI ++++LI    +  +   A     EM S  ++PD V + ++++ +C
Sbjct: 255 IFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFC 314

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G V EAL +   M E G   +VVTY++++ G      + EA  LF+ M+ +G  P+ +
Sbjct: 315 KEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIF 374

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           ++  LI+G+CK   +++A+ LF+ M  + + P+ V+YNTLI GFC++G++ +A  L+ +M
Sbjct: 375 SYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNM 434

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            +    P+  +Y IL++G+C  G++ +AFRL+  M    +KP LV    ++   C+SG+ 
Sbjct: 435 CTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNH 494

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A +  S++  +G+ P    Y T+ING  +E  +D+A      ME  G  PD I+YNVI
Sbjct: 495 KDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVI 554

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPD 449
           + G  +      + L++  M ++G   D
Sbjct: 555 IRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 151/476 (31%), Positives = 255/476 (53%), Gaps = 1/476 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG-FLEEAFQLMNSMSGKGLKPGVFTYN 69
           ID A      M  +   P  + +  L++A  + G + +    L   M   GL P ++T +
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
             +N  C+  R D    VL +++++GL P   T+ TL+   C+    ++A E+F +M  +
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  PD+ +++T+I    + G+   A    ++M+ AG  P+ V Y+ +I+  CR+  V EA
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           L +   M  KG   D+ TY +++ GLC+     EA  L NEM    + PD  TF  L+  
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK+G +++AL +   MT+  ++P++VTY++L+ G+    ++ +A KL+  MI++   PN
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             SY ILINGYC    + EA +L+ EM+ +G+ P  VS NT+I G+C+ G   +A +   
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M + G  PD  +Y+ L++GF ++  + KAF L   M++  L P+++ Y +++   C+ G
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
              D+  +   +  +GL P    YTT+ING   +  L EA      M   G  PD+
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDE 548



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 251/465 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME  G+ P+  T +  +N +C+   ++  F ++  +   GL+P + T+ +LINGLCK G
Sbjct: 118 QMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVG 177

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +A E+ D+M+  G  PD  TYNT++   C+    + A  +  +M   G  P++V++S
Sbjct: 178 EFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYS 237

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TLI    R+  ++ AL  F  MK+ G+ PD   YT +I G C+     EA  + +EM   
Sbjct: 238 TLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL 297

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + D+VT+N +++  C+   ++EA  +   M E GV P+  T+++L++G+    ++ +A
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             LF +M  K  KP+I +YN LI+G+CK   +++A +L+ +MI + ++PN +SY  LI+G
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C +G + EA  L+  M   G  P L + + ++ G+C+ G   KA      M S  + P+
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            + Y  L++   +  N   A  L S++  QGL P V  Y  I+ G C++G + ++     
Sbjct: 478 LVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFR 537

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   G  PD  +Y  +I G +   +   A     EM  RGF+ D
Sbjct: 538 NMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 199/384 (51%), Gaps = 39/384 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +  +A   L +ME+ G  P+ VTY+TLI++ CR+  + EA  + + M  KG
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +FTY SLI GLCK  R   A  +L+EM  + + PD  T+N L+   C++  +SEA 
Sbjct: 264 ISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAL 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+  GV P++V++S+L+  +S    +  A   F  M + G  P+   Y I+INGY
Sbjct: 324 GVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGY 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA+++ +EM+ +G   + V+YNT+++G C+   L EA DLF  M   G  PD 
Sbjct: 384 CKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDL 443

Query: 241 YTF-----------------------------------TTLIHGHCKDGNMNKALNLFDI 265
           +T+                                   T L+H  CK GN   A  LF  
Sbjct: 444 FTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSE 503

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +  + ++P +  Y T+I+G CK G +++A + + +M +    P+ ISY ++I G      
Sbjct: 504 LFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKD 563

Query: 326 VTEAFRLWYEMVGKG----IKPTL 345
            + A  L  EM  +G    ++P L
Sbjct: 564 ESRALLLVGEMRDRGFIADVRPCL 587


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  300 bits (769), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 157/496 (31%), Positives = 269/496 (54%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G++PD VT+ TL++  C E  + EA  L + M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T+ +L+NGLC++GR   A  +LD M++ GL P   TY T++   C+K +   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 121 EIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M     + P++V +S +I    ++G+   A   F EM+  G+ PD   Y  +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   +A ++  EMLE+    DVVTYN ++N   +     EA++L++EML RG+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++++I G CK   ++ A ++F +M  K   P+++T+NTLIDG+C    ++   +L  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    +  +  +Y  LI+G+  +G +  A  L  EM+  G+ P +V+C+T++ G C +G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 360 DASKADEFLSKMVSE-----------GVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
               A E    M              GV+PD  +YN LI+G + E    +A  L  +M +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+VPD ITY+ ++ G C+Q R+ ++  +   M  K  +P+  T+TTLING+     + +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 469 AFRFHDEMLQRGFVPD 484
                 EM +RG V +
Sbjct: 600 GLELFCEMGRRGIVAN 615



 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 152/470 (32%), Positives = 256/470 (54%), Gaps = 14/470 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  L+    R    +    L   M  K ++  ++++N LI   C   +   A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++ ++GL PD  T+ TLL   C ++ +SEA  +F +M      P++V+F+TL+    R
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVV 206
            G++  A+     M   GL P  + Y  I++G C+ G  + AL +  +M E   ++ +VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            Y+ I++ LC+    ++A +LF EM E+G+FPD +T+ ++I G C  G  + A  L   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ I PD+VTYN LI+ F K G+  +A +L+ +M+ R I PN I+Y  +I+G+C    +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  ++Y M  KG  P L++ NT+I GYC +       E L +M   G+  D+ +YNTL
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-- 444
           I+GF    +++ A  L+ +M + GL PD++T + +L G C  G++ D+ L ++++++K  
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA-LEMFKVMQKSK 495

Query: 445 ----------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                     G+ PD  TY  LI+G +++    EA   ++EM  RG VPD
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 264/481 (54%), Gaps = 12/481 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++N LC++ +I  A   L  M + G+ P  +TY T+++  C++G    A  L+  M    
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P V  Y+++I+ LCK GR   A+ +  EM + G+ PD  TYN+++V  C     S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E++  EM  R ++PD+V+++ LI  F + G+   A   + EM   G++P+ + Y+ +I+G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +  A  M   M  KGC  +++T+NT+++G C AK + +  +L +EM E G+  D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIHG    G++N AL+L   M    + PDIVT +TL+DG C  G+++ A +++ 
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+  +Y ILI+G  + G   EA  L+ EM  +GI P  ++ 
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G C+     +A +    M S+   P+ +++ TLING+ +   +D    L  +M  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V + ITY  ++ GF + G ++ +  I   MI  G+ PD  T   ++ G  S+  LK 
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 469 A 469
           A
Sbjct: 670 A 670



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 266/496 (53%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC + ++  A     +M +    P+ VT+ TL+N  CREG + EA  L++ M   G
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG 214

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
           L+P   TY ++++G+CKKG    A  +L +M ++  + P+   Y+ ++   C+    S+A
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +F EM  +G+ PD+ +++++I  F  +G+   A    +EM    + PD V Y  +IN 
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + + G   EA ++ DEML +G + + +TY+++++G C+   L  A+ +F  M  +G  P+
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF TLI G+C    ++  + L   MT+  +  D  TYNTLI GF  VG++  A  L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-----------GIKPTLVSC 348
           +MIS  + P+ ++   L++G C  G + +A  ++  M              G++P + + 
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I G    G   +A+E   +M   G+ PD+I+Y+++I+G  ++  +D+A  +   M +
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +   P+V+T+  ++ G+C+ GR+ D   +   M  +G+  +  TY TLI G     N+  
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNING 634

Query: 469 AFRFHDEMLQRGFVPD 484
           A     EM+  G  PD
Sbjct: 635 ALDIFQEMISSGVYPD 650



 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 139/418 (33%), Positives = 241/418 (57%), Gaps = 11/418 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCKD +   A+    EM++KG++PD  TYN++I  +C  G   +A QL+  M  + 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LIN   K+G+   A+E+ DEML  G+ P+T TY++++   C++  +  AE
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+ +G +P++++F+TLI  +    ++D  +    EM   GLV D   Y  +I+G+
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
              G +  AL +  EM+  G   D+VT +T+L+GLC    L +A ++F  M +       
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 235 -----GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                GV PD  T+  LI G   +G   +A  L++ M  + I PD +TY+++IDG CK  
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A +++  M S+  SPN +++  LINGYC  G V +   L+ EM  +GI    ++  
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           T+I G+ + G+ + A +   +M+S GV PD+I+   ++ G   +E + +A A++ K++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 209/372 (56%), Gaps = 1/372 (0%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +A ++F +M R    P +V F  L+G+  R  + D  +  +++M+   +  D   +
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            I+I  +C    +  AL    ++ + G   DVVT+ T+L+GLC    ++EA +LF++M E
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
               P+  TFTTL++G C++G + +A+ L D M +  ++P  +TY T++DG CK G+   
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 294 ANKLWADMIS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           A  L   M     I PN + Y  +I+  C  G  ++A  L+ EM  KGI P L + N++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G+C SG  S A++ L +M+   + PD ++YN LIN FV+E    +A  L  +M  +G++
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+ ITY+ ++ GFC+Q R+  +E + + M  KG +P+  T+ TLI+G+     + +    
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 473 HDEMLQRGFVPD 484
             EM + G V D
Sbjct: 418 LHEMTETGLVAD 429



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 158/340 (46%), Gaps = 55/340 (16%)

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  GF  E+LK++                   +G    K L +A DLF++ML     P  
Sbjct: 39  CEAGFGGESLKLQ-------------------SGFHEIKGLEDAIDLFSDMLRSRPLPSV 79

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  L+    +    +  ++L+  M +K I+ DI ++N LI  FC   ++  A   +  
Sbjct: 80  VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGK 139

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+ +++  L++G C    V+EA  L+++M     +P +V+  T++ G CR G 
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME------------- 407
             +A   L +M+ +G+ P  I+Y T+++G  ++ +   A  L+ KME             
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 408 -----------------------NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
                                   +G+ PD+ TYN ++ GFC  GR  D+E +L  M+E+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++PD  TY  LIN  V +    EA   +DEML RG +P+
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  300 bits (769), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 157/496 (31%), Positives = 270/496 (54%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G++PD VT+NTL++  C E  + EA  L + M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T+ +L+NGLC++GR   A  +LD M++ GL P   TY T++   C+  +   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 121 EIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++  +M     + P++V +S +I    ++G+   A   F EM+  G+ PD   Y  +I G
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   +A ++  EMLE+    DVVTYN ++N   +     EA++L++EML RG+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++++I G CK   ++ A ++F +M  K   P+++T+NTLIDG+C    ++   +L  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    +  +  +Y  LI+G+  +G +  A  L  EM+  G+ P +V+C+T++ G C +G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 360 DASKADEFLSKMVSE-----------GVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
               A E    M              GV+PD  +YN LI+G + E    +A  L  +M +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+VPD ITY+ ++ G C+Q R+ ++  +   M  K  +P+  T+TTLING+     + +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 469 AFRFHDEMLQRGFVPD 484
                 EM +RG V +
Sbjct: 600 GLELFCEMGRRGIVAN 615



 Score =  287 bits (734), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 152/470 (32%), Positives = 256/470 (54%), Gaps = 14/470 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  L+    R    +    L   M  K ++  ++++  LI   C   +   A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++ ++GL PD  T+NTLL   C ++ +SEA  +F +M      P++V+F+TL+    R
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVV 206
            G++  A+     M   GL P  + Y  I++G C+ G  + AL +  +M E   ++ +VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVV 256

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            Y+ I++ LC+    ++A +LF EM E+G+FPD +T+ ++I G C  G  + A  L   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ I PD+VTYN LI+ F K G+  +A +L+ +M+ R I PN I+Y  +I+G+C    +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  ++Y M  KG  P L++ NT+I GYC +       E L +M   G+  D+ +YNTL
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-- 444
           I+GF    +++ A  L+ +M + GL PD++T + +L G C  G++ D+ L ++++++K  
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA-LEMFKVMQKSK 495

Query: 445 ----------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                     G+ PD  TY  LI+G +++    EA   ++EM  RG VPD
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545



 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 263/481 (54%), Gaps = 12/481 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++N LC++ +I  A   L  M + G+ P  +TY T+++  C+ G    A  L+  M    
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEIS 249

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P V  Y+++I+ LCK GR   A+ +  EM + G+ PD  TYN+++V  C     S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E++  EM  R ++PD+V+++ LI  F + G+   A   + EM   G++P+ + Y+ +I+G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +  A  M   M  KGC  +++T+NT+++G C AK + +  +L +EM E G+  D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIHG    G++N AL+L   M    + PDIVT +TL+DG C  G+++ A +++ 
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+  +Y ILI+G  + G   EA  L+ EM  +GI P  ++ 
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G C+     +A +    M S+   P+ +++ TLING+ +   +D    L  +M  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V + ITY  ++ GF + G ++ +  I   MI  G+ PD  T   ++ G  S+  LK 
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 469 A 469
           A
Sbjct: 670 A 670



 Score =  274 bits (700), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 139/418 (33%), Positives = 241/418 (57%), Gaps = 11/418 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCKD +   A+    EM++KG++PD  TYN++I  +C  G   +A QL+  M  + 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LIN   K+G+   A+E+ DEML  G+ P+T TY++++   C++  +  AE
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+ +G +P++++F+TLI  +    ++D  +    EM   GLV D   Y  +I+G+
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
              G +  AL +  EM+  G   D+VT +T+L+GLC    L +A ++F  M +       
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 235 -----GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                GV PD  T+  LI G   +G   +A  L++ M  + I PD +TY+++IDG CK  
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A +++  M S+  SPN +++  LINGYC  G V +   L+ EM  +GI    ++  
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           T+I G+ + G+ + A +   +M+S GV PD+I+   ++ G   +E + +A A++ K++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/373 (34%), Positives = 214/373 (57%), Gaps = 3/373 (0%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +A ++F +M R    P +V F  L+G+  R  + D  +  +++M+   +  D   +
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           TI+I  +C    +  AL    ++ + G   DVVT+NT+L+GLC    ++EA +LF++M E
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
               P+  TFTTL++G C++G + +A+ L D M +  ++P  +TY T++DG CK+G+   
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVS 237

Query: 294 ANKLWADM--ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           A  L   M  IS  I PN + Y  +I+  C  G  ++A  L+ EM  KGI P L + N++
Sbjct: 238 ALDLLRKMEEISH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I G+C SG  S A++ L +M+   + PD ++YN LIN FV+E    +A  L  +M  +G+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           +P+ ITY+ ++ GFC+Q R+  +E + + M  KG +P+  T+ TLI+G+     + +   
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 472 FHDEMLQRGFVPD 484
              EM + G V D
Sbjct: 417 LLHEMTETGLVAD 429



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 55/340 (16%)

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  GF  E+LK++                   +G    K L +A DLF++ML     P  
Sbjct: 39  CEAGFGGESLKLQ-------------------SGFHEIKGLEDAIDLFSDMLRSRPLPSV 79

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  L+    +    +  ++L+  M +K I+ DI ++  LI  FC   ++  A   +  
Sbjct: 80  VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGK 139

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+ +++  L++G C    V+EA  L+++M     +P +V+  T++ G CR G 
Sbjct: 140 ITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME------------- 407
             +A   L +M+ +G+ P  I+Y T+++G  +  +   A  L+ KME             
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYS 259

Query: 408 -----------------------NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
                                   +G+ PD+ TYN ++ GFC  GR  D+E +L  M+E+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++PD  TY  LIN  V +    EA   +DEML RG +P+
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  300 bits (767), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 160/484 (33%), Positives = 266/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K +K D        M+   +  D  +YN LIN +CR   L  A  ++  M   G
Sbjct: 70  LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 129

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M  M   P+T T+NTL+         SEA 
Sbjct: 130 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 189

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  RG  PD+ ++ T++    + G +D AL   ++M+   +  D V+YT II+  
Sbjct: 190 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 249

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V +AL +  EM  KG   +VVTYN+++  LC     ++A  L ++M+ER + P+ 
Sbjct: 250 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 309

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ LI    K+G + +A  L+D M ++SI PDI TY++LI+GFC    +++A  ++  
Sbjct: 310 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 369

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS+   PN ++Y  LI G+C    V E   L+ EM  +G+    V+ NT+I+G  ++GD
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 429

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   KMVS+GV PD I+Y+ L++G  +   ++KA  +   ++   + PD+ TYN+
Sbjct: 430 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 489

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ P+   YTT+I+G   +   +EA     EM + G
Sbjct: 490 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 549

Query: 481 FVPD 484
            +P+
Sbjct: 550 TLPN 553



 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 260/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++  A   L +M + G  PD VT ++L+N YC    + EA  L++ M    
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+N+LI+GL    +   A  ++D M+  G  PD  TY T++   C++ ++  A 
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +  +  D+V ++T+I        ++ AL  F EM + G+ P+ V Y  +I   
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++  +M+E+    +VVT++ +++   +   L EA+ L++EM++R + PD 
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI+G C    +++A ++F++M  K   P++VTYNTLI GFCK   +E+  +L+ +
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 404

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  N ++Y  LI G    G    A +++ +MV  G+ P +++ + ++ G C+ G 
Sbjct: 405 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 464

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA      +    ++PD  +YN +I G  +   ++  + L   +  +G+ P+VI Y  
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 524

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++GFCR+G   +++ +   M E G  P+  TY TLI   +   +   +     EM   G
Sbjct: 525 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 584

Query: 481 FVPD 484
           FV D
Sbjct: 585 FVGD 588



 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 252/458 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I  A   + +M      P+TVT+NTLI+         EA  L++ M  +G
Sbjct: 140 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 199

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P +FTY +++NGLCK+G  D A  +L +M +  +  D   Y T++   C  +N+++A 
Sbjct: 200 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 259

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+ P++V++++LI      G+   A     +M    + P+ V ++ +I+ +
Sbjct: 260 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 319

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G ++EA K+ DEM+++    D+ TY++++NG C    L EA  +F  M+ +  FP+ 
Sbjct: 320 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 379

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G CK   + + + LF  M+Q+ +  + VTYNTLI G  + G+ + A K++  
Sbjct: 380 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 439

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ I+Y IL++G C  G + +A  ++  +    ++P + + N +I+G C++G 
Sbjct: 440 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                +    +  +GV P+ I Y T+I+GF R+   ++A AL  +M+  G +P+  TYN 
Sbjct: 500 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 559

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++    R G    S  ++  M   G   D ST + +IN
Sbjct: 560 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 597



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 117/215 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +++       EM Q+G+  +TVTYNTLI    + G  + A ++   M   G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY+ L++GLCK G+ ++A  V + + +  + PD  TYN ++   C+   + +  
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 504

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++FC +S +GV P+++ ++T+I  F R G  + A   FREMK  G +P++  Y  +I   
Sbjct: 505 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 564

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            R+G    + ++  EM   G V D  T + ++N L
Sbjct: 565 LRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  300 bits (767), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 160/484 (33%), Positives = 266/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K +K D        M+   +  D  +YN LIN +CR   L  A  ++  M   G
Sbjct: 86  LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 145

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M  M   P+T T+NTL+         SEA 
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  RG  PD+ ++ T++    + G +D AL   ++M+   +  D V+YT II+  
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V +AL +  EM  KG   +VVTYN+++  LC     ++A  L ++M+ER + P+ 
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ LI    K+G + +A  L+D M ++SI PDI TY++LI+GFC    +++A  ++  
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS+   PN ++Y  LI G+C    V E   L+ EM  +G+    V+ NT+I+G  ++GD
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   KMVS+GV PD I+Y+ L++G  +   ++KA  +   ++   + PD+ TYN+
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ P+   YTT+I+G   +   +EA     EM + G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565

Query: 481 FVPD 484
            +P+
Sbjct: 566 TLPN 569



 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 260/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++  A   L +M + G  PD VT ++L+N YC    + EA  L++ M    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+N+LI+GL    +   A  ++D M+  G  PD  TY T++   C++ ++  A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +  +  D+V ++T+I        ++ AL  F EM + G+ P+ V Y  +I   
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++  +M+E+    +VVT++ +++   +   L EA+ L++EM++R + PD 
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI+G C    +++A ++F++M  K   P++VTYNTLI GFCK   +E+  +L+ +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  N ++Y  LI G    G    A +++ +MV  G+ P +++ + ++ G C+ G 
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA      +    ++PD  +YN +I G  +   ++  + L   +  +G+ P+VI Y  
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++GFCR+G   +++ +   M E G  P+  TY TLI   +   +   +     EM   G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600

Query: 481 FVPD 484
           FV D
Sbjct: 601 FVGD 604



 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 252/458 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I  A   + +M      P+TVT+NTLI+         EA  L++ M  +G
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P +FTY +++NGLCK+G  D A  +L +M +  +  D   Y T++   C  +N+++A 
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+ P++V++++LI      G+   A     +M    + P+ V ++ +I+ +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G ++EA K+ DEM+++    D+ TY++++NG C    L EA  +F  M+ +  FP+ 
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G CK   + + + LF  M+Q+ +  + VTYNTLI G  + G+ + A K++  
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ I+Y IL++G C  G + +A  ++  +    ++P + + N +I+G C++G 
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                +    +  +GV P+ I Y T+I+GF R+   ++A AL  +M+  G +P+  TYN 
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++    R G    S  ++  M   G   D ST + +IN
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 117/215 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +++       EM Q+G+  +TVTYNTLI    + G  + A ++   M   G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY+ L++GLCK G+ ++A  V + + +  + PD  TYN ++   C+   + +  
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++FC +S +GV P+++ ++T+I  F R G  + A   FREMK  G +P++  Y  +I   
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            R+G    + ++  EM   G V D  T + ++N L
Sbjct: 581 LRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 162/471 (34%), Positives = 265/471 (56%), Gaps = 1/471 (0%)

Query: 11  IDSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           +D+  + L +++   G+  DTV YN L+N       ++    + + M  +G+KP V T+N
Sbjct: 130 VDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFN 189

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +L+  LC+  +   A  +L+EM   G++PD  T+ TL+     + ++  A  +   M   
Sbjct: 190 TLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEM 249

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G +P  V+ + LI  + + G+++ AL Y ++  + G  PD + Y   +NG C+NG V  A
Sbjct: 250 GCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHA 309

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           LK+ D M+++G   DV TYN ++N LC+   L EA  + N+M+ERG  PD  TF TLI  
Sbjct: 310 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVA 369

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C    + +AL+L   +T K + PD+ T+N LI+  CKVG+ + A +L+ +M S   +P+
Sbjct: 370 LCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD 429

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y  LI+  CS+G + +A  L  EM   G   + V+ NTII G C+     +A+E   
Sbjct: 430 EVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFD 489

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M  +G+  ++I++NTLI+G  +++ +D A  L+S+M ++GL P+ ITYN ILT +C+QG
Sbjct: 490 QMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQG 549

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  +  IL  M   G   D  TY TLING       + A +    M  +G
Sbjct: 550 DIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600



 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 158/487 (32%), Positives = 260/487 (53%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K+   +    EM ++G+ PD VT+NTL+ A CR   +  A  ++  MS  G
Sbjct: 156 LLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSG 215

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ G  ++G    A  V   ML+MG SP   T N L+   C+   + +A 
Sbjct: 216 VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +    G  PD ++++T +    +NG +  AL     M   G  PD   Y I++N  
Sbjct: 276 GYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 335

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG + EA  + ++M+E+GC+ D+ T+NT++  LC    L EA DL  ++  +G+ PD 
Sbjct: 336 CKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDV 395

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF  LI+  CK G+   AL LF+ M      PD VTYNTLID  C +G++ KA  L  +
Sbjct: 396 YTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKE 455

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S     + ++Y  +I+G C    + EA  ++ +M  +GI    ++ NT+I G C+   
Sbjct: 456 MESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKR 515

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A++ +S+M+SEG+ P++I+YN+++  + ++ ++ KA  ++  M   G   DV+TY  
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ GR   +  +L  M  KG+      Y  +I     +NN ++A     EM + G
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVG 635

Query: 481 FVPDDAF 487
             P DAF
Sbjct: 636 -EPPDAF 641



 Score =  284 bits (726), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 163/495 (32%), Positives = 245/495 (49%), Gaps = 36/495 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPD------------------------------- 29
           ++ ALC+ H++ +A + L EM   GV PD                               
Sbjct: 191 LMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMG 250

Query: 30  ----TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                VT N LIN YC+ G +E+A   +      G +P   TYN+ +NGLC+ G    A 
Sbjct: 251 CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHAL 310

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +V+D M+Q G  PD  TYN ++   C+   + EA+ I  +M  RG  PDI +F+TLI   
Sbjct: 311 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVAL 370

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
               +L+ AL   R++   GL PD   + I+IN  C+ G    AL++ +EM   GC  D 
Sbjct: 371 CSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDE 430

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYNT+++ LC    L +A DL  EM   G      T+ T+I G CK   + +A  +FD 
Sbjct: 431 VTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQ 490

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  + I  + +T+NTLIDG CK   ++ AN+L + MIS  + PN I+Y  ++  YC  G 
Sbjct: 491 MDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGD 550

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +A  +   M   G +  +V+  T+I G C++G    A + L  M  +G+     +YN 
Sbjct: 551 IKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNP 610

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR-QGRMHDSELILWRMIEK 444
           +I    R  N   A  L  +M   G  PD  TY ++  G CR  G + ++   L  M++K
Sbjct: 611 VIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDK 670

Query: 445 GLNPDRSTYTTLING 459
           G  P+ S++  L  G
Sbjct: 671 GFIPEFSSFRMLAEG 685



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 140/430 (32%), Positives = 241/430 (56%), Gaps = 1/430 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +++ A  ++ +    G  PD +TYNT +N  C+ G +  A ++M+ M  +G
Sbjct: 261 LINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEG 320

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTYN ++N LCK G+ + AK +L++M++ G  PD  T+NTL+V  C    + EA 
Sbjct: 321 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEAL 380

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +++ +G++PD+ +F+ LI    + G    AL  F EMKS+G  PD V Y  +I+  
Sbjct: 381 DLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNL 440

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +AL +  EM   GC    VTYNTI++GLC+   + EA+++F++M  +G+  + 
Sbjct: 441 CSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 500

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI G CKD  ++ A  L   M  + ++P+ +TYN+++  +CK G+++KA  +   
Sbjct: 501 ITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQT 560

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +     + ++YG LING C  G    A +L   M  KG++ T  + N +I+   R  +
Sbjct: 561 MTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNN 620

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREE-NMDKAFALVSKMENQGLVPDVITYN 419
              A     +M   G  PD+ +Y  +  G  R   ++ +AF  + +M ++G +P+  ++ 
Sbjct: 621 TRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFR 680

Query: 420 VILTGFCRQG 429
           ++  G    G
Sbjct: 681 MLAEGLLNLG 690



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 210/391 (53%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G+  DT  YN LL        M   E ++ EM  RG+ PD+V+F+TL+    R  Q+  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
           ++   EM S+G+ PD   +T ++ G+   G +  AL+++  MLE GC    VT N ++NG
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
            C+   + +A     + +  G  PD  T+ T ++G C++G++  AL + D+M Q+   PD
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
           + TYN +++  CK G++E+A  +   M+ R   P+  ++  LI   CS   + EA  L  
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           ++  KG+ P + + N +I   C+ GD   A     +M S G  PD ++YNTLI+      
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            + KA  L+ +ME+ G     +TYN I+ G C++ R+ ++E +  +M  +G++ +  T+ 
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 504

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           TLI+G      + +A +   +M+  G  P++
Sbjct: 505 TLIDGLCKDKRIDDANQLISQMISEGLQPNN 535



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 142/271 (52%), Gaps = 1/271 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   K+  A   L EME  G    TVTYNT+I+  C++  +EEA ++ + M  +G
Sbjct: 436 LIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG 495

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     T+N+LI+GLCK  R D A +++ +M+  GL P+  TYN++L   C++ ++ +A 
Sbjct: 496 ISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAA 555

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M+  G   D+V++ TLI    + G+   AL   R M+  G+      Y  +I   
Sbjct: 556 DILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSL 615

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGVFPD 239
            R     +A+ +  EM E G   D  TY  +  GLCR    + EA D   EM+++G  P+
Sbjct: 616 FRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPE 675

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           F +F  L  G    G  +  +   +I+ +K+
Sbjct: 676 FSSFRMLAEGLLNLGMDDYFIRAIEIIIEKA 706


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 264/483 (54%), Gaps = 2/483 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYP--DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
            LC+D ++D A      M + G     D V +N+L++ YC+ G +E AF +   M  +G+
Sbjct: 146 GLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGV 205

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
              V  YNSL+ GLC+ G  D A++++D M + G+ P+  TY   +VE CR+  + +A  
Sbjct: 206 GVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFS 265

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           ++ EM R+GV PD+V+ S L+G   ++G+   A   FREM+  G  P++V Y ++I+   
Sbjct: 266 LYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLA 325

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           +     E+L +  E++ +G VMD++ Y  +++ LC+   + EA D+F   L     P+  
Sbjct: 326 KAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGV 385

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+T LI   CK GN++ A  +   M +KSI P++VT++++I+G  K G + KA     +M
Sbjct: 386 TYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREM 445

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R I PN ++YG +I+G         A  +++EM+ +G++      ++++ G  ++G  
Sbjct: 446 KERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKI 505

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            KA+    +M   GV  D ++Y TLI+G  +  N+  AF +  ++  + L+PD + YNV 
Sbjct: 506 EKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVF 565

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +   C  G+  ++E  L  M   GL PD+ TY T+I     +    +A +  + M +   
Sbjct: 566 INCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSI 625

Query: 482 VPD 484
            P+
Sbjct: 626 KPN 628



 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 251/486 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCKD +   A     EME+ G  P+ VTY  LI+   +     E+  L+  +  +G
Sbjct: 285 LVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRG 344

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   +  Y +L++ LCK+G+ D AK++    L    +P+  TY  L+   C+  N+  AE
Sbjct: 345 VVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAE 404

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  + ++P++V+FS++I    + G + +A  Y REMK  G+ P+ V Y  +I+G 
Sbjct: 405 QVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGS 464

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      AL +  EML +G  ++    ++++NGL +   + +A+ LF EM ERGV  D 
Sbjct: 465 FKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDH 524

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TTLI G  K GN+  A  +   +T+K++ PD V YN  I+  C +G+ ++A     +
Sbjct: 525 VNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEE 584

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  + P+ ++Y  +I      G   +A +L   M    IKP L++ +T+I G   +G 
Sbjct: 585 MQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGA 644

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L++M S G  P S+++  ++    +    D    +   M N GL  D+  YN 
Sbjct: 645 VEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNT 704

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C  G    + ++L  M  +G+ PD  T+  LI GH    +L  AF  +D+ML  G
Sbjct: 705 LVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHG 764

Query: 481 FVPDDA 486
             P+ A
Sbjct: 765 ISPNVA 770



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 233/439 (53%), Gaps = 2/439 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L K+ KI+ A+    EM ++GV  D V Y TLI+   + G L  AF++   ++ K 
Sbjct: 495 LVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKN 554

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    YN  IN LC  G+   A+  L+EM   GL PD  TYNT++    R+   ++A 
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M R  + P+++++STLI      G +++A     EM S+G  P ++ +  ++   
Sbjct: 615 KLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA- 673

Query: 181 CRNGFVLE-ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C  G   +  L++ + M+  G   D+  YNT++  LC   M  +A  +  EM  RG+ PD
Sbjct: 674 CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPD 733

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF  LI GH K G+++ A + +D M    I P++ T+NTL+ G    G + +++ +  
Sbjct: 734 TITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLN 793

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R I P+ ++Y IL+ GY    +  EA RL+ EMVGKG  P + + N +I  + + G
Sbjct: 794 EMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVG 853

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S+A E  ++M + GV P S +Y+ L++G+ +  N  +    +  M+ +G  P   T +
Sbjct: 854 MMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLS 913

Query: 420 VILTGFCRQGRMHDSELIL 438
            I   F + G   ++  +L
Sbjct: 914 SISRAFSKPGMSWEARRLL 932



 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 256/518 (49%), Gaps = 35/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK   +D A+  L EME+K + P+ VT++++IN   + G++ +A   M  M  +G
Sbjct: 390 LIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449

Query: 61  LKPGVFTY-----------------------------------NSLINGLCKKGRCDRAK 85
           + P V TY                                   +SL+NGL K G+ ++A+
Sbjct: 450 IDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAE 509

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  EM + G+  D   Y TL+    +  N+  A ++  E++ + + PD V ++  I   
Sbjct: 510 ALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCL 569

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+   A  +  EM+S GL PD V Y  +I    R G   +ALK+ + M       ++
Sbjct: 570 CMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNL 629

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TY+T++ GL  A  + +A  L NEM   G  P   T   ++    +    +  L + + 
Sbjct: 630 ITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEW 689

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    +  DI  YNTL+   C  G   KA  +  +M  R I+P+ I++  LI G+   GH
Sbjct: 690 MMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGH 749

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  AF  + +M+  GI P + + NT++ G   +G   ++D  L++M   G++P +++Y+ 
Sbjct: 750 LDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDI 809

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+ G+ ++ N  +A  L  +M  +G +P V TYN +++ F + G M  ++ +   M  +G
Sbjct: 810 LVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRG 869

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           + P   TY  L++G     N  E  +F  +M ++GF P
Sbjct: 870 VLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSP 907



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 247/458 (53%), Gaps = 3/458 (0%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           DTV+YN +++ +  +G L     L+  M  +G+     T N+++ GLC+ GR DRA  + 
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 89  DEMLQMG--LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           + M++ G     D   +N+L+   C+  +M  A  +   M  +GV  D+V +++L+    
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           R G++D A      MK  G+ P+ V YT+ I  YCR   V +A  + +EM+ KG + DVV
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T + ++ GLC+    +EA  LF EM + G  P+  T+  LI    K    N++L+L   +
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             + +  D++ Y  L+D  CK G++++A  ++   +S   +PN ++Y +LI+  C  G+V
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A ++  EM  K I P +V+ ++II G  + G   KA +++ +M   G+DP+ ++Y T+
Sbjct: 401 DGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTV 460

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G  +    + A  +  +M  +G+  +    + ++ G  + G++  +E +   M E+G+
Sbjct: 461 IDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGV 520

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             D   YTTLI+G     NL  AF+   E+ ++  +PD
Sbjct: 521 LLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPD 558



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 206/371 (55%), Gaps = 2/371 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N LC   K   A+ FL EM+  G+ PD VTYNT+I A  REG   +A +L+N M    +
Sbjct: 566 INCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSI 625

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-AE 120
           KP + TY++LI GL + G  ++AK +L+EM   G SP + T+  +L ++C +   S+   
Sbjct: 626 KPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVL-QACSQGRRSDLIL 684

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI   M   G+  DI  ++TL+ +   NG   +A++   EM   G+ PD + +  +I G+
Sbjct: 685 EIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGH 744

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G +  A    D+ML  G   +V T+NT+L GL  A  + E+D + NEM +RG+ P  
Sbjct: 745 FKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSN 804

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L+ G+ K  N  +A+ L+  M  K   P + TYN LI  F KVG M +A +L+ +
Sbjct: 805 LTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNE 864

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +R + P   +Y IL++G+  + + TE  +   +M  KG  P+  + ++I + + + G 
Sbjct: 865 MQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGM 924

Query: 361 ASKADEFLSKM 371
           + +A   L  +
Sbjct: 925 SWEARRLLKNL 935



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 175/370 (47%), Gaps = 73/370 (19%)

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
           L +L+    +L     +D V+YN +++G      L   + L  EM +RGV  D  T  T+
Sbjct: 85  LRSLRPALALLRSSESVDTVSYNVVMSGFSEQGGLA-PEALLAEMCKRGVPFDAVTVNTV 143

Query: 247 IHGHCKDGNMNKALNLFDIMTQKS--IKPDIVTYNTLIDGFCKVGEMEKA---------- 294
           + G C+DG +++A  L ++M +       D+V +N+L+DG+CKVG+ME A          
Sbjct: 144 LVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQ 203

Query: 295 ---------NKLWA------------DMISR----KISPNYISYGILINGYCSMGHVTEA 329
                    N L A            DM+       + PN ++Y + I  YC    V +A
Sbjct: 204 GVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDA 263

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
           F L+ EMV KG+ P +V+ + ++ G C+ G  S+A     +M   G  P+ ++Y  LI+ 
Sbjct: 264 FSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDT 323

Query: 390 FVREENMDKAFALVSKMENQGLV-----------------------------------PD 414
             + +  +++ +L+ ++ ++G+V                                   P+
Sbjct: 324 LAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPN 383

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +TY V++   C+ G +  +E +L  M EK ++P+  T++++ING V +  + +A  +  
Sbjct: 384 GVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMR 443

Query: 475 EMLQRGFVPD 484
           EM +RG  P+
Sbjct: 444 EMKERGIDPN 453



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 4/233 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC +     A + L EM  +G+ PDT+T+N LI  + + G L+ AF   + M   G
Sbjct: 705 LVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHG 764

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+N+L+ GL   GR   +  VL+EM + G+ P   TY+ L+    ++ N  EA 
Sbjct: 765 ISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAV 824

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++CEM  +G  P + +++ LI  FS+ G + +A   F EM++ G++P +  Y I+++G+
Sbjct: 825 RLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGW 884

Query: 181 C--RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
              RNG   E  K   +M EKG      T ++I     +  M  EA  L   +
Sbjct: 885 SKLRNG--TEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%)

Query: 3   NALCKDHK----IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           NAL  D      +  AK    EM+ +GV P + TY+ L++ + +     E  + +  M  
Sbjct: 843 NALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKE 902

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
           KG  P   T +S+     K G    A+ +L  + ++
Sbjct: 903 KGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYKV 938


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 235/380 (61%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K+  A+ F+  ME  G  P+ V+YNT+I+ Y   G +E A +++++M  KG++P  +TY 
Sbjct: 188 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 247

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           SLI+G+CK+GR + A  + D+M+++GL P+  TYNTL+   C K ++  A     EM ++
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 307

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G+ P + +++ L+      G++  A    +EM+  G++PD + Y I+INGY R G    A
Sbjct: 308 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRA 367

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             + +EML KG     VTY +++  L R   + EADDLF ++L++GV PD   F  +I G
Sbjct: 368 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDG 427

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           HC +GN+ +A  L   M +KS+ PD VT+NTL+ G C+ G++E+A  L  +M  R I P+
Sbjct: 428 HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPD 487

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
           +ISY  LI+GY   G + +AF +  EM+  G  PTL++ N +IK  C++ +   A+E L 
Sbjct: 488 HISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLK 547

Query: 370 KMVSEGVDPDSISYNTLING 389
           +MV++G+ PD  +Y +LI G
Sbjct: 548 EMVNKGISPDDSTYLSLIEG 567



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 225/391 (57%)

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           +G+  +A+E +  M  +G  P+  +YNT++     + N+  A  I   M  +G+ PD  +
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           + +LI    + G+L+ A   F +M   GLVP+ V Y  +I+GYC  G +  A   RDEM+
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           +KG +  V TYN +++ L     + EADD+  EM ++G+ PD  T+  LI+G+ + GN  
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A +L + M  K I+P  VTY +LI    +   M++A+ L+  ++ + +SP+ I +  +I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G+C+ G+V  AF L  EM  K + P  V+ NT+++G CR G   +A   L +M   G+ 
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD ISYNTLI+G+ R  ++  AF +  +M + G  P ++TYN ++   C+      +E +
Sbjct: 486 PDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 545

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           L  M+ KG++PD STY +LI G  + + L E
Sbjct: 546 LKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 134/382 (35%), Positives = 216/382 (56%)

Query: 43  EGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTAT 102
           EG L++A + +  M G G KP V +YN++I+G   +G  + A+ +LD M   G+ PD+ T
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 103 YNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
           Y +L+   C++  + EA  +F +M   G+ P+ V+++TLI  +   G L+RA  Y  EM 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
             G++P    Y ++++     G + EA  M  EM +KG + D +TYN ++NG  R     
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
            A DL NEML +G+ P   T+T+LI+   +   M +A +LF+ +  + + PD++ +N +I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           DG C  G +E+A  L  +M  + + P+ +++  L+ G C  G V EA  L  EM  +GIK
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P  +S NT+I GY R GD   A     +M+S G +P  ++YN LI    + +  D A  L
Sbjct: 486 PDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 545

Query: 403 VSKMENQGLVPDVITYNVILTG 424
           + +M N+G+ PD  TY  ++ G
Sbjct: 546 LKEMVNKGISPDDSTYLSLIEG 567



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 218/377 (57%), Gaps = 3/377 (0%)

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
           L++   +  ++   E+F E++   ++ D +S  + I      G+L +A  +   M+  G 
Sbjct: 148 LLKQVMETRIATNRELFDELT---LSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGF 204

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            P+ V Y  II+GY   G +  A ++ D M  KG   D  TY ++++G+C+   L EA  
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           LF++M+E G+ P+  T+ TLI G+C  G++ +A +  D M +K I P + TYN L+    
Sbjct: 265 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALF 324

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
             G M +A+ +  +M  + I P+ I+Y ILINGY   G+   AF L  EM+ KGI+PT V
Sbjct: 325 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHV 384

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           +  ++I    R     +AD+   K++ +GV PD I +N +I+G     N+++AF L+ +M
Sbjct: 385 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM 444

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           + + + PD +T+N ++ G CR+G++ ++ ++L  M  +G+ PD  +Y TLI+G+  + ++
Sbjct: 445 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDI 504

Query: 467 KEAFRFHDEMLQRGFVP 483
           K+AF   DEML  GF P
Sbjct: 505 KDAFXVRDEMLSIGFNP 521



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 186/326 (57%), Gaps = 3/326 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ +CK+ +++ A     +M + G+ P+ VTYNTLI+ YC +G LE AF   + M  KG
Sbjct: 249 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 308

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN L++ L  +GR   A +++ EM + G+ PD  TYN L+    R  N   A 
Sbjct: 309 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAF 368

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  +G+ P  V++++LI + SR  ++  A   F ++   G+ PD +++  +I+G+
Sbjct: 369 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGH 428

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C NG V  A  +  EM  K    D VT+NT++ G CR   + EA  L +EM  RG+ PD 
Sbjct: 429 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDH 488

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI G+ + G++  A  + D M      P ++TYN LI   CK  E + A +L  +
Sbjct: 489 ISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 548

Query: 301 MISRKISPNYISYGILINGYCSMGHV 326
           M+++ ISP+  +Y  LI G   MG+V
Sbjct: 549 MVNKGISPDDSTYLSLIEG---MGNV 571



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 159/295 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C    ++ A  +  EM +KG+ P   TYN L++A   EG + EA  ++  M  KG
Sbjct: 284 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 343

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TYN LING  + G   RA ++ +EML  G+ P   TY +L+    R+  M EA+
Sbjct: 344 IIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 403

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F ++  +GV+PD++ F+ +I     NG ++RA M  +EM    + PD V +  ++ G 
Sbjct: 404 DLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGR 463

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V EA  + DEM  +G   D ++YNT+++G  R   + +A  + +EML  G  P  
Sbjct: 464 CREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTL 523

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
            T+  LI   CK+   + A  L   M  K I PD  TY +LI+G   V  + + N
Sbjct: 524 LTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDN 578


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 161/521 (30%), Positives = 274/521 (52%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ ALCK  K+D+    L E+ + G+ P  VTYN L++A C+ G +EEAF+L   M   G
Sbjct: 227 MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 286

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+  LINGL +  R      VL EM Q+G+SP+   YN L+   CRK + S+A 
Sbjct: 287 MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQAL 346

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV------------- 167
            +F EM  + + P  V+++ +     + G+++RA     +M S G+              
Sbjct: 347 RLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWL 406

Query: 168 -----------------------PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
                                  P++ L T  +   C+ G   EA+ +  + L KG  ++
Sbjct: 407 LQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVN 466

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + T N +++GLC  K + EA  +   ML +G+  D  T+  +I G CKD  M +A+ L  
Sbjct: 467 LATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHG 526

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            MT++  KPD+ T+NTL+  +C +G+ME+   L   M +  + P+ +SYG +I+G+C   
Sbjct: 527 DMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAK 586

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A     E++ +G+KP +   N +I GY R+GD S A + +  M S G+ P +++Y 
Sbjct: 587 DIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYG 646

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           +L+        +++A  + S+     +   VI Y +++ G+C+ G+M ++      M  +
Sbjct: 647 SLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSR 706

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G++P++ TYTTL+  +    N +EA +  DEM+  G +PD+
Sbjct: 707 GISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDN 747



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 220/456 (48%), Gaps = 38/456 (8%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
           F  ++ I    +   C RA +    +   G  P   T N  L    R   +  A E+F E
Sbjct: 152 FLIHTFITSPAQGSLC-RAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDE 210

Query: 126 MSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           M   R VA +  S++ +I    + G++D       E+  AGL P  V Y ++++  C++G
Sbjct: 211 MRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 270

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V EA +++  M + G    VVT+  ++NGL R +   E   +  EM + GV P+   + 
Sbjct: 271 RVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYN 330

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS- 303
            LI  HC+ G+ ++AL LFD M  K +KP  VTYN +    CK GEME+A ++  DM+S 
Sbjct: 331 ELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSI 390

Query: 304 -----------------------------------RKISPNYISYGILINGYCSMGHVTE 328
                                              R + PN       +   C  G   E
Sbjct: 391 GMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQE 450

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +W++ + KG+   L + N +I G C      +A + +  M+++G++ DSI+YN +I 
Sbjct: 451 AVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIR 510

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  ++  M++A  L   M  +G  PD+ T+N +L  +C  G+M ++  +L +M  +GL P
Sbjct: 511 GCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQP 570

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D  +Y T+I+GH    ++++A  +  E++ RG  P+
Sbjct: 571 DIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPN 606



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 222/426 (52%), Gaps = 1/426 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYC-REGFLEEAFQLMNSMSGK 59
           +  ALCK+ +++ A+  L +M   G+      +NT++     R   LE    + N M  +
Sbjct: 367 IAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTR 426

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G++P      + +  LCK G+   A  +  + L  GL  + AT N L+   C  + M EA
Sbjct: 427 GMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEA 486

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++   M  +G+  D ++++ +I    ++ +++ A+    +M   G  PD   +  +++ 
Sbjct: 487 TKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHA 546

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC  G + E   + D+M  +G   D+V+Y TI++G C+AK + +A +   E+++RG+ P+
Sbjct: 547 YCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPN 606

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            + +  LI G+ ++G+++ A++  + M    I+P  VTY +L+   C  G +E+A  +++
Sbjct: 607 VFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFS 666

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                 +    I Y I+I GYC +G + EA   + EM  +GI P  ++  T++  Y +SG
Sbjct: 667 QARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSG 726

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           ++ +A +   +MV  GV PD+I+Y TLI       ++DK     +++ +  L  D   YN
Sbjct: 727 NSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYN 786

Query: 420 VILTGF 425
           ++  G 
Sbjct: 787 ILSNGI 792



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDS 380
           S+    +AFR+   +  +G  P++ +CN  ++   R+G    A E   +M  S  V  + 
Sbjct: 165 SLCRAADAFRV---LSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNE 221

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            SY  +I    +   +D  F +++++   GL P V+TYNV++   C+ GR+ ++  +  R
Sbjct: 222 YSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGR 281

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           M + G+ P   T+  LING        E      EM Q G  P++  
Sbjct: 282 MEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVI 328


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 156/496 (31%), Positives = 268/496 (54%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G++PD VT+ TL++  C E  + EA    + M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T+ +L+NGLC++GR   A  +LD M++ GL P   TY T++   C+K +   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 121 EIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M     + P++V +S +I    ++G+   A   F EM+  G+ PD   Y  +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   +A ++  EMLE+    DVVTYN ++N   +     EA++L++EML RG+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++++I G CK   ++ A ++F +M  K   P+++T+NTLIDG+C    ++   +L  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    +  +  +Y  LI+G+  +G +  A  L  EM+  G+ P +V+C+T++ G C +G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 360 DASKADEFLSKMVSE-----------GVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
               A E    M              GV+PD  +YN LI+G + E    +A  L  +M +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+VPD ITY+ ++ G C+Q R+ ++  +   M  K  +P+  T+TTLING+     + +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 469 AFRFHDEMLQRGFVPD 484
                 EM +RG V +
Sbjct: 600 GLELFCEMGRRGIVAN 615



 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 267/496 (53%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC + ++  A  F  +M +    P+ VT+ TL+N  CREG + EA  L++ M   G
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG 214

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
           L+P   TY ++++G+CKKG    A  +L +M ++  + P+   Y+ ++   C+    S+A
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +F EM  +G+ PD+ +++++I  F  +G+   A    +EM    + PD V Y  +IN 
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + + G   EA ++ DEML +G + + +TY+++++G C+   L  A+ +F  M  +G  P+
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF TLI G+C    ++  + L   MT+  +  D  TYNTLI GF  VG++  A  L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-----------GIKPTLVSC 348
           +MIS  + P+ ++   L++G C  G + +A  ++  M              G++P + + 
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I G    G   +A+E   +M   G+ PD+I+Y+++I+G  ++  +D+A  +   M +
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +   P+V+T+  ++ G+C+ GR+ D   +   M  +G+  +  TY TLI G     N+  
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNING 634

Query: 469 AFRFHDEMLQRGFVPD 484
           A     EM+  G  PD
Sbjct: 635 ALDIFQEMISSGVYPD 650



 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 152/470 (32%), Positives = 256/470 (54%), Gaps = 14/470 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  L+    R    +    L   M  K ++  ++++N LI   C   +   A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++ ++GL PD  T+ TLL   C ++ +SEA + F +M      P++V+F+TL+    R
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVV 206
            G++  A+     M   GL P  + Y  I++G C+ G  + AL +  +M E   ++ +VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            Y+ I++ LC+    ++A +LF EM E+G+FPD +T+ ++I G C  G  + A  L   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ I PD+VTYN LI+ F K G+  +A +L+ +M+ R I PN I+Y  +I+G+C    +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  ++Y M  KG  P L++ NT+I GYC +       E L +M   G+  D+ +YNTL
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-- 444
           I+GF    +++ A  L+ +M + GL PD++T + +L G C  G++ D+ L ++++++K  
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA-LEMFKVMQKSK 495

Query: 445 ----------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                     G+ PD  TY  LI+G +++    EA   ++EM  RG VPD
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 264/481 (54%), Gaps = 12/481 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++N LC++ +I  A   L  M + G+ P  +TY T+++  C++G    A  L+  M    
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P V  Y+++I+ LCK GR   A+ +  EM + G+ PD  TYN+++V  C     S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E++  EM  R ++PD+V+++ LI  F + G+   A   + EM   G++P+ + Y+ +I+G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +  A  M   M  KGC  +++T+NT+++G C AK + +  +L +EM E G+  D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIHG    G++N AL+L   M    + PDIVT +TL+DG C  G+++ A +++ 
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+  +Y ILI+G  + G   EA  L+ EM  +GI P  ++ 
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G C+     +A +    M S+   P+ +++ TLING+ +   +D    L  +M  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V + ITY  ++ GF + G ++ +  I   MI  G+ PD  T   ++ G  S+  LK 
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 469 A 469
           A
Sbjct: 670 A 670



 Score =  274 bits (700), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 139/418 (33%), Positives = 241/418 (57%), Gaps = 11/418 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCKD +   A+    EM++KG++PD  TYN++I  +C  G   +A QL+  M  + 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LIN   K+G+   A+E+ DEML  G+ P+T TY++++   C++  +  AE
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+ +G +P++++F+TLI  +    ++D  +    EM   GLV D   Y  +I+G+
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
              G +  AL +  EM+  G   D+VT +T+L+GLC    L +A ++F  M +       
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 235 -----GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                GV PD  T+  LI G   +G   +A  L++ M  + I PD +TY+++IDG CK  
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A +++  M S+  SPN +++  LINGYC  G V +   L+ EM  +GI    ++  
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           T+I G+ + G+ + A +   +M+S GV PD+I+   ++ G   +E + +A A++ K++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 208/372 (55%), Gaps = 1/372 (0%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +A ++F +M R    P +V F  L+G+  R  + D  +  +++M+   +  D   +
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            I+I  +C    +  AL    ++ + G   DVVT+ T+L+GLC    ++EA D F++M E
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
               P+  TFTTL++G C++G + +A+ L D M +  ++P  +TY T++DG CK G+   
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 294 ANKLWADMIS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           A  L   M     I PN + Y  +I+  C  G  ++A  L+ EM  KGI P L + N++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G+C SG  S A++ L +M+   + PD ++YN LIN FV+E    +A  L  +M  +G++
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+ ITY+ ++ GFC+Q R+  +E + + M  KG +P+  T+ TLI+G+     + +    
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 473 HDEMLQRGFVPD 484
             EM + G V D
Sbjct: 418 LHEMTETGLVAD 429



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 55/340 (16%)

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  GF  E+LK++                   +G    K L +A DLF++ML     P  
Sbjct: 39  CEAGFGGESLKLQ-------------------SGFHEIKGLEDAIDLFSDMLRSRPLPSV 79

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  L+    +    +  ++L+  M +K I+ DI ++N LI  FC   ++  A   +  
Sbjct: 80  VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGK 139

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+ +++  L++G C    V+EA   +++M     +P +V+  T++ G CR G 
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME------------- 407
             +A   L +M+ +G+ P  I+Y T+++G  ++ +   A  L+ KME             
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 408 -----------------------NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
                                   +G+ PD+ TYN ++ GFC  GR  D+E +L  M+E+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++PD  TY  LIN  V +    EA   +DEML RG +P+
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 152/496 (30%), Positives = 270/496 (54%), Gaps = 16/496 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC DH++  A     ++  +   PD +T+ TL+N  CREG + EA  L++ M   G
Sbjct: 157 LLHGLCLDHRVSEA----LDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENG 212

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
           L+P   TY + ++G+CK G    A  +L +M ++  + P+   Y+ ++   C+    S++
Sbjct: 213 LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDS 272

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM  +G+ P+IV+++ +IG F  +G+   A    +EM    + P+ V Y  +IN 
Sbjct: 273 HNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + + G   EA ++ DEML +G + + +TYN++++G C+   L  A+D+F  M  +G  PD
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +TFTTLI G+C    ++  + L   M ++ +  + VTYNTLI GFC VG++  A  L  
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-----------GIKPTLVSC 348
            MIS  + P+ ++   L++G C  G + +A  ++  M              G++P +++ 
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I G    G   +A+E   +M   G+ PD+I+Y+++I+G  ++  +D+A  +   M +
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +   P+V+T+N ++ G+C+ GR+ D   +   M  +G+  D   Y TLI G     N+  
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632

Query: 469 AFRFHDEMLQRGFVPD 484
           A     EM+  G  PD
Sbjct: 633 ALDIFQEMISSGVYPD 648



 Score =  285 bits (729), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 157/497 (31%), Positives = 265/497 (53%), Gaps = 13/497 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++N LC++ ++  A   L  M + G+ PD +TY T ++  C+ G    A  L+  M    
Sbjct: 188 LMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEIS 247

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +KP V  Y+++I+GLCK GR   +  +  EM   G+ P+  TYN ++   C     S A
Sbjct: 248 HIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAA 307

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +  EM  R ++P++V+++ LI  F + G+   A   + EM   G++P+ + Y  +I+G
Sbjct: 308 QRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +  A  M   M  KGC  DV T+ T+++G C AK + +  +L +EM  RG+  +
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIHG C  G++N AL+L   M    + PDIVT NTL+DG C  G+++ A +++ 
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+ ++Y ILI G  + G   EA  L+ EM  +GI P  ++ 
Sbjct: 488 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G C+     +A +    M S+   P+ +++NTLING+ +   +D    L  +M  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V D I Y  ++ GF + G ++ +  I   MI  G+ PD  T   ++ G  S+  L+ 
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667

Query: 469 AFRFHDEMLQRGFVPDD 485
           A    ++ LQR  + D+
Sbjct: 668 AVAMLED-LQRYQLEDE 683



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 262/527 (49%), Gaps = 43/527 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A+ +  + D       +ME+K +  D  ++  LI  +C    L  A      ++  G
Sbjct: 87  LMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLG 146

Query: 61  LKPGVFTYNSLI-------------------------------NGLCKKGRCDRAKEVLD 89
           L P V T+ +L+                               NGLC++GR   A  +LD
Sbjct: 147 LHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLD 206

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR-RGVAPDIVSFSTLIGIFSRN 148
            M++ GL PD  TY T +   C+  +   A  +  +M     + P++V +S +I    ++
Sbjct: 207 RMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKD 266

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+   +   F EM+  G+ P+ V Y  +I G+C +G    A ++  EMLE+    +VVTY
Sbjct: 267 GRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTY 326

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N ++N   +     EA +L++EML RG+ P+  T+ ++I G CK   ++ A ++F +M  
Sbjct: 327 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT 386

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K   PD+ T+ TLIDG+C    ++   +L  +M  R +  N ++Y  LI+G+C +G +  
Sbjct: 387 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNA 446

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE-----------GVD 377
           A  L  +M+  G+ P +V+CNT++ G C +G    A E    M              GV+
Sbjct: 447 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVE 506

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD ++YN LI G + E    +A  L  +M ++G+VPD ITY+ ++ G C+Q R+ ++  +
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              M  K  +P+  T+ TLING+     + +      EM +RG V D
Sbjct: 567 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613



 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 257/487 (52%), Gaps = 18/487 (3%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ++ A     +M +    P  + +N L+ A  R    +    L   M  K ++  ++++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI   C   +   A     ++ ++GL PD  T+ TLL   C    +SEA ++F ++ R  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             PD+++F+TL+    R G++  A+     M   GL PD + Y   ++G C+ G  + AL
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 191 KMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            +  +M E   +  +VV Y+ I++GLC+    +++ +LF EM ++G+FP+  T+  +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C  G  + A  L   M ++ I P++VTYN LI+ F K G+  +A +L+ +M+ R I PN
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            I+Y  +I+G+C    +  A  ++Y M  KG  P + +  T+I GYC +       E L 
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M   G+  ++++YNTLI+GF    +++ A  L  +M + G+ PD++T N +L G C  G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 430 RMHDSELILWRMIEK------------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           ++ D+ L +++ ++K            G+ PD  TY  LI G +++    EA   ++EM 
Sbjct: 478 KLKDA-LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 536

Query: 478 QRGFVPD 484
            RG VPD
Sbjct: 537 HRGIVPD 543



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 213/373 (57%), Gaps = 7/373 (1%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +A ++F +M R    P ++ F+ L+G   R  + D  +  +++M+   +  D   +
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           TI+I  +C    +  AL    ++ + G   DVVT+ T+L+GLC    ++EA DLF+++  
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
               PD  TFTTL++G C++G + +A+ L D M +  ++PD +TY T +DG CK+G+   
Sbjct: 180 ----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 294 ANKLWADM--ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           A  L   M  IS  I PN + Y  +I+G C  G  +++  L+ EM  KGI P +V+ N +
Sbjct: 236 ALNLLRKMEEISH-IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I G+C SG  S A   L +M+   + P+ ++YN LIN FV+E    +A  L  +M  +G+
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           +P+ ITYN ++ GFC+Q R+  +E + + M  KG +PD  T+TTLI+G+     + +   
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 472 FHDEMLQRGFVPD 484
              EM +RG V +
Sbjct: 415 LLHEMPRRGLVAN 427



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 4/196 (2%)

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           L  G  ++  +E A  L++DM+  +  P+ I +  L+     M        L+ +M  K 
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           I+  + S   +IK +C       A     K+   G+ PD +++ TL++G   +  + +A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L     +Q   PDV+T+  ++ G CR+GR+ ++  +L RM+E GL PD+ TY T ++G 
Sbjct: 172 DLF----HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 461 VSQNNLKEAFRFHDEM 476
               +   A     +M
Sbjct: 228 CKMGDTVSALNLLRKM 243


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 152/496 (30%), Positives = 270/496 (54%), Gaps = 16/496 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC DH++  A     ++  +   PD +T+ TL+N  CREG + EA  L++ M   G
Sbjct: 157 LLHGLCLDHRVSEA----LDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENG 212

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
           L+P   TY + ++G+CK G    A  +L +M ++  + P+   Y+ ++   C+    S++
Sbjct: 213 LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDS 272

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM  +G+ P+IV+++ +IG F  +G+   A    +EM    + P+ V Y  +IN 
Sbjct: 273 HNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + + G   EA ++ DEML +G + + +TYN++++G C+   L  A+D+F  M  +G  PD
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +TFTTLI G+C    ++  + L   M ++ +  + VTYNTLI GFC VG++  A  L  
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-----------GIKPTLVSC 348
            MIS  + P+ ++   L++G C  G + +A  ++  M              G++P +++ 
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I G    G   +A+E   +M   G+ PD+I+Y+++I+G  ++  +D+A  +   M +
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +   P+V+T+N ++ G+C+ GR+ D   +   M  +G+  D   Y TLI G     N+  
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632

Query: 469 AFRFHDEMLQRGFVPD 484
           A     EM+  G  PD
Sbjct: 633 ALDIFQEMISSGVYPD 648



 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 153/481 (31%), Positives = 257/481 (53%), Gaps = 12/481 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++N LC++ ++  A   L  M + G+ PD +TY T ++  C+ G    A  L+  M    
Sbjct: 188 LMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEIS 247

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +KP V  Y+++I+GLCK GR   +  +  EM   G+ P+  TYN ++   C     S A
Sbjct: 248 HIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAA 307

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +  EM  R ++P++V+++ LI  F + G+   A   + EM   G++P+ + Y  +I+G
Sbjct: 308 QRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +  A  M   M  KGC  DV T+ T+++G C AK + +  +L +EM  RG+  +
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIHG C  G++N AL+L   M    + PDIVT NTL+DG C  G+++ A +++ 
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+ ++Y ILI G  + G   EA  L+ EM  +GI P  ++ 
Sbjct: 488 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G C+     +A +    M S+   P+ +++NTLING+ +   +D    L  +M  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V D I Y  ++ GF + G ++ +  I   MI  G+ PD  T   ++ G  S+  L+ 
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667

Query: 469 A 469
           A
Sbjct: 668 A 668



 Score =  277 bits (709), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 140/418 (33%), Positives = 239/418 (57%), Gaps = 11/418 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCKD +   +     EM+ KG++P+ VTYN +I  +C  G    A +L+  M  + 
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LIN   K+G+   A E+ DEML  G+ P+T TYN+++   C+++ +  AE
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M+ +G +PD+ +F+TLI  +    ++D  +    EM   GLV + V Y  +I+G+
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
           C  G +  AL +  +M+  G   D+VT NT+L+GLC    L +A ++F  M +       
Sbjct: 439 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 498

Query: 235 -----GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                GV PD  T+  LI G   +G   +A  L++ M  + I PD +TY+++IDG CK  
Sbjct: 499 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A +++  M S+  SPN +++  LINGYC  G V +   L+ EM  +GI    +   
Sbjct: 559 RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 618

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           T+I G+ + G+ + A +   +M+S GV PD+I+   ++ GF  +E +++A A++  ++
Sbjct: 619 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 262/527 (49%), Gaps = 43/527 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A+ +  + D       +ME+K +  D  ++  LI  +C    L  A      ++  G
Sbjct: 87  LMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLG 146

Query: 61  LKPGVFTYNSLI-------------------------------NGLCKKGRCDRAKEVLD 89
           L P V T+ +L+                               NGLC++GR   A  +LD
Sbjct: 147 LHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLD 206

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR-RGVAPDIVSFSTLIGIFSRN 148
            M++ GL PD  TY T +   C+  +   A  +  +M     + P++V +S +I    ++
Sbjct: 207 RMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKD 266

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+   +   F EM+  G+ P+ V Y  +I G+C +G    A ++  EMLE+    +VVTY
Sbjct: 267 GRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTY 326

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N ++N   +     EA +L++EML RG+ P+  T+ ++I G CK   ++ A ++F +M  
Sbjct: 327 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT 386

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K   PD+ T+ TLIDG+C    ++   +L  +M  R +  N ++Y  LI+G+C +G +  
Sbjct: 387 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNA 446

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE-----------GVD 377
           A  L  +M+  G+ P +V+CNT++ G C +G    A E    M              GV+
Sbjct: 447 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVE 506

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD ++YN LI G + E    +A  L  +M ++G+VPD ITY+ ++ G C+Q R+ ++  +
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              M  K  +P+  T+ TLING+     + +      EM +RG V D
Sbjct: 567 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613



 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 146/470 (31%), Positives = 251/470 (53%), Gaps = 18/470 (3%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +N L+ A  R    +    L   M  K ++  ++++  LI   C   +   A   
Sbjct: 79  PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++ ++GL PD  T+ TLL   C    +SEA ++F ++ R    PD+++F+TL+    R
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCR 194

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVV 206
            G++  A+     M   GL PD + Y   ++G C+ G  + AL +  +M E   +  +VV
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            Y+ I++GLC+    +++ +LF EM ++G+FP+  T+  +I G C  G  + A  L   M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ I P++VTYN LI+ F K G+  +A +L+ +M+ R I PN I+Y  +I+G+C    +
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  ++Y M  KG  P + +  T+I GYC +       E L +M   G+  ++++YNTL
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-- 444
           I+GF    +++ A  L  +M + G+ PD++T N +L G C  G++ D+ L +++ ++K  
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA-LEMFKAMQKSK 493

Query: 445 ----------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                     G+ PD  TY  LI G +++    EA   ++EM  RG VPD
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 218/402 (54%), Gaps = 5/402 (1%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A ++  +ML+    P    +N L+    R E       ++ +M R+ +  DI SF+ LI 
Sbjct: 65  AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            F    +L  AL  F ++   GL PD V +T +++G C +  V EAL    ++  + C  
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL----DLFHQICRP 180

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           DV+T+ T++NGLCR   + EA  L + M+E G+ PD  T+ T + G CK G+   ALNL 
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240

Query: 264 DIMTQKS-IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
             M + S IKP++V Y+ +IDG CK G    ++ L+ +M  + I PN ++Y  +I G+C 
Sbjct: 241 RKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G  + A RL  EM+ + I P +V+ N +I  + + G   +A E   +M+  G+ P++I+
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN++I+GF +++ +D A  +   M  +G  PDV T+  ++ G+C   R+ D   +L  M 
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +GL  +  TY TLI+G     +L  A     +M+  G  PD
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 213/373 (57%), Gaps = 7/373 (1%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +A ++F +M R    P ++ F+ L+G   R  + D  +  +++M+   +  D   +
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           TI+I  +C    +  AL    ++ + G   DVVT+ T+L+GLC    ++EA DLF+++  
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
               PD  TFTTL++G C++G + +A+ L D M +  ++PD +TY T +DG CK+G+   
Sbjct: 180 ----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 294 ANKLWADM--ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           A  L   M  IS  I PN + Y  +I+G C  G  +++  L+ EM  KGI P +V+ N +
Sbjct: 236 ALNLLRKMEEISH-IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I G+C SG  S A   L +M+   + P+ ++YN LIN FV+E    +A  L  +M  +G+
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           +P+ ITYN ++ GFC+Q R+  +E + + M  KG +PD  T+TTLI+G+     + +   
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 472 FHDEMLQRGFVPD 484
              EM +RG V +
Sbjct: 415 LLHEMPRRGLVAN 427



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 4/196 (2%)

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           L  G  ++  +E A  L++DM+  +  P+ I +  L+     M        L+ +M  K 
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           I+  + S   +IK +C       A     K+   G+ PD +++ TL++G   +  + +A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L     +Q   PDV+T+  ++ G CR+GR+ ++  +L RM+E GL PD+ TY T ++G 
Sbjct: 172 DLF----HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 461 VSQNNLKEAFRFHDEM 476
               +   A     +M
Sbjct: 228 CKMGDTVSALNLLRKM 243


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 276/484 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K+  A   + ++ + G  P+TVT+NTL+N  C EG + EA +L++ M    
Sbjct: 131 MINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ 190

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + T N+++NGLC K R   A +++  M+  G  P+  TY  +L   C+  N + A 
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M  R + P +V+++ +I    ++G+LD AL +F EM++ G+  +   Y  +I  +
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +  ++  +M+ +    +VVT++ +++ L +   LTEA DL+NEM+ RG+ P+ 
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNT 370

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI+G C D  +++A  + D+M  K   PDI TYN LI+GFCK  +++   +L+  
Sbjct: 371 ITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRK 430

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  + ++Y  LI G+C    +  A +++ EMV +G+ P +++   ++ G C +G+
Sbjct: 431 MSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGE 490

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L +M    ++ D   YN +I+G      +D A++L   + ++G+  D+ +YN+
Sbjct: 491 LEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNI 550

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L+G C++  + +++ +  +M E G  PD  TY TLI  H+  N++  + +  +EM + G
Sbjct: 551 MLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCG 610

Query: 481 FVPD 484
           F  D
Sbjct: 611 FSSD 614



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 221/422 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LC   ++  A   +  M   G  P+  TY  ++N  C+ G    A  L+  M  + 
Sbjct: 201 IVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRK 260

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V TY  +I+ LCK GR D A     EM   G+  +  TYN+L+   C      +  
Sbjct: 261 IKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGA 320

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M  R + P++V+FS LI    + G+L  A   + EM + G+ P+ + Y  +I G 
Sbjct: 321 QLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGL 380

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA +M D M+ KGC  D+ TYN ++NG C+AK + +   LF +M  RG+  D 
Sbjct: 381 CNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADT 440

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI G C+   +  A  +F  M  + + P I+TY  L+DG C  GE+E+A  +   
Sbjct: 441 VTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQ 500

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   K+  +   Y I+I+G C+   V +A+ L+  +  KG+K  + S N ++ G C+   
Sbjct: 501 MHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSS 560

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+AD    KM  +G +PD  +YNTLI   +R  ++  +  L+ +M+  G   D  T  +
Sbjct: 561 LSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKI 620

Query: 421 IL 422
           ++
Sbjct: 621 VM 622



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 232/469 (49%), Gaps = 35/469 (7%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D K D A      M +    P  + +N L     R    +    L   M  KG+   ++T
Sbjct: 68  DIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYT 127

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            N +IN  C++ +   A   + ++ ++G  P+T T+NTLL   C +  + EA E+   M 
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
                PD+++ +T                                   I+NG C    V 
Sbjct: 188 LSQHVPDLITLNT-----------------------------------IVNGLCLKDRVS 212

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EA+ +   M+  GC  +  TY  ILN +C++     A DL  +M  R + P   T+T +I
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
              CKDG ++ AL+ F  M  K IK ++ TYN+LI  FC  G  +   +L  DMI+RKI+
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN +++  LI+     G +TEA  L+ EM+ +GI+P  ++ N++I G C      +A++ 
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           +  MVS+G DPD  +YN LINGF + + +D    L  KM  +G++ D +TY+ ++ GFC+
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
             ++  ++ +   M+ +G++P   TY  L++G      L+EA    D+M
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 164/294 (55%), Gaps = 1/294 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++L K+ K+  AK    EM  +G+ P+T+TYN+LI   C +  L+EA Q+M+ M  KG
Sbjct: 341 LIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKG 400

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P ++TYN LING CK  + D    +  +M   G+  DT TY+TL+   C+   +  A+
Sbjct: 401 CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAK 460

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  +GV P I++++ L+     NG+L+ AL    +M    +  D  +Y III+G 
Sbjct: 461 KVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGM 520

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V +A  +   +  KG   D+ +YN +L+GLC+   L+EAD LF +M E G  PD 
Sbjct: 521 CNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDG 580

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            T+ TLI  H +  ++  ++ L + M +     D  T   ++D     GE++K+
Sbjct: 581 CTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMD-MLSSGELDKS 633


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 167/487 (34%), Positives = 266/487 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  K   A  F  +M   G+ P   TYN +I    REG LE A  L   M  KG
Sbjct: 222 LLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKG 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P + TYNSLI+G  K G    A  V +EM   G  PD  TYN+L+   C+ E + +A 
Sbjct: 282 LRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAF 341

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E    M +RG+ P++V++STLI  F + G L  A  +F +M   GL P+   YT +I+  
Sbjct: 342 EYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDAN 401

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA K+  EM + G  +++VTY  +L+GLC    + EA++LF  +L+ G   + 
Sbjct: 402 CKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQ 461

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+L HG+ K   M KA+++ + M +K++KPD++ Y T I G C+  E+E +  +  +
Sbjct: 462 QIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIRE 521

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   ++ N   Y  LI+ Y  +G  TEA  L  EM   GIK T+V+   +I G C+ G 
Sbjct: 522 MMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGL 581

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A  +   M   G+ P+ + Y  LI+G  + + +++A  L ++M ++G+ PD + Y  
Sbjct: 582 VQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTS 641

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + G   ++  +  RM+E G+  D   YT+LI G      ++ A    DEML++G
Sbjct: 642 LIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKG 701

Query: 481 FVPDDAF 487
            +PD   
Sbjct: 702 IIPDQVL 708



 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 264/482 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L ++  +++A+    EM+ KG+ PD VTYN+LI+ Y + G L  A  +   M   G
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG 316

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYNSLIN  CK  R  +A E L  M Q GL P+  TY+TL+   C+   + EA 
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEAN 376

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F +M R G+ P+  ++++LI    + G L+ A     EM+ AG+  + V YT +++G 
Sbjct: 377 KFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGL 436

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + EA ++   +L+ G  ++   Y ++ +G  +AKM+ +A D+  EM ++ + PD 
Sbjct: 437 CEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDL 496

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T I G C+   +  ++ +   M    +  +   Y TLID + KVG+  +A  L  +
Sbjct: 497 LLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQE 556

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I    ++YG+LI+G C +G V +A R +  M   G++P ++    +I G C++  
Sbjct: 557 MQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDC 616

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A    ++M+ +G+ PD + Y +LI+G ++  N  +A +L ++M   G+  D+  Y  
Sbjct: 617 LEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTS 676

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GF R G++  ++ +L  M+ KG+ PD+     L+  +    ++ EA   HD+M +RG
Sbjct: 677 LIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736

Query: 481 FV 482
            +
Sbjct: 737 LI 738



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/457 (32%), Positives = 244/457 (53%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++TL N     G LEEA Q    M+   + P V + N L++ L K  +   A   
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M+  GLSP   TYN ++    R+ ++  A  +F EM  +G+ PDIV++++LI  + +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G L  A+  F EMK AG  PD + Y  +IN +C+   + +A +    M ++G   +VVT
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T+++  C+A ML EA+  F +M+  G+ P+ +T+T+LI  +CK G++N+A  L   M 
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q  +  +IVTY  L+DG C+ G M +A +L+  ++    + N   Y  L +GY     + 
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMME 478

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  +  EM  K +KP L+   T I G CR  +   +   + +M+  G+  +S  Y TLI
Sbjct: 479 KAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLI 538

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           + + +     +A  L+ +M++ G+   V+TY V++ G C+ G +  +      M   GL 
Sbjct: 539 DAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQ 598

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+   YT LI+G    + L+EA    +EML +G  PD
Sbjct: 599 PNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 224/420 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +I  A  +L  M+Q+G+ P+ VTY+TLI+A+C+ G L EA +    M   G
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P  FTY SLI+  CK G  + A ++  EM Q G++ +  TY  LL   C    M EAE
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  + + G   +   +++L   + +   +++A+    EM    L PD +LY   I G 
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   + +++ +  EM++ G   +   Y T+++   +    TEA +L  EM + G+    
Sbjct: 507 CRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITV 566

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK G + +A+  FD MT+  ++P+I+ Y  LIDG CK   +E+A  L+ +
Sbjct: 567 VTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNE 626

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + ISP+ + Y  LI+G    G+  EA  L   MV  G++  L +  ++I G+ R G 
Sbjct: 627 MLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQ 686

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   L +M+ +G+ PD +    L+  +    ++++A AL   M  +GL+   I   V
Sbjct: 687 VQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITV 746



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 119/227 (52%), Gaps = 2/227 (0%)

Query: 261 NLFDIM--TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           + FD++  T+   +P    ++TL +    +G +E+A + +  M   ++ P   S   L++
Sbjct: 165 DFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLH 224

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
                     A   + +MV  G+ P++ + N +I    R GD   A     +M ++G+ P
Sbjct: 225 RLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRP 284

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D ++YN+LI+G+ +   +  A ++  +M++ G  PDVITYN ++  FC+  R+  +   L
Sbjct: 285 DIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYL 344

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M ++GL P+  TY+TLI+       L EA +F  +M++ G  P++
Sbjct: 345 HGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNE 391


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 261/474 (55%), Gaps = 1/474 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D+ K+F  EM   GV P+ +TYNT+I+ + + G LE  F+L + M   G KP + TYN L
Sbjct: 34  DALKVF-DEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVL 92

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++GLC+ GR D  + ++DEM    + PD  TY+ L     R         +F E  ++GV
Sbjct: 93  LSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGV 152

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
                + S L+    ++G++ +A      +   GLVP  V+Y  +INGYC+   +  A  
Sbjct: 153 MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 212

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + ++M  +    D +TYN ++NGLC+ +M+T+A+DL  EM + GV P   TF TLI  + 
Sbjct: 213 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 272

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
             G + K   +   M QK IK D++++ +++  FCK G++ +A  +  DMI + ++PN  
Sbjct: 273 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 332

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y  +I+ Y   G   +AF L  +M   G+  ++V+ N ++KG CRS    +A+E +  +
Sbjct: 333 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 392

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            ++G+ PD +SYNT+I+    + + DKA  L+ +M   G+ P + TY+ +++     GR+
Sbjct: 393 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 452

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           HD E +  +M+ K + P  S Y  +++ +V   N  +      EM ++G   DD
Sbjct: 453 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 506



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 237/460 (51%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD  +YN +I    R G   +A ++ + M   G+ P   TYN++I+G  K G  +    +
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            D+ML  G  P+  TYN LL   CR   M E   +  EM+   + PD  ++S L    +R
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+    L  F E    G++      +I++NG C++G V +A ++ + ++  G V   V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++NG C+ + L  A  +F +M  R + PD  T+  LI+G CK   + KA +L   M 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  + P + T+NTLID +   G++EK   + +DM  + I  + IS+G ++  +C  G + 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +M+ K + P     N+II  Y  SGD  +A   + KM + GV    ++YN L+
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  R   +D+A  L+  + NQGL PDV++YN I++  C +G    +  +L  M + G+ 
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 433

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           P   TY TL++   S   + +    + +ML +   P  + 
Sbjct: 434 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 473



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 217/414 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  ++D  ++ + EM    ++PD  TY+ L +   R G       L      KG
Sbjct: 92  LLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKG 151

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +  G +T + L+NGLCK G+  +A++VL+ ++  GL P T  YNTL+   C+  ++  A 
Sbjct: 152 VMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAF 211

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF +M  R + PD ++++ LI    +   + +A     EM+ +G+ P    +  +I+ Y
Sbjct: 212 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 271

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + +   +  +M +KG   DV+++ +++   C+   + EA  + ++M+ + V P+ 
Sbjct: 272 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 331

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + ++I  + + G+  +A  L + M    +   IVTYN L+ G C+  ++++A +L   
Sbjct: 332 QVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 391

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + ++ + P+ +SY  +I+  C+ G   +A  L  EM   GI+PTL + +T++     +G 
Sbjct: 392 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR 451

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
               +    +M+ + V+P S  Y  +++ +VR EN  K  +L  +M  +G+  D
Sbjct: 452 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 88/170 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  +    + A + + +M+  GV    VTYN L+   CR   ++EA +L+ ++  +G
Sbjct: 337 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 396

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V +YN++I+  C KG  D+A E+L EM + G+ P   TY+TL+        + + E
Sbjct: 397 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 456

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
            ++ +M  + V P    +  ++  + R     +     +EM   G+  D+
Sbjct: 457 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 506


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 158/461 (34%), Positives = 260/461 (56%), Gaps = 3/461 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++++  K+ + D A M L EME +G     + VTYN +I+   REG LE A +L++SM  
Sbjct: 249 LLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRL 308

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
              K   FTYN LI  L ++G   + + +  EM   G+ P   TYN ++    + E +  
Sbjct: 309 SK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEA 367

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A+  F EM   G+ PD++++++++  + + G L  AL    +++ AGL P  + Y  +I+
Sbjct: 368 AQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 427

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYCR G + EA ++++EM+E+GC  DV TY  ++NG  + + L  A + F+EML +G+ P
Sbjct: 428 GYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQP 487

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D + + T I      G+ +KA  L ++M  K I PD VTYN +IDG CK G ++ A  L 
Sbjct: 488 DCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLK 547

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+S  + P+ I+Y  LI+ +C  G ++EA +L   MV  G++P++V+   +I   CR 
Sbjct: 548 MKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRR 607

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+   A  +  KM+  G++P+ I+YN LI+   R      A+    +M  +GL P+  TY
Sbjct: 608 GNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTY 667

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            +++ G CR+G   D+  + + M + G+ PD  T+  L  G
Sbjct: 668 TLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 708



 Score =  295 bits (754), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 162/477 (33%), Positives = 268/477 (56%), Gaps = 3/477 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM--SGKGLKPGVFT 67
           + D  +    EM Q  + P  VTYNTL++++ +EG  +EA  L+  M   G G      T
Sbjct: 223 RWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVT 282

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           YN +I+ L ++G  + A +++D M ++     + TYN L+     +  + + E +  EM 
Sbjct: 283 YNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEALQMEME 341

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G+ P +V+++ +I    ++ Q++ A + F EM++ GL+PD + Y  ++NGYC+ G + 
Sbjct: 342 NEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLK 401

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EAL +  ++   G    V+TYNT+++G CR   L EA  L  EM+E+G FPD  T+T L+
Sbjct: 402 EALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILM 461

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +G  K  N+  A   FD M  K ++PD   YNT I     +G+  KA +L   M+ + I 
Sbjct: 462 NGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIY 521

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ ++Y ++I+G C  G++ +A  L  +MV  G++P  ++   +I  +C  G  S+A + 
Sbjct: 522 PDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKL 581

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           L+ MVS+G+ P  ++Y  LI+   R  N+  A+    KM + G+ P+ ITYNV++   CR
Sbjct: 582 LNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCR 641

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GR   +      M+E+GL P++ TYT LI+G+  + N  +A R + EM Q G  PD
Sbjct: 642 TGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 698



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 206/372 (55%), Gaps = 1/372 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  ++++A++   EM   G+ PD +TYN+++N YC+ G L+EA  L+  +   G
Sbjct: 355 IIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAG 414

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TYN+LI+G C+ G  + A+ + +EM++ G  PD  TY  L+  S +  N+  A 
Sbjct: 415 LAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAR 474

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E F EM  +G+ PD  +++T I      G   +A      M   G+ PD V Y +II+G 
Sbjct: 475 EFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGL 534

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A  ++ +M+  G   D +TY  +++  C   +L+EA  L N M+  G+ P  
Sbjct: 535 CKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSV 594

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LIH  C+ GN+  A   F  M    I+P+ +TYN LI   C+ G    A   + +
Sbjct: 595 VTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHE 654

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R ++PN  +Y +LI+G C  G+  +A RL++EM   GI P   + N + KG+ + G 
Sbjct: 655 MLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK-GH 713

Query: 361 ASKADEFLSKMV 372
              A E+L  +V
Sbjct: 714 MYHAIEYLENIV 725



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 203/390 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL +   +   +    EME +G+ P  VTYN +I+   +   +E A      M   G
Sbjct: 320 LITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMG 379

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + TYNS++NG CK G    A  +L ++ + GL+P   TYNTL+   CR   + EA 
Sbjct: 380 LLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEAR 439

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G  PD+ +++ L+    +   L  A  +F EM S GL PD   Y   I   
Sbjct: 440 RLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAE 499

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G   +A ++R+ M+ KG   D VTYN I++GLC+   L +A DL  +M+  G+ PD 
Sbjct: 500 LILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDC 559

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LIH HC+ G +++A  L + M    ++P +VTY  LI   C+ G +  A   +  
Sbjct: 560 ITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRK 619

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   I PN I+Y +LI+  C  G    A+  ++EM+ +G+ P   +   +I G CR G+
Sbjct: 620 MLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGN 679

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            + A     +M   G+ PD  ++N L  GF
Sbjct: 680 WADAIRLYFEMHQNGIPPDYCTHNALFKGF 709



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 232/430 (53%), Gaps = 7/430 (1%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P V   N ++  L    R D  + V  EMLQ+ + P   TYNTLL    ++    EA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 120 EEIFCEMSRRG--VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
             +  EM  +G     + V+++ +I   +R G L+ A      M+ +     +  Y  +I
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKA-SSFTYNPLI 321

Query: 178 NGYCRNGFV--LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
                 GFV  +EAL+M  EM  +G +  +VTYN I++GL +++ +  A   F EM   G
Sbjct: 322 TALLERGFVQKVEALQM--EMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMG 379

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + PD  T+ ++++G+CK GN+ +AL L   + +  + P ++TYNTLIDG+C++G +E+A 
Sbjct: 380 LLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEAR 439

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           +L  +M+ +   P+  +Y IL+NG   + ++  A   + EM+ KG++P   + NT I   
Sbjct: 440 RLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAE 499

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
              GD  KA +    M+ +G+ PD+++YN +I+G  +  N+  A  L  KM + GL PD 
Sbjct: 500 LILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDC 559

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           ITY  ++   C +G + ++  +L  M+  GL P   TYT LI+    + NL  A+ +  +
Sbjct: 560 ITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRK 619

Query: 476 MLQRGFVPDD 485
           ML  G  P++
Sbjct: 620 MLDVGIEPNE 629



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 115/212 (54%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  KG+YPDTVTYN +I+  C+ G L++A  L   M   GL+P   TY  LI+  C++G 
Sbjct: 515 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGL 574

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A+++L+ M+  GL P   TY  L+   CR+ N+  A   F +M   G+ P+ ++++ 
Sbjct: 575 LSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNV 634

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    R G+   A  +F EM   GL P+   YT++I+G CR G   +A+++  EM + G
Sbjct: 635 LIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNG 694

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
              D  T+N +  G  +  M    + L N +L
Sbjct: 695 IPPDYCTHNALFKGFDKGHMYHAIEYLENIVL 726



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 36/261 (13%)

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L  F ++    + PD+   N ++         +    ++ +M+  +I P  ++Y  L++ 
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252

Query: 320 YCSMGHVTEAFRLWYEMVGKG------------------------------------IKP 343
           +   G   EA  L  EM  +G                                     K 
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKA 312

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           +  + N +I      G   K +    +M +EG+ P  ++YN +I+G ++ E ++ A    
Sbjct: 313 SSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKF 372

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           ++M   GL+PD+ITYN +L G+C+ G + ++  +L  +   GL P   TY TLI+G+   
Sbjct: 373 AEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 432

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
             L+EA R  +EM+++G  PD
Sbjct: 433 GGLEEARRLKEEMVEQGCFPD 453


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 267/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV PD +TYN++++ +C  G  +EA   +  M   G
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG 188

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYNSL++ LCK GRC  A+++ D M + GL P+  TY TLL     K  + E  
Sbjct: 189 VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 248

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ P+   FS L+  +++  +++ A++ F +M+  GL P+ V Y  +I   
Sbjct: 249 GLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGIL 308

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A+   ++M+++G     + YN++++GLC       A++L  EML+RG+  + 
Sbjct: 309 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 368

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I  HCK+G + ++  LFD+M +  +KPDI+TY+TLIDG+C  G+M++A KL A 
Sbjct: 369 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 428

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++Y  LINGYC +  + +A  L+ EM   G+ P +++ N I++G  ++  
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    +   G   +  +YN +++G  + +  D A  +   +    L  +  T+N+
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 548

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  +++ +       GL P+  TY  +    + Q  L+E  +    M   G
Sbjct: 549 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608

Query: 481 FVPD 484
              D
Sbjct: 609 CTVD 612



 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/450 (32%), Positives = 253/450 (56%), Gaps = 3/450 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG--LKPGVFTYN 69
           + A+    E+ ++G+ PD  +YN L+N  C E   +EA +L++ M+  G    P V +Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           ++ING  K+G  D+     +EML   +SP+  TYN+++   C+ + + +A E+   M + 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           GV PD +++++++  F  +GQ   A+++ ++M+S G+ PD V Y  +++  C+NG   EA
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            K+ D M ++G   ++ TY T+L G      L E   L + M+  G+ P+ Y F+ L+  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           + K   + +A+ +F  M Q+ + P+ VTY  +I   CK G +E A   +  MI   +SP 
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            I Y  LI+G C+      A  L  EM+ +GI    +  N+II  +C+ G   ++++   
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            MV  GV PD I+Y+TLI+G+     MD+A  L++ M + G+ PD +TY+ ++ G+C+  
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS 452

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLING 459
           RM D+ ++   M   G++PD  TY  ++ G
Sbjct: 453 RMKDALVLFREMESSGVSPDIITYNIILQG 482



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 249/440 (56%), Gaps = 3/440 (0%)

Query: 47  EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG--LSPDTATYN 104
           E+A  + + +  +G+ P VF+YN L+NGLC + R   A E+L  M   G    PD  +Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           T++    ++ ++ +    + EM  + ++P++V+++++I    +   +D+A+     M  +
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G++PD + Y  I++G+C +G   EA+    +M   G   DVVTYN++++ LC+    TEA
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +F+ M +RG+ P+  T+ TL+ G+   G + +   L D+M +  I P+   ++ L+  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           + K  ++E+A  +++ M  + ++PN ++YG +I   C  G V +A   + +M+ +G+ P 
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
            +  N++I G C      +A+E + +M+  G+  ++I +N++I+   +E  + ++  L  
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            M   G+ PD+ITY+ ++ G+C  G+M ++  +L  M+  G+ PD  TY+TLING+   +
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS 452

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
            +K+A     EM   G  PD
Sbjct: 453 RMKDALVLFREMESSGVSPD 472



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 203/374 (54%), Gaps = 1/374 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V A  K  K++ A +   +M Q+G+ P+ VTY  +I   C+ G +E+A      M  +G
Sbjct: 269 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 328

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG   YNSLI+GLC   + +RA+E++ EML  G+  +T  +N+++   C++  + E+E
Sbjct: 329 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 388

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV PDI+++STLI  +   G++D A      M S G+ PD V Y+ +INGY
Sbjct: 389 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGY 448

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM   G   D++TYN IL GL + +    A +L+  + + G   + 
Sbjct: 449 CKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLEL 508

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   + AL +F  +    +K +  T+N +ID   KVG  ++A  L+  
Sbjct: 509 STYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 568

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
             S  + PNY +Y ++       G + E  +L+  M   G        N I++   + G+
Sbjct: 569 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 628

Query: 361 ASKADEFLSKMVSE 374
            ++A  +LS M+ E
Sbjct: 629 ITRAGTYLS-MIDE 641



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 182/332 (54%), Gaps = 3/332 (0%)

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG--CVMDVVTYNTILNGL 215
           F E+   G +PD   Y I++NG C      EAL++   M + G  C  DVV+Y+T++NG 
Sbjct: 40  FDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF 98

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
            +   L +    +NEML++ + P+  T+ ++I   CK   ++KA+ +   M +  + PD 
Sbjct: 99  FKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDC 158

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           +TYN+++ GFC  G+ ++A      M S  + P+ ++Y  L++  C  G  TEA +++  
Sbjct: 159 MTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS 218

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M  +G+KP + +  T+++GY   G   +    L  MV  G+ P+   ++ L+  + ++E 
Sbjct: 219 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 278

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +++A  + SKM  QGL P+ +TY  ++   C+ GR+ D+ L   +MI++GL+P    Y +
Sbjct: 279 VEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 338

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           LI+G  + N  + A     EML RG   +  F
Sbjct: 339 LIHGLCTCNKWERAEELILEMLDRGICLNTIF 370


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 154/485 (31%), Positives = 267/485 (55%), Gaps = 16/485 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR----------------EG 44
           ++N L K+ ++D A     EM  +G  P+ VTYN++I+  C+                +G
Sbjct: 145 VINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKG 204

Query: 45  FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
            LEEA +L+  MSG GL+P V TY+ LI+  CK GRC  A+ + D M++ G +PD  TY 
Sbjct: 205 QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYR 264

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           TLL     K  + +  ++   M + G+  +   F+ LI  +++N  LD+A+  F EM+  
Sbjct: 265 TLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQK 324

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  P+ V YT +I+  C+ G V +A+    +M+ +G   D++T+ ++++GLC      + 
Sbjct: 325 GFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKV 384

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
           + L  EM+ RG+ P+     T++   CK+G + +A + FD +    +KPD+V+Y  LIDG
Sbjct: 385 EKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDG 444

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           +C  G+M+++ KL   M+S  + P+ ++Y  L+NGYC  G V +A  L+ EM  K +KP 
Sbjct: 445 YCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPN 504

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
            ++ N I+ G   +G    A EF  K+V  G+     +YN ++ G      +D+A  +  
Sbjct: 505 AITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQ 564

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            + ++    +V T+N+++ G  + GR+ D++ +   ++  GL PD   Y  +I  H+ + 
Sbjct: 565 GLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEG 624

Query: 465 NLKEA 469
            L+E+
Sbjct: 625 LLEES 629



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 243/454 (53%), Gaps = 19/454 (4%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ ++YN +IN   +EG +++A+ L + M G+G  P + TYNS+I+GLCK    D+A+ V
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L +M   G                    + EA  +  +MS  G+ PD+V++S LI  + +
Sbjct: 197 LQQMFDKG-------------------QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCK 237

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+   A   F  M   G  PD   Y  +++GY   G +++   +   M++ G  ++   
Sbjct: 238 IGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHV 297

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N ++    + + L +A   F EM ++G  P+  T+TT+I   CK G +  A++ F  M 
Sbjct: 298 FNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV 357

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            + + PDI+T+ +LI G C +GE +K  KL  +MI+R I PN I    +++  C  G V 
Sbjct: 358 SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVL 417

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA   + +++  G+KP +VS   +I GYC  G   ++ + L +MVS G+ PD+++Y+ L+
Sbjct: 418 EAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALL 477

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           NG+ +   +D A AL  +M ++ + P+ ITYN+IL G    GR+  +     ++++ G+ 
Sbjct: 478 NGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQ 537

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
              +TY  ++ G    + + EA R    +  + F
Sbjct: 538 LGINTYNIVLGGLCENSFVDEALRMFQGLRSKEF 571



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 206/371 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K+  +D A     EM QKG  P+ VTY T+I+  C+ G +E+A    + M  +G
Sbjct: 301 LIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEG 360

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + T+ SLI+GLC  G   + +++  EM+  G+ P+    NT++   C++  + EA 
Sbjct: 361 LSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAH 420

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F ++   GV PD+VS++ LI  +  +G++D ++     M S GL PDNV Y+ ++NGY
Sbjct: 421 DFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGY 480

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG V +AL +  EM  K    + +TYN IL+GL  A  +  A + + ++++ G+    
Sbjct: 481 CKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGI 540

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++ G C++  +++AL +F  +  K  + ++ T+N +I G  KVG +  A  L++ 
Sbjct: 541 NTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSA 600

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++   + P+ I YG++I  +   G + E+  L+  M   G      + N I++     GD
Sbjct: 601 ILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGD 660

Query: 361 ASKADEFLSKM 371
             +A  +L+K+
Sbjct: 661 VRRAGTYLTKI 671



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 243/507 (47%), Gaps = 71/507 (14%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLC-------KKGRCDRAKEVLDEMLQMG--- 95
           LE+A  L + +  +     V  +N ++  +        ++     A  + + M Q+G   
Sbjct: 30  LEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNK 89

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV----------APDIVSFSTLIGIF 145
           L+ D  T+  L+   C    +  A E     SR  V           P+++S++ +I   
Sbjct: 90  LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGL 149

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR----------------NGFVLEA 189
            + G++D+A   F EM   G  P+ V Y  +I+G C+                 G + EA
Sbjct: 150 FKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEA 209

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           +++  +M   G   DVVTY+ +++  C+    TEA ++F+ M+ RG  PD YT+ TL+HG
Sbjct: 210 VRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHG 269

Query: 250 HCKDG-----------------------------------NMNKALNLFDIMTQKSIKPD 274
           +   G                                    ++KA+  F  M QK   P+
Sbjct: 270 YATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPN 329

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
           +VTY T+ID  CK G +E A   ++ M+S  +SP+ I++  LI+G C++G   +  +L +
Sbjct: 330 VVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSF 389

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM+ +GI P  +  NTI+   C+ G   +A +F  +++  GV PD +SY  LI+G+  + 
Sbjct: 390 EMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDG 449

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            MD++  L+ +M + GL PD +TY+ +L G+C+ GR+ D+  +   M  K + P+  TY 
Sbjct: 450 KMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYN 509

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGF 481
            +++G      +  A  F+ +++  G 
Sbjct: 510 IILHGLFHAGRVVAAREFYMKIVDSGI 536



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 211/438 (48%), Gaps = 36/438 (8%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLV-------ESCRKENMSEAEEIFCEMSRRGV---AP 133
           A  + DE+L    S     +N +L         S ++   + A  +F  M++ GV   A 
Sbjct: 33  ALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNKLAT 92

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL---------VPDNVL-YTIIINGYCRN 183
           D  +F  LI  F   G LD AL        A +          P NVL Y ++ING  + 
Sbjct: 93  DACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKE 152

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF------ 237
           G V +A  +  EML +G   ++VTYN++++GLC+A+ + +A+ +  +M ++G        
Sbjct: 153 GEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRL 212

Query: 238 ----------PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
                     PD  T++ LI  +CK G   +A N+FD M ++   PD  TY TL+ G+  
Sbjct: 213 LKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYAT 272

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G +   + L A MI   I      + ILI  Y     + +A   + EM  KG  P +V+
Sbjct: 273 KGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVT 332

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
             T+I   C++G    A    S+MVSEG+ PD I++ +LI+G        K   L  +M 
Sbjct: 333 YTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMI 392

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           N+G+ P+ I  N I+   C++GR+ ++     ++I  G+ PD  +YT LI+G+     + 
Sbjct: 393 NRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMD 452

Query: 468 EAFRFHDEMLQRGFVPDD 485
           E+ +    M+  G  PD+
Sbjct: 453 ESIKLLGRMVSIGLRPDN 470



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 195/411 (47%), Gaps = 55/411 (13%)

Query: 106 LLVESCRKENMS--EAEEIFCEMSRRGVAPDIVSFSTLIGIFS--------RNGQLDRAL 155
           ++VE  R  ++   +A  +F E+  R  +  + +F+ ++ + +        R+G    A+
Sbjct: 18  IIVEQHRSGSLGLEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAA-LAV 76

Query: 156 MYFREMKSAG---LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
             F  M   G   L  D   + I+I  +C  G +  AL    E   +G            
Sbjct: 77  SLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFAL----EEESRGS----------- 121

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
               RA +   ADD +N        P+  ++  +I+G  K+G ++KA  LF  M  +   
Sbjct: 122 ----RAAVHMMADDGYN------CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFP 171

Query: 273 PDIVTYNTLIDGFCKV----------------GEMEKANKLWADMISRKISPNYISYGIL 316
           P+IVTYN++IDG CK                 G++E+A +L   M    + P+ ++Y +L
Sbjct: 172 PNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLL 231

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+ YC +G  TEA  ++  MV +G  P   +  T++ GY   G      + L+ M+ +G+
Sbjct: 232 IDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGI 291

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
             +   +N LI  + + E +DKA     +M  +G  P+V+TY  ++   C+ GR+ D+  
Sbjct: 292 PLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVS 351

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
              +M+ +GL+PD  T+T+LI+G  +    K+  +   EM+ RG  P+  F
Sbjct: 352 HFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIF 402


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 261/474 (55%), Gaps = 1/474 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D+ K+F  EM   GV P+ +TYNT+I+ + + G LE  F+L + M   G KP + TYN L
Sbjct: 212 DALKVF-DEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVL 270

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++GLC+ GR D  + ++DEM    + PD  TY+ L     R         +F E  ++GV
Sbjct: 271 LSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGV 330

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
                + S L+    ++G++ +A      +   GLVP  V+Y  +INGYC+   +  A  
Sbjct: 331 MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 390

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + ++M  +    D +TYN ++NGLC+ +M+T+A+DL  EM + GV P   TF TLI  + 
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
             G + K   +   M QK IK D++++ +++  FCK G++ +A  +  DMI + ++PN  
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y  +I+ Y   G   +AF L  +M   G+  ++V+ N ++KG CRS    +A+E +  +
Sbjct: 511 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            ++G+ PD +SYNT+I+    + + DKA  L+ +M   G+ P + TY+ +++     GR+
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 630

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           HD E +  +M+ K + P  S Y  +++ +V   N  +      EM ++G   DD
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684



 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 237/460 (51%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD  +YN +I    R G   +A ++ + M   G+ P   TYN++I+G  K G  +    +
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            D+ML  G  P+  TYN LL   CR   M E   +  EM+   + PD  ++S L    +R
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+    L  F E    G++      +I++NG C++G V +A ++ + ++  G V   V 
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++NG C+ + L  A  +F +M  R + PD  T+  LI+G CK   + KA +L   M 
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  + P + T+NTLID +   G++EK   + +DM  + I  + IS+G ++  +C  G + 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +M+ K + P     N+II  Y  SGD  +A   + KM + GV    ++YN L+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  R   +D+A  L+  + NQGL PDV++YN I++  C +G    +  +L  M + G+ 
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           P   TY TL++   S   + +    + +ML +   P  + 
Sbjct: 612 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 651



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 217/414 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  ++D  ++ + EM    ++PD  TY+ L +   R G       L      KG
Sbjct: 270 LLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKG 329

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +  G +T + L+NGLCK G+  +A++VL+ ++  GL P T  YNTL+   C+  ++  A 
Sbjct: 330 VMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAF 389

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF +M  R + PD ++++ LI    +   + +A     EM+ +G+ P    +  +I+ Y
Sbjct: 390 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 449

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + +   +  +M +KG   DV+++ +++   C+   + EA  + ++M+ + V P+ 
Sbjct: 450 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 509

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + ++I  + + G+  +A  L + M    +   IVTYN L+ G C+  ++++A +L   
Sbjct: 510 QVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 569

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + ++ + P+ +SY  +I+  C+ G   +A  L  EM   GI+PTL + +T++     +G 
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR 629

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
               +    +M+ + V+P S  Y  +++ +VR EN  K  +L  +M  +G+  D
Sbjct: 630 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 79/144 (54%), Gaps = 2/144 (1%)

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P+L SCN +++     G  +        +V+ G  PD+ ++N ++   V   ++D A A+
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 403 VSKM-ENQGL-VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
           V +M  ++G   PD  +YNV++ G  R G+  D+  +   M++ G+ P+  TY T+I+GH
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPD 484
           V   +L+  FR  D+ML  G  P+
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPN 263



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 88/170 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  +    + A + + +M+  GV    VTYN L+   CR   ++EA +L+ ++  +G
Sbjct: 515 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 574

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V +YN++I+  C KG  D+A E+L EM + G+ P   TY+TL+        + + E
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 634

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
            ++ +M  + V P    +  ++  + R     +     +EM   G+  D+
Sbjct: 635 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 162/496 (32%), Positives = 266/496 (53%), Gaps = 16/496 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G +P  VT+NTL++  C E  + EA  L + M    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC--- 178

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V T+ +L+NGLC++GR   A  +LD ML+ GL P+  TY T++   C+  +   A 
Sbjct: 179 -KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 121 EIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M     + P++V ++T+I    ++G+   A   F EM+   + PD V Y  +ING
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   +A ++  EMLE+    DVVT++ ++N   +     EA++L++EML R + P 
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++++I G CK   ++ A ++F +   K   PDI+T+NTLI G+C+   ++   KL  
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    +  N I+Y  LI+G+C +G +  A  L  EM+  G+ P +V+CNT++ G C +G
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG 477

Query: 360 DASKADEFLSKMVSE-----------GVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
               A E    M              GV+PD  +YN LI G + E    +A  L  +M +
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+VPD ITY+ ++ G C+Q R+ ++  +   M  K  +PD  T+ TLI G+     + +
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDD 597

Query: 469 AFRFHDEMLQRGFVPD 484
                 EM QRG V D
Sbjct: 598 GLELFCEMGQRGIVAD 613



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 257/488 (52%), Gaps = 12/488 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++N LC++ ++  A   L  M + G+ P+ +TY T+++  C+ G    A  L+  M    
Sbjct: 188 LMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVS 247

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P V  YN++I+GL K GR   A  +  EM +  + PD  TYN ++   C     S+A
Sbjct: 248 HIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDA 307

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E++  EM  R + PD+V+FS LI  F + G+   A   + EM    ++P  V Y+ +I+G
Sbjct: 308 EQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDG 367

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +  A  M      KGC  D++T+NT++ G CRAK + +   L +EM E G+  +
Sbjct: 368 FCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 427

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTLIHG C+ G++N A +L   M    + P++VT NTL+DG C  G+++ A +++ 
Sbjct: 428 TITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+  +Y ILI G  + G   EA  L+ EM  +GI P  ++ 
Sbjct: 488 AMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G C+     +A +    M S+   PD +++NTLI G+ +   +D    L  +M  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQ 607

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V D ITY  ++ GF +   +  +  I   MI  G+ PD  T   ++ G  S+  L+ 
Sbjct: 608 RGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELER 667

Query: 469 AFRFHDEM 476
           A    +++
Sbjct: 668 AVAMLEDL 675



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/465 (31%), Positives = 249/465 (53%), Gaps = 16/465 (3%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           ++  L+  +C    L  A      ++  G  P V T+N+L++GLC +   DR  E LD  
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVE---DRISEALDLF 174

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
            QM   P+  T+ TL+   CR+  + EA  +   M   G+ P+ +++ T++    + G  
Sbjct: 175 HQM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233

Query: 152 DRALMYFREMKSAG-LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
             AL   R+M+    ++P+ V+Y  II+G  ++G   +A  +  EM EK    D+VTYN 
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++NG C +   ++A+ L  EMLER + PD  TF+ LI+   K+G   +A  L+D M  +S
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS 353

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I P  VTY+++IDGFCK   ++ A  ++    ++  SP+ I++  LI GYC    V +  
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGI 413

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           +L +EM   G+    ++  T+I G+C+ GD + A + L +M+S GV P+ ++ NTL++G 
Sbjct: 414 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGL 473

Query: 391 VREENMDKAFALVSKMENQ-----------GLVPDVITYNVILTGFCRQGRMHDSELILW 439
                +  A  +   M+             G+ PDV TYN+++ G   +G+  ++E +  
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYE 533

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M  +G+ PD  TY+++I+G   Q+ L EA +  D M  + F PD
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPD 578



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 236/418 (56%), Gaps = 11/418 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L KD +   A     EM++K ++PD VTYN +IN +C  G   +A QL+  M  + 
Sbjct: 259 IIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERK 318

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+++LIN   K+G+   A+E+ DEML   + P T TY++++   C++  +  AE
Sbjct: 319 INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE 378

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F     +G +PDI++F+TLI  + R  ++D  +    EM  AGLV + + YT +I+G+
Sbjct: 379 HMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 438

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
           C+ G +  A  +  EM+  G   +VVT NT+L+GLC    L +A ++F  M +       
Sbjct: 439 CQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 498

Query: 235 -----GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                GV PD  T+  LI G   +G   +A  L++ M  + I PD +TY+++IDG CK  
Sbjct: 499 SRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A +++  M S+  SP+ +++  LI GYC  G V +   L+ EM  +GI    ++  
Sbjct: 559 RLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYI 618

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           T+I G+ +  +   A +   +M+S GV PD+I+   ++ G   +E +++A A++  ++
Sbjct: 619 TLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 253/470 (53%), Gaps = 18/470 (3%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +  L+    R G  +    L   M    +    +++  L+   C   +   A   
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++ ++G  P   T+NTLL   C ++ +SEA ++F +M +    P++V+F+TL+    R
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCR 194

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVV 206
            G++  A+     M   GL P+ + Y  I++G C+ G  + AL +  +M E   ++ +VV
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            YNTI++GL +    ++A +LF EM E+ +FPD  T+  +I+G C  G  + A  L   M
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ I PD+VT++ LI+ F K G+  +A +L+ +M+ R I P+ ++Y  +I+G+C    +
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRL 374

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  ++Y    KG  P +++ NT+I GYCR+       + L +M   G+  ++I+Y TL
Sbjct: 375 DAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 434

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-- 444
           I+GF +  +++ A  L+ +M + G+ P+V+T N +L G C  G++ D+ L +++ ++K  
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDA-LEMFKAMQKSK 493

Query: 445 ----------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                     G+ PD  TY  LI G +++    EA   ++EM  RG VPD
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 228/432 (52%), Gaps = 5/432 (1%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L++A  L   M      P V  +  L+  + + GR D    +  +M  + +  +  ++  
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   C    +  A   F ++++ G  P +V+F+TL+       ++  AL  F +M    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK-- 179

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+ V +T ++NG CR G V+EA+ + D MLE G   + +TY TI++G+C+      A 
Sbjct: 180 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 226 DLFNEMLE-RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
           +L  +M E   + P+   + T+I G  KDG  + A NLF  M +K I PDIVTYN +I+G
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           FC  G    A +L  +M+ RKI+P+ +++  LIN +   G   EA  L+ EM+ + I P+
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
            V+ +++I G+C+      A+       ++G  PD I++NTLI G+ R + +D    L+ 
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M   GLV + ITY  ++ GFC+ G ++ ++ +L  MI  G+ P+  T  TL++G     
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG 477

Query: 465 NLKEAFRFHDEM 476
            LK+A      M
Sbjct: 478 KLKDALEMFKAM 489



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 208/372 (55%), Gaps = 5/372 (1%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +A ++F  M R    P ++ F  L+G+  R G+ D  +   ++M+   +  +   +
Sbjct: 60  KGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSF 119

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           TI++  +C    +  AL    ++ + G    VVT+NT+L+GLC    ++EA DLF++M +
Sbjct: 120 TILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK 179

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
               P+  TFTTL++G C++G + +A+ L D M +  ++P+ +TY T++DG CK+G+   
Sbjct: 180 ----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVS 235

Query: 294 ANKLWADMIS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           A  L   M     I PN + Y  +I+G    G  ++A  L+ EM  K I P +V+ N +I
Sbjct: 236 ALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMI 295

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G+C SG  S A++ L +M+   ++PD ++++ LIN FV+E    +A  L  +M  + ++
Sbjct: 296 NGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSII 355

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P  +TY+ ++ GFC+Q R+  +E + +    KG +PD  T+ TLI G+     + +  + 
Sbjct: 356 PSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKL 415

Query: 473 HDEMLQRGFVPD 484
             EM + G V +
Sbjct: 416 LHEMTEAGLVAN 427



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 139/307 (45%), Gaps = 40/307 (13%)

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           +G    K L +A DLF  M+     P    F  L+    + G  +  ++L   M    + 
Sbjct: 54  SGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            +  ++  L+  FC   ++  A   +  +      P  +++  L++G C    ++EA  L
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL 173

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           +++M     KP +V+  T++ G CR G   +A   L +M+ +G+ P+ I+Y T+++G  +
Sbjct: 174 FHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229

Query: 393 EENMDKAFALVSKME------------------------------------NQGLVPDVI 416
             +   A  L+ KME                                     + + PD++
Sbjct: 230 MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN ++ GFC  GR  D+E +L  M+E+ +NPD  T++ LIN  V +    EA   +DEM
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEM 349

Query: 477 LQRGFVP 483
           L R  +P
Sbjct: 350 LPRSIIP 356



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 4/196 (2%)

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           L  GF ++  ++ A  L+  M+  +  P+ I +  L+     MG       L  +M    
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           +     S   ++K +C       A     K+   G  P  +++NTL++G   E+ + +A 
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L  +M      P+V+T+  ++ G CR+GR+ ++  +L RM+E GL P++ TY T+++G 
Sbjct: 172 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 461 VSQNNLKEAFRFHDEM 476
               +   A     +M
Sbjct: 228 CKMGDTVSALNLLRKM 243


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  298 bits (763), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 159/484 (32%), Positives = 261/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +D A+ FL +M  KGV PD  TYN LI  Y   G  +EA ++   M  + 
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V   N+L+  LCK G+   A++V D M   G +PD  +Y  +L     K  + +  
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   G+APDI +F+ LI  ++  G LD+A++ F EM+  G+ P  V Y  +I   
Sbjct: 382 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A++  ++M+++G V D   Y+ ++ G C    L +A +L +E++  G+  D 
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I+  CK G +  A N+FD+     + PD V YN L+DG+C VG+MEKA +++  
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I PN + YG L+NGYC +G + E   L+ EM+ KGIKP+ +  N II G   +G 
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M   G+  +  +Y+ ++ G  +    D+A  L  ++    +  D+IT N 
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  +  R+ +++ +   +   GL P   TY+ +I   + +  ++EA      M   G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAG 741

Query: 481 FVPD 484
             PD
Sbjct: 742 CEPD 745



 Score =  280 bits (717), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 250/478 (52%), Gaps = 2/478 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY--PDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++ +LC   K   A   L  M + G    PD V YNT+I+ + +EG + +A  L   M  
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G+ P + TY+S+++ LCK    D+A+  L +M+  G+ PD  TYN L+          E
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F EM R+ + PD+V+ +TL+G   + G++  A   F  M   G  PD   YTI++N
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G +++   + D ML  G   D+ T+N ++       ML +A  +FNEM + GV P
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
              T+ T+I   C+ G M+ A+  F+ M  + + PD   Y+ LI GFC  G + KA +L 
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELI 489

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           +++++  +  + + +G +IN  C +G V +A  ++   V  G+ P  V  N ++ GYC  
Sbjct: 490 SEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLV 549

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA      MVS G++P+ + Y TL+NG+ +   +D+  +L  +M  +G+ P  I Y
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 609

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           N+I+ G    GR   +++    M E G+  ++ TY+ ++ G        EA     E+
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 667



 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 263/480 (54%), Gaps = 3/480 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ-LMNSMSGKGLKPGV 65
           + H+ + A  F  ++ + G+  D +  + L+  +C     +EA   L++     G  P V
Sbjct: 125 RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 184

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGL--SPDTATYNTLLVESCRKENMSEAEEIF 123
           F+YN L+  LC +G+  +A ++L  M + G   SPD   YNT++    ++ ++++A ++F
Sbjct: 185 FSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLF 244

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +RG+ PD+V++S+++    +   +D+A  + R+M + G++PDN  Y  +I GY   
Sbjct: 245 KEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 304

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G   EA+++  EM  +  + DVV  NT++  LC+   + EA D+F+ M  +G  PD +++
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           T +++G+   G +    +LFD+M    I PDI T+N LI  +   G ++KA  ++ +M  
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 424

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             + P+ ++Y  +I   C +G + +A   + +M+ +G+ P   + + +I+G+C  G   K
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK 484

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E +S++++ G+  D + + ++IN   +   +  A  +     N GL PD + YN+++ 
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 544

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+C  G+M  +  +   M+  G+ P+   Y TL+NG+     + E      EMLQ+G  P
Sbjct: 545 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 237/460 (51%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P + TY  L++   R    E A      +   GL+      + L+ G C+  R D A ++
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 88  L-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV--APDIVSFSTLIGI 144
           L     ++G  PD  +YN LL   C +    +A+++   M+  G   +PD+V+++T+I  
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G +++A   F+EM   G+ PD V Y+ +++  C+   + +A     +M+ KG + D
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             TYN ++ G        EA  +F EM  + + PD     TL+   CK G + +A ++FD
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K   PD+ +Y  +++G+   G +     L+  M+   I+P+  ++ +LI  Y + G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A  ++ EM   G+KP +V+  T+I   CR G    A E  ++M+ +GV PD  +Y+
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI GF    ++ KA  L+S++ N G+  D++ +  I+   C+ GR+ D++ I    +  
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL+PD   Y  L++G+     +++A R  D M+  G  P+
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 207/420 (49%), Gaps = 15/420 (3%)

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-------AEEIFCEMSRRGVA 132
           R + A ++LDE+ + G        N  L    R  + +        A  +F   + R   
Sbjct: 46  RPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQG 105

Query: 133 PDIVS-----FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           P ++S     ++ L+   +R  + + AL +F ++   GL  D ++ + ++ G+C      
Sbjct: 106 PRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTD 165

Query: 188 EALK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF--PDFYTFT 244
           EAL  +     E GCV DV +YN +L  LC      +ADDL   M E G    PD   + 
Sbjct: 166 EALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           T+I G  K+G++NKA +LF  M Q+ I PD+VTY++++   CK   M+KA      M+++
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + P+  +Y  LI GY S G   EA R++ EM  + I P +V+ NT++   C+ G   +A
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            +    M  +G +PD  SY  ++NG+  +  +     L   M   G+ PD+ T+NV++  
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 405

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   G +  + +I   M + G+ P   TY T+I        + +A    ++M+ +G VPD
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 200/396 (50%), Gaps = 5/396 (1%)

Query: 96  LSPDTATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           LSP + TY  +L++ C + +  E A   F ++ R G+  D +  S L+  F    + D A
Sbjct: 109 LSPTSYTY-AILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167

Query: 155 L-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG--CVMDVVTYNTI 211
           L +        G VPD   Y I++   C  G   +A  +   M E G  C  DVV YNT+
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++G  +   + +A DLF EM++RG+ PD  T+++++H  CK   M+KA      M  K +
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            PD  TYN LI G+   G+ ++A +++ +M  + I P+ ++   L+   C  G + EA  
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           ++  M  KG  P + S   ++ GY   G      +    M+ +G+ PD  ++N LI  + 
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 407

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
               +DKA  + ++M + G+ P V+TY  ++   CR G+M D+     +MI++G+ PD+ 
Sbjct: 408 NCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKY 467

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            Y  LI G  +  +L +A     E++  G   D  F
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 503


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  298 bits (763), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 165/487 (33%), Positives = 270/487 (55%), Gaps = 5/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC  +++DSA   L +M + G  P+ + Y TLI+A  + G + E  +L+  M   G
Sbjct: 241 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMG 300

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+N  I+GLCK  R   A +++D ML  G +P++ TY  L+   CR   + EA 
Sbjct: 301 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEAR 360

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-MKSAGLVPDNVLYTIIING 179
            +  ++      P++V F+TLI  +   G+LD A     E M S G  PD   Y  +I G
Sbjct: 361 MLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 416

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G+++ A ++ +EM  KGC  +V+TY  +++  C+   L EA ++ +EM  +G+  +
Sbjct: 417 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 476

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  LI   CKD  +  ALN+F  M+ K  KPDI T+N+LI G CKV + E+A  L+ 
Sbjct: 477 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 536

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM+   +  N I+Y  LI+ +   G + EA +L  +M+ +G     ++ N +IK  CR+G
Sbjct: 537 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 596

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  K       M+S+G++P++IS N LING  R  N+  A   +  M ++GL PD++TYN
Sbjct: 597 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 656

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+ GR  ++  +  ++  +G+ PD  TY TLI+ H  +    +A       +  
Sbjct: 657 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 716

Query: 480 GFVPDDA 486
           GF+P++ 
Sbjct: 717 GFIPNEV 723



 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 154/429 (35%), Positives = 248/429 (57%), Gaps = 5/429 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ LCK  +I  A   +  M  +G  P++ TY  L++  CR G ++EA  L+N +     
Sbjct: 312 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP---- 367

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDE-MLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            P V  +N+LING   +GR D AK V+ E ML +G  PD  TYNTL++  C+K  +  A 
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +G  P++++++ LI  F + G+L+ A     EM   GL  + V Y  +I+  
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 487

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  V +AL M  +M  KGC  D+ T+N+++ GLC+     EA  L+ +ML  GV  + 
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 547

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIH   + G M +AL L + M  +    D +TYN LI   C+ G +EK   L+ D
Sbjct: 548 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 607

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+ ++PN IS  ILING C  G++  A     +M+ +G+ P +V+ N++I G C++G 
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 667

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A +A     K+  EG+ PD+I+YNTLI+   +E   D A  L+S+  + G +P+ +T+ +
Sbjct: 668 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 727

Query: 421 ILTGFCRQG 429
           +++ F ++G
Sbjct: 728 LVSNFIKEG 736



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 224/394 (56%), Gaps = 5/394 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMN-SMSGK 59
           +++ LC+  K+D A+M L ++      P+ V +NTLIN Y   G L+EA  +M+ SM   
Sbjct: 346 LMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 401

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P +FTYN+LI GLCKKG    A+E+++EM   G  P+  TY  L+   C++  + EA
Sbjct: 402 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 461

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EMS +G+A + V ++ LI    ++ ++  AL  F +M S G  PD   +  +I G
Sbjct: 462 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 521

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+     EAL +  +ML +G + + +TYNT+++   R   + EA  L N+ML RG   D
Sbjct: 522 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 581

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  LI   C+ GN+ K L LF+ M  K + P+ ++ N LI+G C+ G ++ A +   
Sbjct: 582 DITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 641

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DMI R ++P+ ++Y  LING C  G   EA  L+ ++  +GI P  ++ NT+I  +C+ G
Sbjct: 642 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 701

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
               A   LS+ V  G  P+ +++  L++ F++E
Sbjct: 702 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 735



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 244/547 (44%), Gaps = 82/547 (14%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLI 72
           S ++F     QKG       Y  LI+     G  +    L+  M  +G+   VF  +  I
Sbjct: 112 SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGI---VFRESLFI 168

Query: 73  NGLCKKGRCDRAKEVLDEMLQM----GLSPDTATYNT----LLVESCRKENMSEAEEIFC 124
             +   GR     +    +L M       P   +YN     LL  +C K        +F 
Sbjct: 169 LIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKV----VPNVFY 224

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM  +G++P + +F  ++       ++D A    ++M   G VP+ ++Y  +I+   + G
Sbjct: 225 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVG 284

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V E LK+ +EML  GC+ DV T+N  ++GLC+   + EA  L + ML RG  P+ +T+ 
Sbjct: 285 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 344

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSI--------------------------------K 272
            L+HG C+ G +++A  L + +   ++                                 
Sbjct: 345 VLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG 404

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           PDI TYNTLI G CK G +  A +L  +M  +   PN I+Y ILI+ +C  G + EA  +
Sbjct: 405 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 464

Query: 333 WYEMVGKGI-----------------------------------KPTLVSCNTIIKGYCR 357
             EM GKG+                                   KP + + N++I G C+
Sbjct: 465 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 524

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
                +A      M+ EGV  ++I+YNTLI+ F+R   M +A  LV+ M  +G   D IT
Sbjct: 525 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 584

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN ++   CR G +     +   M+ KGLNP+  +   LING     N++ A  F  +M+
Sbjct: 585 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 644

Query: 478 QRGFVPD 484
            RG  PD
Sbjct: 645 HRGLTPD 651


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  298 bits (762), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 154/476 (32%), Positives = 262/476 (55%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK   +D AK F C M + G+ PD  +YN LI+  C  G + EA  L N M   GL+P +
Sbjct: 292 CKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDM 351

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TYN L  G    G  + A  ++ +ML  G +P+  TY  L+   C+  N+ EA +++ E
Sbjct: 352 VTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKE 411

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M   G    I+S + L+G   ++ Q+D A   F EM++ GL PD + Y+ +I+G C+ G 
Sbjct: 412 MISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGE 471

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V +A+ + ++M     + + + +  IL GLC    +++A   F+ ++   +  D   +  
Sbjct: 472 VQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNI 531

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           +I G+ K GN  +A+ L+  + +K I P IVT+N+L+ GFC   ++ +A +L   +    
Sbjct: 532 MIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHG 591

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           + PN ++Y  L+N YC  G++     L  EM  K I PT ++   +IKG C+     ++ 
Sbjct: 592 LEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESC 651

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           + L  M + G+ PD +SYNT+I  F +  +M KAF L  KM    L P  +TYN+++ GF
Sbjct: 652 QLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGF 711

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           C  G + D++ +L  +  + +N ++  YTT+I  H ++ ++ +A  +  +M+++GF
Sbjct: 712 CVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGF 767



 Score =  285 bits (728), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 262/464 (56%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E++  G      T + +++  CR+   ++A        GK  +P V ++N++++  CK G
Sbjct: 236 EIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLG 295

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D AK     ML+ GL PD  +YN L+   C   +M EA ++  +M   G+ PD+V+++
Sbjct: 296 FVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYN 355

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            L   F   G ++ A    ++M   G  P+ V YT++I G+C+ G V EALK+  EM+  
Sbjct: 356 ILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISH 415

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  + +++   +L  LC+++ +  A  LF EM   G+ PD  T++TLIHG CK G + +A
Sbjct: 416 GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQA 475

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + L++ M    I P+ + +  ++ G C+ G++ +A   +  +I+  +S + I Y I+I+G
Sbjct: 476 ILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDG 535

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y   G+  EA +L+ ++  KGI PT+V+ N+++ G+C +   S+A   L  +   G++P+
Sbjct: 536 YIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPN 595

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +++Y TL+N +  E NM     L+S+M+ + + P  ITY V++ G C+Q ++ +S  +L 
Sbjct: 596 AVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLE 655

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            M   GL PD+ +Y T+I       ++++AF+ +D+ML     P
Sbjct: 656 DMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEP 699



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 254/472 (53%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           I+ A   + +M  KG  P+ VTY  LI  +C+ G +EEA +L   M   G +  + +   
Sbjct: 367 INGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTV 426

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+  LCK  + D A ++  EM   GL PD  TY+TL+   C++  + +A  ++ +M    
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR 486

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + P+ +    ++      G++ +A MYF  + ++ L  D +LY I+I+GY + G   EA+
Sbjct: 487 IIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAV 546

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+  ++ EKG    +VT+N+++ G C  + L++A  L + +   G+ P+  T+TTL++ +
Sbjct: 547 KLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVY 606

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C++GNM   L L   M  K+I P  +TY  +I G CK  +++++ +L  DM +  ++P+ 
Sbjct: 607 CEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQ 666

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +SY  +I  +C    + +AF+L+ +M+   ++PT V+ N +I G+C  GD   AD  L  
Sbjct: 667 VSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVS 726

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           + +  V+ +  +Y T+I     + ++DKA     +M  +G    +  Y+ ++   C++  
Sbjct: 727 LQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCL 786

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           + +++     M+  G+ PD+  +  L+N      +L   F    EM++ G++
Sbjct: 787 VTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 228/410 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LCK  ++D A    CEME  G+ PD +TY+TLI+  C++G +++A  L   M    
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR 486

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    + +++ GLC+KG+  +A+   D ++   LS D   YN ++    ++ N  EA 
Sbjct: 487 IIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAV 546

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ ++  +G++P IV+F++L+  F  N +L +A      +K  GL P+ V YT ++N Y
Sbjct: 547 KLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVY 606

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +   L++  EM  K      +TY  ++ GLC+   L E+  L  +M   G+ PD 
Sbjct: 607 CEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQ 666

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ T+I   CK  +M KA  L+D M   +++P  VTYN LI+GFC  G+++ A+ L   
Sbjct: 667 VSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVS 726

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +RK++ N  +Y  +I  +C+ G V +A   + +MV KG + ++   + +I   C+   
Sbjct: 727 LQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCL 786

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
            ++A  F   M+S+GV PD   +  L+N F +  +++  F L+++M   G
Sbjct: 787 VTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 183/381 (48%), Gaps = 67/381 (17%)

Query: 170 NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL----------------- 212
           NV++ ++   Y R+  V +AL +  +M +   ++ + TYN++L                 
Sbjct: 179 NVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIK 238

Query: 213 ---------------NGLCRAKMLTEADDLFNE--------------------------- 230
                          +GLCR     +A   F +                           
Sbjct: 239 VSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVD 298

Query: 231 --------MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
                   ML+ G+ PD Y++  LIHG C  G+M +AL+L + M    ++PD+VTYN L 
Sbjct: 299 VAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILA 358

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            GF  +G +  A  +   M+ +  +PN ++Y +LI G+C +G+V EA +L+ EM+  G +
Sbjct: 359 KGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQ 418

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
            +++S   ++   C+S     A +   +M + G+ PD I+Y+TLI+G  ++  + +A  L
Sbjct: 419 LSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILL 478

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             KM +  ++P+ + +  IL G C +G++  + +    +I   L+ D   Y  +I+G++ 
Sbjct: 479 YEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIK 538

Query: 463 QNNLKEAFRFHDEMLQRGFVP 483
           + N +EA + + ++ ++G  P
Sbjct: 539 RGNTREAVKLYKQLGEKGISP 559


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  298 bits (762), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 162/485 (33%), Positives = 259/485 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  + D ++ F  +M   G+     TYN +I+  C+EG LE A  L   M   G
Sbjct: 226 LLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG 285

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYNSLI+G  K G  D    + ++M      PD  TYN L+   C+ E M +A 
Sbjct: 286 FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 345

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   EM   G+ P++V++ST I  F + G L  A+ +F +M+   L P+   YT +I+  
Sbjct: 346 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 405

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EALK+ +E+L+ G  ++VVTY  +L+GLC    + EA+++F  ML  GV P+ 
Sbjct: 406 CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQ 465

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T L+HG  K   M  A ++   M +K IKPD++ Y T++ G C    +E+A  L  +
Sbjct: 466 ETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGE 525

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    I+ N + Y  L++ Y   G  TEA  L  EM+  G+  T V+   +I G C+SG 
Sbjct: 526 IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGL 585

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     +M   G+ P+   Y  L++G  +    + A  L  +M ++G++PD I Y  
Sbjct: 586 VQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTA 645

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + G + ++  +  RMIE G+  D   YT LI G      +++A    DEM+ +G
Sbjct: 646 LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKG 705

Query: 481 FVPDD 485
            +PD+
Sbjct: 706 VLPDE 710



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 249/482 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK+  ++ A+    +M++ G  PD VTYN+LI+ + + G L+E   +   M    
Sbjct: 261 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 320

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+LIN  CK  R  +A E L EM   GL P+  TY+T +   C++  + EA 
Sbjct: 321 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 380

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F +M R  + P+  ++++LI    + G L  AL    E+  AG+  + V YT +++G 
Sbjct: 381 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA ++   ML  G   +  TY  +++G  +AK +  A D+  EM E+ + PD 
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T++ G C +  + +A  L   + +  I  + V Y TL+D + K G+  +A  L  +
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   +    ++Y  LI+G C  G V EA   +  M   G++P +     ++ G C++  
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   +M+ +G+ PD I+Y  LI+G ++  N+ +A  L  +M   G+  D+  Y  
Sbjct: 621 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 680

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G    G++  +  +L  MI KG+ PD   Y  LI  + +   + EA    +EM +RG
Sbjct: 681 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740

Query: 481 FV 482
            +
Sbjct: 741 MI 742



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 245/457 (53%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++ L +A    G LEEA +    M    + P   + N+L++ L K GR D +++ 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M   G+     TYN ++   C++ ++  A  +F +M   G  PDIV++++LI    +
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G LD  +  F +MK A   PD + Y  +IN +C+   + +A +   EM   G   +VVT
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T ++  C+  ML EA   F +M    + P+ +T+T+LI  +CK GN+ +AL L + + 
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 422

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q  IK ++VTY  L+DG C+ G M++A +++  M++  ++PN  +Y  L++G+     + 
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  +  EM  K IKP L+   TI+ G C      +A   + ++   G++ +++ Y TL+
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 542

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           + + +     +A  L+ +M + GL+   +TY  ++ G C+ G + ++     RM E GL 
Sbjct: 543 DAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQ 602

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+ + YT L++G    N  + A +  DEML +G +PD
Sbjct: 603 PNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD 639



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 35/319 (10%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV     ++ + + L    ML EA + F +M +  VFP   +   L+H   K G  + + 
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSR 240

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING- 319
             F  M    IK  + TYN +ID  CK G++E A  L+  M     +P+ ++Y  LI+G 
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300

Query: 320 ----------------------------------YCSMGHVTEAFRLWYEMVGKGIKPTL 345
                                             +C    + +AF   +EM   G+KP +
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 360

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ +T I  +C+ G   +A +F   M    + P+  +Y +LI+   +  N+ +A  LV +
Sbjct: 361 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 420

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +   G+  +V+TY  +L G C +GRM ++E +   M+  G+ P++ TYT L++G +    
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           ++ A     EM ++   PD
Sbjct: 481 MEYAKDILKEMKEKCIKPD 499



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 2/227 (0%)

Query: 261 NLFDIM--TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           ++FD++  T+    P    ++ L     ++G +E+A++ +  M   ++ P   S   L++
Sbjct: 169 DVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLH 228

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
               +G    + + + +M   GIK ++ + N +I   C+ GD   A    ++M   G  P
Sbjct: 229 RLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTP 288

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D ++YN+LI+G  +   +D+   +  +M++    PDVITYN ++  FC+  RM  +   L
Sbjct: 289 DIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFL 348

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M   GL P+  TY+T I+    +  L+EA +F  +M +    P++
Sbjct: 349 HEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNE 395



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    ++  A+  L EM  KGV PD V Y  LI  Y   G ++EA +L N M+ +G
Sbjct: 681 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740

Query: 61  LKPGV 65
           +  G+
Sbjct: 741 MITGL 745


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  298 bits (762), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 157/464 (33%), Positives = 266/464 (57%), Gaps = 6/464 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + N LC  +++  A   +  + ++G  P+ VTY TLI   C E  + EA +L   M   G
Sbjct: 132 LANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLG 191

Query: 61  LKPGVFTYNSLINGLCKKGRCDRA----KEVLDEMLQMGLS--PDTATYNTLLVESCRKE 114
             P   TY +LI GLC+ G  + A    KE+L++  Q G++  P   TY+ ++   C+  
Sbjct: 192 CTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVG 251

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              EA+E+F EM  +G+ PD++S+STLI  F   G+ D++   F EM   G+ PD V ++
Sbjct: 252 REDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFS 311

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+  C+ G V EA K+ + M+++G V +++TYN++++G C    L  A +LF  M  +
Sbjct: 312 VLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSK 371

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G+ PD  ++TTLI+G+CK   + +A+NL++ M Q    P++ TY TL+ G  + G++  A
Sbjct: 372 GLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDA 431

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            KL+  M +  +S N   YGI ++G C    + EA  L+ E+     K  + + + +I G
Sbjct: 432 KKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDG 491

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C++G    A E   K+  EG+ PD ++YN +I+GF +   +D A  L  KME  G  PD
Sbjct: 492 LCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPD 551

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           +I YN +L GFC   ++ +   +L +M++K ++P+ ++ T +++
Sbjct: 552 IIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595



 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 160/500 (32%), Positives = 261/500 (52%), Gaps = 41/500 (8%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   ++N L+    +     + F L N M   GL P +FT + L N LC   R   A   
Sbjct: 89  PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           +  +L+ G  P+  TY TL+   C +  +SEA  +F  M + G  P+ V++ TLI    +
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208

Query: 148 NGQLDRALMYFREMKS------AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
            G ++ AL   +EM +          P  + Y+III+G C+ G   EA ++ +EM  +G 
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + DV++Y+T+++G C A    ++  LF+EM+++GV PD  TF+ LI   CK+G + +A  
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L ++M Q+ I P+++TYN+LIDGFC VG++  A +L+  M S+ + P+ ISY  LINGYC
Sbjct: 329 LLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYC 388

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
               V EA  L+ EM+  G  P + +  T++KG  + G    A +    M + GV  +S 
Sbjct: 389 KTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQ 448

Query: 382 -----------------------------------SYNTLINGFVREENMDKAFALVSKM 406
                                              +Y+ LI+G  +   ++ A+ L  K+
Sbjct: 449 IYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKL 508

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
             +GL PDV+TYN+++ GFC+ G++ ++ ++  +M E G  PD   Y TL+ G    N L
Sbjct: 509 SQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKL 568

Query: 467 KEAFRFHDEMLQRGFVPDDA 486
           +E  +   +M+Q+   P+ A
Sbjct: 569 EEVIKLLHKMVQKDVSPNAA 588



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 232/433 (53%), Gaps = 6/433 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM---- 56
           ++  LC +H+I  A      M++ G  P+ VTY TLI   C+ G +  A +L   M    
Sbjct: 167 LIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDA 226

Query: 57  --SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
              G   KPGV TY+ +I+GLCK GR D AKE+ +EM   G+ PD  +Y+TL+   C   
Sbjct: 227 SQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAG 286

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              +++ +F EM  +GV PD+V+FS LI    + G++  A      M   G+VP+ + Y 
Sbjct: 287 KWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYN 346

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I+G+C  G +  A ++   M  KG   D ++Y T++NG C+   + EA +L+NEML+ 
Sbjct: 347 SLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQV 406

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P+  T+ TL+ G  + G +  A  LF +M    +  +   Y   +DG CK   + +A
Sbjct: 407 GKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEA 466

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L+ ++ S     N  +Y  LI+G C  G +  A+ L+ ++  +G++P +V+ N +I G
Sbjct: 467 MELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHG 526

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           +C+ G    A+    KM   G  PD I+YNTL+ GF     +++   L+ KM  + + P+
Sbjct: 527 FCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPN 586

Query: 415 VITYNVILTGFCR 427
             +  +++   C+
Sbjct: 587 AASCTIVVDMLCK 599



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/452 (31%), Positives = 232/452 (51%), Gaps = 8/452 (1%)

Query: 41  CREGFLE--EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSP 98
           C+ G +   +AF   + M      P + ++N L+ GL K     +   + +EM   GLSP
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
           D  T + L    C    +SEA      + RRG  P++V+++TLI       ++  A   F
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG------CVMDVVTYNTIL 212
             M+  G  P+ V Y  +I G C+ G V  ALK+  EML         C   V+TY+ I+
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           +GLC+     EA +LF EM  +G+ PD  +++TLIHG C  G  +++ +LFD M  + ++
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           PD+VT++ LID  CK G++ +A KL   MI R I PN I+Y  LI+G+C +G +  A  L
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           +  M  KG++P  +S  T+I GYC++    +A    ++M+  G  P+  +Y TL+ G  +
Sbjct: 365 FLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQ 424

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +  +  A  L   M+  G+  +   Y + L G C+   + ++  +   +       +   
Sbjct: 425 KGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIEN 484

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y+ LI+G      L+ A+   +++ Q G  PD
Sbjct: 485 YSCLIDGLCKAGKLETAWELFEKLSQEGLQPD 516



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 233/415 (56%), Gaps = 6/415 (1%)

Query: 1   MVNALCKDHKIDSA----KMFLCEMEQKGV--YPDTVTYNTLINAYCREGFLEEAFQLMN 54
           ++  LC+   ++ A    K  L +  Q GV   P  +TY+ +I+  C+ G  +EA +L  
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261

Query: 55  SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
            M  +G+ P V +Y++LI+G C  G+ D++K + DEM+  G+ PD  T++ L+   C++ 
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            ++EA+++   M +RG+ P+++++++LI  F   G L+ A   F  M S GL PD + YT
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYT 381

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +INGYC+   V EA+ + +EML+ G   +V TY T+L GL +   + +A  LF  M   
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTY 441

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           GV  +   +   + G CK+  + +A+ LF+ +   + K +I  Y+ LIDG CK G++E A
Sbjct: 442 GVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETA 501

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L+  +    + P+ ++Y I+I+G+C +G V  A  L+ +M   G  P +++ NT++ G
Sbjct: 502 WELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCG 561

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +C      +  + L KMV + V P++ S   +++   ++E   K   L+ K   Q
Sbjct: 562 FCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQ 616



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 214/384 (55%), Gaps = 8/384 (2%)

Query: 105 TLLVESCRKENMS--EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
           +L + +C+  N++  +A   F  M R    P I SF+ L+G  ++     +    + EM+
Sbjct: 59  SLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMR 118

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
            AGL PD    +I+ N  C    V EAL     +L +G + +VVTY T++ GLC    ++
Sbjct: 119 LAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRIS 178

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS------IKPDIV 276
           EA  LF  M + G  P+  T+ TLI G C+ GN+N AL L   M   +       KP ++
Sbjct: 179 EATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVI 238

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TY+ +IDG CKVG  ++A +L+ +M ++ + P+ ISY  LI+G+C  G   ++  L+ EM
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           V +G++P +V+ + +I   C+ G  ++A + L  M+  G+ P+ I+YN+LI+GF    ++
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           + A  L   M ++GL PD I+Y  ++ G+C+  ++ ++  +   M++ G +P+ +TY TL
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418

Query: 457 INGHVSQNNLKEAFRFHDEMLQRG 480
           + G   +  + +A +    M   G
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYG 442


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  298 bits (762), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 172/484 (35%), Positives = 255/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ L K  + D A   L EM   G  PD  TYN LI+   + G L EAF L   M  +G
Sbjct: 85  LVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERG 144

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTYNSLI GL K GR  +A E+L+EM + G  PD  TY++L+    +     +A 
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAF 204

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM RRG  PD ++F+ L+    + G++D AL    EMK  G+ P  V Y  +I G+
Sbjct: 205 KLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGF 264

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G ++EA  + DEM   GC  DVVTY+ ++ GL +A  L EA  +  +M + G  PD 
Sbjct: 265 GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDT 324

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI+G  K G +N A  LFD M  K   PD+VTY+TLI    K   +E A  L+ +
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  I P+  +Y  +I      G V +A RL+ EM GKG+ P +++ N  +    R G 
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    M   G+ PD  +Y+ L+ G  + + +D A  L+ ++  QG   D + ++ 
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDE 504

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            L      G + ++  +L     KGL P  S+Y  LI+       + EAF   +++ ++G
Sbjct: 505 CLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564

Query: 481 FVPD 484
             PD
Sbjct: 565 GKPD 568



 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 163/480 (33%), Positives = 259/480 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NAL K  + + A++   E++     PD V+Y+ LIN+  R G  E A +++  M  KG
Sbjct: 15  LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP ++TYN+L++ L K G+ D A  +L EM   G  PD  TYN L+    +   +SEA 
Sbjct: 75  CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  RG  PD  ++++LI    + G+  +A+    EM+  G  PD + Y+ +I G 
Sbjct: 135 TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL 194

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G  ++A K+  EM  +G   D +T+  +++ L +A  + +A +L +EM ERGV P  
Sbjct: 195 GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGV 254

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G  K G++ +A NL D M +   KPD+VTY+ LI G  K  ++++A ++   
Sbjct: 255 VTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKK 314

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P+ I+Y  LING    G + +A RL+  M  KG  P +V+ +T+I    ++  
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M S G+ PD  +Y ++I    +   +D A  L S+M  +GL PDVITYN 
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            L    R GR  ++  I   M E GL PD +TY  L+ G      + +A     E++++G
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494



 Score =  287 bits (734), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 158/459 (34%), Positives = 246/459 (53%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ VTYN+L+NA  + G  EEA  L   +      P V +Y+ LIN L + G+ + A EV
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           + EM   G  P+  TYNTL+    +     EA  +  EM   G  PD+ +++ LI    +
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+L  A   F EM+  G VPD   Y  +I G  + G   +A+++ +EM   GC  DV+T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y++++ GL +     +A  LF EM  RG  PD  TFT L+    K G ++ AL L D M 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ +KP +VTYN LI GF KVG++ +A  L  +M      P+ ++Y  LI G      + 
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA ++  +M  +G  P  ++ NT+I G  ++G  + A     +M S+G +PD ++Y+TLI
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
               +   ++ A  L  +ME+ G+ PD+ TY  I+T   + G++ D++ +   M  KGL+
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           PD  TY   +N        KEA +  ++M + G +PD A
Sbjct: 427 PDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVA 465



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 142/388 (36%), Positives = 216/388 (55%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           SP+  TYN+LL    +     EA+ +F E+      PD+VS+S LI    R G+ + AL 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
              EM++ G  P+   Y  +++   + G   EAL++  EM + GCV DV TYN +++ L 
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
           +A  L+EA  LF EM ERG  PD +T+ +LI+G  K G   KA+ L + M +    PD++
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TY++LI G  K GE  KA KL+ +M  R   P+ I++  L++     G V +A  L  EM
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
             +G+KP +V+ N +I G+ + GD  +A   L +M   G  PD ++Y+ LI G ++   +
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           D+A  ++ KME +G  PD ITYN ++ G  + G ++D+  +  RM  KG NPD  TY+TL
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           I        ++ A    +EM   G  PD
Sbjct: 366 ITALGKAARVESACVLFEEMESVGIQPD 393



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 218/411 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L KD +   A     EM+++G  PD++T+  L++A  + G +++A +L++ M  +G
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KPGV TYN+LI G  K G    A  +LDEM + G  PD  TY+ L+    +   + EA 
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M + G  PD ++++TLI    + G L+ A   F  MKS G  PD V Y+ +I   
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL 369

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   V  A  + +EM   G   D+ TY +I+  L +A  + +AD LF+EM  +G+ PD 
Sbjct: 370 GKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDV 429

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+   ++   + G   +A  +F+ M +  + PD+ TY+ L+ G  K  E++ A  L  +
Sbjct: 430 ITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKE 489

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +I +  + + + +   +    S G+V EA  L      KG+ P   S N +I    ++G 
Sbjct: 490 LIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGR 549

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
            S+A   L  +  +G  PD +SY++LI+   +   +D AF L+ +M  +GL
Sbjct: 550 VSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/387 (33%), Positives = 207/387 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL K  ++D A   L EM+++GV P  VTYN LI  + + G L EA+ L++ M   G
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY+ LI GL K  + D A +VL +M + G  PDT TYNTL+    +   +++A 
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG 344

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M  +G  PD+V++STLI    +  +++ A + F EM+S G+ PD   Y  II   
Sbjct: 345 RLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V +A ++  EM  KG   DV+TYN  LN L R     EA  +F +M E G+ PD 
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L+ G  K   ++ A  L   + ++    D + ++  ++     G +++A++L   
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQF 524

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
             S+ + P   SY  LI+     G V+EAF    ++  +G KP +VS +++I    ++G 
Sbjct: 525 ANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQ 584

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLI 387
              A E L +M   G+     SY+ L+
Sbjct: 585 IDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 173/337 (51%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            L EM++ G  PD VTY+ LI    +   L+EA Q++  M  +G  P   TYN+LINGL 
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG 335

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K G  + A  + D M   G +PD  TY+TL+    +   +  A  +F EM   G+ PD+ 
Sbjct: 336 KAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLF 395

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++ ++I +  + GQ+D A   F EM+  GL PD + Y   +N   R G   EA K+ ++M
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM 455

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
            E G + DV TY+ +L GL + K + +A  L  E++E+G   D   F   +      GN+
Sbjct: 456 KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNV 515

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A  L      K + P   +YN LID   K G + +A     D+  +   P+ +SY  L
Sbjct: 516 DEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSL 575

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           I+     G +  AF L  EM  +G+K +  S + +++
Sbjct: 576 ISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVR 612



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 111/215 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K  ++D A     EM  KG+ PD +TYN  +N+  R G  +EA ++   M   G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY++L+ GL K    D A  +L E+++ G + D+  ++  L       N+ EA 
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAH 519

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+    + +G+ P   S++ LI   ++ G++  A     ++K  G  PD V Y+ +I+  
Sbjct: 520 ELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISAL 579

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            + G +  A ++ +EM ++G  +   +Y+ ++  L
Sbjct: 580 GQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  297 bits (761), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 264/514 (51%), Gaps = 32/514 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A   L +M  +G  P  VTY  L+ A C+     +A ++++ M  KG
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 210

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +ING+C++GR D A+E L+ +   G  PDT +Y T+L   C  +   + E
Sbjct: 211 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 270

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F EM  +   P+ V+F  L+  F R G ++RA+    +M   G   +  L  I+IN  
Sbjct: 271 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A +  + M   GC  D ++Y T+L GLCRA+   +A +L  EM+ +   P+ 
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG----------- 289
            TF T I   C+ G + +A  L + M++   + +IVTYN L++GFC  G           
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450

Query: 290 ---------------------EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                                 ++ A +L A+M+ +  +PN +++ +L++ +C  G + E
Sbjct: 451 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  +M+  G  P L++ NT++ G  +  ++ +A E L  +VS GV PD ++Y+++I 
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              RE+ +++A  +   +++ G+ P  + YN IL   C++     +      M+  G  P
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 630

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +  TY TLI G  +++ LKE      E+  RG +
Sbjct: 631 NELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 244/484 (50%), Gaps = 6/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  +   A   L   E+ G   D   YNTL+  YCR G L+ A +L+ SM    
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--- 140

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TY  +I GLC +GR   A  +LD+ML  G  P   TY  LL   C+     +A 
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +G  P+IV+++ +I    R G++D A  +   + S G  PD V YT ++ G 
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +  ++  EM+EK C+ + VT++ ++   CR  M+  A  +  +M   G   + 
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                +I+  CK G ++ A    + M      PD ++Y T++ G C+    E A +L  +
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   PN +++   I   C  G + +A  L  +M   G +  +V+ N ++ G+C  G 
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E    M  +   P++I+Y TL+ G    E +D A  L+++M  +   P+V+T+NV
Sbjct: 441 VDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++ FC++G M ++  ++ +M+E G  P+  TY TL++G     N +EA      ++  G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557

Query: 481 FVPD 484
             PD
Sbjct: 558 VSPD 561



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 223/439 (50%), Gaps = 6/439 (1%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L EA +L++  + +G  P V+    LI  LC++GR   A  VL    + G + D   YNT
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   CR   +  A  +   M    VAPD  +++ +I      G++  AL    +M   G
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P  V YT+++   C++    +A+++ DEM  KGC  ++VTYN I+NG+CR   + +A 
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +  N +   G  PD  ++TT++ G C          LF  M +K+  P+ VT++ L+  F
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C+ G +E+A ++   M     + N     I+IN  C  G V +AF+    M   G  P  
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           +S  T++KG CR+     A E L +MV +   P+ +++NT I    ++  +++A  L+ +
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M   G   +++TYN ++ GFC QGR+  +  + + M  K   P+  TYTTL+ G  +   
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           L  A     EMLQ+   P+
Sbjct: 473 LDAAAELLAEMLQKDCAPN 491



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 206/408 (50%), Gaps = 3/408 (0%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N+ +  L  +     A  ++D     G +PD      L+   CR+   S+A  +     R
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G A D+ +++TL+  + R GQLD A    R + S  + PD   YT II G C  G V E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAAR---RLIASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           AL + D+ML +GC   VVTY  +L  +C++    +A ++ +EM  +G  P+  T+  +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G C++G ++ A    + ++    +PD V+Y T++ G C     E   +L+A+M+ +   P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N +++ +L+  +C  G V  A ++  +M G G       CN +I   C+ G    A +FL
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           + M S G  PD+ISY T++ G  R E  + A  L+ +M  +   P+ +T+N  +   C++
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           G +  + +++ +M E G   +  TY  L+NG   Q  +  A      M
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 186/384 (48%), Gaps = 5/384 (1%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           SP+ A  N  L     +++++EA  +    + RG APD+   + LI    R G+   A  
Sbjct: 42  SPNPA--NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR 99

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
             R  + +G   D   Y  ++ GYCR G +  A ++   M       D  TY  I+ GLC
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLC 156

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
               + EA  L ++ML RG  P   T+T L+   CK     +A+ + D M  K   P+IV
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TYN +I+G C+ G ++ A +    + S    P+ +SY  ++ G C+     +   L+ EM
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           + K   P  V+ + +++ +CR G   +A + L +M   G   ++   N +IN   ++  +
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           D AF  ++ M + G  PD I+Y  +L G CR  R  D++ +L  M+ K   P+  T+ T 
Sbjct: 337 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 396

Query: 457 INGHVSQNNLKEAFRFHDEMLQRG 480
           I     +  +++A    ++M + G
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHG 420



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 163/323 (50%), Gaps = 3/323 (0%)

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
           S G  PD  L T +I   CR G   +A ++       G  +DV  YNT++ G CR   L 
Sbjct: 71  SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLD 130

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
            A  L   M    V PD YT+T +I G C  G + +AL+L D M  +  +P +VTY  L+
Sbjct: 131 AARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 187

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +  CK     +A ++  +M ++  +PN ++Y ++ING C  G V +A      +   G +
Sbjct: 188 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQ 247

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P  VS  T++KG C +      +E  ++M+ +   P+ ++++ L+  F R   +++A  +
Sbjct: 248 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           + +M   G   +    N+++   C+QGR+ D+   L  M   G +PD  +YTT++ G   
Sbjct: 308 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367

Query: 463 QNNLKEAFRFHDEMLQRGFVPDD 485
               ++A     EM+++   P++
Sbjct: 368 AERWEDAKELLKEMVRKNCPPNE 390



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 90/172 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C+   +D A   + +M + G  P+ +TYNTL++   ++   EEA +L++ +   G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY+S+I  L ++ R + A ++   +  +G+ P    YN +L+  C++ N   A 
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           + F  M   G  P+ +++ TLI   +    L       RE+ S G++  N+L
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLL 669


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  297 bits (761), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 163/469 (34%), Positives = 254/469 (54%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL EM ++ + PD  T+N LIN  C EG  E++  LM  M   G  P + TYN++++  C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           KKGR   A E+LD M   G+  D  TYN L+ + CR   +++   +  +M +R + P+ V
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TLI  FS  G++  A     EM S GL P++V +  +I+G+   G   EALKM   M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             KG     V+Y  +L+GLC+      A   +  M   GV     T+T +I G CK+G +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A+ L + M++  I PDIVTY+ LI+GFCKVG  + A ++   +    +SPN I Y  L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I   C MG + EA R++  M+ +G      + N ++   C++G  ++A+EF+  M S+G+
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+++S++ LING+       KAF++  +M   G  P   TY  +L G C+ G + ++E 
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            L  +       D   Y TL+       NL +A     EM+QR  +PD 
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648



 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 256/480 (53%), Gaps = 1/480 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK  +  +A   L  M+ KGV  D  TYN LI+  CR   + + + L+  M  + + P  
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TYN+LING   +G+   A ++L+EML  GLSP+  T+N L+     + N  EA ++F  
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  +G+ P  VS+  L+    +N + D A  ++  MK  G+    + YT +I+G C+NGF
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + EA+ + +EM + G   D+VTY+ ++NG C+      A ++   +   G+ P+   ++T
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI+  C+ G + +A+ +++ M  +    D  T+N L+   CK G++ +A +    M S  
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I PN +S+  LINGY + G   +AF ++ EM   G  PT  +  +++KG C+ G   +A+
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +FL  + +     D++ YNTL+    +  N+ KA +L  +M  + ++PD  TY  +++G 
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 426 CRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           CR+G+   + L       +G + P++  YT  ++G       K    F ++M   G  PD
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718



 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 277/558 (49%), Gaps = 73/558 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ + D A+ F   M++ GV    +TY  +I+  C+ GFL+EA  L+N MS  G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY++LING CK GR   AKE++  + ++GLSP+   Y+TL+   CR   + EA 
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I+  M   G   D  +F+ L+    + G++  A  + R M S G++P+ V +  +INGY
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553

Query: 181 CRNGFVLEALKMRDEMLEKG-----------------------------------CVMDV 205
             +G  L+A  + DEM + G                                     +D 
Sbjct: 554 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 613

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-- 263
           V YNT+L  +C++  L +A  LF EM++R + PD YT+T+LI G C+ G    A+ LF  
Sbjct: 614 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAK 672

Query: 264 ------DIMTQKSI-----------------------------KPDIVTYNTLIDGFCKV 288
                 +++  K +                              PDIVT N +IDG+ ++
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G++EK N L  +M ++   PN  +Y IL++GY     V+ +F L+  ++  GI P  ++C
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           ++++ G C S       + L   +  GV+ D  ++N LI+       ++ AF LV  M +
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            G+  D  T + +++   R  R  +S ++L  M ++G++P+   Y  LING     ++K 
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912

Query: 469 AFRFHDEMLQRGFVPDDA 486
           AF   +EM+     P + 
Sbjct: 913 AFVVKEEMIAHKICPPNV 930



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 246/485 (50%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N    + K+  A   L EM   G+ P+ VT+N LI+ +  EG  +EA ++   M  KG
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   +Y  L++GLCK    D A+     M + G+     TY  ++   C+   + EA 
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EMS+ G+ PDIV++S LI  F + G+   A      +   GL P+ ++Y+ +I   
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EA+++ + M+ +G   D  T+N ++  LC+A  + EA++    M   G+ P+ 
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +F  LI+G+   G   KA ++FD MT+    P   TY +L+ G CK G + +A K    
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +   + + + Y  L+   C  G++ +A  L+ EMV + I P   +  ++I G CR G 
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663

Query: 361 ASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A  F  +  + G V P+ + Y   ++G  +            +M+N G  PD++T N
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+ R G++  +  +L  M  +   P+ +TY  L++G+  + ++  +F  +  ++  
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783

Query: 480 GFVPD 484
           G +PD
Sbjct: 784 GILPD 788



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 234/452 (51%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            Y+ LI  Y REG ++++ ++   M   G  P V+T N+++  + K G        L EM
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           L+  + PD AT+N L+   C + +  ++  +  +M + G AP IV+++T++  + + G+ 
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
             A+     MKS G+  D   Y ++I+  CR+  + +   +  +M ++    + VTYNT+
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           +NG      +  A  L NEML  G+ P+  TF  LI GH  +GN  +AL +F +M  K +
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P  V+Y  L+DG CK  E + A   +  M    +    I+Y  +I+G C  G + EA  
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L  EM   GI P +V+ + +I G+C+ G    A E + ++   G+ P+ I Y+TLI    
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           R   + +A  +   M  +G   D  T+NV++T  C+ G++ ++E  +  M   G+ P+  
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           ++  LING+ +     +AF   DEM + G  P
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 576



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 250/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V +LCK  K+  A+ F+  M   G+ P+TV+++ LIN Y   G   +AF + + M+  G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY SL+ GLCK G    A++ L  +  +  + DT  YNTLL   C+  N+++A 
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIING 179
            +F EM +R + PD  ++++LI    R G+   A+++ +E ++ G ++P+ V+YT  ++G
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDG 693

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G     +  R++M   G   D+VT N +++G  R   + + +DL  EM  +   P+
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+HG+ K  +++ +  L+  +    I PD +T ++L+ G C+   +E   K+  
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             I R +  +  ++ +LI+  C+ G +  AF L   M   GI     +C+ ++    R+ 
Sbjct: 814 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 873

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              ++   L +M  +G+ P+S  Y  LING  R  ++  AF +  +M    + P  +  +
Sbjct: 874 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES 933

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++    + G+  ++ L+L  M++  L P  +++TTL++      N+ EA      M   
Sbjct: 934 AMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 993

Query: 480 GFVPD 484
           G   D
Sbjct: 994 GLKLD 998



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 209/386 (54%)

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
           + + Y+ L+    R+  + ++ EIF  M   G  P + + + ++G   ++G+      + 
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
           +EM    + PD   + I+IN  C  G   ++  +  +M + G    +VTYNT+L+  C+ 
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
                A +L + M  +GV  D  T+  LIH  C+   + K   L   M ++ I P+ VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           NTLI+GF   G++  A++L  +M+S  +SPN++++  LI+G+ S G+  EA +++Y M  
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           KG+ P+ VS   ++ G C++ +   A  F  +M   GV    I+Y  +I+G  +   +D+
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  L+++M   G+ PD++TY+ ++ GFC+ GR   ++ I+ R+   GL+P+   Y+TLI 
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
                  LKEA R ++ M+  G   D
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRD 507



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 195/430 (45%), Gaps = 36/430 (8%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG-------FLEEAFQLM 53
            ++ A+CK   +  A     EM Q+ + PD+ TY +LI+  CR+G       F +EA    
Sbjct: 619  LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 54   NSMSGK-----------------------------GLKPGVFTYNSLINGLCKKGRCDRA 84
            N +  K                             G  P + T N++I+G  + G+ ++ 
Sbjct: 679  NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738

Query: 85   KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             ++L EM      P+  TYN LL    +++++S +  ++  +   G+ PD ++  +L+  
Sbjct: 739  NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798

Query: 145  FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
               +  L+  L   +     G+  D   + ++I+  C NG +  A  +   M   G  +D
Sbjct: 799  ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858

Query: 205  VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
              T + +++ L R     E+  + +EM ++G+ P+   +  LI+G C+ G++  A  + +
Sbjct: 859  KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918

Query: 265  IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
             M    I P  V  + ++    K G+ ++A  L   M+  K+ P   S+  L++  C  G
Sbjct: 919  EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978

Query: 325  HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +V EA  L   M   G+K  LVS N +I G C  GD + A E   +M  +G   ++ +Y 
Sbjct: 979  NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038

Query: 385  TLINGFVREE 394
             LI G +  E
Sbjct: 1039 ALIRGLLARE 1048



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 128/245 (52%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  LI  + ++G +  +L +F +M      P + T N ++    K GE         +M
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           + RKI P+  ++ ILIN  C+ G   ++  L  +M   G  PT+V+ NT++  YC+ G  
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A E L  M S+GVD D  +YN LI+   R   + K + L+  M  + + P+ +TYN +
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + GF  +G++  +  +L  M+  GL+P+  T+  LI+GH+S+ N KEA +    M  +G 
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364

Query: 482 VPDDA 486
            P + 
Sbjct: 365 TPSEV 369



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 4/299 (1%)

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++ FV  AL     +    C  +   Y+ ++    R  M+ ++ ++F  M   G  P  Y
Sbjct: 104 KSSFVFGALMTTYRL----CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 159

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T   ++    K G      +    M ++ I PD+ T+N LI+  C  G  EK++ L   M
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 219

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
                +P  ++Y  +++ YC  G    A  L   M  KG+   + + N +I   CRS   
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           +K    L  M    + P+ ++YNTLINGF  E  +  A  L+++M + GL P+ +T+N +
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + G   +G   ++  + + M  KGL P   +Y  L++G         A  F+  M + G
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 92/183 (50%)

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R  + N   Y ILI  Y   G + ++  ++  M   G  P++ +CN I+    +SG+   
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
              FL +M+   + PD  ++N LIN    E + +K+  L+ KME  G  P ++TYN +L 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +C++GR   +  +L  M  KG++ D  TY  LI+     N + + +    +M +R   P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296

Query: 484 DDA 486
           ++ 
Sbjct: 297 NEV 299


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  297 bits (761), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 163/469 (34%), Positives = 254/469 (54%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL EM ++ + PD  T+N LIN  C EG  E++  LM  M   G  P + TYN++++  C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           KKGR   A E+LD M   G+  D  TYN L+ + CR   +++   +  +M +R + P+ V
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TLI  FS  G++  A     EM S GL P++V +  +I+G+   G   EALKM   M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             KG     V+Y  +L+GLC+      A   +  M   GV     T+T +I G CK+G +
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A+ L + M++  I PDIVTY+ LI+GFCKVG  + A ++   +    +SPN I Y  L
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I   C MG + EA R++  M+ +G      + N ++   C++G  ++A+EF+  M S+G+
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+++S++ LING+       KAF++  +M   G  P   TY  +L G C+ G + ++E 
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 639

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            L  +       D   Y TL+       NL +A     EM+QR  +PD 
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688



 Score =  281 bits (718), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 256/480 (53%), Gaps = 1/480 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK  +  +A   L  M+ KGV  D  TYN LI+  CR   + + + L+  M  + + P  
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TYN+LING   +G+   A ++L+EML  GLSP+  T+N L+     + N  EA ++F  
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  +G+ P  VS+  L+    +N + D A  ++  MK  G+    + YT +I+G C+NGF
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + EA+ + +EM + G   D+VTY+ ++NG C+      A ++   +   G+ P+   ++T
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI+  C+ G + +A+ +++ M  +    D  T+N L+   CK G++ +A +    M S  
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I PN +S+  LINGY + G   +AF ++ EM   G  PT  +  +++KG C+ G   +A+
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +FL  + +     D++ YNTL+    +  N+ KA +L  +M  + ++PD  TY  +++G 
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698

Query: 426 CRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           CR+G+   + L       +G + P++  YT  ++G       K    F ++M   G  PD
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758



 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 166/557 (29%), Positives = 277/557 (49%), Gaps = 73/557 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ + D A+ F   M++ GV    +TY  +I+  C+ GFL+EA  L+N MS  G
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY++LING CK GR   AKE++  + ++GLSP+   Y+TL+   CR   + EA 
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I+  M   G   D  +F+ L+    + G++  A  + R M S G++P+ V +  +INGY
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593

Query: 181 CRNGFVLEALKMRDEMLEKG-----------------------------------CVMDV 205
             +G  L+A  + DEM + G                                     +D 
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-- 263
           V YNT+L  +C++  L +A  LF EM++R + PD YT+T+LI G C+ G    A+ LF  
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAK 712

Query: 264 ------DIMTQKSI-----------------------------KPDIVTYNTLIDGFCKV 288
                 +++  K +                              PDIVT N +IDG+ ++
Sbjct: 713 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G++EK N L  +M ++   PN  +Y IL++GY     V+ +F L+  ++  GI P  ++C
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 832

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           ++++ G C S       + L   +  GV+ D  ++N LI+       ++ AF LV  M +
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            G+  D  T + +++   R  R  +S ++L  M ++G++P+   Y  LING     ++K 
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952

Query: 469 AFRFHDEMLQRGFVPDD 485
           AF   +EM+     P +
Sbjct: 953 AFVVKEEMIAHKICPPN 969



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 246/485 (50%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N    + K+  A   L EM   G+ P+ VT+N LI+ +  EG  +EA ++   M  KG
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   +Y  L++GLCK    D A+     M + G+     TY  ++   C+   + EA 
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EMS+ G+ PDIV++S LI  F + G+   A      +   GL P+ ++Y+ +I   
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EA+++ + M+ +G   D  T+N ++  LC+A  + EA++    M   G+ P+ 
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +F  LI+G+   G   KA ++FD MT+    P   TY +L+ G CK G + +A K    
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +   + + + Y  L+   C  G++ +A  L+ EMV + I P   +  ++I G CR G 
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703

Query: 361 ASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A  F  +  + G V P+ + Y   ++G  +            +M+N G  PD++T N
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+ R G++  +  +L  M  +   P+ +TY  L++G+  + ++  +F  +  ++  
Sbjct: 764 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 823

Query: 480 GFVPD 484
           G +PD
Sbjct: 824 GILPD 828



 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 234/452 (51%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            Y+ LI  Y REG ++++ ++   M   G  P V+T N+++  + K G        L EM
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           L+  + PD AT+N L+   C + +  ++  +  +M + G AP IV+++T++  + + G+ 
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
             A+     MKS G+  D   Y ++I+  CR+  + +   +  +M ++    + VTYNT+
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           +NG      +  A  L NEML  G+ P+  TF  LI GH  +GN  +AL +F +M  K +
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P  V+Y  L+DG CK  E + A   +  M    +    I+Y  +I+G C  G + EA  
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L  EM   GI P +V+ + +I G+C+ G    A E + ++   G+ P+ I Y+TLI    
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           R   + +A  +   M  +G   D  T+NV++T  C+ G++ ++E  +  M   G+ P+  
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           ++  LING+ +     +AF   DEM + G  P
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 250/485 (51%), Gaps = 1/485 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V +LCK  K+  A+ F+  M   G+ P+TV+++ LIN Y   G   +AF + + M+  G
Sbjct: 554  LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P  FTY SL+ GLCK G    A++ L  +  +  + DT  YNTLL   C+  N+++A 
Sbjct: 614  HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 673

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIING 179
             +F EM +R + PD  ++++LI    R G+   A+++ +E ++ G ++P+ V+YT  ++G
Sbjct: 674  SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDG 733

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
              + G     +  R++M   G   D+VT N +++G  R   + + +DL  EM  +   P+
Sbjct: 734  MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 793

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              T+  L+HG+ K  +++ +  L+  +    I PD +T ++L+ G C+   +E   K+  
Sbjct: 794  LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 853

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
              I R +  +  ++ +LI+  C+ G +  AF L   M   GI     +C+ ++    R+ 
Sbjct: 854  AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 913

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               ++   L +M  +G+ P+S  Y  LING  R  ++  AF +  +M    + P  +  +
Sbjct: 914  RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES 973

Query: 420  VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             ++    + G+  ++ L+L  M++  L P  +++TTL++      N+ EA      M   
Sbjct: 974  AMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 1033

Query: 480  GFVPD 484
            G   D
Sbjct: 1034 GLKLD 1038



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 209/386 (54%)

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
           + + Y+ L+    R+  + ++ EIF  M   G  P + + + ++G   ++G+      + 
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
           +EM    + PD   + I+IN  C  G   ++  +  +M + G    +VTYNT+L+  C+ 
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
                A +L + M  +GV  D  T+  LIH  C+   + K   L   M ++ I P+ VTY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           NTLI+GF   G++  A++L  +M+S  +SPN++++  LI+G+ S G+  EA +++Y M  
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           KG+ P+ VS   ++ G C++ +   A  F  +M   GV    I+Y  +I+G  +   +D+
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  L+++M   G+ PD++TY+ ++ GFC+ GR   ++ I+ R+   GL+P+   Y+TLI 
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
                  LKEA R ++ M+  G   D
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRD 547



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 195/430 (45%), Gaps = 36/430 (8%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG-------FLEEAFQLM 53
            ++ A+CK   +  A     EM Q+ + PD+ TY +LI+  CR+G       F +EA    
Sbjct: 659  LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718

Query: 54   NSMSGK-----------------------------GLKPGVFTYNSLINGLCKKGRCDRA 84
            N +  K                             G  P + T N++I+G  + G+ ++ 
Sbjct: 719  NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778

Query: 85   KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             ++L EM      P+  TYN LL    +++++S +  ++  +   G+ PD ++  +L+  
Sbjct: 779  NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838

Query: 145  FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
               +  L+  L   +     G+  D   + ++I+  C NG +  A  +   M   G  +D
Sbjct: 839  ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898

Query: 205  VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
              T + +++ L R     E+  + +EM ++G+ P+   +  LI+G C+ G++  A  + +
Sbjct: 899  KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958

Query: 265  IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
             M    I P  V  + ++    K G+ ++A  L   M+  K+ P   S+  L++  C  G
Sbjct: 959  EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 1018

Query: 325  HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +V EA  L   M   G+K  LVS N +I G C  GD + A E   +M  +G   ++ +Y 
Sbjct: 1019 NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1078

Query: 385  TLINGFVREE 394
             LI G +  E
Sbjct: 1079 ALIRGLLARE 1088



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 128/244 (52%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  LI  + ++G +  +L +F +M      P + T N ++    K GE         +M
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           + RKI P+  ++ ILIN  C+ G   ++  L  +M   G  PT+V+ NT++  YC+ G  
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A E L  M S+GVD D  +YN LI+   R   + K + L+  M  + + P+ +TYN +
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + GF  +G++  +  +L  M+  GL+P+  T+  LI+GH+S+ N KEA +    M  +G 
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404

Query: 482 VPDD 485
            P +
Sbjct: 405 TPSE 408



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 4/299 (1%)

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++ FV  AL     +    C  +   Y+ ++    R  M+ ++ ++F  M   G  P  Y
Sbjct: 144 KSSFVFGALMTTYRL----CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 199

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T   ++    K G      +    M ++ I PD+ T+N LI+  C  G  EK++ L   M
Sbjct: 200 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 259

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
                +P  ++Y  +++ YC  G    A  L   M  KG+   + + N +I   CRS   
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           +K    L  M    + P+ ++YNTLINGF  E  +  A  L+++M + GL P+ +T+N +
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + G   +G   ++  + + M  KGL P   +Y  L++G         A  F+  M + G
Sbjct: 380 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 92/182 (50%)

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R  + N   Y ILI  Y   G + ++  ++  M   G  P++ +CN I+    +SG+   
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
              FL +M+   + PD  ++N LIN    E + +K+  L+ KME  G  P ++TYN +L 
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +C++GR   +  +L  M  KG++ D  TY  LI+     N + + +    +M +R   P
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336

Query: 484 DD 485
           ++
Sbjct: 337 NE 338


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  297 bits (761), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 163/469 (34%), Positives = 254/469 (54%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL EM ++ + PD  T+N LIN  C EG  E++  LM  M   G  P + TYN++++  C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           KKGR   A E+LD M   G+  D  TYN L+ + CR   +++   +  +M +R + P+ V
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TLI  FS  G++  A     EM S GL P++V +  +I+G+   G   EALKM   M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             KG     V+Y  +L+GLC+      A   +  M   GV     T+T +I G CK+G +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A+ L + M++  I PDIVTY+ LI+GFCKVG  + A ++   +    +SPN I Y  L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I   C MG + EA R++  M+ +G      + N ++   C++G  ++A+EF+  M S+G+
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+++S++ LING+       KAF++  +M   G  P   TY  +L G C+ G + ++E 
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            L  +       D   Y TL+       NL +A     EM+QR  +PD 
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648



 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 256/480 (53%), Gaps = 1/480 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK  +  +A   L  M+ KGV  D  TYN LI+  CR   + + + L+  M  + + P  
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TYN+LING   +G+   A ++L+EML  GLSP+  T+N L+     + N  EA ++F  
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  +G+ P  VS+  L+    +N + D A  ++  MK  G+    + YT +I+G C+NGF
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + EA+ + +EM + G   D+VTY+ ++NG C+      A ++   +   G+ P+   ++T
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI+  C+ G + +A+ +++ M  +    D  T+N L+   CK G++ +A +    M S  
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I PN +S+  LINGY + G   +AF ++ EM   G  PT  +  +++KG C+ G   +A+
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +FL  + +     D++ YNTL+    +  N+ KA +L  +M  + ++PD  TY  +++G 
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 426 CRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           CR+G+   + L       +G + P++  YT  ++G       K    F ++M   G  PD
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718



 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 277/558 (49%), Gaps = 73/558 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ + D A+ F   M++ GV    +TY  +I+  C+ GFL+EA  L+N MS  G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY++LING CK GR   AKE++  + ++GLSP+   Y+TL+   CR   + EA 
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I+  M   G   D  +F+ L+    + G++  A  + R M S G++P+ V +  +INGY
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553

Query: 181 CRNGFVLEALKMRDEMLEKG-----------------------------------CVMDV 205
             +G  L+A  + DEM + G                                     +D 
Sbjct: 554 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 613

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-- 263
           V YNT+L  +C++  L +A  LF EM++R + PD YT+T+LI G C+ G    A+ LF  
Sbjct: 614 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAK 672

Query: 264 ------DIMTQKSI-----------------------------KPDIVTYNTLIDGFCKV 288
                 +++  K +                              PDIVT N +IDG+ ++
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G++EK N L  +M ++   PN  +Y IL++GY     V+ +F L+  ++  GI P  ++C
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           ++++ G C S       + L   +  GV+ D  ++N LI+       ++ AF LV  M +
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            G+  D  T + +++   R  R  +S ++L  M ++G++P+   Y  LING     ++K 
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912

Query: 469 AFRFHDEMLQRGFVPDDA 486
           AF   +EM+     P + 
Sbjct: 913 AFVVKEEMIAHKICPPNV 930



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 246/485 (50%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N    + K+  A   L EM   G+ P+ VT+N LI+ +  EG  +EA ++   M  KG
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   +Y  L++GLCK    D A+     M + G+     TY  ++   C+   + EA 
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EMS+ G+ PDIV++S LI  F + G+   A      +   GL P+ ++Y+ +I   
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EA+++ + M+ +G   D  T+N ++  LC+A  + EA++    M   G+ P+ 
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +F  LI+G+   G   KA ++FD MT+    P   TY +L+ G CK G + +A K    
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +   + + + Y  L+   C  G++ +A  L+ EMV + I P   +  ++I G CR G 
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663

Query: 361 ASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A  F  +  + G V P+ + Y   ++G  +            +M+N G  PD++T N
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+ R G++  +  +L  M  +   P+ +TY  L++G+  + ++  +F  +  ++  
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783

Query: 480 GFVPD 484
           G +PD
Sbjct: 784 GILPD 788



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 234/452 (51%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            Y+ LI  Y REG ++++ ++   M   G  P V+T N+++  + K G        L EM
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           L+  + PD AT+N L+   C + +  ++  +  +M + G AP IV+++T++  + + G+ 
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
             A+     MKS G+  D   Y ++I+  CR+  + +   +  +M ++    + VTYNT+
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           +NG      +  A  L NEML  G+ P+  TF  LI GH  +GN  +AL +F +M  K +
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P  V+Y  L+DG CK  E + A   +  M    +    I+Y  +I+G C  G + EA  
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L  EM   GI P +V+ + +I G+C+ G    A E + ++   G+ P+ I Y+TLI    
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           R   + +A  +   M  +G   D  T+NV++T  C+ G++ ++E  +  M   G+ P+  
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           ++  LING+ +     +AF   DEM + G  P
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 576



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 250/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V +LCK  K+  A+ F+  M   G+ P+TV+++ LIN Y   G   +AF + + M+  G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY SL+ GLCK G    A++ L  +  +  + DT  YNTLL   C+  N+++A 
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIING 179
            +F EM +R + PD  ++++LI    R G+   A+++ +E ++ G ++P+ V+YT  ++G
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDG 693

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G     +  R++M   G   D+VT N +++G  R   + + +DL  EM  +   P+
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+HG+ K  +++ +  L+  +    I PD +T ++L+ G C+   +E   K+  
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             I R +  +  ++ +LI+  C+ G +  AF L   M   GI     +C+ ++    R+ 
Sbjct: 814 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 873

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              ++   L +M  +G+ P+S  Y  LING  R  ++  AF +  +M    + P  +  +
Sbjct: 874 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES 933

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++    + G+  ++ L+L  M++  L P  +++TTL++      N+ EA      M   
Sbjct: 934 AMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 993

Query: 480 GFVPD 484
           G   D
Sbjct: 994 GLKLD 998



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 210/388 (54%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           + + + Y+ L+    R+  + ++ EIF  M   G  P + + + ++G   ++G+      
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           + +EM    + PD   + I+IN  C  G   ++  +  +M + G    +VTYNT+L+  C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
           +      A +L + M  +GV  D  T+  LIH  C+   + K   L   M ++ I P+ V
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TYNTLI+GF   G++  A++L  +M+S  +SPN++++  LI+G+ S G+  EA +++Y M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
             KG+ P+ VS   ++ G C++ +   A  F  +M   GV    I+Y  +I+G  +   +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           D+A  L+++M   G+ PD++TY+ ++ GFC+ GR   ++ I+ R+   GL+P+   Y+TL
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           I        LKEA R ++ M+  G   D
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRD 507



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 195/430 (45%), Gaps = 36/430 (8%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG-------FLEEAFQLM 53
            ++ A+CK   +  A     EM Q+ + PD+ TY +LI+  CR+G       F +EA    
Sbjct: 619  LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 54   NSMSGK-----------------------------GLKPGVFTYNSLINGLCKKGRCDRA 84
            N +  K                             G  P + T N++I+G  + G+ ++ 
Sbjct: 679  NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738

Query: 85   KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             ++L EM      P+  TYN LL    +++++S +  ++  +   G+ PD ++  +L+  
Sbjct: 739  NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798

Query: 145  FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
               +  L+  L   +     G+  D   + ++I+  C NG +  A  +   M   G  +D
Sbjct: 799  ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858

Query: 205  VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
              T + +++ L R     E+  + +EM ++G+ P+   +  LI+G C+ G++  A  + +
Sbjct: 859  KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918

Query: 265  IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
             M    I P  V  + ++    K G+ ++A  L   M+  K+ P   S+  L++  C  G
Sbjct: 919  EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978

Query: 325  HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +V EA  L   M   G+K  LVS N +I G C  GD + A E   +M  +G   ++ +Y 
Sbjct: 979  NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038

Query: 385  TLINGFVREE 394
             LI G +  E
Sbjct: 1039 ALIRGLLARE 1048



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 128/245 (52%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  LI  + ++G +  +L +F +M      P + T N ++    K GE         +M
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           + RKI P+  ++ ILIN  C+ G   ++  L  +M   G  PT+V+ NT++  YC+ G  
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A E L  M S+GVD D  +YN LI+   R   + K + L+  M  + + P+ +TYN +
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + GF  +G++  +  +L  M+  GL+P+  T+  LI+GH+S+ N KEA +    M  +G 
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364

Query: 482 VPDDA 486
            P + 
Sbjct: 365 TPSEV 369



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 130/280 (46%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  +   Y+ ++    R  M+ ++ ++F  M   G  P  YT   ++    K G      
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +    M ++ I PD+ T+N LI+  C  G  EK++ L   M     +P  ++Y  +++ Y
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G    A  L   M  KG+   + + N +I   CRS   +K    L  M    + P+ 
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YNTLINGF  E  +  A  L+++M + GL P+ +T+N ++ G   +G   ++  + + 
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           M  KGL P   +Y  L++G         A  F+  M + G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 92/183 (50%)

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R  + N   Y ILI  Y   G + ++  ++  M   G  P++ +CN I+    +SG+   
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
              FL +M+   + PD  ++N LIN    E + +K+  L+ KME  G  P ++TYN +L 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +C++GR   +  +L  M  KG++ D  TY  LI+     N + + +    +M +R   P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296

Query: 484 DDA 486
           ++ 
Sbjct: 297 NEV 299


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  297 bits (761), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 165/487 (33%), Positives = 270/487 (55%), Gaps = 5/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC  +++DSA   L +M + G  P+ + Y TLI+A  + G + E  +L+  M   G
Sbjct: 223 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMG 282

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+N  I+GLCK  R   A +++D ML  G +P++ TY  L+   CR   + EA 
Sbjct: 283 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEAR 342

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-MKSAGLVPDNVLYTIIING 179
            +  ++      P++V F+TLI  +   G+LD A     E M S G  PD   Y  +I G
Sbjct: 343 MLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 398

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G+++ A ++ +EM  KGC  +V+TY  +++  C+   L EA ++ +EM  +G+  +
Sbjct: 399 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 458

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  LI   CKD  +  ALN+F  M+ K  KPDI T+N+LI G CKV + E+A  L+ 
Sbjct: 459 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 518

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM+   +  N I+Y  LI+ +   G + EA +L  +M+ +G     ++ N +IK  CR+G
Sbjct: 519 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 578

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  K       M+S+G++P++IS N LING  R  N+  A   +  M ++GL PD++TYN
Sbjct: 579 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 638

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+ GR  ++  +  ++  +G+ PD  TY TLI+ H  +    +A       +  
Sbjct: 639 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 698

Query: 480 GFVPDDA 486
           GF+P++ 
Sbjct: 699 GFIPNEV 705



 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 154/429 (35%), Positives = 248/429 (57%), Gaps = 5/429 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ LCK  +I  A   +  M  +G  P++ TY  L++  CR G ++EA  L+N +     
Sbjct: 294 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP---- 349

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDE-MLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            P V  +N+LING   +GR D AK V+ E ML +G  PD  TYNTL++  C+K  +  A 
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +G  P++++++ LI  F + G+L+ A     EM   GL  + V Y  +I+  
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 469

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  V +AL M  +M  KGC  D+ T+N+++ GLC+     EA  L+ +ML  GV  + 
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 529

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIH   + G M +AL L + M  +    D +TYN LI   C+ G +EK   L+ D
Sbjct: 530 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 589

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+ ++PN IS  ILING C  G++  A     +M+ +G+ P +V+ N++I G C++G 
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 649

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A +A     K+  EG+ PD+I+YNTLI+   +E   D A  L+S+  + G +P+ +T+ +
Sbjct: 650 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 709

Query: 421 ILTGFCRQG 429
           +++ F ++G
Sbjct: 710 LVSNFIKEG 718



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 224/394 (56%), Gaps = 5/394 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMN-SMSGK 59
           +++ LC+  K+D A+M L ++      P+ V +NTLIN Y   G L+EA  +M+ SM   
Sbjct: 328 LMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 383

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P +FTYN+LI GLCKKG    A+E+++EM   G  P+  TY  L+   C++  + EA
Sbjct: 384 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 443

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EMS +G+A + V ++ LI    ++ ++  AL  F +M S G  PD   +  +I G
Sbjct: 444 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 503

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+     EAL +  +ML +G + + +TYNT+++   R   + EA  L N+ML RG   D
Sbjct: 504 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 563

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  LI   C+ GN+ K L LF+ M  K + P+ ++ N LI+G C+ G ++ A +   
Sbjct: 564 DITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 623

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DMI R ++P+ ++Y  LING C  G   EA  L+ ++  +GI P  ++ NT+I  +C+ G
Sbjct: 624 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 683

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
               A   LS+ V  G  P+ +++  L++ F++E
Sbjct: 684 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 717



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 244/547 (44%), Gaps = 82/547 (14%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLI 72
           S ++F     QKG       Y  LI+     G  +    L+  M  +G+   VF  +  I
Sbjct: 94  SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGI---VFRESLFI 150

Query: 73  NGLCKKGRCDRAKEVLDEMLQM----GLSPDTATYNT----LLVESCRKENMSEAEEIFC 124
             +   GR     +    +L M       P   +YN     LL  +C K        +F 
Sbjct: 151 LIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKV----VPNVFY 206

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM  +G++P + +F  ++       ++D A    ++M   G VP+ ++Y  +I+   + G
Sbjct: 207 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVG 266

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V E LK+ +EML  GC+ DV T+N  ++GLC+   + EA  L + ML RG  P+ +T+ 
Sbjct: 267 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 326

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSI--------------------------------K 272
            L+HG C+ G +++A  L + +   ++                                 
Sbjct: 327 VLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG 386

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           PDI TYNTLI G CK G +  A +L  +M  +   PN I+Y ILI+ +C  G + EA  +
Sbjct: 387 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 446

Query: 333 WYEMVGKGI-----------------------------------KPTLVSCNTIIKGYCR 357
             EM GKG+                                   KP + + N++I G C+
Sbjct: 447 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 506

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
                +A      M+ EGV  ++I+YNTLI+ F+R   M +A  LV+ M  +G   D IT
Sbjct: 507 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 566

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN ++   CR G +     +   M+ KGLNP+  +   LING     N++ A  F  +M+
Sbjct: 567 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 626

Query: 478 QRGFVPD 484
            RG  PD
Sbjct: 627 HRGLTPD 633


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  297 bits (760), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 268/496 (54%), Gaps = 16/496 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G  PD VT++TL++  C E  + EA  L + M    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC--- 174

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T+ +L+NGLC++GR   A  +LD M++ GL P+  TY T++   C+  +   A 
Sbjct: 175 -RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M     + P++V +S +I    ++G+   A   + EM+  G+ PD   Y  +I+G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   EA ++  EMLE+    +VVTY+ ++N   + +   EA++L++EML RG+ P+
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ ++I G CK   ++ A ++F +M  K   PD+ T+NTLIDG+C    ++   +L  
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    +  +  +Y  LI+G+C +G +  A  L  +M+  G+ P +V+CNT++ G C +G
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473

Query: 360 DASKADEFLSKMVSE-----------GVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
               A E    M              GV+PD  +YN LI+G + E    +A  L  +M +
Sbjct: 474 KLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPH 533

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+VP+ ITY+ ++ G C+Q R+ ++  +   M  K  +PD  T+ TL++G+     + +
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593

Query: 469 AFRFHDEMLQRGFVPD 484
                 EM +RG V D
Sbjct: 594 GLELFCEMGRRGIVAD 609



 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/488 (31%), Positives = 262/488 (53%), Gaps = 12/488 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
           ++N LC++ ++  A   L  M + G+ P+ +TY T+++  C+ G    A  L+  M    
Sbjct: 184 LMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMS 243

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +KP V  Y+++I+GL K GR   A  +  EM + G+ PD  TYN ++   C     SEA
Sbjct: 244 HIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEA 303

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +  EM  R + P++V++S LI  + +  +   A   + EM   G++P+ + Y  +I+G
Sbjct: 304 QRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDG 363

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +  A  M   M  KGC  DV T+NT+++G C AK + +  +L +EM E G+  D
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD 423

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIHG C  G++N AL+L   M    + PDIVT NTL+DG C  G+++ A +++ 
Sbjct: 424 TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 483

Query: 300 DMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            M   K           + P+  +Y ILI+G  + G   EA  L+ EM  +GI P  ++ 
Sbjct: 484 AMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITY 543

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G C+     +A +    M S+   PD +++NTL++G+ +   +D    L  +M  
Sbjct: 544 SSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGR 603

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+V D ITY  ++ GF + G ++ +  I   MI  G+ PD  T  +++    S+  LK 
Sbjct: 604 RGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKR 663

Query: 469 AFRFHDEM 476
           A    +++
Sbjct: 664 AVAMLEDL 671



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 259/487 (53%), Gaps = 18/487 (3%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ++ A     +M +    P  + +N L+    R    +    L   M  K +   V+++N 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI   C   +   A     ++ ++G  PD  T++TLL   C ++ +SEA ++F +M R  
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR-- 175

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P++V+F+TL+    R G++  A+     M   GL P+ + Y  I++G C+ G  + AL
Sbjct: 176 --PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 191 KMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            +  +M E   +  +VV Y+ I++GL +    ++A +L+ EM E+G+FPD +T+  +I G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C  G  ++A  L   M ++ I P++VTY+ LI+ + K  +  +A +L+ +M+ R I PN
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            I+Y  +I+G+C    +  A  ++Y M  KG  P + + NT+I GYC +       E L 
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M   G+  D+ +YNTLI+GF    +++ A  L  +M + G+ PD++T N +L G C  G
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473

Query: 430 RMHDSELILWRMIEK------------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           ++ D+ L +++ ++K            G+ PD  TY  LI+G +++    EA   + EM 
Sbjct: 474 KLKDA-LEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMP 532

Query: 478 QRGFVPD 484
            RG VP+
Sbjct: 533 HRGIVPN 539



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 234/418 (55%), Gaps = 11/418 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L KD +   A     EM++KG++PD  TYN +I+ +C  G   EA +L+  M  + 
Sbjct: 255 IIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK 314

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY++LIN   K+ +   A+E+ DEML  G+ P+T TYN+++   C++  +  AE
Sbjct: 315 INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAE 374

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+ +G +PD+ +F+TLI  +    ++D       EM   GLV D   Y  +I+G+
Sbjct: 375 HMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGF 434

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
           C  G +  AL +  +M+  G   D+VT NT+L+GLC    L +A ++F  M +       
Sbjct: 435 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 494

Query: 235 -----GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                GV PD  T+  LI G   +G   +A  L+  M  + I P+ +TY+++I+G CK  
Sbjct: 495 SRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQS 554

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A +++  M S+  SP+ +++  L++GYC  G V +   L+ EM  +GI    ++  
Sbjct: 555 RLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYI 614

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           T+I G+ + G+ + A +   +M+S GV PD+I+  +++     +E + +A A++  ++
Sbjct: 615 TLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 211/372 (56%), Gaps = 5/372 (1%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +A ++F +M R    P ++ F+ L+G+  R  + D  +  +++M+   +  D   +
Sbjct: 56  KGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSF 115

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            I+I  +C    +  AL    ++ + G   DVVT++T+L+GLC    ++EA DLF++M  
Sbjct: 116 NILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR 175

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
               P+  TFTTL++G C++G + +A+ L D M +  ++P+ +TY T++DG CK+G+   
Sbjct: 176 ----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVS 231

Query: 294 ANKLWADMIS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           A  L   M     I PN + Y  +I+G    G  ++A  L+ EM  KGI P L + N +I
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMI 291

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G+C SG  S+A   L +M+   ++P+ ++Y+ LIN +V+E    +A  L  +M  +G++
Sbjct: 292 DGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGII 351

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+ ITYN ++ GFC+Q R+  +E + + M  KG +PD  T+ TLI+G+     + +    
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTEL 411

Query: 473 HDEMLQRGFVPD 484
             EM + G V D
Sbjct: 412 LHEMTETGLVAD 423



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 153/308 (49%), Gaps = 40/308 (12%)

Query: 213 NGLCRAKMLTEADDLFNEM----------------------------------LERGVFP 238
           +G    K L +A DLF++M                                  +ER   P
Sbjct: 50  SGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIP 109

Query: 239 -DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            D Y+F  LI   C    +  AL+ F  +T+   +PD+VT++TL+ G C    + +A  L
Sbjct: 110 CDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDL 169

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  M      PN +++  L+NG C  G V EA  L   MV  G++P  ++  TI+ G C+
Sbjct: 170 FHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 225

Query: 358 SGDASKADEFLSKMVS-EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
            GD   A   L KM     + P+ + Y+ +I+G  ++     A  L ++M+ +G+ PD+ 
Sbjct: 226 IGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLF 285

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN ++ GFC  GR  +++ +L  M+E+ +NP+  TY+ LIN +V +    EA   +DEM
Sbjct: 286 TYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEM 345

Query: 477 LQRGFVPD 484
           L RG +P+
Sbjct: 346 LPRGIIPN 353



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 94/179 (52%), Gaps = 4/179 (2%)

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           L  GF ++  +E A  L++DM+  +  P+ I +  L+     M        L+ +M  K 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           I   + S N +IK +C       A     K+   G  PD ++++TL++G   E+ + +A 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            L  +M      P+V+T+  ++ G CR+GR+ ++  +L RM+E GL P++ TY T+++G
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 222


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  297 bits (760), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 156/478 (32%), Positives = 257/478 (53%), Gaps = 3/478 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L ++ +++    FL  M  +G  PD +   +LI  +CR G  ++A  +M  +   G  P 
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V TYN LI+G CK G  D A +VLD   +M ++PD  TYNT+L   C    + +A E+  
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
              ++   PD+++++ LI    +   + +A+    EM++ G  PD V Y ++ING C+ G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA+K  + M   GC  +V+T+N IL  +C      +A+ L ++ML +G  P   TF 
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI+  C+ G + +A+++ + M      P+ ++YN L+ GFCK  +M++A +    M+SR
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y  L+   C  G V  A  +  ++  KG  P L++ NT+I G  + G   +A
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            + L +M  +G+ PD I+Y++L++G  RE  +D+A      +E  G+ P+ ITYN I+ G
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            C+  +   +   L  MI K   P  +TYT LI G   +   KEA    +E+  RG V
Sbjct: 484 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541



 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 143/446 (32%), Positives = 249/446 (55%), Gaps = 3/446 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  K   A   +  +EQ G  PD +TYN LI+ YC+ G ++ A Q+++ M+   
Sbjct: 98  LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN--- 154

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+++  LC  G+  +A EVLD  LQ    PD  TY  L+  +C++  + +A 
Sbjct: 155 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 214

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  +G  PD+V+++ LI    + G+LD A+ +   M S G  P+ + + II+   
Sbjct: 215 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  ++A K+  +ML KGC   VVT+N ++N LCR  +L  A D+  +M   G  P+ 
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  L+HG CK+  M++A+   DIM  +   PDIVTYNTL+   CK G+++ A ++   
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+  SP  I+Y  +I+G   +G    A +L  EM  KG+KP +++ ++++ G  R G 
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +F   +   G+ P++I+YN+++ G  +    D+A   ++ M ++   P   TY +
Sbjct: 455 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 514

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           ++ G   +G   ++  +L  +  +GL
Sbjct: 515 LIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 134/359 (37%), Positives = 210/359 (58%), Gaps = 3/359 (0%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  RG  PDI+  ++LI  F R G+  +A      ++ +G VPD + Y ++I+GYC++G 
Sbjct: 83  MVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGE 142

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           +  AL++ D M       DVVTYNTIL  LC +  L +A ++ +  L++  +PD  T+T 
Sbjct: 143 IDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTI 199

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI   CK+  + +A+ L D M  K  KPD+VTYN LI+G CK G +++A K   +M S  
Sbjct: 200 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 259

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             PN I++ I++   CS G   +A +L  +M+ KG  P++V+ N +I   CR G   +A 
Sbjct: 260 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 319

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           + L KM   G  P+S+SYN L++GF +E+ MD+A   +  M ++G  PD++TYN +LT  
Sbjct: 320 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 379

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+ G++  +  IL ++  KG +P   TY T+I+G       + A +  DEM ++G  PD
Sbjct: 380 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 438


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  297 bits (760), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 262/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K+  A   + ++ + G  PDTV +NTL+N  C E  + EA +L++ M   G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + T N+L+NGLC  G+   A  ++D M++ G  P+  TY  +L   C+    + A 
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M  R +  D V +S +I    ++G LD A   F EM+  G   D + Y  +I G+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +  K+  +M+++    +VVT++ +++   +   L EAD L  EM++RG+ P+ 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G CK+  + +A+ + D+M  K   PDI+T+N LI+G+CK   ++   +L+ +
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  N ++Y  L+ G+C  G +  A +L+ EMV + ++P +VS   ++ G C +G+
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E   K+    ++ D   Y  +I+G      +D A+ L   +  +G+  D   YN+
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++  CR+  +  ++++  +M E+G  PD  TY  LI  H+  ++   A    +EM   G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608

Query: 481 FVPD 484
           F  D
Sbjct: 609 FPAD 612



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/422 (33%), Positives = 234/422 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LC + K+  A + +  M + G  P+ VTY  ++N  C+ G    A +L+  M  + 
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y+ +I+GLCK G  D A  + +EM   G   D  TYNTL+   C      +  
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M +R ++P++V+FS LI  F + G+L  A    +EM   G+ P+ + Y  +I+G+
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA++M D M+ KGC  D++T+N ++NG C+A  + +  +LF EM  RGV  + 
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TL+ G C+ G +  A  LF  M  + ++PDIV+Y  L+DG C  GE+EKA +++  
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+  +   Y I+I+G C+   V +A+ L+  +  KG+K    + N +I   CR   
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            SKAD    KM  EG  PD ++YN LI   + +++   A  L+ +M++ G   DV T  +
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618

Query: 421 IL 422
           ++
Sbjct: 619 VI 620



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 244/461 (52%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K D A     +M Q    P  + +N L +A  +    E    L   M  KG+   ++T +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            +IN  C+  +   A   + +++++G  PDT  +NTLL   C +  +SEA E+   M   
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  P +++ +TL+     NG++  A++    M   G  P+ V Y  ++N  C++G    A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           +++  +M E+   +D V Y+ I++GLC+   L  A +LFNEM  +G   D  T+ TLI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C  G  +    L   M ++ I P++VT++ LID F K G++ +A++L  +M+ R I+PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            I+Y  LI+G+C    + EA ++   M+ KG  P +++ N +I GYC++       E   
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M   GV  ++++YNTL+ GF +   ++ A  L  +M ++ + PD+++Y ++L G C  G
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
            +  +  I  ++ +  +  D   Y  +I+G  + + + +A+
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 224/400 (56%), Gaps = 1/400 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N +CK  +   A   L +ME++ +  D V Y+ +I+  C++G L+ AF L N M  KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  + TYN+LI G C  GR D   ++L +M++  +SP+  T++ L+    ++  + EA+
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM +RG+AP+ +++++LI  F +  +L+ A+     M S G  PD + + I+INGY
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + + L++  EM  +G + + VTYNT++ G C++  L  A  LF EM+ R V PD 
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  L+ G C +G + KAL +F  + +  ++ DI  Y  +I G C   +++ A  L+  
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + +  +  +Y I+I+  C    +++A  L+ +M  +G  P  ++ N +I+ +    D
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           A+ A E + +M S G   D  +   +IN     E +DK+F
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE-LDKSF 632



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 76/159 (47%)

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ +M+     PT++  N +     ++           +M S+G+     + + +I
Sbjct: 71  DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           N F R   +  AF+ + K+   G  PD + +N +L G C + R+ ++  ++ RM+E G  
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P   T  TL+NG      + +A    D M++ GF P++ 
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  297 bits (760), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 154/487 (31%), Positives = 254/487 (52%), Gaps = 2/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC   ++  A     +M  +G  P  VTY+ L++A C+     +A  L++ M  KG
Sbjct: 168 LIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKG 227

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TYN LIN +C +G  D A  +L ++   G  PD  TY  +L   C  E   E E
Sbjct: 228 CEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVE 287

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F EM+    APD V+F+T++    + G +DRA+     M   G +PD V Y+ I++G 
Sbjct: 288 ELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGL 347

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A+++   +   GC  D + Y T+L GLC  +    A++L  EM+     PD 
Sbjct: 348 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDE 407

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF T+I   C+ G +++A+ + + M++    PDIVTYN++IDG C    ++ A +L ++
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S    P+ +++  L+ G CS+    +A +L   M+     P   + NT+I   C+ G 
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L  M   G  P+  +YN +++  ++     +A  L+S M N    PD+ITYN 
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNT 585

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++   + G+M ++  +L  M+  GL+PD  TY +L  G   ++    A R    +   G
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645

Query: 481 FVPDDAF 487
             PD  F
Sbjct: 646 LSPDATF 652



 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 238/472 (50%), Gaps = 6/472 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A+     +   G     VTYNT++N YCR G +E+A +L+   SG  
Sbjct: 104 LIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLI---SGMP 157

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FT+N LI  LC +GR   A  V D+ML  G SP   TY+ LL  +C+     +A 
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G  PDIV+++ LI      G +D AL    ++ S G  PD V YT ++   
Sbjct: 218 VLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSL 277

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +    E  ++  EM    C  D VT+NTI+  LC+  ++  A  + + M E G  PD 
Sbjct: 278 CGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDI 337

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++++ G C  G ++ A+ L   +     KPD + Y T++ G C + + E A +L A+
Sbjct: 338 VTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAE 397

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     P+ +++  +I   C  G V  A ++  +M   G  P +V+ N+II G C    
Sbjct: 398 MVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERC 457

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E LS + S G  PD +++NTL+ G    +  + A  L+  M +    PD  T+N 
Sbjct: 458 IDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNT 517

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           ++T  C++G +  +   L  M E G  P++STY  +++  +     +EA + 
Sbjct: 518 VITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKL 569



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 244/456 (53%), Gaps = 6/456 (1%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           V  N LI   C  G + +A ++  ++   G    V TYN+++NG C+ GR + A+ ++  
Sbjct: 99  VPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLIS- 154

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
              M   PDT T+N L+   C +  + +A  +F +M  RG +P +V++S L+    +   
Sbjct: 155 --GMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASG 212

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
             +A++   EM++ G  PD V Y ++IN  C  G V EAL +  ++   GC  D VTY  
Sbjct: 213 YRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTP 272

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +L  LC ++   E ++LF EM      PD  TF T++   C+ G +++A+ + D M++  
Sbjct: 273 VLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHG 332

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
             PDIVTY++++DG C VG ++ A +L + + S    P+ I+Y  ++ G CS+     A 
Sbjct: 333 CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAE 392

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L  EMV     P  V+ NT+I   C+ G   +A + + +M   G +PD ++YN++I+G 
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
             E  +D A  L+S +++ G  PD++T+N +L G C   R  D+E ++  M+     PD 
Sbjct: 453 CNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDA 512

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +T+ T+I     +  L +A      M + G +P+ +
Sbjct: 513 TTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQS 548



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 227/446 (50%), Gaps = 2/446 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC   +    +    EM      PD VT+NT++ + C++G ++ A ++++ MS  G
Sbjct: 273 VLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHG 332

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY+S+++GLC  GR D A E+L  +   G  PDT  Y T+L   C  E    AE
Sbjct: 333 CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAE 392

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM      PD V+F+T+I    + G +DRA+    +M   G  PD V Y  II+G 
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + +A+++   +   GC  D+VT+NT+L GLC      +A+ L   M+     PD 
Sbjct: 453 CNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDA 512

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF T+I   C+ G + +A+    IM +    P+  TYN ++D   K G+ ++A KL + 
Sbjct: 513 TTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSG 572

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +   +P+ I+Y  +I+     G + EA  L   MV  G+ P  ++  ++  G CR   
Sbjct: 573 MTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDG 630

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L ++   G+ PD+  YN ++ GF +    D A    + M + G +PD  TY +
Sbjct: 631 TDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYII 690

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           +L     +  + +++ +L  +   G+
Sbjct: 691 LLEALAYECLLDEAKQLLVNLCSLGV 716



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 80/167 (47%), Gaps = 2/167 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+AL K  K   A   L  M      PD +TYNT+I+   + G +EEA  L+  M   G
Sbjct: 553 VVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNG 610

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TY SL  G+C++   DRA  +L  +  MGLSPD   YN +L+  C+      A 
Sbjct: 611 LSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAI 670

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
           + F  M   G  PD  ++  L+   +    LD A      + S G++
Sbjct: 671 DCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVL 717



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 6/147 (4%)

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
           GK +   +V CN +IK  C  G  + A+   + +   G     ++YNT++NG+ R   ++
Sbjct: 91  GKCLPLPVVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIE 147

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            A  L+S M      PD  T+N ++   C +GR+ D+  +   M+ +G +P   TY+ L+
Sbjct: 148 DARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILL 204

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +     +  ++A    DEM  +G  PD
Sbjct: 205 DATCKASGYRQAMVLLDEMRAKGCEPD 231


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  297 bits (760), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 154/497 (30%), Positives = 270/497 (54%), Gaps = 15/497 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCRE----------GFLEEAF 50
           ++   C  HK+  +     ++ + G  PD VT+NTL++  C E          G++ E  
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 51  QLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES 110
            L + M   GL P V T+N+LINGLC +GR   A  ++++M+  GL  D  TY T++   
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           C+  +   A  +  +M    + PD+V +S +I    ++G    A   F EM   G+ P+ 
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
             Y  +I+G+C  G   +A ++  +M+E+    DV+T+N +++   +   L EA+ L +E
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 386

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           ML R +FPD  T+ ++I+G CK    + A ++FD+M      PD+VT+NT+ID +C+   
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKR 442

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           +++  +L  ++  R +  N  +Y  LI+G+C + ++  A  L+ EM+  G+ P  ++CN 
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++ G+C +    +A E    +    +D D+++YN +I+G  +   +D+A+ L   +   G
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 562

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           + PDV TYNV+++GFC +  + D+ ++  +M + G  PD STY TLI G +    + ++ 
Sbjct: 563 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 622

Query: 471 RFHDEMLQRGFVPDDAF 487
               EM   GF   DAF
Sbjct: 623 ELISEMRSNGF-SGDAF 638



 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 237/434 (54%), Gaps = 5/434 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + ++  A   + +M  KG++ D VTY T++N  C+ G  + A  L++ M    
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V  Y+++I+ LCK G    A+ +  EML+ G++P+  TYN ++   C     S+A+
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 346

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + PD+++F+ LI    + G+L  A     EM    + PD V Y  +I G+
Sbjct: 347 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 406

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++    +A  M D M       DVVT+NTI++  CRAK + E   L  E+  RG+  + 
Sbjct: 407 CKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 462

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIHG C+  N+N A +LF  M    + PD +T N L+ GFC+  ++E+A +L+  
Sbjct: 463 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 522

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   KI  + ++Y I+I+G C    V EA+ L+  +   G++P + + N +I G+C    
Sbjct: 523 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 582

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A+    KM   G +PD+ +YNTLI G ++   +DK+  L+S+M + G   D  T  +
Sbjct: 583 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 642

Query: 421 ILTGFCRQGRMHDS 434
           +       GR+  S
Sbjct: 643 V-ADLITDGRLDKS 655



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 260/496 (52%), Gaps = 14/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++    + ++ D A     +ME + +  +  ++N LI  +C    L  +      ++  G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 61  LKPGVFTYNSLINGLCKKGRCDRA----------KEVLDEMLQMGLSPDTATYNTLLVES 110
            +P V T+N+L++GLC + R   A            + D+M+++GL+P   T+NTL+   
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGL 231

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           C +  + EA  +  +M  +G+  D+V++ T++    + G    AL    +M+   + PD 
Sbjct: 232 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 291

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           V+Y+ II+  C++G   +A  +  EMLEKG   +V TYN +++G C     ++A  L  +
Sbjct: 292 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 351

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           M+ER + PD  TF  LI    K+G + +A  L D M  + I PD VTYN++I GFCK   
Sbjct: 352 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 411

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
            + A  ++ D+++   SP+ +++  +I+ YC    V E  +L  E+  +G+     + NT
Sbjct: 412 FDDAKHMF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 467

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I G+C   + + A +   +M+S GV PD+I+ N L+ GF   E +++A  L   ++   
Sbjct: 468 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 527

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           +  D + YN+I+ G C+  ++ ++  +   +   G+ PD  TY  +I+G   ++ + +A 
Sbjct: 528 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 587

Query: 471 RFHDEMLQRGFVPDDA 486
               +M   G  PD++
Sbjct: 588 VLFHKMKDNGHEPDNS 603



 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 231/433 (53%), Gaps = 4/433 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M + G+ P  +T+NTLIN  C EG + EA  L+N M GKGL   V TY +++NG+CK G
Sbjct: 211 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 270

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
               A  +L +M +  + PD   Y+ ++   C+  + S+A+ +F EM  +G+AP++ +++
Sbjct: 271 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 330

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            +I  F   G+   A    R+M    + PD + +  +I+   + G + EA K+ DEML +
Sbjct: 331 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 390

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               D VTYN+++ G C+     +A  +F+ M      PD  TF T+I  +C+   +++ 
Sbjct: 391 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEG 446

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + L   ++++ +  +  TYNTLI GFC+V  +  A  L+ +MIS  + P+ I+  IL+ G
Sbjct: 447 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 506

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C    + EA  L+  +    I    V+ N II G C+     +A +    +   GV+PD
Sbjct: 507 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 566

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN +I+GF  +  +  A  L  KM++ G  PD  TYN ++ G  + G +  S  ++ 
Sbjct: 567 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 626

Query: 440 RMIEKGLNPDRST 452
            M   G + D  T
Sbjct: 627 EMRSNGFSGDAFT 639



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 228/462 (49%), Gaps = 29/462 (6%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A  F   M +   +   V  N +I  + R    + A  L   M  + +   ++++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI   C   +   +     ++ ++G  PD  T+NTLL   C ++ +SEA  +F       
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF------- 199

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
                       G     G L      F +M   GL P  + +  +ING C  G VLEA 
Sbjct: 200 ------------GYMVETGSL------FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 241

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            + ++M+ KG  +DVVTY TI+NG+C+      A +L ++M E  + PD   ++ +I   
Sbjct: 242 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 301

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CKDG+ + A  LF  M +K I P++ TYN +IDGFC  G    A +L  DMI R+I+P+ 
Sbjct: 302 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 361

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +++  LI+     G + EA +L  EM+ + I P  V+ N++I G+C+      A      
Sbjct: 362 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 421

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M S    PD +++NT+I+ + R + +D+   L+ ++  +GLV +  TYN ++ GFC    
Sbjct: 422 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 477

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           ++ ++ +   MI  G+ PD  T   L+ G      L+EA   
Sbjct: 478 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 519



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 206/382 (53%), Gaps = 16/382 (4%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL- 172
           +++ +A + F  M R       V  + +IG+F R  + D A+  +R+M+    +P N+  
Sbjct: 85  KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKME-IRRIPLNIYS 143

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA-------- 224
           + I+I  +C    +  +L    ++ + G   DVVT+NT+L+GLC    ++EA        
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203

Query: 225 --DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
               LF++M+E G+ P   TF TLI+G C +G + +A  L + M  K +  D+VTY T++
Sbjct: 204 ETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 263

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +G CK+G+ + A  L + M    I P+ + Y  +I+  C  GH ++A  L+ EM+ KGI 
Sbjct: 264 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 323

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P + + N +I G+C  G  S A   L  M+   ++PD +++N LI+  V+E  + +A  L
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 383

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M ++ + PD +TYN ++ GFC+  R  D++     M +   +PD  T+ T+I+ +  
Sbjct: 384 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCR 439

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
              + E  +   E+ +RG V +
Sbjct: 440 AKRVDEGMQLLREISRRGLVAN 461



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 167/303 (55%), Gaps = 8/303 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K+ K+  A+    EM  + ++PDTVTYN++I  +C+    ++A  + + M+   
Sbjct: 367 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 424

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+N++I+  C+  R D   ++L E+ + GL  +T TYNTL+   C  +N++ A+
Sbjct: 425 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 482

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM   GV PD ++ + L+  F  N +L+ AL  F  ++ + +  D V Y III+G 
Sbjct: 483 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 542

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA  +   +   G   DV TYN +++G C    +++A+ LF++M + G  PD 
Sbjct: 543 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 602

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G  K G ++K++ L   M       D  T   + D     G ++K+   ++D
Sbjct: 603 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS---FSD 658

Query: 301 MIS 303
           M+S
Sbjct: 659 MLS 661


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 264/514 (51%), Gaps = 32/514 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A   L +M  +G  P  VTY  L+ A C+     +A ++++ M  KG
Sbjct: 182 IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 241

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +ING+C++GR D A+E L+ +   G  PDT +Y T+L   C  +   + E
Sbjct: 242 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 301

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F EM  +   P+ V+F  L+  F R G ++RA+    +M   G   +  L  I+IN  
Sbjct: 302 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 361

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A +  + M   GC  D ++Y T+L GLCRA+   +A +L  EM+ +   P+ 
Sbjct: 362 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 421

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG----------- 289
            TF T I   C+ G + +A  L + M++   + +IVTYN L++GFC  G           
Sbjct: 422 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 481

Query: 290 ---------------------EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                                 ++ A +L A+M+ +  +PN +++ +L++ +C  G + E
Sbjct: 482 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 541

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  +M+  G  P L++ NT++ G  +  ++ +A E L  +VS GV PD ++Y+++I 
Sbjct: 542 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 601

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              RE+ +++A  +   +++ G+ P  + YN IL   C++     +      M+  G  P
Sbjct: 602 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 661

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +  TY TLI G  +++ LKE      E+  RG +
Sbjct: 662 NELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 244/484 (50%), Gaps = 6/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  +   A   L   E+ G   D   YNTL+  YCR G L+ A +L+ SM    
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--- 171

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TY  +I GLC +GR   A  +LD+ML  G  P   TY  LL   C+     +A 
Sbjct: 172 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +G  P+IV+++ +I    R G++D A  +   + S G  PD V YT ++ G 
Sbjct: 232 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 291

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +  ++  EM+EK C+ + VT++ ++   CR  M+  A  +  +M   G   + 
Sbjct: 292 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 351

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                +I+  CK G ++ A    + M      PD ++Y T++ G C+    E A +L  +
Sbjct: 352 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 411

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   PN +++   I   C  G + +A  L  +M   G +  +V+ N ++ G+C  G 
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 471

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E    M  +   P++I+Y TL+ G    E +D A  L+++M  +   P+V+T+NV
Sbjct: 472 VDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 528

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++ FC++G M ++  ++ +M+E G  P+  TY TL++G     N +EA      ++  G
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588

Query: 481 FVPD 484
             PD
Sbjct: 589 VSPD 592



 Score =  240 bits (613), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 221/436 (50%), Gaps = 6/436 (1%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           A +L++  + +G  P V+    LI  LC++GR   A  VL    + G + D   YNTL+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
             CR   +  A  +   M    VAPD  +++ +I      G++  AL    +M   G  P
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
             V YT+++   C++    +A+++ DEM  KGC  ++VTYN I+NG+CR   + +A +  
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
           N +   G  PD  ++TT++ G C          LF  M +K+  P+ VT++ L+  FC+ 
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G +E+A ++   M     + N     I+IN  C  G V +AF+    M   G  P  +S 
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 389

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
            T++KG CR+     A E L +MV +   P+ +++NT I    ++  +++A  L+ +M  
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            G   +++TYN ++ GFC QGR+  +  + + M  K   P+  TYTTL+ G  +   L  
Sbjct: 450 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDA 506

Query: 469 AFRFHDEMLQRGFVPD 484
           A     EMLQ+   P+
Sbjct: 507 AAELLAEMLQKDCAPN 522



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 202/394 (51%), Gaps = 3/394 (0%)

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           RA  ++D     G +PD      L+   CR+   S+A  +     R G A D+ +++TL+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             + R GQLD A    R + S  + PD   YT II G C  G V EAL + D+ML +GC 
Sbjct: 152 AGYCRYGQLDAAR---RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
             VVTY  +L  +C++    +A ++ +EM  +G  P+  T+  +I+G C++G ++ A   
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            + ++    +PD V+Y T++ G C     E   +L+A+M+ +   PN +++ +L+  +C 
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V  A ++  +M G G       CN +I   C+ G    A +FL+ M S G  PD+IS
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y T++ G  R E  + A  L+ +M  +   P+ +T+N  +   C++G +  + +++ +M 
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           E G   +  TY  L+NG   Q  +  A      M
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 482



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 165/333 (49%), Gaps = 3/333 (0%)

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           RA        S G  PD  L T +I   CR G   +A ++       G  +DV  YNT++
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            G CR   L  A  L   M    V PD YT+T +I G C  G + +AL+L D M  +  +
Sbjct: 152 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P +VTY  L++  CK     +A ++  +M ++  +PN ++Y ++ING C  G V +A   
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
              +   G +P  VS  T++KG C +      +E  ++M+ +   P+ ++++ L+  F R
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              +++A  ++ +M   G   +    N+++   C+QGR+ D+   L  M   G +PD  +
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           YTT++ G       ++A     EM+++   P++
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 421



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 90/172 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C+   +D A   + +M + G  P+ +TYNTL++   ++   EEA +L++ +   G
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY+S+I  L ++ R + A ++   +  +G+ P    YN +L+  C++ N   A 
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 648

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           + F  M   G  P+ +++ TLI   +    L       RE+ S G++  N+L
Sbjct: 649 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLL 700


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 260/474 (54%), Gaps = 1/474 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D+ K+F  EM   GV P+ +TYNT+I+ + + G LE  F+L + M   G KP V TYN L
Sbjct: 212 DALKVFD-EMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVL 270

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++GLC+ GR D  + ++DEM    + PD  TY+ L     R         +F E  ++GV
Sbjct: 271 LSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGV 330

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
                + S L+    ++G++ +A   F  +   GLVP  V+Y  +INGYC+   +  A  
Sbjct: 331 MLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 390

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + ++M  +    D +TYN ++NGLC+ +M+T+A+DL  EM + GV P   TF TLI  + 
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
             G + K   +   M QK IK D++++ +++  FCK G++ +A  +  DMI + ++PN  
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y  +I+ Y   G   +A  L  +M   G+  ++V+ N ++KG CRS    +A+E +  +
Sbjct: 511 VYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            ++G+ PD +SYNT+I+    + + DKA  L+ +M   G+ P + T + +++     GR+
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRV 630

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           HD E +  +M+ K + P  S Y  +++ +V   N  +      EM ++G   DD
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 217/414 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  ++D  +  + EM    + PD  TY+ L +   R G  +    L      KG
Sbjct: 270 LLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKG 329

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +  G +T + L+NGLCK G+  +AK+V + ++  GL P T  YNTL+   C+  ++  A 
Sbjct: 330 VMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAF 389

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF +M  R + PD ++++ LI    +   + +A     EM+ +G+ P    +  +I+ Y
Sbjct: 390 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 449

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + +   +  +M +KG   DV+++ +++   C+   + EA  + ++M+ + V P+ 
Sbjct: 450 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 509

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + ++I  + + G+  +AL L + M    +   IVTYN L+ G C+  ++++A +L   
Sbjct: 510 QVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 569

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + ++ + P+ +SY  +I+  C+ G   +A  L  EM   GI+PTL +C+T++     +G 
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGR 629

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
               +    +M+ + V+P S  Y  +++ +VR EN  K  +L  +M  +G+  D
Sbjct: 630 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P+L SCN +++     G  +        +V+ G  PD+ ++N ++   V   ++D A A+
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 403 VSKM-ENQGL-VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
           + +M  ++G   PD  +YNV++ G  R G+  D+  +   M++ G+ P+R TY T+I+GH
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPD 484
           V   +L+  FR  D+ML  G  P+
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPN 263



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 87/170 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  +    + A + + +M+  GV    VTYN L+   CR   ++EA +L+ ++  +G
Sbjct: 515 IIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 574

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V +YN++I+  C KG  D+A E+L EM + G+ P   T +TL+        + + E
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDME 634

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
            ++ +M  + V P    +  ++  + R     +     +EM   G+  D+
Sbjct: 635 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 152/486 (31%), Positives = 268/486 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K +K D       +M+  G+  +  TY+ LIN +CR   L  A  ++  M   G
Sbjct: 87  LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M   G  P+T T+NTL+         SEA 
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G  PD+V++  ++    + G  D A     +M+   L P  ++Y  II+G 
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM  KG   +VVTY+++++ LC     ++A  L ++M+ER + PD 
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF+ LI    K+G + +A  L+D M ++SI P IVTY++LI+GFC    +++A +++  
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+   P+ ++Y  LI G+C    V E   ++ EM  +G+    V+ N +I+G  ++GD
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E   +MVS+GV P+ ++YNTL++G  +   ++KA  +   ++   + P + TYN+
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ PD   Y T+I+G   + + +EA     EM + G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566

Query: 481 FVPDDA 486
            +P+  
Sbjct: 567 TLPNSG 572



 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 152/436 (34%), Positives = 240/436 (55%), Gaps = 1/436 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L   +K   A   +  M  KG  PD VTY  ++N  C+ G  + AF L+N M    
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+PGV  YN++I+GLCK    D A  +  EM   G+ P+  TY++L+   C     S+A 
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + PD+ +FS LI  F + G+L  A   + EM    + P  V Y+ +ING+
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA +M + M+ K C  DVVTYNT++ G C+ K + E  ++F EM +RG+  + 
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G  + G+ + A  +F  M    + P+I+TYNTL+DG CK G++EKA  ++  
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+ P   +Y I+I G C  G V + + L+  +  KG+KP +V+ NT+I G+CR G 
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +AD    +M  +G  P+S  YNTLI   +R+ + + +  L+ +M + G   D  T  +
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611

Query: 421 ILTGFCRQGRMHDSEL 436
           + T     GR+  S L
Sbjct: 612 V-TNMLHDGRLDKSFL 626



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 260/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++  A   L +M + G  P+ VT ++L+N YC    + EA  L++ M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+N+LI+GL    +   A  ++D M+  G  PD  TY  ++   C++ +   A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +  + P ++ ++T+I    +   +D AL  F+EM++ G+ P+ V Y+ +I+  
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++  +M+E+    DV T++ +++   +   L EA+ L++EM++R + P  
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LI+G C    +++A  +F+ M  K   PD+VTYNTLI GFCK   +E+  +++ +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  N ++Y ILI G    G    A  ++ EMV  G+ P +++ NT++ G C++G 
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA      +    ++P   +YN +I G  +   ++  + L   +  +G+ PDV+ YN 
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++GFCR+G   +++ +   M E G  P+   Y TLI   +   + + +     EM   G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601

Query: 481 FVPD 484
           F  D
Sbjct: 602 FAGD 605


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 271/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   ++ A+  L  M  KGV P+T TYN +I  YC  G LEEA +L+  MSG G
Sbjct: 244 LIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 303

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V TY  LI   CK GRC  A+ V D M++ G  P++  Y+ LL     K  + +  
Sbjct: 304 LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 363

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M R G+  +  +F+ LI  ++++G +D+A+  F EM+  GL PD V Y+ +I+  
Sbjct: 364 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 423

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A+   ++M+ +G   +++++ ++++GLC      + ++L  EM+ RG+ PD 
Sbjct: 424 CKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 483

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
               T++   CK+G + +A + FD++    +KP++V+YNTLIDG+C VG+M+++ K +  
Sbjct: 484 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDR 543

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+  +Y  L+NGY   G V +A  L+ EM  K +K   ++ N I+ G  ++G 
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGR 603

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E   KMV  G      +YNT++ G      +D+A  +   + ++    DV T+N+
Sbjct: 604 IVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNI 663

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR+ +++ +   M+ +G  P   TY+ +I   + +  L+E+      M + G
Sbjct: 664 VINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNG 723

Query: 481 FVPD 484
              D
Sbjct: 724 CAAD 727



 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 259/484 (53%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC   + D A  M    M + G  PD  +YN LI   C E   +EA +L+  M+  
Sbjct: 135 LIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTAD 194

Query: 60  G---LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
           G     P V +Y+++I+G  K+G  D+A  + DEM+  G  PD  TY++L+   C+ + M
Sbjct: 195 GGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAM 254

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
           ++AE I   M  +GV P+  +++ +I  +   GQL+ A+   ++M  +GL PD V Y ++
Sbjct: 255 NKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILL 314

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I  YC+ G   EA  + D M+ KG   +   Y+ +L+G      L +  DL + M+  G+
Sbjct: 315 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 374

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
             +   F  LI  + K G ++KA+  F  M Q  ++PD+V+Y+T+I   CK+G +E A  
Sbjct: 375 PFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVY 434

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
            +  M+S  +SPN IS+  LI+G CS+G   +   L +EM+ +GI P  +  NTI+   C
Sbjct: 435 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 494

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G   +A +F   ++  GV P+ +SYNTLI+G+     MD++     +M + GL PD  
Sbjct: 495 KEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSW 554

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN +L G+ + GR+ D+  +   M  K +     T   +++G      +  A   + +M
Sbjct: 555 TYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKM 614

Query: 477 LQRG 480
           + RG
Sbjct: 615 VDRG 618



 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 266/487 (54%), Gaps = 3/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY---PDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++  LC + K   A   L  M   G Y   P+ V+Y+T+I+ + +EG +++A+ L + M 
Sbjct: 171 LIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMI 230

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G+G  P V TY+SLI+GLCK    ++A+ +L  M   G+ P+T TYN ++   C    + 
Sbjct: 231 GQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLE 290

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA  +  +MS  G+ PD+V++  LI  + + G+   A   F  M   G  P++ +Y I++
Sbjct: 291 EAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILL 350

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +GY   G +++   + D M+  G   +   +N ++    +   + +A   F EM + G+ 
Sbjct: 351 HGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLR 410

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  +++T+IH  CK G +  A+  F+ M  + + P+I+++ +LI G C +GE +K  +L
Sbjct: 411 PDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEEL 470

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +MI+R I P+ I    +++  C  G V EA   +  ++  G+KP +VS NT+I GYC 
Sbjct: 471 AFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCF 530

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   ++ +   +MVS G+ PDS +YN L+NG+ +   ++ A AL  +M  + +    IT
Sbjct: 531 VGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAIT 590

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            N+IL G  + GR+  +  +  +M+++G      TY T++ G    + + EA R  +++ 
Sbjct: 591 SNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLR 650

Query: 478 QRGFVPD 484
            + F  D
Sbjct: 651 SKEFELD 657



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/453 (32%), Positives = 232/453 (51%), Gaps = 4/453 (0%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE-VLDEMLQM 94
           LI  +C  G L+ AF         G +    T N LI GLC   R D A + V   M ++
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG---VAPDIVSFSTLIGIFSRNGQL 151
           G +PD  +YN L+   C ++   EA E+   M+  G    +P++VS+ST+I  F + G++
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D+A   F EM   G  PD V Y+ +I+G C+   + +A  +   M +KG + +  TYN +
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           + G C    L EA  L  +M   G+ PD  T+  LI  +CK G   +A ++FD M +K  
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ 339

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           KP+   Y+ L+ G+   G +     L   MI   I   + ++ ILI  Y   G V +A  
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
            + EM   G++P +VS +T+I   C+ G    A    ++MVSEG+ P+ IS+ +LI+G  
Sbjct: 400 AFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 459

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
                 K   L  +M N+G+ PD I  N I+   C++GR+ +++     +I  G+ P+  
Sbjct: 460 SIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVV 519

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +Y TLI+G+     + E+ +  D M+  G  PD
Sbjct: 520 SYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPD 552



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 208/445 (46%), Gaps = 40/445 (8%)

Query: 49  AFQLMNSMSGKG---LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           A  L N+M+  G   +    +    LI   C  GR D A       L+MG      T N 
Sbjct: 75  AVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQ 134

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   C  +   +A +                                  M FR M   G
Sbjct: 135 LIKGLCDGKRTDDAMD----------------------------------MVFRRMPELG 160

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG---CVMDVVTYNTILNGLCRAKMLT 222
             PD   Y  +I G C      EAL++   M   G   C  +VV+Y+TI++G  +   + 
Sbjct: 161 YTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVD 220

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           +A  LF+EM+ +G  PD  T+++LI G CK   MNKA  +   M  K + P+  TYN +I
Sbjct: 221 KAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMI 280

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            G+C +G++E+A +L   M    + P+ ++Y +LI  YC +G   EA  ++  MV KG K
Sbjct: 281 RGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQK 340

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P     + ++ GY   G      + L  M+ +G+  +  ++N LI  + +   +DKA   
Sbjct: 341 PNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA 400

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
            ++M   GL PDV++Y+ ++   C+ GR+ D+     +M+ +GL+P+  ++T+LI+G  S
Sbjct: 401 FTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 460

Query: 463 QNNLKEAFRFHDEMLQRGFVPDDAF 487
               K+      EM+ RG  PD  F
Sbjct: 461 IGEWKKVEELAFEMINRGIHPDAIF 485


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 156/478 (32%), Positives = 257/478 (53%), Gaps = 3/478 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L ++ +++    FL  M  +G  PD +   +LI  +CR G  ++A  +M  +   G  P 
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V TYN LI+G CK G  D A +VLD   +M ++PD  TYNT+L   C    + +A E+  
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
              ++   PD+++++ LI    +   + +A+    EM++ G  PD V Y ++ING C+ G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA+K  + M   GC  +V+T+N IL  +C      +A+ L ++ML +G  P   TF 
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI+  C+ G + +A+++ + M      P+ ++YN L+ GFCK  +M++A +    M+SR
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y  L+   C  G V  A  +  ++  KG  P L++ NT+I G  + G   +A
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            + L +M  +G+ PD I+Y++L++G  RE  +D+A      +E  G+ P+ ITYN I+ G
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            C+  +   +   L  MI K   P  +TYT LI G   +   KEA    +E+  RG V
Sbjct: 541 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598



 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 143/446 (32%), Positives = 249/446 (55%), Gaps = 3/446 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  K   A   +  +EQ G  PD +TYN LI+ YC+ G ++ A Q+++ M+   
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN--- 211

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+++  LC  G+  +A EVLD  LQ    PD  TY  L+  +C++  + +A 
Sbjct: 212 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  +G  PD+V+++ LI    + G+LD A+ +   M S G  P+ + + II+   
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  ++A K+  +ML KGC   VVT+N ++N LCR  +L  A D+  +M   G  P+ 
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  L+HG CK+  M++A+   DIM  +   PDIVTYNTL+   CK G+++ A ++   
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+  SP  I+Y  +I+G   +G    A +L  EM  KG+KP +++ ++++ G  R G 
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 511

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +F   +   G+ P++I+YN+++ G  +    D+A   ++ M ++   P   TY +
Sbjct: 512 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 571

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           ++ G   +G   ++  +L  +  +GL
Sbjct: 572 LIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 134/359 (37%), Positives = 210/359 (58%), Gaps = 3/359 (0%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  RG  PDI+  ++LI  F R G+  +A      ++ +G VPD + Y ++I+GYC++G 
Sbjct: 140 MVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGE 199

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           +  AL++ D M       DVVTYNTIL  LC +  L +A ++ +  L++  +PD  T+T 
Sbjct: 200 IDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTI 256

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI   CK+  + +A+ L D M  K  KPD+VTYN LI+G CK G +++A K   +M S  
Sbjct: 257 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 316

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             PN I++ I++   CS G   +A +L  +M+ KG  P++V+ N +I   CR G   +A 
Sbjct: 317 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 376

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           + L KM   G  P+S+SYN L++GF +E+ MD+A   +  M ++G  PD++TYN +LT  
Sbjct: 377 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 436

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+ G++  +  IL ++  KG +P   TY T+I+G       + A +  DEM ++G  PD
Sbjct: 437 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 495


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 272/485 (56%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    + SA + + E+ + G+ P+ VTY+ LI+  C+ G +E+AF+  + M  KG
Sbjct: 269 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 328

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V++ NS++ G  K      A  + ++ L+ GL+ +  T+NTLL   C++  M+EA 
Sbjct: 329 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEAC 387

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ E+  +G++P++VS++ +I    R   ++ A   ++EM   G  P+ V +TI+++GY
Sbjct: 388 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 447

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +  A  +   M +   +    T   I+ GLC+A    E  DLFN+ + +G  P  
Sbjct: 448 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 507

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T+I G  K+GN+N A N++  M +  I P  VTY +LIDGFCK   ++ A KL  D
Sbjct: 508 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 567

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + +  +  +YG LI+G+C    +  A  L  E+ G G+ P     N++I G+    +
Sbjct: 568 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 627

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +   KMV+EG+  D  +Y +LI+G ++   +  A  + ++M ++G++PD   + V
Sbjct: 628 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 687

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C +G+  ++  IL  M  K + P    Y TLI GH  + NL+EAFR HDEML RG
Sbjct: 688 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 747

Query: 481 FVPDD 485
            VPD+
Sbjct: 748 LVPDN 752



 Score =  288 bits (737), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 148/459 (32%), Positives = 263/459 (57%), Gaps = 1/459 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+  I+ A  F  EM+ KG+     + N+++  Y +    + AF + N     G
Sbjct: 304 LIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG 363

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   VFT+N+L++ LCK+G+ + A  + DE++  G+SP+  +YN +++  CRK+N++ A 
Sbjct: 364 L-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAAC 422

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM   G  P+ V+F+ L+  + + G ++ A   F  MK A ++P +    III G 
Sbjct: 423 KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGL 482

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   E   + ++ + +G V   + YNTI++G  +   +  A +++ EM E G+ P  
Sbjct: 483 CKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPST 542

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI G CK  N++ AL L + M +K +K DI  Y TLIDGFCK  +M+ A++L  +
Sbjct: 543 VTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNE 602

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    +SPN   Y  +I G+ +M +V EA  L+ +MV +GI   L +  ++I G  +SG 
Sbjct: 603 LRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGR 662

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  ++M+S+G+ PD  ++  LING   +   + A  ++  M  + ++P V+ YN 
Sbjct: 663 LLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNT 722

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++ G  ++G + ++  +   M+++GL PD  TY  L+NG
Sbjct: 723 LIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 252/479 (52%), Gaps = 2/479 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           ++  I  A+    + + +GV  D   Y+  ++  C +     A  L+  M   G  P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T+ S+I    K+G    A  + D+M+  G S + A   +L+   C + N+  A  +  E+
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           S  G+ P+ V++S LI    +NG +++A  ++ EMK+ G+         I+ GY +    
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             A  M ++ LE G + +V T+NT+L+ LC+   + EA +L++E++ +G+ P+  ++  +
Sbjct: 350 QNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I GHC+  N+N A  ++  M      P+ VT+  L+DG+ K G++E A  ++  M    I
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P   + GI+I G C  G   E   L+ + V +G  PT +  NTII G+ + G+ + A  
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              +M   G+ P +++Y +LI+GF +  N+D A  L++ M+ +GL  D+  Y  ++ GFC
Sbjct: 529 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++  M  +  +L  +   GL+P+R  Y ++I G  + NN++EA   + +M+  G +P D
Sbjct: 589 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG-IPCD 646



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 151/261 (57%), Gaps = 1/261 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K+  I+ A     EM + G+ P TVTY +LI+ +C+   ++ A +L+N M  KG
Sbjct: 513 IIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKG 572

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK  +  Y +LI+G CK+     A E+L+E+   GLSP+   YN+++       N+ EA 
Sbjct: 573 LKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAI 632

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M   G+  D+ ++++LI    ++G+L  A     EM S G++PD+  +T++ING 
Sbjct: 633 DLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGL 692

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G    A K+ ++M  K  +  V+ YNT++ G  +   L EA  L +EML+RG+ PD 
Sbjct: 693 CNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDN 752

Query: 241 YTFTTLIHGHCK-DGNMNKAL 260
            T+  L++G  K DGN ++ L
Sbjct: 753 ITYDILVNGKFKGDGNFSRDL 773


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 147/463 (31%), Positives = 262/463 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV P+ +TYN++++ YC     +EA   +  M   G
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYNSL++ LCK GR   A+++ D M + GL PD ATY TLL     K  + E  
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMH 356

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ PD   F+ LI  +++  ++D A++ F +M+  GL P+ V Y  +I   
Sbjct: 357 ALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL 416

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A+   ++M+++G   +++ Y ++++ LC      +A++L  EML+RG+  + 
Sbjct: 417 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNT 476

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++IH HCK+G + ++  LFD+M +  +KP+++TY+TLIDG+C  G+M++A KL + 
Sbjct: 477 IFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSS 536

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  + P+ ++Y  LINGYC +  + +A  L+ EMV  G+ P +++ N I++G   +  
Sbjct: 537 MFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 596

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    +   G   +  +YN +++G  +    D+A  +   +    L  +  T+N+
Sbjct: 597 TAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 656

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           ++    + GR  +++ +   +   GL PD  TY+ +    + Q
Sbjct: 657 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 699



 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 154/475 (32%), Positives = 257/475 (54%), Gaps = 3/475 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK---GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++  LC +++   A   L  M      G  PD V+Y T+IN + +EG  ++A+   + M 
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            + + P V TY+S+I  LCK    D+A EVL  M++ G+ P+  TYN++L   C  E   
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA     +M   GV PD+V++++L+    +NG+   A   F  M   GL PD   Y  ++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            GY   G ++E   + D M+  G   D   +N ++    + + + EA  +F++M + G+ 
Sbjct: 344 QGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  +I   CK G+++ A+  F+ M  + + P+I+ Y +LI   C   + +KA +L
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M+ R I  N I +  +I+ +C  G V E+ +L+  MV  G+KP +++ +T+I GYC 
Sbjct: 464 ILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +G   +A + LS M S G+ PD ++YNTLING+ R   MD A AL  +M + G+ P++IT
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           YN+IL G     R   ++ +   + + G   + STY  +++G    N   EA R 
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 241/463 (52%), Gaps = 4/463 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P   TY  LI   CR G L+  F  + ++  KG +    T+  L+ GLC   R   A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR---GVAPDIVSFSTL 141
           + VL  M ++   PD  +   LL   C +    EA E+   M+     G APD+VS++T+
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F + G  D+A   + EM    + PD V Y+ II   C+   + +A+++   M++ G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + + +TYN+IL+G C ++   EA     +M   GV PD  T+ +L+   CK+G   +A  
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +FD MT++ ++PDI TY TL+ G+   G + + + L   M+   I P++  + ILI  Y 
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
               V EA  ++ +M   G+ P +V+   +I   C+SG    A  +  +M+ EG+ P+ I
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            Y +LI+     +  DKA  L+ +M ++G+  + I +N I+   C++GR+ +SE +   M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  G+ P+  TY+TLI+G+     + EA +    M   G  PD
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 257/488 (52%), Gaps = 4/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++   C+  ++D     L  + +KG   + +T+  L+   C +    +A  + +  M+  
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ---MGLSPDTATYNTLLVESCRKENM 116
              P VF+   L+ GLC + R   A E+L  M      G +PD  +Y T++    ++ + 
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A   + EM  R ++PD+V++S++I    +   +D+A+     M   G++P+ + Y  I
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++GYC +    EA+    +M   G   DVVTYN++++ LC+    TEA  +F+ M +RG+
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD  T+ TL+ G+   G + +   L D+M +  I PD   +N LI  + K  ++++A  
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +++ M    ++PN ++YG +I   C  G V +A   + +M+ +G+ P ++   ++I   C
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
                 KA+E + +M+  G+  ++I +N++I+   +E  + ++  L   M   G+ P+VI
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY+ ++ G+C  G+M ++  +L  M   G+ PD  TY TLING+   + + +A     EM
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572

Query: 477 LQRGFVPD 484
           +  G  P+
Sbjct: 573 VSSGVSPN 580



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 200/374 (53%), Gaps = 1/374 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K  K+D A +   +M Q G+ P+ VTY  +I   C+ G +++A      M  +G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P +  Y SLI+ LC   + D+A+E++ EML  G+  +T  +N+++   C++  + E+E
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV P+++++STLI  +   G++D A      M S G+ PD V Y  +INGY
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   + +AL +  EM+  G   +++TYN IL GL   +    A +L+  + + G   + 
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   ++AL +F  +    ++ +  T+N +I    KVG  ++A  L+A 
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 676

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +  + P+  +Y ++       G + E   L+  M   G        N+I++   + GD
Sbjct: 677 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 736

Query: 361 ASKADEFLSKMVSE 374
            ++A  +LS M+ E
Sbjct: 737 ITRAGTYLS-MIDE 749



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 146/310 (47%), Gaps = 16/310 (5%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG---VFPDFYTFT 244
           +A  + +E+L +G    +   N  L  + R      A   +N M   G   V P  +T+ 
Sbjct: 33  DARHVFEELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI   C+ G ++        + +K  + + +T+  L+ G C     +K      D++ R
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA----DKRTSDAMDIVLR 147

Query: 305 KIS-----PNYISYGILINGYCSMGHVTEAFRLWYEMV---GKGIKPTLVSCNTIIKGYC 356
           +++     P+  S  IL+ G C      EA  L + M    G G  P +VS  T+I G+ 
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + GD+ KA     +M+   + PD ++Y+++I    + + MDKA  +++ M   G++P+ +
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN IL G+C   +  ++   L +M   G+ PD  TY +L++         EA +  D M
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327

Query: 477 LQRGFVPDDA 486
            +RG  PD A
Sbjct: 328 TKRGLEPDIA 337


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 252/487 (51%), Gaps = 2/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC   +I  A     +M  +G  P  VTY+ L++A C+E    +A  L++ M  KG
Sbjct: 257 LIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKG 316

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TYN LIN +C +G  D A  +L  +   G  PD  TY  +L   C  E   E E
Sbjct: 317 CEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVE 376

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM+    APD V+F+T++    + G +DRA+     M   G V D V Y+ I++G 
Sbjct: 377 ELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGL 436

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A+++   +   GC  D + Y T+L GLC  +    A++L  EML     PD 
Sbjct: 437 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDE 496

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF T++   C+ G +++A+ + + M++    PDIVTYN +IDG C    ++ A +L +D
Sbjct: 497 VTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSD 556

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S    P+ +++  L+ G C +    +A +L   M+     P  ++ NT+I   C+ G 
Sbjct: 557 LQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGL 616

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A E L  M   G  P+S +Y+ +++  ++      A  L+S M N    PD+ITYN 
Sbjct: 617 LTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNT 674

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++   + G+M ++  +L  M+  GL PD +TY +L  G   ++    A R    +   G
Sbjct: 675 VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG 734

Query: 481 FVPDDAF 487
             PD  F
Sbjct: 735 LSPDTTF 741



 Score =  280 bits (717), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 247/515 (47%), Gaps = 33/515 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A CK+     A   L EM  KG  PD VTYN LINA C EG ++EA  +++++   G
Sbjct: 292 LLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHG 351

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP   TY  ++  LC   R    +E+L EM     +PD  T+NT++   C++  +  A 
Sbjct: 352 CKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAI 411

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   MS  G   DIV++S+++      G++D A+     +KS G  PD + YT ++ G 
Sbjct: 412 EVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 471

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C       A ++  EML   C  D VT+NT++  LC+  ++  A  +  +M E G  PD 
Sbjct: 472 CSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDI 531

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I G C +  ++ A+ L   +     KPDIVT+NTL+ G C V   E A +L A+
Sbjct: 532 VTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMAN 591

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI------------------- 341
           M+     P+ +++  +I   C  G +T+A      M   G                    
Sbjct: 592 MMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGK 651

Query: 342 --------------KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
                          P L++ NT+I    ++G   +A + L  MVS G+ PD+ +Y +L 
Sbjct: 652 AQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLA 711

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  RE+  D+A  ++ ++++ GL PD   YN +L GFCR  R   +      M+  G  
Sbjct: 712 YGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCM 771

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           PD STY  L+        L EA R    +   G +
Sbjct: 772 PDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 238/476 (50%), Gaps = 6/476 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC D ++  A+     +   G     VTYNT++N YCR G +E+A +L+N M    
Sbjct: 193 LIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP--- 246

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FT+N LI  LC +GR   A  V D+ML  G SP   TY+ LL  +C++    +A 
Sbjct: 247 FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM 306

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G  PDIV+++ LI      G +D AL     + S G  PD V YT ++   
Sbjct: 307 ALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSL 366

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +    E  ++  EM    C  D VT+NTI+  LC+  ++  A ++ + M E G   D 
Sbjct: 367 CGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADI 426

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++++ G C  G ++ A+ L   +     KPD + Y T++ G C   + E+A +L A+
Sbjct: 427 VTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAE 486

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     P+ +++  ++   C  G V  A R+  +M   G  P +V+ N II G C    
Sbjct: 487 MLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESC 546

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E LS + S G  PD +++NTL+ G    +  + A  L++ M      PD +T+N 
Sbjct: 547 IDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNT 606

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           ++T  C++G +  +   L  M E G  P+ STY+ +++  +     + A      M
Sbjct: 607 VITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662



 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 249/487 (51%), Gaps = 8/487 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVY--PDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           + +L +  +ID A +    M   G    P  V  N LI   C +G + +A ++  ++   
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G    V TYN+++NG C+ GR + A+ +++    M   PDT T+N L+   C +  + +A
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLIN---GMPFPPDTFTFNPLIRALCVRGRIPDA 270

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F +M  RG +P +V++S L+    +     +A+    EM++ G  PD V Y ++IN 
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C  G V EAL +   +   GC  D VTY  +L  LC ++   E ++L  EM      PD
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF T++   C+ G +++A+ + D M++     DIVTY++++DG C VG ++ A +L +
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLS 450

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + S    P+ I+Y  ++ G CS      A  L  EM+     P  V+ NT++   C+ G
Sbjct: 451 RLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKG 510

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   + +M   G  PD ++YN +I+G   E  +D A  L+S +++ G  PD++T+N
Sbjct: 511 LVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFN 570

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L G C   R  D+E ++  M+     PD  T+ T+I     +  L +A      M + 
Sbjct: 571 TLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAEN 630

Query: 480 GFVPDDA 486
           G VP+ +
Sbjct: 631 GCVPNSS 637


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 153/471 (32%), Positives = 263/471 (55%), Gaps = 1/471 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C  +++D     L ++ + G  PDT T+ TLI   C EG + EA  L + M G+G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TY +LI+GLCK G    A  +L  M+Q    P+  TYNT++    +   ++EA 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF EM  +G++P++ +++++I    +  +         EM  + ++P+ V++T +++  
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  A  + D M+++G   DVVTY  +++G C    + EAD +F+ M+ +G  P+ 
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++TLI+G+CK   ++KA+ LF+ M Q+ + P+IVTYNTLI G C VG +  A  L+ +
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    P+ ++Y IL++  C   H+ +A  +   + G  + P + S N +I G CR G+
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGE 474

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ PD  +Y  +ING   +  + +A  L  +M   G  PD  TYN+
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNL 534

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           I  GF R      +  +L  M+ +G + D ST  TLI   +S + L ++ +
Sbjct: 535 ITRGFLRNNETLSAIQLLQEMLGRGFSADAST-ITLIVEMLSDDGLDQSVK 584



 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 257/465 (55%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+  D  T   +IN++C    ++  F ++  +   G +P   T+ +LI GLC +G
Sbjct: 99  QMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEG 158

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+M+  G  P+  TY TL+   C+  N   A  +   M ++   P++++++
Sbjct: 159 KIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYN 218

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++ Q++ AL  F EM + G+ P+   Y  II+G C+         + +EM++ 
Sbjct: 219 TIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDS 278

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + +VV + T+++ LC+  M+T A D+ + M++RGV PD  T+T L+ GHC    M++A
Sbjct: 279 KIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEA 338

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +FD M +K   P++++Y+TLI+G+CK+  ++KA  L+ +M  R++ PN ++Y  LI+G
Sbjct: 339 DKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHG 398

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + +A  L++EMV  G  P LV+   ++   C++    +A   L  +    + PD
Sbjct: 399 LCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPD 458

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             SYN +I+G  R   ++ A  L S + ++GL PDV TY +++ G C QG + ++  +  
Sbjct: 459 IQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFR 518

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   G +PD  TY  +  G +  N    A +   EML RGF  D
Sbjct: 519 EMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSAD 563



 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 156/475 (32%), Positives = 247/475 (52%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID A      M      P  V +  ++ +            L   M   G+   V+T   
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +IN  C   R D    VL ++ ++G  PDTAT+ TL+   C +  + EA  +F +M   G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P+ V++ TLI    + G    A+   R M      P+ + Y  II+   ++  V EAL
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM+ KG   +V TYN+I++GLC+         L NEM++  + P+   FTTL+   
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+G +  A ++ D+M Q+ ++PD+VTY  L+DG C   EM++A+K++  M+ +  +PN 
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ISY  LINGYC +  + +A  L+ EM  + + P +V+ NT+I G C  G    A     +
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV+ G  PD ++Y  L++   +  ++D+A A++  +E   L PD+ +YN+++ G CR G 
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGE 474

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +  +  +   +  KGL+PD  TYT +ING   Q  L EA +   EM   G  PDD
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDD 529



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 231/443 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC + KI  A     +M  +G  P+ VTY TLI+  C+ G    A +L+ SM  K 
Sbjct: 150 LIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKN 209

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN++I+ L K  + + A  +  EM+  G+SP+ +TYN+++   C+        
Sbjct: 210 CEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVA 269

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM    + P++V F+TL+    + G +  A      M   G+ PD V YT +++G+
Sbjct: 270 TLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGH 329

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA K+ D M+ KGC  +V++Y+T++NG C+ + + +A  LF EM +R + P+ 
Sbjct: 330 CLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNI 389

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIHG C  G +  A+ LF  M      PD+VTY  L+D  CK   +++A  +   
Sbjct: 390 VTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKA 449

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    ++P+  SY I+I+G C +G +  A  L+  +  KG+ P + +   +I G C  G 
Sbjct: 450 IEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGL 509

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +   +M ++G  PD  +YN +  GF+R      A  L+ +M  +G   D  T  +
Sbjct: 510 LAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITL 569

Query: 421 ILTGFCRQGRMHDSELILWRMIE 443
           I+      G     + IL   ++
Sbjct: 570 IVEMLSDDGLDQSVKQILHEFVQ 592


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 268/484 (55%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++A+ K +K D       +M+  G+  +  TY+ LIN +CR   L  A  ++  M   G
Sbjct: 701  LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 760

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             +P + T +SL+NG C   R   A  ++D+M   G  P+T T+NTL+         SEA 
Sbjct: 761  YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 820

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +   M  +G  PD+V++  ++    + G  D A     +M+   L P  ++Y  II+G 
Sbjct: 821  ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 880

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+   + +AL +  EM  KG   +VVTY+++++ LC     ++A  L ++M+ER + PD 
Sbjct: 881  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 940

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +TF+ LI    K+G + +A  L+D M ++SI P IVTY++LI+GFC    +++A +++  
Sbjct: 941  FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 1000

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M+S+   P+ ++Y  LI G+C    V E   ++ EM  +G+    V+ N +I+G  ++GD
Sbjct: 1001 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 1060

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
               A E   +MVS+GV P+ ++YNTL++G  +   ++KA  +   ++   + P + TYN+
Sbjct: 1061 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 1120

Query: 421  ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            ++ G C+ G++ D   +   +  KG+ PD   Y T+I+G   + + +EA     EM + G
Sbjct: 1121 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 1180

Query: 481  FVPD 484
             +P+
Sbjct: 1181 TLPN 1184



 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 152/436 (34%), Positives = 240/436 (55%), Gaps = 1/436 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ L   +K   A   +  M  KG  PD VTY  ++N  C+ G  + AF L+N M    
Sbjct: 806  LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 865

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            L+PGV  YN++I+GLCK    D A  +  EM   G+ P+  TY++L+   C     S+A 
Sbjct: 866  LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 925

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  +M  R + PD+ +FS LI  F + G+L  A   + EM    + P  V Y+ +ING+
Sbjct: 926  RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 985

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C +  + EA +M + M+ K C  DVVTYNT++ G C+ K + E  ++F EM +RG+  + 
Sbjct: 986  CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T+  LI G  + G+ + A  +F  M    + P+I+TYNTL+DG CK G++EKA  ++  
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 1105

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            +   K+ P   +Y I+I G C  G V + + L+  +  KG+KP +V+ NT+I G+CR G 
Sbjct: 1106 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 1165

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              +AD    +M  +G  P+S  YNTLI   +R+ + + +  L+ +M + G   D  T  +
Sbjct: 1166 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 1225

Query: 421  ILTGFCRQGRMHDSEL 436
            + T     GR+  S L
Sbjct: 1226 V-TNMLHDGRLDKSFL 1240



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 260/484 (53%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++N  C+  ++  A   L +M + G  P+ VT ++L+N YC    + EA  L++ M   G
Sbjct: 736  LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             +P   T+N+LI+GL    +   A  ++D M+  G  PD  TY  ++   C++ +   A 
Sbjct: 796  YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  +M +  + P ++ ++T+I    +   +D AL  F+EM++ G+ P+ V Y+ +I+  
Sbjct: 856  NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C  G   +A ++  +M+E+    DV T++ +++   +   L EA+ L++EM++R + P  
Sbjct: 916  CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T+++LI+G C    +++A  +F+ M  K   PD+VTYNTLI GFCK   +E+  +++ +
Sbjct: 976  VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 1035

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M  R +  N ++Y ILI G    G    A  ++ EMV  G+ P +++ NT++ G C++G 
Sbjct: 1036 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 1095

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              KA      +    ++P   +YN +I G  +   ++  + L   +  +G+ PDV+ YN 
Sbjct: 1096 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 1155

Query: 421  ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +++GFCR+G   +++ +   M E G  P+   Y TLI   +   + + +     EM   G
Sbjct: 1156 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 1215

Query: 481  FVPD 484
            F  D
Sbjct: 1216 FAGD 1219



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 158/536 (29%), Positives = 265/536 (49%), Gaps = 52/536 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   ++  A   L +M + G  PD VT  +L+N +CR   + +A  L++ M   G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP +  YN++I+ LCK  R + A +   E+ + G+ P+  TY  L+   C     S+A 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M ++ + P+++++S L+  F +NG++  A   F EM    + PD V Y+ +ING 
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA +M D M+ KGC+ DVV+YNT++NG C+AK + +   LF EM +RG+  + 
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G  + G+++KA   F  M    I PDI TYN L+ G C  GE+EKA  ++ D
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC---- 356
           M  R++  + ++Y  +I G C  G V EA+ L+  +  KG+KP +V+  T++ G C    
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 588

Query: 357 -----------------------RSGDASKADEFLSKMVSEGVDPDSI------------ 381
                                    GD + + E + KM+S G  P  +            
Sbjct: 589 LHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKAL 648

Query: 382 ----------SYN---TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
                     SY+    L    + E  +D A AL  +M      P +I ++ +L+   + 
Sbjct: 649 SLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM 708

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +      +  +M   G+  +  TY+ LIN    ++ L  A     +M++ G+ P+
Sbjct: 709 NKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPN 764



 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 257/477 (53%), Gaps = 8/477 (1%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +D K++ A     +M +   +P  V +N L++A  +    +    L   M   G++  ++
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T+N +IN  C   +   A  +L +ML++G  PD  T  +L+   CR+  +S+A  +  +M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G  PDIV+++ +I    +  +++ A  +F+E++  G+ P+ V YT ++NG C +   
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A ++  +M++K    +V+TY+ +L+   +   + EA +LF EM+   + PD  T+++L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I+G C    +++A  +FD+M  K    D+V+YNTLI+GFCK   +E   KL+ +M  R +
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
             N ++Y  LI G+   G V +A   + +M   GI P + + N ++ G C +G+  KA  
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 524

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M    +D D ++Y T+I G  +   +++A++L   +  +GL PD++TY  +++G C
Sbjct: 525 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 584

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +G +H+ E +  +M ++GL  +  T        +S  ++  +     +ML  G+ P
Sbjct: 585 TKGLLHEVEALYTKMKQEGLMKNDCT--------LSDGDITLSAELIKKMLSCGYAP 633



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 241/444 (54%)

Query: 42  REGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTA 101
           R+  L +A  L + M      P +  +N L++ + K  + D    +  +M  +G+  D  
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           T+N ++   C    +S A  I  +M + G  PD V+  +L+  F R  ++  A+    +M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
              G  PD V Y  II+  C+   V +A     E+  KG   +VVTY  ++NGLC +   
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
           ++A  L ++M+++ + P+  T++ L+    K+G + +A  LF+ M + SI PDIVTY++L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           I+G C    +++AN+++  M+S+    + +SY  LING+C    V +  +L+ EM  +G+
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
               V+ NT+I+G+ ++GD  KA EF S+M   G+ PD  +YN L+ G      ++KA  
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 524

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +   M+ + +  D++TY  ++ G C+ G++ ++  +   +  KGL PD  TYTT+++G  
Sbjct: 525 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 584

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDD 485
           ++  L E    + +M Q G + +D
Sbjct: 585 TKGLLHEVEALYTKMKQEGLMKND 608



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 235/414 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D       +ME  G+  D  T+N +IN +C    +  A  ++  M   G
Sbjct: 194 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 253

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T  SL+NG C++ R   A  ++D+M+++G  PD   YN ++   C+ + +++A 
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 313

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F E+ R+G+ P++V+++ L+     + +   A     +M    + P+ + Y+ +++ +
Sbjct: 314 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 373

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG VLEA ++ +EM+      D+VTY++++NGLC    + EA+ +F+ M+ +G   D 
Sbjct: 374 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 433

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI+G CK   +   + LF  M+Q+ +  + VTYNTLI GF + G+++KA + ++ 
Sbjct: 434 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    ISP+  +Y IL+ G C  G + +A  ++ +M  + +   +V+  T+I+G C++G 
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 553

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             +A      +  +G+ PD ++Y T+++G   +  + +  AL +KM+ +GL+ +
Sbjct: 554 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 607


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 272/485 (56%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    + SA + + E+ + G+ P+ VTY+ LI+  C+ G +E+AF+  + M  KG
Sbjct: 151 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 210

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V++ NS++ G  K      A  + ++ L+ GL+ +  T+NTLL   C++  M+EA 
Sbjct: 211 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEAC 269

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ E+  +G++P++VS++ +I    R   ++ A   ++EM   G  P+ V +TI+++GY
Sbjct: 270 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 329

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +  A  +   M +   +    T   I+ GLC+A    E  DLFN+ + +G  P  
Sbjct: 330 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 389

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T+I G  K+GN+N A N++  M +  I P  VTY +LIDGFCK   ++ A KL  D
Sbjct: 390 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 449

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + +  +  +YG LI+G+C    +  A  L  E+ G G+ P     N++I G+    +
Sbjct: 450 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 509

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +   KMV+EG+  D  +Y +LI+G ++   +  A  + ++M ++G++PD   + V
Sbjct: 510 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 569

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C +G+  ++  IL  M  K + P    Y TLI GH  + NL+EAFR HDEML RG
Sbjct: 570 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 629

Query: 481 FVPDD 485
            VPD+
Sbjct: 630 LVPDN 634



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 148/459 (32%), Positives = 263/459 (57%), Gaps = 1/459 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+  I+ A  F  EM+ KG+     + N+++  Y +    + AF + N     G
Sbjct: 186 LIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG 245

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   VFT+N+L++ LCK+G+ + A  + DE++  G+SP+  +YN +++  CRK+N++ A 
Sbjct: 246 L-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAAC 304

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM   G  P+ V+F+ L+  + + G ++ A   F  MK A ++P +    III G 
Sbjct: 305 KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGL 364

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   E   + ++ + +G V   + YNTI++G  +   +  A +++ EM E G+ P  
Sbjct: 365 CKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPST 424

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI G CK  N++ AL L + M +K +K DI  Y TLIDGFCK  +M+ A++L  +
Sbjct: 425 VTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNE 484

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    +SPN   Y  +I G+ +M +V EA  L+ +MV +GI   L +  ++I G  +SG 
Sbjct: 485 LRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGR 544

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  ++M+S+G+ PD  ++  LING   +   + A  ++  M  + ++P V+ YN 
Sbjct: 545 LLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNT 604

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++ G  ++G + ++  +   M+++GL PD  TY  L+NG
Sbjct: 605 LIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 259/484 (53%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A+ + +    A+    +M   GV  D  T + ++ A  +EG + EA Q       +G
Sbjct: 11  LLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARG 70

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++     Y+  ++ LC K     A  +L EM   G  P   T+ +++    ++ N++EA 
Sbjct: 71  VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 130

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G + ++   ++L+  +   G L  AL+   E+  +GLVP+ V Y+++I+G 
Sbjct: 131 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 190

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG + +A +   EM  KG    V + N+IL G  + +    A  +FN+ LE G+  + 
Sbjct: 191 CKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANV 249

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF TL+   CK+G MN+A NL+D +  K I P++V+YN +I G C+   +  A K++ +
Sbjct: 250 FTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKE 309

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+    +PN +++ IL++GY   G +  AF +++ M    I PT  +   IIKG C++G 
Sbjct: 310 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 369

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + +  +  +K VS+G  P  + YNT+I+GF++E N++ A  +  +M   G+ P  +TY  
Sbjct: 370 SFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTS 429

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+   +  +  +L  M  KGL  D   Y TLI+G   + ++K A    +E+   G
Sbjct: 430 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG 489

Query: 481 FVPD 484
             P+
Sbjct: 490 LSPN 493



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 228/423 (53%), Gaps = 1/423 (0%)

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +   N L+  + +K     A+E+ ++ML +G++ D  T + +L    ++ N+ EAE
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F +   RGV  D  ++S  + +         AL   REM++AG +P    +T +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V EAL+++D+M+  G  M++    +++ G C    L  A  L NE+ E G+ P+ 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ LI G CK+GN+ KA   +  M  K I+  + + N++++G+ K    + A  ++ D
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            +   ++ N  ++  L++  C  G + EA  LW E++ KGI P +VS N II G+CR  +
Sbjct: 241 ALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDN 299

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A +   +M+  G  P+++++  L++G+ ++ +++ AF++  +M++  ++P   T  +
Sbjct: 300 INAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGI 359

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+ G C+ GR  +   +  + + +G  P    Y T+I+G + + N+  A   + EM + G
Sbjct: 360 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 419

Query: 481 FVP 483
             P
Sbjct: 420 ITP 422



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 151/261 (57%), Gaps = 1/261 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K+  I+ A     EM + G+ P TVTY +LI+ +C+   ++ A +L+N M  KG
Sbjct: 395 IIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKG 454

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK  +  Y +LI+G CK+     A E+L+E+   GLSP+   YN+++       N+ EA 
Sbjct: 455 LKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAI 514

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M   G+  D+ ++++LI    ++G+L  A     EM S G++PD+  +T++ING 
Sbjct: 515 DLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGL 574

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G    A K+ ++M  K  +  V+ YNT++ G  +   L EA  L +EML+RG+ PD 
Sbjct: 575 CNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDN 634

Query: 241 YTFTTLIHGHCK-DGNMNKAL 260
            T+  L++G  K DGN ++ L
Sbjct: 635 ITYDILVNGKFKGDGNFSRDL 655



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/179 (20%), Positives = 86/179 (48%)

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           ++P+     IL+          EA  L  +M+  G+     + + +++   + G+  +A+
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +   +  + GV+ D  +Y+  ++    + N   A +L+ +M   G +P   T+  ++T  
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++G + ++  +   M+  G + + +  T+L+ G+  Q NL+ A    +E+ + G VP+
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPN 179


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 263/514 (51%), Gaps = 32/514 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A   L +M  +G  P  VTY  L+ A C+     +A ++++ M  KG
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 210

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +ING+C++GR D A+E L+ +   G  PDT +Y T+L   C  +   + E
Sbjct: 211 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 270

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F EM  +   P+ V+F  L+  F R G ++RA+    +M   G   +  L  I+IN  
Sbjct: 271 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A +  + M   GC  D ++Y T+L GLCRA+   +A +L  EM+ +   P+ 
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG----------- 289
            TF T I   C+ G + +A  L + M++   + +IVTYN L++GFC  G           
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450

Query: 290 ---------------------EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                                 ++ A +L A+M+ +  +PN +++ +L++ +C  G + E
Sbjct: 451 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  +M+  G  P L++ NT++ G     ++ +A E L  +VS GV PD ++Y+++I 
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              RE+ +++A  +   +++ G+ P  + YN IL   C++     +      M+  G  P
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 630

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +  TY TLI G  +++ LKE      E+  RG +
Sbjct: 631 NELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  274 bits (700), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 245/484 (50%), Gaps = 6/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  +   A   L   E+ G   D   YNTL+  YCR G L+ A +L+ SM    
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--- 140

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TY  +I GLC +GR   A  +LD+ML  G  P   TY  LL   C+     +A 
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +G  P+IV+++ +I    R G++D A  +   + S G  PD V YT ++ G 
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +  ++  EM+EK C+ + VT++ ++   CR  M+  A  +  +M   G   + 
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                +I+  CK G ++ A    + M      PD ++Y T++ G C+    E A +L  +
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   PN +++   I   C  G + +A  L  +M   G +  +V+ N ++ G+C  G 
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E    M  +   P++I+Y TL+ G    E +D A  L+++M  +   P+V+T+NV
Sbjct: 441 VDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++ FC++G M ++  ++ +M+E G  P+  TY TL++G  +  N +EA      ++  G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557

Query: 481 FVPD 484
             PD
Sbjct: 558 VSPD 561



 Score =  244 bits (622), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 223/439 (50%), Gaps = 6/439 (1%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L EA +L++  + +G  P V+    LI  LC++GR   A  VL    + G + D   YNT
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   CR   +  A  +   M    VAPD  +++ +I      G++  AL    +M   G
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P  V YT+++   C++    +A+++ DEM  KGC  ++VTYN I+NG+CR   + +A 
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +  N +   G  PD  ++TT++ G C          LF  M +K+  P+ VT++ L+  F
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C+ G +E+A ++   M     + N     I+IN  C  G V +AF+    M   G  P  
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           +S  T++KG CR+     A E L +MV +   P+ +++NT I    ++  +++A  L+ +
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M   G   +++TYN ++ GFC QGR+  +  + + M  K   P+  TYTTL+ G  +   
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           L  A     EMLQ+   P+
Sbjct: 473 LDAAAELLAEMLQKDCAPN 491



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 206/408 (50%), Gaps = 3/408 (0%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N+ +  L  +     A  ++D     G +PD      L+   CR+   S+A  +     R
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G A D+ +++TL+  + R GQLD A    R + S  + PD   YT II G C  G V E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAAR---RLIASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           AL + D+ML +GC   VVTY  +L  +C++    +A ++ +EM  +G  P+  T+  +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G C++G ++ A    + ++    +PD V+Y T++ G C     E   +L+A+M+ +   P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N +++ +L+  +C  G V  A ++  +M G G       CN +I   C+ G    A +FL
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           + M S G  PD+ISY T++ G  R E  + A  L+ +M  +   P+ +T+N  +   C++
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           G +  + +++ +M E G   +  TY  L+NG   Q  +  A      M
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 186/384 (48%), Gaps = 5/384 (1%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           SP+ A  N  L     +++++EA  +    + RG APD+   + LI    R G+   A  
Sbjct: 42  SPNPA--NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR 99

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
             R  + +G   D   Y  ++ GYCR G +  A ++   M       D  TY  I+ GLC
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLC 156

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
               + EA  L ++ML RG  P   T+T L+   CK     +A+ + D M  K   P+IV
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TYN +I+G C+ G ++ A +    + S    P+ +SY  ++ G C+     +   L+ EM
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           + K   P  V+ + +++ +CR G   +A + L +M   G   ++   N +IN   ++  +
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           D AF  ++ M + G  PD I+Y  +L G CR  R  D++ +L  M+ K   P+  T+ T 
Sbjct: 337 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 396

Query: 457 INGHVSQNNLKEAFRFHDEMLQRG 480
           I     +  +++A    ++M + G
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHG 420



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 163/323 (50%), Gaps = 3/323 (0%)

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
           S G  PD  L T +I   CR G   +A ++       G  +DV  YNT++ G CR   L 
Sbjct: 71  SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLD 130

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
            A  L   M    V PD YT+T +I G C  G + +AL+L D M  +  +P +VTY  L+
Sbjct: 131 AARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 187

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +  CK     +A ++  +M ++  +PN ++Y ++ING C  G V +A      +   G +
Sbjct: 188 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQ 247

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P  VS  T++KG C +      +E  ++M+ +   P+ ++++ L+  F R   +++A  +
Sbjct: 248 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           + +M   G   +    N+++   C+QGR+ D+   L  M   G +PD  +YTT++ G   
Sbjct: 308 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367

Query: 463 QNNLKEAFRFHDEMLQRGFVPDD 485
               ++A     EM+++   P++
Sbjct: 368 AERWEDAKELLKEMVRKNCPPNE 390



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 89/172 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C+   +D A   + +M + G  P+ +TYNTL++    +   EEA +L++ +   G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY+S+I  L ++ R + A ++   +  +G+ P    YN +L+  C++ N   A 
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           + F  M   G  P+ +++ TLI   +    L       RE+ S G++  N+L
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLL 669


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/503 (31%), Positives = 271/503 (53%), Gaps = 22/503 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCRE----------------G 44
           ++   C  HK+  +     ++ + G  PD VT+NTL++  C E                G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 45  FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
           FLE A  L + M   GL P V T+N+LINGLC +GR   A  ++++M+  GL  D  TY 
Sbjct: 207 FLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           T++   C+  +   A  +  +M    + PD+V +S +I    ++G    A   F EM   
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G+ P+   Y  +I+G+C  G   +A ++  +M+E+    DV+T+N +++   +   L EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
           + L +EML R +FPD  T+ ++I+G CK    + A ++FD+M      PD+VT+NT+ID 
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           +C+   +++  +L  ++  R +  N  +Y  LI+G+C + ++  A  L+ EM+  G+ P 
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
            ++CN ++ G+C +    +A E    +    +D D+++YN +I+G  +   +D+A+ L  
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            +   G+ PDV TYNV+++GFC +  + D+ ++  +M + G  PD STY TLI G +   
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621

Query: 465 NLKEAFRFHDEMLQRGFVPDDAF 487
            + ++     EM   GF   DAF
Sbjct: 622 EIDKSIELISEMRSNGF-SGDAF 643



 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 237/434 (54%), Gaps = 5/434 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + ++  A   + +M  KG++ D VTY T++N  C+ G  + A  L++ M    
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V  Y+++I+ LCK G    A+ +  EML+ G++P+  TYN ++   C     S+A+
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + PD+++F+ LI    + G+L  A     EM    + PD V Y  +I G+
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++    +A  M D M       DVVT+NTI++  CRAK + E   L  E+  RG+  + 
Sbjct: 412 CKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIHG C+  N+N A +LF  M    + PD +T N L+ GFC+  ++E+A +L+  
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   KI  + ++Y I+I+G C    V EA+ L+  +   G++P + + N +I G+C    
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A+    KM   G +PD+ +YNTLI G ++   +DK+  L+S+M + G   D  T  +
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647

Query: 421 ILTGFCRQGRMHDS 434
           +       GR+  S
Sbjct: 648 V-ADLITDGRLDKS 660



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 260/501 (51%), Gaps = 19/501 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++    + ++ D A     +ME + +  +  ++N LI  +C    L  +      ++  G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 61  LKPGVFTYNSLINGLCKKGRCDRA---------------KEVLDEMLQMGLSPDTATYNT 105
            +P V T+N+L++GLC + R   A                 + D+M+++GL+P   T+NT
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   C +  + EA  +  +M  +G+  D+V++ T++    + G    AL    +M+   
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           + PD V+Y+ II+  C++G   +A  +  EMLEKG   +V TYN +++G C     ++A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            L  +M+ER + PD  TF  LI    K+G + +A  L D M  + I PD VTYN++I GF
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK    + A  ++ D+++   SP+ +++  +I+ YC    V E  +L  E+  +G+    
Sbjct: 412 CKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            + NT+I G+C   + + A +   +M+S GV PD+I+ N L+ GF   E +++A  L   
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ++   +  D + YN+I+ G C+  ++ ++  +   +   G+ PD  TY  +I+G   ++ 
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 466 LKEAFRFHDEMLQRGFVPDDA 486
           + +A     +M   G  PD++
Sbjct: 588 ISDANVLFHKMKDNGHEPDNS 608



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 231/433 (53%), Gaps = 4/433 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M + G+ P  +T+NTLIN  C EG + EA  L+N M GKGL   V TY +++NG+CK G
Sbjct: 216 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
               A  +L +M +  + PD   Y+ ++   C+  + S+A+ +F EM  +G+AP++ +++
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            +I  F   G+   A    R+M    + PD + +  +I+   + G + EA K+ DEML +
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               D VTYN+++ G C+     +A  +F+ M      PD  TF T+I  +C+   +++ 
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEG 451

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + L   ++++ +  +  TYNTLI GFC+V  +  A  L+ +MIS  + P+ I+  IL+ G
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C    + EA  L+  +    I    V+ N II G C+     +A +    +   GV+PD
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN +I+GF  +  +  A  L  KM++ G  PD  TYN ++ G  + G +  S  ++ 
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631

Query: 440 RMIEKGLNPDRST 452
            M   G + D  T
Sbjct: 632 EMRSNGFSGDAFT 644



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 229/462 (49%), Gaps = 24/462 (5%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A  F   M +   +   V  N +I  + R    + A  L   M  + +   ++++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI   C   +   +     ++ ++G  PD  T+NTLL   C ++ +SEA  +F  M   G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
                                  A+  F +M   GL P  + +  +ING C  G VLEA 
Sbjct: 207 FL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            + ++M+ KG  +DVVTY TI+NG+C+      A +L ++M E  + PD   ++ +I   
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CKDG+ + A  LF  M +K I P++ TYN +IDGFC  G    A +L  DMI R+I+P+ 
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +++  LI+     G + EA +L  EM+ + I P  V+ N++I G+C+      A      
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M S    PD +++NT+I+ + R + +D+   L+ ++  +GLV +  TYN ++ GFC    
Sbjct: 427 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           ++ ++ +   MI  G+ PD  T   L+ G      L+EA   
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 167/303 (55%), Gaps = 8/303 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K+ K+  A+    EM  + ++PDTVTYN++I  +C+    ++A  + + M+   
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+N++I+  C+  R D   ++L E+ + GL  +T TYNTL+   C  +N++ A+
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM   GV PD ++ + L+  F  N +L+ AL  F  ++ + +  D V Y III+G 
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA  +   +   G   DV TYN +++G C    +++A+ LF++M + G  PD 
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G  K G ++K++ L   M       D  T   + D     G ++K+   ++D
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS---FSD 663

Query: 301 MIS 303
           M+S
Sbjct: 664 MLS 666


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 159/488 (32%), Positives = 270/488 (55%), Gaps = 16/488 (3%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           H+  + K++  ++   G  P+ VT+  LI   C+ G    A + + ++    + P V+ +
Sbjct: 42  HQFRTGKVYK-DLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIF 100

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N LI+GL K G  D+A ++ + M    ++PD  TYNT++   C+  N+ +A E+  EM R
Sbjct: 101 NFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIR 160

Query: 129 RG--VAPDIVSFSTLIGI-FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           RG   APDIV+++TLI     ++G ++ AL     MK AG  PD + Y  II+  C  G 
Sbjct: 161 RGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGR 220

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V+EA ++   M    C  D+VT+NT+L+G C+A ML  A ++  EM    + PD  T+T 
Sbjct: 221 VVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 277

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL-------- 297
           L++G C+ G +  A  L + + ++   PD++ Y +L+DG CK GE+E+A+KL        
Sbjct: 278 LVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSARE 337

Query: 298 -WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
             A+M+S  + P   +Y I++ G    G +++A  L  ++V +G  P +V+ NT+I G C
Sbjct: 338 ILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 397

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           ++    +A +   +M S G  P+ ++  +++ G  R   +D A++LV +M  +   P+V+
Sbjct: 398 KANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVV 457

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            Y  ++ G C+  RM D+ ++L  M  +G+  D   Y  LI   +    + EA   +DEM
Sbjct: 458 VYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM 517

Query: 477 LQRGFVPD 484
           + RGF+PD
Sbjct: 518 VARGFLPD 525



 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 159/462 (34%), Positives = 247/462 (53%), Gaps = 21/462 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L KD   D A      ME   V PD  TYNT+I+  C+ G LE+A +L+  M  +G
Sbjct: 103 LIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRG 162

Query: 61  LK--PGVFTYNSLIN-GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            K  P + TYN+LIN G+CK G  + A E+LD M   G +PD  TYN+++   C    + 
Sbjct: 163 GKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVV 222

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA EI   MS    +PD+V+F+TL+  F + G L RAL    EM    ++PD + YTI++
Sbjct: 223 EAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILV 279

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG CR G V  A  + +E++ +G + DV+ Y ++++GLC++  + EA  L  EM  R + 
Sbjct: 280 NGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREIL 339

Query: 238 ---------PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
                    P  +T+  ++ G  KDG+++KA++L   +  +   PD+VTYNTLIDG CK 
Sbjct: 340 AEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKA 399

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
             + +A  L  +M S    PN ++ G ++ G C +G V +A+ L  EM  K   P +V  
Sbjct: 400 NRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVY 459

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
            ++I G C+S     A   L  M  +GV  D  +Y  LI   +    + +A A+  +M  
Sbjct: 460 TSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVA 519

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
           +G +PD  T   +      +  M +S +  W  +E+  + DR
Sbjct: 520 RGFLPDGSTSKTL-----EEAAMSNS-VFEWTNLEENASSDR 555



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 251/476 (52%), Gaps = 15/476 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +   A  FL  +++  V PD   +N LI+   ++G  ++A +L  +M    
Sbjct: 68  LIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSR 127

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG--LSPDTATYNTLLVES-CRKENMS 117
           + P +FTYN++I+GLCK G  ++A+E+L+EM++ G   +PD  TYNTL+    C+  ++ 
Sbjct: 128 VNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVE 187

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA EI   M   G APD+++++++I      G++  A    + M  +   PD V +  ++
Sbjct: 188 EALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVTFNTLL 244

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G+C+ G +  AL++ +EM  +  + DV+TY  ++NGLCR   +  A  L  E++ +G  
Sbjct: 245 DGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI 304

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI---------KPDIVTYNTLIDGFCKV 288
           PD   +T+L+ G CK G + +A  L   M+ + I          P + TYN ++ G  K 
Sbjct: 305 PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKD 364

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G + KA  L +D+++R   P+ ++Y  LI+G C    V EA  L  EM   G  P  V+ 
Sbjct: 365 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTL 424

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
            +++ G CR G    A   + +M  +   P+ + Y +LI+G  + + MD A  ++  M  
Sbjct: 425 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRG 484

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           QG+  D   Y  ++      GR+ ++  +   M+ +G  PD ST  TL    +S +
Sbjct: 485 QGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNS 540



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 183/337 (54%), Gaps = 7/337 (2%)

Query: 147 RNGQLDRALMYFREM-KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           R+ + D A+ +F    +  G   D   Y  +++   ++G      K+  ++L  GC  ++
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT+  ++ G C+A   T A +    + E  V PD Y F  LIHG  KDGN ++A+ LF+ 
Sbjct: 63  VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR--KISPNYISYGILIN-GYCS 322
           M    + PDI TYNT+I G CK G +EKA +L  +MI R  K +P+ ++Y  LIN G C 
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICK 182

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V EA  +   M   G  P +++ N+II   C +G   +A E L  M      PD ++
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVT 239

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           +NTL++GF +   + +A  ++ +M  + ++PDVITY +++ G CR G++  +  +L  ++
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +G  PD   YT+L++G      ++EA +   EM  R
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAR 336


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 154/472 (32%), Positives = 258/472 (54%), Gaps = 1/472 (0%)

Query: 1   MVNALCKDHKIDSAK-MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC   ++D A  + L  M + G  PD V YNT+IN + REG +E+A+ L   M  +
Sbjct: 131 LLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQ 190

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P V TY ++I+GLCK    DRAK V  +M+  G+ PD  TYN L+          E 
Sbjct: 191 GIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEV 250

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  EMS  G+ PD ++++ L+    +NG+   A ++F  M   G+ PD  +Y I+++G
Sbjct: 251 VQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHG 310

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y   G + E     D M+  G   +   +N +     +  M+ EA  +FN+M ++G+ PD
Sbjct: 311 YATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPD 370

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             +F  LI   CK G ++ A+  F+ M  + + P+I  +++L+ G C VG+ EKA +L+ 
Sbjct: 371 VVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF 430

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +++ + I  + + +  L+   C+ G V EA RL   M+  G++P ++S NT++ G+C +G
Sbjct: 431 EVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTG 490

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A + L  MVS G+ P+  +Y  L+ G+ +   +D A++L  +M  +G+ P V TYN
Sbjct: 491 RIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYN 550

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            IL G  + GR  ++  +   MI      D  TY  ++NG    N + EAF+
Sbjct: 551 TILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFK 602



 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 262/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D AK    +M  +GV PD  TYN LI+ Y   G  +E  Q++  MS  G
Sbjct: 202 VIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHG 261

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P   TY  L++ LCK GRC  A+   D M + G+ PD A Y  LL     K  +SE  
Sbjct: 262 LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMH 321

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M   GV+P+   F+ +   +++   ++ A+  F +M+  GL PD V +  +I+  
Sbjct: 322 SFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDAL 381

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A+   ++M+ +G   ++  +++++ GLC      +A++LF E+L++G+  D 
Sbjct: 382 CKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDA 441

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F TL+   C +G + +A  L D+M +  ++P++++YNTL+ G C  G +++A KL   
Sbjct: 442 VFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDV 501

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + PN  +Y IL+ GYC    V +A+ L+ EM+ KG+ P + + NTI+ G  ++G 
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A+E    M++     D  +YN ++NG  +   +D+AF +  ++ ++    D +T+N+
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNI 621

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  D+  +   +   GL PD  TY  +    + + +L E       M + G
Sbjct: 622 MIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681

Query: 481 FVPD 484
             P+
Sbjct: 682 TAPN 685



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 243/459 (52%), Gaps = 1/459 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P+  TY+ LI  +CR G LE  F     +   G +  V   + L+ GLC   R D A 
Sbjct: 86  VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEAT 145

Query: 86  EVLD-EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           ++L   M + G  PD   YNT++    R+  + +A  +F EM  +G+ P++V+++T+I  
Sbjct: 146 DILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDG 205

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             +   +DRA   F++M   G+ PDN  Y  +I+GY   G   E ++M +EM   G   D
Sbjct: 206 LCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPD 265

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            +TY  +L+ LC+     EA   F+ M  +G+ PD   +  L+HG+   G +++  +  D
Sbjct: 266 CITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLD 325

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M    + P+   +N +   + K   +E+A  ++  M  + +SP+ +S+G LI+  C +G
Sbjct: 326 LMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLG 385

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A   + +M+ +G+ P +   ++++ G C  G   KA+E   +++ +G+  D++ +N
Sbjct: 386 RVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFN 445

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TL+     E  + +A  L+  M   G+ P+VI+YN ++ G C  GR+ ++  +L  M+  
Sbjct: 446 TLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSN 505

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GL P+  TYT L+ G+     + +A+    EML +G  P
Sbjct: 506 GLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTP 544



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 216/415 (52%), Gaps = 11/415 (2%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI---FCEMSRR---GVAPDI 135
           D A ++ DE+L          +N LL    R    S +E +   F  M+R     VAP+ 
Sbjct: 31  DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA---LKM 192
            ++S LIG F R G+L+     F  +   G   + ++ + ++ G C    V EA   L +
Sbjct: 91  CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
           R  M E GC  DVV YNT++NG  R   + +A +LF EM+++G+ P+  T+TT+I G CK
Sbjct: 151 R--MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCK 208

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
              +++A  +F  M  + +KPD  TYN LI G+   G+ ++  ++  +M +  + P+ I+
Sbjct: 209 AQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCIT 268

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y +L++  C  G   EA   +  M  KGIKP +     ++ GY   G  S+   FL  MV
Sbjct: 269 YALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMV 328

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
             GV P+   +N +   + ++  +++A  + +KM  QGL PDV+++  ++   C+ GR+ 
Sbjct: 329 GNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD 388

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           D+ L   +MI +G+ P+   +++L+ G  +    ++A     E+L +G   D  F
Sbjct: 389 DAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVF 443



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 213/405 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M  A  K   I+ A     +M Q+G+ PD V++  LI+A C+ G +++A    N M  +G
Sbjct: 342 MFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEG 401

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +F ++SL+ GLC  G+ ++A+E+  E+L  G+  D   +NTL+   C +  + EA+
Sbjct: 402 VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQ 461

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R GV P+++S++TL+      G++D A      M S GL P+   YTI++ GY
Sbjct: 462 RLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGY 521

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +A  +  EML KG    V TYNTIL+GL +    +EA++L+  M+      D 
Sbjct: 522 CKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDI 581

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+  +++G CK+  +++A  +F  +  K  + D VT+N +I    K G  E A  L+A 
Sbjct: 582 YTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFAT 641

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +  + P+ ++Y ++       G + E   L+  M   G  P     N +++     GD
Sbjct: 642 ISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGD 701

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            S+A  +L K+  +    ++ + + LI+ + R E    A +L  K
Sbjct: 702 ISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSLPEK 746



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 209/411 (50%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL  M   GV P+   +N +  AY ++  +EEA  + N M  +GL P V ++ +LI+ LC
Sbjct: 323 FLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALC 382

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K GR D A    ++M+  G++P+   +++L+   C      +AEE+F E+  +G+  D V
Sbjct: 383 KLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAV 442

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
            F+TL+      G++  A      M   G+ P+ + Y  ++ G+C  G + EA K+ D M
Sbjct: 443 FFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVM 502

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           +  G   +  TY  +L G C+A+ + +A  LF EML +GV P   T+ T++HG  + G  
Sbjct: 503 VSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRF 562

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A  L+  M     K DI TYN +++G CK   +++A K++  + S+    + +++ I+
Sbjct: 563 SEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIM 622

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I      G   +A  L+  +   G+ P +V+   I +     G   + D   S M   G 
Sbjct: 623 IGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGT 682

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
            P+S   N L+   +   ++ +A   + K++ +    +  T +++++ + R
Sbjct: 683 APNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSR 733


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 163/490 (33%), Positives = 262/490 (53%), Gaps = 7/490 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC++ ++D A   L    + G  PD VTYN  I+  C+   +++AFQL+  M  K 
Sbjct: 13  VINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 72

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY +L++GL K GR D A  VL++M++ G SP   TY  ++    +   + EA 
Sbjct: 73  CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEAR 132

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS----AGLVPDNVLYTII 176
            IF +M   G  PD   ++ LI    ++G+ + A   ++E  +    A  VPD V YT +
Sbjct: 133 RIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSL 192

Query: 177 INGYCRNGFVLEALKM-RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           I+G C+ G +LEA ++  DE +E+G + D VTY +I++GLC+   + E  + F+EM  RG
Sbjct: 193 IDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 252

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             PD  T+  LI G  K   + KA  ++  M Q       VTYN ++DG CK G + +A 
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 312

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
             +  M  R      ++Y  L++G+CS G+V+ A  L+  M+ +G +P LVS N II+G 
Sbjct: 313 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 372

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV-REENMDKAFALVSKMENQGLVPD 414
           CR+G  +KA  +  K++   + PD  ++N  ++G   R + +     L   M +QG  P+
Sbjct: 373 CRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPN 432

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           + +Y++++ G CR G +  +  I   M+ +G+ PD   + TLI        + EA     
Sbjct: 433 LHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFR 492

Query: 475 EMLQRGFVPD 484
           E L+R   PD
Sbjct: 493 E-LERRSAPD 501



 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 152/463 (32%), Positives = 247/463 (53%), Gaps = 6/463 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD V +  +IN  CRE  L+EAF ++      G +P   TYN  I+GLCK  R D A ++
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L +M +    P T TY  L+    +   + EA  +  +M  +G +P + +++ +I   S+
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG----CVM 203
            G+++ A   F +M   G  PD  +YT +I G C++G   EA  +  E   +      V 
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFN-EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           DVVTY ++++GLC+A  + EA  +F+ E +ERG  PD  T+T++I G CK G + +    
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  M  +  +PD VTY  LIDGF K   + KA++++  M+      + ++Y I+++G C 
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V EA+  +  M  +G   T+V+ + ++ G+C  G+ S A E   +M+  G +P+ +S
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC-RQGRMHDSELILWRM 441
           YN +I G  R   + KA+    K+  + L PDV T+N  L G C R   + D   +   M
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + +G +P+  +Y+ L++G      L+ A     EM+ RG  PD
Sbjct: 425 VSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPD 467



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 211/396 (53%), Gaps = 5/396 (1%)

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           M  SPD   +  ++   CR++ + EA  +     R G  PD V+++  I    +  ++D 
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A    ++M     +P  V YT +++G  + G + EA+ + ++M+EKG    + TY  +++
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK---- 269
           GL +A  + EA  +F +ML  G  PD + +T LI G CK G   +A  L+     +    
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWAD-MISRKISPNYISYGILINGYCSMGHVTE 328
           +  PD+VTY +LIDG CK G + +A +++ D  + R   P+ ++Y  +I+G C +G V E
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
               ++EM  +G +P  V+   +I G+ ++    KA     +M+  G    +++YN +++
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  +   + +A+A    ME +G V  V+TY+ ++ GFC +G +  +  +  RM+++G  P
Sbjct: 301 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  +Y  +I G      L +A+ + +++LQR   PD
Sbjct: 361 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPD 396



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 188/345 (54%), Gaps = 3/345 (0%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++ LCK  +I ++ ++F  E  ++G  PD VTY ++I+  C+ G +EE  +  + M  +
Sbjct: 192 LIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR 251

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P   TY +LI+G  K     +A  V  +MLQ G    T TYN +L   C+   ++EA
Sbjct: 252 GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 311

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
              F  M  RG    +V++S L+  F   G +  A+  FR M   G  P+ V Y III G
Sbjct: 312 YATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRG 371

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC-RAKMLTEADDLFNEMLERGVFP 238
            CR G + +A    +++L++    DV T+N  L+GLC R   +++  +LF  M+ +G  P
Sbjct: 372 LCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSP 431

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           + ++++ L+ G C+ G +  AL +F  M  + + PD+V +NTLI   C  G +++A +++
Sbjct: 432 NLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF 491

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
            ++  R+ +P+  SY  L++G      + EA  L + M  +G  P
Sbjct: 492 REL-ERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 135/246 (54%), Gaps = 2/246 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  A      ME++G     VTY+ L++ +C EG +  A +L   M  +G
Sbjct: 298 ILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK-ENMSEA 119
            +P + +YN +I GLC+ G+  +A    +++LQ  L PD  T+N  L   C++ + +S+ 
Sbjct: 358 CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDG 417

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+F  M  +G +P++ S+S L+    R G L+ AL  FREM S G+ PD V++  +I  
Sbjct: 418 VELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRW 477

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C  G V EAL++  E LE+    D  +Y ++L+GL R + + EA  L   M  +G  P 
Sbjct: 478 LCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPR 536

Query: 240 FYTFTT 245
            Y  T 
Sbjct: 537 HYDLTV 542


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 275/484 (56%), Gaps = 4/484 (0%)

Query: 5   LCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK- 62
           LC   + D A  + L  M   G  P+ ++YNT+I + C +   +EA  ++  M+ +G + 
Sbjct: 201 LCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC 260

Query: 63  -PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P V ++N++I+G  K+G   +A  +++EM+Q G+ PD  TYN+++   C+   M +AE 
Sbjct: 261 SPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAEL 320

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  +M  +GV PD ++++ +I  +S +G    +   FR+M S GL+P  V +   ++  C
Sbjct: 321 VLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLC 380

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++G   +A ++   M  KG + D+V+Y+ +L+G        + ++LF+ M ++G+  + +
Sbjct: 381 KHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCH 440

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            F  LI  H K G M++A+ +F  M  + ++PD+VTY+TLI  FC++G +  A + ++ M
Sbjct: 441 CFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQM 500

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI-KPTLVSCNTIIKGYCRSGD 360
           IS  + PN + Y  LI+G+C  G + +A  L  EM+ KGI +P +V  ++II   C  G 
Sbjct: 501 ISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGR 560

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  + ++  G  P  +++N+LI+G+     M+KAF ++  M + G+ PDV+TYN 
Sbjct: 561 VMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNT 620

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G+C+ G++ D  ++   M+ K + P   TY+ +++G         A +   EM+  G
Sbjct: 621 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSG 680

Query: 481 FVPD 484
              D
Sbjct: 681 TAVD 684



 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 267/484 (55%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +D A++ L +M  KGV PD +TY  +I+ Y   G  +E+ ++   M+ KG
Sbjct: 305 IVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG+ T+NS ++ LCK GR   A+E+   M   G  PD  +Y+ LL     +   ++  
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN 424

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+ +G+  +   F+ LI   ++ G +D A++ F EM+  G+ PD V Y+ +I+ +
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV-FPD 239
           CR G + +A++   +M+  G   + V Y+++++G C    L +A +L +EM+ +G+  P+
Sbjct: 485 CRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPN 544

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F+++IH  C +G +  A ++F+++     +P IVT+N+LIDG+C VG+MEKA  +  
Sbjct: 545 IVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 604

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+S  I P+ ++Y  L++GYC  G + +   L+ EM+ K +KPT V+ + ++ G   +G
Sbjct: 605 AMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAG 664

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S A +   +M+  G   D  +Y  L+ G  R +  D+A  L  K+       D+   N
Sbjct: 665 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 724

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++    +  R  ++  +   +   GL P+ STY  +I+  + + +++EA      M + 
Sbjct: 725 TVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKS 784

Query: 480 GFVP 483
           G  P
Sbjct: 785 GCAP 788



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 258/504 (51%), Gaps = 59/504 (11%)

Query: 28  PDTVTYN-------TLINAYCREGFLEEAFQLMNSMSGKGLKP-GVFTYNSLINGLCKKG 79
           PD+V+ +        L N  CRE             +G  + P  V TY  L++  C+  
Sbjct: 123 PDSVSCSNGPALVLALFNRICREE------------AGPRVAPLSVHTYGILMDCCCRAR 170

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE-MSRRGVAPDIVSF 138
           R D        +L+ GL   T   NT L   C  +   EA ++    MS  G  P+ +S+
Sbjct: 171 RPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISY 230

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAG--LVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +T+I     + +   AL   + M   G    PD V +  +I+G+ + G V +A  + +EM
Sbjct: 231 NTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEM 290

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           ++KG   DVVTYN+I++ LC+A+ + +A+ +  +M+++GV PD  T+T +IHG+   G+ 
Sbjct: 291 VQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHW 350

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            ++  +F  MT K + P IVT+N+ +   CK G  + A +++  M ++   P+ +SY IL
Sbjct: 351 KESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSIL 410

Query: 317 INGYCSMGHVT-----------------------------------EAFRLWYEMVGKGI 341
           ++GY + G                                      EA  ++ EM G+G+
Sbjct: 411 LHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGV 470

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
           +P +V+ +T+I  +CR G  + A E  S+M+S G++P+++ Y++LI+GF    ++ KA  
Sbjct: 471 RPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKE 530

Query: 402 LVSKMENQGLV-PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
           LVS+M ++G+  P+++ ++ I+   C +GR+ D+  +   +I  G  P   T+ +LI+G+
Sbjct: 531 LVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGY 590

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPD 484
                +++AF   D M+  G  PD
Sbjct: 591 CLVGKMEKAFGVLDAMVSVGIEPD 614



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 207/372 (55%), Gaps = 1/372 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K   +D A +   EM+ +GV PD VTY+TLI+A+CR G L +A +  + M   G
Sbjct: 445 LISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIG 504

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKENMSEA 119
           L+P    Y+SLI+G C  G   +AKE++ EM+  G+  P+   +++++   C +  + +A
Sbjct: 505 LEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDA 564

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++F  +   G  P IV+F++LI  +   G++++A      M S G+ PD V Y  +++G
Sbjct: 565 HDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSG 624

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC++G + + L +  EML K      VTY+ +L+GL  A   + A  +F+EM++ G   D
Sbjct: 625 YCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVD 684

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+ G C++   ++A+ LF  +     K DI   NT+I+   KV   E+AN L+A
Sbjct: 685 IDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFA 744

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +YG++I+     G V EA  ++  M   G  P+    N II+   + G
Sbjct: 745 AISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 804

Query: 360 DASKADEFLSKM 371
           D  KA  ++SK+
Sbjct: 805 DIVKAGYYMSKV 816



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 168/333 (50%), Gaps = 1/333 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++  C    +  AK  + EM  KG+  P+ V ++++I++ C EG + +A  + N +   
Sbjct: 515 LIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHI 574

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P + T+NSLI+G C  G+ ++A  VLD M+ +G+ PD  TYNTL+   C+   + + 
Sbjct: 575 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG 634

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM  + V P  V++S ++      G+   A   F EM  +G   D   Y I++ G
Sbjct: 635 LILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 694

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CRN    EA+ +  ++    C  D+   NT++N L + +   EA+DLF  +   G+ P+
Sbjct: 695 LCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPN 754

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +IH   K+G++ +A  +F  M +    P     N +I    + G++ KA    +
Sbjct: 755 VSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMS 814

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            +    IS    +  +L++ + S G   E  + 
Sbjct: 815 KVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 847


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 260/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +D A+ FL +M  KGV PD  TYN LI  Y   G  +EA ++   M  + 
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V   N+L+  LCK G+   A++V D M   G +PD  +Y  +L     K  + +  
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   G+AP I +F+ LI  ++  G LD+A++ F EM+  G+ P  V Y  +I   
Sbjct: 382 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A++  ++M+++G V D   Y+ ++ G C    L +A +L +E++  G+  D 
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++I+  CK G +  A N+FD+     + PD V YN L+DG+C VG+MEKA +++  
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I PN + YG L+NGYC +G + E   L+ EM+ KGIKP+ +  N II G   +G 
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M   G+  +  +Y+ ++ G  +    D+A  L  ++    +  D+IT N 
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  +  R+ +++ +   +   GL P   TY+ +I   + +  ++EA      M   G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 741

Query: 481 FVPD 484
             PD
Sbjct: 742 CEPD 745



 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 262/480 (54%), Gaps = 3/480 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ-LMNSMSGKGLKPGV 65
           + H+ + A  F  ++ + G+  D +  + L+  +C     +EA   L++     G  P V
Sbjct: 125 RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 184

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGL--SPDTATYNTLLVESCRKENMSEAEEIF 123
           F+YN L+  LC +G+  +A ++L  M + G   SPD   YNT++    ++ ++++A ++F
Sbjct: 185 FSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLF 244

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +RG+ PD+V++S+++    +   +D+A  + R+M + G++PDN  Y  +I GY   
Sbjct: 245 KEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 304

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G   EA+++  EM  +  + DVV  NT++  LC+   + EA D+F+ M  +G  PD +++
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           T +++G+   G +    +LFD+M    I P I T+N LI  +   G ++KA  ++ +M  
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRD 424

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             + P+ ++Y  +I   C +G + +A   + +M+ +G+ P   + + +I+G+C  G   K
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK 484

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E +S++++ G+  D + + ++IN   +   +  A  +     N GL PD + YN+++ 
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 544

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+C  G+M  +  +   M+  G+ P+   Y TL+NG+     + E      EMLQ+G  P
Sbjct: 545 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 236/460 (51%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P + TY  L++   R    E A      +   GL+      + L+ G C+  R D A ++
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 88  L-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV--APDIVSFSTLIGI 144
           L     ++G  PD  +YN LL   C +    +A+++   M+  G   +PD+V+++T+I  
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G +++A   F+EM   G+ PD V Y+ +++  C+   + +A     +M+ KG + D
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             TYN ++ G        EA  +F EM  + + PD     TL+   CK G + +A ++FD
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K   PD+ +Y  +++G+   G +     L+  M+   I+P   ++ +LI  Y + G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 410

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A  ++ EM   G+KP +V+  T+I   CR G    A E  ++M+ +GV PD  +Y+
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI GF    ++ KA  L+S++ N G+  D++ +  I+   C+ GR+ D++ I    +  
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL+PD   Y  L++G+     +++A R  D M+  G  P+
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 215/458 (46%), Gaps = 50/458 (10%)

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-------AEEIFCEMSRRGVA 132
           R + A ++LDE+ + G        N  L    R  + +        A  +F   + R   
Sbjct: 46  RPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQG 105

Query: 133 PDIVS-----FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           P ++S     ++ L+   +R  + + AL +F ++   GL  D ++ + ++ G+C      
Sbjct: 106 PRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTD 165

Query: 188 EALK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF--PDFYTFT 244
           EAL  +     E GCV DV +YN +L  LC      +ADDL   M E G    PD   + 
Sbjct: 166 EALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           T+I G  K+G++NKA +LF  M Q+ I PD+VTY++++   CK   M+KA      M+++
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + P+  +Y  LI GY S G   EA R++ EM  + I P +V+ NT++   C+ G   +A
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVRE------------------------------- 393
            +    M  +G +PD  SY  ++NG+  +                               
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 405

Query: 394 ----ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                 +DKA  + ++M + G+ P V+TY  ++   CR G+M D+     +MI++G+ PD
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           +  Y  LI G  +  +L +A     E++  G   D  F
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 503


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 265/463 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL K   +D A + L  M + G  P+ +T+N+L++ YC  G   +A  +   M   G
Sbjct: 244 IISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDG 303

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P VFTYN+L+  LCK GR   A+++ D M++ G  P++ATY TLL     + ++ +  
Sbjct: 304 VEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMH 363

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ PD   F+ LIG ++++G++D A++ F +M+  GL PD V Y I+++  
Sbjct: 364 HLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDAL 423

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A+     ++ +G   D V +  +++GLC      +A++L  EM+ RG+ P+ 
Sbjct: 424 CMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNN 483

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F TL++  CK+G + +A N+FD+M +  ++ D++TYNTLIDG+C  G++++A KL   
Sbjct: 484 IFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEG 543

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN ++Y  +INGYC  G + +AF L+ +M  KG+ P +V+ +TI++G  ++  
Sbjct: 544 MVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARR 603

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    M+  G+  D  +YN ++ G  +    D A  +   +       +  T+N+
Sbjct: 604 TAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNI 663

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           ++    + GR  +++ +   ++ +GL P+  TY  ++   + Q
Sbjct: 664 MIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQ 706



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 251/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKD-HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++N L ++  ++D+A     +M  +G+ PD VTYN++I+A  +   +++A  ++  M   
Sbjct: 208 VINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKN 267

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P   T+NSL++G C  G+ + A  V   M + G+ PD  TYNTL+   C+     EA
Sbjct: 268 GAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEA 327

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +IF  M +RG  P+  ++ TL+  ++  G L +       M   G+ PD+ ++ I+I  
Sbjct: 328 RKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGT 387

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y ++G V +A+ +  +M  +G   D VTY  +++ LC    + +A   F  ++  G+ PD
Sbjct: 388 YTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPD 447

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F  LIHG C     +KA  L   M  + I P+ + +NTL++  CK G + +A  ++ 
Sbjct: 448 AVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFD 507

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+   +  + I+Y  LI+GYC  G V EA +L   MV  G+KP  V+ NT+I GYC++G
Sbjct: 508 LMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNG 567

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A     +M S+GV+P  ++Y+T++ G  +      A  L   M   G+  D+ TYN
Sbjct: 568 RIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYN 627

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +IL G C+     D+  I   +     + +  T+  +I+  +      EA      +L R
Sbjct: 628 IILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLAR 687

Query: 480 GFVPD 484
           G VP+
Sbjct: 688 GLVPN 692



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 242/500 (48%), Gaps = 42/500 (8%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P+ +TY+ +I+   R G L+ AF  +  +   G      T++ L+  LC K R   A 
Sbjct: 87  VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146

Query: 86  EV-LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-----SRRGVAPDIVSFS 139
           ++ L  M  +G +P+  +Y  LL   C +    +A  +   M     +R G  PD+VS++
Sbjct: 147 DIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYN 206

Query: 140 TLIGIFSRNG-QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           T+I    R G QLD A   F +M   GL PD V Y  II+   +   + +A  +   M++
Sbjct: 207 TVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVK 266

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G + + +T+N++L+G C +    +A  +F  M   GV PD +T+ TL+   CK+G   +
Sbjct: 267 NGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSME 326

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  +FD M ++  KP+  TY TL+ G+   G + K + L   M+   I P++  + ILI 
Sbjct: 327 ARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIG 386

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            Y   G V +A  L+ +M  +G+ P  V+   ++   C  G    A     +++SEG+ P
Sbjct: 387 TYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTP 446

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVP------------------------- 413
           D++ +  LI+G    +  DKA  L  +M  +G+ P                         
Sbjct: 447 DAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIF 506

Query: 414 ----------DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
                     DVITYN ++ G+C  G++ ++  +L  M+  G+ P+  TY T+ING+   
Sbjct: 507 DLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKN 566

Query: 464 NNLKEAFRFHDEMLQRGFVP 483
             +++AF    +M  +G  P
Sbjct: 567 GRIEDAFSLFRQMASKGVNP 586



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 224/436 (51%), Gaps = 7/436 (1%)

Query: 50  FQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVE 109
           F+ M  ++   + P + TY+ +I+   + G  D A   L  +++ G + +  T++ LL  
Sbjct: 76  FRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKA 135

Query: 110 SCRKENMSEAEEI-FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---- 164
            C K+  SEA +I    M   G  P++ S++ L+       +  +AL     M  A    
Sbjct: 136 LCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTR 195

Query: 165 -GLVPDNVLYTIIINGYCRNGFVLE-ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
            G  PD V Y  +ING  R G  L+ A  + D+ML++G   DVVTYN+I++ L +A+ + 
Sbjct: 196 GGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMD 255

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           +A  +   M++ G  P+  T  +L+HG+C  G  N A+ +F  M +  ++PD+ TYNTL+
Sbjct: 256 KAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLM 315

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
              CK G   +A K++  M+ R   PN  +YG L++GY + G + +   L   MV  GI+
Sbjct: 316 GYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQ 375

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P     N +I  Y + G    A    SKM  +G++PD+++Y  +++       +D A A 
Sbjct: 376 PDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ 435

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             ++ ++GL PD + +  ++ G C + +   +E +   MI +G+ P+   + TL+N    
Sbjct: 436 FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCK 495

Query: 463 QNNLKEAFRFHDEMLQ 478
           +  +  A    D M++
Sbjct: 496 EGMVARAKNIFDLMVR 511



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 200/371 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++    K  K+D A +   +M ++G+ PDTVTY  +++A C  G +++A      +  +G
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG 443

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    + +LI+GLC + + D+A+E+  EM+  G+ P+   +NTLL   C++  ++ A+
Sbjct: 444 LTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAK 503

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  M R  V  D+++++TLI  +  +G++D A      M   G+ P+ V Y  +INGY
Sbjct: 504 NIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGY 563

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG + +A  +  +M  KG    +VTY+TIL GL +A+    A +L+  M++ G+  D 
Sbjct: 564 CKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDI 623

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++ G C++   + AL +F  +       +  T+N +ID   K G  ++A  L+A 
Sbjct: 624 GTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFAS 683

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +++R + PN ++Y +++      G + E   L+  +   G        N ++    + G+
Sbjct: 684 LLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGE 743

Query: 361 ASKADEFLSKM 371
             KA  +LSK+
Sbjct: 744 VRKAGVYLSKI 754



 Score = 41.6 bits (96), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 53/108 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++AL K  + D AK     +  +G+ P+ VTY  ++ +   +G LEE   L  S+   G
Sbjct: 664 MIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNG 723

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
                   N+L+  L +KG   +A   L ++ +   S + +T  +L++
Sbjct: 724 CTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLVL 771


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 149/452 (32%), Positives = 258/452 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   +  ++D     L ++ + G+    VT+NTLIN  C+ G   +A +L + M  +G
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY ++INGLCK G    A  +  +M + G  PD  TY+T++   C+   ++EA 
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M  +G++P+I ++++LI       +   A     EM S  ++P+ V ++++IN +
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  +   M E G   +VVTY++++NG      + EA  LF+ M+ +G  PD 
Sbjct: 343 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDV 402

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  LI+G+CK   + +A  LF+ M  + + PDIV+YNTLIDG C++G + +A+ L+ +
Sbjct: 403 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 462

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    P+  +Y IL++G+C  G++ +AFRL+  M    +KP +V  N +I   C+S +
Sbjct: 463 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRN 522

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +  S++  +G+ P+   Y T+ING  +E  +D+A      ME  G  P+  +YNV
Sbjct: 523 LKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           I+ GF +      +  ++  M EKG   D +T
Sbjct: 583 IIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 154/487 (31%), Positives = 268/487 (55%), Gaps = 1/487 (0%)

Query: 1   MVNALCK-DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++A+ K  H  D+      +ME  G+ PDT T + LIN + +   ++  F ++  +   
Sbjct: 127 LLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKL 186

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL+  + T+N+LINGLCK G+  +A E+ D+M+  G  PD  TY T++   C+      A
Sbjct: 187 GLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAA 246

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F +M   G  PD+V++ST+I    ++ +++ AL  F  MK+ G+ P+   Y  +I G
Sbjct: 247 AGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQG 306

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C      EA  M +EM+    + ++VT++ ++N  C+   + EA  +   M E GV P+
Sbjct: 307 LCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPN 366

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+++L++G+     + +A  LFD+M  K  KPD+ +YN LI+G+CK   + +A +L+ 
Sbjct: 367 VVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFN 426

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +MI + ++P+ +SY  LI+G C +G + EA  L+  M+  G  P L + + ++ G+C+ G
Sbjct: 427 EMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQG 486

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             +KA      M S  + P+ + YN LI+   +  N+ +A  L S++  QGL P+V  Y 
Sbjct: 487 YLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYT 546

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            I+ G C++G + ++      M E G  P+  +Y  +I G +   +   A +   EM ++
Sbjct: 547 TIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREK 606

Query: 480 GFVPDDA 486
           GFV D A
Sbjct: 607 GFVADVA 613


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 279/484 (57%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ + D A     EM  +G+ P+ VTY  LI+A C+ G +E+A  L + M  KG
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+ YNSLING CK+G  DRA+ +L  M++ GL+P  A+Y+ L+   CR  ++S A 
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM+ RG+A +  +F+ LI  F ++ ++D A   F +M  + ++P+ V + ++I GY
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A ++ D+M+E G   D  TY ++++GLC    +++A++   ++       + 
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++ T L++G  ++G   +  +L+D M  + +K D+V++  ++    K  + EK+  L+ +
Sbjct: 584 FSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+ I Y  +I+      ++ +A   W +MV  G  P  V+   +I   C+SG 
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGY 703

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A+    +M++  V P+  +YN  ++ F  E +M+KA  L S M  QG +  ++++N+
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 762

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ ++  ++ ++ E G +PD  +Y+T+I+      ++ +AF   +EML +G
Sbjct: 763 LIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 481 FVPD 484
             PD
Sbjct: 823 LKPD 826



 Score =  278 bits (710), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 248/478 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+  +++ A     +M + G  P     + +I+   ++  +EEAF L   +   G
Sbjct: 274 LVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLG 333

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF YN+LI+ LCK  R D A  +  EM   GL P+  TY  L+   C++  + +A 
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G+   +  +++LI  + + G LDRA      M   GL P    Y+ +I G 
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG +  A+++  EM E+G   +  T+  ++NG C+ K + EA  LF++M++  V P+ 
Sbjct: 454 CRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  +I G+C  GN+ KA  L+D M +  +KPD  TY +LI G C    + KAN+  AD
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +     N  S   L+ G    G  TE + LW EM  +G+K  LVS   I+    +  D
Sbjct: 574 LENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K+     +M  +GV PD I Y  +I+   +EENM +A     +M   G  P+ +T+ V
Sbjct: 634 KEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTV 693

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++   C+ G +  +EL+   M+   + P++ TY   ++   ++ ++++A   H  MLQ
Sbjct: 694 LINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ 751



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 268/483 (55%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A C+   +D A+  +  ME +GV    V YN L+   C+   ++EA ++ N M   G+
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
                TY +L+ G C+    + A  +  +M+++G  P  A  + ++ E  +KE + EA  
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           + C++   G+ P++ +++ LI    +N + D A   F+EM   GL P+ V Y I+I+  C
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G + +AL + D+M +KG  + V  YN+++NG C+   L  A  L + M++ G+ P   
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           +++ LI G C++G+++ A+ L   M ++ I  +  T+  LI+GFCK  +M++A +L+  M
Sbjct: 445 SYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           I   + PN +++ ++I GYC +G++ +AF+L+ +MV  G+KP   +  ++I G C +   
Sbjct: 505 IDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 564

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           SKA+EF++ + +     ++ S   L+ G  RE    + + L  +M  +G+  D++++ +I
Sbjct: 565 SKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTII 624

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +    +Q     S ++   M E+G+ PD   YT +I+    + N+ +A    D+M+  G+
Sbjct: 625 VYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGY 684

Query: 482 VPD 484
            P+
Sbjct: 685 SPN 687



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 254/484 (52%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +L K  +   A+    +M Q GV+ D   Y   I AYC    L+ A  L+  M  +G+K 
Sbjct: 172 SLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKA 231

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
               YN L+ GLCK  R   A EV + M+ +G++ D  TY TL+   CR E +  A  I 
Sbjct: 232 SAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRIT 291

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M R G  P   + S +I    +   ++ A     ++   G+VP+   Y  +I+  C+N
Sbjct: 292 HDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
               +A ++  EM  +G   + VTY  +++ LC+  M+ +A  LF++M ++G+    Y +
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +LI+G+CK G++++A  L   M ++ + P   +Y+ LI G C+ G++  A +L  +M  
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAE 471

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R I+ N  ++  LING+C    + EA RL+ +M+   + P  V+ N +I+GYC  G+  K
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A +   +MV  G+ PD+ +Y +LI+G      + KA   V+ +EN   V +  +   +L 
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G  R+GR  ++  +   M  +G+  D  ++T ++   + Q++ +++     EM ++G  P
Sbjct: 592 GLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651

Query: 484 DDAF 487
           DD F
Sbjct: 652 DDIF 655



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 212/389 (54%), Gaps = 1/389 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CKD K+D A     +M    V P+ VT+N +I  YC  G + +AFQL + M   G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TY SLI+GLC      +A E + ++       +  +   LL    R+   +E  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETY 603

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+ RGV  D+VSF+ ++    +    +++ + FREMK  G+ PD++ YT +I+  
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   +++AL   D+M+  G   + VT+  ++N LC++  L  A+ L  EML   V P+ 
Sbjct: 664 SKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+   +     +G+M KA +L   M Q  +   IV++N LI G CK G++++A  L   
Sbjct: 724 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMRK 782

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +     SP+ ISY  +I+  C MG + +AF LW EM+ KG+KP +V+ N  I+     G+
Sbjct: 783 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGE 842

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLING 389
           + KA    + M+  GV P+  +Y  L++G
Sbjct: 843 SDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 211/399 (52%)

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           VL   L  G++ +  T + +L    +    + A ++F +M + GV  D   ++  I  + 
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
            +  LD A      M+S G+    V Y +++ G C+N  V EA+++++ M+  G   D V
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TY T++ G CR + L  A  + ++M+  G  P     + +I    K   + +A +L   +
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               + P++  YN LID  CK    + A++L+ +M  R + PN ++Y ILI+  C  G +
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A  L+ +M  KGIK T+   N++I GYC+ G   +A   LS MV EG+ P + SY+ L
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G  R  ++  A  L  +M  +G+  +  T+  ++ GFC+  +M ++  +  +MI+  +
Sbjct: 450 IAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            P+  T+  +I G+    N+++AF+ +D+M++ G  PD+
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 211/413 (51%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+    +T + ++  L K  +   A+++ D+MLQ G+  D   Y   +   C   N+  A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +   M   GV    V ++ L+    +N ++  A+     M + G+  D V Y  ++ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR   +  AL++  +M+  G V      + +++ L + +++ EA  L  ++ + G+ P+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            + +  LI   CK+   + A  LF  M  + ++P+ VTY  LI   CK G +E A  L+ 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  + I      Y  LINGYC  G +  A  L   MV +G+ PT  S + +I G CR+G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D S A E   +M   G+  ++ ++  LINGF +++ MD+A  L  KM +  ++P+ +T+N
Sbjct: 458 DLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           V++ G+C  G +  +  +  +M+E GL PD  TY +LI+G    + + +A  F
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 162/487 (33%), Positives = 268/487 (55%), Gaps = 2/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+   +  AK  + +ME  G   + V YN LI+  C++  + EA  +   ++GK 
Sbjct: 233 VIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKE 292

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEA 119
           LKP V TY +L+ GLCK    +   E++DEML++  SP  A  ++L VE  RK   + EA
Sbjct: 293 LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL-VEGLRKRGKVEEA 351

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +   ++  GV+P+I  ++ LI    +    D A + F  M   GL P++V Y+I+I+ 
Sbjct: 352 LNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDM 411

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR G +  AL    EM++ G    V  YN+++NG C+   ++ A+ L  EM+ + + P 
Sbjct: 412 FCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPT 471

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T+L+ G+C  G +NKAL L+  MT K I P I T+ TL+ G  + G +  A KL+ 
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFT 531

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    + PN ++Y ++I GYC  G++++AF    EM+ KGI P   S   +I G C +G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTG 591

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            AS+A  F+  +     + + I Y  L++GF RE  +++A ++   M  +G+  D++ Y 
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYG 651

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++ G  +         +L  M ++GL PD   YT++I+      + KEAF   D M+  
Sbjct: 652 VLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711

Query: 480 GFVPDDA 486
           G VP++ 
Sbjct: 712 GCVPNEV 718



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 161/520 (30%), Positives = 270/520 (51%), Gaps = 37/520 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCK    D A++    M + G+ P+ VTY+ LI+ +CR G L+ A   +  M   G
Sbjct: 373 LIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMG 432

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP V+ YNSLING CK G    A+ ++ EM+   L P   TY +L+   C K  +++A 
Sbjct: 433 LKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+ +G+ P I +F+TL+    R G +  A+  F EM    + P+ V Y ++I GY
Sbjct: 493 RLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGY 552

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A +  +EM+EKG V D  +Y  +++GLC     +EA    + + +     + 
Sbjct: 553 CEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T L+HG C++G + +AL++   M  + +  D+V Y  LIDG  K  + +    L  +
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKE 672

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + P+ + Y  +I+     G   EAF +W  M+ +G  P  V+   +I G C++G 
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732

Query: 361 ASKADEFLSKM-----------------------------------VSEGVDPDSISYNT 385
            ++A+   SKM                                   + +G+  ++ +YN 
Sbjct: 733 VNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNM 792

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW-RMIEK 444
           LI GF R+  M++A  L+++M   G+ PD ITY  +++  CR+  +  + + LW  M EK
Sbjct: 793 LIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA-IELWNSMTEK 851

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G+ PDR  Y TLI+G      + +A    +EML++G  P+
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPN 891



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 255/512 (49%), Gaps = 35/512 (6%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D   +F   M +  + P+  T + L++   +      A +L + M   G++P V+ Y  
Sbjct: 173 LDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTG 232

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +I  LC+     RAKE++ +M   G   +   YN L+   C+K+ + EA  I  +++ + 
Sbjct: 233 VIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKE 292

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + PD+V++ TL+    +  + +  L    EM      P     + ++ G  + G V EAL
Sbjct: 293 LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEAL 352

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +   + E G   ++  YN +++ LC+ +   EA+ LF+ M + G+ P+  T++ LI   
Sbjct: 353 NLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMF 412

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+ G ++ AL+    M    +KP +  YN+LI+G CK G++  A  L A+MI++K+ P  
Sbjct: 413 CRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTV 472

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  L+ GYCS G + +A RL++EM GKGI P++ +  T++ G  R+G    A +  ++
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTE 532

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV--------------- 415
           M    V P+ ++YN +I G+  E NM KAF  +++M  +G+VPD                
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQ 592

Query: 416 --------------------ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
                               I Y  +L GFCR+G++ ++  +   M  +G++ D   Y  
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGV 652

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           LI+G +   + K       EM  RG  PDD  
Sbjct: 653 LIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVI 684



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 223/409 (54%), Gaps = 7/409 (1%)

Query: 83  RAKEVLDEML-------QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           R++ VLD +L       ++ L P+  T + LL    +  +   A E+F +M   G+ PD+
Sbjct: 168 RSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDV 227

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
             ++ +I        L RA     +M++ G   + V Y ++I+G C+   V EA+ ++ +
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKD 287

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           +  K    DVVTY T++ GLC+ +      ++ +EML     P     ++L+ G  K G 
Sbjct: 288 LAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGK 347

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           + +ALNL   + +  + P+I  YN LID  CK    ++A  L+  M    + PN ++Y I
Sbjct: 348 VEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSI 407

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LI+ +C  G +  A     EM+  G+KP++   N++I G+C+ GD S A+  +++M+++ 
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           ++P  ++Y +L+ G+  +  ++KA  L  +M  +G+VP + T+  +L+G  R G + D+ 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +   M E  + P+R TY  +I G+  + N+ +AF F +EM+++G VPD
Sbjct: 528 KLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPD 576



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 209/378 (55%), Gaps = 3/378 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D+ K+F  EM +  V P+ VTYN +I  YC EG + +AF+ +N M  KG+ P  ++Y  L
Sbjct: 525 DAVKLF-TEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL 583

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I+GLC  G+   AK  +D + +     +   Y  LL   CR+  + EA  +  +M  RGV
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
             D+V +  LI    ++      L   +EM   GL PD+V+YT +I+   + G   EA  
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + D M+ +GCV + VTY  ++NGLC+A  + EA+ L ++M      P+  T+   +    
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILT 763

Query: 252 KD-GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           K  G+M KA+ L + +  K +  +  TYN LI GFC+ G ME+A++L   MI   +SP+ 
Sbjct: 764 KGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDC 822

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           I+Y  +I+  C    V +A  LW  M  KGI+P  V+ NT+I G C +G+  KA E  ++
Sbjct: 823 ITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882

Query: 371 MVSEGVDPDSISYNTLIN 388
           M+ +G+ P++ +  T I+
Sbjct: 883 MLRQGLKPNTETSETTIS 900



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 36/277 (12%)

Query: 243 FTTLIHGHCKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           F  LI  + +   +   + +F +M T+ S+ P++ T + L+ G  K      A +L+ DM
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           I+  I P+   Y  +I   C +  ++ A  +  +M   G    +V  N +I G C+    
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREE--------------------------- 394
            +A      +  + + PD ++Y TL+ G  + +                           
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 395 --------NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
                    +++A  LV ++   G+ P++  YN ++   C+     ++EL+  RM + GL
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGL 398

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            P+  TY+ LI+    +  L  A  F  EM+  G  P
Sbjct: 399 CPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKP 435



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 1/175 (0%)

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           + +LI  Y     V +   ++  M+ K  + P + + + ++ G  +      A E    M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           ++ G+ PD   Y  +I      +++ +A  ++ +ME  G   +++ YNV++ G C++ ++
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            ++  I   +  K L PD  TY TL+ G       +      DEML+  F P +A
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEA 333


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  295 bits (755), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 155/469 (33%), Positives = 258/469 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VNALCK   +D A+  L +M  KGV PD  TYN+LI  Y   G  +EA ++   M+ +G
Sbjct: 257 VVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQG 316

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T NSL+  LCK G+   A++V D M   G   D  +Y  +L     K  + +  
Sbjct: 317 ILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLT 376

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M   G+APD   F+ LI  +++ G LDRA + F EM+  G+ PD V Y+ +I   
Sbjct: 377 ELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A++  ++M+++G    + TY+ ++ G C    L +A DL  +M+ +G+ PD 
Sbjct: 437 CRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDI 496

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  +I+  CK G +  A N+FD      + P+++ YNTL+DG+C VG+ME A +++  
Sbjct: 497 GCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDV 556

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I PN + YG L+NGYC +G + E   L+ E++ KGIKP+    N I+ G  ++G 
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M   G+  D  +Y+ ++ G  +    D+A  L  ++    +  D+ T N+
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++ G  +  R+ +++ +   +   GL P   TY+ ++   + +  ++EA
Sbjct: 677 MIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEA 725



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 254/478 (53%), Gaps = 2/478 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV--YPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++ +LC D K   A   L  M + G    P+ V YNT+I+ + +EG + +A  L N M  
Sbjct: 185 VLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQ 244

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G+ P + TYN ++N LCK    D+A+ +L +M+  G+ PD  TYN+L+          E
Sbjct: 245 RGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKE 304

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  +M+ +G+ PD+V+ ++L+    ++G++  A   F  M   G   D   Y I++N
Sbjct: 305 AVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLN 364

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G +++  ++ + ML  G   D   +N ++    +  ML  A  +FNEM E+GV P
Sbjct: 365 GYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEP 424

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T++T+I   C+ G M+ A+  F+ M  + + P I TY+ LI GFC  G++ KA  L 
Sbjct: 425 DVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLV 484

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+++ + P+   +  +IN  C +G V +A  ++   +  G+ P ++  NT++ GYC  
Sbjct: 485 LQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLV 544

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A      MVS G+ P+ + Y TL+NG+ +   +D+  +L  ++ ++G+ P    Y
Sbjct: 545 GKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLY 604

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           N+IL G  + GR   +++    M E G+  DR TY+ ++ G    +   EA     E+
Sbjct: 605 NIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKEL 662



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 232/460 (50%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   TY  L++   R    +        +   GL       ++L+ GLC+  R   A ++
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165

Query: 88  L-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA--PDIVSFSTLIGI 144
           L   M  +G  PD  +Y  +L   C      +A+E+   M+  G    P+ V+++T+I  
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G +++A   F EM   G+ PD   Y  ++N  C+   + +A  +  +M++KG + D
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             TYN+++ G        EA  +  +M  +G+ PD  T  +L+   CK G +  A ++FD
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K  K DI +Y  +++G+   G +    +L+  M+S  I+P+   + +LI  Y   G
Sbjct: 346 SMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCG 405

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +  A  ++ EM  +G++P +V+ +T+I   CR G    A E  ++M+ +GV P   +Y+
Sbjct: 406 MLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH 465

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI GF    ++ KA  LV +M N+G+ PD+  +N I+   C+ GR+ D++ I    I  
Sbjct: 466 FLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISI 525

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL+P+   Y TL++G+     ++ A R  D M+  G  P+
Sbjct: 526 GLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 1/248 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   K+++A      M   G+ P+ V Y TL+N YC+ G ++E   L   +  KG
Sbjct: 537 LMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG 596

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP    YN +++GL + GR   AK    EM + G++ D  TY+ +L    +     EA 
Sbjct: 597 IKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAI 656

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E+    V  DI + + +I    +  +++ A   F  +  +GLVP  V Y+I++   
Sbjct: 657 LLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNL 716

Query: 181 CRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            + G V EA  M   M   GC   +    N ++  L   + +  A    +++ ER    D
Sbjct: 717 IKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLD 776

Query: 240 FYTFTTLI 247
             T T LI
Sbjct: 777 HSTTTLLI 784



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 9/188 (4%)

Query: 304 RKISPNYISYGILINGYCSMGH---VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           R +SP   +YGIL++  C+  H   +T AF       G GI   ++S   +++G C +  
Sbjct: 102 RVLSPTLHTYGILMD-CCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS--NLLRGLCEAKR 158

Query: 361 ASKA-DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV--PDVIT 417
            ++A D  L +M   G  PD  SY  ++     +    +A  L+  M   G V  P+ + 
Sbjct: 159 TAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVA 218

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN ++ GF ++G ++ +  +   M+++G++PD STY  ++N       + +A     +M+
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMV 278

Query: 478 QRGFVPDD 485
            +G +PD+
Sbjct: 279 DKGVLPDN 286


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 155/465 (33%), Positives = 248/465 (53%), Gaps = 11/465 (2%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            L  + Q G+ P     N +++       L+EA +L   +  K     V +YN L+  LC
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRLP----LDEAIELFQELPHKN----VCSYNILLKALC 270

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
             GR   A+++ DEM     +PD  TY  L+   C    +  A ++  EM   GV P+  
Sbjct: 271 DAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
            +++++ +    G +  AL    +M    ++ D  LYT +++G+C  G ++ A +  DEM
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             KG   D VTY T++NGLCRA  L EA+ L  EM  R +  D  T+T LI G+CK G M
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            +A  + + M Q+ + P++VTY  L DG CK G+++ AN+L  +M ++ +  N  +Y  L
Sbjct: 448 AEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 507

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ING C  G++ +A R   +M    +KP + +  T+I   C+SGD  +A   L +M+ +G+
Sbjct: 508 INGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGI 567

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P  ++YN L+NGF     ++    L+  M  + + P+  TYN ++  +C +  M  +  
Sbjct: 568 KPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTE 627

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           I   M  + + P+ +TY  LI GH    N+KEA  FHDEM+Q+GF
Sbjct: 628 IYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGF 672



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 150/482 (31%), Positives = 259/482 (53%), Gaps = 3/482 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC   ++  A+    EM      PD VTY  LI+ +C  G LE A +L++ M   G
Sbjct: 265 LLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGG 321

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P    Y S++  LC KG    A  V+++M+Q  +  D A Y T+L   C K ++  A 
Sbjct: 322 VEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSAR 381

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F EM R+G+A D V+++T+I    R  +L+ A    +EM +  L  D V YT++I+GY
Sbjct: 382 RWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGY 441

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA +M + M+++G   +VVTY  + +GLC+   +  A++L +EM  +G+  + 
Sbjct: 442 CKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNA 501

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI+G CK G + +A+     M    +KPD+ TY TLID  CK G++++A+ L  +
Sbjct: 502 CTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQE 561

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + I P  ++Y +L+NG+C  G V    +L   M+ K I P   + N+++K YC   +
Sbjct: 562 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENN 621

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    M S  V P+  +YN LI G  +  NM +A     +M  +G      +Y+ 
Sbjct: 622 MKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSA 681

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++ +  ++  +   M ++GL  +   Y   I+ + +++NL+      DE+++  
Sbjct: 682 LIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEAS 741

Query: 481 FV 482
            V
Sbjct: 742 IV 743



 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 155/482 (32%), Positives = 253/482 (52%), Gaps = 7/482 (1%)

Query: 3   NALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK 62
           NA+     +D A     E+  K V     +YN L+ A C  G +++A QL + M+     
Sbjct: 236 NAVLSRLPLDEAIELFQELPHKNV----CSYNILLKALCDAGRVKDARQLFDEMASA--- 288

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P V TY  LI+G C  G  + A ++LDEM+  G+ P+   Y +++   C K  +S+A  +
Sbjct: 289 PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRV 348

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             +M +R V  D   ++T++  F   G L  A  +F EM+  GL  D V YT +ING CR
Sbjct: 349 VEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCR 408

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
              + EA K+  EM  +   +D VTY  +++G C+   + EA  + N M++RGV P+  T
Sbjct: 409 AVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVT 468

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +T L  G CK G++  A  L   M+ K ++ +  TYN+LI+G CK G +E+A +  ADM 
Sbjct: 469 YTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMD 528

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           +  + P+  +Y  LI+  C  G +  A  L  EM+ KGIKPT+V+ N ++ G+C SG   
Sbjct: 529 TACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 588

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
              + L  M+ + + P++ +YN+L+  +  E NM     +   M ++ + P+  TYN+++
Sbjct: 589 GGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILI 648

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G C+   M ++      MI+KG     ++Y+ LI     +    EA     +M + G  
Sbjct: 649 KGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLT 708

Query: 483 PD 484
            +
Sbjct: 709 AE 710


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 151/465 (32%), Positives = 258/465 (55%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+  +T T N LIN++C    L  AF ++  +   G +P   T+ +LI GLC +G
Sbjct: 79  QMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEG 138

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A ++ D+M   G  PD  TY TL+   C+  N S A      M +R   P +V +S
Sbjct: 139 KIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYS 198

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++ QL  AL  F +M + G+ P+N  Y+ +I+G C  G   EA+++   M+ +
Sbjct: 199 TIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 258

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + D +T+NT+++ LC+  M+ +A  + + M++  + PD  T+ +L+ GHC    M K 
Sbjct: 259 KIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKT 318

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           +N+FD M +K   P +++Y TLI+G+CK+  M+KA  L+ +M  + + P+ ++Y  LI+G
Sbjct: 319 VNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG 378

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + +A  L++EMV  G  P LV+   +    C++   ++A   L  +    +DPD
Sbjct: 379 LCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPD 438

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              Y+ +++G  R   ++ A  L SK+ ++GL PDV TY +++ G C+QG + ++  +  
Sbjct: 439 IHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFG 498

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M E G +P+  TY  +  G +  N    A +   EML RGF  D
Sbjct: 499 EMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSID 543



 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 158/474 (33%), Positives = 247/474 (52%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID A      M +    P  V ++ L+ +  R         L   M   G+    +T N 
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LIN  C   R   A  VL ++L++G  P TAT+ TL+   C +  + EA ++F +M+  G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             PD++++ TLI    + G    A+ + R M+     P  V+Y+ II+  C++  + EAL
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  +ML KG   +  TY+++++GLC      EA  LF  M+ R + PD  TF TL+   
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+G + KA  + D+M Q  +KPD+VTYN+L+DG C   EM K   ++  M+ +   P+ 
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ISY  LINGYC +  + +A  L+ EM  +G+ P  V+ NT+I G C  G    A     +
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV  G  PD ++Y  L +   +   + +A  L+  +E   L PD+  Y++++ G CR G 
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 454

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  +  +  ++  KGL+PD  TYT +ING   Q  L EA +   EM + G  P+
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPN 508



 Score =  288 bits (737), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 151/471 (32%), Positives = 259/471 (54%), Gaps = 1/471 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C  +++  A   L ++ + G  P T T+ TLI   C EG + EA QL + M+G+G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G    A   L  M Q    P    Y+T++   C+   ++EA 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G++P+  ++S+LI      G    A+  F  M    ++PD + +  +++  
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V++A  + D M++     DVVTYN++++G C    + +  ++F+ M+ +G  P  
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++TTLI+G+CK   M+KA+ LF+ M+Q+ + PD VTYNTLI G C VG +  A  L+ +
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     P+ ++Y IL +  C    + EA  L   + G  + P +   + ++ G CR+G+
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 454

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  SK+ S+G+ PD  +Y  +ING  ++  + +A  L  +M+  G  P+  TYN+
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNL 514

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           I  GF R      +  +   M+ +G + D ST TTL+   +S + L ++ +
Sbjct: 515 ITRGFLRNNETLRAIQLFQEMLSRGFSIDVST-TTLLVEMLSDDGLDQSVK 564



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 229/443 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC + KI  A     +M  +G  PD +TY TLIN  C+ G    A + + SM  + 
Sbjct: 130 LIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN 189

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  Y+++I+ LCK  +   A  +  +ML  G+SP+  TY++L+   C   +  EA 
Sbjct: 190 CRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAI 249

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M  R + PD ++F+TL+    + G + +A      M  + L PD V Y  +++G+
Sbjct: 250 RLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGH 309

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + + + + D M+ KGCV  V++Y T++NG C+ +++ +A  LF EM ++G+ PD 
Sbjct: 310 CLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDT 369

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIHG C  G +  A+ LF  M      PD+VTY  L D  CK   + +A  L   
Sbjct: 370 VTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKV 429

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+   Y I+++G C  G +  A  L+ ++  KG+ P + +   +I G C+ G 
Sbjct: 430 IEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 489

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +   +M   G  P++ +YN +  GF+R     +A  L  +M ++G   DV T  +
Sbjct: 490 LAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTL 549

Query: 421 ILTGFCRQGRMHDSELILWRMIE 443
           ++      G     + IL   ++
Sbjct: 550 LVEMLSDDGLDQSVKQILCEFVQ 572



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 200/379 (52%), Gaps = 6/379 (1%)

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
           +S     + +A  +F  M R    P IV FS L+   +R       L  +++M S G+  
Sbjct: 28  KSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPH 87

Query: 169 DNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           +     I+IN +C   R GF    L    ++L+ G      T+ T++ GLC    + EA 
Sbjct: 88  NTYTLNILINSFCHLNRLGFAFSVL---GDILKLGYQPSTATFTTLIRGLCVEGKIGEAL 144

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            LF++M   G  PD  T+ TLI+G CK GN + A+     M Q++ +P +V Y+T+ID  
Sbjct: 145 QLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSL 204

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK  ++ +A  L++DM+++ ISPN  +Y  LI+G C +GH  EA RL+Y M+ + I P  
Sbjct: 205 CKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQ 264

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++ NT++   C+ G   KA   +  M+   + PD ++YN+L++G      M K   +   
Sbjct: 265 LTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDT 324

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  +G VP VI+Y  ++ G+C+   M  +  +   M ++GL PD  TY TLI+G      
Sbjct: 325 MVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGR 384

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           L++A     EM+  G +PD
Sbjct: 385 LRDAIALFHEMVVYGQIPD 403



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 87/198 (43%)

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
           V  ++ A  L+  M+  +  P+ + +  L+     M H +    L+ +M   GI     +
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            N +I  +C       A   L  ++  G  P + ++ TLI G   E  + +A  L  KM 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G  PDV+TY  ++ G C+ G    +   L  M ++   P    Y+T+I+       L 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 468 EAFRFHDEMLQRGFVPDD 485
           EA     +ML +G  P++
Sbjct: 212 EALSLFSDMLAKGISPNN 229


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 261/465 (56%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  GV P+  T N LIN++C    +  AF ++  +   G +P   T+ +LI GLC +G
Sbjct: 81  QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEG 140

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+M+  G  P+  TY TL+   C+  N S A  +   M +    PD+V ++
Sbjct: 141 KIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYT 200

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           ++I    ++ Q+  A   F +M   G+ PD   YT +++  C          + ++M+  
Sbjct: 201 SIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 260

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + DVV ++T+++ LC+   +TEA ++ + M++RGV PD  T+TTL+ GHC    M++A
Sbjct: 261 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 320

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD+M +K   PD+++Y TLI+G+CK+ +++KA  L+ +M  ++  P+  +Y  L++G
Sbjct: 321 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHG 380

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + +A  L++EMV +G  P LV+ + ++   C++    +A   L  + +  ++PD
Sbjct: 381 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPD 440

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              YN +I+G  R   ++ A  L S + ++GL P V TYN+++ G C++G ++++  +  
Sbjct: 441 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFM 500

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M     +PD  TY T+  G +  N    A +  +EML RGF  D
Sbjct: 501 EMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 545



 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 148/457 (32%), Positives = 253/457 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C  +++  A   L ++ + G  PD  T+ TLI   C EG + EA  L + M  +G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G    A  +L  M Q    PD   Y +++   C+   ++EA 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G++PDI ++++L+       +         +M ++ ++PD V+++ +++  
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA ++ D M+++G   DVVTY T+++G C    + EA  +F+ M+ +G  PD 
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++TTLI+G+CK   ++KA+ LF+ M +K   PD  TYNTL+ G C VG ++ A  L+ +
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++R   P+ ++Y IL++  C   H+ EA  L   +    + P +   N II G CR+G+
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ P   +YN +I+G  +   +++A  L  +M+     PD  TYN 
Sbjct: 457 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNT 516

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           I  GF +      +  +L  M+ +G + D ST T L+
Sbjct: 517 IARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLV 553



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 238/457 (52%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  L+ +  +         L   M   G+ P V+T N LIN  C   R   A  V
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  PD  T+ TL+   C +  + EA  +F +M   G  P++V++ TLI    +
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+   R M+     PD V+YT II+  C++  V EA  +  +M+ +G   D+ T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y ++++ LC          L N+M+   + PD   F+T++   CK+G + +A  + D+M 
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q+ ++PD+VTY TL+DG C   EM++A K++  M+ +  +P+ ISY  LINGYC +  + 
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EM  K   P   + NT++ G C  G    A     +MV+ G  PD ++Y+ L+
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 413

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +  ++++A AL+  +E   L PD+  YN+I+ G CR G +  +  +   +  KGL+
Sbjct: 414 DSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 473

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P   TY  +I+G   +  L EA +   EM      PD
Sbjct: 474 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPD 510



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 202/394 (51%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML   L   +++ N    +S     + +A   F  +      P IV F+ L+   ++   
Sbjct: 12  MLSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKH 71

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
               L    +M S G+ P+     I+IN +C    V  A  +  ++L+ G   D  T+ T
Sbjct: 72  YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 131

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++ GLC    + EA  LF++M++ G  P+  T+ TLI+G CK GN + A+ L   M Q +
Sbjct: 132 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 191

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            +PD+V Y ++ID  CK  ++ +A  L++ M+ + ISP+  +Y  L++  C++       
Sbjct: 192 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 251

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L  +MV   I P +V  +T++   C+ G  ++A E +  M+  GV+PD ++Y TL++G 
Sbjct: 252 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 311

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
             +  MD+A  +   M  +G  PDVI+Y  ++ G+C+  ++  +  +   M  K   PD 
Sbjct: 312 CLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 371

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TY TL++G      L++A     EM+ RG +PD
Sbjct: 372 KTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPD 405


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  295 bits (754), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 153/457 (33%), Positives = 247/457 (54%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P TV +N L+ +  +       F L N M   G+ P V+T N LIN  C   R   A  V
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++GL PDTAT+ TL+   C +  + +A  +F +M   G  P++V++ TLI    +
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G  + A+   R M+     PD V+YT II+  C++  V EA  +  +M+ +G   D+ T
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y ++++ LC          L N+M+   + PD   F+T++   CK+G + +A ++ D+M 
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            + ++P++VTYN L+DG C   EM++A K++  M+    +PN ISY  LINGYC +  + 
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EM  K + P  V+ NT++ G C  G    A     +MV+ G  PD  +Y  L+
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   ++ ++D+A AL+  +E   + PD+  Y +++ G CR G +  +  I   +  KGL 
Sbjct: 425 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 484

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TYT +ING   +  L EA +   EM   G  PD
Sbjct: 485 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPD 521



 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 252/468 (53%), Gaps = 6/468 (1%)

Query: 20  EMEQKGVYPDTVTYNTLINAYC---REGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           +M+  G+ PD  T N LIN++C   R GF   AF ++  +   GL+P   T+ +LI GLC
Sbjct: 92  QMDSFGIPPDVYTLNILINSFCHLNRPGF---AFSVLAKILKLGLQPDTATFTTLIRGLC 148

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
            +G+   A  + D+M+  G  P+  TY TL+   C+  N + A  +   M +    PD+V
Sbjct: 149 VEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVV 208

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
            ++++I    ++ Q+  A   F +M   G+ PD   YT +I+  C          + ++M
Sbjct: 209 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 268

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           +    + DVV ++T+++ LC+   +TEA D+ + M+ RGV P+  T+  L+ GHC    M
Sbjct: 269 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 328

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A+ +FD M      P++++YNTLI+G+CK+  M+KA  L+ +M  +++ PN ++Y  L
Sbjct: 329 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 388

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ++G C +G + +A  L++EMV  G  P L +   ++   C+     +A   L  +    +
Sbjct: 389 MHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
           DPD   Y  +I+G  R   ++ A  + S + ++GL P+V TY +++ G CR+G + ++  
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 508

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   M   G +PD  TY T+  G +       A +   EML RGF  D
Sbjct: 509 LFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSAD 556



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 148/457 (32%), Positives = 251/457 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C  ++   A   L ++ + G+ PDT T+ TLI   C EG + +A  L + M G+G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G  + A  +L  M Q    PD   Y +++   C+   ++EA 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G++PDI ++++LI       +         +M ++ ++PD V+++ +++  
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + D M+ +G   +VVTYN +++G C    + EA  +F+ M+  G  P+ 
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI+G+CK   M+KA  LF+ M QK + P+ VTYNTL+ G C VG ++ A  L+ +
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    P+  +Y IL++  C   H+ EA  L   + G  + P +     +I G CR+G+
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ P+  +Y  +ING  R   +D+A  L  +M+  G  PD  TYN 
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           I  G  +      +  +L  M+ +G + D ST T L+
Sbjct: 528 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 209/411 (50%), Gaps = 39/411 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK    ++A   L  MEQ    PD V Y ++I++ C++  + EAF L + M G+G
Sbjct: 178 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG 237

Query: 61  LKPGVFTYNSLI-----------------------------------NGLCKKGRCDRAK 85
           + P +FTY SLI                                   + LCK+G+   A 
Sbjct: 238 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 297

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +V+D M+  G+ P+  TYN L+   C +  M EA ++F  M   G AP+++S++TLI  +
Sbjct: 298 DVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGY 357

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  ++D+A   F EM    L+P+ V Y  +++G C  G + +A+ +  EM+  G + D+
Sbjct: 358 CKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDL 417

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TY  +L+ LC+   L EA  L   +    + PD   +T +I G C+ G +  A ++F  
Sbjct: 418 ATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN 477

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           ++ K ++P++ TY  +I+G C+ G +++ANKL+ +M     SP+  +Y  +  G      
Sbjct: 478 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 537

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
              A +L  EM+ +G    + +   +++  C      K D+ + +++SE V
Sbjct: 538 ALRAIQLLQEMLARGFSADVSTTTLLVEMLCD----DKLDQSVKQILSEFV 584



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 117/233 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++D A     EM QK + P+TVTYNTL++  C  G L++A  L + M   G
Sbjct: 353 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHG 412

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY  L++ LCKK   D A  +L  +    + PD   Y  ++   CR   +  A 
Sbjct: 413 QIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 472

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  +S +G+ P++ +++ +I    R G LD A   F EM   G  PD   Y  I  G 
Sbjct: 473 DIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGL 532

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            +N   L A+++  EML +G   DV T   ++  LC  K+      + +E ++
Sbjct: 533 LQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  295 bits (754), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 159/488 (32%), Positives = 266/488 (54%), Gaps = 1/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  K D  K F  +M   G  P   TYN +I+   +EG +E A  L   M  +G
Sbjct: 104 LLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRG 163

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TYNS+I+G  K GR D      +EM  M   PD  TYN+L+   C+   + +  
Sbjct: 164 LIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGL 223

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E + EM + G+ P++VS+STL+  F +   + +A+ ++ +M+  G VP+   YT +++  
Sbjct: 224 EFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDAN 283

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A ++ +EMLE G   +VVTY  +++GLC A+ + EA+ LF +M+  GV P+ 
Sbjct: 284 CKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNL 343

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LIHG  K  NM++AL L + +  + I+PD++ Y T I G C + ++E A  +  +
Sbjct: 344 ASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNE 403

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I  N + Y  L++ Y   G+ TE   L  EM     + T+V+   +I G C++  
Sbjct: 404 MQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKL 463

Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            SKA ++  +M ++ G+ P++  Y  +I+G  +E  +  A  L  +M  +GLVPD   Y 
Sbjct: 464 VSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYT 523

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G  +QG M ++  +  +M E G+  D   YT+L+ G    N L++A  F +EM+  
Sbjct: 524 SLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGE 583

Query: 480 GFVPDDAF 487
             +PD+  
Sbjct: 584 EILPDEVL 591



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 242/458 (52%), Gaps = 1/458 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++ L +     G LEEA Q  + M    + P   + N L++   K G+ D  K  
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M+  G  P   TYN ++    ++ ++  A  +F EM  RG+ PD V+++++I  + +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+LD  + +F EMKS    PD + Y  +IN +C++G + + L+   EM + G   +VV+
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T+++  C+  M+ +A   + +M   G  P+ +T+T+L+  +CK GN++ A  L + M 
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  ++ ++VTY  LIDG C    M++A KL+  M++  + PN  SY  LI+G+    ++ 
Sbjct: 301 EVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMD 360

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  L  E+ G+GI+P L+   T I G C       A   +++M   G+  +++ Y TL+
Sbjct: 361 RALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLM 420

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-GL 446
           + + +  N  +   L+ +M+       V+T+ V++ G C+   +  +     RM    GL
Sbjct: 421 DAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGL 480

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+ + YT +I+G   +N +K A    ++M Q G VPD
Sbjct: 481 QPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPD 518



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 202/410 (49%), Gaps = 37/410 (9%)

Query: 104 NTLLVESCRKENMSEAEEIFCEM--SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           N++L E    +   E  ++F E+  +R    P    F  L  +    G L+ A   F +M
Sbjct: 30  NSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKM 89

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
           K   + P       +++ + + G      +   +M+  G    V TYN +++ + +   +
Sbjct: 90  KRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDI 149

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
             A  LF EM  RG+ PD  T+ ++I G+ K G ++  +  F+ M   S +PD++TYN+L
Sbjct: 150 EAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSL 209

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS----------------MGH 325
           I+ FCK G++ K  + + +M    + PN +SY  L++ +C                 +GH
Sbjct: 210 INCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGH 269

Query: 326 V-------------------TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           V                   ++AFRL  EM+  G++  +V+   +I G C +    +A++
Sbjct: 270 VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEK 329

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              KMV+ GV P+  SYN LI+GFV+ +NMD+A  L+++++ +G+ PD++ Y   + G C
Sbjct: 330 LFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLC 389

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
              ++  +++++  M E G+  +   YTTL++ +    N  E     +EM
Sbjct: 390 GLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEM 439



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 189/369 (51%), Gaps = 38/369 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+A CK+  +  A  F  +M + G  P+  TY +L++A C+ G L +AF+L N M   G
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V TY +LI+GLC   R   A+++  +M+  G+ P+ A+YN L+    + +NM  A 
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  E+  RG+ PD++ + T I       +++ A +   EM+  G+  + ++YT +++ Y
Sbjct: 364 ELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAY 423

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVT--------------------------------- 207
            ++G   E L + +EM E    + VVT                                 
Sbjct: 424 FKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPN 483

Query: 208 ---YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
              Y  +++GLC+   +  A  LF +M + G+ PD   +T+L+ G+ K GNM +AL L D
Sbjct: 484 AAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRD 543

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI-SYGILINGYCSM 323
            M +  +K D++ Y +L+ GF +  +++KA     +MI  +I P+ +   G+L   Y  +
Sbjct: 544 KMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHY-EL 602

Query: 324 GHVTEAFRL 332
           G + EA  L
Sbjct: 603 GCIDEAVGL 611



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 145/286 (50%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV     ++ + + L    ML EA   F++M    VFP   +   L+H   K G  +   
Sbjct: 59  CVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 118

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             F  M     KP + TYN +ID   K G++E A  L+ +M  R + P+ ++Y  +I+GY
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGY 178

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G + +    + EM     +P +++ N++I  +C+SG   K  EF  +M   G+ P+ 
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNV 238

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           +SY+TL++ F +E+ M +A      M   G VP+  TY  ++   C+ G + D+  +   
Sbjct: 239 VSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANE 298

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           M+E G+  +  TYT LI+G      +KEA +   +M+  G +P+ A
Sbjct: 299 MLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLA 344



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 119/227 (52%), Gaps = 2/227 (0%)

Query: 261 NLFDIM--TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           ++FD +  T+    P    ++ L      +G +E+A + ++ M   ++ P   S   L++
Sbjct: 47  DVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLH 106

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            +  +G      R + +M+G G KPT+ + N +I    + GD   A     +M   G+ P
Sbjct: 107 KFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIP 166

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D+++YN++I+G+ +   +D       +M++    PDVITYN ++  FC+ G++       
Sbjct: 167 DTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFY 226

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M + GL P+  +Y+TL++    ++ +++A +F+ +M + G VP++
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNE 273



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 36/231 (15%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS------ 57
            LC   KI++AK+ + EM++ G+  +T+ Y TL++AY + G   E   L+  M       
Sbjct: 387 GLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEV 446

Query: 58  -------------------------GK-----GLKPGVFTYNSLINGLCKKGRCDRAKEV 87
                                    G+     GL+P    Y ++I+GLCK+ +   A  +
Sbjct: 447 TVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTL 506

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            ++M Q GL PD   Y +L+  + ++ NM EA  +  +M+  G+  D++++++L+  FS+
Sbjct: 507 FEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQ 566

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
             QL +A  +  EM    ++PD VL   ++  +   G + EA+ ++  +++
Sbjct: 567 CNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMK 617



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 87/228 (38%), Gaps = 60/228 (26%)

Query: 317 INGYCSMGHVTEAFRLWYEM--VGKGI---KPTLVSCNTI-----IKGYCRSG----DA- 361
           I  YC + H+    R++Y+   + + I   K  L  C+        +  C  G    DA 
Sbjct: 10  IESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDAL 69

Query: 362 ----------SKADEFLSKMVSEGVDPDSISYNTLINGFV-------------------- 391
                      +A +  SKM    V P + S N L++ F                     
Sbjct: 70  FSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGS 129

Query: 392 ---------------REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
                          +E +++ A  L  +M+ +GL+PD +TYN ++ G+ + GR+ D+  
Sbjct: 130 KPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVY 189

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
               M      PD  TY +LIN       L +   F+ EM Q G  P+
Sbjct: 190 FFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  295 bits (754), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 148/475 (31%), Positives = 265/475 (55%), Gaps = 1/475 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K + A++   EM +KG+  + +TY+ LI+++CR G ++ A   ++ M+   ++  V+ YN
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           SLING CK G    AK   DEM+  GL+P   TY +L+   C +    +A +++ EM+ +
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G++P+  +F+ +I    R   +  A+  F EMK   ++P  V Y ++I G+CR+G + EA
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             + DEM+ KG V D  TY  +++GLC    ++EA +  +++ +     +   ++ L+HG
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           +CK+G    A++   +M ++ +  D+V Y  LIDG  +  +      L  +M +  + P+
Sbjct: 447 YCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPD 506

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            + Y  +I+ +   G++ EAF LW  MV +G  P +V+   +I G C++G   KA+    
Sbjct: 507 AVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSK 566

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           + +   V P+ I+Y   ++   R  NM+KA  L   M  +G +   ++YN+++ GFCR G
Sbjct: 567 ETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLG 625

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++ ++  +L  M +  + PD  TY+T+I     ++NL+EA +    ML +G  PD
Sbjct: 626 KIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPD 680



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 145/452 (32%), Positives = 242/452 (53%), Gaps = 1/452 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK     +AK +  EM  KG+ P  VTY +LI+ YC EG   +AF++ N M+ KG
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T+ ++I+GLC+      A  +  EM +  + P   TYN ++   CR  N+SEA 
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAF 387

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G  PD  ++  LI      G++  A  +  ++       +N+ Y+ +++GY
Sbjct: 388 HLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGY 447

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   +A+     M+E+G  MD+V Y  +++G  R         L  EM   G+ PD 
Sbjct: 448 CKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDA 507

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I  H K GN+ +A  L+DIM  +   P++VTY  LI+G CK G M+KA  L  +
Sbjct: 508 VIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKE 567

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            +   ++PN+I+YG  ++     G++ +A +L + M+ KG   T VS N +I+G+CR G 
Sbjct: 568 TLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGK 626

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + L  M    + PD I+Y+T+I    +  N+ +A  L   M ++GL PD + Y+ 
Sbjct: 627 IEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSF 686

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           ++ G C  G +  +  +   MI +G+  +  T
Sbjct: 687 LVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 152/482 (31%), Positives = 243/482 (50%), Gaps = 10/482 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V +LC+    + AK  +  ME        V YN LI+  C+   + EA ++ N +  KG
Sbjct: 137 VVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKG 196

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  V TY          G+ + A+ +  EM + GL  +  TY+ L+   CR+  M  A 
Sbjct: 197 LEANVVTY---------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAI 247

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +M++  +   +  +++LI  + + G    A  YF EM   GL P  V YT +I+GY
Sbjct: 248 GFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGY 307

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A K+ +EM  KG   +  T+  I++GLCRA M+ EA  LF EM ER + P  
Sbjct: 308 CNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSE 367

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I GHC+ GN+++A +L D M  K   PD  TY  LI G C VG + +A +   D
Sbjct: 368 VTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDD 427

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +       N + Y  L++GYC  G   +A      MV +G+   LV    +I G  R  D
Sbjct: 428 LHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHD 487

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                  L +M + G+ PD++ Y  +I+   +  N+ +AF L   M ++G +P+V+TY  
Sbjct: 488 TRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTA 547

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G M  +EL+    +   + P+  TY   ++      N+++A + H  ML +G
Sbjct: 548 LINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KG 606

Query: 481 FV 482
           F+
Sbjct: 607 FL 608



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 248/467 (53%), Gaps = 15/467 (3%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M+   + P+  T + L+N   R     +   L + +    ++P ++ Y++++  LC+   
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            ++AKE++  M           YN L+   C+   + EA EI   + ++G+  ++V++  
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY- 205

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
                   G+ + A + F+EM   GL  +++ Y+I+I+ +CR G +  A+   D+M +  
Sbjct: 206 --------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
               V  YN+++NG C+    + A   F+EM+++G+ P   T+T+LI G+C +G  +KA 
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            +++ MT K I P+  T+  +I G C+   M +A +L+ +M  RKI P+ ++Y ++I G+
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGH 377

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G+++EAF L  EMVGKG  P   +   +I G C  G  S+A EF+  +  +    ++
Sbjct: 378 CRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNN 437

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL---I 437
           + Y+ L++G+ +E     A +    M  +G+  D++ Y +++ G  R+   HD+     +
Sbjct: 438 MCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTARE---HDTRALFGL 494

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L  M   GL PD   YT +I+ H    NLKEAF   D M+  G +P+
Sbjct: 495 LKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPN 541



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 244/485 (50%), Gaps = 11/485 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  + +   +   ++    V PD   Y+ ++ + C      +A ++++ M    
Sbjct: 102 LLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQ 161

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  +  YN LI+GLCK  R   A E+ + ++Q GL  +  TY             +EAE
Sbjct: 162 CKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG---------KFNEAE 212

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+  + +++S LI  F R G++D A+ +  +M  A +      Y  +INGY
Sbjct: 213 LLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGY 272

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A    DEM++KG    VVTY ++++G C      +A  ++NEM  +G+ P+ 
Sbjct: 273 CKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNT 332

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTFT +I G C+   M +A+ LF  M ++ I P  VTYN +I+G C+ G + +A  L  +
Sbjct: 333 YTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDE 392

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   P+  +Y  LI+G CS+G V+EA     ++     K   +  + ++ GYC+ G 
Sbjct: 393 MVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGR 452

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      MV  GV  D + Y  LI+G  RE +    F L+ +M N GL PD + Y  
Sbjct: 453 FKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTN 512

Query: 421 ILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++    + G + ++   LW  M+++G  P+  TYT LING      + +A     E L  
Sbjct: 513 MIDRHSKAGNLKEA-FGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVS 571

Query: 480 GFVPD 484
              P+
Sbjct: 572 DVTPN 576



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 192/408 (47%), Gaps = 69/408 (16%)

Query: 146 SRN---GQLDRALMYF-----REMKSAGLVPDNVLYTIIING------------------ 179
           SRN     +D+ LM       R MK   L+P+    + ++NG                  
Sbjct: 64  SRNLKPSHVDKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIV 123

Query: 180 --------YCRNGFVLEALKMRD-----EMLE----KGCVMDVVTYNTILNGLCRAKML- 221
                   Y  +  V    +++D     EM+       C + +V YN +++GLC+++ + 
Sbjct: 124 SANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIW 183

Query: 222 -------------------------TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
                                     EA+ LF EM E+G+  +  T++ LI   C+ G M
Sbjct: 184 EALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEM 243

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A+   D MT+ SI+  +  YN+LI+G+CK+G    A   + +MI + ++P  ++Y  L
Sbjct: 244 DNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSL 303

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+GYC+ G   +AF+++ EM  KGI P   +   II G CR+   ++A     +M    +
Sbjct: 304 ISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKI 363

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P  ++YN +I G  R  N+ +AF L+ +M  +G VPD  TY  +++G C  GR+ +++ 
Sbjct: 364 MPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKE 423

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  + +     +   Y+ L++G+  +   K+A      M++RG   D
Sbjct: 424 FVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMD 471



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 152/303 (50%), Gaps = 11/303 (3%)

Query: 186 VLEALKMRDEMLEKGCVM--DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           VL  L + D  L K C +  +V T + +LNGL R +   +   LF++++   V PD Y +
Sbjct: 75  VLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIY 134

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           + ++   C+  + NKA  +   M     K  IV YN LI G CK   + +A ++   ++ 
Sbjct: 135 SAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQ 194

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           + +  N ++Y          G   EA  L+ EM  KG+    ++ + +I  +CR G+   
Sbjct: 195 KGLEANVVTY---------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDN 245

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A  FL KM    ++     YN+LING+ +  N   A     +M ++GL P V+TY  +++
Sbjct: 246 AIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLIS 305

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+C +G  H +  +   M  KG++P+  T+T +I+G    N + EA R   EM +R  +P
Sbjct: 306 GYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMP 365

Query: 484 DDA 486
            + 
Sbjct: 366 SEV 368



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 26/277 (9%)

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           R  F D +    L   H     M  +LN   +M   ++ P++ T + L++G  +      
Sbjct: 55  RIAFNDPFISRNLKPSHVDKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFND 114

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
              L+ D++S  + P+   Y  ++   C +    +A  + + M     K ++V  N +I 
Sbjct: 115 VLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIH 174

Query: 354 GYCRS--------------------------GDASKADEFLSKMVSEGVDPDSISYNTLI 387
           G C+S                          G  ++A+    +M  +G+  + I+Y+ LI
Sbjct: 175 GLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILI 234

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           + F R   MD A   + KM    +   V  YN ++ G+C+ G    ++     MI+KGL 
Sbjct: 235 DSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLT 294

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P   TYT+LI+G+ ++    +AF+ ++EM  +G  P+
Sbjct: 295 PTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPN 331



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 34/65 (52%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK   +  A      M  KG+ PDT+ Y+ L++  C  G LE+AF+L + M  +G++   
Sbjct: 657 CKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNH 716

Query: 66  FTYNS 70
            T  S
Sbjct: 717 VTPKS 721


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  295 bits (754), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 157/503 (31%), Positives = 271/503 (53%), Gaps = 22/503 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCRE----------------G 44
           ++   C  HK+  +     ++ + G  PD VT+NTL++  C E                G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 45  FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
           FLE A  L + M   GL P V T+N+LINGLC +GR   A  ++++M+  GL  D  TY 
Sbjct: 207 FLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           T++   C+  +   A  +  +M    + PD+V +S +I    ++G    A   F EM   
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G+ P+   Y  +I+G+C  G   +A ++  +M+E+    DV+T+N +++   +   L EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
           + L +EML R +FPD  T+ ++I+G CK    + A ++FD+M      PD+VT+NT+ID 
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           +C+   +++  +L  ++  R +  N  +Y  LI+G+C + ++  A  L+ EM+  G+ P 
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
            ++CN ++ G+C +    +A E    +    +D D+++YN +I+G  +   +D+A+ L  
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            +   G+ PDV TYNV+++GFC +  + D+ ++  +M + G  PD STY TLI G +   
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621

Query: 465 NLKEAFRFHDEMLQRGFVPDDAF 487
            + ++     EM   GF   DAF
Sbjct: 622 EIDKSIELISEMRSNGF-SGDAF 643



 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/483 (32%), Positives = 256/483 (53%), Gaps = 13/483 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + ++  A   + +M  KG++ D VTY T++N  C+ G  + A  L++ M    
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V  Y+++I+ LCK G    A+ +  EML+ G++P+  TYN ++   C     S+A+
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + PD+++F+ LI    + G+L  A     EM    + PD V Y  +I G+
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++    +A  M D M       DVVT+NTI++  CRAK + E   L  E+  RG+  + 
Sbjct: 412 CKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIHG C+  N+N A +LF  M    + PD +T N L+ GFC+  ++E+A +L+  
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   KI  + ++Y I+I+G C    V EA+ L+  +   G++P + + N +I G+C    
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A+    KM   G +PD+ +YNTLI G ++   +DK+  L+S+M + G   D  T  +
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
                C   R+ D E+     IE  L P  +  T+ I  +V +   +E +     +L R 
Sbjct: 648 AEEIIC---RVSDEEI-----IENYLRPKINGETSSIPRYVVE-LAEELYTVEPWLLPRQ 698

Query: 481 FVP 483
             P
Sbjct: 699 TAP 701



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 260/501 (51%), Gaps = 19/501 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++    + ++ D A     +ME + +  +  ++N LI  +C    L  +      ++  G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 61  LKPGVFTYNSLINGLCKKGRCDRA---------------KEVLDEMLQMGLSPDTATYNT 105
            +P V T+N+L++GLC + R   A                 + D+M+++GL+P   T+NT
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   C +  + EA  +  +M  +G+  D+V++ T++    + G    AL    +M+   
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           + PD V+Y+ II+  C++G   +A  +  EMLEKG   +V TYN +++G C     ++A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            L  +M+ER + PD  TF  LI    K+G + +A  L D M  + I PD VTYN++I GF
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK    + A  ++ D+++   SP+ +++  +I+ YC    V E  +L  E+  +G+    
Sbjct: 412 CKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            + NT+I G+C   + + A +   +M+S GV PD+I+ N L+ GF   E +++A  L   
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ++   +  D + YN+I+ G C+  ++ ++  +   +   G+ PD  TY  +I+G   ++ 
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 466 LKEAFRFHDEMLQRGFVPDDA 486
           + +A     +M   G  PD++
Sbjct: 588 ISDANVLFHKMKDNGHEPDNS 608



 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 231/433 (53%), Gaps = 4/433 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M + G+ P  +T+NTLIN  C EG + EA  L+N M GKGL   V TY +++NG+CK G
Sbjct: 216 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
               A  +L +M +  + PD   Y+ ++   C+  + S+A+ +F EM  +G+AP++ +++
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            +I  F   G+   A    R+M    + PD + +  +I+   + G + EA K+ DEML +
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               D VTYN+++ G C+     +A  +F+ M      PD  TF T+I  +C+   +++ 
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEG 451

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + L   ++++ +  +  TYNTLI GFC+V  +  A  L+ +MIS  + P+ I+  IL+ G
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C    + EA  L+  +    I    V+ N II G C+     +A +    +   GV+PD
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN +I+GF  +  +  A  L  KM++ G  PD  TYN ++ G  + G +  S  ++ 
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631

Query: 440 RMIEKGLNPDRST 452
            M   G + D  T
Sbjct: 632 EMRSNGFSGDAFT 644



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 230/464 (49%), Gaps = 24/464 (5%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A  F   M +   +   V  N +I  + R    + A  L   M  + +   ++++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI   C   +   +     ++ ++G  PD  T+NTLL   C ++ +SEA  +F  M   G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
                                  A+  F +M   GL P  + +  +ING C  G VLEA 
Sbjct: 207 FL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            + ++M+ KG  +DVVTY TI+NG+C+      A +L ++M E  + PD   ++ +I   
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CKDG+ + A  LF  M +K I P++ TYN +IDGFC  G    A +L  DMI R+I+P+ 
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +++  LI+     G + EA +L  EM+ + I P  V+ N++I G+C+      A      
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M S    PD +++NT+I+ + R + +D+   L+ ++  +GLV +  TYN ++ GFC    
Sbjct: 427 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           ++ ++ +   MI  G+ PD  T   L+ G      L+EA    +
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 217/416 (52%), Gaps = 24/416 (5%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N +I    +  R D A  +  +M    +  +  ++N L+   C    +S +   F ++++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G  PD+V+F+TL+       ++  AL  F  M   G                     LE
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF--------------------LE 209

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A+ + D+M+E G    V+T+NT++NGLC    + EA  L N+M+ +G+  D  T+ T+++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G CK G+   ALNL   M +  IKPD+V Y+ +ID  CK G    A  L+++M+ + I+P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N  +Y  +I+G+CS G  ++A RL  +M+ + I P +++ N +I    + G   +A++  
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M+   + PD+++YN++I GF +    D A  +   M +    PDV+T+N I+  +CR 
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRA 445

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            R+ +   +L  +  +GL  + +TY TLI+G    +NL  A     EM+  G  PD
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  295 bits (754), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 155/475 (32%), Positives = 249/475 (52%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A      M  K   P TV +N L+ +  +         L   M   G+ P V+T   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +IN LC   R D A   L ++L++G  PD  T+ TL+   C +  + EA  +F +M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P++V++ TLI    + G    A+   R M+     P+ V+++ +I+  C++  V EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM+ KG   ++VTYN++++GLC+         L NEM++  + PD +T  T++   
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+G + +A ++ D+M  + ++P++VTYN L+DG C   E++ A K++  M+ +    N 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ISY  LINGYC +  V +A  L+ EM  + + P  V+ NT+I G C  G    A     +
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV+ G  PD ++Y TL +   +  ++DKA AL+  +E     PD+  Y  IL G CR G 
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           + D+  +   +  KGL P+  TY  +I+G   Q  L EA +   EM + G  P+D
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525



 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 149/465 (32%), Positives = 254/465 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ PD  T   +IN+ C    ++ AF  +  +   G +P   T+ +LI GLC +G
Sbjct: 95  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+M+  G  P+  TY TL+   C+  N S A  +   M +    P++V FS
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TLI    ++ Q+  A   F EM + G+ P+ V Y  +I+G C+         + +EM++ 
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + DV T NT+++ LC+  M+ EA D+ + M+ RGV P+  T+  L+ GHC    ++ A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD M  K    ++++YNTLI+G+CK+  ++KA  L+ +M  ++++PN ++Y  LI+G
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + +A  L++EMV +G  P LV+  T+    C++    KA   L  +     DPD
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              Y T+++G  R   ++ A  L S + ++GL P+V TYN+++ G C+QG + ++  +  
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M + G +P+  TY  +  G +  N         +EML RGF  D
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 559



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 152/471 (32%), Positives = 262/471 (55%), Gaps = 1/471 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+LC  +++D A   L ++ + G  PD  T+ TLI   C EG + EA  L + M G+G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G    A  +L  M Q    P+   ++TL+   C+   ++EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF EM  +G++P+IV++++LI    +  +         EM  + ++PD      +++  
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  + D M+ +G   +VVTYN +++G C    +  A  +F+ M+ +    + 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI+G+CK  +++KA+ LF+ M+++ + P+ VTYNTLI G C VG ++ A  L+ +
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++R   P+ ++Y  L +  C   H+ +A  L   + G    P +    TI+ G CR+G+
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ P+  +YN +I+G  ++  + +A  L S+M   G  P+  TYN+
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           I  GF R      +  +L  M+ +G + D ST TTL+ G +S + L ++ +
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSVK 580



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 201/385 (52%)

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
           ++++NT   +      + EA   F  M  +   P  V F+ L+   ++       L   R
Sbjct: 35  SSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSR 94

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           +M S G+ PD     I+IN  C    V  A     ++L+ G   D  T+ T++ GLC   
Sbjct: 95  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            + EA  LF++M+  G  P+  T+ TLI+G CK GN + A+ L   M Q + +P++V ++
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           TLID  CK  ++ +A  ++++MI++ ISPN ++Y  LI+G C +        L  EMV  
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
            I P + + NT++   C+ G  ++A + +  M+  GV+P+ ++YN L++G      +D A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             +   M ++  V +VI+YN ++ G+C+   +  +  +   M  + L P+  TY TLI+G
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
                 L++A     EM+ RG +PD
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPD 419


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  295 bits (754), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 263/468 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A   L  M + GV P+ +TYN++++ YC     +EA   +  M   G
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYNSL++ LCK GR   A+++ D M + GL PD ATY TLL     K  + E  
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMH 356

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G+ PD   F+ LI  +++  ++D A++ F +M+  GL P+ V Y  +I   
Sbjct: 357 ALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL 416

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V +A+   ++M+++G   +++ Y ++++ LC      +A++L  EML+RG+  + 
Sbjct: 417 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNT 476

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F ++IH HCK+G + ++  LFD+M +  +KP+++TY+TLIDG+C  G+M++A KL + 
Sbjct: 477 IFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSS 536

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  + P+ ++Y  LINGYC +  + +A  L+ EMV  G+ P +++ N I++G   +  
Sbjct: 537 MFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 596

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    +   G   +  +YN +++G  +    D+A  +   +    L  +  T+N+
Sbjct: 597 TAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 656

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           ++    + GR  +++ +       GL P+  TY  +    + Q  L+E
Sbjct: 657 MIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 154/474 (32%), Positives = 257/474 (54%), Gaps = 3/474 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK---GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++  LC +++   A   L  M      G  PD V+Y T+IN + +EG  ++A+   + M 
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            + + P V TY+S+I  LCK    D+A EVL  M++ G+ P+  TYN++L   C  E   
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA     +M   GV PD+V++++L+    +NG+   A   F  M   GL PD   Y  ++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            GY   G ++E   + D M+  G   D   +N ++    + + + EA  +F++M + G+ 
Sbjct: 344 QGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  +I   CK G+++ A+  F+ M  + + P+I+ Y +LI   C   + +KA +L
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M+ R I  N I +  +I+ +C  G V E+ +L+  MV  G+KP +++ +T+I GYC 
Sbjct: 464 ILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +G   +A + LS M S G+ PD ++YNTLING+ R   MD A AL  +M + G+ P++IT
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           YN+IL G     R   ++ +   + + G   + STY  +++G    N   EA R
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 241/463 (52%), Gaps = 4/463 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P   TY  LI   CR G L+  F  + ++  KG +    T+  L+ GLC   R   A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR---GVAPDIVSFSTL 141
           + VL  M ++   PD  +   LL   C +    EA E+   M+     G APD+VS++T+
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F + G  D+A   + EM    + PD V Y+ II   C+   + +A+++   M++ G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + + +TYN+IL+G C ++   EA     +M   GV PD  T+ +L+   CK+G   +A  
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +FD MT++ ++PDI TY TL+ G+   G + + + L   M+   I P++  + ILI  Y 
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
               V EA  ++ +M   G+ P +V+   +I   C+SG    A  +  +M+ EG+ P+ I
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            Y +LI+     +  DKA  L+ +M ++G+  + I +N I+   C++GR+ +SE +   M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  G+ P+  TY+TLI+G+     + EA +    M   G  PD
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 257/488 (52%), Gaps = 4/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++   C+  ++D     L  + +KG   + +T+  L+   C +    +A  + +  M+  
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ---MGLSPDTATYNTLLVESCRKENM 116
              P VF+   L+ GLC + R   A E+L  M      G +PD  +Y T++    ++ + 
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A   + EM  R ++PD+V++S++I    +   +D+A+     M   G++P+ + Y  I
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++GYC +    EA+    +M   G   DVVTYN++++ LC+    TEA  +F+ M +RG+
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD  T+ TL+ G+   G + +   L D+M +  I PD   +N LI  + K  ++++A  
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +++ M    ++PN ++YG +I   C  G V +A   + +M+ +G+ P ++   ++I   C
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
                 KA+E + +M+  G+  ++I +N++I+   +E  + ++  L   M   G+ P+VI
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY+ ++ G+C  G+M ++  +L  M   G+ PD  TY TLING+   + + +A     EM
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572

Query: 477 LQRGFVPD 484
           +  G  P+
Sbjct: 573 VSSGVSPN 580



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 200/374 (53%), Gaps = 1/374 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K  K+D A +   +M Q G+ P+ VTY  +I   C+ G +++A      M  +G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P +  Y SLI+ LC   + D+A+E++ EML  G+  +T  +N+++   C++  + E+E
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV P+++++STLI  +   G++D A      M S G+ PD V Y  +INGY
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   + +AL +  EM+  G   +++TYN IL GL   +    A +L+  + + G   + 
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   ++AL +F  +    ++ +  T+N +I    KVG  ++A  L+  
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVA 676

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
             S  + PNY +Y ++       G + E  +L++ M   G        N I++   + G+
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 361 ASKADEFLSKMVSE 374
            ++A  +LS M+ E
Sbjct: 737 ITRAGTYLS-MIDE 749



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 146/310 (47%), Gaps = 16/310 (5%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG---VFPDFYTFT 244
           +A  + DE+L +G    +   N  L  + R      A   +N M   G   V P  +T+ 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI   C+ G ++        + +K  + + +T+  L+ G C     +K      D++ R
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA----DKRTSDAMDIVLR 147

Query: 305 KIS-----PNYISYGILINGYCSMGHVTEAFRLWYEMV---GKGIKPTLVSCNTIIKGYC 356
           +++     P+  S  IL+ G C      EA  L + M    G G  P +VS  T+I G+ 
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + GD+ KA     +M+   + PD ++Y+++I    + + MDKA  +++ M   G++P+ +
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN IL G+C   +  ++   L +M   G+ PD  TY +L++         EA +  D M
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327

Query: 477 LQRGFVPDDA 486
            +RG  PD A
Sbjct: 328 TKRGLEPDIA 337


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  295 bits (754), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 158/478 (33%), Positives = 257/478 (53%), Gaps = 3/478 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L ++ +++    FL  M  +G  PD +   +LI  +CR G  ++A ++M  +   G  P 
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V TYN LI G CK G  D+A EVL+   +M ++PD  TYNT+L   C    + EA E+  
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLE---RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLD 232

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
              +R   PD+++++ LI     +  + +A+    EM+  G  PD V Y ++ING C+ G
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA+K  + M   GC  +V+T+N IL  +C      +A+ L ++ML +G  P   TF 
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI+  C+   + +A+++ + M +    P+ ++YN L+ GFC+  +M++A +    M+SR
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y  L+   C  G V  A  +  ++  KG  P L++ NT+I G  + G    A
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 472

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E L +M  +G+ PD I+Y+TL+ G  RE  +D+A  +   ME   + P  +TYN I+ G
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            C+  +   +   L  M+EKG  P  +TYT LI G   +   +EA    +E+  RGFV
Sbjct: 533 LCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNELCSRGFV 590



 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 134/425 (31%), Positives = 233/425 (54%), Gaps = 3/425 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  K   A   +  +E  G  PD +TYN LI  YC+ G +++A +++  MS   
Sbjct: 147 LIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS--- 203

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+++  LC  G+   A EVLD  LQ    PD  TY  L+  +C    + +A 
Sbjct: 204 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAM 263

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM ++G  PD+V+++ LI    + G+LD A+ +   M S G  P+ + + II+   
Sbjct: 264 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSM 323

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  ++A ++  +ML KGC   VVT+N ++N LCR ++L  A D+  +M + G  P+ 
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  L+HG C++  M++A+   +IM  +   PDIVTYNTL+   CK G+++ A ++   
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+  SP  I+Y  +I+G   +G    A  L  EM  KG+KP +++ +T+++G  R G 
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    M    + P +++YN ++ G  + +   +A   ++ M  +G  P   TY +
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563

Query: 421 ILTGF 425
           ++ G 
Sbjct: 564 LIEGI 568



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 139/382 (36%), Positives = 220/382 (57%), Gaps = 5/382 (1%)

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           N  L +  R   + E  +    M  +G  PD+++ ++LI  F R+G+  +A      +++
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLT 222
           +G VPD + Y ++I GYC++G + +AL    E+LE+  V  DVVTYNTIL  LC +  L 
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKAL----EVLERMSVAPDVVTYNTILRSLCDSGKLK 225

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           EA ++ +  L+R  +PD  T+T LI   C D  + +A+ L D M +K  KPD+VTYN LI
Sbjct: 226 EAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLI 285

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +G CK G +++A K   +M S    PN I++ I++   CS G   +A RL  +M+ KG  
Sbjct: 286 NGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCS 345

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P++V+ N +I   CR     +A + L KM   G  P+S+SYN L++GF +E+ MD+A   
Sbjct: 346 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEY 405

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           +  M ++G  PD++TYN +LT  C+ G++  +  IL ++  KG +P   TY T+I+G   
Sbjct: 406 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTK 465

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
               + A    +EM ++G  PD
Sbjct: 466 VGKTEYAVELLEEMRRKGLKPD 487



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 218/410 (53%), Gaps = 4/410 (0%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
           F  N  +  L + G  +   + L+ M+  G  PD     +L+   CR     +A  I   
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           +   G  PD+++++ LIG + ++G++D+AL     M  A   PD V Y  I+   C +G 
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGK 223

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + EA+++ D  L++ C  DV+TY  ++   C    + +A  L +EM ++G  PD  T+  
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI+G CK+G +++A+   + M     KP+++T+N ++   C  G    A +L +DM+ + 
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
            SP+ +++ ILIN  C    +  A  +  +M   G  P  +S N ++ G+C+     +A 
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E+L  MVS G  PD ++YNTL+    ++  +D A  +++++ ++G  P +ITYN ++ G 
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR-FHD 474
            + G+   +  +L  M  KGL PD  TY+TL+ G   +  + EA + FHD
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHD 513



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +  + N  +   VR   +++    + +M  QG +PDVI    ++ GFCR G+   +  I+
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             +   G  PD  TY  LI G+     + +A     E+L+R  V  D
Sbjct: 165 EILENSGAVPDVITYNVLIGGYCKSGEIDKAL----EVLERMSVAPD 207


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  294 bits (753), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 278/484 (57%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ + D A     EM  +G+ P+ VTY  LI+A C+ G +E+A  L + M  KG
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+ YNSLING CK+G  DRA+ +L  M++ GL+P  A+Y+ L+   CR  ++S   
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM+ RG+A +  +F+ LI  F ++ ++D A   F +M  + ++P+ V + ++I GY
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 546

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A ++ D+M+E G   D  TY ++++GLC    +++A++   ++       + 
Sbjct: 547 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 606

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++ T L++G  ++G   +  +L+D M  + +K D+V++  ++    K  + EK+  L+ +
Sbjct: 607 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 666

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+ I Y  +I+      ++ +A   W +MV  G  P  V+   +I   C+SG 
Sbjct: 667 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 726

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A+    +M++  V P+  +YN  ++ F  E +M+KA  L S M  QG +  ++++N+
Sbjct: 727 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 785

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ ++  ++ ++ E G +PD  +Y+T+I+      ++ +AF   +EML +G
Sbjct: 786 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 845

Query: 481 FVPD 484
             PD
Sbjct: 846 LKPD 849



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 248/478 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+  +++ A     +M + G  P     + +I+   ++  +EEAF L   +   G
Sbjct: 297 LVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLG 356

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF YN+LI+ LCK  R D A  +  EM   GL P+  TY  L+   C++  + +A 
Sbjct: 357 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 416

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G+   +  +++LI  + + G LDRA      M   GL P    Y+ +I G 
Sbjct: 417 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 476

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG +   +++  EM E+G   +  T+  ++NG C+ K + EA  LF++M++  V P+ 
Sbjct: 477 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 536

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  +I G+C  GN+ KA  L+D M +  +KPD  TY +LI G C    + KAN+  AD
Sbjct: 537 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 596

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +     N  S   L+ G+   G  TE + LW EM  +G+K  LVS   I+    +  D
Sbjct: 597 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 656

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K+     +M  +GV PD I Y  +I+   +EENM +A     +M   G  P+ +T+ V
Sbjct: 657 KEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 716

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++   C+ G +  +EL+   M+   + P++ TY   ++   ++ ++++A   H  MLQ
Sbjct: 717 LINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ 774



 Score =  277 bits (708), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 268/483 (55%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A C+   +D A+  +  ME +GV    V YN L+   C+   ++EA ++ N M   G+
Sbjct: 228 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 287

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
                TY +L+ G C+    + A  +  +M+++G  P  A  + ++ E  +KE + EA  
Sbjct: 288 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 347

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           + C++   G+ P++ +++ LI    +N + D A   F+EM   GL P+ V Y I+I+  C
Sbjct: 348 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 407

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G + +AL + D+M +KG  + V  YN+++NG C+   L  A  L + M++ G+ P   
Sbjct: 408 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 467

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           +++ LI G C++G+++  + L   M ++ I  +  T+  LI+GFCK  +M++A +L+  M
Sbjct: 468 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 527

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           I   + PN +++ ++I GYC +G++ +AF+L+ +MV  G+KP   +  ++I G C +   
Sbjct: 528 IDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 587

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           SKA+EF++ + +     ++ S   L+ GF RE    + + L  +M  +G+  D++++ +I
Sbjct: 588 SKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTII 647

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +    +Q     S ++   M E+G+ PD   YT +I+    + N+ +A    D+M+  G+
Sbjct: 648 VYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGY 707

Query: 482 VPD 484
            P+
Sbjct: 708 SPN 710



 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 254/484 (52%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +L K  +   A+    +M Q GV+ D   Y   I AYC    L+ A  L+  M  +G+K 
Sbjct: 195 SLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKA 254

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
               YN L+ GLCK  R   A EV + M+ +G++ D  TY TL+   CR E +  A  I 
Sbjct: 255 SAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRIT 314

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M R G  P   + S +I    +   ++ A     ++   G+VP+   Y  +I+  C+N
Sbjct: 315 HDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 374

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
               +A ++  EM  +G   + VTY  +++ LC+  M+ +A  LF++M ++G+    Y +
Sbjct: 375 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 434

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +LI+G+CK G++++A  L   M ++ + P   +Y+ LI G C+ G++    +L  +M  
Sbjct: 435 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 494

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R I+ N  ++  LING+C    + EA RL+ +M+   + P  V+ N +I+GYC  G+  K
Sbjct: 495 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 554

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A +   +MV  G+ PD+ +Y +LI+G      + KA   V+ +EN   V +  +   +L 
Sbjct: 555 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 614

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GF R+GR  ++  +   M  +G+  D  ++T ++   + Q++ +++     EM ++G  P
Sbjct: 615 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 674

Query: 484 DDAF 487
           DD F
Sbjct: 675 DDIF 678



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 213/390 (54%), Gaps = 1/390 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CKD K+D A     +M    V P+ VT+N +I  YC  G + +AFQL + M   G
Sbjct: 507 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 566

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TY SLI+GLC      +A E + ++       +  +   LL    R+   +E  
Sbjct: 567 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 626

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+ RGV  D+VSF+ ++    +    +++ + FREMK  G+ PD++ YT +I+  
Sbjct: 627 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 686

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   +++AL   D+M+  G   + VT+  ++N LC++  L  A+ L  EML   V P+ 
Sbjct: 687 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 746

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+   +     +G+M KA +L   M Q  +   IV++N LI G CK G++++A  L + 
Sbjct: 747 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSK 805

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +     SP+ ISY  +I+  C MG + +AF LW EM+ KG+KP +V+ N  I+     G+
Sbjct: 806 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGE 865

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           + KA    + M+  GV P+  +Y  L++G 
Sbjct: 866 SDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 210/399 (52%)

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           VL   L  G++ +  T + +L    +    + A ++F +M + GV  D   ++  I  + 
Sbjct: 173 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 232

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
            +  LD A      M+S G+    V Y +++ G C+N  V EA+++++ M+  G   D V
Sbjct: 233 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 292

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TY T++ G CR + L  A  + ++M+  G  P     + +I    K   + +A +L   +
Sbjct: 293 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 352

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               + P++  YN LID  CK    + A++L+ +M  R + PN ++Y ILI+  C  G +
Sbjct: 353 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 412

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A  L+ +M  KGIK T+   N++I GYC+ G   +A   LS MV EG+ P + SY+ L
Sbjct: 413 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 472

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G  R  ++     L  +M  +G+  +  T+  ++ GFC+  +M ++  +  +MI+  +
Sbjct: 473 IAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 532

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            P+  T+  +I G+    N+++AF+ +D+M++ G  PD+
Sbjct: 533 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 571



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 210/413 (50%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+    +T + ++  L K  +   A+++ D+MLQ G+  D   Y   +   C   N+  A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +   M   GV    V ++ L+    +N ++  A+     M + G+  D V Y  ++ G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR   +  AL++  +M+  G V      + +++ L + +++ EA  L  ++ + G+ P+
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            + +  LI   CK+   + A  LF  M  + ++P+ VTY  LI   CK G +E A  L+ 
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  + I      Y  LINGYC  G +  A  L   MV +G+ PT  S + +I G CR+G
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D S   E   +M   G+  ++ ++  LINGF +++ MD+A  L  KM +  ++P+ +T+N
Sbjct: 481 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 540

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           V++ G+C  G +  +  +  +M+E GL PD  TY +LI+G    + + +A  F
Sbjct: 541 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 593


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  294 bits (753), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 255/483 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN  CK   +  A+++  ++ Q G++PDT TY +LI  +CR   ++ A+++   M  KG
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +LI+GLC+ GR + A ++  +M +    P   TY  L+          EA 
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G  P++ +++ LI    +  ++D A     EM   GL+P  V Y  +I+GY
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A ++ D M    C  +  TYN ++ GLC+ + + +A  L N+MLER + P  
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LIHG CK  ++  A  L  +M +  + PD  TY+  ID  CK G +E+A  L+  
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + ++ +  N + Y  LI+GYC +G +  A+ L   M+     P   + N +I+G C+   
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   ++KM++ GV P  ++Y  LI   +++   D A  + + M + G  PDV TY  
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            L  +  QG + + + ++ +M E+G+ PD  TYT LI+G+        AF F   M+  G
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679

Query: 481 FVP 483
             P
Sbjct: 680 CKP 682



 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 158/483 (32%), Positives = 257/483 (53%), Gaps = 17/483 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK++K+D A+  L EM +KG+ P  VTYN LI+ YC+EG +++AF++++ M    
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN LI GLCKK +  +A  +L++ML+  LSP   TYN+L+   C+  ++  A 
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+  G+ PD  ++S  I    + G+++ A   F  +K+ G+  + V+YT +I+GY
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A  + + ML   C+ +  TYN ++ GLC+ K + EA  L  +ML  GV P  
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI    KDG  + AL +F+ M     +PD+ TY   +  +   G +E+ + + A 
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I P+ ++Y +LI+GY  +G    AF     MV  G KP+L   + +IK       
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL----- 694

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              + E   K     +  DS+S NTL          + A  L  KM   G   DV  Y  
Sbjct: 695 ---SHENRMKETRSEIGIDSVS-NTL--------EYEIALKLFEKMVEHGCTIDVSIYGA 742

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+Q R+ +++ ++  M E+G++P    Y +L++         EA R  D M++ G
Sbjct: 743 LIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 802

Query: 481 FVP 483
            +P
Sbjct: 803 LLP 805



 Score =  284 bits (726), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 156/474 (32%), Positives = 251/474 (52%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID  K    E+    + P+  T+N ++N YC+ G + EA    + +   GL P  FTY S
Sbjct: 175 IDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTS 234

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI G C+    D A EV   M Q G   +  +Y  L+   C    ++EA ++F +M+   
Sbjct: 235 LILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P + +++ LI   S +G+   AL  F EMK  G  P+   YT++I+G C+   + EA 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           KM  EM EKG +  VVTYN +++G C+  M+ +A ++ + M      P+  T+  LI G 
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK   ++KA+ L + M ++ + P ++TYN+LI G CKV ++E A +L + M    + P+ 
Sbjct: 415 CKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +Y + I+  C  G V EA  L+  +  KG+K   V    +I GYC+ G    A   L +
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+++   P+S +YN LI G  +E+ M +A +LV+KM   G+ P V+TY +++    + G 
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              +  +   M+  G  PD  TYT  ++ + SQ  L+E      +M + G +PD
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648



 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 247/457 (54%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    YNT++ +  +   ++E   +   +    + P ++T+N+++NG CK G    A+  
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +++Q GL PDT TY +L++  CR + +  A E+F  M ++G   + VS++ LI     
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+++ AL  F +M      P    YT++I     +G  +EAL + +EM EKGC  +V T
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHT 336

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y  +++GLC+   + EA  + +EM E+G+ P   T+  LI G+CK+G ++ A  + D+M 
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
             S  P+  TYN LI G CK  ++ KA  L   M+ RK+SP+ I+Y  LI+G C +  + 
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A+RL   M   G+ P   + +  I   C+ G   +A      + ++GV  + + Y  LI
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+ +   +D A++L+ +M N   +P+  TYNV++ G C++ +M ++  ++ +M+  G+ 
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK 576

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P   TYT LI   +       A +  + M+  G+ PD
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 246/503 (48%), Gaps = 18/503 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  +I+ A     +M +    P   TY  LI A    G   EA  L N M  KG
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY  LI+GLCK+ + D A+++L EM + GL P   TYN L+   C++  + +A 
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI   M      P+  +++ LI    +  ++ +A+    +M    L P  + Y  +I+G 
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A ++   M E G V D  TY+  ++ LC+   + EA  LF+ +  +GV  + 
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T LI G+CK G ++ A +L + M   +  P+  TYN LI+G CK  +M++A+ L A 
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++  + P  ++Y ILI      G    A +++  MV  G +P + +    +  Y   G 
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             + D+ ++KM  EG+ PD ++Y  LI+G+ R     +AF  +  M + G  P +   ++
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689

Query: 421 ILTGFCRQGRMHD--SEL----------------ILWRMIEKGLNPDRSTYTTLINGHVS 462
           ++     + RM +  SE+                +  +M+E G   D S Y  LI G   
Sbjct: 690 LIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 749

Query: 463 QNNLKEAFRFHDEMLQRGFVPDD 485
           Q  L+EA      M +RG  P +
Sbjct: 750 QERLEEAQGLVHHMKERGMSPSE 772



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 223/445 (50%), Gaps = 18/445 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK + ++SA   L  M + G+ PD  TY+  I+  C+EG +EEA  L +S+  KG
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y +LI+G CK G+ D A  +L+ ML     P++ TYN L+   C+++ M EA 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   GV P +V+++ LIG   ++G  D AL  F  M S G  PD   YT  ++ Y
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + E   +  +M E+G + D+VTY  +++G  R  +   A D    M++ G  P  
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684

Query: 241 YTFTTLIHGHCKDGNMNK------------------ALNLFDIMTQKSIKPDIVTYNTLI 282
           Y  + LI     +  M +                  AL LF+ M +     D+  Y  LI
Sbjct: 685 YIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALI 744

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            GFC+   +E+A  L   M  R +SP+   Y  L++  C +G   EA RL   MV  G+ 
Sbjct: 745 AGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLL 804

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P L S   ++ G    G   KA      ++S G + D +++  LI+G ++ + +D+   L
Sbjct: 805 PLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSEL 864

Query: 403 VSKMENQGLVPDVITYNVILTGFCR 427
           +  ME +G  P+ +TY++++ G  R
Sbjct: 865 IDIMEEKGCQPNPLTYSLLIEGLER 889



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 183/376 (48%), Gaps = 18/376 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  KID A   L  M      P++ TYN LI   C+E  ++EA  L+  M   G
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V TY  LI  + K G  D A +V + M+ +G  PD  TY   L     +  + E +
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M+  G+ PD+V+++ LI  ++R G   RA  + + M   G  P   + +I+I   
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694

Query: 181 CRNGFVLE------------------ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
                + E                  ALK+ ++M+E GC +DV  Y  ++ G C+ + L 
Sbjct: 695 SHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 754

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           EA  L + M ERG+ P    + +L+   CK G   +A+ L D M +  + P + +Y  L+
Sbjct: 755 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 814

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            G    G  EKA  ++  ++S   + + +++ +LI+G      V E   L   M  KG +
Sbjct: 815 CGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQ 874

Query: 343 PTLVSCNTIIKGYCRS 358
           P  ++ + +I+G  R+
Sbjct: 875 PNPLTYSLLIEGLERT 890



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 169/382 (44%), Gaps = 93/382 (24%)

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEAD--------------------DLFNEMLERGV 236
           L  G   +V +Y+++LN L RA++L  A+                    ++F +M   G 
Sbjct: 93  LRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGE 152

Query: 237 F--------------------------------------PDFYTFTTLIHGHCKDGN--- 255
           F                                      P+ YTF  +++G+CK GN   
Sbjct: 153 FKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVE 212

Query: 256 --------------------------------MNKALNLFDIMTQKSIKPDIVTYNTLID 283
                                           ++ A  +F IM QK  + + V+Y  LI 
Sbjct: 213 AELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIH 272

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           G C+ G + +A KL+ADM      P   +Y +LI      G   EA  L+ EM  KG +P
Sbjct: 273 GLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEP 332

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            + +   +I G C+     +A + LS+M  +G+ P  ++YN LI+G+ +E  +D AF ++
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
             ME+    P+  TYN ++ G C++ ++H +  +L +M+E+ L+P   TY +LI+G    
Sbjct: 393 DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452

Query: 464 NNLKEAFRFHDEMLQRGFVPDD 485
           N+L+ A+R    M + G VPD 
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQ 474


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  294 bits (753), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 155/475 (32%), Positives = 249/475 (52%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A      M  K   P TV +N L+ +  +         L   M   G+ P V+T   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +IN LC   R D A   L ++L++G  PD  T+ TL+   C +  + EA  +F +M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P++V++ TLI    + G    A+   R M+     P+ V+++ +I+  C++  V EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM+ KG   ++VTYN++++GLC+         L NEM++  + PD +T  T++   
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+G + +A ++ D+M  + ++P++VTYN L+DG C   E++ A K++  M+ +    N 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ISY  LINGYC +  V +A  L+ EM  + + P  V+ NT+I G C  G    A     +
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV+ G  PD ++Y TL +   +  ++DKA AL+  +E     PD+  Y  IL G CR G 
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           + D+  +   +  KGL P+  TY  +I+G   Q  L EA +   EM + G  P+D
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525



 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 149/465 (32%), Positives = 254/465 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ PD  T   +IN+ C    ++ AF  +  +   G +P   T+ +LI GLC +G
Sbjct: 95  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+M+  G  P+  TY TL+   C+  N S A  +   M +    P++V FS
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TLI    ++ Q+  A   F EM + G+ P+ V Y  +I+G C+         + +EM++ 
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + DV T NT+++ LC+  M+ EA D+ + M+ RGV P+  T+  L+ GHC    ++ A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD M  K    ++++YNTLI+G+CK+  ++KA  L+ +M  ++++PN ++Y  LI+G
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + +A  L++EMV +G  P LV+  T+    C++    KA   L  +     DPD
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              Y T+++G  R   ++ A  L S + ++GL P+V TYN+++ G C+QG + ++  +  
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M + G +P+  TY  +  G +  N         +EML RGF  D
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 559



 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 152/471 (32%), Positives = 262/471 (55%), Gaps = 1/471 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+LC  +++D A   L ++ + G  PD  T+ TLI   C EG + EA  L + M G+G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G    A  +L  M Q    P+   ++TL+   C+   ++EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF EM  +G++P+IV++++LI    +  +         EM  + ++PD      +++  
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  + D M+ +G   +VVTYN +++G C    +  A  +F+ M+ +    + 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI+G+CK  +++KA+ LF+ M+++ + P+ VTYNTLI G C VG ++ A  L+ +
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++R   P+ ++Y  L +  C   H+ +A  L   + G    P +    TI+ G CR+G+
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ P+  +YN +I+G  ++  + +A  L S+M   G  P+  TYN+
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           I  GF R      +  +L  M+ +G + D ST TTL+ G +S + L ++ +
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSVK 580



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 201/385 (52%)

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
           ++++NT   +      + EA   F  M  +   P  V F+ L+   ++       L   R
Sbjct: 35  SSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSR 94

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           +M S G+ PD     I+IN  C    V  A     ++L+ G   D  T+ T++ GLC   
Sbjct: 95  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            + EA  LF++M+  G  P+  T+ TLI+G CK GN + A+ L   M Q + +P++V ++
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           TLID  CK  ++ +A  ++++MI++ ISPN ++Y  LI+G C +        L  EMV  
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
            I P + + NT++   C+ G  ++A + +  M+  GV+P+ ++YN L++G      +D A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             +   M ++  V +VI+YN ++ G+C+   +  +  +   M  + L P+  TY TLI+G
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
                 L++A     EM+ RG +PD
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPD 419


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  294 bits (753), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 269/484 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K +K +       +M+  G+  D  TY+  IN +CR   L  A  ++  M   G
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M++MG  PDT T+ TL+         SEA 
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +RG  PD+V++ T++    + G +D AL   ++M+   +  D V+Y  II+G 
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM  KG   DV TY+++++ LC     ++A  L ++M+ER + P+ 
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ LI    K+G + +A  L+D M ++SI PDI TY++LI+GFC    +++A  ++  
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS+   PN ++Y  LI G+C    V E   L+ EM  +G+    V+  T+I G+ ++ D
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +MVS GV P+ ++YN L++G  +   + KA  +   ++   + PD+ TYN+
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG++P+   Y T+I+G   + + +EA     +M + G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568

Query: 481 FVPD 484
            +P+
Sbjct: 569 PLPN 572



 Score =  287 bits (734), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 144/483 (29%), Positives = 269/483 (55%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N  C+  ++  A   L +M + G  PD VT ++L+N YC    + +A  L++ M   G 
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP  FT+ +LI+GL    +   A  ++D+M+Q G  PD  TY T++   C++ ++  A  
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  +M +  +  D+V ++T+I    +   +D AL  F EM + G+ PD   Y+ +I+  C
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
             G   +A ++  +M+E+    +VVT++ +++   +   L EA+ L++EM++R + PD +
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+++LI+G C    +++A ++F++M  K   P++VTY+TLI GFCK   +E+  +L+ +M
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R +  N ++Y  LI+G+        A  ++ +MV  G+ P +++ N ++ G C++G  
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           +KA      +    ++PD  +YN +I G  +   ++  + L   +  +G+ P+VI YN +
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           ++GFCR+G   +++ +L +M E G  P+  TY TLI   +   + + +     EM   GF
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604

Query: 482 VPD 484
             D
Sbjct: 605 AGD 607



 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 264/484 (54%), Gaps = 4/484 (0%)

Query: 3   NALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK 62
           N L    K+D A     +M +   +P  V +N L++A  +    E    L   M   G+ 
Sbjct: 56  NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
             ++TY+  IN  C++ +   A  VL +M+++G  PD  T ++LL   C  + +S+A  +
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175

Query: 123 FCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
             +M   G  PD  +F+TLI G+F  N +   A+    +M   G  PD V Y  ++NG C
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHN-KASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 182 RNGFVLEALKMRDEMLEKGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           + G +  AL +  +M EKG +  DVV YNTI++GLC+ K + +A +LF EM  +G+ PD 
Sbjct: 235 KRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI   C  G  + A  L   M ++ I P++VT++ LID F K G++ +A KL+ +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI R I P+  +Y  LING+C    + EA  ++  M+ K   P +V+ +T+IKG+C++  
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +  E   +M   G+  ++++Y TLI+GF +  + D A  +  +M + G+ P+++TYN+
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C+ G++  + ++   +    + PD  TY  +I G      +++ +     +  +G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533

Query: 481 FVPD 484
             P+
Sbjct: 534 VSPN 537



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 148/436 (33%), Positives = 242/436 (55%), Gaps = 1/436 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L   +K   A   + +M Q+G  PD VTY T++N  C+ G ++ A  L+  M    
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V  YN++I+GLCK    D A  +  EM   G+ PD  TY++L+   C     S+A 
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + P++V+FS LI  F + G+L  A   + EM    + PD   Y+ +ING+
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA  M + M+ K C  +VVTY+T++ G C+AK + E  +LF EM +RG+  + 
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLIHG  +  + + A  +F  M    + P+I+TYN L+DG CK G++ KA  ++  
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+  +Y I+I G C  G V + + L+  +  KG+ P +++ NT+I G+CR G 
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +AD  L KM  +G  P+S +YNTLI   +R+ + + +  L+ +M + G   D  T  +
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613

Query: 421 ILTGFCRQGRMHDSEL 436
           + T     GR+  S L
Sbjct: 614 V-TNMLHDGRLDKSFL 628



 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 252/458 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I  A   + +M + G  PDT T+ TLI+         EA  L++ M  +G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TY +++NGLCK+G  D A  +L +M +  +  D   YNT++   C+ ++M +A 
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+ PD+ ++S+LI      G+   A     +M    + P+ V ++ +I+ +
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G ++EA K+ DEM+++    D+ TY++++NG C    L EA  +F  M+ +  FP+ 
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI G CK   + + + LF  M+Q+ +  + VTY TLI GF +  + + A  ++  
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + PN ++Y IL++G C  G + +A  ++  +    ++P + + N +I+G C++G 
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    +  +GV P+ I+YNT+I+GF R+ + ++A +L+ KM+  G +P+  TYN 
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++    R G    S  ++  M   G   D ST   + N
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 86/170 (50%)

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
           IL N    +  V +A  L+ +MV     P++V  N ++    +            +M + 
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+  D  +Y+  IN F R   +  A A+++KM   G  PD++T + +L G+C   R+ D+
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++ +M+E G  PD  T+TTLI+G    N   EA    D+M+QRG  PD
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  294 bits (752), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 153/459 (33%), Positives = 253/459 (55%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  T+N +I+  C+EG L EA  L + M   G  P V T+NSLI+G  K G  D  +++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           ++EM + G   D  TYN L+   C+   M  A   F  M R GV  ++V+FST +  F +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +  A+  F +M+  G+  +   YT +I+G C+ G + +A+ + DEM+ +G  ++VVT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y  +++GLC+ + + EA+D+   M + GV  +   +TTLIHGH  + N  KAL L   M 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K ++ DI  Y  LI G C V ++++A  L   M    + PNYI Y  +++     G V 
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +++  G +P +++   +I G C++G   +A    +KM   G+DP+  +Y  L+
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  +   +++A  L ++M ++G+  D + Y  +L G+ +QG +HD+  +  +MI+ GL 
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            D   YT  I+G  + N + EA     EM+  G  PD A
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRA 644



 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 259/476 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ ++  A+     M++ G  PD VT+N+LI+ Y + G L+E  QL+  M   G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  V TYN+LIN  CK GR + A      M + G+  +  T++T +   C++  + EA 
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M  RG+A +  +++ LI    + G+LD A++   EM   G+  + V YT++++G 
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA  +   M + G   + + Y T+++G    K   +A  L +EM  +G+  D 
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LI G C    +++A +L   M +  ++P+ + Y T++D   K G++ +A  +   
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++     PN I+Y  LI+G C  G + EA   + +M   G+ P + +   ++ G C++G 
Sbjct: 494 ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC 553

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +  ++MV +G+  D + Y  L++G++++ N+  AFAL +KM + GL  D+  Y  
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 613

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            ++GFC    M ++  +   MI  G+ PDR+ Y  LI+ +    NL+EA    DEM
Sbjct: 614 FISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 230/407 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++++A  +   M+++GV  + VT++T ++A+C+EG + EA +L   M  +G
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +    FTY  LI+G CK GR D A  +LDEM++ G+  +  TY  L+   C++  ++EAE
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + GV  + + ++TLI     N   ++AL    EMK+ GL  D  LY  +I G 
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA  +  +M E G   + + Y T+++   ++  + EA  +  ++L+ G  P+ 
Sbjct: 444 CNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNV 503

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK G++++A++ F+ M    + P++  Y  L+DG CK G + +A +L+ +
Sbjct: 504 ITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNE 563

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + +S + + Y  L++GY   G++ +AF L  +M+  G++  L      I G+C    
Sbjct: 564 MVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNM 623

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
             +A E  S+M+  G+ PD   YN LI+ + +  N+++A +L  +ME
Sbjct: 624 MPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 247/486 (50%), Gaps = 39/486 (8%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           +TL++     G L++A + +  +    + P   T N ++  L +    DR+  ++  + +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFE 181

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
              +P+  T+N ++   C++  ++EA  +F  M   G  PD+V+F++LI  + + G+LD 
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
                 EM+ +G   D V Y  +IN +C+ G +  A      M  +G + +VVT++T ++
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
             C+  ++ EA  LF +M  RG+  + +T+T LI G CK G ++ A+ L D M ++ +  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 274 DIVTYNTLIDGFC---KVGEM--------------------------------EKANKLW 298
           ++VTY  L+DG C   KV E                                 EKA  L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           ++M ++ +  +   YG LI G C++  + EA  L  +M   G++P  +   T++    +S
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A   L K++  G  P+ I+Y  LI+G  +  ++D+A +  +KM + GL P+V  Y
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++ G C+ G ++++  +   M+ KG++ D+  YT L++G++ Q NL +AF    +M+ 
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID 601

Query: 479 RGFVPD 484
            G   D
Sbjct: 602 SGLQLD 607



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 68/128 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK+  ++ A     EM  KG+  D V Y  L++ Y ++G L +AF L   M   G
Sbjct: 544 LVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  +F Y   I+G C       A+EV  EM+  G++PD A YN L+ +  +  N+ EA 
Sbjct: 604 LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663

Query: 121 EIFCEMSR 128
            +  EM R
Sbjct: 664 SLQDEMER 671


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  294 bits (752), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 153/459 (33%), Positives = 253/459 (55%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  T+N +I+  C+EG L EA  L + M   G  P V T+NSLI+G  K G  D  +++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           ++EM + G   D  TYN L+   C+   M  A   F  M R GV  ++V+FST +  F +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +  A+  F +M+  G+  +   YT +I+G C+ G + +A+ + DEM+ +G  ++VVT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y  +++GLC+ + + EA+D+   M + GV  +   +TTLIHGH  + N  KAL L   M 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K ++ DI  Y  LI G C V ++++A  L   M    + PNYI Y  +++     G V 
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +++  G +P +++   +I G C++G   +A    +KM   G+DP+  +Y  L+
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  +   +++A  L ++M ++G+  D + Y  +L G+ +QG +HD+  +  +MI+ GL 
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            D   YT  I+G  + N + EA     EM+  G  PD A
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRA 644



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 259/476 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ ++  A+     M++ G  PD VT+N+LI+ Y + G L+E  QL+  M   G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  V TYN+LIN  CK GR + A      M + G+  +  T++T +   C++  + EA 
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M  RG+A +  +++ LI    + G+LD A++   EM   G+  + V YT++++G 
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA  +   M + G   + + Y T+++G    K   +A  L +EM  +G+  D 
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LI G C    +++A +L   M +  ++P+ + Y T++D   K G++ +A  +   
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++     PN I+Y  LI+G C  G + EA   + +M   G+ P + +   ++ G C++G 
Sbjct: 494 ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC 553

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +  ++MV +G+  D + Y  L++G++++ N+  AFAL +KM + GL  D+  Y  
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 613

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            ++GFC    M ++  +   MI  G+ PDR+ Y  LI+ +    NL+EA    DEM
Sbjct: 614 FISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 230/407 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++++A  +   M+++GV  + VT++T ++A+C+EG + EA +L   M  +G
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +    FTY  LI+G CK GR D A  +LDEM++ G+  +  TY  L+   C++  ++EAE
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + GV  + + ++TLI     N   ++AL    EMK+ GL  D  LY  +I G 
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA  +  +M E G   + + Y T+++   ++  + EA  +  ++L+ G  P+ 
Sbjct: 444 CNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNV 503

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK G++++A++ F+ M    + P++  Y  L+DG CK G + +A +L+ +
Sbjct: 504 ITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNE 563

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + +S + + Y  L++GY   G++ +AF L  +M+  G++  L      I G+C    
Sbjct: 564 MVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNM 623

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
             +A E  S+M+  G+ PD   YN LI+ + +  N+++A +L  +ME
Sbjct: 624 MPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 247/486 (50%), Gaps = 39/486 (8%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           +TL++     G L++A + +  +    + P   T N ++  L +    DR+  ++  + +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFE 181

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
              +P+  T+N ++   C++  ++EA  +F  M   G  PD+V+F++LI  + + G+LD 
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
                 EM+ +G   D V Y  +IN +C+ G +  A      M  +G + +VVT++T ++
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
             C+  ++ EA  LF +M  RG+  + +T+T LI G CK G ++ A+ L D M ++ +  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 274 DIVTYNTLIDGFC---KVGEM--------------------------------EKANKLW 298
           ++VTY  L+DG C   KV E                                 EKA  L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           ++M ++ +  +   YG LI G C++  + EA  L  +M   G++P  +   T++    +S
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A   L K++  G  P+ I+Y  LI+G  +  ++D+A +  +KM + GL P+V  Y
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++ G C+ G ++++  +   M+ KG++ D+  YT L++G++ Q NL +AF    +M+ 
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID 601

Query: 479 RGFVPD 484
            G   D
Sbjct: 602 SGLQLD 607



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 68/128 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK+  ++ A     EM  KG+  D V Y  L++ Y ++G L +AF L   M   G
Sbjct: 544 LVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  +F Y   I+G C       A+EV  EM+  G++PD A YN L+ +  +  N+ EA 
Sbjct: 604 LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663

Query: 121 EIFCEMSR 128
            +  EM R
Sbjct: 664 SLQDEMER 671


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  294 bits (752), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 278/484 (57%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ + D A     EM  +G+ P+ VTY  LI+A C+ G +E+A  L + M  KG
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+ YNSLING CK+G  DRA+ +L  M++ GL+P  A+Y+ L+   CR  ++S   
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM+ RG+A +  +F+ LI  F ++ ++D A   F +M  + ++P+ V + ++I GY
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A ++ D+M+E G   D  TY ++++GLC    +++A++   ++       + 
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++ T L++G  ++G   +  +L+D M  + +K D+V++  ++    K  + EK+  L+ +
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+ I Y  +I+      ++ +A   W +MV  G  P  V+   +I   C+SG 
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A+    +M++  V P+  +YN  ++ F  E +M+KA  L S M  QG +  ++++N+
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 762

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ ++  ++ ++ E G +PD  +Y+T+I+      ++ +AF   +EML +G
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 481 FVPD 484
             PD
Sbjct: 823 LKPD 826



 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 248/478 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+  +++ A     +M + G  P     + +I+   ++  +EEAF L   +   G
Sbjct: 274 LVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLG 333

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF YN+LI+ LCK  R D A  +  EM   GL P+  TY  L+   C++  + +A 
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G+   +  +++LI  + + G LDRA      M   GL P    Y+ +I G 
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRNG +   +++  EM E+G   +  T+  ++NG C+ K + EA  LF++M++  V P+ 
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  +I G+C  GN+ KA  L+D M +  +KPD  TY +LI G C    + KAN+  AD
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +     N  S   L+ G+   G  TE + LW EM  +G+K  LVS   I+    +  D
Sbjct: 574 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K+     +M  +GV PD I Y  +I+   +EENM +A     +M   G  P+ +T+ V
Sbjct: 634 KEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 693

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++   C+ G +  +EL+   M+   + P++ TY   ++   ++ ++++A   H  MLQ
Sbjct: 694 LINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ 751



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 268/483 (55%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A C+   +D A+  +  ME +GV    V YN L+   C+   ++EA ++ N M   G+
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
                TY +L+ G C+    + A  +  +M+++G  P  A  + ++ E  +KE + EA  
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           + C++   G+ P++ +++ LI    +N + D A   F+EM   GL P+ V Y I+I+  C
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G + +AL + D+M +KG  + V  YN+++NG C+   L  A  L + M++ G+ P   
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           +++ LI G C++G+++  + L   M ++ I  +  T+  LI+GFCK  +M++A +L+  M
Sbjct: 445 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           I   + PN +++ ++I GYC +G++ +AF+L+ +MV  G+KP   +  ++I G C +   
Sbjct: 505 IDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 564

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           SKA+EF++ + +     ++ S   L+ GF RE    + + L  +M  +G+  D++++ +I
Sbjct: 565 SKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTII 624

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +    +Q     S ++   M E+G+ PD   YT +I+    + N+ +A    D+M+  G+
Sbjct: 625 VYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGY 684

Query: 482 VPD 484
            P+
Sbjct: 685 SPN 687



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 254/484 (52%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +L K  +   A+    +M Q GV+ D   Y   I AYC    L+ A  L+  M  +G+K 
Sbjct: 172 SLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKA 231

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
               YN L+ GLCK  R   A EV + M+ +G++ D  TY TL+   CR E +  A  I 
Sbjct: 232 SAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRIT 291

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M R G  P   + S +I    +   ++ A     ++   G+VP+   Y  +I+  C+N
Sbjct: 292 HDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
               +A ++  EM  +G   + VTY  +++ LC+  M+ +A  LF++M ++G+    Y +
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +LI+G+CK G++++A  L   M ++ + P   +Y+ LI G C+ G++    +L  +M  
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 471

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R I+ N  ++  LING+C    + EA RL+ +M+   + P  V+ N +I+GYC  G+  K
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A +   +MV  G+ PD+ +Y +LI+G      + KA   V+ +EN   V +  +   +L 
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GF R+GR  ++  +   M  +G+  D  ++T ++   + Q++ +++     EM ++G  P
Sbjct: 592 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651

Query: 484 DDAF 487
           DD F
Sbjct: 652 DDIF 655



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 213/389 (54%), Gaps = 1/389 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CKD K+D A     +M    V P+ VT+N +I  YC  G + +AFQL + M   G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TY SLI+GLC      +A E + ++       +  +   LL    R+   +E  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 603

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+ RGV  D+VSF+ ++    +    +++ + FREMK  G+ PD++ YT +I+  
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   +++AL   D+M+  G   + VT+  ++N LC++  L  A+ L  EML   V P+ 
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+   +     +G+M KA +L   M Q  +   IV++N LI G CK G++++A  L + 
Sbjct: 724 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSK 782

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +     SP+ ISY  +I+  C MG + +AF LW EM+ KG+KP +V+ N  I+     G+
Sbjct: 783 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGE 842

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLING 389
           + KA    + M+  GV P+  +Y  L++G
Sbjct: 843 SDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 210/399 (52%)

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           VL   L  G++ +  T + +L    +    + A ++F +M + GV  D   ++  I  + 
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
            +  LD A      M+S G+    V Y +++ G C+N  V EA+++++ M+  G   D V
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TY T++ G CR + L  A  + ++M+  G  P     + +I    K   + +A +L   +
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               + P++  YN LID  CK    + A++L+ +M  R + PN ++Y ILI+  C  G +
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A  L+ +M  KGIK T+   N++I GYC+ G   +A   LS MV EG+ P + SY+ L
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G  R  ++     L  +M  +G+  +  T+  ++ GFC+  +M ++  +  +MI+  +
Sbjct: 450 IAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            P+  T+  +I G+    N+++AF+ +D+M++ G  PD+
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 210/413 (50%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+    +T + ++  L K  +   A+++ D+MLQ G+  D   Y   +   C   N+  A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +   M   GV    V ++ L+    +N ++  A+     M + G+  D V Y  ++ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR   +  AL++  +M+  G V      + +++ L + +++ EA  L  ++ + G+ P+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            + +  LI   CK+   + A  LF  M  + ++P+ VTY  LI   CK G +E A  L+ 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  + I      Y  LINGYC  G +  A  L   MV +G+ PT  S + +I G CR+G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D S   E   +M   G+  ++ ++  LINGF +++ MD+A  L  KM +  ++P+ +T+N
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           V++ G+C  G +  +  +  +M+E GL PD  TY +LI+G    + + +A  F
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  294 bits (752), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 163/474 (34%), Positives = 260/474 (54%), Gaps = 2/474 (0%)

Query: 12  DSAKMFLCEMEQK--GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           D+  + L +++    GV  DTV +N L+N       L+    + N M+G+G++P V T N
Sbjct: 142 DAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLN 201

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +LI  LC+  +   A  +L+EM   G++PD  T+ TL+     + ++  A  +  +M   
Sbjct: 202 TLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEA 261

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G +P  V+ + LI  + + G+++ AL Y ++  + G  PD V Y   ++G C+NG V  A
Sbjct: 262 GCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHA 321

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           LK+ D ML++G   DV TYNT++N L +   L EA  + N+M++RG  PD  TF TLI  
Sbjct: 322 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA 381

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
                 + +AL+L   +T K + PD+ T+N LI+  CKVG+     +L+ +M S   +P+
Sbjct: 382 LSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPD 441

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y ILI+  CSMG +  A  L  EM   G   + V+ NTII   C+     +A+E   
Sbjct: 442 EVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFD 501

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M ++G+   ++++NTLI+G  + + +D A  L+ +M  +GL P+ ITYN ILT +C+QG
Sbjct: 502 QMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQG 561

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +  +  IL  M   G   D  TY TLING       + A +    M  +G  P
Sbjct: 562 NIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRP 615



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 159/495 (32%), Positives = 240/495 (48%), Gaps = 36/495 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDT------------------------------ 30
           ++ ALC+ H++ +A + L EM   GV PD                               
Sbjct: 203 LIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG 262

Query: 31  -----VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                VT N LIN YC+ G +E+A   +      G +P   TYN+ ++GLC+ G    A 
Sbjct: 263 CSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHAL 322

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +V+D MLQ G  PD  TYNT++    +   + EA+ I  +M  RG  PD  +F+TLI   
Sbjct: 323 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 382

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S   +L+ AL   RE+   GL PD   + I+IN  C+ G     +++ +EM   GC  D 
Sbjct: 383 SSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDE 442

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYN +++ LC    L  A DL NEM   G      T+ T+I   CK   + +A  +FD 
Sbjct: 443 VTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQ 502

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  + I    VT+NTLIDG CK   ++ A +L   M+   + PN I+Y  ++  YC  G+
Sbjct: 503 MDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGN 562

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +A  +   M   G +  +V+  T+I G C++G    A + L  M  +G+ P   +YN 
Sbjct: 563 IKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 622

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR-QGRMHDSELILWRMIEK 444
           +I    R  N+  A  L  +M   G  PD +TY ++    CR  G + ++   L  M+ K
Sbjct: 623 VIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNK 682

Query: 445 GLNPDRSTYTTLING 459
           G  P+ S++  L  G
Sbjct: 683 GFMPEFSSFRMLAEG 697



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 251/484 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K+   +    EM  +G+ PD VT NTLI A CR   +  A  ++  MS  G
Sbjct: 168 LLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHG 227

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ G  ++G  + A  V  +M++ G SP   T N L+   C+   + +A 
Sbjct: 228 VAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDAL 287

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +    G  PD V+++T +    +NG +  AL     M   G  PD   Y  +IN  
Sbjct: 288 GYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 347

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG + EA  + ++M+++GC+ D  T+NT++  L     L EA DL  E+  +G+ PD 
Sbjct: 348 SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDV 407

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF  LI+  CK G+ +  + LF+ M      PD VTYN LID  C +G++  A  L  +
Sbjct: 408 YTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNE 467

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S     + ++Y  +I+  C    + EA  ++ +M  +GI  + V+ NT+I G C++  
Sbjct: 468 MESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKR 527

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E + +MV EG+ P++I+YN+++  + ++ N+ KA  ++  M   G   DV+TY  
Sbjct: 528 IDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ GR   +  +L  M  KG+ P    Y  +I     +NNL++A     EM + G
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVG 647

Query: 481 FVPD 484
             PD
Sbjct: 648 EPPD 651



 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 140/430 (32%), Positives = 238/430 (55%), Gaps = 1/430 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +++ A  ++ +    G  PD VTYNT ++  C+ G +  A ++M+ M  +G
Sbjct: 273 LINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEG 332

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTYN++IN L K G  D AK ++++M+  G  PDT T+NTL+V    +  + EA 
Sbjct: 333 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEAL 392

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E++ +G++PD+ +F+ LI    + G     +  F EMKS+G  PD V Y I+I+  
Sbjct: 393 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHL 452

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  AL + +EM   GC    VTYNTI++ LC+   + EA+++F++M  +G+    
Sbjct: 453 CSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSA 512

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI G CK   ++ A  L + M ++ ++P+ +TYN+++  +CK G ++KA  +   
Sbjct: 513 VTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILET 572

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +     + ++YG LING C  G    A +L   M  KGI+PT  + N +I+   R  +
Sbjct: 573 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNN 632

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN-MDKAFALVSKMENQGLVPDVITYN 419
              A     +M   G  PD+++Y  +     R    + +AF  + +M N+G +P+  ++ 
Sbjct: 633 LRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFR 692

Query: 420 VILTGFCRQG 429
           ++  G    G
Sbjct: 693 MLAEGLLNLG 702



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 235/474 (49%), Gaps = 3/474 (0%)

Query: 15  KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLING 74
           +M    + ++   P +  Y  ++      G  +    L+  M  +G +       S +  
Sbjct: 74  RMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVES 133

Query: 75  LCKKGRCDRAKEVLDEMLQ---MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
             +  R D A +++   L     G+  DT  +N LL        +   E ++ EM+ RG+
Sbjct: 134 YARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGI 193

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            PD+V+ +TLI    R  Q+  A++   EM S G+ PD   +T ++ G+   G +  AL+
Sbjct: 194 QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALR 253

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           ++ +M+E GC    VT N ++NG C+   + +A     + +  G  PD  T+ T +HG C
Sbjct: 254 VKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLC 313

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           ++G+++ AL + D+M Q+   PD+ TYNT+I+   K GE+++A  +   M+ R   P+  
Sbjct: 314 QNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 373

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           ++  LI    S   + EA  L  E+  KG+ P + + N +I   C+ GD         +M
Sbjct: 374 TFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 433

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            S G  PD ++YN LI+       +  A  L+++ME+ G     +TYN I+   C++ R+
Sbjct: 434 KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRI 493

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            ++E +  +M  +G++    T+ TLI+G      + +A    ++M++ G  P++
Sbjct: 494 EEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNN 547



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 148/271 (54%), Gaps = 1/271 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   K+ +A   L EME  G    TVTYNT+I+A C++  +EEA ++ + M  +G
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     T+N+LI+GLCK  R D A E++++M++ GL P+  TYN++L   C++ N+ +A 
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAA 567

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M+  G   D+V++ TLI    + G+   AL   R M+  G+ P    Y  +I   
Sbjct: 568 DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 627

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGVFPD 239
            R   + +AL +  EM E G   D +TY  +   LCR    + EA D   EM+ +G  P+
Sbjct: 628 FRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPE 687

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           F +F  L  G    G  +  ++  +++ +K+
Sbjct: 688 FSSFRMLAEGLLNLGMDDYLISAIELIIEKA 718


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  294 bits (752), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 255/483 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN  CK   +  A+++  ++ Q G++PDT TY +LI  +CR   ++ A+++   M  KG
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +LI+GLC+ GR + A ++  +M +    P   TY  L+          EA 
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G  P++ +++ LI    +  ++D A     EM   GL+P  V Y  +I+GY
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A ++ D M    C  +  TYN ++ GLC+ + + +A  L N+MLER + P  
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LIHG CK  ++  A  L  +M +  + PD  TY+  ID  CK G +E+A  L+  
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + ++ +  N + Y  LI+GYC +G +  A+ L   M+     P   + N +I+G C+   
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   ++KM++ GV P  ++Y  LI   +++   D A  + + M + G  PDV TY  
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            L  +  QG + + + ++ +M E+G+ PD  TYT LI+G+        AF F   M+  G
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679

Query: 481 FVP 483
             P
Sbjct: 680 CKP 682



 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/483 (32%), Positives = 259/483 (53%), Gaps = 6/483 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK++K+D A+  L EM +KG+ P  VTYN LI+ YC+EG +++AF++++ M    
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN LI GLCKK +  +A  +L++ML+  LSP   TYN+L+   C+  ++  A 
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+  G+ PD  ++S  I    + G+++ A   F  +K+ G+  + V+YT +I+GY
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A  + + ML   C+ +  TYN ++ GLC+ K + EA  L  +ML  GV P  
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI    KDG  + AL +F+ M     +PD+ TY   +  +   G +E+ + + A 
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I P+ ++Y +LI+GY  +G    AF     MV  G KP+L   + +IK       
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE-- 697

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++  E  S++   G+D  S   +  I    +    + A  L  KM   G   DV  Y  
Sbjct: 698 -NRMKETRSEI---GIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGA 753

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+Q R+ +++ ++  M E+G++P    Y +L++         EA R  D M++ G
Sbjct: 754 LIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 813

Query: 481 FVP 483
            +P
Sbjct: 814 LLP 816



 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 156/474 (32%), Positives = 251/474 (52%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID  K    E+    + P+  T+N ++N YC+ G + EA    + +   GL P  FTY S
Sbjct: 175 IDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTS 234

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI G C+    D A EV   M Q G   +  +Y  L+   C    ++EA ++F +M+   
Sbjct: 235 LILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P + +++ LI   S +G+   AL  F EMK  G  P+   YT++I+G C+   + EA 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           KM  EM EKG +  VVTYN +++G C+  M+ +A ++ + M      P+  T+  LI G 
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK   ++KA+ L + M ++ + P ++TYN+LI G CKV ++E A +L + M    + P+ 
Sbjct: 415 CKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +Y + I+  C  G V EA  L+  +  KG+K   V    +I GYC+ G    A   L +
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+++   P+S +YN LI G  +E+ M +A +LV+KM   G+ P V+TY +++    + G 
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              +  +   M+  G  PD  TYT  ++ + SQ  L+E      +M + G +PD
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648



 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 247/457 (54%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    YNT++ +  +   ++E   +   +    + P ++T+N+++NG CK G    A+  
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +++Q GL PDT TY +L++  CR + +  A E+F  M ++G   + VS++ LI     
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+++ AL  F +M      P    YT++I     +G  +EAL + +EM EKGC  +V T
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHT 336

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y  +++GLC+   + EA  + +EM E+G+ P   T+  LI G+CK+G ++ A  + D+M 
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
             S  P+  TYN LI G CK  ++ KA  L   M+ RK+SP+ I+Y  LI+G C +  + 
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A+RL   M   G+ P   + +  I   C+ G   +A      + ++GV  + + Y  LI
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+ +   +D A++L+ +M N   +P+  TYNV++ G C++ +M ++  ++ +M+  G+ 
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK 576

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P   TYT LI   +       A +  + M+  G+ PD
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 246/514 (47%), Gaps = 29/514 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  +I+ A     +M +    P   TY  LI A    G   EA  L N M  KG
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY  LI+GLCK+ + D A+++L EM + GL P   TYN L+   C++  + +A 
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI   M      P+  +++ LI    +  ++ +A+    +M    L P  + Y  +I+G 
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A ++   M E G V D  TY+  ++ LC+   + EA  LF+ +  +GV  + 
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T LI G+CK G ++ A +L + M   +  P+  TYN LI+G CK  +M++A+ L A 
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++  + P  ++Y ILI      G    A +++  MV  G +P + +    +  Y   G 
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             + D+ ++KM  EG+ PD ++Y  LI+G+ R     +AF  +  M + G  P +   ++
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689

Query: 421 ILTGFCRQGRMHD--SEL---------------------------ILWRMIEKGLNPDRS 451
           ++     + RM +  SE+                           +  +M+E G   D S
Sbjct: 690 LIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVS 749

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            Y  LI G   Q  L+EA      M +RG  P +
Sbjct: 750 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSE 783



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 228/476 (47%), Gaps = 10/476 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK + ++SA   L  M + G+ PD  TY+  I+  C+EG +EEA  L +S+  KG
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y +LI+G CK G+ D A  +L+ ML     P++ TYN L+   C+++ M EA 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   GV P +V+++ LIG   ++G  D AL  F  M S G  PD   YT  ++ Y
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + E   +  +M E+G + D+VTY  +++G  R  +   A D    M++ G  P  
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID--GFCKVGEMEKANKLW 298
           Y  + LI     +  M +        T+  I  D V+    +D     K  E E A KL+
Sbjct: 685 YIVSILIKNLSHENRMKE--------TRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLF 736

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+    + +   YG LI G+C    + EA  L + M  +G+ P+    N+++   C+ 
Sbjct: 737 EKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKL 796

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  ++A   +  MV  G+ P   SY  L+ G   E + +KA A+   + + G   D + +
Sbjct: 797 GVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAW 856

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            V++ G  ++  + +   ++  M EK            +    + N+ K A   H+
Sbjct: 857 KVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGALEDHE 912



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 169/382 (44%), Gaps = 93/382 (24%)

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEAD--------------------DLFNEMLERGV 236
           L  G   +V +Y+++LN L RA++L  A+                    ++F +M   G 
Sbjct: 93  LRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGE 152

Query: 237 F--------------------------------------PDFYTFTTLIHGHCKDGN--- 255
           F                                      P+ YTF  +++G+CK GN   
Sbjct: 153 FKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVE 212

Query: 256 --------------------------------MNKALNLFDIMTQKSIKPDIVTYNTLID 283
                                           ++ A  +F IM QK  + + V+Y  LI 
Sbjct: 213 AELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIH 272

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           G C+ G + +A KL+ADM      P   +Y +LI      G   EA  L+ EM  KG +P
Sbjct: 273 GLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEP 332

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            + +   +I G C+     +A + LS+M  +G+ P  ++YN LI+G+ +E  +D AF ++
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
             ME+    P+  TYN ++ G C++ ++H +  +L +M+E+ L+P   TY +LI+G    
Sbjct: 393 DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452

Query: 464 NNLKEAFRFHDEMLQRGFVPDD 485
           N+L+ A+R    M + G VPD 
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQ 474


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  294 bits (752), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 278/484 (57%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ + D A     EM  +G+ P+ VTY  LI+A C+ G +E+A  L + M  KG
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+ YNSLING CK+G  DRA+ +L  M++ GL+P  A+Y+ L+   CR  ++S   
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM+ RG+A +  +F+ LI  F ++ ++D A   F +M  + ++P+ V + ++I GY
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A ++ D+M+E G   D  TY ++++GLC    +++A++   ++       + 
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++ T L++G  ++G   +  +L+D M  + +K D+V++  ++    K  + EK+  L+ +
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+ I Y  +I+      ++ +A   W +MV  G  P  V+   +I   C+SG 
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A+    +M++  V P+  +YN  ++ F  E +M+KA  L S M  QG +  ++++N+
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 762

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ ++  ++ ++ E G +PD  +Y+T+I+      ++ +AF   +EML +G
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 481 FVPD 484
             PD
Sbjct: 823 LKPD 826



 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 159/513 (30%), Positives = 253/513 (49%), Gaps = 35/513 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCRE----------------G 44
           ++  LCK+ ++  A      M   GV  D VTY TL+  +CR                 G
Sbjct: 239 LMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLG 298

Query: 45  FL-------------------EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           F+                   EEAF L   +   G+ P VF YN+LI+ LCK  R D A 
Sbjct: 299 FVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDAD 358

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  EM   GL P+  TY  L+   C++  + +A  +F +M  +G+   +  +++LI  +
Sbjct: 359 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G LDRA      M   GL P    Y+ +I G CRNG +   +++  EM E+G   + 
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 478

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T+  ++NG C+ K + EA  LF++M++  V P+  TF  +I G+C  GN+ KA  L+D 
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +  +KPD  TY +LI G C    + KAN+  AD+ +     N  S   L+ G+   G 
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
            TE + LW EM  +G+K  LVS   I+    +  D  K+     +M  +GV PD I Y  
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+   +EENM +A     +M   G  P+ +T+ V++   C+ G +  +EL+   M+   
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + P++ TY   ++   ++ ++++A   H  MLQ
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ 751



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 268/483 (55%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A C+   +D A+  +  ME +GV    V YN L+   C+   ++EA ++ N M   G+
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
                TY +L+ G C+    + A  +  +M+++G  P  A  + ++ E  +KE + EA  
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           + C++   G+ P++ +++ LI    +N + D A   F+EM   GL P+ V Y I+I+  C
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G + +AL + D+M +KG  + V  YN+++NG C+   L  A  L + M++ G+ P   
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           +++ LI G C++G+++  + L   M ++ I  +  T+  LI+GFCK  +M++A +L+  M
Sbjct: 445 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           I   + PN +++ ++I GYC +G++ +AF+L+ +MV  G+KP   +  ++I G C +   
Sbjct: 505 IDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 564

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           SKA+EF++ + +     ++ S   L+ GF RE    + + L  +M  +G+  D++++ +I
Sbjct: 565 SKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTII 624

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +    +Q     S ++   M E+G+ PD   YT +I+    + N+ +A    D+M+  G+
Sbjct: 625 VYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGY 684

Query: 482 VPD 484
            P+
Sbjct: 685 SPN 687



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 254/484 (52%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +L K  +   A+    +M Q GV+ D   Y   I AYC    L+ A  L+  M  +G+K 
Sbjct: 172 SLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKA 231

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
               YN L+ GLCK  R   A EV + M+ +G++ D  TY TL+   CR E +  A  I 
Sbjct: 232 SAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRIT 291

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M R G  P   + S +I    +   ++ A     ++   G+VP+   Y  +I+  C+N
Sbjct: 292 HDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
               +A ++  EM  +G   + VTY  +++ LC+  M+ +A  LF++M ++G+    Y +
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +LI+G+CK G++++A  L   M ++ + P   +Y+ LI G C+ G++    +L  +M  
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 471

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R I+ N  ++  LING+C    + EA RL+ +M+   + P  V+ N +I+GYC  G+  K
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A +   +MV  G+ PD+ +Y +LI+G      + KA   V+ +EN   V +  +   +L 
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GF R+GR  ++  +   M  +G+  D  ++T ++   + Q++ +++     EM ++G  P
Sbjct: 592 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651

Query: 484 DDAF 487
           DD F
Sbjct: 652 DDIF 655



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 213/389 (54%), Gaps = 1/389 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CKD K+D A     +M    V P+ VT+N +I  YC  G + +AFQL + M   G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TY SLI+GLC      +A E + ++       +  +   LL    R+   +E  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 603

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+ RGV  D+VSF+ ++    +    +++ + FREMK  G+ PD++ YT +I+  
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   +++AL   D+M+  G   + VT+  ++N LC++  L  A+ L  EML   V P+ 
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+   +     +G+M KA +L   M Q  +   IV++N LI G CK G++++A  L + 
Sbjct: 724 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSK 782

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +     SP+ ISY  +I+  C MG + +AF LW EM+ KG+KP +V+ N  I+     G+
Sbjct: 783 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGE 842

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLING 389
           + KA    + M+  GV P+  +Y  L++G
Sbjct: 843 SDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 210/399 (52%)

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           VL   L  G++ +  T + +L    +    + A ++F +M + GV  D   ++  I  + 
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
            +  LD A      M+S G+    V Y +++ G C+N  V EA+++++ M+  G   D V
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TY T++ G CR + L  A  + ++M+  G  P     + +I    K   + +A +L   +
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               + P++  YN LID  CK    + A++L+ +M  R + PN ++Y ILI+  C  G +
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A  L+ +M  KGIK T+   N++I GYC+ G   +A   LS MV EG+ P + SY+ L
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G  R  ++     L  +M  +G+  +  T+  ++ GFC+  +M ++  +  +MI+  +
Sbjct: 450 IAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            P+  T+  +I G+    N+++AF+ +D+M++ G  PD+
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 210/413 (50%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+    +T + ++  L K  +   A+++ D+MLQ G+  D   Y   +   C   N+  A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +   M   GV    V ++ L+    +N ++  A+     M + G+  D V Y  ++ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR   +  AL++  +M+  G V      + +++ L + +++ EA  L  ++ + G+ P+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            + +  LI   CK+   + A  LF  M  + ++P+ VTY  LI   CK G +E A  L+ 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  + I      Y  LINGYC  G +  A  L   MV +G+ PT  S + +I G CR+G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D S   E   +M   G+  ++ ++  LINGF +++ MD+A  L  KM +  ++P+ +T+N
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           V++ G+C  G +  +  +  +M+E GL PD  TY +LI+G    + + +A  F
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  294 bits (752), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 259/457 (56%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +N ++ +  +      A  L   M  KG++P +FT N LIN  C  G+   +  V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  P+T T NTL+   C K  + ++     ++  +G   D VS++TL+    +
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+   AL   R ++     P+ V+Y  II+G C++  V EA  +  EM  +G   +V+T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T++ G C A  L EA  L NEM+ + + P+ YT+T L+   CK+G + +A NL  +MT
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ +KP++V+YNTL+DG+C +GE++ A +++  M+ + ++PN  SY I+I+  C    V 
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L  E++ K + P  V+ +++I G+C+ G  + A + L +M   G   D ++Y +L+
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   + +N+DKA AL  KM+ +G+ P+  TY  ++ G C+ GR  +++ +   ++ KG  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  TY  +I+G   +  L EA     +M + G +PD
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPD 464



 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 261/482 (54%), Gaps = 5/482 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   ++  +   L ++ + G  P+T+T NTL+   C +G ++++    + +  +G
Sbjct: 51  LINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQG 110

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +L+NGLCK G    A ++L  +      P+   YNT++   C+ + ++EA 
Sbjct: 111 FQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAY 170

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM  RG+ P+++++STLI  F   GQL  A     EM    + P+   YTI+++  
Sbjct: 171 DLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDAL 230

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  +   M ++G   +VV+YNT+++G C    +  A  +F+ M+++GV P+ 
Sbjct: 231 CKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNV 290

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y++  +I   CK   +++A+NL   +  K++ P+ VTY++LIDGFCK+G +  A  L  +
Sbjct: 291 YSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKE 350

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R    + ++Y  L++  C   ++ +A  L+ +M  +GI+P   +   +I G C+ G 
Sbjct: 351 MYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGR 410

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +    ++ +G   +  +YN +I+G  +E  +D+A A+ SKME  G +PD +T+ +
Sbjct: 411 HKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEI 470

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+     + +   +E +L  MI K L   R       +G  S N   +A +   EM+ +G
Sbjct: 471 IIRSLFEKDQNDKAEKLLHEMIAKDLLRFRD-----FHGERSPNENDKAEKLLHEMIAKG 525

Query: 481 FV 482
            +
Sbjct: 526 LL 527



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 218/394 (55%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML +  +P    +N ++    + ++   A  +F +M  +G+ PD+ + + LI  F   GQ
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +  +     ++   G  P+ +    ++ G C  G V ++L   D+++ +G  MD V+Y T
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +LNGLC+      A  L   + +R   P+   + T+I G CKD  +N+A +L+  M  + 
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I P+++TY+TLI GFC  G++ +A  L  +MI + I+PN  +Y IL++  C  G V EA 
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAK 240

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L   M  +G+KP +VS NT++ GYC  G+   A +    MV +GV+P+  SYN +I+  
Sbjct: 241 NLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            + + +D+A  L+ ++ ++ +VP+ +TY+ ++ GFC+ GR+  +  +L  M  +G   D 
Sbjct: 301 CKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADV 360

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TYT+L++      NL +A     +M +RG  P+
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPN 394


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  293 bits (751), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 259/485 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K++           +GV  D V ++++++AY R G L +A ++   M  +G
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY+ LINGLC+ GR   A  V  ++L+ GL P   TY++L+   C+ EN+ +  
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++  M R+G  PD+V  S LI   SR G +D AL +F +    GL  +N L+  +I+G 
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGC 495

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R     + LKM   M     + DVVTY  ++ GL     L EA  LF ++L++G  PD 
Sbjct: 496 FRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDH 555

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TLI G CK  +    L +F +M    I PDI  YN LI+ F + G +E   +L  +
Sbjct: 556 IIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLRE 615

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +I   + P+ ++Y  +I GYCS+   ++A +L+  +     +P  ++   +I  YC+ G 
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A    S M+  G +P+ ++Y+ LI+G+ + EN + AF L  KM    + P++++Y++
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G M ++ L     I + L PD   Y  LI G+     L EA   +D ML  G
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNG 795

Query: 481 FVPDD 485
            +PDD
Sbjct: 796 IMPDD 800



 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 262/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC  ++I  A  F   M + G  P+ VT++TLIN YC+E  L+EAF L N M  KG
Sbjct: 246 ILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKG 305

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +  Y+ LINGL + G+ +    +    L  G+  D   +++++    R  ++ +A 
Sbjct: 306 IVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAI 365

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++  M + G++P++V++S LI    RNG++  A   F ++   GL P  + Y+ +I+G+
Sbjct: 366 EVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGF 425

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  + +   +   ML KG V DVV  + ++NGL R  M+ EA   F + ++RG+  + 
Sbjct: 426 CKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNN 485

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y F  LI G  +       L ++ +M    + PD+VTY  L+ G  + G +++A  L+  
Sbjct: 486 YLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQ 545

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ +  SP++I Y  LI+G+C         +++  M   GI P +   N +I  + R G 
Sbjct: 546 LLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGC 605

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E L +++  G++PD ++YNT+I G+   +   KA  L   ++     P+ IT+ +
Sbjct: 606 VENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++  +C+ GRM D+ LI   M+E+G  P+  TY+ LI+G+    N + AF  +++ML   
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 481 FVPD 484
             P+
Sbjct: 726 VSPN 729



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 250/527 (47%), Gaps = 67/527 (12%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK---------------------- 62
           G  P TV Y+ L++ YCR G ++ A      MS  G+                       
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 63  --------PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
                    G+  Y  + N   K+G  ++       +++ GL P     N +L   C   
Sbjct: 195 LENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGN 254

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            +  A + F  M R G +P++V+FSTLI ++ +  +LD A   +  M   G+VPD V+Y+
Sbjct: 255 QIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+ING  R G + E   +    L +G  MDVV +++I++   R   L +A +++  ML+ 
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G+ P+  T++ LI+G C++G + +A  +F  + ++ ++P ++TY++LIDGFCK   +   
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK------------ 342
             L+  M+ +   P+ +   +LING    G + EA R +++ V +G+             
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 343 -----------------------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
                                  P +V+   ++KG    G   +A     +++ +G  PD
Sbjct: 495 CFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD 554

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I Y TLI+GF ++ +      +   M++ G+ PD+  YNV++  F R+G + +   +L 
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            +I+ GL PD  TY T+I G+ S     +A +   E+L+ G    +A
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNA 660



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 220/422 (52%), Gaps = 37/422 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC++ ++  A     ++ ++G+ P  +TY++LI+ +C+   L + F L   M  KG
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS----------------------- 97
             P V   + LINGL ++G  D A     + ++ GL+                       
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505

Query: 98  ------------PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                       PD  TY  L+     +  + EA  +F ++ ++G +PD + + TLI  F
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +       L  F+ M+S G+ PD  +Y ++IN + R G V   L++  E+++ G   D+
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERG-VFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VTYNT++ G C  K+ ++A  LF E+L+ G   P+  TFT LI  +CKDG M+ A+ +F 
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFS 684

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M ++  +P+I+TY+ LIDG+ K    E A +L+  M+  ++SPN +SY ILI+G C  G
Sbjct: 685 SMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKG 744

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA   +   +G+ + P +++   +I+GYC+ G  ++A      M+  G+ PD +   
Sbjct: 745 LMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQK 804

Query: 385 TL 386
            L
Sbjct: 805 AL 806


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/461 (33%), Positives = 256/461 (55%), Gaps = 3/461 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++++  K+ + D A M L EME +G     + VT+N +I+   REG LE A +L++SM  
Sbjct: 243 LLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRL 302

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
              K   FTYN LI  L ++G   +A+ +  EM   G+ P   TYN ++    + E    
Sbjct: 303 SK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEA 361

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A+  F EM   G+ PD++++++L+  + + G L  AL    +++ AGL P  + Y  +I+
Sbjct: 362 AQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 421

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYCR G + EA ++++EM+E+GC  DV TY  ++NG  + + L  A + F+EML +G+ P
Sbjct: 422 GYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQP 481

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D + + T I       +   A  L ++M  K I PD VTYN +IDG CK G ++ A +L 
Sbjct: 482 DCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLK 541

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+S  + P+ I+Y  LI+ +C  G + EA +L   MV  G++P++V+   ++   CR 
Sbjct: 542 TKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRR 601

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+   A  +  KM+  G++P+ I+YN LI+          AF    +M  +GL P+  TY
Sbjct: 602 GNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTY 661

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            +++ G CR+G   D+  + + M + G+ PD  T+  L  G
Sbjct: 662 TLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 702



 Score =  284 bits (726), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 158/477 (33%), Positives = 262/477 (54%), Gaps = 3/477 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM--SGKGLKPGVFT 67
           + D  +    EM Q  V P  VTYNTL++++ +EG  +EA  L+  M   G G      T
Sbjct: 217 RWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVT 276

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           +N +I+ L ++G  + A +++D M ++     + TYN L+     +  + +AE +  EM 
Sbjct: 277 FNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEALQMEME 335

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G+ P +V+++ +I    +  Q + A + F EM++ GL+PD + Y  ++N YC+ G + 
Sbjct: 336 NEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLK 395

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EAL +  ++   G    V+TYNT+++G CR   L EA  L  EM+E+G FPD  T+T L+
Sbjct: 396 EALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILM 455

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +G  K  N+  A   FD M  K ++PD   YNT I     +     A +L   M+ + I 
Sbjct: 456 NGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIY 515

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ ++Y ++I+G C  G++ +A RL  +MV  G++P  ++   +I  +C  G   +A + 
Sbjct: 516 PDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKL 575

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           L+ MVS+G+ P  ++Y  L++   R  N+  A+    KM + G+ P+ ITYNV++   C 
Sbjct: 576 LNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCM 635

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GR   +      M+E+GL P++ TYT LI+G+  + N  +A R + EM Q G  PD
Sbjct: 636 TGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 692



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 137/406 (33%), Positives = 211/406 (51%), Gaps = 1/406 (0%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
            + TYN LI A    GF+ +A  L   M  +G+ P V TYN++I+GL K  + + A+   
Sbjct: 307 SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKF 366

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            EM  MGL PD  TYN+LL   C+  N+ EA  +  ++ R G+AP +++++TLI  + R 
Sbjct: 367 AEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 426

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L  A     EM   G  PD   YTI++NG  +   +  A +  DEML KG   D   Y
Sbjct: 427 GDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           NT +           A  L   M+ +G++PD  T+  +I G CK GN+  A  L   M  
Sbjct: 487 NTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVS 546

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             ++PD +TY  LI   C+ G + +A KL   M+S  + P+ ++Y IL++  C  G++  
Sbjct: 547 DGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYS 606

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A+  + +M+  GI+P  ++ N +I   C +G    A     +M+  G+ P+  +Y  LI+
Sbjct: 607 AYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLID 666

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G  RE N   A  L  +M   G+ PD  T+N +  GF  +G M+ +
Sbjct: 667 GNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF-DEGHMYHA 711



 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 236/473 (49%), Gaps = 41/473 (8%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           AF+L+      G+ P V   N ++  L    R D  + V  EMLQ+ + P   TYNTLL 
Sbjct: 189 AFRLVTC---HGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLD 245

Query: 109 ESCRKENMSEAEEIFCEMSRRG--VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
              ++    EA  +  EM  +G   + + V+F+ +I   +R G L+ A+     M+ +  
Sbjct: 246 SFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKK 305

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
              +  Y  +I      GFV +A  ++ EM  +G +  VVTYN I++GL + +    A  
Sbjct: 306 A-SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQV 364

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
            F EM   G+ PD  T+ +L++ +CK GN+ +AL L   + +  + P ++TYNTLIDG+C
Sbjct: 365 KFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 424

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGY-------------------------- 320
           ++G++ +A +L  +M+ +   P+  +Y IL+NG                           
Sbjct: 425 RLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCF 484

Query: 321 ---------CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
                     ++     AF+L   M+ KGI P  V+ N II G C++G+   A    +KM
Sbjct: 485 AYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKM 544

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           VS+G+ PD I+Y  LI+       + +A  L++ M + GL P V+TY +++   CR+G +
Sbjct: 545 VSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNL 604

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + +     +M++ G+ P+  TY  LI+          AFR   EML+RG  P+
Sbjct: 605 YSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPN 657



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 166/330 (50%), Gaps = 1/330 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK   +  A   L ++ + G+ P  +TYNTLI+ YCR G L EA +L   M  +G
Sbjct: 384 LLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQG 443

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  L+NG  K      A+E  DEML  GL PD   YNT +       +   A 
Sbjct: 444 CFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAF 503

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M  +G+ PD V+++ +I    + G L  A     +M S GL PD + YT +I+ +
Sbjct: 504 QLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAH 563

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA K+ + M+  G    VVTY  +++  CR   L  A   F +ML+ G+ P+ 
Sbjct: 564 CERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNE 623

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LIH  C  G    A   F  M ++ + P+  TY  LIDG C+ G    A +L+ +
Sbjct: 624 ITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFE 683

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAF 330
           M    I P+Y ++  L  G+   GH+  A 
Sbjct: 684 MHQNGIPPDYCTHNALFKGF-DEGHMYHAI 712



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 36/261 (13%)

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L  F ++T   + PD+   N ++         +    ++ +M+  ++ P  ++Y  L++ 
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 320 YCSMGHVTEAFRLWYEMVGKG------------------------------------IKP 343
           +   G   EA  L  EM  +G                                     K 
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKA 306

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           +  + N +I      G   KA+    +M +EG+ P  ++YN +I+G ++ E  + A    
Sbjct: 307 SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKF 366

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           ++M   GL+PDVITYN +L  +C+ G + ++  +L  +   GL P   TY TLI+G+   
Sbjct: 367 AEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 426

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
            +L EA R  +EM+++G  PD
Sbjct: 427 GDLAEARRLKEEMVEQGCFPD 447


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 266/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K +K D       +M+  G+  +  TY+ LIN +CR   L  A  ++  M   G
Sbjct: 87  LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T NSL+NG C   R   A  ++ +M++MG  PD+ T+NTL+    R    SEA 
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G  PD+V++  ++    + G +D AL   ++M+   + P  V+Y  II+  
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V +AL +  EM  KG   +VVTYN+++  LC     ++A  L ++M+ER + P+ 
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ LI    K+G + +A  L+D M ++SI PDI TY++LI+GFC    +++A  ++  
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS+   PN ++Y  LI G+C    V E   L+ EM  +G+    V+  T+I G+ ++ +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +MVS+GV PD ++Y+ L++G      ++ A  +   ++   + PD+ TYN+
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ P+  TYTT+++G   +   +EA     EM + G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566

Query: 481 FVPD 484
            +PD
Sbjct: 567 PLPD 570



 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 262/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++  A   L +M + G  PD VT N+L+N +C    + +A  L+  M   G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P  FT+N+LI+GL +  R   A  ++D M+  G  PD  TY  ++   C++ ++  A 
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +  + P +V ++T+I        ++ AL  F EM + G+ P+ V Y  +I   
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++  +M+E+    +VVT++ +++   +   L EA+ L++EM++R + PD 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI+G C    +++A ++F++M  K   P++VTYNTLI GFCK   +++  +L+ +
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  N ++Y  LI+G+        A  ++ +MV  G+ P +++ + ++ G C +G 
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      +    ++PD  +YN +I G  +   ++  + L   +  +G+ P+V+TY  
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++GFCR+G   +++ +   M E+G  PD  TY TLI  H+   +   +     EM    
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601

Query: 481 FVPD 484
           FV D
Sbjct: 602 FVGD 605



 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 252/477 (52%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D K+D A     +M +   +P  V ++ L++A  +    +    L   M   G+   ++T
Sbjct: 59  DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y+ LIN  C++ +   A  VL +M+++G  PD  T N+LL   C    +S+A  +  +M 
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G  PD  +F+TLI    R+ +   A+     M   G  PD V Y I++NG C+ G + 
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            AL +  +M +      VV YNTI++ LC  K + +A +LF EM  +G+ P+  T+ +LI
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
              C  G  + A  L   M ++ I P++VT++ LID F K G++ +A KL+ +MI R I 
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+  +Y  LING+C    + EA  ++  M+ K   P +V+ NT+IKG+C++    +  E 
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M   G+  ++++Y TLI+GF +    D A  +  +M + G++PD++TY+++L G C 
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G++  + ++   +    + PD  TY  +I G      +++ +     +  +G  P+
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 146/436 (33%), Positives = 237/436 (54%), Gaps = 1/436 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L + ++   A   +  M  KG  PD VTY  ++N  C+ G ++ A  L+  M    
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++PGV  YN++I+ LC     + A  +  EM   G+ P+  TYN+L+   C     S+A 
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + P++V+FS LI  F + G+L  A   + EM    + PD   Y+ +ING+
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA  M + M+ K C  +VVTYNT++ G C+AK + E  +LF EM +RG+  + 
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLIHG  +    + A  +F  M    + PDI+TY+ L+DG C  G++E A  ++  
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+ P+  +Y I+I G C  G V + + L+  +  KG+KP +V+  T++ G+CR G 
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +AD    +M  EG  PDS +YNTLI   +R+ +   +  L+ +M +   V D  T  +
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGL 611

Query: 421 ILTGFCRQGRMHDSEL 436
           + T     GR+  S L
Sbjct: 612 V-TNMLHDGRLDKSFL 626



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 206/380 (54%)

Query: 103 YNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
           Y  + +       + +A  +F +M +    P IV FS L+   ++  + D  +    +M+
Sbjct: 49  YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
           + G+  +   Y+I+IN +CR   +  AL +  +M++ G   D+VT N++LNG C    ++
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           +A  L  +M+E G  PD +TF TLIHG  +    ++A+ L D M  K  +PD+VTY  ++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +G CK G+++ A  L   M   KI P  + Y  +I+  C+  +V +A  L+ EM  KGI+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P +V+ N++I+  C  G  S A   LS M+   ++P+ ++++ LI+ FV+E  + +A  L
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M  + + PD+ TY+ ++ GFC   R+ +++ +   MI K   P+  TY TLI G   
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408

Query: 463 QNNLKEAFRFHDEMLQRGFV 482
              + E      EM QRG V
Sbjct: 409 AKRVDEGMELFREMSQRGLV 428



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y +  +      D  ++ A+NLF  M +    P IV ++ L+    K+ + +    L   
Sbjct: 47  YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  IS N  +Y ILIN +C    ++ A  +  +M+  G +P +V+ N+++ G+C    
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A   + +MV  G  PDS ++NTLI+G  R     +A ALV +M  +G  PD++TY +
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226

Query: 421 ILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++ G C++G + D  L L + +E+G + P    Y T+I+   +  N+ +A     EM  +
Sbjct: 227 VVNGLCKRGDI-DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285

Query: 480 GFVPD 484
           G  P+
Sbjct: 286 GIRPN 290


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 160/433 (36%), Positives = 243/433 (56%), Gaps = 7/433 (1%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M   G  P   TYN+L++GLC  GR   A+ + + M++ G SPD  TYNTLL   C+   
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + EA +IF    +RG  PD+V+++ LI  F +  +LD A    + M S  LVPD V Y  
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA-KMLTEADDLFNEMLER 234
           ++NG C+NG V EA   R  +++KG   +V+TY+T+++GLCR  + ++EA  LF  +L++
Sbjct: 121 LVNGLCKNGRVDEA---RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P+  T+  LI G  K+  +N+A  LF  + +  ++PD +TY   IDG CK G +E A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             +  DM  +   P+ +S+  +ING C    V EA  L   M  KG  P  +S NT+I G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR---EENMDKAFALVSKMENQGL 411
            CR+G   KA     +M+  GV P  ++YN L++G  +   E  + +A  L   M  +G 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           VPDV+TY+ ++ G  + G++ D+  +L  M  KG  P+  TY +LI+G      + EA  
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 472 FHDEMLQRGFVPD 484
               M+++G VPD
Sbjct: 418 LFVAMVEKGCVPD 430



 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 150/443 (33%), Positives = 253/443 (57%), Gaps = 7/443 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G +P+ +TYN L++  C  G + +A  L   M   G  P V TYN+L++G CK G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A ++ D  ++ G  PD  TYN L+   C+ + + EA+ I   M    + PD+V++++
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN-GFVLEALKMRDEMLEK 199
           L+    +NG++D A M   +    G  P+ + Y+ +I+G CR    V EALK+   +L++
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   +V TYN +++GL +   + EA +LF+ +++ G+ PD  T+T  I G CK G +  A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L +   M +K   PD+V++N +I+G CK   +++A  L + M ++  SPN IS+  LI G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS---GDASKADEFLSKMVSEGV 376
            C  G   +A   + EM+ +G+KPT+V+ N ++ G C++   G   +A      M+ +G 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD ++Y+ LI+G  +   +D A  L+  ME +G +P+V TYN +++G C   ++ ++  
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 437 ILWRMIEKGLNPDRSTYTTLING 459
           +   M+EKG  PD  TY T+I+ 
Sbjct: 418 LFVAMVEKGCVPDTITYGTIISA 440



 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 145/393 (36%), Positives = 229/393 (58%), Gaps = 7/393 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  ++D A        ++G  PD VTYN LIN +C+   L+EA +++  M  + 
Sbjct: 51  LLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN 110

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK-ENMSEA 119
           L P V TYNSL+NGLCK GR D A+ ++   +  G SP+  TY+TL+   CR+   +SEA
Sbjct: 111 LVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEA 167

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++F  + ++G  P++ +++ LI    +  +++ A   F  +   GL PD + YT+ I+G
Sbjct: 168 LKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG 227

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G V +AL M  +M EKGCV DVV++N ++NGLC+ K + EA+ L + M  +G  P+
Sbjct: 228 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN 287

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV---GEMEKANK 296
             +F TLI G C+ G   KA+  F  M ++ +KP +VTYN L+DG CK    G +++A  
Sbjct: 288 AISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT 347

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+  MI +   P+ ++Y  LI+G    G + +A RL   M  KG  P + + N++I G C
Sbjct: 348 LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 407

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
                 +A E    MV +G  PD+I+Y T+I+ 
Sbjct: 408 GLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/484 (32%), Positives = 263/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +D A+ FL +M  KGV P+  TYN LI  Y   G  +EA ++   M  + 
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 319

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+N L+  LCK G+   A++V D M   G +PD  +YN +L     K  + +  
Sbjct: 320 ILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   G+AP I +F+ LI  ++  G LD+A++ F EM+  G+ P+ + YT +I   
Sbjct: 380 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAAL 439

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A++  ++M+++G   D   Y+ ++ G C    L +A +L +E++  G+  D 
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F+++I+  CK G +  A N+FD+     + P  V Y+ L+DG+C VG+MEKA +++  
Sbjct: 500 VLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I PN + YG L+NGYC +G + E   L+ EM+ KGIKP+ +  N II G   +G 
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M   G+  +  +Y+ ++ G  +    D+A  L  ++    +  D+IT N 
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 679

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  +  R+ +++ +   +   GL P   TY+ +I   + +  ++EA      M   G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 481 FVPD 484
             PD
Sbjct: 740 CEPD 743



 Score =  274 bits (700), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 249/478 (52%), Gaps = 2/478 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY--PDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++ +LC   K   A   L  M + G    PD V YNT+I+ + +EG + +A  L   M  
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G+ P   TY+S+++ LCK    D+A+  L +M+  G+ P+  TYN L+          E
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F EM R+ + PD+V+F+ L+G   + G++  A   F  M   G  PD   Y I++N
Sbjct: 308 AVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G +++   + D ML  G    + T+N ++       ML +A  +FNEM + GV P
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  T+TT+I   C+ G M+ A+  F+ M  + + PD   Y+ LI GFC  G + KA +L 
Sbjct: 428 NVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 487

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           +++++  +  + + +  +IN  C +G V +A  ++   V  G+ PT V  + ++ GYC  
Sbjct: 488 SEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV 547

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA      MVS G++P+ + Y TL+NG+ +   +D+  +L  +M  +G+ P  I Y
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 607

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           N+I+ G    GR   +++    M E G+  ++ TY+ ++ G        EA     E+
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 665



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 261/480 (54%), Gaps = 3/480 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ-LMNSMSGKGLKPGV 65
           + H+ + A  F  ++ + G+  D +  N L+  +C     +EA   L++     G  P V
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 182

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGL--SPDTATYNTLLVESCRKENMSEAEEIF 123
           F+Y+ L+  LC +G+  +A ++L  M + G   SPD   YNT++    ++ ++++A ++F
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLF 242

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +RG+ PD V++S+++    +   +D+A  + R+M + G++P+N  Y  +I GY   
Sbjct: 243 KEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSST 302

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G   EA+++  EM  +  + DVVT+N ++  LC+   + EA D+F+ M  +G  PD +++
Sbjct: 303 GQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             +++G+   G +    +LFD+M    I P I T+N LI  +   G ++KA  ++ +M  
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRD 422

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             + PN ++Y  +I   C +G + +A   + +M+ +G+ P   + + +I+G+C  G   K
Sbjct: 423 HGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 482

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E +S++++ G+  D + ++++IN   +   +  A  +     N GL P  + Y++++ 
Sbjct: 483 AKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+C  G+M  +  +   M+  G+ P+   Y TL+NG+     + E      EMLQ+G  P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 241/461 (52%), Gaps = 3/461 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P + TY  L++   R    E A      +   GL+  +   N L+ G C+  R D A ++
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 88  L-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV--APDIVSFSTLIGI 144
           L     ++G  PD  +Y+ LL   C +    +A+++   M+  G   +PD+V+++T+I  
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G +++A   F+EM   G+ PD V Y+ +++  C+   + +A     +M+ KG + +
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             TYN ++ G        EA  +F EM  + + PD  TF  L+   CK G + +A ++FD
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K   PD+ +YN +++G+   G +     L+  M+   I+P   ++ +LI  Y + G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A  ++ EM   G+KP +++  T+I   CR G    A E  ++M+ +GV PD  +Y+
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI GF    ++ KA  L+S++ N G+  D++ ++ I+   C+ GR+ D++ I    +  
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           GL+P    Y+ L++G+     +++A R  D M+  G  P+D
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 212/451 (47%), Gaps = 50/451 (11%)

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-------AEEIFCEMSRRGVA 132
           R + A ++LDE+ + G        N  L    R  + +        A  +F   + R   
Sbjct: 44  RPEEAHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGPALAVALFNRAASRAQG 103

Query: 133 PDIVS-----FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           P ++S     ++ L+   +R  + + AL +F ++   GL  D ++   ++ G+C      
Sbjct: 104 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTD 163

Query: 188 EALK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF--PDFYTFT 244
           EAL  +     E GCV DV +Y+ +L  LC      +ADDL   M E G    PD   + 
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYN 223

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           T+I G  K+G++NKA +LF  M Q+ I PD VTY++++   CK   M+KA      M+++
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN  +Y  LI GY S G   EA R++ EM  + I P +V+ N ++   C+ G   +A
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEA 343

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVRE------------------------------- 393
            +    M  +G +PD  SYN ++NG+  +                               
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 403

Query: 394 ----ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                 +DKA  + ++M + G+ P+V+TY  ++   CR G+M D+     +MI++G+ PD
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  Y  LI G  +  +L +A     E++  G
Sbjct: 464 KYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 155/346 (44%), Gaps = 50/346 (14%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE-------ADDLFNEMLERG----- 235
           EA  + DE+  +G  +     N  L  + RA            A  LFN    R      
Sbjct: 47  EAHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGPALAVALFNRAASRAQGPRV 106

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P  +T+  L+    +      AL  F  + +  ++ DI+  N L+ GFC+    ++A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 296 KLW----------ADMISRKI----------------------------SPNYISYGILI 317
            +            D+ S  I                            SP+ ++Y  +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G+   G V +A  L+ EMV +GI P  V+ ++++   C++    KA+ FL +MV++GV 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P++ +YN LI G+       +A  +  +M  Q ++PDV+T+N+++   C+ G++ ++  +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              M  KG NPD  +Y  ++NG+ ++  L +     D ML  G  P
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 151/452 (33%), Positives = 252/452 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N      ++D A   L ++ + G+ P  VT+ TLIN  C+ G   +A +L + M  +G
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG 198

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V+TY ++INGLCK G    A  +L +M + G  P+  TY+T++    +   ++EA 
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEAL 258

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M  +G++PDI ++++LI       Q   A     EM+S  ++PD V + ++++  
Sbjct: 259 DIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTI 318

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  +   M E G   DVVTY++++ G      + EA  LF+ M+ +G  PD 
Sbjct: 319 CKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDV 378

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  LI+G+CK   +++A  LF+ M  + + P+ V+YNTLI G C++G + +A  L+ +
Sbjct: 379 FSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKN 438

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +    PN  +Y IL++G+C  G+  +AFRL+  M     KP LV  N +I   C+SG+
Sbjct: 439 MHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGN 498

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S++  +G+ P++  Y T+ING  +E  +D+A      ME  G  PD I+YNV
Sbjct: 499 LRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNV 558

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           I+ GF        +  ++  M +KG   D  T
Sbjct: 559 IIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 155/481 (32%), Positives = 256/481 (53%), Gaps = 1/481 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG-FLEEAFQLMNSMSGKGLKPG 64
           C    ID A      M  +   P  + +  L++A  + G + +    L   M   GL P 
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           ++T + LIN      R D A  VL +++++GL P   T+ TL+   C+    ++A E+F 
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           +M  RG  PD+ +++T+I    + G+   A    ++M+ AG  P+ V Y+ II+ + ++ 
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V EAL +   M  KG   D+ TYN+++ GLC      EA  L NEM    + PD  TF 
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            L+   CK+G +++A  +   MT+  ++PD+VTY++L+ G+    E+ +A KL+  MI++
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+  SY ILINGYC +  + EA +L+ EM+ +G+ P  VS NT+I G C+ G   +A
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
                 M + G  P+  +Y+ L++GF ++    KAF L   M++    P+++ YN+++  
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C+ G + D+  +   +  KGL P+   YTT+ING   +  L EA      M + G  PD
Sbjct: 493 MCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552

Query: 485 D 485
           +
Sbjct: 553 E 553



 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 251/465 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME  G+ P+  T + LIN +     ++ AF ++  +   GL+P + T+ +LIN LCK G
Sbjct: 123 QMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVG 182

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A E+ D+M+  G  PD  TY T++   C+    + A  +  +M   G  P++V++S
Sbjct: 183 KFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYS 242

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++ +++ AL  F  MK  G+ PD   Y  +I G C      EA  + +EM   
Sbjct: 243 TIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL 302

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + D+VT+N +++ +C+   ++EA  +   M E GV PD  T+++L++G+     + +A
Sbjct: 303 NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEA 362

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             LFD M  K  KPD+ +YN LI+G+CKV  +++A +L+ +MI + ++PN +SY  LI+G
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + EA  L+  M   G  P L + + ++ G+C+ G   KA      M S    P+
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN 482

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            + YN LI+   +  N+  A  L S++  +GL P+   Y  I+ G C++G + ++     
Sbjct: 483 LVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFR 542

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M E G  PD  +Y  +I G +   +   A +   EM  +GF+ D
Sbjct: 543 NMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 257/474 (54%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ++ A+  L EME +GV P+  TY T +   CR   ++ A+  +  +  +G     + +N+
Sbjct: 229 LEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNA 288

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +I+G C  G+  +A EV D M + G  PD  +Y+ L+   C++ ++     +  EM+R G
Sbjct: 289 VIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG 348

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + P++VS+S+L+    R G+++ A   F+ +K  G   D+++Y+I+++G C++  +    
Sbjct: 349 ITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICY 408

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            + ++M+    V D   Y++++   CR + L EA ++F  M+  G+ P+  T T L+HG 
Sbjct: 409 DLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGF 468

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
             +G + +A    D + Q  + P++ TY  +I+G CKV +      ++ADMI R   P+ 
Sbjct: 469 SNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDT 528

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           + Y I+I+G+     + EAFRL+Y+MV +G KP + +  ++I G C      +       
Sbjct: 529 VLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKH 588

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ EG+ PD I Y +LI  + +  NM  A  +  +ME +GL  D   Y  ++ GF +   
Sbjct: 589 MIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLA 648

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M  ++L +  M+ KGL P   TYT LI G+    + K+A   ++ MLQ G  PD
Sbjct: 649 MDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 209/380 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK   + +    L EM + G+ P+ V+Y++L++  CR G +E AF+L   +  +G
Sbjct: 324 LVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQG 383

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K     Y+ +++G C+    +   ++ ++M+     PD   Y++L+   CR   + EA 
Sbjct: 384 FKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEAL 443

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M   G+ P++V+ + L+  FS  G +  A ++  +++  G+VP+   Y +IING 
Sbjct: 444 EVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGL 503

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+     +   +  +M+++G V D V Y+ I++G  +A  L EA  L+ +M++ G  P+ 
Sbjct: 504 CKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNI 563

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+T+LI+G C D  + + + LF  M  + + PD + Y +LI  +CK   M+ A +++ +
Sbjct: 564 FTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFRE 623

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  +S +   Y  LI G+  +  +  A     EM+ KG+ PT+V+   +I GY + GD
Sbjct: 624 METEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGD 683

Query: 361 ASKADEFLSKMVSEGVDPDS 380
             KA    + M+  G+ PD+
Sbjct: 684 EKKAMVMYNSMLQAGIAPDA 703



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 221/449 (49%), Gaps = 35/449 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C D ++  A      M++ G  PD  +Y+ L++  C++G +   + ++  M+  G
Sbjct: 289 VIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG 348

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + +Y+SL++GLC+ GR + A E+   +   G   D   Y+ +L   C+  ++    
Sbjct: 349 ITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICY 408

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M      PD  ++S+LI  + R+ QL  AL  F  M   G+ P+ V  TI+++G+
Sbjct: 409 DLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGF 468

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + EA    D++ + G V ++ TY  I+NGLC+     +   +F +M++RG  PD 
Sbjct: 469 SNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDT 528

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++ +I G  K  ++ +A  L+  M  +  KP+I TY +LI+G C   ++ +   L+  
Sbjct: 529 VLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKH 588

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI   ++P+ I Y  LI  YC   ++  A  ++ EM                        
Sbjct: 589 MIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREM------------------------ 624

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                       +EG+  DS  Y  LI GF +   MD A   + +M N+GL P V+TY  
Sbjct: 625 -----------ETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTD 673

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           ++ G+ + G    + ++   M++ G+ PD
Sbjct: 674 LIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 194/368 (52%), Gaps = 2/368 (0%)

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ--LDRALMYFREMKSAGLVPDNVLYTII 176
              +F +M   G +P+I S+S L+ +++   +  L+ A     EM+  G+ P+   Y   
Sbjct: 195 VRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTY 254

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           + G CR   V  A      + ++G   +   +N +++G C    + +A ++F+ M + G 
Sbjct: 255 LYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGF 314

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD ++++ L+ G CK G++     +   M +  I P++V+Y++L+ G C+ G +E A +
Sbjct: 315 VPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFE 374

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+  +  +    ++I Y I+++G C    +   + LW +MV     P   + +++I  YC
Sbjct: 375 LFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYC 434

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           R     +A E    M+ +G+ P+ ++   L++GF  E  + +AF  + K+   G+VP++ 
Sbjct: 435 RHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLC 494

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY VI+ G C+  + +D   I   MI++G  PD   Y+ +I+G V   +L+EAFR + +M
Sbjct: 495 TYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKM 554

Query: 477 LQRGFVPD 484
           +  G  P+
Sbjct: 555 VDEGTKPN 562



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 157/350 (44%), Gaps = 39/350 (11%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           +Y  +I  +       +AL    E  + G  + V   N +L GL     +     LF++M
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGVELQVC--NFLLKGLVEGNQIMYVRSLFDDM 202

Query: 232 LERGVFPDFYTFTTL-------------------------------------IHGHCKDG 254
              G  P+ Y+++ L                                     ++G C+  
Sbjct: 203 KISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAK 262

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            +  A N   ++ Q+    +   +N +I GFC  G++ KA +++  M      P+  SY 
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYS 322

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
           IL++G C  G V   + +  EM   GI P LVS ++++ G CR+G    A E   ++  +
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ 382

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G   D I Y+ +++G  +  +++  + L + M +   VPD   Y+ ++  +CR  ++ ++
Sbjct: 383 GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEA 442

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +   MI  G+ P+  T T L++G  ++  + EAF F D++ Q G VP+
Sbjct: 443 LEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPN 492



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 83/176 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K   +  A     +M  +G  P+  TY +LIN  C +  L E   L   M G+G
Sbjct: 534 IIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEG 593

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    Y SLI   CK+     A E+  EM   GLS D+  Y  L+    +   M  A+
Sbjct: 594 LTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQ 653

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
               EM  +G+ P +V+++ LI  + + G   +A++ +  M  AG+ PD  L  I+
Sbjct: 654 LFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL 709


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 271/520 (52%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ ALC+  +ID+A + L E+E+ G+ P  VTYN L++A CR G +EEAFQL   M    
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P + T+  LINGL +  R      VL EM   G++P+   YN L+   CR+ + SEA 
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+   +V+++ +     + G+++ A     EM  AG+     L+  ++  +
Sbjct: 342 RLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWH 401

Query: 181 CRNGFVLE-ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            R    L+  L++  EM+ +    +       +  LC+     EA +++  +L +G+  +
Sbjct: 402 LRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVN 461

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T   LIHG C+  NM +A  +   M    ++ D +TYN +I   CK  +ME+A +L  
Sbjct: 462 IATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRD 521

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DMI R   P+  ++   +  YC++G V +   L  +M  +G+KP +V+  TII GYC++ 
Sbjct: 522 DMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 581

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D  KA+++L +++  G+ P+++ YN LI G+ R  ++  A  ++  M++ G+ P  ITYN
Sbjct: 582 DVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYN 641

Query: 420 -----------------------------------VILTGFCRQGRMHDSELILWRMIEK 444
                                              +I+ GFC+ G++ ++ +    M  +
Sbjct: 642 SLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYR 701

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            + P++ TYTTL+  +    N +EAF+  DEM+  G VPD
Sbjct: 702 DIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPD 741



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 218/439 (49%), Gaps = 39/439 (8%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG--VAPDIVSFSTL 141
           A +   E+   G SP   T N L+        +  A ++F EM R G  VAPD+ +++ +
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEM-RDGNAVAPDVYTYTVM 222

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I    R G++D A +   E++ +G+ P  V Y ++++  CR+G V EA +++  M+E   
Sbjct: 223 IKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRL 282

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
              +VT+  ++NGL R +   E D +  EM   G+ P+   +  LI  HC++G+ ++AL 
Sbjct: 283 RPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALR 342

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL---------------------WA- 299
           LFD M  K IK  +VTYN +    CK GEME A ++                     W  
Sbjct: 343 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHL 402

Query: 300 --------------DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
                         +M++R + PN       I   C  G   EA  +W+ ++GKG+   +
Sbjct: 403 RGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNI 462

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            + N +I G C+  +  +A + L  MV  GV+ D I+YN +I    +   M++A  L   
Sbjct: 463 ATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDD 522

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  +G  PD+ T+N  L  +C  G++ D   +L +M  +GL PD  TY T+I+G+    +
Sbjct: 523 MIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 582

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           + +A ++  E+++ G  P+
Sbjct: 583 VHKANKYLIELIKNGLRPN 601



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 224/409 (54%), Gaps = 1/409 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR-EGFLEEAFQLMNSMSGK 59
           +  ALCK+ +++ A+  L EM   G+      +N+++  + R  G L+   +L+  M  +
Sbjct: 362 IAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVAR 421

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            LKP      + I  LCK+G+ + A E+   +L  GL  + AT N L+   C+  NM EA
Sbjct: 422 FLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEA 481

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++   M   GV  D ++++ +I    +  +++ A+    +M   G  PD   +   +  
Sbjct: 482 TKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRA 541

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC  G V + L + D+M  +G   D+VTY TI++G C+AK + +A+    E+++ G+ P+
Sbjct: 542 YCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPN 601

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  LI G+ ++G+++ A+ + D M    I+P  +TYN+L+   C  G +E+A +++A
Sbjct: 602 AVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFA 661

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             I + I    I Y I+I G+C +G + EA   + EM  + I+P  ++  T++  YC+ G
Sbjct: 662 QCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCG 721

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +  +A +   +MVS G+ PD++SYNTLI+G    +++DK     ++M +
Sbjct: 722 NKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 1/165 (0%)

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDSIS 382
           G ++ A   + E+  +G  P++ +CN +++     G    A +   +M     V PD  +
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y  +I    R   +D AF +++++E  G+ P V+TYNV++   CR GR+ ++  +  RM+
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           E  L P   T+  LING        E      EM   G  P++  
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVI 323


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 259/485 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K++           +GV  D V ++++++AY R G L +A ++   M  +G
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY+ LINGLC+ GR   A  V  ++L+ GL P   TY++L+   C+ EN+ +  
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++  M R+G  PD+V  S LI   SR G +D AL +F +    GL  +N L+  +I+G 
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGC 495

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R     + LKM   M     + DVVTY  ++ GL     L EA  LF ++L++G  PD 
Sbjct: 496 FRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDH 555

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TLI G CK  +    L +F +M    I PDI  YN LI+ F + G +E   +L  +
Sbjct: 556 IIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLRE 615

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +I   + P+ ++Y  +I GYCS+   ++A +L+  +     +P  ++   +I  YC+ G 
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A    S M+  G +P+ ++Y+ LI+G+ + EN + AF L  KM    + P++++Y++
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G M ++ L     I + L PD   Y  LI G+     L EA   +D ML  G
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNG 795

Query: 481 FVPDD 485
            +PDD
Sbjct: 796 IMPDD 800



 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 262/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC  ++I  A  F   M + G  P+ VT++TLIN YC+E  L+EAF L N M  KG
Sbjct: 246 ILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKG 305

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +  Y+ LINGL + G+ +    +    L  G+  D   +++++    R  ++ +A 
Sbjct: 306 IVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAI 365

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++  M + G++P++V++S LI    RNG++  A   F ++   GL P  + Y+ +I+G+
Sbjct: 366 EVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGF 425

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  + +   +   ML KG V DVV  + ++NGL R  M+ EA   F + ++RG+  + 
Sbjct: 426 CKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNN 485

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y F  LI G  +       L ++ +M    + PD+VTY  L+ G  + G +++A  L+  
Sbjct: 486 YLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQ 545

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ +  SP++I Y  LI+G+C         +++  M   GI P +   N +I  + R G 
Sbjct: 546 LLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGC 605

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E L +++  G++PD ++YNT+I G+   +   KA  L   ++     P+ IT+ +
Sbjct: 606 VENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++  +C+ GRM D+ LI   M+E+G  P+  TY+ LI+G+    N + AF  +++ML   
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 481 FVPD 484
             P+
Sbjct: 726 VSPN 729



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 244/515 (47%), Gaps = 66/515 (12%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK---------------------- 62
           G  P TV Y+ L++ YCR G ++ A      MS  G+                       
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 63  --------PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
                    G+  Y  + N   K+G  ++       +++ GL P     N +L   C   
Sbjct: 195 LENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGN 254

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            +  A + F  M R G +P++V+FSTLI ++ +  +LD A   +  M   G+VPD V+Y+
Sbjct: 255 QIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+ING  R G + E   +    L +G  MDVV +++I++   R   L +A +++  ML+ 
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G+ P+  T++ LI+G C++G + +A  +F  + ++ ++P ++TY++LIDGFCK   +   
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK------------ 342
             L+  M+ +   P+ +   +LING    G + EA R +++ V +G+             
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 343 -----------------------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
                                  P +V+   ++KG    G   +A     +++ +G  PD
Sbjct: 495 CFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD 554

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I Y TLI+GF ++ +      +   M++ G+ PD+  YNV++  F R+G + +   +L 
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +I+ GL PD  TY T+I G+ S     +A +  +
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFE 649



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 220/422 (52%), Gaps = 37/422 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC++ ++  A     ++ ++G+ P  +TY++LI+ +C+   L + F L   M  KG
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS----------------------- 97
             P V   + LINGL ++G  D A     + ++ GL+                       
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505

Query: 98  ------------PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                       PD  TY  L+     +  + EA  +F ++ ++G +PD + + TLI  F
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +       L  F+ M+S G+ PD  +Y ++IN + R G V   L++  E+++ G   D+
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERG-VFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VTYNT++ G C  K+ ++A  LF E+L+ G   P+  TFT LI  +CKDG M+ A+ +F 
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFS 684

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M ++  +P+I+TY+ LIDG+ K    E A +L+  M+  ++SPN +SY ILI+G C  G
Sbjct: 685 SMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKG 744

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA   +   +G+ + P +++   +I+GYC+ G  ++A      M+  G+ PD +   
Sbjct: 745 LMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQK 804

Query: 385 TL 386
            L
Sbjct: 805 AL 806



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 221/426 (51%), Gaps = 43/426 (10%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G +P T  Y+ LL   CR   +  A + F  MS+ GV+    + S ++ +   + ++D  
Sbjct: 136 GSNPST-VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 155 LMYFREM-KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           L  + EM K  G+      Y  + N + + G V + L     ++E+G V  +V  N IL 
Sbjct: 195 LENYEEMCKGLGV------YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILK 248

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLC    +  A D F+ M+  G  P+  TF+TLI+ +CK+  +++A +L+++M +K I P
Sbjct: 249 GLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVP 308

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D+V Y+ LI+G  + G++E+ N L++  ++R +  + + +  +++ Y  +G + +A  ++
Sbjct: 309 DLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVY 368

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
             M+ +GI P +V+ + +I G CR+G   +A     +++ +G++P  ++Y++LI+GF + 
Sbjct: 369 TRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS 428

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN------ 447
           EN+   F L   M  +G VPDV+  ++++ G  RQG M ++    ++ +++GL       
Sbjct: 429 ENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLF 488

Query: 448 -----------------------------PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
                                        PD  TYT L+ G   Q  L EA     ++L+
Sbjct: 489 NALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLK 548

Query: 479 RGFVPD 484
           +GF PD
Sbjct: 549 KGFSPD 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 35/160 (21%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAY-------------------- 40
           +++A CKD ++D A +    M ++G  P+ +TY+ LI+ Y                    
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 41  ---------------CREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                          C++G +EEA        G+ L P V  Y  LI G CK GR   A 
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            + D ML  G+ PD      L     +    S    +F E
Sbjct: 786 MLYDHMLVNGIMPDDLLQKALAEYGFQDSQASIYSTVFPE 825


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 157/473 (33%), Positives = 263/473 (55%), Gaps = 1/473 (0%)

Query: 12  DSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           D+  + L +++   G+  DTV YN L+N       ++    + + M  +G+KP V T+N+
Sbjct: 35  DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 94

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+  LC+  +   A  +L+EM   G++PD  T+ TL+     + ++  A  +   M   G
Sbjct: 95  LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 154

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
            +   V+ + LI  + + G+++ AL Y ++  + G  PD + Y   +NG C+N  V  AL
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 214

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+ D M+++G   DV TYN ++N LC+   L EA  + N+M++RG  PD  TF TLI   
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C    + +AL+L   +T K + PD+ T+N LI+  CKVG+   A +L+ +M +   +P+ 
Sbjct: 275 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 334

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LI+  CS+G + +A  L  +M   G   + ++ NTII G C+     +A+E   +
Sbjct: 335 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 394

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  +G+  ++I++NTLI+G  +++ +D AF L+++M ++GL P+ ITYN ILT +C+QG 
Sbjct: 395 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 454

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +  +  IL  M   G   D  TY TLING       + A +    M  +G  P
Sbjct: 455 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 507



 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 156/484 (32%), Positives = 259/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K+   +    EM  +G+ PD VT+NTL+ A CR   +  A  ++  MS +G
Sbjct: 60  LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 119

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ G  ++G  + A  V   ML+MG S    T N L+   C+   + +A 
Sbjct: 120 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 179

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +    G  PD ++++T +    +N  +  AL     M   G  PD   Y I++N  
Sbjct: 180 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 239

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG + EA  + ++M+++GC+ D+ T+NT++  LC    L EA DL  ++  +GV PD 
Sbjct: 240 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 299

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF  LI+  CK G+ + AL LF+ M      PD VTYNTLID  C +G++ KA  L  D
Sbjct: 300 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 359

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S     + I+Y  +I+G C    + EA  ++ +M  +GI    ++ NT+I G C+   
Sbjct: 360 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 419

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E +++M+SEG+ P++I+YN+++  + ++ ++ KA  ++  M   G   DV+TY  
Sbjct: 420 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 479

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ GR   +  +L  M  KG+ P    Y  ++     +NN+++A     EM + G
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539

Query: 481 FVPD 484
             PD
Sbjct: 540 EPPD 543



 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 251/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+ H++ +A + L EM  +GV PD  T+ TL+  +  EG +E A ++   M   G
Sbjct: 95  LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 154

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 T N LING CK GR + A   + + +  G  PD  TYNT +   C+ +++  A 
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 214

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + G  PD+ +++ ++    +NGQL+ A     +M   G +PD   +  +I   
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EAL +  ++  KG   DV T+N ++N LC+      A  LF EM   G  PD 
Sbjct: 275 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 334

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI   C  G + KAL+L   M         +TYNT+IDG CK   +E+A +++  
Sbjct: 335 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 394

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + IS N I++  LI+G C    + +AF L  +M+ +G++P  ++ N+I+  YC+ GD
Sbjct: 395 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 454

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA + L  M + G + D ++Y TLING  +      A  ++  M  +G+ P    YN 
Sbjct: 455 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 514

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           +L    R+  + D+  +   M E G  PD  TY  +  G       +KEAF F  EM+ +
Sbjct: 515 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 574

Query: 480 GFVPD 484
           GF+P+
Sbjct: 575 GFIPE 579



 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 240/430 (55%), Gaps = 1/430 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +++ A  ++ +    G  PD +TYNT +N  C+   +  A ++M+ M  +G
Sbjct: 165 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 224

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTYN ++N LCK G+ + AK +L++M+  G  PD  T+NTL+   C    + EA 
Sbjct: 225 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 284

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +++ +GV+PD+ +F+ LI    + G    AL  F EMK++G  PD V Y  +I+  
Sbjct: 285 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 344

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +AL +  +M   GC    +TYNTI++GLC+   + EA+++F++M  +G+  + 
Sbjct: 345 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 404

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI G CKD  ++ A  L + M  + ++P+ +TYN+++  +CK G+++KA  +   
Sbjct: 405 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 464

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +     + ++YG LING C  G    A ++   M  KG++PT  + N +++   R  +
Sbjct: 465 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 524

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN-MDKAFALVSKMENQGLVPDVITYN 419
              A     +M   G  PD+++Y  +  G  R    + +AF  + +M ++G +P+  ++ 
Sbjct: 525 IRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFR 584

Query: 420 VILTGFCRQG 429
           ++  G    G
Sbjct: 585 MLAEGLLNLG 594



 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 227/436 (52%), Gaps = 2/436 (0%)

Query: 52  LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ--MGLSPDTATYNTLLVE 109
           L+  M  +G +  +   +S ++    +   D A +++   LQ   G+  DT  YN LL  
Sbjct: 4   LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNV 63

Query: 110 SCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD 169
                 M   E ++ EM  RG+ PD+V+F+TL+    R  Q+  A++   EM S G+ PD
Sbjct: 64  LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 123

Query: 170 NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
              +T ++ G+   G +  AL+++  MLE GC    VT N ++NG C+   + +A     
Sbjct: 124 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 183

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
           + +  G  PD  T+ T ++G C++ ++  AL + D+M Q+   PD+ TYN +++  CK G
Sbjct: 184 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 243

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           ++E+A  +   M+ R   P+  ++  LI   C+   + EA  L  ++  KG+ P + + N
Sbjct: 244 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 303

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I   C+ GD   A     +M + G  PD ++YNTLI+       + KA  L+  ME+ 
Sbjct: 304 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 363

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G     ITYN I+ G C++ R+ ++E +  +M  +G++ +  T+ TLI+G      + +A
Sbjct: 364 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 423

Query: 470 FRFHDEMLQRGFVPDD 485
           F   ++M+  G  P++
Sbjct: 424 FELINQMISEGLQPNN 439



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 1/270 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   K+  A   L +ME  G    T+TYNT+I+  C++  +EEA ++ + M  +G
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 399

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     T+N+LI+GLCK  + D A E++++M+  GL P+  TYN++L   C++ ++ +A 
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 459

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M+  G   D+V++ TLI    + G+   AL   R M+  G+ P    Y  ++   
Sbjct: 460 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 519

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGVFPD 239
            R   + +AL +  EM E G   D +TY  +  GLCR    + EA D   EM+++G  P+
Sbjct: 520 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 579

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           F +F  L  G    G  +  +   +I+ +K
Sbjct: 580 FSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 609


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 147/452 (32%), Positives = 256/452 (56%), Gaps = 1/452 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           +N LI+ YCR G +  A +L+  M  +G  P + TYN+L+NG CK G    AK+++ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
            + L P+  TY TL+   C+ + + +A  ++ EM+ + + PD+V+++ ++    ++G+++
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            A   FREM+  G+VP+   Y  +I+   + G V EA  ++  M+ +G   DVV Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           +GL +A M   A+D+F  +LE  + P+  T++ LI GHCK G++NK   L   M +K I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+++ Y++++DG+ K G + +A  +   M+ R I PN   YG LI+GY        A  L
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + EM  +G++      ++ +    RSG   +ADE    M+S G+ PD ++Y ++++GF +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
                 AF +  +M  +    DV+ YNV++ G  + G+ ++SE     M + GL PD +T
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSAT 438

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + T+IN +  + NL  A +  +EM   G  P+
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPN 470



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 269/519 (51%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C++ +I  A   L  M+ +G  PD VTYNTL+N +C+ G L  A +LM  +S   
Sbjct: 23  LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V TY +LI+  CK    + A  + DEM    L PD  TY  ++   C+   + EA+
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM   GV P+  S++TLI    + G +  A +    M   G+  D V+YT +++G 
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A  M   +LE+  V + VTY+ +++G C+   + + + L  EM E+ +FP+ 
Sbjct: 203 FKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNV 262

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV------------ 288
             +++++ G+ K G +N+A+++   M Q++I P++  Y TLIDG+ K             
Sbjct: 263 IVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKE 322

Query: 289 -----------------------GEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                                  G ME+A++L+ DM+SR + P+ ++Y  +++G+   G 
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
            ++AF +  EM  K     +V+ N +I G  + G   +++ F + M   G+ PDS ++NT
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNT 441

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +IN + +E N+  A  L+++M++ GL P+ IT N+++   C  G +  +  +L  M+  G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +P  +T+  +++              HD+++  G   D
Sbjct: 502 FHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLD 540



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 270/532 (50%), Gaps = 52/532 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   ++  ++ L EME+K ++P+ + Y+++++ Y ++G L EA  +M  M  + 
Sbjct: 233 LIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF Y +LI+G  K  +   A ++  EM   GL  +    ++ +    R   M EA+
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYTIIIN 178
           E+F +M  RG+ PD V++++++  F + G+   A    +EM  KS+G   D V Y ++IN
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF--DVVAYNVLIN 410

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G  + G   E+      M + G   D  T+NT++N  C+   L  A  L NEM   G+ P
Sbjct: 411 GLFKLG-KYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIM----------TQKS------------------ 270
           +  T   L+   C  G + K ++L + M          T K+                  
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMH 529

Query: 271 -------IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                  +K D+ TYNTLI  FC++G + +A  ++ DM+ + I  + I+Y  LI+GYC  
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCIS 589

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
            H+ +AF +  +M+ +G+ P + + N ++ G   +    +A   +++M   G+ P++ +Y
Sbjct: 590 SHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTY 649

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + L++G  +  NM +   L  +M  +G VP   TYNV+++ F +  +M  ++ ++  M  
Sbjct: 650 DILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV 709

Query: 444 KGLNPDRSTYTTLI------------NGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +G+ P+ STY  LI            N  + ++   EA R  +EM ++GF+P
Sbjct: 710 RGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 201/383 (52%), Gaps = 13/383 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K +S   F   M Q G+ PD+ T+NT+INAYC+EG L  A +L+N M   G
Sbjct: 408 LINGLFKLGKYESES-FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP   T N L+  LC  G  ++  ++L++ML MG  P   T+  +L  S +        
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  ++   GV  D+ +++TLI  F R G + RA + F++M   G++ D + Y  +I+GY
Sbjct: 527 HMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + +A  +  +ML +G   +V TYN +L GL  A+++ EA  L N+M ERG+ P+ 
Sbjct: 587 CISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNA 646

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L+ GH K GNM + + L+  M  K   P   TYN LI  F K  +M +A +L  +
Sbjct: 647 TTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQE 706

Query: 301 MISRKISPNYISYGILINGYCSM------------GHVTEAFRLWYEMVGKGIKPTLVSC 348
           M  R I PN  +Y ILI G+  +             +  EA RL+ EM  KG  P   + 
Sbjct: 707 MQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTL 766

Query: 349 NTIIKGYCRSGDASKADEFLSKM 371
             I     + G  + A   L+K+
Sbjct: 767 ACISFTLAKPGKKADAQRILNKL 789



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+   I  A +   +M  KG+  D +TYN LI+ YC    L++AF + + M  +G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN L+ GL        A  ++++M + GL P+  TY+ L+    +  NM E  
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++CEM  +G  P   +++ LI  F++  ++ +A    +EM+  G+ P++  Y I+I G+
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +                       ++    LN   +     EA  LF EM E+G  P  
Sbjct: 727 YK-----------------------LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCE 763

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
            T   +     K G    A  + + + +K    +++ 
Sbjct: 764 NTLACISFTLAKPGKKADAQRILNKLYKKKTVQELLA 800


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 147/452 (32%), Positives = 256/452 (56%), Gaps = 1/452 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           +N LI+ YCR G +  A +L+  M  +G  P + TYN+L+NG CK G    AK+++ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
            + L P+  TY TL+   C+ + + +A  ++ EM+ + + PD+V+++ ++    ++G+++
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            A   FREM+  G+VP+   Y  +I+   + G V EA  ++  M+ +G   DVV Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           +GL +A M   A+D+F  +LE  + P+  T++ LI GHCK G++NK   L   M +K I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+++ Y++++DG+ K G + +A  +   M+ R I PN   YG LI+GY        A  L
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + EM  +G++      ++ +    RSG   +ADE    M+S G+ PD ++Y ++++GF +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
                 AF +  +M  +    DV+ YNV++ G  + G+ ++SE     M + GL PD +T
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSAT 438

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + T+IN +  + NL  A +  +EM   G  P+
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPN 470



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 269/519 (51%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C++ +I  A   L  M+ +G  PD VTYNTL+N +C+ G L  A +LM  +S   
Sbjct: 23  LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V TY +LI+  CK    + A  + DEM    L PD  TY  ++   C+   + EA+
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM   GV P+  S++TLI    + G +  A +    M   G+  D V+YT +++G 
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A  M   +LE+  V + VTY+ +++G C+   + + + L  EM E+ +FP+ 
Sbjct: 203 FKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNV 262

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV------------ 288
             +++++ G+ K G +N+A+++   M Q++I P++  Y TLIDG+ K             
Sbjct: 263 IVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKE 322

Query: 289 -----------------------GEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                                  G ME+A++L+ DM+SR + P+ ++Y  +++G+   G 
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
            ++AF +  EM  K     +V+ N +I G  + G   +++ F + M   G+ PDS ++NT
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNT 441

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +IN + +E N+  A  L+++M++ GL P+ IT N+++   C  G +  +  +L  M+  G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +P  +T+  +++              HD+++  G   D
Sbjct: 502 FHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLD 540



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 270/532 (50%), Gaps = 52/532 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   ++  ++ L EME+K ++P+ + Y+++++ Y ++G L EA  +M  M  + 
Sbjct: 233 LIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF Y +LI+G  K  +   A ++  EM   GL  +    ++ +    R   M EA+
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYTIIIN 178
           E+F +M  RG+ PD V++++++  F + G+   A    +EM  KS+G   D V Y ++IN
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF--DVVAYNVLIN 410

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G  + G   E+      M + G   D  T+NT++N  C+   L  A  L NEM   G+ P
Sbjct: 411 GLFKLG-KYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIM----------TQKS------------------ 270
           +  T   L+   C  G + K ++L + M          T K+                  
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMH 529

Query: 271 -------IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                  +K D+ TYNTLI  FC++G + +A  ++ DM+ + I  + I+Y  LI+GYC  
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCIS 589

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
            H+ +AF +  +M+ +G+ P + + N ++ G   +    +A   +++M   G+ P++ +Y
Sbjct: 590 SHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTY 649

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + L++G  +  NM +   L  +M  +G VP   TYNV+++ F +  +M  ++ ++  M  
Sbjct: 650 DILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV 709

Query: 444 KGLNPDRSTYTTLI------------NGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +G+ P+ STY  LI            N  + ++   EA R  +EM ++GF+P
Sbjct: 710 RGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 203/388 (52%), Gaps = 13/388 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K +S   F   M Q G+ PD+ T+NT+INAYC+EG L  A +L+N M   G
Sbjct: 408 LINGLFKLGKYESES-FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP   T N L+  LC  G  ++  ++L++ML MG  P   T+  +L  S +        
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  ++   GV  D+ +++TLI  F R G + RA + F++M   G++ D + Y  +I+GY
Sbjct: 527 HMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + +A  +  +ML +G   +V TYN +L GL  A+++ EA  L N+M ERG+ P+ 
Sbjct: 587 CISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNA 646

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L+ GH K GNM + + L+  M  K   P   TYN LI  F K  +M +A +L  +
Sbjct: 647 TTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQE 706

Query: 301 MISRKISPNYISYGILINGYCSM------------GHVTEAFRLWYEMVGKGIKPTLVSC 348
           M  R I PN  +Y ILI G+  +             +  EA RL+ EM  KG  P   + 
Sbjct: 707 MQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTL 766

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGV 376
             I     + G  + A   L+K+  + V
Sbjct: 767 ACISFTLAKPGKKADAQRILNKLYKKKV 794



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 23/272 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+   I  A +   +M  KG+  D +TYN LI+ YC    L++AF + + M  +G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN L+ GL        A  ++++M + GL P+  TY+ L+    +  NM E  
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++CEM  +G  P   +++ LI  F++  ++ +A    +EM+  G+ P++  Y I+I G+
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +                       ++    LN   +     EA  LF EM E+G  P  
Sbjct: 727 YK-----------------------LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCE 763

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            T   +     K G    A  + + + +K +K
Sbjct: 764 NTLACISFTLAKPGKKADAQRILNKLYKKKVK 795


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 157/473 (33%), Positives = 263/473 (55%), Gaps = 1/473 (0%)

Query: 12  DSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           D+  + L +++   G+  DTV YN L+N       ++    + + M  +G+KP V T+N+
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+  LC+  +   A  +L+EM   G++PD  T+ TL+     + ++  A  +   M   G
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
            +   V+ + LI  + + G+++ AL Y ++  + G  PD + Y   +NG C+N  V  AL
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+ D M+++G   DV TYN ++N LC+   L EA  + N+M++RG  PD  TF TLI   
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C    + +AL+L   +T K + PD+ T+N LI+  CKVG+   A +L+ +M +   +P+ 
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LI+  CS+G + +A  L  +M   G   + ++ NTII G C+     +A+E   +
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  +G+  ++I++NTLI+G  +++ +D AF L+++M ++GL P+ ITYN ILT +C+QG 
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +  +  IL  M   G   D  TY TLING       + A +    M  +G  P
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599



 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 258/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K+   +    EM  +G+ PD VT+NTL+ A CR   +  A  ++  MS +G
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 211

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ G  ++G  + A  V   ML+MG S    T N L+   C+   + +A 
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +    G  PD ++++T +    +N  +  AL     M   G  PD   Y I++N  
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG + EA  + ++M+++GC+ D+ T+NT++  LC    L EA DL  ++  +GV PD 
Sbjct: 332 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 391

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF  LI+  CK G+ + AL LF+ M      PD VTYNTLID  C +G++ KA  L  D
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S     + I+Y  +I+G C    + EA  ++ +M  +GI    ++ NT+I G C+   
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   +++M+SEG+ P++I+YN+++  + ++ ++ KA  ++  M   G   DV+TY  
Sbjct: 512 IDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ GR   +  +L  M  KG+ P    Y  ++     +NN+++A     EM + G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 481 FVPD 484
             PD
Sbjct: 632 EPPD 635



 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 251/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+ H++ +A + L EM  +GV PD  T+ TL+  +  EG +E A ++   M   G
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 T N LING CK GR + A   + + +  G  PD  TYNT +   C+ +++  A 
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + G  PD+ +++ ++    +NGQL+ A     +M   G +PD   +  +I   
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EAL +  ++  KG   DV T+N ++N LC+      A  LF EM   G  PD 
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI   C  G + KAL+L   M         +TYNT+IDG CK   +E+A +++  
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + IS N I++  LI+G C    + +AF L  +M+ +G++P  ++ N+I+  YC+ GD
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA + L  M + G + D ++Y TLING  +      A  ++  M  +G+ P    YN 
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           +L    R+  + D+  +   M E G  PD  TY  +  G       +KEAF F  EM+ +
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666

Query: 480 GFVPD 484
           GF+P+
Sbjct: 667 GFIPE 671



 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 240/430 (55%), Gaps = 1/430 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +++ A  ++ +    G  PD +TYNT +N  C+   +  A ++M+ M  +G
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTYN ++N LCK G+ + AK +L++M+  G  PD  T+NTL+   C    + EA 
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +++ +GV+PD+ +F+ LI    + G    AL  F EMK++G  PD V Y  +I+  
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +AL +  +M   GC    +TYNTI++GLC+   + EA+++F++M  +G+  + 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI G CKD  ++ A  L + M  + ++P+ +TYN+++  +CK G+++KA  +   
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +     + ++YG LING C  G    A ++   M  KG++PT  + N +++   R  +
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 616

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN-MDKAFALVSKMENQGLVPDVITYN 419
              A     +M   G  PD+++Y  +  G  R    + +AF  + +M ++G +P+  ++ 
Sbjct: 617 IRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFR 676

Query: 420 VILTGFCRQG 429
           ++  G    G
Sbjct: 677 MLAEGLLNLG 686



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 246/488 (50%), Gaps = 3/488 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++ AL +    D+A +M    + +    P    Y  +I      G L+    L+  M  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ--MGLSPDTATYNTLLVESCRKENMS 117
           G +  +   +S ++    +   D A +++   LQ   G+  DT  YN LL        M 
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
             E ++ EM  RG+ PD+V+F+TL+    R  Q+  A++   EM S G+ PD   +T ++
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G+   G +  AL+++  MLE GC    VT N ++NG C+   + +A     + +  G  
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+ T ++G C++ ++  AL + D+M Q+   PD+ TYN +++  CK G++E+A  +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M+ R   P+  ++  LI   C+   + EA  L  ++  KG+ P + + N +I   C+
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            GD   A     +M + G  PD ++YNTLI+       + KA  L+  ME+ G     IT
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN I+ G C++ R+ ++E +  +M  +G++ +  T+ TLI+G      + +AF   ++M+
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMI 523

Query: 478 QRGFVPDD 485
             G  P++
Sbjct: 524 SEGLQPNN 531



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 144/270 (53%), Gaps = 1/270 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   K+  A   L +ME  G    T+TYNT+I+  C++  +EEA ++ + M  +G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     T+N+LI+GLCK  + D A  ++++M+  GL P+  TYN++L   C++ ++ +A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M+  G   D+V++ TLI    + G+   AL   R M+  G+ P    Y  ++   
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGVFPD 239
            R   + +AL +  EM E G   D +TY  +  GLCR    + EA D   EM+++G  P+
Sbjct: 612 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           F +F  L  G    G  +  +   +I+ +K
Sbjct: 672 FSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 701


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 162/485 (33%), Positives = 262/485 (54%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+ H+I  A + + EM   G+ PD  T+ TL+  +  EG +  A ++   M   G
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 T N L++G CK+GR +     +DEM   G  PD  T+N+L+   CR  ++  A 
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHAL 336

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI   M + G  PDI ++++LI    + G+++ A+    +M      P+ V Y  +I+  
Sbjct: 337 EILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL 396

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA ++   +  KG + DV T+N+++ GLC       A +LF EM  +G  PD 
Sbjct: 397 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDE 456

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  LI   C  G + +AL+L   M       ++VTYNTLIDGFCK   +E+A +++ +
Sbjct: 457 FTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDE 516

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + IS N ++Y  LI+G C    V EA +L  +M+ +G+KP   + N+++  +CR+GD
Sbjct: 517 MELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGD 576

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA + +  M S G +PDS++Y TLI G  +   ++ A  L+  ++ +G+V    TYN 
Sbjct: 577 IKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNP 636

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           ++    R+ R  ++  +   M+EKG  PD  TY  +  G  S    + EA  F  EM  +
Sbjct: 637 VIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDK 696

Query: 480 GFVPD 484
           GF+PD
Sbjct: 697 GFLPD 701



 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 248/484 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L   +K+   ++    M  +G+ PD  T+N LI A CR   +  A  +M  M   G
Sbjct: 182 LLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYG 241

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   T+ +L+ G  ++G  + A  + ++M+  G      T N L+   C++  + E  
Sbjct: 242 LSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVL 301

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EMS  G  PD  +F++L+    R G +  AL     M   G  PD   Y  +I G 
Sbjct: 302 SFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGL 361

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA+++ ++M+ +    + VTYNT+++ LC+   + EA +L   +  +G+ PD 
Sbjct: 362 CKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 421

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF +LI G C   N   A+ LF+ M  K   PD  TYN LID  C  G +E+A  L  +
Sbjct: 422 CTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKE 481

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S   S N ++Y  LI+G+C    + EA  ++ EM  +GI   +V+ NT+I G C++  
Sbjct: 482 MESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRR 541

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + + +M+ EG+ PD  +YN+L+  F R  ++ KA  +V  M + G  PD +TY  
Sbjct: 542 VEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGT 601

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + GR+  +  +L  +  KG+     TY  +I     +    EA R   EM+++G
Sbjct: 602 LILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKG 661

Query: 481 FVPD 484
             PD
Sbjct: 662 DPPD 665



 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/464 (32%), Positives = 246/464 (53%), Gaps = 1/464 (0%)

Query: 22  EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC 81
           +Q    P +V Y  ++    ++G      +++  M   G +    T+  LI    K    
Sbjct: 97  KQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELF 156

Query: 82  DRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
           D A  V+D M +  GL  D  TYN LL        +   E +   M  RG+ PD+ +F+ 
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNI 216

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    R  Q+  A++   EM S GL PD   +T ++ G+   G +  AL++R++M+  G
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C    VT N +++G C+   + E     +EM   G  PD +TF +L++G C+ G++  AL
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHAL 336

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            + D+M Q+   PDI TYN+LI G CK+GE+E+A ++   MI R  SPN ++Y  LI+  
Sbjct: 337 EILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL 396

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C    V EA  L   +  KGI P + + N++I+G C + +   A E   +M ++G  PD 
Sbjct: 397 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDE 456

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YN LI+       +++A +L+ +ME+ G   +V+TYN ++ GFC+  R+ ++E I   
Sbjct: 457 FTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDE 516

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M  +G++ +  TY TLI+G      ++EA +  D+ML  G  PD
Sbjct: 517 MELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPD 560



 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 155/478 (32%), Positives = 250/478 (52%), Gaps = 38/478 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  CK+ +I+    F+ EM  +G  PD  T+N+L+N  CR G ++ A ++++ M  +G
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +FTYNSLI GLCK G  + A E+L++M+    SP+T TYNTL+   C++  + EA 
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   ++ +G+ PD+ +F++LI           A+  F EMK+ G  PD   Y ++I+  
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EAL +  EM   GC  +VVTYNT+++G C+ K + EA+++F+EM  +G+  + 
Sbjct: 467 CSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNV 526

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G CK+  + +A  L D M  + +KPD  TYN+L+  FC+ G+++KA  +   
Sbjct: 527 VTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQT 586

Query: 301 MISRKISPNYISYGILINGYCSMGHV---------------------------------- 326
           M S    P+ ++YG LI G    G V                                  
Sbjct: 587 MTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKR 646

Query: 327 -TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA-SKADEFLSKMVSEGVDPDSISYN 384
            +EA RL+ EM+ KG  P  V+   + +G C  G    +A +FL +M  +G  PD  S+ 
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFL 706

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
            L  G       D    LV+++  Q    D  +   ++ GF +  +  D+   L R++
Sbjct: 707 MLAEGLCALSMEDTLIKLVNRVMKQANFSD--SEVSMIMGFLKIRKFQDALATLGRIL 762



 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 155/462 (33%), Positives = 253/462 (54%), Gaps = 2/462 (0%)

Query: 22  EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS-MSGKGLKPGVFTYNSLINGLCKKGR 80
           E+ G+  D  TYN L+N    +G   +  +++NS M  +G+KP V T+N LI  LC+  +
Sbjct: 168 EEFGLKLDAFTYNFLLNVLV-DGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQ 226

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A  +++EM   GLSPD  T+ TL+     + NM+ A  I  +M   G     V+ + 
Sbjct: 227 IRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNV 286

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  + + G+++  L +  EM + G  PD   +  ++NG CR G V  AL++ D ML++G
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D+ TYN+++ GLC+   + EA ++ N+M+ R   P+  T+ TLI   CK+  + +A 
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L  ++T K I PD+ T+N+LI G C       A +L+ +M ++   P+  +Y +LI+  
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           CS G + EA  L  EM   G    +V+ NT+I G+C++    +A+E   +M  +G+  + 
Sbjct: 467 CSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNV 526

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YNTLI+G  +   +++A  L+ +M  +GL PD  TYN +LT FCR G +  +  I+  
Sbjct: 527 VTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQT 586

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           M   G  PD  TY TLI G      ++ A R    +  +G V
Sbjct: 587 MTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMV 628



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 257/485 (52%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           ++  L KD    S +  L EM+  G      T+  LI +Y +    +EA  +++ M  + 
Sbjct: 111 VLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEF 170

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GLK   FTYN L+N L    +    + V   M+  G+ PD  T+N L+   CR   +  A
Sbjct: 171 GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPA 230

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM   G++PD  +F+TL+  F   G ++ AL    +M +AG    NV   ++++G
Sbjct: 231 ILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHG 290

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G + E L   DEM  +G   D  T+N+++NGLCR   +  A ++ + ML+ G  PD
Sbjct: 291 YCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPD 350

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+ +LI G CK G + +A+ + + M  +   P+ VTYNTLI   CK  ++E+A +L  
Sbjct: 351 IFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELAR 410

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + S+ I P+  ++  LI G C   +   A  L+ EM  KG  P   + N +I   C  G
Sbjct: 411 VLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRG 470

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   L +M S G   + ++YNTLI+GF + + +++A  +  +ME QG+  +V+TYN
Sbjct: 471 RLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYN 530

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+  R+ ++  ++ +M+ +GL PD+ TY +L+       ++K+A      M   
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN 590

Query: 480 GFVPD 484
           G  PD
Sbjct: 591 GCEPD 595



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 176/355 (49%), Gaps = 1/355 (0%)

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P  V +  ++    ++G         +EMK  G       + I+I  Y +     EA+ 
Sbjct: 102 VPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVA 161

Query: 192 MRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           + D M E+ G  +D  TYN +LN L     L   + + + M+ RG+ PD  TF  LI   
Sbjct: 162 VVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKAL 221

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+   +  A+ + + M    + PD  T+ TL+ GF + G M  A ++   M++     + 
Sbjct: 222 CRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSN 281

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++  +L++GYC  G + E      EM  +G +P   + N+++ G CR G    A E L  
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ EG DPD  +YN+LI G  +   +++A  ++++M  +   P+ +TYN +++  C++ +
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ 401

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           + ++  +   +  KG+ PD  T+ +LI G    NN + A    +EM  +G  PD+
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDE 456


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 147/452 (32%), Positives = 256/452 (56%), Gaps = 1/452 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           +N LI+ YCR G +  A +L+  M  +G  P + TYN+L+NG CK G    AK+++ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
            + L P+  TY TL+   C+ + + +A  ++ EM+ + + PD+V+++ ++    ++G+++
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            A   FREM+  G+VP+   Y  +I+   + G V EA  ++  M+ +G   DVV Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           +GL +A M   A+D+F  +LE  + P+  T++ LI GHCK G++NK   L   M +K I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+++ Y++++DG+ K G + +A  +   M+ R I PN   YG LI+GY        A  L
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + EM  +G++      ++ +    RSG   +ADE    M+S G+ PD ++Y ++++GF +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
                 AF +  +M  +    DV+ YNV++ G  + G+ ++SE     M + GL PD +T
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSAT 438

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + T+IN +  + NL  A +  +EM   G  P+
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPN 470



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 269/519 (51%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C++ +I  A   L  M+ +G  PD VTYNTL+N +C+ G L  A +LM  +S   
Sbjct: 23  LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V TY +LI+  CK    + A  + DEM    L PD  TY  ++   C+   + EA+
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM   GV P+  S++TLI    + G +  A +    M   G+  D V+YT +++G 
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A  M   +LE+  V + VTY+ +++G C+   + + + L  EM E+ +FP+ 
Sbjct: 203 FKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNV 262

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV------------ 288
             +++++ G+ K G +N+A+++   M Q++I P++  Y TLIDG+ K             
Sbjct: 263 IVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKE 322

Query: 289 -----------------------GEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                                  G ME+A++L+ DM+SR + P+ ++Y  +++G+   G 
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
            ++AF +  EM  K     +V+ N +I G  + G   +++ F + M   G+ PDS ++NT
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNT 441

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +IN + +E N+  A  L+++M++ GL P+ IT N+++   C  G +  +  +L  M+  G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +P  +T+  +++              HD+++  G   D
Sbjct: 502 FHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLD 540



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 270/532 (50%), Gaps = 52/532 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   ++  ++ L EME+K ++P+ + Y+++++ Y ++G L EA  +M  M  + 
Sbjct: 233 LIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF Y +LI+G  K  +   A ++  EM   GL  +    ++ +    R   M EA+
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYTIIIN 178
           E+F +M  RG+ PD V++++++  F + G+   A    +EM  KS+G   D V Y ++IN
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF--DVVAYNVLIN 410

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G  + G   E+      M + G   D  T+NT++N  C+   L  A  L NEM   G+ P
Sbjct: 411 GLFKLG-KYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIM----------TQKS------------------ 270
           +  T   L+   C  G + K ++L + M          T K+                  
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXH 529

Query: 271 -------IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                  +K D+ TYNTLI  FC++G + +A  ++ DM+ + I  + I+Y  LI+GYC  
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCIS 589

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
            H+ +AF +  +M+ +G+ P + + N ++ G   +    +A   +++M   G+ P++ +Y
Sbjct: 590 SHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTY 649

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + L++G  +  NM +   L  +M  +G VP   TYNV+++ F +  +M  ++ ++  M  
Sbjct: 650 DILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV 709

Query: 444 KGLNPDRSTYTTLI------------NGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +G+ P+ STY  LI            N  + ++   EA R  +EM ++GF+P
Sbjct: 710 RGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 201/383 (52%), Gaps = 13/383 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K +S + F   M Q G+ PD+ T+NT+INAYC+EG L  A +L+N M   G
Sbjct: 408 LINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP   T N L+  LC  G  ++  ++L++ML MG  P   T+  +L  S +        
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               ++   GV  D+ +++TLI  F R G + RA + F++M   G++ D + Y  +I+GY
Sbjct: 527 HXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + +A  +  +ML +G   +V TYN +L GL  A+++ EA  L N+M ERG+ P+ 
Sbjct: 587 CISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNA 646

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L+ GH K GNM + + L+  M  K   P   TYN LI  F K  +M +A +L  +
Sbjct: 647 TTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQE 706

Query: 301 MISRKISPNYISYGILINGYCSM------------GHVTEAFRLWYEMVGKGIKPTLVSC 348
           M  R I PN  +Y ILI G+  +             +  EA RL+ EM  KG  P   + 
Sbjct: 707 MQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTL 766

Query: 349 NTIIKGYCRSGDASKADEFLSKM 371
             I     + G  + A   L+K+
Sbjct: 767 ACISFTLAKPGKKADAQRILNKL 789



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+   I  A +   +M  KG+  D +TYN LI+ YC    L++AF + + M  +G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN L+ GL        A  ++++M + GL P+  TY+ L+    +  NM E  
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++CEM  +G  P   +++ LI  F++  ++ +A    +EM+  G+ P++  Y I+I G+
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +                       ++    LN   +     EA  LF EM E+G  P  
Sbjct: 727 YK-----------------------LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCE 763

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
            T   +     K G    A  + + + +K    +++ 
Sbjct: 764 NTLACISFTLAKPGKKADAQRILNKLYKKKTVQELLA 800


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 143/458 (31%), Positives = 255/458 (55%), Gaps = 5/458 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD +TY  L++   +   L +A Q++  M      P   T   ++  LC   R D A+E+
Sbjct: 37  PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 96

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           ++EML  G++ +  TY+ L+   C+ E + EA  +   M+ RG AP +V+++++I  F R
Sbjct: 97  VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
             ++D A  +  +M + G  PD + YT +I G+C++  V   L++  E+  +G   D+VT
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT 216

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T+++GLC+A  L +A D+F EM      P   T+ +LI G+C+ G+M++A+ L   M 
Sbjct: 217 YSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV 273

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
                PD+VTY TL+  FCK+G ++ A +L+  M++ K+SP+ +++  L++G C  G + 
Sbjct: 274 DDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRME 333

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  E+  +G  PT+ + N ++ GYC++    KA+E ++   S G  P++++YN L+
Sbjct: 334 DALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILV 393

Query: 388 NGFVREENMDKAFALVSKMENQG--LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
            G  R    D+A   + ++ ++G      V  Y +IL   CR GR  D+      MI++G
Sbjct: 394 AGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG 453

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             P  +T+ T++      +  ++A    +EM++ G  P
Sbjct: 454 YVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 491



 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 242/437 (55%), Gaps = 5/437 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V +LC   ++D A+  + EM  +G+  + +TY+ L++  C+   L+EA  L+ +M+ +G
Sbjct: 80  VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERG 139

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYNS+I G C+  R D A   +++M+  G  PD  TY  L+   C+  ++    
Sbjct: 140 CAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGL 199

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  E++RRG  PDIV++ST+I    + G+L  A+  F EM  A   P  + Y  +I GY
Sbjct: 200 ELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGY 256

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EA+++  +M++  C  DVVTY T+++  C+   L +A +LF +M+   + PD 
Sbjct: 257 CRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDV 316

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFT+L+ G C +G M  AL L + +T++   P I TYN ++DG+CK  ++ KA +L AD
Sbjct: 317 VTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVAD 376

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK-PTLVSCNTII-KGYCRS 358
             SR   PN ++Y IL+ G C  G   +A +   ++  +G   PT V+   II    CR 
Sbjct: 377 FRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRD 436

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A +F  +M+  G  P + ++ T++    +     +A  L+ +M   G  P   T 
Sbjct: 437 GRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTC 496

Query: 419 NVILTGFCRQGRMHDSE 435
           + +++ +CR G +  ++
Sbjct: 497 DAVVSAYCRAGMIQKAD 513



 Score =  284 bits (726), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 248/461 (53%), Gaps = 6/461 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P T+ +N +I   CR G L  A  +   M+     P   TY  L++GL K  R   A +V
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L EM+     PD  T   ++   C  + + +A E+  EM  RG+A + +++S L+    +
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
             +LD A+     M   G  P  V Y  II G+CR   V EA    ++M+ +GC  D++T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y  ++ G C+++ +    +L  E+  RG  PD  T++T+I G CK G +  A+++F+ M 
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM- 240

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
             S  P  +TYN+LI G+C+ G+M++A +L   M+  K +P+ ++Y  L++ +C MG + 
Sbjct: 241 --SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A+ L+ +MV   + P +V+  +++ G C  G    A E L ++   G  P   +YN ++
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 358

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM-IEKGL 446
           +G+ +   + KA  LV+   ++G VP+ +TYN+++ G CR GR   +   L ++  E G 
Sbjct: 359 DGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGP 418

Query: 447 NPDR-STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            P   + Y  +++         +A +F++EM+QRG+VP  A
Sbjct: 419 CPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAA 459



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 244/478 (51%), Gaps = 5/478 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ L K  ++  A   L EM      PD  T   ++ + C    +++A +L+  M  +G
Sbjct: 45  LVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 104

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY++L++GLCK  R D A  +++ M + G +P   TYN+++   CR   + EA 
Sbjct: 105 MAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAH 164

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +M   G  PDI++++ LIG F ++  + R L    E+   G  PD V Y+ +I+G 
Sbjct: 165 GFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGL 224

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A+ + +EM    C    +TYN+++ G CRA  + EA  L  +M++    PD 
Sbjct: 225 CKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDV 281

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTL+   CK G ++ A  LF  M    + PD+VT+ +L+DG C  G ME A +L  +
Sbjct: 282 VTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE 341

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R   P   +Y  +++GYC    V +A  L  +   +G  P  V+ N ++ G CR+G 
Sbjct: 342 ITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGR 401

Query: 361 ASKADEFLSKMVSEGVD-PDSIS-YNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
             +A ++L ++ SEG   P S++ Y  +++   R+   D A     +M  +G VP   T+
Sbjct: 402 TDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 461

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
             ++   C+  +   +  +L  MI+ G  P   T   +++ +     +++A     E+
Sbjct: 462 ATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 214/389 (55%), Gaps = 4/389 (1%)

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           ++P T  +N ++   CR   +  A  ++ +M+     PD ++++ L+   S+  +L  A+
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
              +EM SA  VPDN   T+++   C    V +A ++ +EML +G   + +TY+ +++GL
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
           C+ + L EA  L   M ERG  P   T+ ++I G C+   +++A    + M  +   PDI
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           +TY  LI GFCK  ++ +  +L  ++  R  +P+ ++Y  +I+G C  G + +A  ++ E
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M      PT ++ N++I GYCR+GD  +A   L KMV +   PD ++Y TL++ F +   
Sbjct: 240 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +D A+ L  +M    L PDV+T+  ++ G C +GRM D+  +L  +  +G  P   TY  
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 356

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +++G+   N +++A     +   RGFVP+
Sbjct: 357 VVDGYCKANQVRKAEELVADFRSRGFVPN 385


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 157/473 (33%), Positives = 263/473 (55%), Gaps = 1/473 (0%)

Query: 12  DSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           D+  + L +++   G+  DTV YN L+N       ++    + + M  +G+KP V T+N+
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+  LC+  +   A  +L+EM   G++PD  T+ TL+     + ++  A  +   M   G
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
            +   V+ + LI  + + G+++ AL Y ++  + G  PD + Y   +NG C+N  V  AL
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+ D M+++G   DV TYN ++N LC+   L EA  + N+M++RG  PD  TF TLI   
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C    + +AL+L   +T K + PD+ T+N LI+  CKVG+   A +L+ +M +   +P+ 
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LI+  CS+G + +A  L  +M   G   + ++ NTII G C+     +A+E   +
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  +G+  ++I++NTLI+G  +++ +D AF L+++M ++GL P+ ITYN ILT +C+QG 
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +  +  IL  M   G   D  TY TLING       + A +    M  +G  P
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599



 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 156/484 (32%), Positives = 259/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K+   +    EM  +G+ PD VT+NTL+ A CR   +  A  ++  MS +G
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 211

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ G  ++G  + A  V   ML+MG S    T N L+   C+   + +A 
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +    G  PD ++++T +    +N  +  AL     M   G  PD   Y I++N  
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG + EA  + ++M+++GC+ D+ T+NT++  LC    L EA DL  ++  +GV PD 
Sbjct: 332 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 391

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF  LI+  CK G+ + AL LF+ M      PD VTYNTLID  C +G++ KA  L  D
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S     + I+Y  +I+G C    + EA  ++ +M  +GI    ++ NT+I G C+   
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E +++M+SEG+ P++I+YN+++  + ++ ++ KA  ++  M   G   DV+TY  
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ GR   +  +L  M  KG+ P    Y  ++     +NN+++A     EM + G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 481 FVPD 484
             PD
Sbjct: 632 EPPD 635



 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 251/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+ H++ +A + L EM  +GV PD  T+ TL+  +  EG +E A ++   M   G
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 T N LING CK GR + A   + + +  G  PD  TYNT +   C+ +++  A 
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + G  PD+ +++ ++    +NGQL+ A     +M   G +PD   +  +I   
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EAL +  ++  KG   DV T+N ++N LC+      A  LF EM   G  PD 
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI   C  G + KAL+L   M         +TYNT+IDG CK   +E+A +++  
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + IS N I++  LI+G C    + +AF L  +M+ +G++P  ++ N+I+  YC+ GD
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA + L  M + G + D ++Y TLING  +      A  ++  M  +G+ P    YN 
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           +L    R+  + D+  +   M E G  PD  TY  +  G       +KEAF F  EM+ +
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666

Query: 480 GFVPD 484
           GF+P+
Sbjct: 667 GFIPE 671



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 240/430 (55%), Gaps = 1/430 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +++ A  ++ +    G  PD +TYNT +N  C+   +  A ++M+ M  +G
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTYN ++N LCK G+ + AK +L++M+  G  PD  T+NTL+   C    + EA 
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +++ +GV+PD+ +F+ LI    + G    AL  F EMK++G  PD V Y  +I+  
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +AL +  +M   GC    +TYNTI++GLC+   + EA+++F++M  +G+  + 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI G CKD  ++ A  L + M  + ++P+ +TYN+++  +CK G+++KA  +   
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +     + ++YG LING C  G    A ++   M  KG++PT  + N +++   R  +
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 616

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN-MDKAFALVSKMENQGLVPDVITYN 419
              A     +M   G  PD+++Y  +  G  R    + +AF  + +M ++G +P+  ++ 
Sbjct: 617 IRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFR 676

Query: 420 VILTGFCRQG 429
           ++  G    G
Sbjct: 677 MLAEGLLNLG 686



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 246/488 (50%), Gaps = 3/488 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++ AL +    D+A +M    + +    P    Y  +I      G L+    L+  M  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ--MGLSPDTATYNTLLVESCRKENMS 117
           G +  +   +S ++    +   D A +++   LQ   G+  DT  YN LL        M 
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
             E ++ EM  RG+ PD+V+F+TL+    R  Q+  A++   EM S G+ PD   +T ++
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G+   G +  AL+++  MLE GC    VT N ++NG C+   + +A     + +  G  
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+ T ++G C++ ++  AL + D+M Q+   PD+ TYN +++  CK G++E+A  +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M+ R   P+  ++  LI   C+   + EA  L  ++  KG+ P + + N +I   C+
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            GD   A     +M + G  PD ++YNTLI+       + KA  L+  ME+ G     IT
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN I+ G C++ R+ ++E +  +M  +G++ +  T+ TLI+G      + +AF   ++M+
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523

Query: 478 QRGFVPDD 485
             G  P++
Sbjct: 524 SEGLQPNN 531



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 1/270 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   K+  A   L +ME  G    T+TYNT+I+  C++  +EEA ++ + M  +G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     T+N+LI+GLCK  + D A E++++M+  GL P+  TYN++L   C++ ++ +A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M+  G   D+V++ TLI    + G+   AL   R M+  G+ P    Y  ++   
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGVFPD 239
            R   + +AL +  EM E G   D +TY  +  GLCR    + EA D   EM+++G  P+
Sbjct: 612 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           F +F  L  G    G  +  +   +I+ +K
Sbjct: 672 FSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 701


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 157/473 (33%), Positives = 263/473 (55%), Gaps = 1/473 (0%)

Query: 12  DSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           D+  + L +++   G+  DTV YN L+N       ++    + + M  +G+KP V T+N+
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+  LC+  +   A  +L+EM   G++PD  T+ TL+     + ++  A  +   M   G
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
            +   V+ + LI  + + G+++ AL Y ++  + G  PD + Y   +NG C+N  V  AL
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+ D M+++G   DV TYN ++N LC+   L EA  + N+M++RG  PD  TF TLI   
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C    + +AL+L   +T K + PD+ T+N LI+  CKVG+   A +L+ +M +   +P+ 
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LI+  CS+G + +A  L  +M   G   + ++ NTII G C+     +A+E   +
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  +G+  ++I++NTLI+G  +++ +D AF L+++M ++GL P+ ITYN ILT +C+QG 
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +  +  IL  M   G   D  TY TLING       + A +    M  +G  P
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599



 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 156/484 (32%), Positives = 259/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K+   +    EM  +G+ PD VT+NTL+ A CR   +  A  ++  MS +G
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRG 211

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ G  ++G  + A  V   ML+MG S    T N L+   C+   + +A 
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +    G  PD ++++T +    +N  +  AL     M   G  PD   Y I++N  
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG + EA  + ++M+++GC+ D+ T+NT++  LC    L EA DL  ++  +GV PD 
Sbjct: 332 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 391

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF  LI+  CK G+ + AL LF+ M      PD VTYNTLID  C +G++ KA  L  D
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S     + I+Y  +I+G C    + EA  ++ +M  +GI    ++ NT+I G C+   
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E +++M+SEG+ P++I+YN+++  + ++ ++ KA  ++  M   G   DV+TY  
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ GR   +  +L  M  KG+ P    Y  ++     +NN+++A     EM + G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 481 FVPD 484
             PD
Sbjct: 632 EPPD 635



 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 251/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+ H++ +A + L EM  +GV PD  T+ TL+  +  EG +E A ++   M   G
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 T N LING CK GR + A   + + +  G  PD  TYNT +   C+ +++  A 
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + G  PD+ +++ ++    +NGQL+ A     +M   G +PD   +  +I   
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EAL +  ++  KG   DV T+N ++N LC+      A  LF EM   G  PD 
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI   C  G + KAL+L   M         +TYNT+IDG CK   +E+A +++  
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + IS N I++  LI+G C    + +AF L  +M+ +G++P  ++ N+I+  YC+ GD
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA + L  M + G + D ++Y TLING  +      A  ++  M  +G+ P    YN 
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           +L    R+  + D+  +   M E G  PD  TY  +  G       +KEAF F  EM+ +
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666

Query: 480 GFVPD 484
           GF+P+
Sbjct: 667 GFIPE 671



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 240/430 (55%), Gaps = 1/430 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +++ A  ++ +    G  PD +TYNT +N  C+   +  A ++M+ M  +G
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTYN ++N LCK G+ + AK +L++M+  G  PD  T+NTL+   C    + EA 
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +++ +GV+PD+ +F+ LI    + G    AL  F EMK++G  PD V Y  +I+  
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +AL +  +M   GC    +TYNTI++GLC+   + EA+++F++M  +G+  + 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI G CKD  ++ A  L + M  + ++P+ +TYN+++  +CK G+++KA  +   
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +     + ++YG LING C  G    A ++   M  KG++PT  + N +++   R  +
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 616

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN-MDKAFALVSKMENQGLVPDVITYN 419
              A     +M   G  PD+++Y  +  G  R    + +AF  + +M ++G +P+  ++ 
Sbjct: 617 IRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFR 676

Query: 420 VILTGFCRQG 429
           ++  G    G
Sbjct: 677 MLAEGLLNLG 686



 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 246/488 (50%), Gaps = 3/488 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++ AL +    D+A +M    + +    P    Y  +I      G L+    L+  M  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ--MGLSPDTATYNTLLVESCRKENMS 117
           G +  +   +S ++    +   D A +++   LQ   G+  DT  YN LL        M 
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
             E ++ EM  RG+ PD+V+F+TL+    R  Q+  A++   EM S G+ PD   +T ++
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G+   G +  AL+++  MLE GC    VT N ++NG C+   + +A     + +  G  
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+ T ++G C++ ++  AL + D+M Q+   PD+ TYN +++  CK G++E+A  +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M+ R   P+  ++  LI   C+   + EA  L  ++  KG+ P + + N +I   C+
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            GD   A     +M + G  PD ++YNTLI+       + KA  L+  ME+ G     IT
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN I+ G C++ R+ ++E +  +M  +G++ +  T+ TLI+G      + +AF   ++M+
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523

Query: 478 QRGFVPDD 485
             G  P++
Sbjct: 524 SEGLQPNN 531



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 1/270 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   K+  A   L +ME  G    T+TYNT+I+  C++  +EEA ++ + M  +G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     T+N+LI+GLCK  + D A E++++M+  GL P+  TYN++L   C++ ++ +A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M+  G   D+V++ TLI    + G+   AL   R M+  G+ P    Y  ++   
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGVFPD 239
            R   + +AL +  EM E G   D +TY  +  GLCR    + EA D   EM+++G  P+
Sbjct: 612 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           F +F  L  G    G  +  +   +I+ +K
Sbjct: 672 FSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 701


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 269/486 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D       +M++ G+  +  TYN LIN +CR   +  A  L+  M   G
Sbjct: 91  LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M++MG  PDT T+ TL+         SEA 
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M +RG  P++V++  ++    + G +D A     +M++A +  + V+Y+ +I+  
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+     +AL +  EM  KG   +V+TY+++++ LC  +  ++A  L ++M+ER + P+ 
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI    K+G + +A  L+D M ++SI PDI TY++LI+GFC    +++A  ++  
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS+   PN ++Y  LING+C    + E   L+ EM  +G+    V+  T+I G+ ++ D
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +MVS+GV P+ ++YNTL++G  +   ++KA  +   ++   + P + TYN+
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ PD   Y T+I+G   +   +EA     +M + G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570

Query: 481 FVPDDA 486
            +PD  
Sbjct: 571 PLPDSG 576



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 251/452 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  +I  A   L +M + G  P  VT ++L+N YC    + +A  L++ M   G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+ +LI+GL    +   A  ++D M+Q G  P+  TY  ++   C++ ++  A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M    +  ++V +ST+I    +    D AL  F EM++ G+ P+ + Y+ +I+  
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +A ++  +M+E+    +VVT+N +++   +   L EA+ L++EM++R + PD 
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI+G C    +++A ++F++M  K   P++VTYNTLI+GFCK   +++  +L+ +
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  N ++Y  LI+G+        A  ++ +MV  G+ P +++ NT++ G C++G 
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA      +    ++P   +YN +I G  +   ++  + L   +  +G+ PDVI YN 
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +++GFCR+G   +++ +  +M E G  PD  T
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 249/476 (52%), Gaps = 2/476 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K+D A      M +    P    +N L++A  +    +    L   M   G+   ++TYN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LIN  C++ +   A  +L +M+++G  P   T ++LL   C  + +S+A  +  +M   
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 130 GVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           G  PD ++F+TLI G+F  N +   A+     M   G  P+ V Y +++NG C+ G +  
Sbjct: 185 GYRPDTITFTTLIHGLFLHN-KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A  + ++M       +VV Y+T+++ LC+ +   +A +LF EM  +GV P+  T+++LI 
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
             C     + A  L   M ++ I P++VT+N LID F K G++ +A KL+ +MI R I P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           +  +Y  LING+C    + EA  ++  M+ K   P +V+ NT+I G+C++    +  E  
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M   G+  ++++Y TLI+GF +  + D A  +  +M + G+ P+++TYN +L G C+ 
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G++  + ++   +    + P   TY  +I G      +++ +     +  +G  PD
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 222/427 (51%)

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G+    G   Y  ++       + D A  +   M++    P    +N LL    + +   
Sbjct: 43  GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
               +  +M R G++ ++ +++ LI  F R  Q+  AL    +M   G  P  V  + ++
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NGYC    + +A+ + D+M+E G   D +T+ T+++GL      +EA  L + M++RG  
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  +++G CK G+++ A NL + M    I+ ++V Y+T+ID  CK    + A  L
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           + +M ++ + PN I+Y  LI+  C+    ++A RL  +M+ + I P +V+ N +I  + +
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A++   +M+   +DPD  +Y++LINGF   + +D+A  +   M ++   P+V+T
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN ++ GFC+  R+ +   +   M ++GL  +  TYTTLI+G     +   A     +M+
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462

Query: 478 QRGFVPD 484
             G  P+
Sbjct: 463 SDGVHPN 469


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 256/477 (53%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           ++ +D A      + ++   P    +N ++ +  +         L   M  +G+KP +  
Sbjct: 63  NNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 122

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            N LIN  C+ G    A  V  ++L+MG  PDT T+ TL    C K  + +A     ++ 
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVV 182

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G   D +S+ TLI    + G+   AL   + +    + P+ V+Y  II+  C+   V 
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EA  +  EM+ KG   DVVTY+ +++G C    L +A DLFN+M+   + PD YTF  L+
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +  CKDG M +   +FD+M ++ IKP+ VTYN+L+DG+C V E+ KA  ++  M    ++
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+  SY I+ING+C +    EA  L+ EM  K I P +V+ +++I G  +SG  S A + 
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           + +M   GV P+  +YN++++   +   +DKA AL++K +++G  PD+ TY++++ G C+
Sbjct: 423 VDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQ 482

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G++ D+  +   ++ KG N D   YT +I G   +    EA     +M   G +PD
Sbjct: 483 SGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539



 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 143/446 (32%), Positives = 250/446 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+   I  A     ++ + G  PDT+T+ TL    C +G +++AF   + +   G
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +Y +LI+GLCK G    A ++L  +    + P+   YNT++   C+ + ++EA 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  +G++PD+V++S LI  F   G+L  A+  F +M    + PD   + I++N +
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G + E   + D M+++G   + VTYN++++G C  K + +A  +FN M + GV PD 
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++ +I+G CK    ++A+NLF  M +K+I PD+VTY++LIDG  K G +  A +L   
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + PN  +Y  +++  C    V +A  L  +   KG +P + + + +IKG C+SG 
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +    ++ +G + D  +Y  +I GF  E   ++A AL+SKME+ G +PD  TY +
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           I+    ++     +E +L  MI +GL
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGL 571



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 251/461 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME +G+ P+ V  N LIN +C+ G +  AF +   +   G  P   T+ +L  GLC KG
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKG 169

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A    D+++ +G   D  +Y TL+   C+      A ++   +    V P++V ++
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    +   ++ A   F EM S G+ PD V Y+ +I+G+C  G + +A+ + ++M+ +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE 289

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               DV T+N ++N  C+   + E   +F+ M+++G+ P+F T+ +L+ G+C    +NKA
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            ++F+ M Q  + PDI +Y+ +I+GFCK+ + ++A  L+ +M  + I P+ ++Y  LI+G
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
               G ++ A +L  +M  +G+ P + + N+I+   C++    KA   L+K   +G  PD
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPD 469

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +Y+ LI G  +   ++ A  +   +  +G   DV  Y +++ GFC +G  +++  +L 
Sbjct: 470 ISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLS 529

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +M + G  PD  TY  +I     ++    A +   EM+ RG
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 229/442 (51%), Gaps = 5/442 (1%)

Query: 48  EAFQLM-----NSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTAT 102
           ++FQ +     N +     K    +Y+S           D A  + + +L+   +P    
Sbjct: 28  QSFQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFE 87

Query: 103 YNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
           +N +L    + ++      +  +M  RG+ P++V+ + LI  F + G +  A   F ++ 
Sbjct: 88  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
             G VPD + +T +  G C  G + +A    D+++  G   D ++Y T+++GLC+     
Sbjct: 148 KMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
            A DL   +    V P+   + T+I   CK   +N+A +LF  M  K I PD+VTY+ LI
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALI 267

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            GFC +G+++ A  L+  MI   I P+  ++ IL+N +C  G + E   ++  M+ +GIK
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P  V+ N+++ GYC   + +KA    + M   GV+PD  SY+ +INGF + +  D+A  L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M  + ++PDV+TY+ ++ G  + GR+  +  ++ +M ++G+ P+  TY ++++    
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCK 447

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
            + + +A     +   +GF PD
Sbjct: 448 THQVDKAIALLTKFKDKGFQPD 469



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 172/310 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   K+  A     +M  + + PD  T+N L+NA+C++G ++E   + + M  +G
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TYNSL++G C     ++AK + + M Q G++PD  +Y+ ++   C+ +   EA 
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM R+ + PD+V++S+LI   S++G++  AL    +M   G+ P+   Y  I++  
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDAL 445

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +A+ +  +  +KG   D+ TY+ ++ GLC++  L +A  +F ++L +G   D 
Sbjct: 446 CKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDV 505

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y +T +I G C +G  N+AL L   M      PD  TY  +I    K  E + A KL  +
Sbjct: 506 YAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565

Query: 301 MISRKISPNY 310
           MI+R +  N+
Sbjct: 566 MIARGLPLNF 575



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 129/241 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   +++ AK     M Q GV PD  +Y+ +IN +C+    +EA  L   M  K 
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY+SLI+GL K GR   A +++D+M   G+ P+  TYN++L   C+   + +A 
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +   +G  PDI ++S LI    ++G+L+ A   F ++   G   D   YTI+I G+
Sbjct: 456 ALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGF 515

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EAL +  +M + GC+ D  TY  I+  L +      A+ L  EM+ RG+  +F
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNF 575

Query: 241 Y 241
           Y
Sbjct: 576 Y 576


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 261/468 (55%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  GV P+  T N LIN++C    +  AF ++  +   G +P   T+ +LI GLC +G
Sbjct: 90  QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEG 149

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+M+  G  P+  TY TL+   C+  N S A  +   M +    PD+V ++
Sbjct: 150 KIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYT 209

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           ++I    ++ Q+  A   F +M   G+ PD   YT +++  C          + ++M+  
Sbjct: 210 SIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 269

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + DVV ++T+++ LC+   +TEA ++ + M++RGV PD  T+TTL+ GHC    M++A
Sbjct: 270 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 329

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD+M +K   PD+++Y TLI+G+CK+ +++KA  L+ +M  ++  P+  +Y  L+ G
Sbjct: 330 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYG 389

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + +A  L++EMV +G  P LV+ + ++   C++    +A   L  + +  ++PD
Sbjct: 390 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPD 449

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              YN +I+G  R   ++ A  L S + ++GL P V TYN+++ G C++G ++++  +  
Sbjct: 450 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFM 509

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            M     +PD  TY T+  G +  N    A +  +EML RGF  D  F
Sbjct: 510 EMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCF 557



 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 144/449 (32%), Positives = 248/449 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C  +++  A   L ++ + G  PD  T+ TLI   C EG + EA  L + M  +G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G    A  +L  M Q    PD   Y +++   C+   ++EA 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G++PDI ++++L+       +         +M ++ ++PD V+++ +++  
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA ++ D M+++G   DVVTY T+++G C    + EA  +F+ M+ +G  PD 
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++TTLI+G+CK   ++KA+ LF+ M +K   PD  TYNTL+ G C VG ++ A  L+ +
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE 405

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++R   P+ ++Y IL++  C   H+ EA  L   +    + P +   N II G CR+G+
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 465

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ P   +YN +I+G  +   +++A  L  +M+     PD  TYN 
Sbjct: 466 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNT 525

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           I  GF +      +  +L  M+ +G + D
Sbjct: 526 IARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 238/457 (52%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  L+ +  +         L   M   G+ P V+T N LIN  C   R   A  V
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  PD  T+ TL+   C +  + EA  +F +M   G  P++V++ TLI    +
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+   R M+     PD V+YT II+  C++  V EA  +  +M+ +G   D+ T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y ++++ LC          L N+M+   + PD   F+T++   CK+G + +A  + D+M 
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q+ ++PD+VTY TL+DG C   EM++A K++  M+ +  +P+ ISY  LINGYC +  + 
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EM  K   P   + NT++ G C  G    A     +MV+ G  PD ++Y+ L+
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +  ++++A AL+  +E   L PD+  YN+I+ G CR G +  +  +   +  KGL+
Sbjct: 423 DSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 482

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P   TY  +I+G   +  L EA +   EM      PD
Sbjct: 483 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPD 519



 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 130/380 (34%), Positives = 220/380 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK     +A   L  MEQ    PD V Y ++I++ C++  + EAF L + M G+G
Sbjct: 176 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG 235

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +FTY SL++ LC          +L++M+   + PD   ++T++   C++  ++EA 
Sbjct: 236 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 295

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI   M +RGV PD+V+++TL+       ++D A+  F  M   G  PD + YT +INGY
Sbjct: 296 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 355

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A+ + +EM  K  + D  TYNT++ GLC    L +A  LF+EM+ RG  PD 
Sbjct: 356 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDL 415

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ L+   CK+ ++ +A+ L   +   ++ PDI  YN +IDG C+ GE+E A  L+++
Sbjct: 416 VTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 475

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+ + P+  +Y I+I+G C  G + EA +L+ EM G    P   + NTI +G+ ++ +
Sbjct: 476 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 535

Query: 361 ASKADEFLSKMVSEGVDPDS 380
             +A + L +M++ G   DS
Sbjct: 536 TLRAIQLLEEMLARGFSADS 555



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 201/394 (51%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML   L   +++ N    +S     + +A   F  +      P IV F+ L+   ++   
Sbjct: 21  MLSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKH 80

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
               L    +M S G+ P+     I+IN +C    V  A  +  ++L+ G   D  T+ T
Sbjct: 81  YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 140

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++ GLC    + EA  LF++M++ G  P+  T+ TLI+G CK GN + A+ L   M Q +
Sbjct: 141 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 200

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            +PD+V Y ++ID  CK  ++ +A  L++ M+ + ISP+  +Y  L++  C++       
Sbjct: 201 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 260

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L  +MV   I P +V  +T++   C+ G  ++A E +  M+  GV+PD ++Y TL++G 
Sbjct: 261 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 320

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
             +  MD+A  +   M  +G  PDVI+Y  ++ G+C+  ++  +  +   M  K   PD 
Sbjct: 321 CLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 380

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TY TL+ G      L++A     EM+ RG +PD
Sbjct: 381 KTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPD 414


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 164/482 (34%), Positives = 254/482 (52%), Gaps = 4/482 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           ALC+  +   A   L  M + G  PD V Y T+I+A   +G + EA  L++ M   G   
Sbjct: 186 ALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAA 245

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V T+N L+ GLC  GR   A  ++D M+  G  P   TY  LL   CR     EA    
Sbjct: 246 DVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEA---- 301

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
           C M  R    ++V  +T+I      G+L RA   +  M S G  PD   Y+I+++G C+ 
Sbjct: 302 CAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKL 361

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G    A++M DEM EKGC  ++VTY+T+L+  CR  M  +A  + ++ML +G   +   +
Sbjct: 362 GRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGY 421

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             +I+  CKDG +++A  L   M  +  KPDI TYNT+I   C    ME+A  ++ ++I 
Sbjct: 422 NGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIE 481

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             +  N I+Y  LI+     G   E  RL  EM+  G +  ++S N +IK  C+ G+  +
Sbjct: 482 EGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDR 541

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           +   L +MV++G+ P++ SYN LIN   +   +  A  L  +M NQGL PD++TYN ++ 
Sbjct: 542 SMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLIN 601

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G C+ G  H +  +L ++  + ++PD  TY  LI+ H     L +A    D+ +  G VP
Sbjct: 602 GLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVP 661

Query: 484 DD 485
           ++
Sbjct: 662 NE 663



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 233/459 (50%), Gaps = 31/459 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL     +  A M L EM   G   D  T+N L+   C  G + EA +L++ M  +G
Sbjct: 218 VIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQG 277

Query: 61  LKPGVFTYNSLINGLCK-------------------------------KGRCDRAKEVLD 89
             P V TY  L+ GLC+                               +G+  RA E+ +
Sbjct: 278 CMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYE 337

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
            M   G  PD  TY+ L+   C+      A  +  EM  +G AP+IV++STL+  F RNG
Sbjct: 338 MMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG 397

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
             D A     +M + G   ++  Y  II   C++G + +A ++  EM  +GC  D+ TYN
Sbjct: 398 MWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYN 457

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T++  LC   ++ EA+ +F  ++E GV  +  T+ TLIH   ++G   + L L   M   
Sbjct: 458 TMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLH 517

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
             + D+++YN LI   CK G ++++  L  +M+++ I PN  SY +LIN  C  G V +A
Sbjct: 518 GCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDA 577

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  EM+ +G+ P +V+ NT+I G C+ G    A   L K+ +E V PD ++YN LI+ 
Sbjct: 578 LELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISW 637

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             +   +D A  L+ K  + G+VP+  T+ +++  F RQ
Sbjct: 638 HCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 221/460 (48%), Gaps = 4/460 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
            V P   +YN +++   R     +A  L   M    + P  FT+      LC+ GR   A
Sbjct: 137 AVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDA 196

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             +L  M + G  PD   Y T++     +  ++EA  +  EM   G A D+ +F+ L+  
Sbjct: 197 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLG 256

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
               G++  A      M + G +P  V Y  ++ G CR     EA  M   + E    ++
Sbjct: 257 LCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPE----VN 312

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VV  NT++ G      L  A +L+  M  +G  PD +T++ L+HG CK G    A+ + D
Sbjct: 313 VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLD 372

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +K   P+IVTY+TL+  FC+ G  + A  +   M+++  S N   Y  +I   C  G
Sbjct: 373 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDG 432

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A RL  EM  +G KP + + NT+I   C +    +A+     ++ EGV  + I+YN
Sbjct: 433 KLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYN 492

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI+  +R     +   L S+M   G   DVI+YN ++   C++G +  S  +L  M+ K
Sbjct: 493 TLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTK 552

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G+ P+  +Y  LIN       +++A     EML +G  PD
Sbjct: 553 GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 592



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 204/399 (51%), Gaps = 5/399 (1%)

Query: 83  RAKEVLDEM-LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           RA  +LD+M  +  +SP   +YN +L    R +  ++A  ++  M R  V P   +F   
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
                R G+   AL   R M   G VPD VLY  +I+     G V EA  + DEML  GC
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             DV T+N ++ GLC    + EA  L + M+ +G  P   T+  L+ G C+    ++A  
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +   + +     ++V  NT+I G    G++ +A +L+  M S+   P+  +Y IL++G C
Sbjct: 304 MLGRLPEV----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
            +G    A R+  EM  KG  P +V+ +T++  +CR+G    A   L +M+++G   +S 
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            YN +I    ++  +D+A  LV +M++QG  PD+ TYN ++   C    M ++E I   +
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IE+G+  +  TY TLI+  +     +E  R   EML  G
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG 518



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 99/188 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL ++ +         EM   G   D ++YN LI A C+EG ++ +  L+  M  KG
Sbjct: 494 LIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG 553

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP  F+YN LIN LCK G+   A E+  EML  GL+PD  TYNTL+   C+      A 
Sbjct: 554 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 613

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  ++    V PDIV+++ LI    +   LD A M   +  S G+VP+   + +++  +
Sbjct: 614 NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673

Query: 181 CRNGFVLE 188
            R    LE
Sbjct: 674 VRQTVNLE 681


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 266/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+    +M  KGV P+ VTY  LI+ Y   G  +E  +++  MS  G
Sbjct: 245 VIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHG 304

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P  FTY  L++ LCKKG+C  A+++ D M++ G+ PD + Y  +L     K  +SE  
Sbjct: 305 LEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMH 364

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M   G++P+   F+ +   F++   +  A+  F +M+  GL P+ V Y  +I+  
Sbjct: 365 SFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDAL 424

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A    ++M+ +G   ++V + +++ GLC      +A +LF EM+ +G+ P+ 
Sbjct: 425 CKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNV 484

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F T++   C +G + KA  L D+M +   +PDI++YN LI G C VG+ ++A+KL   
Sbjct: 485 VFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDI 544

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + PN  +Y  L++GYC  G + +A+ ++ EM+  GI P +V+ NTI+ G  ++  
Sbjct: 545 MLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRR 604

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A E    M++ G      +YN ++NG  +   +D+A  +   + ++ L  D+IT+N+
Sbjct: 605 FSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNI 664

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  D+  +   +   GL PD +TY  +    + + +L+E      EM + G
Sbjct: 665 MIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724

Query: 481 FVPD 484
             P+
Sbjct: 725 CAPN 728



 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 154/484 (31%), Positives = 256/484 (52%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC   ++  A  + L  M + G  P+ V+YNTL+  +C E   EEA +L++ M+  
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 60  GLK---PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            ++   P + +YN++ING   +G+ D+A  +  +M   G+ P+  TY  ++   C+ + +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             AE +F +M  +GV P+IV+++ LI  +   GQ    +   +EM + GL PD   Y ++
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++  C+ G   EA K+ D M+ KG   DV  Y  IL+G      L+E     + M+  G+
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+ Y F  +     K   + +A+++F+ M Q+ + P++V Y TLID  CK+G ++ A  
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
            +  MI+  ++PN + +  L+ G C++    +A  L++EMV +GI P +V  NTI+   C
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
             G   KA   +  M   G  PD ISYN LI G       D+A  L+  M + GL P+  
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN +L G+CR GR+ D+  +   M+  G+ P   TY T+++G        EA   +  M
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615

Query: 477 LQRG 480
           +  G
Sbjct: 616 ITSG 619



 Score =  270 bits (691), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 255/487 (52%), Gaps = 3/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEM---EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++   C +++ + A   L  M   + +   P+ V+YNT+IN +  EG +++A+ L   M+
Sbjct: 172 LLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMT 231

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            +G+ P V TY  +I+GLCK    DRA+ V  +M+  G+ P+  TY  L+          
Sbjct: 232 DQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWK 291

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           E   +  EMS  G+ PD  ++  L+    + G+   A   F  M   G+ PD  +Y II+
Sbjct: 292 EVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIIL 351

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +GY   G + E     D M+  G   +   +N +     +  M+ EA D+FN+M ++G+ 
Sbjct: 352 HGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLS 411

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+   + TLI   CK G ++ A   F+ M  + + P+IV + +L+ G C + + EKA +L
Sbjct: 412 PNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGEL 471

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           + +M+++ I PN + +  ++   C+ G V +A RL   M   G +P ++S N +I+G+C 
Sbjct: 472 FFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCL 531

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A + L  M+S G+ P+  +YNTL++G+ R+  +D A+++  +M + G+ P V+T
Sbjct: 532 VGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVT 591

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN IL G  +  R  +++ +   MI  G      TY  ++NG    N + EA +    + 
Sbjct: 592 YNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLC 651

Query: 478 QRGFVPD 484
            +    D
Sbjct: 652 SKDLQVD 658



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 243/484 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N    + ++D A     +M  +G+ P+ VTY  +I+  C+   ++ A  +   M  KG
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TY  LI+G    G+      +L EM   GL PD  TY  LL   C+K   +EA 
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R+G+ PD+  +  ++  ++  G L     +   M   G+ P++ ++ I+   +
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + EA+ + ++M ++G   +VV Y T+++ LC+   + +A+  FN+M+  GV P+ 
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNI 449

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             FT+L++G C      KA  LF  M  + I P++V +NT++   C  G + KA +L   
Sbjct: 450 VVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDL 509

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P+ ISY  LI G+C +G   EA +L   M+  G+KP   + NT++ GYCR G 
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR 569

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M+S G+ P  ++YNT+++G  +     +A  L   M   G    + TYN+
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL G  +   + ++  +   +  K L  D  T+  +I   +     ++A      +   G
Sbjct: 630 ILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689

Query: 481 FVPD 484
            VPD
Sbjct: 690 LVPD 693



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 210/397 (52%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           A  K   I  A     +M Q+G+ P+ V Y TLI+A C+ G +++A    N M  +G+ P
Sbjct: 388 AFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAP 447

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            +  + SL+ GLC   + ++A E+  EM+  G+ P+   +NT++   C +  + +A+ + 
Sbjct: 448 NIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLI 507

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
             M R G  PDI+S++ LI      G+ D A      M S GL P+   Y  +++GYCR+
Sbjct: 508 DLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRD 567

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +A  +  EML  G    VVTYNTIL+GL + +  +EA +L+  M+  G     YT+
Sbjct: 568 GRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTY 627

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             +++G  K+  +++AL +F  +  K ++ DI+T+N +I    K G  E A  L+A + +
Sbjct: 628 NIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISA 687

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             + P+  +Y ++       G + E   ++ EM   G  P  +  N +++     GD S+
Sbjct: 688 NGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISR 747

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           A  +LSK+  +    ++ + + LI+ F REE+  K+ 
Sbjct: 748 AGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSL 784



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 222/455 (48%), Gaps = 49/455 (10%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLL--VESCRKENMSEAEEI----FCEMSR---RGVA 132
           D A ++ DE L          +N LL  V S  +   S   E+    F  M R     VA
Sbjct: 32  DDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSKVA 91

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYF---------------------------------- 158
           PD+ ++S L+G F R G+L+     F                                  
Sbjct: 92  PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151

Query: 159 ---REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE---KGCVMDVVTYNTIL 212
              R M   G  P+ V Y  ++ G+C      EAL++   M +   + C  ++V+YNT++
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           NG      + +A +LF +M ++G+ P+  T+T +I G CK   +++A  +F  M  K ++
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVR 271

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+IVTY  LI G+  +G+ ++  ++  +M +  + P+  +YG+L++  C  G  TEA +L
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKL 331

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           +  M+ KGIKP +     I+ GY   G  S+   FL  MV  G+ P+   +N +   F +
Sbjct: 332 FDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAK 391

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +  + +A  + +KM  QGL P+V+ Y  ++   C+ GR+ D+EL   +MI +G+ P+   
Sbjct: 392 KAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVV 451

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           +T+L+ G  + +  ++A     EM+ +G  P+  F
Sbjct: 452 FTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVF 486



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 211/412 (51%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL  M   G+ P+   +N +  A+ ++  + EA  + N M  +GL P V  Y +LI+ LC
Sbjct: 366 FLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALC 425

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K GR D A+   ++M+  G++P+   + +L+   C  +   +A E+F EM  +G+ P++V
Sbjct: 426 KLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVV 485

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
            F+T++      G++ +A      M+  G  PD + Y  +I G+C  G   EA K+ D M
Sbjct: 486 FFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIM 545

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           L  G   +  TYNT+L+G CR   + +A  +F EML  G+ P   T+ T++HG  K    
Sbjct: 546 LSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRF 605

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A  L+  M     +  I TYN +++G  K   +++A K++  + S+ +  + I++ I+
Sbjct: 606 SEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIM 665

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I      G   +A  L+  +   G+ P + +   I +     G   + D   S+M   G 
Sbjct: 666 IGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGC 725

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            P+S+  N L+   +   ++ +A A +SK++ +    +  T +++++ F R+
Sbjct: 726 APNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSRE 777



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 171/342 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC   K + A     EM  +G++P+ V +NT++   C EG + +A +L++ M   G
Sbjct: 455 LVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVG 514

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + +YN+LI G C  G+ D A ++LD ML +GL P+  TYNTLL   CR   + +A 
Sbjct: 515 TRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAY 574

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM   G+ P +V+++T++    +  +   A   +  M ++G       Y II+NG 
Sbjct: 575 SVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGL 634

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +N  V EALKM   +  K   +D++T+N ++  L +     +A +LF  +   G+ PD 
Sbjct: 635 SKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDV 694

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +     ++G++ +   +F  M +    P+ +  N L+      G++ +A    + 
Sbjct: 695 TTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSK 754

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +  +  S    +  +LI+ +    H  ++    Y  + +  K
Sbjct: 755 IDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYHFLNEAKK 796


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 262/484 (54%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK  K+  A +   ++ Q  + PD  TY +LI  +CR   L++AF++ + M   G
Sbjct: 203 MINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDG 262

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY++LINGLC +GR   A ++L+EM + G+ P   TY   +   C    + +A 
Sbjct: 263 CNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAI 322

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M ++G +P + +++ +I    R G+++ A+  + +M   GLVP+ V Y  +IN  
Sbjct: 323 NLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINEL 382

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G    ALK+ D M   G + +  TYN I+ GL     + +A  +FN+ML+ G  P  
Sbjct: 383 CTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTV 442

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI  + K G +N A     +M + + +PD  TY  LI GFCK G+++ A   + +
Sbjct: 443 VTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYE 502

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   ISPN  +Y  +I+GYC  G +  A  L+  M   G   ++ + N II G  +   
Sbjct: 503 MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNR 562

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A++F +KM  +G+ P++I+Y +LING  +    + AF +  +ME +  +P+  TY  
Sbjct: 563 FSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTS 622

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G++  +E    R+ E G  P   TY+TL++G   +    EA +  + M ++G
Sbjct: 623 LIYGLCQEGKVDAAE----RLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKG 678

Query: 481 FVPD 484
             P 
Sbjct: 679 LSPS 682



 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 235/453 (51%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           ++NTL+    +   +  A  +   +   G+KP + T+N++IN LCKKG+   A  V +++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
            Q  L PD  TY +L++  CR   + +A E+F  M + G  P+ V++STLI      G++
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
             A+    EM   G+ P    YT+ I+  C  G V +A+ +   M +KGC   V TY  I
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++GL RA  +  A  ++++ML+ G+ P+  T+  LI+  C +G    AL +FD M     
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
             +  TYN +I G   + ++EKA  ++  M+    SP  ++Y  LI      G++  A R
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATR 463

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
             Y M     +P   +   +I G+C+ G    A  F  +M+  G+ P+  +Y  +I+G+ 
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYC 523

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +E  +D A +L  +ME  G    + TYN I++G  +  R  ++E    +M E+GL P+  
Sbjct: 524 KEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTI 583

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TYT+LING         AF+   EM ++  +P+
Sbjct: 584 TYTSLINGLCKNTATNLAFKIFHEMEKKNCLPN 616



 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 247/485 (50%), Gaps = 6/485 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + +I  A   L EM +KG+ P   TY   I++ C  G +++A  L+ SM  KG
Sbjct: 273 LINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKG 332

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY ++I+GL + G+ + A  +  +ML+ GL P+T TYN L+ E C +     A 
Sbjct: 333 CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIAL 392

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +IF  M   G   +  +++ +I G+F  +  +++A++ F +M   G  P  V Y  +I  
Sbjct: 393 KIFDWMEGHGTLANAQTYNQIIKGLFGMD-DIEKAMVVFNKMLKDGPSPTVVTYNTLIVE 451

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G++  A +    M E  C  D  TY  +++G C+   L  A   F EML+ G+ P+
Sbjct: 452 NLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPN 511

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+T +I G+CK+G ++ AL+LF+ M +      I TYN +I G  K     +A K  A
Sbjct: 512 QWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCA 571

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  + + PN I+Y  LING C       AF++++EM  K   P   +  ++I G C+ G
Sbjct: 572 KMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEG 631

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A+    ++   G +P   +Y+TL++G  RE   ++A  LV  M+ +GL P +  Y 
Sbjct: 632 KVDAAE----RLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYC 687

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L   C+  ++  +  I   M  KG  P    Y  LI      +  +EA      +L++
Sbjct: 688 SLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKK 747

Query: 480 GFVPD 484
            +  D
Sbjct: 748 QWNSD 752



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 234/459 (50%), Gaps = 10/459 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +  K++ A     +M ++G+ P+TVTYN LIN  C EG    A ++ + M G G
Sbjct: 343 IISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHG 402

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 TYN +I GL      ++A  V ++ML+ G SP   TYNTL+VE+ ++  ++ A 
Sbjct: 403 TLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNAT 462

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M      PD  ++  LI  F + G+LD A  +F EM   G+ P+   YT +I+GY
Sbjct: 463 RFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGY 522

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  AL + + M E GC   + TYN I++GL +    +EA+    +M E+G+ P+ 
Sbjct: 523 CKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNT 582

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI+G CK+   N A  +F  M +K+  P+  TY +LI G C+ G+++ A +L  +
Sbjct: 583 ITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN 642

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
                  P   +Y  L++G C  G   EA +L   M  KG+ P++    +++  +C+S  
Sbjct: 643 ----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLK 698

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E  + M  +G  P    Y  LI         ++A  +   +  +    D+I + V
Sbjct: 699 VDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTV 758

Query: 421 ILTGFCRQGRMHDSEL---ILWRMIEKGLNPDRSTYTTL 456
           ++ G  ++G   DS+L    L+ M  +   P   TY  L
Sbjct: 759 LVDGLLQEG---DSDLCMKFLYLMESRNCTPSLHTYIIL 794



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 183/361 (50%), Gaps = 4/361 (1%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +++A  FL  M++    PD  TY  LI+ +C+ G L+ A      M   G+ P  +TY +
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +I+G CK+G+ D A  + + M + G S    TYN ++    +    SEAE+   +M+ +G
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + P+ +++++LI    +N   + A   F EM+    +P+   YT +I G C+ G V  A 
Sbjct: 578 LQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA- 636

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
              + + E GC   + TY+T+++GLCR     EA  L   M E+G+ P    + +L+  H
Sbjct: 637 ---ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAH 693

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK   ++ AL +F++M  K  +P +  Y  LI   C V   E+A  ++  ++ ++ + + 
Sbjct: 694 CKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDL 753

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           I + +L++G    G      +  Y M  +   P+L +   + +   + G +   D+  ++
Sbjct: 754 IVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNR 813

Query: 371 M 371
           +
Sbjct: 814 L 814



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 164/335 (48%), Gaps = 35/335 (10%)

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V  A  +  ++   G    ++T+NT++N LC+   + EA  +FN++ +  + PD +T+T+
Sbjct: 178 VTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTS 237

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI GHC++  ++KA  +FD M +    P+ VTY+TLI+G C  G + +A  +  +M  + 
Sbjct: 238 LILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG 297

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I P   +Y + I+  C +G V +A  L   M  KG  P++ +   II G  R+G    A 
Sbjct: 298 IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAI 357

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVRE-------------------------------- 393
               KM+ EG+ P++++YN LIN    E                                
Sbjct: 358 GMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGL 417

Query: 394 ---ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
              ++++KA  + +KM   G  P V+TYN ++    ++G ++++   L+ M E    PD 
Sbjct: 418 FGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDE 477

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            TY  LI+G      L  A  F  EML+ G  P+ 
Sbjct: 478 RTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQ 512



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 4/233 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+   + A     EME+K   P+  TY +LI   C+EG ++ A +L  +    G
Sbjct: 588 LINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN----G 643

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TY++L++GLC++GR + A ++++ M + GLSP    Y +LLV  C+   +  A 
Sbjct: 644 CEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCAL 703

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF  M+ +G  P +  +  LI       + + AL  F+ +       D +++T++++G 
Sbjct: 704 EIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGL 763

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            + G     +K    M  + C   + TY  +   L +       D + N + E
Sbjct: 764 LQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLRE 816



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 76/140 (54%)

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           TL S NT++    +    + A    +++ S GV P  +++NT+IN   ++  + +A  + 
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           +K+    L PD  TY  ++ G CR  ++  +  +  RM++ G NP+  TY+TLING  ++
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280

Query: 464 NNLKEAFRFHDEMLQRGFVP 483
             + EA    +EM ++G  P
Sbjct: 281 GRIGEAMDMLEEMTEKGIEP 300


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 153/459 (33%), Positives = 258/459 (56%), Gaps = 2/459 (0%)

Query: 28  PDTVTYNTLINAYCR--EGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           P  V +N ++ +  +        A  L + +  KG+ P + T+N L+N  C  G    A 
Sbjct: 55  PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  ++L++G  P T T+NTL+   C    + EA      +   G   D VS+ TLI   
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G+   AL   ++++   +  D V+Y IIIN  C++  V +A ++  EM+ K    DV
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDV 234

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT+N+++ G C    L EA  LF+EM+ + + PD YTF+ L+   CKDGN+ +A N+  +
Sbjct: 235 VTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAV 294

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++ + PD+VTY++L+DG+C V E+ KA  +++ M    ++P+  SY I+ING   +  
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V EA  L+ EM  KGI P  V+ N++I G C+ G  S A + + +M + G+  D ++YN+
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+   +  ++DKA ALV K+++QG+ P + TYN+++ G C+ GR+ +++ +   ++ KG
Sbjct: 415 LIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG 474

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            + +  TY  +ING   +    EA     +M   G +PD
Sbjct: 475 YSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPD 513



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 252/446 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN  C   ++  A     ++ + G +P T+T+NTLIN  C  G L+EA    + +   G
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +Y +LINGLCK G    A ++L ++    ++ D   YN ++   C+ + +S+A 
Sbjct: 160 FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAY 219

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM  + ++PD+V+F++LI  F   GQL  A   F EM    + PD   ++I+++  
Sbjct: 220 QLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDAL 279

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  A  M   M+++G + DVVTY+++++G C    + +A  +F+ M   GV P  
Sbjct: 280 CKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHA 339

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  +I+G  K   +++AL+LF  M  K I PD VTYN+LIDG CK+G +  A +L  +
Sbjct: 340 HSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDE 399

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  I  + ++Y  LI+  C   H+ +A  L  ++  +GI+P++ + N +I G C+ G 
Sbjct: 400 MHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGR 459

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +    ++ +G   ++ +YN +ING  +E   ++A  L+SKMEN G++PD +TY  
Sbjct: 460 LKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYET 519

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           I+    R+     +E +L  MI +GL
Sbjct: 520 IIRALFRKDENEKAEKLLREMIIRGL 545



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/412 (33%), Positives = 224/412 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N +C + K+  A  F   +   G + D V+Y TLIN  C+ G    A Q++  + GK 
Sbjct: 135 LINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKL 194

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V  YN +IN LCK      A ++  EM+   +SPD  T+N+L++  C    + EA 
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  + + PD+ +FS L+    ++G + RA      M   G++PD V Y+ +++GY
Sbjct: 255 GLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGY 314

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V +A  +   M   G      +YN ++NGL + KM+ EA  LF EM  +G+ PD 
Sbjct: 315 CLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDT 374

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G CK G ++ A  L D M    I  DI+TYN+LID  CK   ++KA  L   
Sbjct: 375 VTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKK 434

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + I P+  +Y ILI+G C  G +  A  ++ +++ KG      + N +I G C+ G 
Sbjct: 435 IKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGL 494

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            ++A+  LSKM + G+ PD+++Y T+I    R++  +KA  L+ +M  +GL+
Sbjct: 495 FNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 112/203 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N L K   +D A     EM  KG+ PDTVTYN+LI+  C+ G +  A+QL++ M   G
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   + TYNSLI+ LCK    D+A  ++ ++   G+ P   TYN L+   C+   +  A+
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F ++  +G + +  +++ +I    + G  + A +   +M++ G++PD V Y  II   
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524

Query: 181 CRNGFVLEALKMRDEMLEKGCVM 203
            R     +A K+  EM+ +G ++
Sbjct: 525 FRKDENEKAEKLLREMIIRGLLL 547


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 150/470 (31%), Positives = 258/470 (54%), Gaps = 1/470 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C   ++  A   L ++ + G  PD  T+NTLI   C EG + EA  L +   G+G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +L+NGLCK G    A  +L  M+Q    P+   YNT++   C+   ++EA 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G++PDI ++++LI       +         EM ++ ++P+ V+++ +++  
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A  + D M+++G   DVVTY  +++G C    + EA  +F+ M+ +G  P+ 
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LI+G+C+   M+KA+ L + M+ + +  D VTYNTLI G C VG ++ A  L+ +
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    P+ ++Y IL++  C   H+ EA  L   + G  +   ++  N  I G CR+G+
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ PD  +YN +I+G  +   +D+A  L  KM+  G   D   YN 
Sbjct: 551 LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNT 610

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           I+ GF R      +  +L  M+ +G + D ST TTLI   +S + L ++F
Sbjct: 611 IIRGFLRSNETFGATQLLQEMLAEGFSADVST-TTLIVEMLSDDGLDQSF 659



 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 251/465 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ PD  T N LIN++C    L  AF ++  +   G +P   T+N+LI GLC +G
Sbjct: 175 QMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEG 234

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+ +  G  PD  TY TL+   C+  N S A  +   M ++   P++++++
Sbjct: 235 KIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYN 294

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++ Q+  A   F EM + G+ PD   Y  +I+  C          + +EM+  
Sbjct: 295 TIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 354

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + +VV ++T+++ LC+  M+  A D+ + M++RGV PD  T+T L+ GHC    M++A
Sbjct: 355 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 414

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD M  K   P++ +YN LI+G+C++  M+KA  L   M  + +  + ++Y  LI+G
Sbjct: 415 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 474

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G +  A  L++EMV  G  P LV+   ++   C++   ++A   L  +    +D D
Sbjct: 475 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 534

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            + YN  I+G  R   ++ A  L S + ++GL PDV TYN+++ G C++G + ++  +  
Sbjct: 535 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFR 594

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +M E G + D   Y T+I G +  N    A +   EML  GF  D
Sbjct: 595 KMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSAD 639



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 232/453 (51%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P TV +  L+ +  +         L   M   G+ P V+T N LIN  C   R   A  V
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  PD  T+NTL+   C +  + EA  +F +    G  PD+V++ TL+    +
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+   R M      P+ + Y  II+  C++  V EA  +  EM+ KG   D+ T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN++++ LC          L NEM+   + P+   F+T++   CK+G +  A ++ D+M 
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ ++PD+VTY  L+DG C   EM++A K++  M+ +   PN  SY ILINGYC +  + 
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  +M  +G+    V+ NT+I G C  G    A     +MV+ G  PD ++Y  L+
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +  ++ +A  L+  +E   L  D++ YN+ + G CR G +  +  +   +  KGL 
Sbjct: 508 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQ 567

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           PD  TY  +I+G   +  L EA +   +M + G
Sbjct: 568 PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENG 600



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 220/439 (50%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L++A    N M      P    +  L+  + K         +  +M   G+ PD  T N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   C    +  A  +  ++ + G  PD  +F+TLI      G++  AL  F +    G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             PD V Y  ++NG C+ G    A+++   M++K C  +V+ YNTI++ LC+ + +TEA 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +LF+EM+ +G+ PD +T+ +LIH  C          L + M    I P++V ++T++D  
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK G +  A+ +   MI R + P+ ++Y  L++G+C    + EA +++  MV KG  P +
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            S N +I GYC+     KA   L +M  +G+  D+++YNTLI+G      +  A AL  +
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M   G +PD++TY ++L   C+   + ++ ++L  +    L+ D   Y   I+G      
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           L+ A      +  +G  PD
Sbjct: 551 LEAARDLFSNLSSKGLQPD 569


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 149/457 (32%), Positives = 257/457 (56%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +  ++ +  +    + A  L   M   G+KP   T N L+N   + G    +  V
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++L+ G  PD  T+  L+   C K  + +A     ++  +G   D VS+ TLI    R
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+   A+   R +    + P+ V+Y+ II+  C++  V +A  +  EM+ K    DVVT
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+++++G C    L  A DLFN M+   + P+ YTF+ LI G CK+G + +A N+  +M 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +K++K D+VTYN+L+DG+C V ++ KA  L+  M  R ++P+  SY I+ING+C +  V 
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA +L+ EM  K I P +V+ N+++ G C+SG  S A E + +M   G   + I+YN+++
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +  ++DKA  L++K++ +G+ PD+ TY V++ G C+ GR+ D++ +   ++ KG +
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TYT+LING  ++    E      +M   G +P+
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512



 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 247/424 (58%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +KG +PD VT+  LI   C +G + +A    + +  +G +    +Y +LINGLC+ G   
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETK 180

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A ++L  +    + P+   Y+T++   C+ + +++A +++CEM  + ++PD+V++S+LI
Sbjct: 181 AAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLI 240

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F   G+L  A+  F  M S  + P+   ++I+I+G+C+ G V EA  +   M++K   
Sbjct: 241 SGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVK 300

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           +DVVTYN++++G C  K + +A  LFN M +RGV PD ++++ +I+G CK   +++A+ L
Sbjct: 301 LDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKL 360

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M  K I P++VTYN+L+DG CK G    A +L  +M  R    N I+Y  +++  C 
Sbjct: 361 FEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICK 420

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
             HV +A  L  ++  KGI+P + +   +I G C+ G    A +    ++ +G  P+  +
Sbjct: 421 NNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYT 480

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y +LINGF  +   D+  A++SKM++ G +P+ ITY +++     +     +E +L  MI
Sbjct: 481 YTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMI 540

Query: 443 EKGL 446
            +GL
Sbjct: 541 ARGL 544



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 260/482 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +L K  +  +A     +ME  G+ PD +T N L+N + + G ++ +F +   +  KG
Sbjct: 64  ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+  LI GLC KG   +A    D+++  G   D  +Y TL+   CR      A 
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   +  + V P++V +ST+I    ++  ++ A   + EM S  + PD V Y+ +I+G+
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A+ + + M+      +V T++ +++G C+   + EA ++   M+++ V  D 
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+ G+C    +NKA +LF++M Q+ + PD+ +Y+ +I+GFCK+  +++A KL+ +
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  ++I PN ++Y  L++G C  G  + A  L  EM  +G    +++ N+I+   C++  
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNH 423

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L+K+  +G+ PD  +Y  LING  +   +D A  +   +  +G  P++ TY  
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC +G   +   +L +M + G  P+  TY  LI+    ++   +A +   EM+ RG
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543

Query: 481 FV 482
            +
Sbjct: 544 LL 545


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 162/486 (33%), Positives = 268/486 (55%), Gaps = 5/486 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC  +++DSA   L +M + G  P+++ Y TLI+A  ++  + EA +L+  M   G
Sbjct: 224 VMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG 283

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+N +I+GLCK  +   A +++D ML  G  PD  TY  LL   CR   ++EA 
Sbjct: 284 CMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEAR 343

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-MKSAGLVPDNVLYTIIING 179
           +I  ++      P+    +TLI  +  +GQL  A  +  E M + G  PD   Y I+++G
Sbjct: 344 KILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHG 399

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G +  A  + +EM  +GC  +V+TY  ++NGLC+A +L EA  + +EM  RG+  +
Sbjct: 400 LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTIN 459

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  LI   C+   ++ ALNL   M  K  KPD+ TYN+LI G CKV  +++A +L+ 
Sbjct: 460 SVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFH 519

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+      N ++Y  LI+     G   +A  L  +M+ +G     ++ N +IK +C+ G
Sbjct: 520 NMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVG 579

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  K  E   +M+ +G+  D+IS N +ING  +   +D AF  +    N+G VPD++TYN
Sbjct: 580 NIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYN 639

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L G C+ GR+ ++  +  R+  +G+ PD  TY T I+    +  + +A  F    ++ 
Sbjct: 640 SVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIEN 699

Query: 480 GFVPDD 485
           GFVP +
Sbjct: 700 GFVPSN 705



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/439 (33%), Positives = 237/439 (53%), Gaps = 5/439 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK +KI  A   +  M  +G YPD +TY  L++  CR G L EA +++  +    
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC-- 351

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDE-MLQMGLSPDTATYNTLLVESCRKENMSEA 119
             P     N+LING    G+   A+  L+E M+  G  PD  TYN L+   C++ ++S A
Sbjct: 352 --PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  EMSRRG  P++++++ L+    + G L+ A +   EM + GL  ++V+Y  +I  
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICA 469

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR   V  AL +  EM  KGC  D+ TYN+++ GLC+   + EA  LF+ ML  G   +
Sbjct: 470 LCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIH   + G   KAL L + M  +    D +TYN LI  FCKVG +EK  +L+ 
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            MI   +  + IS  I+ING C +G V  AF    + + +G  P +V+ N+++ G C+ G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A     ++  EGV PD+ +YNT I+   +E  ++ A +   +    G VP  +T+N
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWN 709

Query: 420 VILTGFCRQGRMHDSELIL 438
           V++    +Q    ++  +L
Sbjct: 710 VLVYTLLKQSNQENNFFVL 728



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 231/495 (46%), Gaps = 33/495 (6%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           QKG       Y   IN     G  +   +L+  M  +G+      +  ++    K G+  
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTL 141
           +A  +L +M  + L   T     L++E     N  + A  +F +M  +GV+P + +F  +
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           +       ++D A    R+M   G VP++++Y  +I+   +   V EALK+ +EM   GC
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGC 284

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + DV T+N +++GLC+   + +A  L + ML RG +PD  T+  L+HG C+ G +N+A  
Sbjct: 285 MPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344

Query: 262 LF--------------------------------DIMTQKSIKPDIVTYNTLIDGFCKVG 289
           +                                 + M     +PDI TYN L+ G CK G
Sbjct: 345 ILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +  A  L  +M  R   PN I+Y IL+NG C  G + EA  + +EM  +G+    V  N
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I   CR      A   LS+M ++G  PD  +YN+LI G  + + +D+AF L   M   
Sbjct: 465 CLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLD 524

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G V + +TYN ++    R+G    +  ++  M+ +G   D+ TY  LI       N+++ 
Sbjct: 525 GAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKG 584

Query: 470 FRFHDEMLQRGFVPD 484
              +++M+  G   D
Sbjct: 585 LELYEQMIMDGLGAD 599



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 1/210 (0%)

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            Y   I+    +G+ +  +KL   M    I      + I++  Y   G   +A RL  +M
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 337 VGKGI-KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
               + +PT  S + +++          A      M+S+GV P   ++  ++        
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +D A +L+  M   G VP+ I Y  ++    ++ ++ ++  +L  M   G  PD  T+  
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +I+G    N + +A +  D ML RGF PD+
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDN 323


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 151/457 (33%), Positives = 258/457 (56%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +N +++++ +      A  L + +  KG++P + T N LIN  C  G+      V
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L+ G  PDT T NTL+   C K  + +A     ++  +G   + VS++TLI    +
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+ + R++      PD V+Y  II+  C+   V EA  +  EM  KG   DVVT
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++ G C    L EA  L NEM+ + + P+ YT+  L+   CK+G + +A ++  +M 
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  +KPD++TY+TL+DG+  V E++KA  ++  M    ++P+  +Y ILING+C    V 
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+ EM  K + P +V+ +++I G C+SG  S   + + +M   G   D I+Y++LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  +  ++D+A AL +KM++Q + P++ T+ ++L G C+ GR+ D++ +   ++ KG +
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  TY  +INGH  Q  L+EA     +M   G +P+
Sbjct: 477 LNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/447 (33%), Positives = 251/447 (56%), Gaps = 2/447 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I      L ++ ++G  PDTVT NTLI   C +G +++A    + +  +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +LING+CK G    A + L ++      PD   YNT++   C+ + +SEA 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ +G++ D+V+++TLI  F   G+L  A+    EM    + P+   Y I+++  
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 181 CRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G V EA  +   ML K CV  DV+TY+T+++G      + +A  +FN M   GV PD
Sbjct: 280 CKEGKVKEAKSVLAVML-KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+T LI+G CK+  +++ALNLF  M QK++ P IVTY++LIDG CK G +     L  
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLID 398

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R    + I+Y  LI+G C  GH+  A  L+ +M  + I+P + +   ++ G C+ G
Sbjct: 399 EMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGG 458

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A E    ++++G   +  +YN +ING  ++  +++A  ++SKME+ G +P+  T+ 
Sbjct: 459 RLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFE 518

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGL 446
            I+    ++     +E +L +MI +GL
Sbjct: 519 TIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 245/463 (52%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            +E KG+ PD +T N LIN +C  G +   F ++  +  +G  P   T N+LI GLC KG
Sbjct: 84  RLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A    D++L  G   +  +Y TL+   C+  +   A +   ++  R   PD+V ++
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYN 203

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    +   +  A   F EM   G+  D V Y  +I G+C  G + EA+ + +EM+ K
Sbjct: 204 TIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK 263

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               +V TYN +++ LC+   + EA  +   ML+  V PD  T++TL+ G+     + KA
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            ++F+ M+   + PD+ TY  LI+GFCK   +++A  L+ +M  + + P  ++Y  LI+G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G ++  + L  EM  +G    +++ +++I G C++G   +A    +KM  + + P+
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             ++  L++G  +   +  A  +   +  +G   +V TYNV++ G C+QG + ++  +L 
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLS 503

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +M + G  P+  T+ T+I     ++   +A +   +M+ RG +
Sbjct: 504 KMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 209/403 (51%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D A    + ML M  +P    +N +L    + ++ S A  +   +  +G+ PD+++ + L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F   GQ+        ++   G  PD V    +I G C  G V +AL   D++L +G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
            ++ V+Y T++NG+C+      A     ++  R   PD   + T+I   CK   +++A  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           LF  M  K I  D+VTYNTLI GFC VG++++A  L  +M+ + I+PN  +Y IL++  C
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G V EA  +   M+   +KP +++ +T++ GY    +  KA    + M   GV PD  
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y  LINGF + + +D+A  L  +M  + +VP ++TY+ ++ G C+ GR+     ++  M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++G   D  TY++LI+G     +L  A    ++M  +   P+
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 195/368 (52%), Gaps = 2/368 (0%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           +N+ +A   F  M      P I+ F+ ++  F++      A+     ++  G+ PD +  
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            I+IN +C  G +     +  ++L++G   D VT NT++ GLC    + +A    +++L 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           +G   +  ++ TLI+G CK G+   A+     +  +  KPD+V YNT+ID  CK   + +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L+++M  + IS + ++Y  LI G+C +G + EA  L  EMV K I P + + N ++ 
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C+ G   +A   L+ M+   V PD I+Y+TL++G+     + KA  + + M   G+ P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 414 DVITYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           DV TY +++ GFC+  +M D  L L++ M +K + P   TY++LI+G      +   +  
Sbjct: 338 DVHTYTILINGFCKN-KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 473 HDEMLQRG 480
            DEM  RG
Sbjct: 397 IDEMRDRG 404



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 170/333 (51%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D A+  F  M      P  + +  I++ + +      A+ +   +  KG   D++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++N  C    +T    +  ++L+RG  PD  T  TLI G C  G + KAL+  D +  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            + + V+Y TLI+G CK+G+   A K    +  R   P+ + Y  +I+  C    V+EA+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L+ EM  KGI   +V+ NT+I G+C  G   +A   L++MV + ++P+  +YN L++  
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +E  + +A ++++ M    + PDVITY+ ++ G+     +  ++ +   M   G+ PD 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            TYT LING      + EA     EM Q+  VP
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 130/253 (51%), Gaps = 6/253 (2%)

Query: 238 PDFYTF---TTLIHGHCKD---GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           P+F +F   ++  H H +     N++ A++ F+ M      P I+ +N ++D F K+   
Sbjct: 16  PNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY 75

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
             A  L   +  + I P+ I+  ILIN +C MG +T  F +  +++ +G  P  V+ NT+
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTL 135

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           IKG C  G   KA  F  K++++G   + +SY TLING  +  +   A   + K++ +  
Sbjct: 136 IKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLT 195

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            PDV+ YN I+   C+   + ++  +   M  KG++ D  TY TLI G      LKEA  
Sbjct: 196 KPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIG 255

Query: 472 FHDEMLQRGFVPD 484
             +EM+ +   P+
Sbjct: 256 LLNEMVLKTINPN 268


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 153/485 (31%), Positives = 259/485 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K+ K+ +  +F  EM  + V PD  T+N LIN  C EG L++A  L+  M   G
Sbjct: 139 LLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESG 198

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+++N  CKKGR   A E++D+M   G+  D  TYN L+ + C+    ++  
Sbjct: 199 YVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGY 258

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +R ++P+ ++++++I  F + G++  A   F+EM    L+P+ V Y  +I+G+
Sbjct: 259 LLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGH 318

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G   +AL + + M   G   + V+Y+ +LNGLCR      +  +   M   G+    
Sbjct: 319 CHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGC 378

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I G C++G +N+++ L D M +  + PD+VT++ LI+GFC+VG+++   ++   
Sbjct: 379 IAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICK 438

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    ++PN I Y  LI  YC  G V EAF+++  M   G       CN ++   C+ G 
Sbjct: 439 MYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGK 498

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A+ F   M   G  P+SI+++ +ING+    N  KAF++  +M   G  P   TY  
Sbjct: 499 VGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGG 558

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L   CR G+  +++ +L ++       D  TY T++        L +A    DEM+QR 
Sbjct: 559 LLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618

Query: 481 FVPDD 485
            +PD 
Sbjct: 619 VLPDS 623



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 261/520 (50%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + K+  A   L +ME+ G  P  VTYNT++N YC++G  + A +L++ M  KG
Sbjct: 174 LINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKG 233

Query: 61  LK-----------------------------------PGVFTYNSLINGLCKKGRCDRAK 85
           ++                                   P   TYNS+ING  K+G+   A 
Sbjct: 234 IEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAAT 293

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  EM  + L P+  TYN L+   C   N  +A  I   M   G  P+ VS+S L+   
Sbjct: 294 RIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGL 353

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R+ + + +      M+  G++   + YT +I+G CRNG + E++K+ D+ML+ G V DV
Sbjct: 354 CRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDV 413

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT++ ++NG CR   +    ++  +M + G+ P+   +TTLI+ +CK G++ +A  ++  
Sbjct: 414 VTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVA 473

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M++     +    N L+   CK G++  A   +  M      PN I++  +INGY + G+
Sbjct: 474 MSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGN 533

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +AF ++ EM+  G  P+  +   ++K  CR+G   +A   L K+       D+++YNT
Sbjct: 534 GLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNT 593

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           ++    +   +  A AL  +M  + ++PD  TY +I  G  R+G+M  +      ++ KG
Sbjct: 594 ILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKG 653

Query: 446 -LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++P++  YTT ++G       K A  F ++M + G   D
Sbjct: 654 AVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCAD 693



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 275/558 (49%), Gaps = 72/558 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+  K + +K  L  M   G+    + Y  +I+  CR G L E+ +L++ M   G
Sbjct: 349 LLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDG 408

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T++ LING C+ G+    KE++ +M + GL+P++  Y TL+   C+  ++ EA 
Sbjct: 409 VVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAF 468

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++  MSR G   +    + L+    ++G++  A  +F  M   G VP+++ +  IINGY
Sbjct: 469 KVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGY 528

Query: 181 CRNGFVLEALKMRDEMLEKG-----------------------------------CVMDV 205
             +G  L+A  M DEM++ G                                     +D 
Sbjct: 529 GNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDT 588

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-D 264
           VTYNTIL    ++ MLT+A  LF+EM++R V PD YT+  +  G  + G M  AL+ + +
Sbjct: 589 VTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGN 648

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKA---------NKLWADMISRK---------- 305
           ++ + ++ P+ V Y T +DG  + G+ + A         N L AD+I+            
Sbjct: 649 LLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMG 708

Query: 306 -----------------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
                            ISP+  +Y IL++GY    ++++   L+  M+  GI P  ++C
Sbjct: 709 KMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTC 768

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           +++I G+C+S       + L KM+ +GV  D  ++N LI  +   + + KAF LV+ M  
Sbjct: 769 HSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNL 828

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
             + PD+ T++ I++   R   + +S L+L  M+E+G  PDR  Y  L+N      ++  
Sbjct: 829 FDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHG 888

Query: 469 AFRFHDEMLQRGFVPDDA 486
           AF+  DEM   G    D 
Sbjct: 889 AFKLKDEMEALGISSGDV 906



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 253/478 (52%), Gaps = 2/478 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V++LCKD K+  A+ F   M + G  P+++T++ +IN Y   G   +AF + + M   G
Sbjct: 489 LVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAG 548

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY  L+  LC+ G+   AK +LD++  +  + DT TYNT+LVE+ +   +++A 
Sbjct: 549 HHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAV 608

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV-PDNVLYTIIING 179
            +F EM +R V PD  +++ +     R G++  AL ++  +   G V P+ V+YT  ++G
Sbjct: 609 ALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDG 668

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER-GVFP 238
             R G    AL   ++M + G   D++  N ILNG  R   + +A D+F  M     + P
Sbjct: 669 LFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISP 728

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
              T+  L+HG+ K  N++K  NL++IM +  I PD +T ++LI GFCK   ++   KL 
Sbjct: 729 SLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLL 788

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+   ++ +  ++ +LI  YC    V +AF L   M    I P + + ++II    R 
Sbjct: 789 KKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRV 848

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               ++   L +M+  G  PD   Y  L+N   R  ++  AF L  +ME  G+    +  
Sbjct: 849 STVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAE 908

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           + ++ G  + G++ +++L+L  M+ K L P  +T+TTL++      +L EA +  D M
Sbjct: 909 SALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTM 966



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 245/494 (49%), Gaps = 26/494 (5%)

Query: 12  DSAKMFLCEMEQKGV------------YP----DTVTYNTLINAYCREGFLEEAFQLMNS 55
           ++AK  L  + Q GV            YP    +   ++ LI  Y REG + +A +    
Sbjct: 64  ENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRL 123

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M  +G  P V+T N L+  L K+ +         EML   + PD +T+N L+   C +  
Sbjct: 124 MGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGK 183

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + +A  +  +M   G  P +V+++T++  + + G+   AL    +M S G+  D   Y +
Sbjct: 184 LKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNM 243

Query: 176 IINGYCRN-----GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           +++  C+N     G++L   KMR  M+      + +TYN+I+NG  +   +  A  +F E
Sbjct: 244 LVDDLCKNNRSAKGYLLLK-KMRKRMISP----NEITYNSIINGFVKEGKIGAATRIFQE 298

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           M    + P+  T+  LI GHC DGN  +AL + ++M     KP+ V+Y+ L++G C+  +
Sbjct: 299 MSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAK 358

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
            E +  +   M    +    I+Y  +I+G C  G + E+ +L  +M+  G+ P +V+ + 
Sbjct: 359 FELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSV 418

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I G+CR G      E + KM   G+ P+SI Y TLI  + +  ++ +AF +   M   G
Sbjct: 419 LINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIG 478

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
              +    NV+++  C+ G++  +E     M + G  P+  T+  +ING+ +  N  +AF
Sbjct: 479 YDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAF 538

Query: 471 RFHDEMLQRGFVPD 484
              DEM++ G  P 
Sbjct: 539 SMFDEMIKAGHHPS 552



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 155/294 (52%)

Query: 26   VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
            + P   TYN L++ Y ++  L +   L N M   G+ P   T +SLI G CK    D   
Sbjct: 726  ISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGL 785

Query: 86   EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            ++L +ML  G++ D  T+N L+++ C  + + +A ++   M+   + PD+ +  ++I + 
Sbjct: 786  KLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVL 845

Query: 146  SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            SR   +  + +   EM   G +PD   Y  ++N  CR G +  A K++DEM   G     
Sbjct: 846  SRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGD 905

Query: 206  VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            V  + ++ GL +   + EA  + + ML + + P   TFTTL+H  C++ ++ +AL L D 
Sbjct: 906  VAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDT 965

Query: 266  MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            M    +K D++ YN LI G C  G++  A KL+ ++  R + PN  +Y ILI+ 
Sbjct: 966  MDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDA 1019



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 180/366 (49%), Gaps = 3/366 (0%)

Query: 14   AKMFLCE-MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGKGLKPGVFTYNSL 71
            A ++ CE ME+ G+  D +  N ++N Y R G + +A  +   M SG  + P + TYN L
Sbjct: 677  AALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNIL 736

Query: 72   INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
            ++G  KK    +   + + M++ G+ PD  T ++L++  C+   +    ++  +M   GV
Sbjct: 737  LHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGV 796

Query: 132  APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            A D  +F+ LI  +    ++ +A      M    + PD   +  II+   R   V E+  
Sbjct: 797  AVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHL 856

Query: 192  MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
            +  EMLE+GC+ D   Y  ++N +CR   +  A  L +EM   G+       + L+ G  
Sbjct: 857  LLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLA 916

Query: 252  KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
            K G + +A  + D M +KS+ P I T+ TL+  FC+   + +A KL   M    +  + I
Sbjct: 917  KCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVI 976

Query: 312  SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS-CNTIIKGYCRSGDASKADEFLSK 370
            +Y +LI+G C+ G V  A +L+ E+  +G+ P + + C  I   +      +K +  L  
Sbjct: 977  AYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKD 1036

Query: 371  MVSEGV 376
            +   GV
Sbjct: 1037 LQERGV 1042



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 140/288 (48%), Gaps = 16/288 (5%)

Query: 215 LCRAKMLTEADDLFNEMLERGV------------FP----DFYTFTTLIHGHCKDGNMNK 258
           L RA++   A  +   + + GV            +P    +   F  LI  + ++G +  
Sbjct: 57  LVRARLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFDLLIRVYLREGMVGD 116

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           AL  F +M  +   P + T N L+    K  ++      + +M++R++ P+  ++ ILIN
Sbjct: 117 ALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILIN 176

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
             C  G + +A  L  +M   G  P++V+ NT++  YC+ G    A E + +M S+G++ 
Sbjct: 177 VLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEA 236

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D+ +YN L++   +     K + L+ KM  + + P+ ITYN I+ GF ++G++  +  I 
Sbjct: 237 DACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIF 296

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             M    L P+  TY  LI+GH    N ++A    + M   G  P++ 
Sbjct: 297 QEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEV 344



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 99/187 (52%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ L +   +  + + L EM ++G  PD   Y  L+N  CR G +  AF+L + M   G
Sbjct: 841  IISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALG 900

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  G    ++L+ GL K G+ + AK VLD ML+  L P  AT+ TL+   CR E++ EA 
Sbjct: 901  ISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEAL 960

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++   M    V  D+++++ LI     +G +  AL  ++E+K  GL P+   Y I+I+  
Sbjct: 961  KLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAI 1020

Query: 181  CRNGFVL 187
              N   L
Sbjct: 1021 FTNDISL 1027



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 113/217 (52%), Gaps = 1/217 (0%)

Query: 26   VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
            ++PD  T++++I+   R   ++E+  L++ M  +G  P    Y +L+N +C+ G    A 
Sbjct: 831  IFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAF 890

Query: 86   EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            ++ DEM  +G+S      + L+    +   + EA+ +   M R+ + P I +F+TL+ +F
Sbjct: 891  KLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMF 950

Query: 146  SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
             RN  L  AL     M    +  D + Y ++I+G C +G V  ALK+  E+ ++G   ++
Sbjct: 951  CRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNM 1010

Query: 206  VTYNTILNGLCRAKM-LTEADDLFNEMLERGVFPDFY 241
             TY  +++ +    + L + + L  ++ ERGV    +
Sbjct: 1011 TTYCILIDAIFTNDISLAKGEVLLKDLQERGVISGHW 1047


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 257/489 (52%), Gaps = 5/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++    ++  +      L E++++ +     TY T +   C  G L+ A+ ++  M   G
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASG 450

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  Y +LI    +K R   A  VL EM + G++PDT  YN+L++   + + M EA 
Sbjct: 451 CRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEAR 510

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM   G  PD  ++   I  +   G+   A  Y +EM   G++P+ VL T +IN Y
Sbjct: 511 SFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEY 570

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V+EA      M+E+G + D  TY  ++NGL +   + +A+++F+EM  +G+ PD 
Sbjct: 571 CKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDV 630

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++ TLI G  K GNM KA ++FD M Q  +  +++ YN L+ GFC+ GE+EKA +L  +
Sbjct: 631 FSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDE 690

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +   PN ++Y  +I+GYC  G + EAF+L+ EM  KG+ P      T++ G CR  D
Sbjct: 691 MSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND 750

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL----VPDVI 416
             +A     +   +G    S  +N LIN   +    +    +++++ +        P+ +
Sbjct: 751 VERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDV 809

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN+++   C++G +  ++ +   M +  L P   TYT+L+NG+       E F   DE+
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEV 869

Query: 477 LQRGFVPDD 485
           +  G  PD+
Sbjct: 870 IAAGIEPDN 878



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 155/482 (32%), Positives = 257/482 (53%), Gaps = 18/482 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K  K+D A+ FL EM + G  PD  TY   I+ Y   G    A + +  M   G
Sbjct: 496 LIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECG 555

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P       LIN  CKKG+   A      M++ G+  D  TY  L+    +   +++AE
Sbjct: 556 VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAE 615

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF EM  +G+APD+ S+ TLI  FS+ G + +A   F EM  AGL  + ++Y +++ G+
Sbjct: 616 EIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGF 675

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G + +A ++ DEM  KG   + VTY TI++G C++  L EA  LF+EM  +G+ PD 
Sbjct: 676 CRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDS 735

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +TTL+ G C+  ++ +A+ +F+   +K        +N LI+   K G+ E    L  D
Sbjct: 736 FVYTTLVDGCCRLNDVERAITIFET-NEKGCASSSAPFNALINWVFKFGKTE----LTTD 790

Query: 301 MISRKI--------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           MI+R +         PN ++Y I+I+  C  G++  A  L++ M    + PT+++  +++
Sbjct: 791 MINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLL 850

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            GY + G  S+      ++++ G++PD+I Y+ +IN F++E    KA  L+ +M  +  V
Sbjct: 851 NGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAV 910

Query: 413 PD-----VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            D     + T   +L+GF + G M  +E ++  M+     PD ST   LIN     +N +
Sbjct: 911 DDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQR 970

Query: 468 EA 469
            A
Sbjct: 971 MA 972



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 165/540 (30%), Positives = 257/540 (47%), Gaps = 56/540 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLE------------- 47
           +++AL K +++D        M ++ V  D  +Y  LI A+CR+G ++             
Sbjct: 195 LLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEEL 254

Query: 48  --------EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD 99
                   EA +L  SMS KGL P   +YN LI+GLCK+ R + AK +L EM  +GL  D
Sbjct: 255 GTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFAD 314

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
              Y+ L+    +  N   A  +  EM   G + D + +   I + S+ G +++A   F 
Sbjct: 315 NVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFD 374

Query: 160 EMKSAGLVPDNVLYTIIINGY-----------------------------------CRNG 184
            M + G+ P    Y  +I G+                                   C +G
Sbjct: 375 GMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSG 434

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            +  A  +  EM   GC  +VV Y T++    +     +A  +  EM E+G+ PD + + 
Sbjct: 435 DLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYN 494

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           +LI G  K   M++A +    M +   KPD  TY   I G+ + GE   A+K   +M+  
Sbjct: 495 SLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC 554

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN +    LIN YC  G V EA   +  MV +GI     +   ++ G  ++G  + A
Sbjct: 555 GVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDA 614

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           +E   +M  +G+ PD  SY TLI+GF +  NM KA ++  +M   GL  +VI YN++L G
Sbjct: 615 EEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGG 674

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           FCR G +  ++ +L  M  KG  P+  TY T+I+G+    +L EAF+  DEM  +G VPD
Sbjct: 675 FCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPD 734



 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 247/469 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +++ AK  L EM   G++ D V Y+ LI+   +    + A  L++ M   G
Sbjct: 286 LIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHG 345

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                  Y+  I  + K+G  ++AK + D M+  G++P    Y +L+    R++N+ +  
Sbjct: 346 FSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGY 405

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  E+ +R +     ++ T +     +G LD A    +EM ++G  P+ V+YT +I  +
Sbjct: 406 ELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTF 465

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +     +A+++  EM E+G   D   YN+++ GL +AK + EA     EM+E G  PD 
Sbjct: 466 LQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDA 525

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+   I G+ + G    A      M +  + P+ V    LI+ +CK G++ +A   +  
Sbjct: 526 FTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRS 585

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + I  +  +Y +L+NG    G V +A  +++EM GKGI P + S  T+I G+ + G+
Sbjct: 586 MVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGN 645

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA     +MV  G+  + I YN L+ GF R   ++KA  L+ +M  +G  P+ +TY  
Sbjct: 646 MQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCT 705

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           I+ G+C+ G + ++  +   M  KGL PD   YTTL++G    N+++ A
Sbjct: 706 IIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 754



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-----GLKPGVFTYNSLING 74
           E+   G+ PD + Y+ +INA+ +EG   +A  L++ M  K     G K  + T  +L++G
Sbjct: 868 EVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSG 927

Query: 75  LCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
             K G  + A++V++ M+++   PD++T   L+ ESC   N   A +
Sbjct: 928 FAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 105/253 (41%), Gaps = 39/253 (15%)

Query: 257 NKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK--ISPNYIS- 312
           +K L+ F+++ +QK  +  + +++ L    C  G +EKA+ +   MI RK  ++  + S 
Sbjct: 78  SKLLSFFNLVDSQKVTEQKLDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSI 137

Query: 313 -----------------YGILINGYCSMGHVTEAFRLWYEM--VGKGIKPTLVSCNTIIK 353
                            +GILI+GY   G + EA  ++     +   + P+L  CN ++ 
Sbjct: 138 VRCLREFVGKSDDRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLD 197

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
              +        +    MV   V  D  SY  LI    R+ N+  A  ++ K E +    
Sbjct: 198 ALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEE---L 254

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
              T NV            D  L L + +  KGL P R +Y  LI+G   Q  L++A   
Sbjct: 255 GTATLNV------------DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSL 302

Query: 473 HDEMLQRGFVPDD 485
             EM   G   D+
Sbjct: 303 LVEMNSVGLFADN 315


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  291 bits (744), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 160/488 (32%), Positives = 268/488 (54%), Gaps = 1/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  K D  K F  +M   G  P   TYN +I+  C+EG +E A  L   M  +G
Sbjct: 101 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 160

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TYNS+I+G  K GR D      +EM  M   PD  TYN L+   C+   +    
Sbjct: 161 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 220

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E + EM   G+ P++VS+STL+  F + G + +A+ ++ +M+  GLVP+   YT +I+  
Sbjct: 221 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 280

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A ++ +EML+ G   +VVTY  +++GLC A+ + EA++LF +M   GV P+ 
Sbjct: 281 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 340

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LIHG  K  NM++AL L + +  + IKPD++ Y T I G C + ++E A  +  +
Sbjct: 341 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 400

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I  N + Y  L++ Y   G+ TE   L  EM    I+ T+V+   +I G C++  
Sbjct: 401 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 460

Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            SKA ++ +++ ++ G+  ++  +  +I+G  ++  ++ A  L  +M  +GLVPD   Y 
Sbjct: 461 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 520

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G  +QG + ++  +  +M E G+  D   YT+L+ G    N L++A  F +EM+  
Sbjct: 521 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 580

Query: 480 GFVPDDAF 487
           G  PD+  
Sbjct: 581 GIHPDEVL 588



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 248/493 (50%), Gaps = 36/493 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++ L +     G LEEA Q  + M    + P   + N L++   K G+ D  K  
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M+  G  P   TYN ++   C++ ++  A  +F EM  RG+ PD V+++++I  F +
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+LD  + +F EMK     PD + Y  +IN +C+ G +   L+   EM   G   +VV+
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T+++  C+  M+ +A   + +M   G+ P+ YT+T+LI  +CK GN++ A  L + M 
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q  ++ ++VTY  LIDG C    M++A +L+  M +  + PN  SY  LI+G+    ++ 
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  L  E+ G+GIKP L+   T I G C       A   +++M   G+  +S+ Y TL+
Sbjct: 358 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 417

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ------------------- 428
           + + +  N  +   L+ +M+   +   V+T+ V++ G C+                    
Sbjct: 418 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 477

Query: 429 ------------GRMHDSEL-----ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
                       G   D+++     +  +M++KGL PDR+ YT+L++G+  Q N+ EA  
Sbjct: 478 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 537

Query: 472 FHDEMLQRGFVPD 484
             D+M + G   D
Sbjct: 538 LRDKMAEIGMKLD 550



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 221/416 (53%), Gaps = 2/416 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  K+     F  EM+  G+ P+ V+Y+TL++A+C+EG +++A +    M   G
Sbjct: 206 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 265

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +TY SLI+  CK G    A  + +EMLQ+G+  +  TY  L+   C  E M EAE
Sbjct: 266 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 325

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F +M   GV P++ S++ LI  F +   +DRAL    E+K  G+ PD +LY   I G 
Sbjct: 326 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 385

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    +  A  + +EM E G   + + Y T+++   ++   TE   L +EM E  +    
Sbjct: 386 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 445

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQK-SIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            TF  LI G CK+  ++KA++ F+ ++    ++ +   +  +IDG CK  ++E A  L+ 
Sbjct: 446 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 505

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + + P+  +Y  L++G    G+V EA  L  +M   G+K  L++  +++ G     
Sbjct: 506 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN 565

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK-MENQGLVPD 414
              KA  FL +M+ EG+ PD +   +++        +D+A  L S  M++Q L  D
Sbjct: 566 QLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSD 621



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 189/385 (49%), Gaps = 35/385 (9%)

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           +R    P    F  L  +    G L+ A+  F +MK   + P       +++ + + G  
Sbjct: 52  TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 111

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +  +   +M+  G    V TYN +++ +C+   +  A  LF EM  RG+ PD  T+ ++
Sbjct: 112 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 171

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN--------------------------- 279
           I G  K G ++  +  F+ M     +PD++TYN                           
Sbjct: 172 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 231

Query: 280 --------TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
                   TL+D FCK G M++A K + DM    + PN  +Y  LI+  C +G++++AFR
Sbjct: 232 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 291

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L  EM+  G++  +V+   +I G C +    +A+E   KM + GV P+  SYN LI+GFV
Sbjct: 292 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 351

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           + +NMD+A  L+++++ +G+ PD++ Y   + G C   ++  +++++  M E G+  +  
Sbjct: 352 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 411

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEM 476
            YTTL++ +    N  E     DEM
Sbjct: 412 IYTTLMDAYFKSGNPTEGLHLLDEM 436



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 35/319 (10%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV     ++ + + L    ML EA   F++M    VFP   +   L+H   K G  +   
Sbjct: 56  CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 115

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI-------------- 306
             F  M     +P + TYN +ID  CK G++E A  L+ +M  R +              
Sbjct: 116 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 175

Query: 307 ---------------------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
                                 P+ I+Y  LIN +C  G +      + EM G G+KP +
Sbjct: 176 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 235

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           VS +T++  +C+ G   +A +F   M   G+ P+  +Y +LI+   +  N+  AF L ++
Sbjct: 236 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 295

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M   G+  +V+TY  ++ G C   RM ++E +  +M   G+ P+ ++Y  LI+G V   N
Sbjct: 296 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 355

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +  A    +E+  RG  PD
Sbjct: 356 MDRALELLNELKGRGIKPD 374



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 120/227 (52%), Gaps = 2/227 (0%)

Query: 261 NLFDIM--TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           ++FD++  T+    P    ++ L      +G +E+A + ++ M   ++ P   S   L++
Sbjct: 44  DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 103

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            +  +G   +  R + +M+G G +PT+ + N +I   C+ GD   A     +M   G+ P
Sbjct: 104 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 163

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D+++YN++I+GF +   +D       +M++    PDVITYN ++  FC+ G++       
Sbjct: 164 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY 223

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M   GL P+  +Y+TL++    +  +++A +F+ +M + G VP++
Sbjct: 224 REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 270



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 83/225 (36%), Gaps = 57/225 (25%)

Query: 317 INGYCSMGHVTEAFRLWY-------EMV---------------------GKGIKPTLVS- 347
           +  YC + H+    R++Y       EMV                     G G+   L S 
Sbjct: 10  VESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSV 69

Query: 348 ----------------------------CNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
                                       CN ++  + + G       F   M+  G  P 
Sbjct: 70  LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 129

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN +I+   +E +++ A  L  +M+ +GLVPD +TYN ++ GF + GR+ D+     
Sbjct: 130 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 189

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M +    PD  TY  LIN       L     F+ EM   G  P+
Sbjct: 190 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  291 bits (744), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 160/488 (32%), Positives = 268/488 (54%), Gaps = 1/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  K D  K F  +M   G  P   TYN +I+  C+EG +E A  L   M  +G
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TYNS+I+G  K GR D      +EM  M   PD  TYN L+   C+   +    
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E + EM   G+ P++VS+STL+  F + G + +A+ ++ +M+  GLVP+   YT +I+  
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A ++ +EML+ G   +VVTY  +++GLC A+ + EA++LF +M   GV P+ 
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LIHG  K  NM++AL L + +  + IKPD++ Y T I G C + ++E A  +  +
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I  N + Y  L++ Y   G+ TE   L  EM    I+ T+V+   +I G C++  
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592

Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            SKA ++ +++ ++ G+  ++  +  +I+G  ++  ++ A  L  +M  +GLVPD   Y 
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G  +QG + ++  +  +M E G+  D   YT+L+ G    N L++A  F +EM+  
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712

Query: 480 GFVPDDAF 487
           G  PD+  
Sbjct: 713 GIHPDEVL 720



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 248/493 (50%), Gaps = 36/493 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++ L +     G LEEA Q  + M    + P   + N L++   K G+ D  K  
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M+  G  P   TYN ++   C++ ++  A  +F EM  RG+ PD V+++++I  F +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+LD  + +F EMK     PD + Y  +IN +C+ G +   L+   EM   G   +VV+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T+++  C+  M+ +A   + +M   G+ P+ YT+T+LI  +CK GN++ A  L + M 
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q  ++ ++VTY  LIDG C    M++A +L+  M +  + PN  SY  LI+G+    ++ 
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  L  E+ G+GIKP L+   T I G C       A   +++M   G+  +S+ Y TL+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ------------------- 428
           + + +  N  +   L+ +M+   +   V+T+ V++ G C+                    
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609

Query: 429 ------------GRMHDSEL-----ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
                       G   D+++     +  +M++KGL PDR+ YT+L++G+  Q N+ EA  
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669

Query: 472 FHDEMLQRGFVPD 484
             D+M + G   D
Sbjct: 670 LRDKMAEIGMKLD 682



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 220/416 (52%), Gaps = 2/416 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  K+     F  EM+  G+ P+ V+Y+TL++A+C+EG +++A +    M   G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +TY SLI+  CK G    A  + +EMLQ+G+  +  TY  L+   C  E M EAE
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F +M   GV P++ S++ LI  F +   +DRAL    E+K  G+ PD +LY   I G 
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    +  A  + +EM E G   + + Y T+++   ++   TE   L +EM E  +    
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 577

Query: 241 YTFTTLIHGHCKDGNMNKALNLFD-IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            TF  LI G CK+  ++KA++ F+ I     ++ +   +  +IDG CK  ++E A  L+ 
Sbjct: 578 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + + P+  +Y  L++G    G+V EA  L  +M   G+K  L++  +++ G     
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN 697

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK-MENQGLVPD 414
              KA  FL +M+ EG+ PD +   +++        +D+A  L S  M++Q L  D
Sbjct: 698 QLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSD 753



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 189/385 (49%), Gaps = 35/385 (9%)

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           +R    P    F  L  +    G L+ A+  F +MK   + P       +++ + + G  
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +  +   +M+  G    V TYN +++ +C+   +  A  LF EM  RG+ PD  T+ ++
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN--------------------------- 279
           I G  K G ++  +  F+ M     +PD++TYN                           
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363

Query: 280 --------TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
                   TL+D FCK G M++A K + DM    + PN  +Y  LI+  C +G++++AFR
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L  EM+  G++  +V+   +I G C +    +A+E   KM + GV P+  SYN LI+GFV
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           + +NMD+A  L+++++ +G+ PD++ Y   + G C   ++  +++++  M E G+  +  
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEM 476
            YTTL++ +    N  E     DEM
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEM 568



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 35/319 (10%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV     ++ + + L    ML EA   F++M    VFP   +   L+H   K G  +   
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI-------------- 306
             F  M     +P + TYN +ID  CK G++E A  L+ +M  R +              
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307

Query: 307 ---------------------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
                                 P+ I+Y  LIN +C  G +      + EM G G+KP +
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           VS +T++  +C+ G   +A +F   M   G+ P+  +Y +LI+   +  N+  AF L ++
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M   G+  +V+TY  ++ G C   RM ++E +  +M   G+ P+ ++Y  LI+G V   N
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +  A    +E+  RG  PD
Sbjct: 488 MDRALELLNELKGRGIKPD 506



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 120/227 (52%), Gaps = 2/227 (0%)

Query: 261 NLFDIM--TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           ++FD++  T+    P    ++ L      +G +E+A + ++ M   ++ P   S   L++
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            +  +G   +  R + +M+G G +PT+ + N +I   C+ GD   A     +M   G+ P
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D+++YN++I+GF +   +D       +M++    PDVITYN ++  FC+ G++       
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY 355

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M   GL P+  +Y+TL++    +  +++A +F+ +M + G VP++
Sbjct: 356 REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 83/225 (36%), Gaps = 57/225 (25%)

Query: 317 INGYCSMGHVTEAFRLWY-------EMV---------------------GKGIKPTLVS- 347
           +  YC + H+    R++Y       EMV                     G G+   L S 
Sbjct: 142 VESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSV 201

Query: 348 ----------------------------CNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
                                       CN ++  + + G       F   M+  G  P 
Sbjct: 202 LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 261

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN +I+   +E +++ A  L  +M+ +GLVPD +TYN ++ GF + GR+ D+     
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M +    PD  TY  LIN       L     F+ EM   G  P+
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  291 bits (744), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 257/514 (50%), Gaps = 32/514 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A   L +M Q+G  P  VTY  L+ A C+     EA  +++ M  KG
Sbjct: 147 IIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG 206

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +ING+C++GR D AKE+L+ +   G  PD  +Y T+L   C      + +
Sbjct: 207 CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVK 266

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +   P+ V+F  L+  F R G ++RA+   ++M   G  P+  L  I+IN  
Sbjct: 267 VLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 326

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A    + M   GC  D ++Y T+L GLCRA     A +L  EM+ +   P+ 
Sbjct: 327 CKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNE 386

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG----------- 289
            TF T I   C+ G + +A+ L ++M +      IVTYN L+ GFC  G           
Sbjct: 387 VTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN 446

Query: 290 ---------------------EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                                 ++ A +L A MI +    N +++ +L++ +C  G V E
Sbjct: 447 LPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEE 506

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  +M+  G  P L++ NT++ G  +  ++ +A E L  +VS+GV  D+I+Y+++++
Sbjct: 507 AMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVD 566

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              RE+  ++A  ++  +++ G+ P V  YN IL   C++     +      M+  G  P
Sbjct: 567 VLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMP 626

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           + STY  LI G   +  LKEA     E+  +G +
Sbjct: 627 NESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 660



 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 242/484 (50%), Gaps = 6/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  +   A   L   E  G   D   YNTL+  YCR G L+ A +L+ SM    
Sbjct: 80  LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP--- 136

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TY  +I GLC +GR   A  +LD+MLQ G  P   TY  LL   C+     EA 
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G  P+IV+++ +I    R G++D A      + S G  PD V YT ++ G 
Sbjct: 197 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 256

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +   +  EM++K CV + VT++ ++   CR  M+  A  +  +M + G  P+ 
Sbjct: 257 CAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNT 316

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                +I+  CK G ++ A +  + M      PD ++Y T++ G C+ G  E A +L  +
Sbjct: 317 TLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPE 376

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   PN +++   I   C  G + +A +L   M   G    +V+ N ++ G+C  G 
Sbjct: 377 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR 436

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E  + +  E   P++I+Y TL+ G    E +D A  L++ M  +    + +T+NV
Sbjct: 437 VDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNV 493

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++ FC++G + ++  ++ +M+E G  P+  T+ TL++G     N +EA      ++ +G
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553

Query: 481 FVPD 484
              D
Sbjct: 554 VSLD 557



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/434 (31%), Positives = 215/434 (49%), Gaps = 6/434 (1%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L EA +L+ + S +G  P V+    LI  LC++GR   A  VL      G   D   YNT
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   CR   +  A  +   M    V PD  +++ +I      G++  AL    +M   G
Sbjct: 115 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P  V YT+++   C++    EA+ + DEM  KGC  ++VTYN I+NG+CR   + +A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           ++ N +   G  PD  ++TT++ G C     +    LF  M  K   P+ VT++ L+  F
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C+ G +E+A ++   M     +PN     I+IN  C  G V +A+     M   G  P  
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDT 351

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           +S  T+++G CR+G    A E L +MV +   P+ +++NT I    ++  +++A  L+  
Sbjct: 352 ISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIEL 411

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M   G    ++TYN ++ GFC QGR+ DS L L+  +     P+  TYTTL+ G      
Sbjct: 412 MPEYGCSVGIVTYNALVHGFCVQGRV-DSALELFNNLP--CEPNTITYTTLLTGLCHAER 468

Query: 466 LKEAFRFHDEMLQR 479
           L  A      M+Q+
Sbjct: 469 LDAAAELLAGMIQK 482



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 161/323 (49%), Gaps = 3/323 (0%)

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
           S G  PD  L T +I   CR G   +A ++       G  +DV  YNT++ G CR   L 
Sbjct: 67  SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLD 126

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
            A  L   M    V PD YT+T +I G C  G +  AL L D M Q+  +P +VTY  L+
Sbjct: 127 AARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLL 183

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +  CK     +A  +  +M ++  +PN ++Y ++ING C  G V +A  +   +   G +
Sbjct: 184 EAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQ 243

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P +VS  T++KG C +          ++MV +   P+ ++++ L+  F R   +++A  +
Sbjct: 244 PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQV 303

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           + +M   G  P+    N+++   C+QGR+ D+   L  M   G NPD  +YTT++ G   
Sbjct: 304 LQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCR 363

Query: 463 QNNLKEAFRFHDEMLQRGFVPDD 485
               + A     EM+++   P++
Sbjct: 364 AGRWEHAKELLPEMVRKNCPPNE 386



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 89/172 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C+   ++ A   + +M + G  P+ +T+NTL++   ++   EEA +L++ +  KG
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY+S+++ L ++ R + A ++L  +  MG+ P    YN +L   C++    +A 
Sbjct: 554 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 613

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           + F  M   G  P+  ++  LI   +  G L  A     E+ + G++  ++L
Sbjct: 614 DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSLL 665


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  290 bits (743), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 162/486 (33%), Positives = 268/486 (55%), Gaps = 5/486 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC  +++DSA   L +M + G  P+++ Y TLI+A  ++  + EA +L+  M   G
Sbjct: 224 VMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG 283

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+N +I+GLCK  +   A +++D ML  G  PD  TY  LL   CR   ++EA 
Sbjct: 284 CMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEAR 343

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-MKSAGLVPDNVLYTIIING 179
           +I  ++      P+    +TLI  +  +GQL  A  +  E M + G  PD   Y I+++G
Sbjct: 344 KILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHG 399

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G +  A  + +EM  +GC  +V+TY  ++NGLC+A +L EA  + +EM  RG+  +
Sbjct: 400 LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTIN 459

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  LI   C+   ++ ALNL   M  K  KPD+ TYN+LI G CKV  +++A +L+ 
Sbjct: 460 SVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFH 519

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+      N ++Y  LI+     G   +A  L  +M+ +G     ++ N +IK +C+ G
Sbjct: 520 NMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVG 579

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  K  E   +M+ +G+  D+IS N +ING  +   +D AF  +    N+G VPD++TYN
Sbjct: 580 NIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYN 639

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L G C+ GR+ ++  +  R+  +G+ PD  TY T I+    +  + +A  F    ++ 
Sbjct: 640 SVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIEN 699

Query: 480 GFVPDD 485
           GFVP +
Sbjct: 700 GFVPSN 705



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/439 (33%), Positives = 236/439 (53%), Gaps = 5/439 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK +KI  A   +  M  +G YPD +TY  L++  CR G L EA +++  +    
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC-- 351

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDE-MLQMGLSPDTATYNTLLVESCRKENMSEA 119
             P     N+LING    G+   A+  L+E M+  G  PD  TYN L+   C++ ++S A
Sbjct: 352 --PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  EMSRRG  P++++++ L+    + G L+ A +   EM + GL  ++V+Y  +I  
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICA 469

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR   V  AL +  EM  KGC  D+ TYN+++ GLC+   + EA  LF+ ML  G   +
Sbjct: 470 LCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLIH   + G   KAL L + M  +    D +TYN LI  FCKVG +EK  +L+ 
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            MI   +  + IS  I+ING C +G V  AF    + + +G  P +V+ N+++ G C+ G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A     ++  EGV PD+ +YNT I+   +E  ++ A     +    G VP  +T+N
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWN 709

Query: 420 VILTGFCRQGRMHDSELIL 438
           V++    +Q    ++  +L
Sbjct: 710 VLVYTLLKQSNQENNFFVL 728



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 231/495 (46%), Gaps = 33/495 (6%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           QKG       Y   IN     G  +   +L+  M  +G+      +  ++    K G+  
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTL 141
           +A  +L +M  + L   T     L++E     N  + A  +F +M  +GV+P + +F  +
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           +       ++D A    R+M   G VP++++Y  +I+   +   V EALK+ +EM   GC
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGC 284

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + DV T+N +++GLC+   + +A  L + ML RG +PD  T+  L+HG C+ G +N+A  
Sbjct: 285 MPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344

Query: 262 LF--------------------------------DIMTQKSIKPDIVTYNTLIDGFCKVG 289
           +                                 + M     +PDI TYN L+ G CK G
Sbjct: 345 ILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +  A  L  +M  R   PN I+Y IL+NG C  G + EA  + +EM  +G+    V  N
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I   CR      A   LS+M ++G  PD  +YN+LI G  + + +D+AF L   M   
Sbjct: 465 CLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLD 524

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G V + +TYN ++    R+G    +  ++  M+ +G   D+ TY  LI       N+++ 
Sbjct: 525 GAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKG 584

Query: 470 FRFHDEMLQRGFVPD 484
              +++M+  G   D
Sbjct: 585 LELYEQMIMDGLGAD 599



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 1/210 (0%)

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            Y   I+    +G+ +  +KL   M    I      + I++  Y   G   +A RL  +M
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 337 VGKGI-KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
               + +PT  S + +++          A      M+S+GV P   ++  ++        
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +D A +L+  M   G VP+ I Y  ++    ++ ++ ++  +L  M   G  PD  T+  
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +I+G    N + +A +  D ML RGF PD+
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDN 323


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  290 bits (743), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 149/479 (31%), Positives = 264/479 (55%), Gaps = 6/479 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C    + +A   L EM+  G  PD  T+  +I A    G L+ A   + SM   G
Sbjct: 118 VISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---G 174

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY +LI    +  + + A ++L+EM + G  P+  TYN L+   C+   +  A+
Sbjct: 175 CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQ 234

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M   G AP++++F++L+  F + G +D A      M + G+ P+ V Y+ +I+G 
Sbjct: 235 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 294

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++   LEA ++ +EM  +G   D  TY+ +++GLC+A  + EA+ +   M   G  PD 
Sbjct: 295 CKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 354

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++++IH  CK G + +A      M ++   PD+VTYNT+IDG CK+G++ +A  +   
Sbjct: 355 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQ 414

Query: 301 MI-SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           M  S  + P+ ++Y  +ING C    + EA +L   M   G  P +V+  TII G C+ G
Sbjct: 415 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 474

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+  L  M   G  P+ ++Y TLI+G  +   +D+A  ++ +M N G  P+++TYN
Sbjct: 475 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 534

Query: 420 VILTGFCRQGRMHDSELILWRMIE--KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            ++ G C  GR+ +++ ++ RM +     +PD +TY T++N  +S + ++EA +  ++M
Sbjct: 535 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  287 bits (734), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 146/411 (35%), Positives = 235/411 (57%), Gaps = 3/411 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  +  K++ A   L EM ++G  P+ VTYN L++A C+   +  A  ++  M   G
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+NSL++G CK+G  D A+++L  M+  G+ P+  TY+ L+   C+ +   EA+
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  RGV PD  ++S LI    +  +++ A    R M  +G  PD V+Y+ II+ +
Sbjct: 305 EVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 364

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-VFPD 239
           C++G +LEA K   EM ++    DVVTYNT+++GLC+   + EA  +  +M E G V PD
Sbjct: 365 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPD 424

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++T+I+G CK   + +A  L D M +    PD+VTY T+IDG CK G +E+A  L  
Sbjct: 425 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 484

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M     +PN ++Y  LI+G C    V EA R+  EM   G  P LV+ NT++ G C SG
Sbjct: 485 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 544

Query: 360 DASKADEFLSKMVSEGVD--PDSISYNTLINGFVREENMDKAFALVSKMEN 408
              +A + + +M     +  PD+ +Y T++N  +  + + +A  L+ +M++
Sbjct: 545 RIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 147/446 (32%), Positives = 246/446 (55%), Gaps = 8/446 (1%)

Query: 42  REGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL--CKKGRCDRAKEVLDEMLQMGLSPD 99
           ++  L  AF      S  G     F++NSL+  L  CKK R   A ++    L     PD
Sbjct: 54  KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHR--EAGDLFRSELLASCEPD 111

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
             +YN ++   C   ++  A E+  EM   G APD  + + +I   +  G LD A+ + R
Sbjct: 112 VCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLR 171

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
            M   G  P+ V YT +I  + R   + EA+K+ +EM E+GC  ++VTYN +++ LC+  
Sbjct: 172 SM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLS 228

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
           M+  A D+  +M+E G  P+  TF +L+ G CK GN++ A  L  IM  K ++P++VTY+
Sbjct: 229 MVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYS 288

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
            LIDG CK  +  +A ++  +M +R ++P+  +Y  LI+G C    + EA ++   M G 
Sbjct: 289 ALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 348

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           G  P +V  ++II  +C+SG   +A + L +M  +   PD ++YNT+I+G  +   + +A
Sbjct: 349 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 408

Query: 400 FALVSKMENQG-LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
             ++ +M+  G ++PDV+TY+ ++ G C+   + +++ +L RM + G NPD  TYTT+I+
Sbjct: 409 QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 468

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G      L+EA      M + G  P+
Sbjct: 469 GLCKCGRLEEAEYLLQGMKRAGCAPN 494


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 259/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +D A+ FL +M  K V P+  TYN LI  Y   G  +EA ++   M    
Sbjct: 263 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 322

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T + L+  LCK G+   A++V D M   G +PD  +YN +L     K  + +  
Sbjct: 323 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 382

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   G+APD  +F+ LI  ++  G LD+A++ F EM+  G+ PD V Y  +I   
Sbjct: 383 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 442

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A++  ++M+++G   D   YN ++ G C    L +A +L +E++  G+  D 
Sbjct: 443 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 502

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F+++I+  CK G +  A N+FD+     + PD V YN L+DG+C VG+MEKA +++  
Sbjct: 503 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 562

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I PN + YG L+NGYC +G + E   L+ EM+ +GIKP+ +  + II G   +G 
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M   G+  D  +YN ++ G  +    D+A  L  ++    +  ++IT N 
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  +  R+ +++ +   +    L P   TY+ +I   + +  ++EA      M   G
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742

Query: 481 FVPD 484
             P+
Sbjct: 743 CEPN 746



 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 264/488 (54%), Gaps = 5/488 (1%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++   C+  + D A  + L    + G  PD  +Y+ L+ + C +G   +A  L+  M+  
Sbjct: 155 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 214

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V  YN++I+G  K+G  ++A ++  EM+Q G+ PD  TYN+++   C+   M 
Sbjct: 215 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 274

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +AE    +M  + V P+  +++ LI  +S  GQ   A+  F+EM+   ++PD V  ++++
Sbjct: 275 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 334

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
              C+ G + EA  + D M  KG   DV +YN +LNG      L +  DLF+ ML  G+ 
Sbjct: 335 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 394

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PDFYTF  LI  +   G ++KA+ +F+ M    +KPD+VTY T+I   C++G+M+ A + 
Sbjct: 395 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 454

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  MI + ++P+  +Y  LI G+C+ G + +A  L  E++  G+   +V  ++II   C+
Sbjct: 455 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 514

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G    A       V+ G+ PD++ YN L++G+     M+KA  +   M + G+ P+V+ 
Sbjct: 515 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 574

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA-FRFHDEM 476
           Y  ++ G+C+ GR+ +   +   M+++G+ P    Y+ +I+G         A  +FH EM
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFH-EM 633

Query: 477 LQRGFVPD 484
            + G   D
Sbjct: 634 TESGIAMD 641



 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 243/478 (50%), Gaps = 2/478 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY--PDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++ +LC   K   A   L  M + G    P+ V YNT+I+ + +EG + +A  L   M  
Sbjct: 191 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 250

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G+ P + TYNS+++ LCK    D+A+  L +M+   + P+  TYN L+          E
Sbjct: 251 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 310

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F EM R  + PD+V+ S L+G   + G++  A   F  M   G  PD   Y I++N
Sbjct: 311 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 370

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G +++   + D ML  G   D  T+N ++       ML +A  +FNEM + GV P
Sbjct: 371 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 430

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+ T+I   C+ G M+ A+  F+ M  + + PD   YN LI GFC  G + KA +L 
Sbjct: 431 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 490

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           +++++  +  + + +  +IN  C +G V +A  ++   V  G+ P  V  N ++ GYC  
Sbjct: 491 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLV 550

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA      MVS G++P+ + Y TL+NG+ +   +D+  +L  +M  +G+ P  I Y
Sbjct: 551 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 610

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           ++I+ G    GR   +++    M E G+  D  TY  ++ G        EA     E+
Sbjct: 611 SIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 668



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 239/460 (51%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P + TY  L++   R    E A      +   GL+  +   N L+ G C+  R D A ++
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 88  -LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV--APDIVSFSTLIGI 144
            L    ++G  PD  +Y+ LL   C +    +A+++   M+  G   +P++V+++T+I  
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G +++A   F+EM   G+ PD V Y  +++  C+   + +A     +M+ K  + +
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             TYN ++ G        EA  +F EM    + PD  T + L+   CK G + +A ++FD
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K   PD+ +YN +++G+   G +     L+  M+   I+P++ ++ +LI  Y + G
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A  ++ EM   G+KP +V+  T+I   CR G    A E  ++M+ +GV PD  +YN
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI GF    ++ KA  L+S++ N G+  D++ ++ I+   C+ GR+ D++ I    +  
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 531

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL+PD   Y  L++G+     +++A R  D M+  G  P+
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 571



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 241/472 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LCK  KI  A+     M  KG  PD  +YN ++N Y  +G L +   L + M G G
Sbjct: 333 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 392

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T+N LI      G  D+A  + +EM   G+ PD  TY T++   CR   M +A 
Sbjct: 393 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 452

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E F +M  +GVAPD  +++ LI  F  +G L +A     E+ + G+  D V ++ IIN  
Sbjct: 453 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 512

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V++A  + D  +  G   D V YN +++G C    + +A  +F+ M+  G+ P+ 
Sbjct: 513 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 572

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TL++G+CK G +++ L+LF  M Q+ IKP  + Y+ +IDG  + G    A   + +
Sbjct: 573 VGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHE 632

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I+ +  +Y I++ G        EA  L+ E+    +K  +++ NT+I G  ++  
Sbjct: 633 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 692

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +  + +    + P  ++Y+ +I   ++E  +++A  + S M+N G  P+    N 
Sbjct: 693 VEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 752

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           ++    ++  +  +   L ++ E+  + +  T   L++   S+   +E  RF
Sbjct: 753 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRF 804



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 224/467 (47%), Gaps = 19/467 (4%)

Query: 39  AYCREGFL--EEAFQLMNSMSGKGLKPGVFTYNSLINGLCK---KGRCDRAKEVLDEMLQ 93
           A  REG L  EEA  L++ +  +G        N  +  L +      C     +   +  
Sbjct: 39  ARVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFN 98

Query: 94  MG---------LSPDTATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTLIG 143
                      LSP + TY  +L++ C + +  E A   F ++ R G+  +I+  + L+ 
Sbjct: 99  RAASRAQGPRVLSPTSHTY-AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLE 157

Query: 144 IFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG-- 200
            F    + D AL +        G VPD   Y+I++   C  G   +A  +   M E G  
Sbjct: 158 GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV 217

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  +VV YNT+++G  +   + +A DLF EM++RG+ PD  T+ +++H  CK   M+KA 
Sbjct: 218 CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 277

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
                M  K + P+  TYN LI G+   G+ ++A +++ +M    I P+ ++  +L+   
Sbjct: 278 AFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 337

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + EA  ++  M  KG  P + S N ++ GY   G      +    M+ +G+ PD 
Sbjct: 338 CKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDF 397

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            ++N LI  +     +DKA  + ++M + G+ PDV+TY  ++   CR G+M D+     +
Sbjct: 398 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 457

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           MI++G+ PD+  Y  LI G  +  +L +A     E++  G   D  F
Sbjct: 458 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 504


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 146/457 (31%), Positives = 248/457 (54%), Gaps = 3/457 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK  K   A   +  +E  G  PD +TYN LI+ YC+ G +  A QL++ MS   
Sbjct: 151 LIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS--- 207

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+++  LC  G+   A EVLD  +Q    PD  TY  L+  +C++  + +A 
Sbjct: 208 VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAM 267

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  +G  PD+V+++ LI    + G+LD A+ +   M S G  P+ + + II+   
Sbjct: 268 KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSM 327

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  ++A K   EM+ KGC   VVT+N ++N LCR  ++  A D+  +M + G  P+ 
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  L+H  CKD  M +A+   DIM  +   PDIVTYNTL+   CK G+++ A ++   
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+  SP  I+Y  +I+G   +G   +A +L  EM GKG+KP +++ +T++ G  R G 
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A  F   +   GV P++I+YN+++ G  +     +A   ++ M  +G  P   +Y +
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           ++ G   +G   ++  +L  +  +G+    S    ++
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604



 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 251/478 (52%), Gaps = 3/478 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L ++ +++    FL +M  +G  PD +   +LI   C+ G   +A ++M  +   G  P 
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V TYN LI+G CK G    A ++LD   +M +SPD  TYNT+L   C    + EA E+  
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLD---RMSVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
              +R   PD+++++ LI    +   + +A+    EM+  G  PD V Y ++ING C+ G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA++  + M   GC  +V+T+N IL  +C      +A+    EM+ +G  P   TF 
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI+  C+ G + +A+++ + M Q    P+ ++YN L+   CK  +ME+A +    M+SR
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y  L+   C  G V  A  +  ++  KG  P L++ NT+I G  + G    A
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            + L +M  +G+ PD I+Y+TL+ G  RE  +D+A A    +E  G+ P+ ITYN I+ G
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            C+  +   +   L  M+ +G  P  ++Y  LI G   +   KEA    +E+  RG V
Sbjct: 537 LCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVV 594



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 132/381 (34%), Positives = 211/381 (55%), Gaps = 3/381 (0%)

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           N  L    R   + E  +   +M  RG  PDI++ ++LI    + G+  +A      ++ 
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
           +G VPD + Y ++I+GYC+ G +  AL++ D M       DVVTYNTIL  LC +  L E
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKE 230

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A ++ +  ++R  +PD  T+T LI   CK+  + +A+ L D M  K  KPD+VTYN LI+
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           G CK G +++A +    M S    PN I++ I++   CS G   +A +   EM+ KG  P
Sbjct: 291 GICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           ++V+ N +I   CR G   +A + L KM   G  P+S+SYN L++   +++ M++A   +
Sbjct: 351 SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL 410

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
             M ++G  PD++TYN +LT  C+ G++  +  IL ++  KG +P   TY T+I+G    
Sbjct: 411 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKV 470

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
               +A +  DEM  +G  PD
Sbjct: 471 GKTDDAIKLLDEMKGKGLKPD 491


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 163/497 (32%), Positives = 259/497 (52%), Gaps = 36/497 (7%)

Query: 25   GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
            G+ PD  T N LI+  C    +   F +      +G +P   T  +L+ G+  +     A
Sbjct: 976  GIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDA 1035

Query: 85   KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             ++ DEM + GL  D  TY  L+   C+      A ++  +M +     D+ ++  +I  
Sbjct: 1036 VQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDA 1094

Query: 145  FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
              ++G    AL  F EM  AG++PD V+Y+ +++G CR G + EAL+   EM  +G   D
Sbjct: 1095 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 1154

Query: 205  VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            V TYN++++GL RA +  E     N M++RG  PD +TFT LI G CK+G + +A  + +
Sbjct: 1155 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 1214

Query: 265  IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            +M  K  +PDI+TYNTL++G C VG++E A KL+  +  R I  N  SY ILINGYC   
Sbjct: 1215 LMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 1274

Query: 325  HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM------------- 371
             + EAFR + EM  KG+KP+ V+ NT+I   C+SG    A +   +M             
Sbjct: 1275 KIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 1334

Query: 372  -----------VSEGVD-----------PDSISYNTLINGFVREENMDKAFALVSKMENQ 409
                       + E +D           P+   ++ L++G  R   +++A+    ++   
Sbjct: 1335 VLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 1394

Query: 410  GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            GL PD I YN+++ G C +G + ++  +LW+M EKG  PD  T+  +I   + +N + EA
Sbjct: 1395 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 1454

Query: 470  FRFHDEMLQRGFVPDDA 486
             +  +EM  R F PD+A
Sbjct: 1455 IQLLEEMRNRNFSPDEA 1471



 Score =  284 bits (726), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 249/457 (54%), Gaps = 1/457 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V  +  ++ I  A     EM +KG+  D  TY  LIN  C+      A +L   M G  
Sbjct: 1022 LVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-N 1080

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             K  VFTY  +I+ LCK G    A ++  EM+  G+ PD   Y++L+   CR   + EA 
Sbjct: 1081 CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 1140

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            E F EM  RG++ D+ ++++LI   SR G       +   M   G  PD   +TI+I+G 
Sbjct: 1141 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 1200

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+ G V EA ++ + M  KG   D++TYNT++NGLC    L +A  LF  + +RG+  + 
Sbjct: 1201 CKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 1260

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++  LI+G+CKD  +++A   F+ M  K +KP  VTYNTLI   C+ G +  A KL+ +
Sbjct: 1261 FSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M +        +Y +L++G C  GH+ EA  L+  +     KP +   + ++ G CR+G 
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              +A +   ++   G++PD+I+YN LING   +  + +A  L+ +ME +G +PD IT+NV
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440

Query: 421  ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            I+    ++  +H++  +L  M  +  +PD +  + L+
Sbjct: 1441 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 174/368 (47%), Gaps = 34/368 (9%)

Query: 150  QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +L+ A+  F     +  +P    +  ++    + G+      M  ++ + G   D+ T N
Sbjct: 926  KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985

Query: 210  TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
             +++  C  + +     +F   L+RG  PD  T TTL+ G   +  +  A+ LFD MT+K
Sbjct: 986  ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045

Query: 270  SIKPDIVTYNTLIDGFCKV----------------------------------GEMEKAN 295
             +  D  TY  LI+G CK                                   G   +A 
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEAL 1105

Query: 296  KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
             ++++MI   I P+ + Y  L++G C  G + EA   + EM G+GI   + + N++I G 
Sbjct: 1106 DMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL 1165

Query: 356  CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
             R+G   +   FL+ MV  G  PD+ ++  LI+G  +E  + +A  ++  M ++G  PD+
Sbjct: 1166 SRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDI 1225

Query: 416  ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            +TYN ++ G C  G++ D+  +   + ++G+  +  +Y  LING+     + EAFRF +E
Sbjct: 1226 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEE 1285

Query: 476  MLQRGFVP 483
            M  +G  P
Sbjct: 1286 MRPKGLKP 1293


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 280/484 (57%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCKD +   A+     M  +G+ P+ VTY  LI++ C+ G +++A  + + M  KG
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V+ YNSLING C+     +A+ +L+EM++ GL+P  A+Y+ L+   CRK +++ A 
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM+R GV+ ++ +F+TLI  F ++G +D A   F +M  + +VP+ V + ++I GY
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGY 520

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V +A ++ D+M+++G   D  TY ++++ LC      +A +  +++    V  + 
Sbjct: 521 CRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNS 580

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++ TTL++G CK+G + +  +++D M  + +K D++++  ++    K+ + EK + L+ +
Sbjct: 581 FSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFRE 640

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+ + +  +I+ +    ++ +A   W +M+  G  P +V+   +I   C+SG 
Sbjct: 641 MKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGY 700

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A     +M+     P+S +YN  ++    E  ++KA  L + +  +G + + +T+N 
Sbjct: 701 LSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL-EGCLANTVTFNT 759

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+ G++  +  ++    E G  PD  +Y+T+IN      ++ +AF+  +EML +G
Sbjct: 760 LIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKG 819

Query: 481 FVPD 484
             PD
Sbjct: 820 LKPD 823



 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 157/487 (32%), Positives = 271/487 (55%), Gaps = 8/487 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A C+   +D A+  L  ME KGV    V YN L+   CR   + EA ++ NSM  +G+
Sbjct: 202 IRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGI 261

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEAE 120
                TY +L+ G C+    + A E+ D+ML +   P  A+  + +V+  RK  ++ +A 
Sbjct: 262 VADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASC-SFMVDGLRKRGHIDKAF 320

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            + C +   G+ P++ + + LI    ++ +   A   FR M + GL P+ V Y I+I+  
Sbjct: 321 RLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSL 380

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +AL M D M EKG  + V  YN+++NG C+     +A  L NEM+E+G+ P  
Sbjct: 381 CKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSA 440

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++ LI G C+ G++  A+ L   M +  +  ++ T+ TLI GFCK G M++A +L+  
Sbjct: 441 ASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDK 500

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI   + PN +++ ++I GYC +G+V +AF+L+ +MV +G+ P   +  ++I   C +  
Sbjct: 501 MIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLG 560

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A KA EF+  + +  V  +S S  TL+ GF +E  + + + +  +M  +G+  D+I++ V
Sbjct: 561 AMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTV 620

Query: 421 ILTGFCRQGRMHDSELI--LWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           I+       ++HD E I  L+R M EKG+ PD   +T +I+ H  + N+ +A    D+M+
Sbjct: 621 IVYAAL---KLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMI 677

Query: 478 QRGFVPD 484
             G  P+
Sbjct: 678 ADGCSPN 684



 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 153/513 (29%), Positives = 265/513 (51%), Gaps = 35/513 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+++++  A      M ++G+  D VTY TL+  +CR   LE A ++ + M    
Sbjct: 236 LMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLH 295

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V + + +++GL K+G  D+A  +   + ++G+ P+    N L+ + C+     EAE
Sbjct: 296 FVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAE 355

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+ RG+ P+ V+++ LI    + G +D AL  F  M+  G+      Y  +INGY
Sbjct: 356 RLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGY 415

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++    +A  + +EM+EKG      +Y+ ++ GLCR   L  A +L  EM   GV  + 
Sbjct: 416 CQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNV 475

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTFTTLI G CKDGNM++A  LFD M   S+ P+ VT+N +I+G+C+VG + KA +L+  
Sbjct: 476 YTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQ 535

Query: 301 MISRKISPNYISYGILIN-----------------------------------GYCSMGH 325
           M+ R ++P+  +Y  LI+                                   G+C  G 
Sbjct: 536 MVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGR 595

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +TE + +W EM  +G+K  L+S   I+    +  D  K      +M  +GV PD++ +  
Sbjct: 596 LTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTC 655

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+   +EEN+ +A     KM   G  P+V+TY V++   C+ G +  ++++   M+   
Sbjct: 656 MIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGR 715

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             P+  TY   ++   ++  L++A   H  +L+
Sbjct: 716 FLPNSFTYNCFLDFLANEGELEKAKVLHATILE 748



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 248/484 (51%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           AL K  +   A+    EM Q     D   Y   I AYC    L+ A  L+  M  KG+K 
Sbjct: 169 ALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKG 228

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
               YN L+ GLC+  R   A EV + M++ G+  D  TY TL+   CR E +  A E+ 
Sbjct: 229 SAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMT 288

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M      P + S S ++    + G +D+A      +   G+VP+      +I+  C++
Sbjct: 289 DDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKD 348

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
               EA ++   M  +G   + VTY  +++ LC+  M+ +A  +F+ M E+G+    Y +
Sbjct: 349 RRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPY 408

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +LI+G+C+  N ++A  L + M +K + P   +Y+ LI G C+ G++  A +L  +M  
Sbjct: 409 NSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMAR 468

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             +S N  ++  LI+G+C  G++ EA RL+ +M+   + P  V+ N +I+GYCR G+  K
Sbjct: 469 NGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRK 528

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A +   +MV  G+ PD+ +Y +LI+         KA   V  +EN  +V +  +   ++ 
Sbjct: 529 AFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMY 588

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GFC++GR+ ++  I   M  +G+  D  ++T ++   +  ++ ++      EM ++G  P
Sbjct: 589 GFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKP 648

Query: 484 DDAF 487
           D+ F
Sbjct: 649 DNVF 652



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/401 (32%), Positives = 218/401 (54%), Gaps = 2/401 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CKD  +D A     +M    V P+ VT+N +I  YCR G + +AFQL + M  +G
Sbjct: 481 LISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG 540

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +TY SLI+ LC      +AKE +D++    +  ++ +  TL+   C++  ++E  
Sbjct: 541 LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETY 600

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I+ EM  RGV  D++SF+ ++    +    ++  + FREMK  G+ PDNV +T +I+ +
Sbjct: 601 HIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVH 660

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   +++AL   D+M+  GC  +VVTY  ++N LC++  L+ A  L  EML     P+ 
Sbjct: 661 SKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNS 720

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+   +     +G + KA  L   + +  +  + VT+NTLI GFCK G+++ A  L  +
Sbjct: 721 FTYNCFLDFLANEGELEKAKVLHATILEGCL-ANTVTFNTLIKGFCKAGQIQGAIDLMQN 779

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
                  P+ ISY  +IN  C +G + +AF+LW EM+ KG+KP +V+ N +I+     G+
Sbjct: 780 NTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGE 839

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
             K     S MV+     D+   N   +G    ENM + +A
Sbjct: 840 FDKGLGIYSDMVNLKYADDT-PVNHKGSGRKVIENMQQIYA 879



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 219/406 (53%)

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A +VL   L  G++    T + +L    +    + A ++F EM +     D   ++
Sbjct: 140 RARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYT 199

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
             I  +     LD A      M+S G+    V Y +++ G CRN  VLEA+++++ M+E+
Sbjct: 200 AGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVER 259

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G V D VTY T++ G CR + L  A ++ ++ML     P   + + ++ G  K G+++KA
Sbjct: 260 GIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKA 319

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             L   + +  + P++   N LID  CK     +A +L+  M +R + PN ++Y ILI+ 
Sbjct: 320 FRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHS 379

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G + +A  ++  M  KGI+ T+   N++I GYC+  +  +A   L++MV +G+ P 
Sbjct: 380 LCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPS 439

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           + SY+ LI G  R+ ++  A  L  +M   G+  +V T+  +++GFC+ G M ++  +  
Sbjct: 440 AASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFD 499

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +MI+  + P+  T+  +I G+    N+++AF+ +D+M+ RG  PD+
Sbjct: 500 KMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDN 545



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 213/421 (50%)

Query: 38  NAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS 97
           ++Y R     +A  ++      G+    +T + ++  L K  +   A+++ DEM+Q    
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP 192

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
            D   Y   +   C   N+  A  +   M  +GV    V ++ L+    RN ++  A+  
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
              M   G+V D V Y  ++ G+CR   +  AL+M D+ML    V  V + + +++GL +
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              + +A  L   + E G+ P+ +    LI   CKD    +A  LF  M  + ++P+ VT
Sbjct: 313 RGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVT 372

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           Y  LI   CK G M+ A  ++  M  + I      Y  LINGYC   +  +A  L  EMV
Sbjct: 373 YAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMV 432

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            KG+ P+  S + +I G CR GD + A E   +M   GV  +  ++ TLI+GF ++ NMD
Sbjct: 433 EKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMD 492

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           +A  L  KM +  +VP+ +T+NV++ G+CR G +  +  +  +M+++GL PD  TY +LI
Sbjct: 493 EAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552

Query: 458 N 458
           +
Sbjct: 553 S 553



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 143/290 (49%)

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           L  G  M   T + IL  L + +    A DLF+EM++     D Y +T  I  +C+  N+
Sbjct: 152 LSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNL 211

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A  L   M  K +K   V YN L+ G C+   + +A ++   M+ R I  + ++Y  L
Sbjct: 212 DGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTL 271

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + G+C    +  A  +  +M+     P++ SC+ ++ G  + G   KA      +   G+
Sbjct: 272 VYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGM 331

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+  + N LI+   ++    +A  L   M N+GL P+ +TY +++   C++G M D+  
Sbjct: 332 VPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALC 391

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +  RM EKG+      Y +LING+   +N  +A    +EM+++G  P  A
Sbjct: 392 MFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAA 441


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 153/457 (33%), Positives = 260/457 (56%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  T+N +I+  C+EG L EA  L   M   G  P V TYNSLI+G  K G  +  +++
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           + EM + G + D  TYN L+    +   M +A   F EM R+GV  ++V+FST +  F +
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +  A+  F +M+  G++P+   YT +++G C+ G + +A+ + DEM+ +G V +VVT
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y  +++GLC+   + EAD++ + M   GV  +   +TTLIHGH  + N  +AL+L + M 
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K ++ D+  Y TLI G CK  ++++A  L   M    + PN + Y  +++     G  +
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES 497

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L ++++  G +P +V+   +I G C++G  S+A    +KM   G+DP+  +Y  LI
Sbjct: 498 EAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALI 557

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +GF +  +++KA  L+++M ++G+  D + Y  ++ G+ +Q  + D+  +  +MIE GL 
Sbjct: 558 DGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQ 617

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D   YT  I+G  + N ++EA     EM+  G  PD
Sbjct: 618 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPD 654



 Score =  288 bits (736), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 153/476 (32%), Positives = 263/476 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ ++  A+     M+  G  PD VTYN+LI+ Y + G LEE  QL++ M   G
Sbjct: 206 VIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSG 265

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V TYN+LIN   K GR ++A     EM + G+  +  T++T +   C++  + EA 
Sbjct: 266 CAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAM 325

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M  RG+ P+  ++++L+    + G+LD A++   EM   GLVP+ V YT++++G 
Sbjct: 326 KLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL 385

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  +   M   G   + + Y T+++G         A DL N+M  +G+  D 
Sbjct: 386 CKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDV 445

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TLI G CKD  +++A +L   M    ++P+ V Y T++D   K G+  +A  L   
Sbjct: 446 SLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHK 505

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++     PN ++Y  LI+G C  G ++EA   + +M   G+ P + +   +I G+C+ G 
Sbjct: 506 ILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGS 565

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA   +++M+ +G+  D + Y +LI+G++++ N+  AFAL +KM   GL  D+  Y  
Sbjct: 566 LNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTC 625

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            ++GFC    M ++  +L  MI  G+ PD++ Y  LI  +    N++EA    +EM
Sbjct: 626 FISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 138/408 (33%), Positives = 235/408 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   K  +++ A  +  EM+++GV  + VT++T ++A+C+EG ++EA +L   M  +G
Sbjct: 276 LINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRG 335

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTY SL++G CK GR D A  +LDEM+  GL P+  TY  ++   C++  ++EA+
Sbjct: 336 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEAD 395

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R GV  + + ++TLI     N   +RAL    +MK+ G+  D  LY  +I G 
Sbjct: 396 NVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGL 455

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  V EA  +  +M   G   + V Y TI++ L +A   +EA  L +++L+ G  P+ 
Sbjct: 456 CKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNV 515

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK G++++A++ F+ M +  + P++  Y  LIDGFCK+G + KA  L  +
Sbjct: 516 VTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNE 575

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI + +S + + Y  LI+GY    ++ +AF L  +M+  G++  L      I G+C    
Sbjct: 576 MIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNM 635

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +A   LS+M+  G+ PD   YN LI  + +  NM++A +L ++ME+
Sbjct: 636 MQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 201/388 (51%), Gaps = 33/388 (8%)

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLD---RALMYFREMK-------------------SAG 165
           RR   P +V   TL+ + + +G LD   RAL   R+++                     G
Sbjct: 129 RRSALPSVVD--TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG 186

Query: 166 LV---------PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           LV         P+   + I+I+  C+ G ++EA  +   M   GC  DVVTYN++++G  
Sbjct: 187 LVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 246

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
           +   L E + L +EM + G   D  T+  LI+   K G M KA + F  M ++ +  ++V
Sbjct: 247 KCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVV 306

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           T++T +D FCK G +++A KL+A M  R + PN  +Y  L++G C  G + +A  L  EM
Sbjct: 307 TFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 366

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           V +G+ P +V+   ++ G C+ G  ++AD  LS M   GV  + + Y TLI+G     N 
Sbjct: 367 VHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNS 426

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           ++A  L+++M+N+G+  DV  Y  ++ G C+  ++ +++ +L +M   GL P+   YTT+
Sbjct: 427 ERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTI 486

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++         EA     ++L  GF P+
Sbjct: 487 MDALFKAGKESEAVALLHKILDSGFQPN 514


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 254/474 (53%), Gaps = 1/474 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D+  +F C + Q    PD + +  ++ +  +         L   M  +G+KP    +N 
Sbjct: 52  VDAVSLFNCLLRQNPTPPD-MEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LIN  C+ G    A  VL ++L+MG  PDT T NT +   C K  + +A     ++   G
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
              D VS+ TLI    + G+   AL   R +    +  D V+Y+ II+  C++  V +A 
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM+ +    ++VTY+ +++G C    L +A  LFN+M    + PD YTF  L+   
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 290

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+G + +A N   +M ++ IKPDIVTYN+L+DG+C V E+  A  +   M  R ++   
Sbjct: 291 CKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATV 350

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            SY I+ING+C +  V +A +L+ EM  K I P +++ N++I G C+SG  S A E +  
Sbjct: 351 RSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDL 410

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M   G  PD I+Y+++++   +   +DKA AL+ K+++QG+ P++ TY +++ G C+ GR
Sbjct: 411 MHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGR 470

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + D+  I   ++ KG N   +TYT +I G  S     EA     +M     +PD
Sbjct: 471 LEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPD 524



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 236/446 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+   I  A   L ++ + G  PDT+T NT I  +C +G + +A    + +   G
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +Y +LINGLCK G    A E+L  +    +  D   Y+T++   C+ +N+++A 
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM  R ++ +IV++S LI  F   G+L  A+  F +M S  + PD   + I+++ +
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 290

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA      M+++G   D+VTYN++++G C    +  A  + N M  RGV    
Sbjct: 291 CKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATV 350

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  +I+G CK   +++A+ LF  M  K I P+++TYN+LIDG CK G +  A +L   
Sbjct: 351 RSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDL 410

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R   P+ I+Y  +++  C    V +A  L  ++  +GI+P + +   +I G C+ G 
Sbjct: 411 MHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGR 470

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      ++ +G +    +Y  +I GF      D+A +L+SKM++   +PD ITY +
Sbjct: 471 LEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           I+     +     +E +L  MI +GL
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRGL 556



 Score =  240 bits (613), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 254/482 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +L K     +      +ME +G+ P+ V +N LIN +C+ G +  AF ++  +   G
Sbjct: 76  ILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMG 135

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T N+ I G C KG+  +A    D+++ +G   D  +Y TL+   C+      A 
Sbjct: 136 YEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 195

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   +  + V  D+V +ST+I    ++  ++ A   + EM S  +  + V Y+ +I+G+
Sbjct: 196 ELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGF 255

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A+ + ++M  +    DV T+N +++  C+   + EA +    M+++G+ PD 
Sbjct: 256 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDI 315

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+ G+C    +N A ++ + M+ + +   + +YN +I+GFCK+  +++A KL+ +
Sbjct: 316 VTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKE 375

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  ++I PN I+Y  LI+G C  G ++ A  L   M  +G +P +++ ++I+   C++  
Sbjct: 376 MHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHL 435

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L K+  +G+ P+  +Y  LI+G  +   ++ A  +   +  +G    V TY V
Sbjct: 436 VDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTV 495

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC  G   ++  +L +M +    PD  TY  +I     ++   +A +   EM+ RG
Sbjct: 496 MIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRG 555

Query: 481 FV 482
            +
Sbjct: 556 LL 557



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 236/464 (50%), Gaps = 45/464 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++++CKD  ++ A     EM  + +  + VTY+ LI+ +C  G L++A  L N M+ + 
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+T+N L++  CK+GR   AK  L  M++ G+ PD  TYN+L+   C    ++ A+
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   MS RGV   + S++ +I  F +   +D+A+  F+EM    + P+ + Y  +I+G 
Sbjct: 336 SILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  AL++ D M ++G   D++TY++IL+ LC+  ++ +A  L  ++ ++G+ P+ 
Sbjct: 396 CKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNM 455

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+T LI G CK G +  A N+F+ +  K     + TY  +I GFC  G  ++A  L + 
Sbjct: 456 YTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSK 515

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV-------------- 346
           M      P+ I+Y I+I          +A +L  EM+ +G+  + +              
Sbjct: 516 MKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPA 575

Query: 347 --------SCNT-----------IIKGYC-----RSGDASKADEFLSKMV-------SEG 375
                    C +           + + YC     +S    K  E  S ++        +G
Sbjct: 576 HFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQG 635

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              D  +Y  +I GF      D++ AL+SKME  G +PD +TY+
Sbjct: 636 YILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 248/498 (49%), Gaps = 45/498 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +  +A   L  ++ K V  D V Y+T+I++ C++  + +AF L + M  + 
Sbjct: 181 LINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRR 240

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   + TY++LI+G C  G+   A  + ++M    ++PD  T+N L+   C++  + EA+
Sbjct: 241 ISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAK 300

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M ++G+ PDIV++++L+  +    +++ A      M   G+      Y I+ING+
Sbjct: 301 NGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGF 360

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +A+K+  EM  K    +V+TYN++++GLC++  ++ A +L + M +RG  PD 
Sbjct: 361 CKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDI 420

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++++   CK+  ++KA+ L   +  + I+P++ TY  LIDG CK G +E A  ++ D
Sbjct: 421 ITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFED 480

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ +  +    +Y ++I G+CS G   EA  L  +M      P  ++   II       +
Sbjct: 481 LLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDE 540

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFV----------------REENMDKAFALVS 404
             KA++ L +M++ G+    + Y +    F+                 +E+ + A  L+ 
Sbjct: 541 NDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLE 600

Query: 405 KM-----------------------------ENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           ++                               QG + DV TY V++ GFC  G   +S 
Sbjct: 601 RIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESL 660

Query: 436 LILWRMIEKGLNPDRSTY 453
            +L +M   G  PD  TY
Sbjct: 661 ALLSKMEVNGCIPDAVTY 678



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 190/386 (49%), Gaps = 38/386 (9%)

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           I SFST     + N  +D A+  F  +      P ++ +  I+    ++      L +  
Sbjct: 36  IHSFSTSTTFHNNNDVVD-AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQ 94

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           +M  +G   + V +N ++N  C+  ++  A  +  ++L+ G  PD  T  T I G C  G
Sbjct: 95  KMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKG 154

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK------------------ 296
            +++ALN  D +       D V+Y TLI+G CKVGE   A +                  
Sbjct: 155 QIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYS 214

Query: 297 -----------------LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
                            L+++M+SR+IS N ++Y  LI+G+C +G + +A  L+ +M  +
Sbjct: 215 TIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSE 274

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
            I P + + N ++  +C+ G   +A   L+ M+ +G+ PD ++YN+L++G+     ++ A
Sbjct: 275 NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMA 334

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLIN 458
            ++++ M ++G+   V +YN+++ GFC+  +M D  + L++ M  K + P+  TY +LI+
Sbjct: 335 KSILNTMSHRGVTATVRSYNIVINGFCKI-KMVDQAMKLFKEMHHKQIFPNVITYNSLID 393

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G      +  A    D M  RG  PD
Sbjct: 394 GLCKSGRISYALELIDLMHDRGQQPD 419


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 152/477 (31%), Positives = 259/477 (54%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           ++ +D A      + ++   P    +N ++ +  +         L   M  +G+KP +  
Sbjct: 63  NNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 122

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            N LIN  C+ G    A  V  ++L+MG  PDT T+ TL+   C K  + +A     ++ 
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVV 182

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G   D +S+ TLI    + G+   AL   + +    + P+ V+Y  II+  C+   V 
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EA  +  EM+ KG   DVVTY+ +++G C    L +A DLFN+M+   + PD YTF  L+
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +  CKDG M +   +FD+M ++ IKP+ VTYN+L+DG+C V E+ KA  ++  M    ++
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+  SY I+ING+C +    EA  L+ EM  K I P +V+ +++I G  +SG  S A + 
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           + +M   GV P   +YN++++   +   +DKA AL++K++++G+ P++ TY++++ G C+
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G++ D+  +   ++ KG N +  TYT +I G   +    EA     +M   G +PD
Sbjct: 483 SGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 255/448 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+   I  A     ++ + G  PDT+T+ TLI   C +G +++AF   + +   G
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +Y +LI+GLCK G    A ++L  +    + P+   YNT++   C+ + ++EA 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  +G++PD+V++S LI  F   G+L+ A+  F +M    + PD   + I++N +
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G + E   + D M+++G   + VTYN++++G C  K + +A  +FN M + GV PD 
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++ +I+G CK    ++A+NLF  M +K+I PD+VTY++LIDG  K G +  A +L   
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + P   +Y  +++  C +  V +A  L  ++  KGI+P + + + +IKG C+SG 
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +    ++ +G + +  +Y  +I GF  E   ++A AL+SKME+ G +PD  TY +
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNP 448
           I+    ++     +E +L  MI +G+ P
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 256/464 (55%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME +G+ P+ V  N LIN +C+ G +  AF +   +   G  P   T+ +LI GLC KG
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKG 169

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A    D+++ +G   D  +Y TL+   C+      A ++   +    V P++V ++
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    +   ++ A   F EM S G+ PD V Y+ +I+G+C  G + +A+ + ++M+ +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE 289

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               DV T+N ++N  C+   + E   +F+ M+++G+ P+F T+ +L+ G+C    +NKA
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            ++F+ M Q  + PDI +Y+ +I+GFCK+ + ++A  L+ +M  + I P+ ++Y  LI+G
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
               G ++ A +L  +M  +G+ PT+ + N+I+   C+     KA   L+K+  +G+ P+
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +Y+ LI G  +   ++ A  +   +  +G   +V TY +++ GFC +G  +++  +L 
Sbjct: 470 MYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLS 529

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +M + G  PD  TY  +I     ++    A +   EM+ RG  P
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 228/442 (51%), Gaps = 5/442 (1%)

Query: 48  EAFQLM-----NSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTAT 102
           ++FQ +     N +     K    +Y+S           D A  + + +L+   +P    
Sbjct: 28  QSFQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFE 87

Query: 103 YNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
           +N +L    + ++      +  +M  RG+ P++V+ + LI  F + G +  A   F ++ 
Sbjct: 88  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
             G VPD + +T +I G C  G + +A    D+++  G   D ++Y T+++GLC+     
Sbjct: 148 KMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
            A DL   +    V P+   + T+I   CK   +N+A +LF  M  K I PD+VTY+ LI
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALI 267

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            GFC +G++  A  L+  MI   I P+  ++ IL+N +C  G + E   ++  M+ +GIK
Sbjct: 268 SGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P  V+ N+++ GYC   + +KA    + M   GV+PD  SY+ +INGF + +  D+A  L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M  + ++PDV+TY+ ++ G  + GR+  +  ++ +M ++G+ P   TY ++++    
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCK 447

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
            + + +A     ++  +G  P+
Sbjct: 448 IHQVDKAIALLTKLKDKGIQPN 469



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 216/382 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +  +A   L  ++   V P+ V YNT+I++ C+   + EAF L + M  KG
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKG 255

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY++LI+G C  G+ + A ++ ++M+   + PD  T+N L+   C+   M E +
Sbjct: 256 ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M ++G+ P+ V++++L+  +    ++++A   F  M   G+ PD   Y+I+ING+
Sbjct: 316 TVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+     EA+ +  EM  K  + DVVTY+++++GL ++  ++ A  L ++M +RGV P  
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTI 435

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++   CK   ++KA+ L   +  K I+P++ TY+ LI G C+ G++E A K++  
Sbjct: 436 RTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEG 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ +  + N  +Y I+I G+C  G   EA  L  +M   G  P   +   II    +  +
Sbjct: 496 LLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555

Query: 361 ASKADEFLSKMVSEGVDPDSIS 382
              A++ L +M++ GV P  I+
Sbjct: 556 NDMAEKLLREMIARGVRPRQIA 577


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 161/480 (33%), Positives = 259/480 (53%), Gaps = 3/480 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C+D  + S   FL EM ++ + PD  T+N LIN  C EG  +++  LM  M   G  P +
Sbjct: 172 CEDVSVWS---FLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTI 228

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TYN++++  CKKGR   A E+LD M   G++ D  TYN L+ + CR    ++   +  +
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRD 288

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M +R + P+ V+++TL+  FS  G++  A     EM + GL P++V +  +I+G+   G 
Sbjct: 289 MRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGN 348

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
             EALKM   M  KG +   V+Y  +L+GLC+      A   +  M   GV     T+T 
Sbjct: 349 FKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           +I G CK+G +++A+ + + M++  I PDIVTY+ LI+GFC+VG ++ A ++   +    
Sbjct: 409 MIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVG 468

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           +SPN I Y  LI   C MG + E  R++  M+ +G  P   + N ++   C++G  ++A+
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAE 528

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           EF+  M S+G+ P+++S++ LING+       KAF++  +M   G  P   TY  +L G 
Sbjct: 529 EFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C+ G +  +E  L  +       D     TLI       NL +A     EM+QR  +PD 
Sbjct: 589 CKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDS 648



 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 266/520 (51%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC +     +   + +ME+ G  P  VTYNT+++ YC++G  + A +L++ M+ KG
Sbjct: 199 LINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKG 258

Query: 61  LKPGVFTYNSLINGLCKKGRCDR-----------------------------------AK 85
           +   V TYN LI+ LC+  R  +                                   A+
Sbjct: 259 VNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIAR 318

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++L+EML  GLSP+  T+N L+     + N  EA ++F  M  +G+    VS+  L+   
Sbjct: 319 QLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGL 378

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +N + D A  ++  MK  G+    + YT +I+G C+NGF+ EA+ M +EM + G   D+
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDI 438

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY+ ++NG CR   L  A ++   +   G+ P+   ++TLI+  C+ G + + + +++ 
Sbjct: 439 VTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEA 498

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  +   PD  T+N L+   CK G++ +A +    M S  I PN +S+  LINGY S G 
Sbjct: 499 MILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGE 558

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +AF ++ EM   G  PT  +  +++KG C+ G    A++FL  + +     D++  NT
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNT 618

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI    +  N+DKA +L  +M  + ++PD  TY  +++G CR+G+   + L       +G
Sbjct: 619 LITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 446 -LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            L P++  YT  ++G       K  F F  +M + G   D
Sbjct: 679 NLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRD 718



 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 250/520 (48%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+ ++     + L +M ++ ++P+ VTYNTL+N +  EG +  A QL+N M   G
Sbjct: 269 LIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFG 328

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   T+N+LI+G   +G    A ++   M   GL     +Y  LL   C+      A 
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLAR 388

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  M R GV    ++++ +I    +NG LD A++   EM   G+ PD V Y+ +ING+
Sbjct: 389 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGF 448

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A ++   +   G   + + Y+T++   CR   L E   ++  M+  G  PD 
Sbjct: 449 CRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDH 508

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF  L+   CK G + +A      MT   I P+ V+++ LI+G+   GE  KA  ++ +
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDE 568

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P + +YG L+ G C  GH+  A +    +         V CNT+I   C+SG+
Sbjct: 569 MTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGN 628

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVRE--------------------------- 393
             KA     +MV   + PDS +Y +LI+G  R+                           
Sbjct: 629 LDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYT 688

Query: 394 ---ENMDKA------FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
              + M KA      F    +M+  GL  DV+T N ++ G+ R G++  +  +L+ M  +
Sbjct: 689 CFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQ 748

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              P+ +TY  L++G+  + ++  +F  +  M+  G +PD
Sbjct: 749 NQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPD 788



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 229/452 (50%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            ++ LI  Y REG ++++ ++   M   G  P V+T N+++  + K          L EM
Sbjct: 125 VFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEM 184

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           L+  + PD AT+N L+   C + +  ++  +  +M + G AP IV+++T++  + + G+ 
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
             A+     M   G+  D   Y ++I+  CR+    +   +  +M ++    + VTYNT+
Sbjct: 245 KAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           LNG      +  A  L NEML  G+ P+  TF  LI GH  +GN  +AL +F +M  K +
Sbjct: 305 LNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGL 364

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
               V+Y  L+DG CK  E + A   +  M    +    I+Y  +I+G C  G + EA  
Sbjct: 365 IGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +  EM   GI P +V+ + +I G+CR G    A E + ++   G+ P+ I Y+TLI    
Sbjct: 425 MLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           R   + +   +   M  +G  PD  T+NV++T  C+ G++ ++E  +  M   G+ P+  
Sbjct: 485 RMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAV 544

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           ++  LING+ S     +AF   DEM + G  P
Sbjct: 545 SFDCLINGYGSSGEGLKAFSVFDEMTKVGHHP 576



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 243/493 (49%), Gaps = 10/493 (2%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  LCK   + +A+ FL  ++      DTV  NTLI A C+ G L++A  L   M  + 
Sbjct: 584  LLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRS 643

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
            + P  FTY SLI+GLC+KG+   A     E    G L P+   Y T  V+   K    +A
Sbjct: 644  ILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMY-TCFVDGMFKAGQWKA 702

Query: 120  EEIF-CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
               F  +M + G+  D+V+ + +I  +SR G++++      EM +    P+   Y I+++
Sbjct: 703  GFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLH 762

Query: 179  GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            GY +   V  +  +   M+  G + D +T  +I+ G+C + ML     +    + RGV  
Sbjct: 763  GYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEV 822

Query: 239  DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
            D +TF  LI   C +G +N A ++ ++MT   I  D  T + ++    +    +++  + 
Sbjct: 823  DRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVL 882

Query: 299  ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             +M  + ISP    Y  L+NG C +G +  AF +  EM+   I P  V+ + +++   + 
Sbjct: 883  HEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942

Query: 359  GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
            G A +A   L  M+   + P   S+ TL++ F +  N+ +A  L   M N GL  D+++Y
Sbjct: 943  GKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSY 1002

Query: 419  NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD---- 474
            NV++TG C +G M  +  +   M   G   + +TY  L+ G +SQ      F   D    
Sbjct: 1003 NVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGT---EFSGTDIILK 1059

Query: 475  EMLQRGFVPDDAF 487
            ++L RGF+   +F
Sbjct: 1060 DLLARGFITAMSF 1072



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 206/386 (53%)

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
           + + ++ L+    R+  + ++ EIF  M   G  P + + + ++G   ++ +      + 
Sbjct: 122 NPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFL 181

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
           +EM    + PD   + I+IN  C  G   ++  +  +M + G    +VTYNT+L+  C+ 
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
                A +L + M  +GV  D  T+  LIH  C+     K   L   M ++ I P+ VTY
Sbjct: 242 GRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTY 301

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           NTL++GF   G++  A +L  +M++  +SPN++++  LI+G+ S G+  EA ++++ M  
Sbjct: 302 NTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEA 361

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           KG+  T VS   ++ G C++ +   A  F  +M   GV    I+Y  +I+G  +   +D+
Sbjct: 362 KGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  ++++M   G+ PD++TY+ ++ GFCR GR+  ++ I+ R+   GL+P+   Y+TLI 
Sbjct: 422 AVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIY 481

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
                  LKE  R ++ M+  G  PD
Sbjct: 482 NCCRMGCLKETIRIYEAMILEGNTPD 507



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 138/338 (40%), Gaps = 39/338 (11%)

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++ FV  AL     +    C  +   ++ ++    R  M+ ++ ++F  M   G  P  Y
Sbjct: 104 KSSFVFGALMATYRL----CNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 159

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T   ++    K        +    M ++ I PD+ T+N LI+  C  G  +K++ L   M
Sbjct: 160 TCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKM 219

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
                +P  ++Y  +++ YC  G    A  L   M  KG+   + + N +I   CRS  +
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRS 279

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGF------------------------------- 390
           +K    L  M    + P+ ++YNTL+NGF                               
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNAL 339

Query: 391 ----VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
               + E N  +A  +   ME +GL+   ++Y V+L G C+      +     RM   G+
Sbjct: 340 IDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              R TYT +I+G      L EA    +EM + G  PD
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPD 437



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 89/183 (48%)

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R  + N   + ILI  Y   G + ++  ++  M   G  P++ +CN I+    +S +   
Sbjct: 117 RLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVS 176

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
              FL +M+   + PD  ++N LIN    E +  K+  L+ KME  G  P ++TYN +L 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +C++GR   +  +L  M  KG+N D  TY  LI+     N   + +    +M +R   P
Sbjct: 237 WYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHP 296

Query: 484 DDA 486
           ++ 
Sbjct: 297 NEV 299


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 261/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK    D A+    +M   G  P+  TYN LI+ Y   G  +E  Q++  MS +G
Sbjct: 240 VIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARG 299

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TY SL+N LCK GRC  A+   D M++ G+ P  +TY  L+     K  +SE  
Sbjct: 300 LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMH 359

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M   G++PD   F+     +++ G +D+A+  F +M+  GL P+ V Y  +I+  
Sbjct: 360 SFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDAL 419

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A    ++M+ +G   ++V +N+++ GLC       A++L  EML++G+ P+ 
Sbjct: 420 CKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNA 479

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F TLI   C  G + +   L D+M    ++PD  +Y  LI G+C  G  ++A K++  
Sbjct: 480 VFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDG 539

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  +SP  ++Y  L++GYCS   + +A+ L+ EM+ KG+ P +V+ NTI+ G  ++  
Sbjct: 540 MVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 599

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A E    M++ G   D  +YN ++NG  +   +D+AF +   + ++GL  ++IT+ +
Sbjct: 600 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 659

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  D+  +   +   GL P+  TY  +    + + +L+E       M + G
Sbjct: 660 MIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 719

Query: 481 FVPD 484
             P+
Sbjct: 720 TAPN 723



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 250/484 (51%), Gaps = 3/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQ---KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++  LC + + + A   L  M     +   P+ V+Y+ +IN +  EG +++ + L   M 
Sbjct: 167 LLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMI 226

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            +G+ P V TY ++I+GLCK    DRA+ V  +M+  G  P+  TYN L+          
Sbjct: 227 DRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWK 286

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           E  ++  EMS RG+ PD  ++ +L+    +NG+   A  +F  M   G+ P    Y I+I
Sbjct: 287 EVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILI 346

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +GY   G + E     D M+E G   D   +N   +   +  M+ +A D+FN+M + G+ 
Sbjct: 347 HGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS 406

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+   +  LI   CK G ++ A   F+ M  + + P+IV +N+L+ G C V + E+A +L
Sbjct: 407 PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 466

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M+ + I PN + +  LI   C++G V E  RL   M   G++P   S   +I GYC 
Sbjct: 467 VYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCL 526

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +G   +A++    MVS G+ P  ++YNTL++G+     +D A+ L  +M  +G+ P V+T
Sbjct: 527 TGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVT 586

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN IL G  +  R  +++ +   MI  G   D  TY  ++NG    N + EAF+    + 
Sbjct: 587 YNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLC 646

Query: 478 QRGF 481
            +G 
Sbjct: 647 SKGL 650



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 247/497 (49%), Gaps = 39/497 (7%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P+  TY+ LI  +CR G LE  F     +   G +      N L+ GLC   R   A 
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 86  EVL-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI---------------------- 122
           +VL   M ++G  PDT +Y  LL   C ++   EA E+                      
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205

Query: 123 ----------------FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
                           F EM  RG+ PD+V+++T+I    +    DRA   F++M   G 
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            P+N  Y  +I+GY   G   E ++M +EM  +G   D  TY ++LN LC+     EA  
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
            F+ M+ +G+ P   T+  LIHG+   G +++  +  D+M +  + PD   +N     + 
Sbjct: 326 FFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYA 385

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G ++KA  ++  M    +SPN ++YG LI+  C +G V +A   + +M+ +G+ P +V
Sbjct: 386 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 445

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
             N+++ G C      +A+E + +M+ +G+ P+++ +NTLI        + +   L+  M
Sbjct: 446 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 505

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           E+ G+ PD  +Y  +++G+C  GR  ++E +   M+  GL+P   TY TL++G+ S + +
Sbjct: 506 EHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 565

Query: 467 KEAFRFHDEMLQRGFVP 483
            +A+    EML++G  P
Sbjct: 566 DDAYCLFREMLRKGVTP 582



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 243/484 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N    + ++D       EM  +G+ PD VTY T+I+  C+    + A  +   M   G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP  +TYN LI+G    G+     ++L+EM   GL PD  TY +LL   C+     EA 
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M R+G+ P + ++  LI  ++  G L     +   M   GL PD+ ++ I  + Y
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + +A+ + ++M + G   +VV Y  +++ LC+   + +A+  FN+M+  GV P+ 
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F +L++G C      +A  L   M  + I P+ V +NTLI   C VG + +  +L   
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 504

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + P+  SY  LI+GYC  G   EA +++  MV  G+ PT V+ NT++ GYC +  
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M+ +GV P  ++YNT+++G  + +   +A  L   M N G   D+ TYN+
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL G C+   + ++  +   +  KGL  +  T+T +I   +     ++A      +   G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684

Query: 481 FVPD 484
            VP+
Sbjct: 685 LVPN 688



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 239/481 (49%), Gaps = 6/481 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ +   A+ F   M +KG+ P   TY  LI+ Y  +G L E    ++ M   G
Sbjct: 310 LLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENG 369

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    +N   +   K G  D+A ++ ++M Q GLSP+   Y  L+   C+   + +AE
Sbjct: 370 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 429

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M   GV P+IV F++L+       + +RA     EM   G+ P+ V +  +I   
Sbjct: 430 VKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNL 489

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V+E  ++ D M   G   D  +Y  +++G C      EA+ +F+ M+  G+ P  
Sbjct: 490 CNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTE 549

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TL+HG+C    ++ A  LF  M +K + P +VTYNT++ G  +     +A +L+ +
Sbjct: 550 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 609

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI+     +  +Y I++NG C    V EAF+++  +  KG++  +++   +I    + G 
Sbjct: 610 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 669

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  + + + G+ P+ ++Y  +    + E ++++  +L S ME  G  P+    N 
Sbjct: 670 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 729

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS------QNNLKEAFRFHD 474
           ++     +G +  +   L ++ E+  + + ST + L++   S        +L E + F +
Sbjct: 730 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSLPEKYHFLN 789

Query: 475 E 475
           E
Sbjct: 790 E 790



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 231/460 (50%), Gaps = 12/460 (2%)

Query: 39  AYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV----LDEMLQM 94
           A  R   L++A +L + +        V  +N L+  +  + RC  A E+     + M++ 
Sbjct: 23  ARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAV-SRARCSSASELAVSHFNRMVRE 81

Query: 95  ---GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
               ++P+  TY+ L+   CR  ++      F  + + G   D ++ + L+       ++
Sbjct: 82  CSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRV 141

Query: 152 DRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE---KGCVMDVVT 207
             A+ +  + M   G +PD V YTI++ G C      EAL++   M +   + C  +VV+
Sbjct: 142 GEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVS 201

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+ ++NG      + +  +LF EM++RG+ PD  T+TT+I G CK    ++A  +F  M 
Sbjct: 202 YSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI 261

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
               KP+  TYN LI G+  +G+ ++  ++  +M +R + P+  +YG L+N  C  G   
Sbjct: 262 DNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCR 321

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA   +  M+ KGIKP + +   +I GY   G  S+   FL  MV  G+ PD   +N   
Sbjct: 322 EARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFF 381

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           + + +   +DKA  + +KM   GL P+V+ Y  ++   C+ GR+ D+E+   +MI +G+ 
Sbjct: 382 SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 441

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           P+   + +L+ G  + +  + A     EML +G  P+  F
Sbjct: 442 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVF 481


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 150/465 (32%), Positives = 251/465 (53%), Gaps = 11/465 (2%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            L  + Q G+ P     N +++       L+EA +L   +  K     V +YN L+  LC
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLP----LDEAIELFQGLPDKN----VCSYNILLKVLC 273

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
             GR + A+++ DEM      PD  TY  L+   C    +  A ++  +M  RGV P+  
Sbjct: 274 GAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNAT 330

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
            +++++ +    G++  AL    +M    ++ D  +YT +++G+C  G ++ A +  DEM
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             KG   D VTY T++NGLCRA  L EA+ +  EML R +  D  T+T L+ G+CK G M
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            +A  + + M Q+ + P++VTY  L DG CK G+++ AN+L  +M ++ +  N  +Y  L
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 510

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ING C  G++ +A R   +M   G+KP + +  T+I   C+SG+  +A + L +M+  G+
Sbjct: 511 INGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGI 570

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P  ++YN L+NGF     ++    L+  M  + + P+  TYN ++  +C    M  +  
Sbjct: 571 KPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTE 630

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           I   M  + + P+ +TY  LI GH    ++KEA  FH+EM+++GF
Sbjct: 631 IYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGF 675



 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 262/486 (53%), Gaps = 3/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +++ A+    EM      PD VTY  LI+ YC  G LE A +L++ M  +G
Sbjct: 268 LLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARG 324

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P    Y S++  LC KGR   A  V+++M+   +  D A Y T+L   C K ++  A 
Sbjct: 325 VEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSAR 384

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F EM R+G+A D V+++TLI    R G+L  A    +EM +  L  D V YT++++GY
Sbjct: 385 RWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGY 444

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA ++ + M+++G   +VVTY  + +GLC+   +  A++L +EM  +G+  + 
Sbjct: 445 CKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNA 504

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI+G CK G +++A+     M    +KPD+ TY TLID  CK GE+++A+ L  +
Sbjct: 505 CTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQE 564

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   I P  ++Y +L+NG+C  G V    +L   M+ K I P   + N+++K YC   +
Sbjct: 565 MLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNN 624

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    M S  V+P+  +YN LI G  +  +M +A    ++M  +G      +Y+ 
Sbjct: 625 MKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSA 684

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++ +  ++  +   M ++G   +   Y   I+ + +++NL+      DE+++  
Sbjct: 685 LIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEAS 744

Query: 481 FVPDDA 486
            V   A
Sbjct: 745 IVKSKA 750


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 265/484 (54%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  CK  ++D A     EM     +P  + +N +++++ +      A  L + +  KG
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSR-FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKG 337

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +FT N LIN  C  G+      VL ++L+ G  P T T NTL+   C K  + +A 
Sbjct: 338 IQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKAL 397

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               ++  +G   + VS++TLI    + G    A+   R++      P+  +Y+ II+  
Sbjct: 398 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 457

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA  +  EM  KG   DVVTY+T++ G C    L EA  L NEM+ + + PD 
Sbjct: 458 CKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDV 517

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T L+    K+G + +A ++  +M +  +KPD+ TYNTL++G+  V E++KA  ++  
Sbjct: 518 RTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNA 577

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    ++P+  +Y ILING+C    V EA  L+ EM  K + P  V+ ++++ G C+SG 
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S   + + +M   G   D I+YN+LI+G  +  ++DKA AL +KM++QG+ P+  T+ +
Sbjct: 638 ISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTI 697

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C+ GR+ D++ +   ++ KG + D   Y  +I GH  Q  L+EA     +M + G
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757

Query: 481 FVPD 484
            +P+
Sbjct: 758 CIPN 761



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 149/447 (33%), Positives = 250/447 (55%), Gaps = 2/447 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I      L ++ ++G  P TVT NTLI   C +G +++A    + +  +G
Sbjct: 348 LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 407

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +LING+CK G    A ++L ++      P+   Y+T++   C+ + +SEA 
Sbjct: 408 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 467

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ +G++ D+V++STLI  F   G+L  A+    EM    + PD   YTI+++  
Sbjct: 468 GLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527

Query: 181 CRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            + G V EA  +   ML K CV  DV TYNT++NG      + +A  +FN M   GV PD
Sbjct: 528 GKEGKVKEAKSVLAVML-KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPD 586

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+T LI+G CK   +++ALNLF  M QK++ PD VTY++L+DG CK G +     L  
Sbjct: 587 VHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLID 646

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R    + I+Y  LI+G C  GH+ +A  L+ +M  +GI+P   +   ++ G C+ G
Sbjct: 647 EMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 706

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A E    ++++G   D   YN +I G  ++  +++A  ++SKME  G +P+ +T++
Sbjct: 707 RLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFD 766

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGL 446
           +I+    ++     +E +L +MI +GL
Sbjct: 767 IIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 252/467 (53%), Gaps = 1/467 (0%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           L ++ ++G  PDTVT NTLI   C +G ++EA    + +  +G +    +Y +LING+C+
Sbjct: 51  LTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCR 110

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
            G    A + L ++      P+   YNT++   C+ + +SEA  +F EM+ +G++ ++V+
Sbjct: 111 IGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVT 170

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           +STLI  F   G+L  AL     M    + P+   Y I+++  C+ G V EA  +   ML
Sbjct: 171 YSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVML 230

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           +     +V+TY+T+++G      + +A  +FN M   GV PD +++  +I+G CK   ++
Sbjct: 231 KACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVD 290

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           KALNLF  M      P I+ +N ++D F K+     A  L   +  + I P+  +  ILI
Sbjct: 291 KALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILI 349

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           N +C MG +T  F +  +++ +G  P+ V+ NT+IKG C  G   KA  F  K++++G  
Sbjct: 350 NCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 409

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
            + +SY TLING  +  +   A  L+ K++ +   P+V  Y+ I+   C+   + ++  +
Sbjct: 410 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 469

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              M  KG++ D  TY+TLI G      LKEA    +EM+ +   PD
Sbjct: 470 FSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPD 516



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 152/518 (29%), Positives = 259/518 (50%), Gaps = 34/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N +C+     +A  FL +++ +   P+   YNT+I+A C+   + EA+ L + M+ KG
Sbjct: 104 LINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKG 163

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V TY++LI G C  G+   A  +L+ M+   ++P+  TYN L+   C++  + EA+
Sbjct: 164 ISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAK 223

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M +  V  +++++STL+  +    ++ +A   F  M   G+ PD   Y I+ING+
Sbjct: 224 SVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGF 283

Query: 181 CRNGFVLEALKMRDEML----------------------------------EKGCVMDVV 206
           C+   V +AL +  EM+                                   KG   D+ 
Sbjct: 284 CKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLF 343

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T N ++N  C    +T    +  ++L+RG  P   T  TLI G C  G + KAL+  D +
Sbjct: 344 TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKL 403

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             +  + + V+Y TLI+G CK+G+   A KL   +  R   PN   Y  +I+  C    V
Sbjct: 404 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 463

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           +EA+ L+ EM  KGI   +V+ +T+I G+C  G   +A   L++MV + ++PD  +Y  L
Sbjct: 464 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTIL 523

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           ++   +E  + +A ++++ M    + PDV TYN ++ G+     +  ++ +   M   G+
Sbjct: 524 VDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGV 583

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            PD  TYT LING      + EA     EM Q+  VPD
Sbjct: 584 TPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPD 621



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 246/463 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            +E KG+ PD  T N LIN +C  G +   F ++  +  +G  P   T N+LI GLC KG
Sbjct: 332 RLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKG 391

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A    D++L  G   +  +Y TL+   C+  +   A ++  ++  R   P++  +S
Sbjct: 392 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYS 451

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    +   +  A   F EM   G+  D V Y+ +I G+C  G + EA+ + +EM+ K
Sbjct: 452 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLK 511

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               DV TY  +++ L +   + EA  +   ML+  V PD +T+ TL++G+     + KA
Sbjct: 512 TINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKA 571

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            ++F+ M+   + PD+ TY  LI+GFCK   +++A  L+ +M  + + P+ ++Y  L++G
Sbjct: 572 QHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDG 631

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G ++  + L  EM  +G    +++ N++I G C++G   KA    +KM  +G+ P+
Sbjct: 632 LCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPN 691

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           + ++  L++G  +   +  A  +   +  +G   DV  YNV++ G C+QG + ++  +L 
Sbjct: 692 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLS 751

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +M E G  P+  T+  +IN    ++   +A +   +M+ RG +
Sbjct: 752 KMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 203/361 (56%), Gaps = 1/361 (0%)

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  ++ +RG  PD V+ +TLI      GQ+  AL +  ++ + G   + V Y  +ING 
Sbjct: 49  SVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGV 108

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G    A+K   ++  +    +V  YNTI++ LC+ ++++EA  LF+EM  +G+  + 
Sbjct: 109 CRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANV 168

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI+G C  G + +AL L ++M  K+I P++ TYN L+D  CK G++++A  + A 
Sbjct: 169 VTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAV 228

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   +  N I+Y  L++GY  +  V +A  ++  M   G+ P + S N +I G+C+   
Sbjct: 229 MLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKR 288

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA     +M+     P  I +N +++ F + ++   A +L  ++E +G+ PD+ T N+
Sbjct: 289 VDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNI 347

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++  FC  G++     +L +++++G  P   T  TLI G   +  +K+A  FHD++L +G
Sbjct: 348 LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 407

Query: 481 F 481
           F
Sbjct: 408 F 408


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/471 (33%), Positives = 256/471 (54%), Gaps = 12/471 (2%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           + SA + L  + Q G+ P   + N ++   CR   L+EA QL   +  K       +YN 
Sbjct: 208 LPSAPLLL-RLRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELPEKN----TCSYNI 258

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+  LC  GR   A ++ DEM      PD  TY  ++   C    +  A ++  EM+ RG
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +  + V+++++I +    GQ+  A+    +M   G+V D  ++T +++G+CR G +  A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
              DEM ++G   D VTY  ++NGLCRA  L EA+ +  EM ++G+  D  T+T LI G+
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK G M +A  + + M QK + P++VTY  L DG CK G++  AN+L  +M S+ +  N 
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +Y  LING C  G++ +A R   +M   G+KP + +  TII   C+S +  +A   L +
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ +G+ P  ++YN L+NGF     ++    L+  M  + + P+  TYN ++  +C +  
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           M  +  I   M+ + + P+ +TY  LI GH    N+KEA  FH EM+++GF
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666



 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 263/482 (54%), Gaps = 3/482 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC   +I  A     EM      PD VTY  +++ YC    LE A +L++ M+ +G
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+     Y S+I  LC +G+   A  V+++M+  G+  D A + T++   CRK +++ A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F EM +RG+A D V+++ LI    R G+L  A    +EM+  GL  D V YT++I+GY
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + ++M++K    +VVTY  + +GLC+   +  A++L +EM  +G+  + 
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +LI+G CK GN+ +A+     M +  +KPD+ TY T+I   C+  E+++A+ L  +
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + I P  ++Y +L+NG+C  G V    RL   M+ K I P   + N+++K YC   +
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    M+S+ V P+  +YN LI G  +  NM +A    S+M  +G      +YN 
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++ +  ++  +  +M ++ L  +   Y   I+   +++NL+      DE+++  
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVT 735

Query: 481 FV 482
            V
Sbjct: 736 LV 737



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 213/415 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC + ++  A   + +M   GV  D   + T+++ +CR+G L  A    + M  +G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L     TY +LINGLC+ G    A+ VL EM   GL  D  TY  L+   C+   M+EA 
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M ++ V P++V+++ L     + G +  A     EM S GL  +   Y  +ING 
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A++   +M E G   DV TY TI+  LC++K L  A  L  EML++G+ P  
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L++G C  G +     L + M +K+I P+  TYN+L+  +C    M+   +++  
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+++ PN  +Y ILI G+C   ++ EA     EM+ KG + T  S N +I+   +   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            ++A     KM  E +  +   YN  I+    E+N++   AL  ++    LV  +
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSI 740



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           GI P+  SCN ++   CR       DE + ++  E  + ++ SYN L+        +  A
Sbjct: 221 GISPSPESCNAVL---CRL----PLDEAV-QLFQELPEKNTCSYNILLKALCTAGRIKDA 272

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             L  +M +    PDV+TY +++ G+C    +  +  +L  M  +GL  +   YT++I  
Sbjct: 273 HQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              +  + +A R  ++M+  G V D A
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAA 356


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 152/466 (32%), Positives = 266/466 (57%), Gaps = 1/466 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM + G  P   + + L+    ++G    A  + + + G G+ P V+  + ++N  C+ G
Sbjct: 181 EMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVG 240

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R D A EVL++M++ GL P+  TYN L+     + +    E +   MS RGV+ ++V+ +
Sbjct: 241 RVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCT 300

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGL-VPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
            L+  + + G++D A    RE++   L V D  +Y ++++GYC+ G + +A+++RDEML 
Sbjct: 301 MLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLR 360

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G  +++V  NT++ G C+   + EA+ +F  M++  + PD Y++ TL+ G+C++G ++K
Sbjct: 361 VGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSK 420

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  L + M    I P +VTYNT+I G   VG  + A  LW  M+ R ++PN IS   +++
Sbjct: 421 AFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLD 480

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            +  MG    A  LW E++G+G   + V+ NT+I G C+ G   +A     +M   G+ P
Sbjct: 481 CFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP 540

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D I+Y TL +G+ +  N+ +AF +   ME Q +   +  YN ++ G  +  +++D   +L
Sbjct: 541 DEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLL 600

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             M  +GL+P+  TY TLI+G   +  L +AF  + EM++RGF P+
Sbjct: 601 VEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPN 646



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 269/489 (55%), Gaps = 9/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQ-KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   CK  K+D A+  L E+E+ + +  D   Y  L++ YC+ G +E+A ++ + M   
Sbjct: 302 LMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRV 361

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GLK  +   N+LI G CK G+   A+ V   M+   L PD  +YNTLL   CR+  +S+A
Sbjct: 362 GLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKA 421

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM   G+ P +V+++T+I      G  D AL  +  M   G+ P+ +    +++ 
Sbjct: 422 FMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDC 481

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + + G    A+ +  E+L +G     V +NT+++GLC+   L EA  +F+ M E G+ PD
Sbjct: 482 FFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPD 541

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL  G+CK+GN+ +A  +  +M ++++   I  YN+LIDG  K+ ++     L  
Sbjct: 542 EITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLV 601

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M +R +SPN ++YG LI+G+C    + +AF L++EM+ +G  P +V C+ I+    R  
Sbjct: 602 EMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDD 661

Query: 360 DASKADEFLSKMVSEGVDPDSIS-YNTLINGFVREENMDKAFALVSKMENQGL---VPDV 415
             S+A   L KM    +D D ++ +N   +  V+ +   +A  +   ++   +   + + 
Sbjct: 662 RISEATVILDKM----LDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNN 717

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           I YN+ + G C+ G++ ++  +L  ++ +G  PD  TY TLI+      N+ EAF+  DE
Sbjct: 718 IVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDE 777

Query: 476 MLQRGFVPD 484
           ML++G +P+
Sbjct: 778 MLEKGLIPN 786



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 257/516 (49%), Gaps = 35/516 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C+  +++ A     EM + G+  + V  NTLI  YC+ G + EA ++   M    
Sbjct: 338 LVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWN 397

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  ++YN+L++G C++G+  +A  + +EML  G++P   TYNT++       +  +A 
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++  M  RGV P+ +S  T++  F + G  DRA+M ++E+   G     V +  +I+G 
Sbjct: 458 HLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGL 517

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA  + D M E G   D +TY T+ +G C+   + EA  +   M  + +    
Sbjct: 518 CKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASI 577

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + +LI G  K   +N   +L   M  + + P++VTY TLI G+C   +++KA  L+ +
Sbjct: 578 EMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFE 637

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC------------ 348
           MI R  +PN +    +++       ++EA  +  +M+   I      C            
Sbjct: 638 MIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLE 697

Query: 349 -----------------------NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
                                  N  I G C+SG   +A   LS ++S G  PD+ +Y T
Sbjct: 698 AQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCT 757

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+      N+D+AF L  +M  +GL+P++  YN ++ G C+ G +  ++ + +++ +KG
Sbjct: 758 LIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKG 817

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L P+  TY  LI  +    +L +A R  ++M + G 
Sbjct: 818 LVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 242/482 (50%), Gaps = 35/482 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  ++  A+     M    + PD  +YNTL++ YCREG + +AF L   M G G
Sbjct: 373 LIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDG 432

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN++I GL   G  D A  +   M++ G++P+  +  T+L    +  +   A 
Sbjct: 433 ITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAM 492

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ E+  RG     V+F+T+I    + G+L  A   F  MK  GL PD + Y  + +GY
Sbjct: 493 MLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGY 552

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG V EA +++  M  +     +  YN++++GL + + L +  DL  EM  RG+ P+ 
Sbjct: 553 CKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNV 612

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G C +  ++KA +L+  M ++   P++V  + ++    +   + +A  +   
Sbjct: 613 VTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDK 672

Query: 301 MI-----------------------SRKIS------------PNYISYGILINGYCSMGH 325
           M+                       ++KI+             N I Y I I+G C  G 
Sbjct: 673 MLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGK 732

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA  +   ++ +G  P   +  T+I     SG+  +A +   +M+ +G+ P+   YN 
Sbjct: 733 LDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNA 792

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LING  +  N+D+A  L  K+  +GLVP+ +TYN+++  +CR G +  +  +  +M E+G
Sbjct: 793 LINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEG 852

Query: 446 LN 447
           ++
Sbjct: 853 IS 854



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 211/413 (51%), Gaps = 36/413 (8%)

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
           +  ++ L+     +     A  +F EMSR G  P + S S L+G   + G+   A+M F 
Sbjct: 156 SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFD 215

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           ++   G+VPD  + +I++N +C+ G V  A+++ ++M+++G   +VVTYN ++NG     
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTY 278
                + +   M ERGV  +  T T L+ G+CK G M++A  L  ++   + +  D   Y
Sbjct: 276 DFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVY 335

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
             L+DG+C++G ME A ++  +M+   +  N +    LI GYC +G V EA R++  MV 
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
             +KP   S NT++ GYCR G  SKA     +M+ +G+ P  ++YNT+I G V   + D 
Sbjct: 396 WNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDD 455

Query: 399 AFALVSKMENQGLVPDVIT-----------------------------------YNVILT 423
           A  L   M  +G+ P+ I+                                   +N +++
Sbjct: 456 ALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMIS 515

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           G C+ G++ ++  +  RM E GL+PD  TY TL +G+    N++EAF+    M
Sbjct: 516 GLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVM 568



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 195/350 (55%), Gaps = 8/350 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K+  A      M++ G+ PD +TY TL + YC+ G ++EAFQ+   M  + 
Sbjct: 513 MISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQA 572

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   +  YNSLI+GL K  + +   ++L EM   GLSP+  TY TL+   C ++ + +A 
Sbjct: 573 MSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAF 632

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM  RG  P++V  S ++    R+ ++  A +   +M    ++    ++    +  
Sbjct: 633 HLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA---VHNKCSDKL 689

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDV----VTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
            +N   LEA K+ D  L+K  + +     + YN  ++GLC++  L EA  + + ++ RG 
Sbjct: 690 VKNDLTLEAQKIADS-LDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGF 748

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD +T+ TLIH     GN+++A  L D M +K + P+I  YN LI+G CK+G +++A +
Sbjct: 749 LPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQR 808

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           L+  +  + + PN ++Y ILI  YC +G + +A RL  +M  +GI   ++
Sbjct: 809 LFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 186/346 (53%), Gaps = 3/346 (0%)

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           F  L+  F+  G    AL  F EM   G VP     + ++    + G    A+ + D+++
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G V DV   + ++N  C+   +  A ++  +M++ G+ P+  T+  L++G+   G+  
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFE 278

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISYGIL 316
               +  +M+++ +  ++VT   L+ G+CK G+M++A KL  ++   + +  +   YG+L
Sbjct: 279 GVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVL 338

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ++GYC MG + +A R+  EM+  G+K  +V CNT+IKGYC+ G   +A+     MV   +
Sbjct: 339 VDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNL 398

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD  SYNTL++G+ RE  + KAF L  +M   G+ P V+TYN ++ G    G  +D  L
Sbjct: 399 KPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGS-YDDAL 457

Query: 437 ILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            LW  M+E+G+ P+  +  T+++      +   A     E+L RGF
Sbjct: 458 HLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGF 503



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 137/278 (49%), Gaps = 18/278 (6%)

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           ++Y+ +L+ L  A++  EA  +  ++++     ++  +    H             +F +
Sbjct: 102 LSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNH-------------VFSV 148

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
             +      +  ++ L+  F + G  + A  ++ +M      P   S   L+      G 
Sbjct: 149 YKEFGFCSGV--FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGE 206

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              A  ++ ++VG GI P +  C+ ++  +C+ G    A E L KMV EG++P+ ++YN 
Sbjct: 207 GRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNG 266

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+NG+V   + +    ++  M  +G+  +V+T  +++ G+C++G+M ++E +L R +E+ 
Sbjct: 267 LVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLL-REVEED 325

Query: 446 --LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
             L  D   Y  L++G+     +++A R  DEML+ G 
Sbjct: 326 ELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGL 363


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 163/468 (34%), Positives = 258/468 (55%), Gaps = 8/468 (1%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREG----FLEEAFQLMNSMSGKGLKPGVFTYNSLINGL 75
           +++  GV  +T  YN L+     EG     LE A+     MS +G++P V T+N++I+ L
Sbjct: 151 QLDMFGVQANTEVYNHLLTVLA-EGSKIKLLESAY---TEMSSQGIEPDVVTFNTVIDAL 206

Query: 76  CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           C+  +   A  +L+EM    ++PD  T+ TL+     + ++  A  +   MS  G +P  
Sbjct: 207 CRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTS 266

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           V+ + LI  + + G++  AL Y ++  + G  PD V ++  +NG C+NG V  ALK+   
Sbjct: 267 VTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGL 326

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           ML++GC  DV TY+T++N LC    L EA  + N+M++ G  PD  TF TLI   C +  
Sbjct: 327 MLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQ 386

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           + +AL+L   +T K + P++ T+N LI+  CKVG+   A +L+ +M S   +P+ ++Y I
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNI 446

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LI+  CS G + +A  L  EM   G   + V+ NTII G C+     +A+E   +M   G
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTG 506

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           +  ++I++NTLI+G    E +D A  LV +M ++GL P+ +TYN ILT +C+QG +  + 
Sbjct: 507 IGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAA 566

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            IL  M   G   D  TY TLING       + A +    M  +G  P
Sbjct: 567 DILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKP 614



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 243/485 (50%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC+  +  +A + L EM    V PD  T+ TL+  +  EG +E A +L   MS  G
Sbjct: 202 VIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMG 261

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T N LING CK GR   A   + + +  G  PD  T++T +   C+  ++  A 
Sbjct: 262 CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHAL 321

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + G  PD+ ++ST+I     NG+L+ A     +M  +G +PD   +  +I   
Sbjct: 322 KVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVAL 381

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EAL +  E+  KG   +V T+N ++N LC+      A  LF EM   G  PD 
Sbjct: 382 CTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDE 441

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   C  G + KAL+L   M         VTYNT+IDG CK   +E+A +++  
Sbjct: 442 VTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQ 501

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I  N I++  LI+G C+   + +A  L  +M+ +G++P  V+ N+I+  YC+ G+
Sbjct: 502 MDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGN 561

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            SKA + L  M + G + D ++Y TLING  +      A  L+  M  +G+ P    YN 
Sbjct: 562 ISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNP 621

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           ++    R     D+  +   M E G  PD  TY  +  G       +KEAF F  EM   
Sbjct: 622 VIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADN 681

Query: 480 GFVPD 484
           GF+P+
Sbjct: 682 GFIPE 686



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 248/484 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L +  KI   +    EM  +G+ PD VT+NT+I+A CR      A  ++  MS   
Sbjct: 167 LLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD 226

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ G  ++G  + A  +   M +MG SP + T N L+   C+   + +A 
Sbjct: 227 VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +    G  PD V+FST +    +NG +D AL     M   G  PD   Y+ +IN  
Sbjct: 287 GYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCL 346

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C NG + EA  + ++M++ GC+ D  T+NT++  LC    L EA DL  E+  +G+ P+ 
Sbjct: 347 CNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNV 406

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF  LI+  CK G+ + A+ LF+ M      PD VTYN LID  C  G++ KA  L  +
Sbjct: 407 YTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKE 466

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M       + ++Y  +I+G C    + EA  ++ +M   GI    ++ NT+I G C +  
Sbjct: 467 MEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAER 526

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E + +M+SEG+ P++++YN+++  + ++ N+ KA  ++  M   G   DV+TY  
Sbjct: 527 IDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYAT 586

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+  R   +  +L  M  KG+ P    Y  +I      NN ++A     EM + G
Sbjct: 587 LINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVG 646

Query: 481 FVPD 484
             PD
Sbjct: 647 GPPD 650



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/444 (31%), Positives = 243/444 (54%), Gaps = 5/444 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++  A  ++ +    G  PD VT++T +N  C+ G ++ A +++  M  +G
Sbjct: 272 LINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG 331

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V+TY+++IN LC  G  + AK ++++M+  G  PDT T+NTL+V  C +  + EA 
Sbjct: 332 CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEAL 391

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E++ +G++P++ +F+ LI    + G    A+  F EMKS+G  PD V Y I+I+  
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNL 451

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + +AL +  EM   GC    VTYNTI++GLC+ + + EA+++F++M   G+  + 
Sbjct: 452 CSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNA 511

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI G C    ++ A  L D M  + ++P+ VTYN+++  +CK G + KA  +   
Sbjct: 512 ITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQT 571

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +     + ++Y  LING C       A +L   M  KG+KPT  + N +I+   R  +
Sbjct: 572 MTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNN 631

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN-MDKAFALVSKMENQGLVPDVITYN 419
              A     +M   G  PD+ +Y  +  G  R    + +AF  + +M + G +P+  ++ 
Sbjct: 632 GRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFR 691

Query: 420 VILTGFCRQGRMHDSELILWRMIE 443
           ++  G    G M D    L R IE
Sbjct: 692 MLAEGLLNLG-MDD---YLIRAIE 711


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 273/487 (56%), Gaps = 4/487 (0%)

Query: 2   VNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +  LC   + D A  + L  M +    PD ++YNT+I + C +   +EA  ++  M+ +G
Sbjct: 166 LKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 225

Query: 61  LK--PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            +  P V ++N++I+G  K+G   +A  + +EM+Q G+ PD  TYN+++   C+   M +
Sbjct: 226 GRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDK 285

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           AE +  +M  +GV PD V+++ +I  +S +G    +   FR+M S GL+PD V ++  ++
Sbjct: 286 AEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMS 345

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
             C++G   +A ++   M  KG + D+V+Y+ +L+G        + ++LF+ M ++G+  
Sbjct: 346 SLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVS 405

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           + +    LI  H K G M++A+ +F  M  + ++P++VTY+TLI  FC++G +  A + +
Sbjct: 406 NCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKF 465

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI-KPTLVSCNTIIKGYCR 357
           + MIS  I PN   Y  LI+G+C  G + +A     EM+ KG+ +P +V  ++II   C 
Sbjct: 466 SQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCI 525

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G    A +  + ++  G  P  +++N+LI+G+     M+KAF ++  M + G+ PDV+T
Sbjct: 526 EGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 585

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            N +++G+C+ G++ D  ++   M+ K + P   TY  +++G +       A +   EM+
Sbjct: 586 NNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMI 645

Query: 478 QRGFVPD 484
             G   D
Sbjct: 646 DSGTAVD 652



 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 261/484 (53%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +D A+  L +M  KGV PD VTYN +I+ Y   G  +E+ ++   M+ KG
Sbjct: 273 IVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKG 332

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   T++S ++ LCK GR   A+E+   M   G  PD  +Y+ LL     +   ++  
Sbjct: 333 LIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMN 392

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+ +G+  +    + LI   ++ G +D A++ F EM+  G+ P+ V Y+ +I+ +
Sbjct: 393 NLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAF 452

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-PD 239
           CR G + +A++   +M+  G   +   Y+++++G C    L +A +  +EM+ +G+  P+
Sbjct: 453 CRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPN 512

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F+++IH  C +G +  A ++F+++     +P IVT+N+LIDG+C VG+MEKA  +  
Sbjct: 513 IVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 572

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+S  I P+ ++   L++GYC  G + +   L+ EM+ K +KPT V+ N ++ G  R+G
Sbjct: 573 AMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAG 632

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S A +   +M+  G   D  +Y  L+ G  R +  D+A  L  K+       D+   N
Sbjct: 633 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 692

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++    +  R  ++  +   +   GL P+ STY  +I   + + +++EA      M + 
Sbjct: 693 TMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKS 752

Query: 480 GFVP 483
           G  P
Sbjct: 753 GCAP 756



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 248/464 (53%), Gaps = 5/464 (1%)

Query: 26  VYPDTV-TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           V P TV TY  L++  CR    +     +  +   GLK G     + +  LC   R D A
Sbjct: 119 VAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEA 178

Query: 85  KEV-LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG--VAPDIVSFSTL 141
            +V L  M ++   PD  +YNT++   C      EA ++   M++ G   +PD+VSF+T+
Sbjct: 179 VDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 238

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F + G++ +A   F EM   G+VPD   Y  I++  C+   + +A  +  +M++KG 
Sbjct: 239 IHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGV 298

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             D VTYN I++G   +    E+  +F +M  +G+ PD  TF++ +   CK G    A  
Sbjct: 299 EPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEE 358

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +F  MT K   PDIV+Y+ L+ G+   G     N L+  M  + I  N     ILI+ + 
Sbjct: 359 IFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHA 418

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G + EA  ++ EM G+G++P +V+ +T+I  +CR G  + A E  S+M+S G++P++ 
Sbjct: 419 KRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTA 478

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGL-VPDVITYNVILTGFCRQGRMHDSELILWR 440
            Y++LI+GF    ++ KA   +S+M ++GL  P+++ ++ I+   C +GR+ D++ +   
Sbjct: 479 VYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNL 538

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +I  G  P   T+ +LI+G+     +++AF   D M+  G  PD
Sbjct: 539 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 582



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 206/372 (55%), Gaps = 1/372 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K   +D A +   EM+ +GV P+ VTY+TLI+A+CR G L +A +  + M   G
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKENMSEA 119
           ++P    Y+SLI+G C  G   +AKE + EM+  GL  P+   +++++   C +  + +A
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +++F  +   G  P IV+F++LI  +   G++++A      M S G+ PD V    +++G
Sbjct: 533 QDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSG 592

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC++G + + L +  EML K      VTYN +L+GL RA   + A  +F+EM++ G   D
Sbjct: 593 YCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVD 652

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+ G C++   ++A+ LF  +     K DI   NT+I+   KV   E+AN L+A
Sbjct: 653 IDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFA 712

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +YG++I      G V EA  ++  M   G  P+    N II+   + G
Sbjct: 713 AISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 772

Query: 360 DASKADEFLSKM 371
           D  KA  ++SK+
Sbjct: 773 DIVKAGYYMSKV 784



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 210/450 (46%), Gaps = 50/450 (11%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE-------EIFCEMSRRGVAPD 134
           D A  + DE+L+ G      + N  L    R  +             +F  + R    P 
Sbjct: 59  DDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPR 118

Query: 135 IV-----SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           +      ++  L+    R  + D    +   +  AGL    +  T  +   C      EA
Sbjct: 119 VAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEA 178

Query: 190 LK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG--VFPDFYTFTTL 246
           +  +   M E  CV D ++YNT++  LC      EA D+   M + G    PD  +F T+
Sbjct: 179 VDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 238

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           IHG  K G ++KA NLF+ M QK + PD+ TYN+++D  CK   M+KA  +   M+ + +
Sbjct: 239 IHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGV 298

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ ++Y  +I+GY   GH  E+ +++ +M  KG+ P  V+ ++ +   C+ G +  A+E
Sbjct: 299 EPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEE 358

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREEN------------------------------- 395
               M ++G  PD +SY+ L++G+  E                                 
Sbjct: 359 IFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHA 418

Query: 396 ----MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
               MD+A  + ++M+ QG+ P+V+TY+ +++ FCR GR+ D+     +MI  G+ P+ +
Sbjct: 419 KRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTA 478

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            Y +LI+G     +L +A  F  EM+ +G 
Sbjct: 479 VYHSLIHGFCMHGDLVKAKEFISEMMSKGL 508



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 169/333 (50%), Gaps = 1/333 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY-PDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++  C    +  AK F+ EM  KG++ P+ V ++++I++ C EG + +A  + N +   
Sbjct: 483 LIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHI 542

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P + T+NSLI+G C  G+ ++A  VLD M+ +G+ PD  T NTL+   C+   + + 
Sbjct: 543 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDG 602

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM  + V P  V+++ ++    R G+   A   F EM  +G   D   Y I++ G
Sbjct: 603 LILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 662

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CRN    EA+ +  ++    C  D+   NT++N L + +   EA+DLF  +   G+ P+
Sbjct: 663 LCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPN 722

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +I    K+G++ +A  +F  M +    P     N +I    + G++ KA    +
Sbjct: 723 VSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMS 782

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            +    IS    +  +L++ + S G   E  + 
Sbjct: 783 KVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 815


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 163/482 (33%), Positives = 267/482 (55%), Gaps = 1/482 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L K  K D +  F  +M   G+     TYN +I   C+EG +  A  L + M   GL P 
Sbjct: 227 LAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPD 286

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           + TYNSLI+G  K G  D +  + +EM  +G  PD  TYN L+   C+ E M +A     
Sbjct: 287 IVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLH 346

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM   G+ P++V++STLI    +   L +A+ +  +M+  GL P+   YT +I+  C+ G
Sbjct: 347 EMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAG 406

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
           ++ +ALK+ DEML+     +VVTY T+L+GLC+   + EA+DLF  M++ GV P+  T+T
Sbjct: 407 YLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYT 466

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            L+HGH K+  +  AL L   + +K IKPD++ Y T+I G C   ++E+   + ++M + 
Sbjct: 467 ALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKAC 526

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            I  N + Y I ++ Y   G   EA  L  EM   G++ T+V+   +I G C+ G   +A
Sbjct: 527 GIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEA 586

Query: 365 DEFLSKMVSEGVDPDSISYNT-LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
            ++ ++M    + P++++  T LI+G  +   ++ A  L  +M+++ +VPD I Y  ++ 
Sbjct: 587 IDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALID 646

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G  +     ++  I  RM E G+  D   YT+L+ G    N +++A  F +EM+ +G VP
Sbjct: 647 GNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVP 706

Query: 484 DD 485
           D+
Sbjct: 707 DE 708



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 245/458 (53%), Gaps = 1/458 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++ L + +   G LEEA Q  + M+   + P   + N+ +  L K G+ D + + 
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M+  G++    TYN ++   C++ +M  A+ +F +M + G+ PDIV++++LI  + +
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G LD +   F EMK  G  PD + Y  +IN +C+   + +A     EM   G   +VVT
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T+++ LC+  ML +A     +M   G+ P+ +T+T+LI  +CK G ++ AL L D M 
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEML 419

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q  +  ++VTY TL+DG CK G M +A  L+  MI   ++PN  +Y  L++G+     V 
Sbjct: 420 QVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVE 479

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  L  E+  K IKP L+   TII G C      + +  +S+M + G+  +S+ Y   +
Sbjct: 480 NALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRM 539

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           + + +     +A  L+ +M + G+   ++T+ V++ G C++G + ++     RM +  L 
Sbjct: 540 DAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQ 599

Query: 448 PDR-STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  +  T LI+G    N ++ A +  DEM  +  VPD
Sbjct: 600 PNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPD 637



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 251/486 (51%), Gaps = 3/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  +CK+  + +AK    +M+Q G+ PD VTYN+LI+ Y + G L+E+F L   M   G
Sbjct: 258 MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG 317

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN+LIN  CK  +  +A   L EM   GL P+  TY+TL+   C++  + +A 
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAI 377

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   +M R G++P+  ++++LI    + G L  AL    EM    +  + V YT +++G 
Sbjct: 378 KFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGL 437

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA  +   M++ G   ++ TY  +++G  + K +  A +L  E+ E+ + PD 
Sbjct: 438 CKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDL 497

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T+I G C    + +   +   M    I+ + V Y   +D + K G+  +A  L  +
Sbjct: 498 LLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQE 557

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS-CNTIIKGYCRSG 359
           M    +    +++ +LI+G C  G V EA   +  M    ++P  V+ C  +I G C++ 
Sbjct: 558 MCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNN 617

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A +   +M  + + PD I+Y  LI+G ++ ++  +A  + S+M   G+  D+  Y 
Sbjct: 618 YIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYT 677

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G  +   +  + + L  MI KG+ PD      L+  +    ++ EA   HDE+L++
Sbjct: 678 SLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737

Query: 480 GFVPDD 485
             VP D
Sbjct: 738 --VPLD 741



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 141/304 (46%), Gaps = 35/304 (11%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV     ++ + +      ML EA   F+ M    VFP   +    ++   K G  + + 
Sbjct: 178 CVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSN 237

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             F  M    I   + TYN +I   CK G+M  A  L+  M    ++P+ ++Y  LI+GY
Sbjct: 238 KFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGY 297

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G + E+F L+ EM   G +P +++ N +I  +C+     KA  FL +M + G+ P+ 
Sbjct: 298 GKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNV 357

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVP--------------------------- 413
           ++Y+TLI+   +E  + +A   +  M   GL P                           
Sbjct: 358 VTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADE 417

Query: 414 --------DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
                   +V+TY  +L G C++GRM ++E +   MI+ G+ P+  TYT L++GH+    
Sbjct: 418 MLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKR 477

Query: 466 LKEA 469
           ++ A
Sbjct: 478 VENA 481



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 138/287 (48%), Gaps = 19/287 (6%)

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVFPDFYTFTTLIHGHCKDGNMNK 258
           G  +   +Y  +++ L  A+M  +A+    E++  R + P F  F  L            
Sbjct: 124 GFCLTTESYCLLVHILFYARMYFDANFFLKELISSRRILPGFDVFEVLWS---------- 173

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
                   T+    P    ++ L   F ++G +E+A + ++ M   ++ P   S    + 
Sbjct: 174 --------TRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLY 225

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
                G    + + + +MVG GI  ++ + N +I   C+ GD   A     +M   G+ P
Sbjct: 226 RLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTP 285

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D ++YN+LI+G+ +   +D++F L  +M++ G  PDVITYN ++  FC+  +M  +   L
Sbjct: 286 DIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFL 345

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M   GL P+  TY+TLI+    ++ L++A +F  +M + G  P++
Sbjct: 346 HEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNE 392


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 269/482 (55%)

Query: 3   NALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK 62
           +A+ +  + +    F  ++E  G+  +  T N +IN +CR      A+ ++  +   G +
Sbjct: 96  SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P   T+N+LINGLC +G+  +A  ++D M++ G  PD  TYN+++   CR  + S A ++
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDM 215

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             +M  R V  D+ ++ST+I    R+G +D A+  F+EM++ G+    V Y  ++ G C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G   +   +  +M+ +  V +V+T+N +L+   +   L EA++L+ EM+ RG+ P+  T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           + TL+ G+C    +++A N+ D+M +    PDIVT+ +LI G+C V  ++   K++ ++ 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
            R +  N ++Y IL+ G+C  G +  A  L+ EMV  G+ P +++   ++ G C +G   
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           KA E    +    +D   + Y T+I G  +   ++ A+ L   +  +G+ P+V+TY V++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +G C++G + ++ ++L +M E G  P+  TY TLI  H+   +L  + +  +EM   GF 
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 483 PD 484
            D
Sbjct: 576 AD 577



 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 234/422 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + K+  A + +  M + G  PD VTYN+++N  CR G    AF ++  M  + 
Sbjct: 164 LINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  VFTY+++I+ LC+ G  D A  +  EM   G+     TYN+L+   C+    ++  
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + P++++F+ L+ +F + G+L  A   ++EM + G+ P+ + Y  +++GY
Sbjct: 284 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA  M D M+   C  D+VT+ +++ G C  K + +   +F  + +RG+  + 
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ L+ G C+ G +  A  LF  M    + PD++TY  L+DG C  G++EKA +++ D
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K+    + Y  +I G C  G V +A+ L+  +  KG+KP +++   +I G C+ G 
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A+  L KM  +G  P+  +YNTLI   +R+ ++  +  L+ +M++ G   D  +  +
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 583

Query: 421 IL 422
           ++
Sbjct: 584 VI 585



 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 262/462 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K   A   L ++ + G  PDT T+NTLIN  C EG + +A  L++ M   G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENG 188

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TYNS++NG+C+ G    A ++L +M +  +  D  TY+T++   CR   +  A 
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+   +V++++L+    + G+ +   +  ++M S  +VP+ + + ++++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA ++  EM+ +G   +++TYNT+++G C    L+EA+++ + M+     PD 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFT+LI G+C    ++  + +F  ++++ +  + VTY+ L+ GFC+ G+++ A +L+ +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++YGIL++G C  G + +A  ++ ++    +   +V   TII+G C+ G 
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      +  +GV P+ ++Y  +I+G  ++ ++ +A  L+ KME  G  P+  TYN 
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           ++    R G +  S  ++  M   G + D S+   +I+  +S
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 117/233 (50%), Gaps = 4/233 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   ++D        + ++G+  + VTY+ L+  +C+ G ++ A +L   M   G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY  L++GLC  G+ ++A E+ +++ +  +      Y T++   C+   + +A 
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +FC +  +GV P++++++ +I    + G L  A +  R+M+  G  P++  Y  +I  +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            R+G +  + K+ +EM   G   D  +   +++ L       E D  F +ML 
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG----ELDKSFLDMLS 602


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/471 (33%), Positives = 256/471 (54%), Gaps = 12/471 (2%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           + SA + L  + Q G+ P   + N ++   CR   L+EA QL   +  K       +YN 
Sbjct: 208 LPSAPLLL-RLRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELPEKN----TCSYNI 258

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+  LC  GR   A ++ DEM      PD  TY  ++   C    +  A ++  EM+ RG
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +  + V+++++I +    GQ+  A+    +M   G+V D  ++T +++G+CR G +  A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
              DEM ++G   D VTY  ++NGLCRA  L EA+ +  EM ++G+  D  T+T LI G+
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK G M +A  + + M QK + P++VTY  L DG CK G++  AN+L  +M S+ +  N 
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +Y  LING C  G++ +A R   +M   G+KP + +  TII   C+S +  +A   L +
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ +G+ P  ++YN L+NGF     ++    L+  M  + + P+  TYN ++  +C +  
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           M  +  I   M+ + + P+ +TY  LI GH    N+KEA  FH EM+++GF
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666



 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 263/482 (54%), Gaps = 3/482 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC   +I  A     EM      PD VTY  +++ YC    LE A +L++ M+ +G
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+     Y S+I  LC +G+   A  V+++M+  G+  D A + T++   CRK +++ A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F EM +RG+A D V+++ LI    R G+L  A    +EM+  GL  D V YT++I+GY
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + ++M++K    +VVTY  + +GLC+   +  A++L +EM  +G+  + 
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +LI+G CK GN+ +A+     M +  +KPD+ TY T+I   C+  E+++A+ L  +
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + I P  ++Y +L+NG+C  G V    RL   M+ K I P   + N+++K YC   +
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    M+S+ V P+  +YN LI G  +  NM +A    S+M  +G      +YN 
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++ +  ++  +  +M ++ L  +   Y   I+   +++NL+      DE+++  
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVT 735

Query: 481 FV 482
            V
Sbjct: 736 LV 737



 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 213/415 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC + ++  A   + +M   GV  D   + T+++ +CR+G L  A    + M  +G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L     TY +LINGLC+ G    A+ VL EM   GL  D  TY  L+   C+   M+EA 
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M ++ V P++V+++ L     + G +  A     EM S GL  +   Y  +ING 
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A++   +M E G   DV TY TI+  LC++K L  A  L  EML++G+ P  
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L++G C  G +     L + M +K+I P+  TYN+L+  +C    M+   +++  
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+++ PN  +Y ILI G+C   ++ EA     EM+ KG + T  S N +I+   +   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            ++A     KM  E +  +   YN  I+    E+N++   AL  ++    LV  +
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSI 740



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           GI P+  SCN ++   CR       DE + ++  E  + ++ SYN L+        +  A
Sbjct: 221 GISPSPESCNAVL---CRL----PLDEAV-QLFQELPEKNTCSYNILLKALCTAGRIKDA 272

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             L  +M +    PDV+TY +++ G+C    +  +  +L  M  +GL  +   YT++I  
Sbjct: 273 HQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              +  + +A R  ++M+  G V D A
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAA 356


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 157/471 (33%), Positives = 256/471 (54%), Gaps = 12/471 (2%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           + SA + L  + Q G+ P   + N ++   CR   L+EA QL   +  K       +YN 
Sbjct: 208 LPSAPLLL-RLRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELPEKN----TCSYNI 258

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+  LC  GR   A ++ DEM      PD  TY  ++   C    +  A ++  EM+ RG
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +  + V+++++I +    GQ+  A+    +M   G+V D  ++T +++G+CR G +  A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
              DEM ++G   D VTY  ++NGLCRA  L EA+ +  EM ++G+  D  T+T LI G+
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK G M +A  + + M QK + P++VTY  L DG CK G++  AN+L  +M S+ +  N 
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +Y  LING C  G++ +A R   +M   G+KP + +  TII   C+S +  +A   L +
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ +G+ P  ++YN L+NGF     ++    L+  M  + + P+  TYN ++  +C +  
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           M  +  I   M+ + + P+ +TY  LI GH    N+KEA  FH EM+++GF
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666



 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 262/482 (54%), Gaps = 3/482 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC   +I  A     EM      PD VTY  +++ YC    LE A +L++ M+ +G
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+     Y S+I  LC +G+   A  V+++M+  G+  D A + T++   CRK +++ A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F EM +RG+A D V+++ LI    R G+L  A    +EM+  GL  D V YT++I+GY
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + ++M++K    +VVTY  + +GLC+   +  A++L +EM  +G+  + 
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +LI+G CK GN+ +A+     M +  +KPD+ TY T+I   C+  E+++A+ L  +
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + I P  ++Y +L+NG+C  G V    RL   M+ K I P   + N+++K YC   +
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    M+S+ V P+  +YN LI G  +  NM +A    S+M  +G      +YN 
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++ +  ++  +  +M +  L  +   Y   I+   +++NL+      DE+++  
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVT 735

Query: 481 FV 482
            V
Sbjct: 736 LV 737



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 213/415 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC + ++  A   + +M   GV  D   + T+++ +CR+G L  A    + M  +G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L     TY +LINGLC+ G    A+ VL EM   GL  D  TY  L+   C+   M+EA 
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M ++ V P++V+++ L     + G +  A     EM S GL  +   Y  +ING 
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A++   +M E G   DV TY TI+  LC++K L  A  L  EML++G+ P  
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L++G C  G +     L + M +K+I P+  TYN+L+  +C    M+   +++  
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+++ PN  +Y ILI G+C   ++ EA     EM+ KG + T  S N +I+   +   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            ++A     KM  + +  +   YN  I+    E+N++   AL  ++    LV  +
Sbjct: 686 FTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSI 740



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           GI P+  SCN ++   CR       DE + ++  E  + ++ SYN L+        +  A
Sbjct: 221 GISPSPESCNAVL---CRL----PLDEAV-QLFQELPEKNTCSYNILLKALCTAGRIKDA 272

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             L  +M +    PDV+TY +++ G+C    +  +  +L  M  +GL  +   YT++I  
Sbjct: 273 HQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              +  + +A R  ++M+  G V D A
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAA 356


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 252/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   ++ +A     E  + G+ P  V Y  LI    + G  ++A++L   M+G+G
Sbjct: 303 LMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQG 362

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  F  + ++ GL    R   A  + +EM   GL PD  TYN L+   C+   + EA 
Sbjct: 363 LLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREAL 421

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M + GV P I ++++L+  + + G +D A+  + EM   G  P+ V Y  ++ GY
Sbjct: 422 NLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGY 481

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                   A  + DEM + G   +  TYN ++NG+C    + E D +    +  G  P  
Sbjct: 482 IAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTM 541

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I+G  K G M  A  ++  M +K + P+I+TY + IDG+C+ G  + A K+  D
Sbjct: 542 MTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLND 601

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R + P+ ++Y  LING+C  G+++ A +L   ++  G+ P  V  N++I GY     
Sbjct: 602 VRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNM 661

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +  +F   M+  G+  D+ +Y TLI+GF ++ N+  A  L S+M  +G +PD  T+  
Sbjct: 662 MKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTA 721

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  G CR G +  ++ +L  M    + P+   Y  LING++    L+EAFR HDEML  G
Sbjct: 722 LTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMG 781

Query: 481 FVPDD 485
             PDD
Sbjct: 782 IQPDD 786



 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 237/500 (47%), Gaps = 36/500 (7%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            M  +GV PD  +   L+    R    ++A  L   M G+G +   + +++L++   K+G
Sbjct: 147 HMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEG 206

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             + A  + DEM    + PD   Y   +   C+  +   A  +  EM   G      ++ 
Sbjct: 207 MHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYR 266

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T++ +  + G+++ AL    EM+ AG   D ++ T ++ GYC    V  AL +  E L+ 
Sbjct: 267 TMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKD 326

Query: 200 GCVMDVVTYNTILNG------------LCRA-----------------------KMLTEA 224
           G V   V Y  ++ G            LCR                        +   +A
Sbjct: 327 GIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDA 386

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             LF EM + G+ PD +T+  LIH HC+   + +ALNLFD M +  +KP I TYN+L+ G
Sbjct: 387 VCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMG 445

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           +CK G M++A KL+++M      PN ++Y  L+ GY +      A+ L  EM   G+   
Sbjct: 446 YCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN 505

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
             + N +I G C      + D  L   +SEG  P  ++YN++INGFV+   M  AF +  
Sbjct: 506 DYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQ 565

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M  +GL P++ITY   + G+CR G    +  +L  +  +GL PD   Y  LING   + 
Sbjct: 566 QMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEG 625

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
           N+  A +    +L+ G  P+
Sbjct: 626 NMSHALQLLVILLKDGLAPN 645



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 219/397 (55%), Gaps = 3/397 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+ HK+  A      M++ GV P   TYN+L+  YC++G ++EA +L + M  +G
Sbjct: 407 LIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEG 466

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY +L+ G   K   D A  +LDEM Q G+S +  TYN L+   C  + + E +
Sbjct: 467 FKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVD 526

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +       G  P +++++++I  F + G +  A   +++M+  GL P+ + YT  I+GY
Sbjct: 527 GMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGY 586

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G    ALKM +++  +G   D+V YN ++NG C+   ++ A  L   +L+ G+ P+ 
Sbjct: 587 CRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNT 646

Query: 241 YTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             + +LI G+ K+ NM K ++ F + M +  I  D  TY TLIDGF K G +  A +L++
Sbjct: 647 VVYNSLITGY-KNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYS 705

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+++   P+  ++  L +G C  G +  A +L  EM    ++P +   N +I GY R  
Sbjct: 706 EMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDC 765

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLIN-GFVREEN 395
              +A     +M++ G+ PD  +Y+ L++  F+  +N
Sbjct: 766 KLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLEADN 802



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 207/435 (47%), Gaps = 34/435 (7%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A +    M+  G+ PD  +   LL+ + R  +  +A  +F EM  RG   D   F  L+ 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
              + G  + A+  F EM  A + PD  +Y + I   C+ G    AL+M  EM E G   
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
              TY T+++ L +   + EA  + +EM + G   D    TTL+ G+C    +  ALNLF
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL-------------------------- 297
               +  I P  V Y  LI G  +VG  +KA +L                          
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 298 --WADMI------SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
             W D +      +    P+  +Y  LI+ +C    + EA  L+  M   G+KP++ + N
Sbjct: 381 RRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYN 440

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +++ GYC+ G   +A +  S+M  EG  P+ ++Y TL+ G++ +++ D A+AL+ +M+  
Sbjct: 441 SLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQN 500

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+  +  TYNV++ G C   R+ + + +L   + +G  P   TY ++ING V    +  A
Sbjct: 501 GVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSA 560

Query: 470 FRFHDEMLQRGFVPD 484
           F  + +M ++G  P+
Sbjct: 561 FTVYQQMREKGLPPN 575


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 152/419 (36%), Positives = 239/419 (57%), Gaps = 3/419 (0%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVL-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           FT N L+  L K  R  +A ++  DE+L      +  TYNTL+   C+  +M  A ++  
Sbjct: 70  FTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLA 129

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM  RG +PD+V+ S+++      G L RA+ YFRE  S    PD+VL+ I+++G C+  
Sbjct: 130 EMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKAN 187

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA +M +EM E+G V DVVTYN++++GLC++  + EA  L   M++R V P+  T+ 
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TLI+G+CK G    A  L + M Q    PD+VT+N+LI GFC+  +++KA ++   M   
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG 307

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
             +PN ++Y +LI+G C  G   EA  L  EM G+GI P +++ N++I  +CR+    +A
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQA 367

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            +  + MV  GV PD ISY TL    ++ E  D+AFAL+  M + G +P++ T+N ++ G
Sbjct: 368 FQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEG 427

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            C   R+ ++  +L  M   G +P  STY  L+ G      + +A      M+  G  P
Sbjct: 428 LCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQP 486



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 220/411 (53%), Gaps = 4/411 (0%)

Query: 22  EQKGVYPDT--VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E  G + DT  +TYNTLI  +C+ G +E AFQL+  M  +G  P V T++S++  LC  G
Sbjct: 95  ELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTG 154

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              RA +   E ++   +PD+  +N L+   C+   +SEA ++  EMS RG+ PD+V+++
Sbjct: 155 NLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYN 212

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           +LI    ++ +++ A      M    + P+ V Y  +I GYC+ G    A ++ + M++ 
Sbjct: 213 SLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQS 272

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   DVVT+N++++G C+   + +A ++ + M +    P+  T+  LI G C  G  N+A
Sbjct: 273 GTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEA 332

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             L   M  + I PDI+TYN+LI  FC+  ++E+A ++   M+ R + P+ ISY  L   
Sbjct: 333 CELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVA 392

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
                   EAF L   M   G  P L + N++++G C S    +A   L+ M   G DP 
Sbjct: 393 LLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPA 452

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           + +Y  L+ G  +   +D A  ++  M ++G+ P V +   I+    R+G+
Sbjct: 453 ASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGK 503



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 208/395 (52%), Gaps = 9/395 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC    +  A  +    E     PD+V +N L++  C+   L EA Q++  MS +G
Sbjct: 146 IVQALCNTGNLSRAMQYF--RESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERG 203

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYNSLI+GLCK  R + A+++L+ M++  + P+  TYNTL+   C+      A 
Sbjct: 204 IVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAH 263

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + G  PD+V+F++LI  F +  ++D+A      MK     P+ V Y ++I+G 
Sbjct: 264 QLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGL 323

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EA ++  EM  +G + D++TYN+++   CR   + +A  + N M+ERGV PD 
Sbjct: 324 CDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDG 383

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TL     K    ++A  L D M      P++ T+N+L++G C    +++A  L A 
Sbjct: 384 ISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAV 443

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P   +Y +L+ G C  G V +A  +   MV +GI+P + S  TI+    R G 
Sbjct: 444 MRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGK 503

Query: 361 ASKADEFLSKMV---SEGVDPDSISYNTLINGFVR 392
              A  +  ++V   S+  DP   SY  L+  FV+
Sbjct: 504 QDLALHYFDQVVAAESKACDP---SYQKLLE-FVK 534



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 205/400 (51%), Gaps = 2/400 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK   ++ A   L EM+++G  PD VT+++++ A C  G L  A Q         
Sbjct: 111 LIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVE 168

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    +N L++GLCK  +   A+++++EM + G+ PD  TYN+L+   C+   M EA 
Sbjct: 169 CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEAR 228

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M +R V P++V+++TLI  + + G    A      M  +G  PD V +  +I+G+
Sbjct: 229 QLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGF 288

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A ++   M +  C  ++VTYN +++GLC A    EA +L +EM  RG+ PD 
Sbjct: 289 CQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDI 348

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI   C++  + +A  + ++M ++ + PD ++Y TL     K    ++A  L  +
Sbjct: 349 ITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDN 408

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  ++  L+ G C    + EA  L   M   G  P   +   ++ G C++G 
Sbjct: 409 MFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGR 468

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
              A E L  MVSEG+ P   S  T+++   RE   D A 
Sbjct: 469 VDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLAL 508



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 178/316 (56%), Gaps = 2/316 (0%)

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           +++ Y  +I G+C+ G +  A ++  EM E+G   DVVT+++I+  LC    L+ A   F
Sbjct: 104 NHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF 163

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            E +E    PD   F  L+HG CK   +++A  + + M+++ I PD+VTYN+LIDG CK 
Sbjct: 164 RESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKS 221

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
             ME+A +L   M+ RK+ PN ++Y  LI GYC  G    A +L   M+  G  P +V+ 
Sbjct: 222 YRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N++I G+C+     KA E L  M      P+ ++YN LI+G       ++A  L+S+M+ 
Sbjct: 282 NSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDG 341

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G++PD+ITYN ++  FCR  ++  +  I   M+E+G+ PD  +Y TL    +      E
Sbjct: 342 RGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDE 401

Query: 469 AFRFHDEMLQRGFVPD 484
           AF   D M   G +P+
Sbjct: 402 AFALLDNMFDAGAIPN 417



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 151/295 (51%), Gaps = 1/295 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK      A   +  M Q G +PD VT+N+LI+ +C++  +++A ++++ M    
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN LI+GLC  GR + A E+L EM   G+ PD  TYN+L+   CR   + +A 
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M  RGV PD +S+ TL     ++ + D A      M  AG +P+   +  ++ G 
Sbjct: 369 QIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGL 428

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA  +   M   GC     TY  ++ GLC+A  + +A ++   M+  G+ P  
Sbjct: 429 CCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLV 488

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
            +  T++H   ++G  + AL+ FD +     K    +Y  L++ F KV    K+N
Sbjct: 489 SSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLE-FVKVLREGKSN 542


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 253/472 (53%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D+  +   ++   GV  DT  YN L+N       ++    + N M+ +G++P V T N+L
Sbjct: 142 DAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTL 201

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I  LC+  +   A  +L+EM    ++PD  T+ TL+     + ++  A  +  +M   G 
Sbjct: 202 IKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGC 261

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
           +P  V+ + LI  + + G+++ AL Y ++  + G  PD V Y   ++  C+NG V  ALK
Sbjct: 262 SPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALK 321

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + D ML++G   DV TYNT++N L +   L EA  + N+M++RG  PD  TF TLI   C
Sbjct: 322 VMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALC 381

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
               + +AL+L   +T K + PD+ T+N LI+  CKVG+     +L+ +M S   +P+ +
Sbjct: 382 SQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEV 441

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y ILI+  CSMG +  A  L  EM   G   + V+ NTII   C+     +A+E   +M
Sbjct: 442 TYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQM 501

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            + G+   ++++NTLI+G  + + +D A  L+ +M  +GL P  ITYN ILT +C+QG +
Sbjct: 502 DAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDL 561

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             +  IL  M   G   D  TY TLING       + A +    M  +G  P
Sbjct: 562 KKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRP 613



 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 248/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+ H++ +A + L EM    V PD  T+ TL+  +  EG +E A ++   M   G
Sbjct: 201 LIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETG 260

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T N LING CK GR + A   + + +  G  PD  TYNT +   C+  ++S A 
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHAL 320

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + G  PD+ +++T+I   S+NG+LD A     +M   G +PD   +  +I   
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EAL +  E+  KG   DV T+N ++N LC+         LF EM   G  PD 
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   C  G +  AL+L   M         VTYNT+ID  CK   +E+A +++  
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  IS + +++  LI+G C    + +A  L  +MV +G++P+ ++ N+I+  YC+ GD
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGD 560

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA + L  M + G + D ++Y TLING  +      A  L+  M  +G+ P    YN 
Sbjct: 561 LKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 620

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           ++    R+  + D+  +   M E G  PD  TY  +  G       +KEAF F  EM+ +
Sbjct: 621 VIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNK 680

Query: 480 GFVPD 484
           GF+P+
Sbjct: 681 GFMPE 685



 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 142/430 (33%), Positives = 239/430 (55%), Gaps = 1/430 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +++ A  ++ +    G  PD VTYNT ++  C+ G +  A ++M+ M  +G
Sbjct: 271 LINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEG 330

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTYN++IN L K G  D AK ++++M+  G  PDT T+NTL+V  C +  + EA 
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEAL 390

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E++ +G++PD+ +F+ LI    + G     +  F EMKS+G  PD V Y I+I+  
Sbjct: 391 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHL 450

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G ++ AL +  EM   GC    VTYNTI++ LC+   + EA+++F++M   G+    
Sbjct: 451 CSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSA 510

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI G CK   ++ A  L + M ++ ++P  +TYN+++  +CK G+++KA  +   
Sbjct: 511 VTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILET 570

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +     + ++YG LING C  G    A +L   M  KGI+PT  + N +I+   R  +
Sbjct: 571 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNN 630

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN-MDKAFALVSKMENQGLVPDVITYN 419
              A     +M   G  PD+++Y  +  G  R    + +AF  + +M N+G +P+  ++ 
Sbjct: 631 LRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFR 690

Query: 420 VILTGFCRQG 429
           ++  G    G
Sbjct: 691 MLAEGLLNLG 700



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 249/484 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  ++   +    EM  +G+ PD VT NTLI A CR   +  A  ++  MS   
Sbjct: 166 LLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHA 225

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ G  ++G  + A  V  +M++ G SP   T N L+   C+   + +A 
Sbjct: 226 VAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDAL 285

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +    G  PD V+++T +    +NG +  AL     M   G  PD   Y  +IN  
Sbjct: 286 GYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 345

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG + EA  + ++M+++GC+ D  T+NT++  LC    L EA DL  E+  +G+ PD 
Sbjct: 346 SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDV 405

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF  LI+  CK G+ +  + LF+ M      PD VTYN LID  C +G++  A  L  +
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE 465

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S     + ++Y  +I+  C    + EA  ++ +M   GI  + V+ NT+I G C++  
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKR 525

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E + +MV EG+ P +I+YN+++  + ++ ++ KA  ++  M   G   DV+TY  
Sbjct: 526 IDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGT 585

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ GR   +  +L  M  KG+ P    Y  +I     +NNL++A     EM + G
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645

Query: 481 FVPD 484
             PD
Sbjct: 646 EPPD 649



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 232/472 (49%), Gaps = 1/472 (0%)

Query: 15  KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLING 74
           +M    + ++   P    Y  +I      G  +    L+  M  +G + G     S +  
Sbjct: 74  QMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVES 133

Query: 75  LCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
             +  R D A +++   L   G+  DTA YN LL        M   E ++ EM+ RG+ P
Sbjct: 134 YARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQP 193

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D+V+ +TLI    R  Q+  A++   EM S  + PD   +T ++ G+   G +  AL+++
Sbjct: 194 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVK 253

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
            +M+E GC    VT N ++NG C+   + +A     + +  G  PD  T+ T +H  C++
Sbjct: 254 TKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQN 313

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G+++ AL + D+M Q+   PD+ TYNT+I+   K GE+++A  +   M+ R   P+  ++
Sbjct: 314 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 373

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             LI   CS   + EA  L  E+  KG+ P + + N +I   C+ GD         +M S
Sbjct: 374 NTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS 433

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G  PD ++YN LI+       +  A  L+ +ME+ G     +TYN I+   C+Q R+ +
Sbjct: 434 SGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEE 493

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +E +  +M   G++    T+ TLI+G      + +A    ++M++ G  P +
Sbjct: 494 AEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSN 545



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 147/271 (54%), Gaps = 1/271 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   K+ +A   L EME  G    TVTYNT+I+A C++  +EEA ++ + M   G
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHG 505

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     T+N+LI+GLCK  R D A E++++M++ GL P   TYN++L   C++ ++ +A 
Sbjct: 506 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAA 565

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M+  G   D+V++ TLI    + G+   AL   R M+  G+ P    Y  +I   
Sbjct: 566 DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 625

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGVFPD 239
            R   + +AL +  EM E G   D +TY  +  GLCR    + EA D   EM+ +G  P+
Sbjct: 626 FRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPE 685

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           F +F  L  G    G  +  ++  +++ +K+
Sbjct: 686 FSSFRMLAEGLLNLGMDDYLISAIELIIEKA 716


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 161/489 (32%), Positives = 261/489 (53%), Gaps = 6/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK---GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++ ALC+   +D+A   L  M  +      P+ ++Y TL+ A C +    +A  L+ SM 
Sbjct: 62  VLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQ 121

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             G++P V TY +LI GLC     D A E+L+EM + G+ P+   Y+ LL   C+     
Sbjct: 122 DCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWE 181

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
              ++F EMS RG+ PD+V ++ LI    R+G++ +A      M   GL P+ V Y ++I
Sbjct: 182 SVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLI 241

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML--ERG 235
           N  C+ G V EAL +R  M EKG   DVVTYNT++ GL     + EA  L  EM+  E  
Sbjct: 242 NSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETR 301

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           V PD  TF ++IHG CK G M +AL +  +M +   + ++V +N LI G  +V +++KA 
Sbjct: 302 VRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAM 361

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           +L  +M S  + P+  +Y ILING+C M  V  A     EM  +G++P  V    ++K  
Sbjct: 362 ELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAM 421

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C  G   +A +  ++M       D+ +Y+T+I+G  +      A   +  M ++GL+PD 
Sbjct: 422 CDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDA 480

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           +TY++ +  F + G +  +E +L +M   G  PD + + +LI G+ ++ + ++      E
Sbjct: 481 VTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTRE 540

Query: 476 MLQRGFVPD 484
           M  +    D
Sbjct: 541 MTAKDVALD 549



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 252/493 (51%), Gaps = 48/493 (9%)

Query: 37  INAYCREGFLEEAFQLMNSMSGKGLKPGV---FTYNSLINGLCKKGRCDRAK---EVLDE 90
           +N + R   L E+  L++++      P V    +YN+++  LC++G  D A     V+  
Sbjct: 31  LNRHLRLLPLPESPALLSAL------PSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSH 84

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
             ++   P+  +Y TL+   C     ++A  +   M   GV PD+V++ TLI        
Sbjct: 85  EPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAAD 144

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D A+    EM  +G+ P+ V+Y+ +++GYC+ G      K+ +EM  +G   DVV Y  
Sbjct: 145 VDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTA 204

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +++ LCR   + +A  + + M ERG+ P+  T+  LI+  CK+G++ +AL+L   M++K 
Sbjct: 205 LIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKG 264

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS--RKISPNYISYGILINGYCSMGHVTE 328
           ++PD+VTYNTLI G   V EM++A  L  +M+    ++ P+ +++  +I+G C +G + +
Sbjct: 265 VQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQ 324

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A ++   M   G +  LV+ N +I G  R     KA E + +M S G+ PDS +Y+ LIN
Sbjct: 325 ALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILIN 384

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS-------------- 434
           GF +   +++A + +S+M +QG+ P+ + Y  +L   C QG M  +              
Sbjct: 385 GFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLD 444

Query: 435 --------------------ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
                               E  L  MI++GL PD  TY+  IN      +L  A R   
Sbjct: 445 AAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLK 504

Query: 475 EMLQRGFVPDDAF 487
           +M   GFVPD A 
Sbjct: 505 QMTASGFVPDVAV 517



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 237/469 (50%), Gaps = 40/469 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLI----------------------- 37
           ++ ALC D +   A   L  M+  GV PD VTY TLI                       
Sbjct: 100 LMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESG 159

Query: 38  ------------NAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                       + YC+ G  E   ++   MSG+G++P V  Y +LI+ LC+ G+  +A 
Sbjct: 160 IEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAA 219

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            V+D M + GL P+  TYN L+   C++ ++ EA ++   MS +GV PD+V+++TLI   
Sbjct: 220 RVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGL 279

Query: 146 SRNGQLDRALMYFREMKSA--GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
           S   ++D A+    EM      + PD + +  +I+G C+ G++ +AL++R  M E GC  
Sbjct: 280 SSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRC 339

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           ++V +N ++ GL R   + +A +L +EM   G+ PD +T++ LI+G CK   + +A +  
Sbjct: 340 NLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYL 399

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M  + ++P+ V Y  L+   C  G M +A  L+ +M  R    +  +Y  +I+G    
Sbjct: 400 SEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKS 458

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G    A     +M+ +G+ P  V+ +  I  + +SGD + A+  L +M + G  PD   +
Sbjct: 459 GEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVF 518

Query: 384 NTLINGFVREENMDKAFALVSKM--ENQGLVPDVITYNVILTGFCRQGR 430
           ++LI G+  + + +K   L  +M  ++  L P +I+  V   G   +G+
Sbjct: 519 DSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQ 567



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 206/392 (52%), Gaps = 7/392 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC+  K+  A   +  M ++G+ P+ VTYN LIN+ C+EG + EA  L  +MS KG
Sbjct: 205 LIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKG 264

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ--MGLSPDTATYNTLLVESCRKENMSE 118
           ++P V TYN+LI GL      D A  +L+EM+Q    + PD  T+N+++   C+   M +
Sbjct: 265 VQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQ 324

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A ++   M+  G   ++V+F+ LIG   R  ++ +A+    EM S+GL PD+  Y+I+IN
Sbjct: 325 ALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILIN 384

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+   V  A     EM  +G   + V Y  +L  +C   M+ +A DLFNEM +R    
Sbjct: 385 GFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKL 443

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   ++T+IHG  K G    A      M  + + PD VTY+  I+ F K G++  A ++ 
Sbjct: 444 DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVL 503

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK--GIKPTLVSCNTIIKGYC 356
             M +    P+   +  LI GY + G   +   L  EM  K   + P ++S  TI+    
Sbjct: 504 KQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIIS--TIVTSLG 561

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
            S +  K  + L    +E    D IS + ++N
Sbjct: 562 ASIEGQKLLQSLPGFDTEISKGDVISPHDVMN 593


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 258/483 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCKD  +  A+  + ++ +  + PDT TY ++I  +CR+  L+ A Q+ N M+ +G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TY++LINGLC  GR + A +++ EM+  G+ P   T    ++  C      +A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G  P++ +++ LI     +G L  A+  F  M   G+ P+ V Y  +IN  
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             N  +  A  + + M   GC  ++VTYN ++ G C      +A  + N ML+RG   + 
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I G+C  GN   AL + D+M     KPD  +Y  LI GFCK+ +ME A  L+ +
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN ++Y  LI+GYC    +  A  L   M   G +P + + N +I G  +  +
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A+E    M+ EG+ P+ ++Y  +I+G  +  +   A  + +KM  QG +P+++TY+ 
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++G++ ++E +   +   GL PD  TY  +I  ++    ++ AF F   M++ G
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700

Query: 481 FVP 483
             P
Sbjct: 701 CQP 703



 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 256/468 (54%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL  + Q G+      Y+ L+    R G         + M  +G++P +  YN++IN LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K G    A+ ++ ++ +  +SPDT TY ++++  CRK ++  A ++F +M++ G  P+ V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++STLI     +G+++ A    REM   G++P     T  I   C  G   +A ++  +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             KGC  +V TY  +++GLC + +L  A  LF+ M   GVFP+  T+  LI+   ++  +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
             A  + ++M +    P+IVTYN +I G+C +G+ +KA  +  +M+ R  S N ++Y  +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I GYC  G+ T A R+   M   G KP   S   +I G+C+      A    ++MV +G+
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+ ++Y  LI+G+ ++E +D A +L+  M+  G  P+V TYNV++ G  +Q     +E 
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   MIE+G+ P+  TYT +I+G     +   A    ++M+++G +P+
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634



 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 162/489 (33%), Positives = 251/489 (51%), Gaps = 8/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C+ H +DSA     +M ++G  P+TVTY+TLIN  C  G + EAF L+  M   G
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T    I  LC  G  + A  +  +M   G  P+  TY  L+   C    +  A 
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  MSR GV P+ V+++ LI I   N ++  A +    M   G  P+ V Y  +I GY
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A+ + + ML++G   ++VTYNTI+ G C +   T A  + + M + G  PD 
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++T LI G CK   M  A  LF+ M    + P+ VTY  LIDG+CK  +++ A  L   
Sbjct: 496 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y +LI+G     + + A  L   M+ +GI P +V+   +I G C++G 
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A E  +KM+ +G  P+ ++Y++LI    +E  +++A  L +++E  GL+PD ITY  
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR- 479
           ++  +   G++  +   L RMI+ G  P   TY  LI G      LK  +   D+ L   
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG------LKNEYLLADQRLAAL 729

Query: 480 -GFVPDDAF 487
              VP+ +F
Sbjct: 730 PDVVPNCSF 738



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 238/466 (51%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            M  +GV P+ + YN +INA C++G + +A  +M  +    + P  FTY S+I G C+K 
Sbjct: 205 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D A +V ++M + G  P+T TY+TL+   C    ++EA ++  EM   G+ P   + +
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
             I      G  + A   F +MK+ G  P+   YT +I+G C +G +  A+ +   M   
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 384

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   + VTYN ++N L   + +  A  + N M   G  P+  T+  +I G+C  G+  KA
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + + + M Q+    ++VTYNT+I G+C  G    A ++   M      P+  SY  LI G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C +  +  AF L+ EMV  G+ P  V+   +I GYC+      A   L  M   G  P+
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN LI+G  ++ N   A  L   M  +G+ P+V+TY  ++ G C+ G    +  +  
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +MIE+G  P+  TY++LI     +  ++EA     E+ + G +PD+
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 223/439 (50%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +      ++ +S  GL+ G+F Y++L+  L + G      +    ML  G+ P+   YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   C+  N+++AE I  ++    ++PD  +++++I    R   LD AL  F +M   G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+ V Y+ +ING C +G V EA  +  EM+  G +    T    +  LC      +A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            LF +M  +G  P+ YT+T LI G C  G +  A+ LF  M++  + P+ VTYN LI+  
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
            +   ++ A  +   M     SPN ++Y  +I GYC +G   +A  +   M+ +G    L
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ NTIIKGYC SG+ + A   L  M   G  PD  SY  LI GF +   M+ AF L ++
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M + GL P+ +TY  ++ G+C+  ++  +  +L  M   G  P+  TY  LI+G   QNN
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580

Query: 466 LKEAFRFHDEMLQRGFVPD 484
              A      M++ G  P+
Sbjct: 581 FSGAEELCKVMIEEGIFPN 599



 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 257/543 (47%), Gaps = 59/543 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC    +  A      M + GV+P+TVTYN LIN       ++ AF ++N M   G
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +I G C  G   +A  V++ MLQ G S +  TYNT++   C   N + A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   G  PD  S++ LI  F +  +++ A   F EM   GL P+ V YT +I+GY
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  +  A  + + M   GC  +V TYN +++GL +    + A++L   M+E G+FP+ 
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I G CK+G+ + AL +F+ M ++   P+++TY++LI    + G++E+A  L+A+
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFR-------------LW-YEMVGKGIK---- 342
           +    + P+ I+Y  +I  Y   G V  AF              LW Y ++ KG+K    
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720

Query: 343 ---------PTLV-SC-------------------------------NTIIKGYCRSGDA 361
                    P +V +C                               N ++     +G  
Sbjct: 721 LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 780

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A+E L  M+S+G+ PD  +YN+L+   +R  N+D A  +   M  QG    +  Y  +
Sbjct: 781 FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +   C+  R  ++ +    M+ +  NPD      LI+G +          F   M  R +
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 900

Query: 482 VPD 484
           +P 
Sbjct: 901 MPS 903



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 176/335 (52%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           + R + +   +  +GL      Y+ ++    R G     +     ML +G   +++ YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++N LC+   + +A+ +  ++ E  + PD +T+T++I GHC+  +++ AL +F+ M ++ 
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            +P+ VTY+TLI+G C  G + +A  L  +MI   I P   +    I   C MG   +A+
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           RL+ +M  KG +P + +   +I G C SG    A     +M  +GV P++++YN LIN  
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
           V    +  AF +++ M   G  P+++TYN ++ G+C  G    + L++  M+++G + + 
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            TY T+I G+    N   A R  D M   G  PD+
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 189/380 (49%), Gaps = 1/380 (0%)

Query: 107 LVESCR-KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L++SC  KE M+        +S+ G+   + ++S L+   SR G     +  +  M S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           + P+ ++Y  +IN  C++G V +A  +  ++ E     D  TY +++ G CR   L  A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            +FN+M + G  P+  T++TLI+G C  G +N+A +L   M    I P   T    I   
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C +G  E A +L+ DM ++   PN  +Y  LI+G C  G +  A  L++ M   G+ P  
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ N +I     +     A   L+ M   G  P+ ++YN +I G+    +  KA  +++ 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  +G   +++TYN I+ G+C  G    +  IL  M + G  PD  +YT LI G    + 
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
           ++ AF   +EM+  G  P++
Sbjct: 511 MESAFGLFNEMVDDGLCPNE 530



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 206/480 (42%), Gaps = 59/480 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C       A + +  M Q+G   + VTYNT+I  YC  G    A ++++ M   G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP  ++Y  LI G CK  + + A  + +EM+  GL P+  TY  L+   C+ E +  A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G  P++ +++ LI   ++      A    + M   G+ P+ V YT +I+G 
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG    AL+M ++M+E+GC+ +++TY++++  L +   + EA++LF E+   G+ PD 
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQ--------------KSIK-------------P 273
            T+  +I  +   G +  A N    M +              K +K             P
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730

Query: 274 DIV--------------------------------TYNTLIDGFCKVGEMEKANKLWADM 301
           D+V                                  N L+      G   +AN+L   M
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           IS+ + P+  +Y  L+     + +V  A  ++  M  +G +  L     +I   C+    
Sbjct: 791 ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 850

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A      M+    +PD +    LI+G +R+   D     +  ME +  +P    Y ++
Sbjct: 851 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 168/422 (39%), Gaps = 66/422 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CKD K+D+A   L  M++ G  P+  TYN LI+   ++     A +L   M  +G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY ++I+GLCK G    A E+ ++M++ G  P+  TY++L+    ++  + EAE
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655

Query: 121 EIFCE-----------------------------------MSRRGVAPDIVSFSTLI-GI 144
            +F E                                   M + G  P + ++  LI G+
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715

Query: 145 FSRNGQLDRALMYFREM------------------KSAGLVP-DNVLYTIIINGYCRN-- 183
            +     D+ L    ++                   SA L   D  L   + N    N  
Sbjct: 716 KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLS 775

Query: 184 --GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
             G   EA ++   M+ +G   D   YN++L  L R + +  A  +F  M  +G      
Sbjct: 776 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLN 835

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  LI   C+     +A   F+ M  ++  PD V    LIDG  + G  +   +    M
Sbjct: 836 GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            +R+  P++  Y IL              R W  + G   K    +C+T   G C     
Sbjct: 896 ETRRYMPSFHIYTIL-------AREASKKRSWKHVAGCITKVKRATCSTSCTGQCFCSSL 948

Query: 362 SK 363
           S+
Sbjct: 949 SR 950


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 260/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +D A+ FL +M  KGV P+  TYN LI  Y   G  +EA ++   M    
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T + L+  LCK G+   A++V D M   G +P+  +Y  +L     K  + +  
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMT 379

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   G+APDI +F+ LI  ++  G LD+A++ F EM+  G+ PD V Y  +I   
Sbjct: 380 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A++  ++M+++G   D   Y+ ++ G C    L +A +L +E++  G+  D 
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F+++I+  CK G +  A N+FD+     + P  V Y+ L+DG+C VG+MEKA +++  
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I PN + YG L+NGYC +G + E   L+ EM+ KGIKP+ +  N II G   +G 
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M   G+  +  +YN ++ G  +    D+A  L  ++    +  ++IT N 
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  +  R+ +++ +   +   GL P   TY+ +I   + +  ++EA      M   G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 481 FVPD 484
             PD
Sbjct: 740 CEPD 743



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 247/478 (51%), Gaps = 2/478 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY--PDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++ +LC   K   A   L  M + G    PD V Y+T+I+ + +EG + +A  L   M  
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQ 247

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G+ P   TY+S+++ LCK    D+A+  L +M+  G+ P+  TYN L+          E
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F EM R  + PD+V+ S L+G   + G++  A   F  M   G  P+   YTI++N
Sbjct: 308 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLN 367

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G +++   + D ML  G   D+ T+N ++       ML +A  +FNEM + GV P
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+ T+I   C+ G M+ A+  F+ M  + + PD   Y+ LI GFC  G + KA +L 
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 487

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           +++++  +  + + +  +IN  C +G V +A  ++   V  G+ PT V  + ++ GYC  
Sbjct: 488 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV 547

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA      MVS G++P+ + Y TL+NG+ +   +D+  +L  +M  +G+ P  I Y
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 607

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           N+I+ G    GR   +++    M E G+  ++ TY  ++ G        EA     E+
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKEL 665



 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 261/480 (54%), Gaps = 3/480 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ-LMNSMSGKGLKPGV 65
           + H+ + A  F  ++ + G+  + +  N L+  +C     +EA   L++     G  P V
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 182

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGL--SPDTATYNTLLVESCRKENMSEAEEIF 123
           F+Y+ L+  LC +G+  +A ++L  M + G   SPD   Y+T++    ++ ++++A ++F
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLF 242

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +RG+ PD V++S+++    +   +D+A  + R+M + G++P+N  Y  +I GY   
Sbjct: 243 KEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSST 302

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G   EA+++  EM     + DVVT + ++  LC+   + EA D+F+ M  +G  P+ +++
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSY 362

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           T +++G+   G +    +LFD+M    I PDI T+N LI  +   G ++KA  ++ +M  
Sbjct: 363 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 422

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             + P+ ++Y  +I   C +G + +A   + +M+ +G+ P   + + +I+G+C  G   K
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 482

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E +S++++ G+  D + ++++IN   +   +  A  +     N GL P  + Y++++ 
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+C  G+M  +  +   M+  G+ P+   Y TL+NG+     + E      EMLQ+G  P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 240/461 (52%), Gaps = 3/461 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P + TY  L++   R    E A      +   GL+  +   N L+ G C+  R D A ++
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 88  L-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV--APDIVSFSTLIGI 144
           L     ++G  PD  +Y+ LL   C +    +A+++   M+  G   +PD+V++ST+I  
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G +++A   F+EM   G+ PD V Y+ +++  C+   + +A     +M+ KG + +
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             TYN ++ G        EA  +F EM    + PD  T + L+   CK G + +A ++FD
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K   P++ +Y  +++G+   G +     L+  M+   I+P+  ++ +LI  Y + G
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A  ++ EM   G+KP +V+  T+I   CR G    A E  ++M+ +GV PD  +Y+
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI GF    ++ KA  L+S++ N G+  D++ ++ I+   C+ GR+ D++ I    +  
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           GL+P    Y+ L++G+     +++A R  D M+  G  P+D
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 225/468 (48%), Gaps = 19/468 (4%)

Query: 38  NAYCREGFL--EEAFQLMNSMSGKGLKPGVFTYNSLINGLCK---KGRCDRAKEVLDEML 92
            A  REG L  EEA  L++ +  +G        N  +  L +      C     +   + 
Sbjct: 35  TARVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALF 94

Query: 93  QMG---------LSPDTATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTLI 142
                       LSP + TY  +L++ C + +  E A   F ++ R G+  +I+  + L+
Sbjct: 95  NRAASRAQGPRVLSPTSHTY-AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLL 153

Query: 143 GIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG- 200
             F    + D AL +        G VPD   Y+I++   C  G   +A  +   M E G 
Sbjct: 154 KGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGA 213

Query: 201 -CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
            C  DVV Y+T+++G  +   + +A DLF EM++RG+ PDF T+++++H  CK   M+KA
Sbjct: 214 VCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKA 273

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
                 M  K + P+  TYN LI G+   G+ ++A +++ +M    I P+ ++  +L+  
Sbjct: 274 EAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGS 333

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G + EA  ++  M  KG  P + S   ++ GY   G      +    M+ +G+ PD
Sbjct: 334 LCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 393

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             ++N LI  +     +DKA  + ++M + G+ PDV+TY  ++   CR G+M D+     
Sbjct: 394 IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 453

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           +MI++G+ PD+  Y  LI G  +  +L +A     E++  G   D  F
Sbjct: 454 QMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 146/438 (33%), Positives = 246/438 (56%)

Query: 47  EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL 106
           E   +L+  M  KGLKP  +TYN +I  LCK G+   A+ VL EM+  G++PD   Y TL
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
           +   C+  N+S A  +F EM +R ++PD ++++ +I    + G++  A   F EM    L
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            PD V YT +I+GYC+ G + EA  + ++ML+ G   ++VTY  + +GLC+   +  A++
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L +EM  +G+  + YT+ +L++G CK GN+++A+ L   M      PD VTY TL+D +C
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K  EM +A++L   M+ R++ P  +++ +L+NG+C  G + +  +L   M+ KGI P   
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 504

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + N++IK YC   +     E    M ++GV PD  +YN LI G  +  NM +A+ L   M
Sbjct: 505 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 564

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
             +G    V +YN ++ GF ++ +  ++  +  +M  +GL  DR  Y    + +  +  +
Sbjct: 565 VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKM 624

Query: 467 KEAFRFHDEMLQRGFVPD 484
           +      DE +++  V D
Sbjct: 625 ELTLELCDEAIEKCLVGD 642



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 232/436 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM+ KG+ P+  TYN +I   C+ G + EA +++  M  +G+ P    Y +LI+G CK G
Sbjct: 213 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLG 272

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
               A  + DEM +  +SPD  TY  ++   C+   + EA+++F EM  + + PD V+++
Sbjct: 273 NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 332

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI  + + G++  A     +M   GL P+ V YT + +G C+ G V  A ++  EM  K
Sbjct: 333 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 392

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  +++ TYN+++NGLC+A  + +A  L  +M   G  PD  T+TTL+  +CK   M +A
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 452

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             L   M  + ++P +VT+N L++GFC  G +E   KL   M+ + I PN  +Y  LI  
Sbjct: 453 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 512

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           YC   ++     ++  M  KG+ P   + N +IKG+C++ +  +A      MV +G +  
Sbjct: 513 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 572

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             SYN LI GF + +   +A  L  +M  +GLV D   YN+       +G+M  +  +  
Sbjct: 573 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCD 632

Query: 440 RMIEKGLNPDRSTYTT 455
             IEK L  D  T  T
Sbjct: 633 EAIEKCLVGDIQTKNT 648



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 218/415 (52%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LCK  K+  A+  L EM  +G+ PD V Y TLI+ +C+ G +  A++L + M  + + P 
Sbjct: 233 LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 292

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
             TY ++I GLC+ GR   A ++  EM+   L PD  TY  L+   C++  M EA  +  
Sbjct: 293 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 352

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           +M + G+ P+IV+++ L     + G++D A     EM   GL  +   Y  ++NG C+ G
Sbjct: 353 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 412

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + +A+K+  +M   G   D VTY T+++  C+++ +  A +L  +ML+R + P   TF 
Sbjct: 413 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFN 472

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            L++G C  G +     L   M +K I P+  TYN+LI  +C    M    +++  M ++
Sbjct: 473 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 532

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + P+  +Y ILI G+C   ++ EA+ L  +MVGKG   T+ S N +IKG+ +     +A
Sbjct: 533 GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEA 592

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            E   +M  EG+  D   YN   +    E  M+    L  +   + LV D+ T N
Sbjct: 593 RELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 191/341 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   + SA     EM+++ + PD +TY  +I   C+ G + EA +L + M  K 
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P   TY +LI+G CK+G+   A  + ++MLQMGL+P+  TY  L    C+   +  A 
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R+G+  +I ++++L+    + G +D+A+   ++M+ AG  PD V YT +++ Y
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  ++ A ++  +ML++     VVT+N ++NG C + ML + + L   MLE+G+ P+ 
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI  +C   NM     ++  M  K + PD  TYN LI G CK   M++A  L  D
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           M+ +  +    SY  LI G+       EA  L+ +M  +G+
Sbjct: 564 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGL 604



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 30/296 (10%)

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
           RD  LE  C++              A++ T + DL    + R +  DF+    L      
Sbjct: 122 RDPSLEARCIV--------------AQIATASKDL---KMARKLIQDFWVNPNL------ 158

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLI-------DGFCKVGEMEKANKLWADMISRK 305
           D  ++ A  LFD M    +   + + N  I       DG     + E   KL  +M  + 
Sbjct: 159 DVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKG 218

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           + PN  +Y  +I   C  G V EA R+  EM+ +GI P  V   T+I G+C+ G+ S A 
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 278

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
               +M    + PD I+Y  +I G  +   + +A  L  +M  + L PD +TY  ++ G+
Sbjct: 279 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           C++G+M ++  +  +M++ GL P+  TYT L +G      +  A     EM ++G 
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 394



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 52/246 (21%)

Query: 282 IDGFCKVGEMEKANKLWADM-ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           ++  C V ++  A+K   D+ ++RK+  ++      +N    +G V+ A +L+ +M+  G
Sbjct: 126 LEARCIVAQIATASK---DLKMARKLIQDF-----WVNPNLDVG-VSFARKLFDKMLNYG 176

Query: 341 IKPTLVSCNTIIKGYCRSGDASK---ADEFLSKMVSE----GVDPDSISYNTLINGFVRE 393
           +  ++ SCN  I       D  K     E++ K++ E    G+ P+  +YN +I    + 
Sbjct: 177 LLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKT 236

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCR-------------------------- 427
             + +A  ++ +M ++G+ PD + Y  ++ GFC+                          
Sbjct: 237 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITY 296

Query: 428 ---------QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
                     GR+ +++ +   M+ K L PD  TYT LI+G+  +  +KEAF  H++MLQ
Sbjct: 297 TAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQ 356

Query: 479 RGFVPD 484
            G  P+
Sbjct: 357 MGLTPN 362


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/485 (31%), Positives = 271/485 (55%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQ-KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   C+  K++ A+  L EME+ +G+  D   Y  LI+ YCR   +++A +L + M   
Sbjct: 294 LIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNV 353

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL+  +F  N+LING CK G+   A+ +L  M+   L P++ +Y+TL+   CR+  +++A
Sbjct: 354 GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKA 413

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ EM R G+  ++V+ ++L+    R G  + AL  +  M   G+ PD V Y  +++ 
Sbjct: 414 ISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDL 473

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G    AL + +++L +G       +NT++NG C+ + + EA++ FN M E G  PD
Sbjct: 474 LFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPD 533

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G+CK GN+ +A  + + M +++I P I  YN+LI G  K  +  +   L +
Sbjct: 534 GVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLS 593

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  + +SPN ++YG LI G+C  G + +AF  +++M+ KG  P ++ C+ I+    R G
Sbjct: 594 EMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLG 653

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+  L KMV+  V  D   ++ L        +  K    + +      +P+ + YN
Sbjct: 654 RIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYN 713

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           + + G C+ G++ D++ I   ++ +G +PD  TY TLI+G+ +  N+ +AF   DEML+R
Sbjct: 714 IAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKR 773

Query: 480 GFVPD 484
           G  P+
Sbjct: 774 GLAPN 778



 Score =  280 bits (717), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 273/480 (56%), Gaps = 1/480 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C+   I +A      M + G  P   + N L+++  R+G    A  + + ++  G+ P V
Sbjct: 159 CEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDV 218

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
           FT + ++N  CK G  + A + + EM  +G   +  TYN+L+       +M  AE +   
Sbjct: 219 FTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKL 278

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIINGYCRNG 184
           M  RG+  + V+ + LI  + R  +L+ A    REM +S G+V D   Y ++I+GYCR  
Sbjct: 279 MGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVC 338

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + +A+++RDEML  G  M++   N ++NG C+   ++EA+ L   M++  + P+ Y+++
Sbjct: 339 KMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYS 398

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TL+ G C++G + KA+++++ M +  I+ ++VT+N+L+ G C+VG  E A  +W  M+ R
Sbjct: 399 TLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKR 458

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            ++P+ +SY  L++    MG    A  LW +++ +G   +  + NT+I G+C+     +A
Sbjct: 459 GVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEA 518

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           +E  ++M   G +PD ++Y TLI+G+ +  N+++AF +  KME + ++P +  YN ++ G
Sbjct: 519 EETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGG 578

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +  +  +   +L  M  KGL+P+  TY TLI G   +  L +AF  + +M+++GF P+
Sbjct: 579 LFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPN 638



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 258/478 (53%), Gaps = 4/478 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+    + A      M ++GV PD V+Y TL++   + G    A  L N +  +G
Sbjct: 435 LLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARG 494

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                + +N++ING CK  +   A+E  + M ++G  PD  TY TL+   C+  N+ EA 
Sbjct: 495 YGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAF 554

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M +  + P I  +++LIG   ++ +    +    EM   GL P+ V Y  +I G+
Sbjct: 555 KVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGW 614

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A     +M+EKG   +V+  + I++ L R   + EA+ L  +M+   VF D 
Sbjct: 615 CDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDH 674

Query: 241 YTFTTLIHGHCKDGNMN--KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
             F  L      DGN++  K  +  D  ++    P+ V YN  I G CK G+++ A K++
Sbjct: 675 GYFDRL--HKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIF 732

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           + ++ R  SP+  +Y  LI+GY + G+V +AF L  EM+ +G+ P +++ N +I G C+S
Sbjct: 733 SSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKS 792

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  +A +   K+  +G+ P+ ISYN LI+G+ +  N  +A  L +KM  +G+ P +ITY
Sbjct: 793 GNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITY 852

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           + ++ GFC+QG M  +  +L  M E   + + + +  L+ GHV    +K+  + H+ M
Sbjct: 853 SALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 265/521 (50%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNA CKD  ++ A  F+ EM+  G   + VTYN+LI+     G +E A  ++  M  +G
Sbjct: 224 MVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERG 283

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-GLSPDTATYNTLLVESCRKENMSEA 119
           +     T   LI G C++ + + A++VL EM +  G+  D   Y  L+   CR   M +A
Sbjct: 284 ILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDA 343

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM   G+  ++   + LI  + +NGQ+  A      M    L P++  Y+ +++G
Sbjct: 344 VRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDG 403

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR G V +A+ + +EML  G   +VVT+N++L GLCR     +A  +++ ML+RGV PD
Sbjct: 404 FCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPD 463

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++ TL+    K G   +AL L++ +  +        +NT+I+GFCK+ +M +A + + 
Sbjct: 464 EVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFN 523

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M      P+ ++Y  LI+GYC +G+V EAF++  +M  + I P++   N++I G  +S 
Sbjct: 524 RMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSK 583

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +  + LS+M  +G+ P+ ++Y TLI G+  E  +DKAF     M  +G  P+VI  +
Sbjct: 584 KTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICS 643

Query: 420 VILTGFCRQGRMHDSELILWRMI----------------------------------EKG 445
            I++   R GR+ ++ ++L +M+                                   K 
Sbjct: 644 KIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKS 703

Query: 446 LN-PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            + P+   Y   I G      + +A +    +L RGF PD+
Sbjct: 704 FSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDN 744



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 245/518 (47%), Gaps = 62/518 (11%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K + I S   F    +Q    P+  ++  L++   R    +E    +N +    + P   
Sbjct: 71  KFNPIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNEL----VTPSKN 126

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQM----GLSPDTATYNTLLVESCRKENMSEAEEI 122
            Y+SL+              V +E++++      SP    ++ +L   C K  +  A  +
Sbjct: 127 NYSSLV--------------VWNELVRVFEDFKFSP--TVFDMILKIYCEKGMIKNALHV 170

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           F  M + G  P + S + L+    R G+   A++ +  +   G+VPD    +I++N YC+
Sbjct: 171 FDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCK 230

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILN----------------------------- 213
           +G+V  A+    EM   G  ++VVTYN++++                             
Sbjct: 231 DGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVT 290

Query: 214 ------GLCRAKMLTEADDLFNEMLER--GVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                 G CR   L EA+ +  EM ER  G+  D Y +  LI G+C+   M+ A+ L D 
Sbjct: 291 LTLLIKGYCRQCKLEEAEKVLREM-ERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDE 349

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    ++ ++   N LI+G+CK G++ +A +L   M+   + P   SY  L++G+C  G 
Sbjct: 350 MLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGL 409

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           VT+A  ++ EM+  GI+  +V+ N+++KG CR G    A      M+  GV PD +SY T
Sbjct: 410 VTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCT 469

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++   +     +A AL + +  +G       +N ++ GFC+  +M ++E    RM E G
Sbjct: 470 LLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELG 529

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             PD  TY TLI+G+    N++EAF+  ++M +   +P
Sbjct: 530 FEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILP 567


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  288 bits (737), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 156/468 (33%), Positives = 264/468 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A C+  K D A   L  M++  + P T T N+L++   +   ++ A+ +   M    
Sbjct: 153 LLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMN 212

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  + T+N +IN LC++G+  +AK+ +  M   G+ P+  TYNT++   C +     A 
Sbjct: 213 IKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAAS 272

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M  + + PD  ++++ I    +  +++ A     ++  +GLVP+ V Y  +I+G 
Sbjct: 273 KIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGC 332

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A   RDEM+ +G V  V TYN +++ L   K + EA+D+  EM E+GV PD 
Sbjct: 333 CNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDV 392

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+   I+G+C+ GN  KAL+LFD M +K+I+P + TY +LID F K   M +A + +  
Sbjct: 393 VTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKK 452

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            I   + P+ I +  LI+G+C  G++  AF+L  EM    + P  V+ NT+++GYCR   
Sbjct: 453 SIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERK 512

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + L +M   G+ PD ISYNTLI+G+ +  +M  A  +  +M + G  P ++TYN 
Sbjct: 513 VEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNA 572

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           ++ G+ + G    +E +L  M  KG+ PD STY  +I    + ++L E
Sbjct: 573 LIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 251/457 (54%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           T+ ++ L++AYC+    +EA + +N M    + P   T NSL++ L K  +   A  V +
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           EM++M +     T+N ++   CR+    +A++    M   GV P++V+++T+I  +   G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           + + A   F+ MK   L PD   Y   I+  C+   + EA  +  ++LE G V + VTYN
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +++G C    L +A    +EM+ RG+    +T+  LIH    +  + +A ++   M +K
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            ++PD+VTYN  I+G+C+ G  +KA  L+ +M+ + I P   +Y  LI+ +     ++EA
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
              + + + +G+ P ++  N +I G+C +G+  +A + L +M +  V PD +++NTL+ G
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           + RE  +++A  L+ +M+ +G+ PD I+YN +++G+ ++G M D+  +   M+  G +P 
Sbjct: 507 YCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             TY  LI G+        A     EM  +G  PDD+
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDS 603



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 171/318 (53%)

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
           V   +++ ++++ YC+     EAL+  + M E   +    T N++L+ L +   +  A  
Sbjct: 144 VKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWF 203

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           ++ EM++  +     TF  +I+  C++G   KA +    M    +KP++VTYNT+I+G+C
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
             G+ E A+K++  M  + + P+  +Y   I+  C    + EA  +  +++  G+ P  V
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + N +I G C  GD  KA  +  +M++ G+     +YN LI+    E+ +++A  ++ +M
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
             +G+ PDV+TYN+ + G+CR G    +  +   M+EK + P   TYT+LI+    +N +
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443

Query: 467 KEAFRFHDEMLQRGFVPD 484
            EA     + ++ G +PD
Sbjct: 444 SEAEEKFKKSIKEGMLPD 461



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 129/261 (49%), Gaps = 35/261 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL  + +I+ A+  + EM +KGV PD VTYN  IN YCR G  ++A  L + M  K 
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422

Query: 61  LKPGVFTY-----------------------------------NSLINGLCKKGRCDRAK 85
           ++P V TY                                   N+LI+G C  G  DRA 
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF 482

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++L EM    + PD  T+NTL+   CR+  + EA+++  EM  RG+ PD +S++TLI  +
Sbjct: 483 QLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S+ G +  AL  F EM S G  P  + Y  +I GY + G    A ++  EM  KG   D 
Sbjct: 543 SKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD 602

Query: 206 VTYNTILNGLCRAKMLTEADD 226
            TY  ++  +     L E DD
Sbjct: 603 STYLYVIEAMKTNDDLVENDD 623


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  288 bits (737), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 255/457 (55%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +N +++++ +      A  L + +  KG++P + T N LIN  C  G+      V
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L+ G  P T T+ TL+   C K  +++A     ++  +G+  D VS+ TLI    +
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+   R++      P+  +Y  II+  C+   V EA  +  EM  KG   DVVT
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T++ G C A  L EA  L NEM+ + + P+ YT+  L+   CK+G + +A N+  +M 
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  +KPD++TY+TL+DG+  V E++KA  ++  M    ++P+  SY ILING+C    V 
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+ EM  K + P +V+ +++I G C+SG  S   + + +M   G+  + I+YN+LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLI 416

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  +  ++D+A AL +KM++QG+ P   T+ ++L G C+ GR+ D++     ++ KG +
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYH 476

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D   Y  +INGH  Q  L+EA     +M + G VP+
Sbjct: 477 LDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPN 513



 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 148/447 (33%), Positives = 252/447 (56%), Gaps = 2/447 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I      L ++ ++G  P T+T+ TLI   C +G + +A    + +  +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K    +Y +LING+CK G    A +++ ++      P+   YNT++   C+ + +SEA 
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ +G++ D+V+++TLI  F    +L  A+    EM    + P+   Y I+++  
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 181 CRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G V EA  +   ML K CV  DV+TY+T+++G      L +A  +FN M   GV PD
Sbjct: 280 CKEGKVKEAKNVLAVML-KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPD 338

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +++T LI+G CK+  +++ALNLF  M QK++ P IVTY++LIDG CK G +     L  
Sbjct: 339 VHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLID 398

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R I  N I+Y  LI+G C  GH+  A  L+ +M  +GI+P   +   ++ G C+ G
Sbjct: 399 EMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGG 458

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A E    ++++G   D   YN +ING  ++  +++A  ++SKME  G VP+ +T++
Sbjct: 459 RLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFD 518

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGL 446
           +I+    ++     +E +L +MI +GL
Sbjct: 519 IIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 250/463 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            +E KG+ PD +T N LIN +C  G +   F ++  +  +G +P   T+ +LI GLC KG
Sbjct: 84  RLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKG 143

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + ++A    D++L  G+  D  +Y TL+   C+  +   A ++  ++  R   P++  ++
Sbjct: 144 QVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYN 203

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    +   +  A   F EM + G+  D V YT +I G+C    + EA+ + +EM+ K
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK 263

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               +V TYN +++ LC+   + EA ++   ML+  V PD  T++TL+ G+     + KA
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKA 323

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            ++F+ M+   + PD+ +Y  LI+GFCK   +++A  L+ +M  + + P  ++Y  LI+G
Sbjct: 324 QHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G ++  + L  EM  +GI   +++ N++I G C++G   +A    +KM  +G+ P 
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPC 443

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           S ++  L++G  +   +  A      +  +G   DV  YNV++ G C+QG + ++  +L 
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLS 503

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +M E G  P+  T+  +IN    ++   +A +   +M+ RG +
Sbjct: 504 KMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 223/412 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +++ A  F  ++  +G+  D V+Y TLIN  C+ G    A +L+  + G+ 
Sbjct: 135 LIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRL 194

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V  YN++I+ LCK      A  +  EM   G+S D  TY TL+   C    + EA 
Sbjct: 195 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAI 254

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  + + P++ +++ L+    + G++  A      M  A + PD + Y+ +++GY
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGY 314

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                + +A  + + M   G   DV +Y  ++NG C+ KM+ EA +LF EM ++ + P  
Sbjct: 315 FLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LI G CK G ++   +L D M  + I  +++TYN+LIDG CK G +++A  L+  
Sbjct: 375 VTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNK 434

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I P   ++ IL++G C  G + +A   + +++ KG    +   N +I G+C+ G 
Sbjct: 435 MKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGL 494

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
             +A   LSKM   G  P++++++ +IN   +++  DKA  L+ +M  +GL+
Sbjct: 495 LEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 208/402 (51%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D A    + ML M  +P    +N +L    + ++ S A  +   +  +G+ PD+++ + L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F   GQ+        ++   G  P  + +T +I G C  G V +AL   D++L +G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             D V+Y T++NG+C+      A  L  ++  R   P+   + T+I   CK   +++A  
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           LF  MT K I  D+VTY TLI GFC   ++++A  L  +M+ + I+PN  +Y IL++  C
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G V EA  +   M+   +KP +++ +T++ GY    +  KA    + M   GV PD  
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           SY  LINGF + + +D+A  L  +M  + +VP ++TY+ ++ G C+ GR+     ++  M
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            ++G+  +  TY +LI+G     +L  A    ++M  +G  P
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRP 442



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 194/368 (52%), Gaps = 2/368 (0%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           +N+ +A   F  M      P I+ F+ ++  F++      A+     ++  G+ PD +  
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            I+IN +C  G +     +  ++L++G     +T+ T++ GLC    + +A    +++L 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           +G+  D  ++ TLI+G CK G+   A+ L   +  +  KP++  YNT+ID  CK   + +
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L+++M ++ IS + ++Y  LI G+C    + EA  L  EMV K I P + + N ++ 
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C+ G   +A   L+ M+   V PD I+Y+TL++G+     + KA  + + M   G+ P
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337

Query: 414 DVITYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           DV +Y +++ GFC+  +M D  L L++ M +K + P   TY++LI+G      +   +  
Sbjct: 338 DVHSYTILINGFCKN-KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 473 HDEMLQRG 480
            DEM  RG
Sbjct: 397 IDEMRDRG 404



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 171/333 (51%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D A+  F  M      P  + +  I++ + +      A+ +   +  KG   D++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++N  C    +T    +  ++L+RG  P   TFTTLI G C  G +NKAL+  D +  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           IK D V+Y TLI+G CK+G+   A KL   +  R   PN   Y  +I+  C    V+EA+
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L+ EM  KGI   +V+  T+I G+C +    +A   L++MV + ++P+  +YN L++  
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +E  + +A  +++ M    + PDVITY+ ++ G+     +  ++ +   M   G+ PD 
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDV 339

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +YT LING      + EA     EM Q+  VP
Sbjct: 340 HSYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 134/253 (52%), Gaps = 6/253 (2%)

Query: 238 PDFYTF---TTLIHGHCKD---GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           P+F +F   ++  H H +     N++ A++ F+ M      P I+ +N ++D F K+   
Sbjct: 16  PNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHY 75

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
             A  L   +  + I P+ I+  ILIN +C MG +T  F +  +++ +G +P  ++  T+
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTL 135

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           IKG C  G  +KA  F  K++++G+  D +SY TLING  +  +   A  LV K++ +  
Sbjct: 136 IKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLT 195

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            P+V  YN I+   C+   + ++  +   M  KG++ D  TYTTLI G    + LKEA  
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIG 255

Query: 472 FHDEMLQRGFVPD 484
             +EM+ +   P+
Sbjct: 256 LLNEMVLKTINPN 268


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  288 bits (737), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 156/517 (30%), Positives = 272/517 (52%), Gaps = 36/517 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGF--------------- 45
           +V+ LC   +   A +FL + + K   P  V++NT+++ YC+ G                
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 46  --------------------LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                               +EEA +L N M  +GL+P + TY  +  G    G    A+
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 86  EVLDEML-QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           E++ +ML   GL PD  TY  L+   C+  N+ EA  +  ++   G   +++ +S L+  
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             + GQ+D AL    EM++  L PD V Y+I+I+G C+ G V +A+++  EM       +
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
              ++ IL GLC   ML++A   F+ ++   + PD   +  +I G+ K G++ +A+ L+ 
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            +  K+I P IVT+N+LI GFCK  ++ +A +L   +    + P+ ++Y  L+N YC  G
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           ++ +   L  EM  K I+PT+V+   +IKG C+     ++ + L  M ++G+ PD I+YN
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           T+I  F + ++M KAF L+  M    L P   TYNV++ G CR G + D++ +L  + ++
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            +N  +  YTT+I  H  + + + A +   +M+++GF
Sbjct: 636 NINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGF 672



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 256/468 (54%), Gaps = 1/468 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +++  G      T + +++  C +    +A   +    GK   P V ++N++++  CK G
Sbjct: 140 DIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLG 199

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D AK     ML+ G+ PDT +YN L+       +M EA E+  +M ++G+ PD+V++ 
Sbjct: 200 LADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYK 259

Query: 140 TLIGIFSRNGQLDRALMYFREMKS-AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
            +   F   G +  A    ++M +  GL PD V YT++I G+C+ G + EAL++R ++L 
Sbjct: 260 IVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLS 319

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G  ++V+ Y+ +L+ LC+   + EA  L  EM    + PD  T++ LIHG CK G + +
Sbjct: 320 SGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQ 379

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+ L+  M    I P+   ++ ++ G C+ G +  A   +  +I   + P+   Y I+I+
Sbjct: 380 AIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMID 439

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           GY  +G V EA RL+  +  K I P++V+ N++I G+C++    +A   L  +   G++P
Sbjct: 440 GYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEP 499

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
            +++Y TL+N +  E N++K   L+ +M  + + P V+TY V++ G C+Q ++ +S  +L
Sbjct: 500 SAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLL 559

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             M  KGL PD+ TY T+I       ++++AF   D+ML     P  A
Sbjct: 560 EDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPA 607



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 248/464 (53%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           +  +G+ PD VTY  LI  +C+ G +EEA +L   +   G +  V  Y+ L++ LCK+G+
Sbjct: 282 LTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQ 341

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A ++L EM    L PD  TY+ L+   C++  + +A +++ EM    + P+  + S 
Sbjct: 342 VDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSG 401

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++      G L  A MYF  +  + L PD  LY I+I+GY + G V EA+++   + +K 
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
               +VT+N+++ G C+ + + EA  L   +   G+ P   T+TTL++ +C++GN+NK  
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLH 521

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L   M  K I+P +VTY  +I G CK  ++E++ +L  DM ++ ++P+ I+Y  +I  +
Sbjct: 522 ELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCF 581

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C    + +AF L  +M+   ++PT  + N +I G CR GD   AD  L  +    ++   
Sbjct: 582 CKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTK 641

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++Y T+I     + +  +A  +  +M  +G    +  Y+ ++   C++  +++++     
Sbjct: 642 VAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCI 701

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M+  G++PD+  +  ++N      ++   F     M++ G + D
Sbjct: 702 MLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 258/515 (50%), Gaps = 36/515 (6%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK    D AK F C M + G+ PDT +YN LI+     G +EEA +L N M  +GL+P +
Sbjct: 196 CKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDM 255

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
            TY  +  G    G    A+E++ +ML   GL PD  TY  L+   C+  N+ EA  +  
Sbjct: 256 VTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRR 315

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           ++   G   +++ +S L+    + GQ+D AL    EM++  L PD V Y+I+I+G C+ G
Sbjct: 316 DLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQG 375

Query: 185 FVLEALKMRDEML-------------------EKGCVMD----------------VVTYN 209
            V +A+++  EM                    EKG + D                V  YN
Sbjct: 376 KVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYN 435

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +++G  +   + EA  L+  + ++ + P   TF +LI+G CK+  + +A  L + +   
Sbjct: 436 IMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLH 495

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            ++P  VTY TL++ +C+ G + K ++L  +M  + I P  ++Y ++I G C    + E+
Sbjct: 496 GLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEES 555

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            +L  +M  KG+ P  ++ NTII+ +C++ D  KA E L  M+   ++P   +YN LI+G
Sbjct: 556 VQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDG 615

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             R  +++ A  ++  ++++ +    + Y  ++   C +G    +  +  +M+EKG    
Sbjct: 616 LCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVS 675

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              Y+ +IN    +  + EA  +   ML  G  PD
Sbjct: 676 IKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPD 710



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 223/414 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCK  ++D A   L EME   + PD VTY+ LI+  C++G +++A QL   M    
Sbjct: 332 LLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR 391

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  F ++ ++ GLC+KG    A+   D ++   L PD   YN ++    +  ++ EA 
Sbjct: 392 IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAV 451

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++  +  + + P IV+F++LI  F +N ++  A      +K  GL P  V YT ++N Y
Sbjct: 452 RLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAY 511

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +  ++  EM  K     VVTY  ++ GLC+ + L E+  L  +M  +G+ PD 
Sbjct: 512 CEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQ 571

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I   CK  +M KA  L D M   +++P   TYN LIDG C+ G++E A+++   
Sbjct: 572 ITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVS 631

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R I+   ++Y  +I  +C  G    A +++++MV KG + ++   + +I   C+   
Sbjct: 632 LQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCL 691

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            ++A  +   M+S+GV PD   +  ++N F R  ++   F L++ M   GL+ D
Sbjct: 692 INEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 205/410 (50%), Gaps = 19/410 (4%)

Query: 75  LCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPD 134
           L +K R    + VLD+MLQ               E      + +A  +  +M  + + P 
Sbjct: 73  LARKRRFKDLRLVLDQMLQ---------------EEVASRMVHDALFVLVKMKEQNLRPS 117

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           I ++++L+         D     + ++K +G        +II++G C      +A+    
Sbjct: 118 IQTYNSLLYNLRHT---DIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLR 174

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           +   K     VV++NTI++  C+  +   A   F  ML+ G+ PD Y++  LIHG    G
Sbjct: 175 QNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAG 234

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISY 313
           +M +AL L + M ++ ++PD+VTY  +  GF  +G M  A ++   M++ + + P+ ++Y
Sbjct: 235 SMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTY 294

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
            +LI G+C MG++ EA RL  +++  G +  ++  + ++   C+ G   +A + L +M +
Sbjct: 295 TVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEA 354

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
             + PD ++Y+ LI+G  ++  + +A  L  +M    + P+   ++ IL G C +G + D
Sbjct: 355 NNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSD 414

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           + +    +I   L PD + Y  +I+G+V   +++EA R +  +  +   P
Sbjct: 415 ARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITP 464


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 255/457 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C   ++  A   L ++ + G  P+  T+NTLI   C EG + E   L + M G+G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G    A  +L  M Q    PD   Y +++   C+   +++A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G++P I ++++LI       +         EM ++ ++P+ V+++ +++  
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V+EA  + D M+++G   +VVTYN +++G C    + EA  +F+ M+ +G  PD 
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++TLI+G+CK   + KA+ LF+ M +K + P+ VTY+TL+ G C VG ++ A  L+ +
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++R   P+++SY IL++  C    + EA  L   + G  + P +     +I G CR+G+
Sbjct: 400 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 459

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ P+  +Y  +ING  ++  + +A  L  +M+ +G  P+  TYN+
Sbjct: 460 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 519

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           I  GF R         +L  M+ +G + D ST T L+
Sbjct: 520 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 556



 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 245/457 (53%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    +  L+ +  +         L + M   G+ P ++T N LIN  C   R   A  V
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  P+ AT+NTL+   C +  + E   +F +M   G  P++V++ TLI    +
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+   R M+     PD V+YT II+  C++  V +A  +  EM+ +G    + T
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN++++ LC          L NEM+   + P+   F+T++   CK+G + +A ++ D+M 
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ ++P++VTYN L+DG C   EM++A K++  M+ +  +P+ +SY  LINGYC +  + 
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EM  K + P  V+ +T++ G C  G    A     +MV+ G  PD +SY  L+
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +   +D+A AL+  +E   + PD+  Y +++ G CR G +  +  +   +  KGL+
Sbjct: 417 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 476

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TYT +ING   Q  L EA +   EM ++G+ P+
Sbjct: 477 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 513



 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 252/465 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ P+  T N LIN++C    L  AF ++  +   G +P + T+N+LI GLC +G
Sbjct: 84  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 143

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +      + D+M+  G  P+  TY TL+   C+  + S A  +   M +    PD+V ++
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 203

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           ++I    ++ Q+ +A   F EM   G+ P    Y  +I+  C          + +EM+  
Sbjct: 204 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 263

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + +VV ++T+++ LC+   + EA D+ + M++RGV P+  T+  L+ GHC    M++A
Sbjct: 264 KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEA 323

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD M  K   PD+V+Y+TLI+G+CK+  +EKA  L+ +M  +++ PN ++Y  L++G
Sbjct: 324 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 383

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + +A  L++EMV +G  P  VS   ++   C++    +A   L  +    +DPD
Sbjct: 384 LCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPD 443

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              Y  +I+G  R   ++ A  L S + ++GL P+V TY +++ G C+QG + ++  +  
Sbjct: 444 IQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFG 503

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M  KG +P+  TY  +  G +  N      +   EML RGF  D
Sbjct: 504 EMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD 548



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 205/372 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCKD ++  A     EM  +G+ P   TYN+LI+A C     +    L+N M    
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V  ++++++ LCK+G+   A +V+D M++ G+ P+  TYN L+   C +  M EA 
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 324

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M  +G APD+VS+STLI  + +  ++++A+  F EM    L+P+ V Y+ +++G 
Sbjct: 325 KVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGL 384

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A+ +  EM+ +G + D V+Y  +L+ LC+ + L EA  L   +    + PD 
Sbjct: 385 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 444

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I G C+ G +  A +LF  ++ K + P++ TY  +I+G C+ G + +A+KL+ +
Sbjct: 445 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 504

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +  SPN  +Y ++  G+          +L  EM+ +G    + +   +++     G 
Sbjct: 505 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL 564

Query: 361 ASKADEFLSKMV 372
                + LS+ +
Sbjct: 565 DQSVKQILSEFL 576



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 206/396 (52%), Gaps = 8/396 (2%)

Query: 94  MGLSPD--TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           + L P   ++++NT   +S     + +A   F  M      P I  F+ L+   ++    
Sbjct: 16  LSLPPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHY 75

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCVMDVVTY 208
              L    +M S G+ P+     I+IN +C   R GF    L    ++L+ G   ++ T+
Sbjct: 76  STVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLA---KILKLGHQPNIATF 132

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           NT++ GLC    + E   LF++M+  G  P+  T+ TLI+G CK G+ + A+ L   M Q
Sbjct: 133 NTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQ 192

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
            + +PD+V Y ++ID  CK  ++ +A  L+++MI + ISP+  +Y  LI+  C++     
Sbjct: 193 GNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKH 252

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
              L  EMV   I P +V  +T++   C+ G   +A + +  M+  GV+P+ ++YN L++
Sbjct: 253 VTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD 312

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G      MD+A  +   M  +G  PDV++Y+ ++ G+C+  R+  +  +   M  K L P
Sbjct: 313 GHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIP 372

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  TY+TL++G      L++A     EM+ RG +PD
Sbjct: 373 NTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 408



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 116/233 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +I+ A     EM +K + P+TVTY+TL++  C  G L++A  L + M  +G
Sbjct: 345 LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 404

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   +Y  L++ LCK  R D A  +L  +    + PD   Y  ++   CR   +  A 
Sbjct: 405 QIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 464

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  +S +G+ P++ +++ +I    + G L  A   F EMK  G  P+   Y +I  G+
Sbjct: 465 DLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGF 524

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            RN   L  +++  EML +G   DV T   ++  L    +      + +E L+
Sbjct: 525 LRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 158/470 (33%), Positives = 260/470 (55%), Gaps = 8/470 (1%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
            ++++  K+ + D   M L EME +G    P+ VTYN +I    R+G LEEA +L+  M  
Sbjct: 1125 LLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRL 1184

Query: 59   KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
               K   FTYN LI GL  +G   +  ++  EM   G+ P   TYN + +    +  + E
Sbjct: 1185 SK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAM-IHGLLQSGLVE 1242

Query: 119  AEEI-FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A ++ F EM   G+ PD++++++L+  + + G L  AL+ F +++ AGL P  + Y I+I
Sbjct: 1243 AAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILI 1302

Query: 178  NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            +GYCR G + EA  +++EM E+GC+ +V TY  ++ G    + L  A + F+EML +G+ 
Sbjct: 1303 DGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQ 1362

Query: 238  PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            PD + + T I      G++ +A  L +++  + I  D VTYN LI G CK G ++ A +L
Sbjct: 1363 PDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKEL 1422

Query: 298  WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
               M+S  + P+ I+Y  LI+ +C  G + EA +++  M+  G+ P+ V+   II  YCR
Sbjct: 1423 QMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCR 1482

Query: 358  SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
             G+   A  +  KM+ EGV+P+ I+YN LI+   R      A     +M  +GLV +  T
Sbjct: 1483 RGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYT 1542

Query: 418  YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI---NGHVSQN 464
            Y +++ G C+ G   D+    + M + G++PD  T+  L+   +GHV   
Sbjct: 1543 YTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGFDGHVHHT 1592



 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 151/467 (32%), Positives = 261/467 (55%), Gaps = 3/467 (0%)

Query: 20   EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS--GKGLKPGVFTYNSLINGLCK 77
            EM + G+ P  VTYNTL++++ +EG  ++   L+  M   G G  P   TYN +I GL +
Sbjct: 1109 EMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 1168

Query: 78   KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
            KG  + A E+++ M ++     + TYN L+     +  + +  ++  EM   G+ P +V+
Sbjct: 1169 KGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVT 1227

Query: 138  FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
            ++ +I    ++G ++ A + F EM++ GL+PD + Y  ++NGYC+ G + EAL +  ++ 
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 1287

Query: 198  EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
              G    V+TYN +++G CR   L EA  L  EM E+G  P+  T+T L+ G     ++ 
Sbjct: 1288 RAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLA 1347

Query: 258  KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
             A   FD M  K ++PD   YNT I     +G++ +A +L   ++   IS + ++Y ILI
Sbjct: 1348 MAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILI 1407

Query: 318  NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
            +G C  G++ +A  L  +MV  G++P  ++   +I  +C  G   +A +  + M+S+G+ 
Sbjct: 1408 HGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL 1467

Query: 378  PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
            P ++++  +I+ + R  N+  A+    KM  +G+ P+ ITYNV++   CR GR   +   
Sbjct: 1468 PSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHH 1527

Query: 438  LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
               M+E+GL  ++ TYT LI+G+    N ++A RF+ EM Q G  PD
Sbjct: 1528 FHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPD 1574



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 206/372 (55%), Gaps = 2/372 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            M++ L +   +++A++   EM   G+ PD +TYN+L+N YC+ G L+EA  L   +   G
Sbjct: 1231 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            L P V TYN LI+G C+ G  + A+ + +EM + G  P+  TY  L+  S    +++ A 
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAR 1350

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            E F EM  +G+ PD  +++T I      G + RA      +   G+  D V Y I+I+G 
Sbjct: 1351 EFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGL 1410

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+ G + +A +++ +M+  G   D +TY  +++  C   +L EA  +FN M+  G+ P  
Sbjct: 1411 CKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSA 1470

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             TFT +IH +C+ GN+  A   F  M ++ ++P+ +TYN LI   C++G  + A+  + +
Sbjct: 1471 VTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHE 1530

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M+ R +  N  +Y +LI+G C +G+  +A R ++EM   GI P  ++   ++KG+   G 
Sbjct: 1531 MLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF--DGH 1588

Query: 361  ASKADEFLSKMV 372
                 E+L  ++
Sbjct: 1589 VHHTIEYLDNVI 1600



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 231/432 (53%), Gaps = 3/432 (0%)

Query: 56   MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
            M+  G+ P V   N ++  L    R D    V +EML++G+ P   TYNTLL    ++  
Sbjct: 1075 MASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGR 1134

Query: 116  MSEAEEIFCEMSRRGVA--PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
              +   +  EM  RG    P+ V+++ +I   +R G L+ A      M+ +     +  Y
Sbjct: 1135 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA-SSFTY 1193

Query: 174  TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
              +I G    G V +   ++ EM  +G +  VVTYN +++GL ++ ++  A   F EM  
Sbjct: 1194 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRA 1253

Query: 234  RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
             G+ PD  T+ +L++G+CK GN+ +AL LF  + +  + P ++TYN LIDG+C++G++E+
Sbjct: 1254 MGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEE 1313

Query: 294  ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
            A  L  +M  +   PN  +Y IL+ G  ++  +  A   + EM+ KG++P   + NT I 
Sbjct: 1314 ARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRIC 1373

Query: 354  GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
                 GD ++A E    ++ EG+  D+++YN LI+G  +  N+  A  L  KM + GL P
Sbjct: 1374 AELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQP 1433

Query: 414  DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
            D ITY  ++   C +G + ++  I   MI  GL P   T+T +I+ +  + NL  A+ + 
Sbjct: 1434 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 1493

Query: 474  DEMLQRGFVPDD 485
             +ML+ G  P++
Sbjct: 1494 RKMLEEGVEPNE 1505



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 190/413 (46%), Gaps = 75/413 (18%)

Query: 146  SRNGQLDRA----LMYFREMKSAGLVPD------------------------------NV 171
            +R+  LD      L  FREM S G+ PD                               +
Sbjct: 1056 ARDATLDTCSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGI 1115

Query: 172  LYTIIINGYCRNGFVLEALKMRDEMLEK-------GCVMDVVTYNTILNGLCRAKMLTEA 224
              +I+      + F+ E  K +  ML K       GC+ + VTYN ++ GL R   L EA
Sbjct: 1116 EPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEA 1175

Query: 225  DDLFN----------------------------------EMLERGVFPDFYTFTTLIHGH 250
             +L                                    EM   G+ P   T+  +IHG 
Sbjct: 1176 AELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGL 1235

Query: 251  CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
             + G +  A   F  M    + PD++TYN+L++G+CK G +++A  L+ D+    ++P  
Sbjct: 1236 LQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTV 1295

Query: 311  ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            ++Y ILI+GYC +G + EA  L  EM  +G  P + +   ++KG       + A EF  +
Sbjct: 1296 LTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDE 1355

Query: 371  MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
            M+S+G+ PD  +YNT I   +   ++ +AF L   +  +G+  D +TYN+++ G C+ G 
Sbjct: 1356 MLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGN 1415

Query: 431  MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            + D++ +  +M+  GL PD  TYT LI+ H  +  L+EA +  + M+  G +P
Sbjct: 1416 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 1468



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 14/138 (10%)

Query: 334  YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            Y    K    TL +C+T+    C S           +M S GV PD    N ++      
Sbjct: 1050 YSKECKARDATLDTCSTL----CLSA--------FREMASHGVAPDVKDCNRVLRVLRDA 1097

Query: 394  ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN--PDRS 451
               D   A+  +M   G+ P ++TYN +L  F ++GR     ++L  M  +G    P+  
Sbjct: 1098 ARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDV 1157

Query: 452  TYTTLINGHVSQNNLKEA 469
            TY  +I G   + +L+EA
Sbjct: 1158 TYNVVITGLTRKGDLEEA 1175


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 255/457 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C   ++  A   L ++ + G  P+  T+NTLI   C EG + E   L + M G+G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G    A  +L  M Q    PD   Y +++   C+   +++A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G++P I ++++LI       +         EM ++ ++P+ V+++ +++  
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V+EA  + D M+++G   +VVTYN +++G C    + EA  +F+ M+ +G  PD 
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +++TLI+G+CK   + KA+ LF+ M +K + P+ VTY+TL+ G C VG ++ A  L+ +
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 408

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++R   P+++SY IL++  C    + EA  L   + G  + P +     +I G CR+G+
Sbjct: 409 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ P+  +Y  +ING  ++  + +A  L  +M+ +G  P+  TYN+
Sbjct: 469 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 528

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           I  GF R         +L  M+ +G + D ST T L+
Sbjct: 529 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 565



 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 245/457 (53%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    +  L+ +  +         L + M   G+ P ++T N LIN  C   R   A  V
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  P+ AT+NTL+   C +  + E   +F +M   G  P++V++ TLI    +
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+   R M+     PD V+YT II+  C++  V +A  +  EM+ +G    + T
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN++++ LC          L NEM+   + P+   F+T++   CK+G + +A ++ D+M 
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ ++P++VTYN L+DG C   EM++A K++  M+ +  +P+ +SY  LINGYC +  + 
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EM  K + P  V+ +T++ G C  G    A     +MV+ G  PD +SY  L+
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +   +D+A AL+  +E   + PD+  Y +++ G CR G +  +  +   +  KGL+
Sbjct: 426 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 485

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TYT +ING   Q  L EA +   EM ++G+ P+
Sbjct: 486 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 522



 Score =  284 bits (726), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 252/465 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ P+  T N LIN++C    L  AF ++  +   G +P + T+N+LI GLC +G
Sbjct: 93  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 152

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +      + D+M+  G  P+  TY TL+   C+  + S A  +   M +    PD+V ++
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 212

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           ++I    ++ Q+ +A   F EM   G+ P    Y  +I+  C          + +EM+  
Sbjct: 213 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 272

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + +VV ++T+++ LC+   + EA D+ + M++RGV P+  T+  L+ GHC    M++A
Sbjct: 273 KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEA 332

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD M  K   PD+V+Y+TLI+G+CK+  +EKA  L+ +M  +++ PN ++Y  L++G
Sbjct: 333 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 392

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + +A  L++EMV +G  P  VS   ++   C++    +A   L  +    +DPD
Sbjct: 393 LCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPD 452

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              Y  +I+G  R   ++ A  L S + ++GL P+V TY +++ G C+QG + ++  +  
Sbjct: 453 IQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFG 512

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M  KG +P+  TY  +  G +  N      +   EML RGF  D
Sbjct: 513 EMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD 557



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 205/372 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCKD ++  A     EM  +G+ P   TYN+LI+A C     +    L+N M    
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V  ++++++ LCK+G+   A +V+D M++ G+ P+  TYN L+   C +  M EA 
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 333

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M  +G APD+VS+STLI  + +  ++++A+  F EM    L+P+ V Y+ +++G 
Sbjct: 334 KVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGL 393

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A+ +  EM+ +G + D V+Y  +L+ LC+ + L EA  L   +    + PD 
Sbjct: 394 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 453

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I G C+ G +  A +LF  ++ K + P++ TY  +I+G C+ G + +A+KL+ +
Sbjct: 454 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 513

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +  SPN  +Y ++  G+          +L  EM+ +G    + +   +++     G 
Sbjct: 514 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL 573

Query: 361 ASKADEFLSKMV 372
                + LS+ +
Sbjct: 574 DQSVKQILSEFL 585



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 206/396 (52%), Gaps = 8/396 (2%)

Query: 94  MGLSPD--TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           + L P   ++++NT   +S     + +A   F  M      P I  F+ L+   ++    
Sbjct: 25  LSLPPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHY 84

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCVMDVVTY 208
              L    +M S G+ P+     I+IN +C   R GF    L    ++L+ G   ++ T+
Sbjct: 85  STVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLA---KILKLGHQPNIATF 141

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           NT++ GLC    + E   LF++M+  G  P+  T+ TLI+G CK G+ + A+ L   M Q
Sbjct: 142 NTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQ 201

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
            + +PD+V Y ++ID  CK  ++ +A  L+++MI + ISP+  +Y  LI+  C++     
Sbjct: 202 GNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKH 261

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
              L  EMV   I P +V  +T++   C+ G   +A + +  M+  GV+P+ ++YN L++
Sbjct: 262 VTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD 321

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G      MD+A  +   M  +G  PDV++Y+ ++ G+C+  R+  +  +   M  K L P
Sbjct: 322 GHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIP 381

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  TY+TL++G      L++A     EM+ RG +PD
Sbjct: 382 NTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 417



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 116/233 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +I+ A     EM +K + P+TVTY+TL++  C  G L++A  L + M  +G
Sbjct: 354 LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 413

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   +Y  L++ LCK  R D A  +L  +    + PD   Y  ++   CR   +  A 
Sbjct: 414 QIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 473

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  +S +G+ P++ +++ +I    + G L  A   F EMK  G  P+   Y +I  G+
Sbjct: 474 DLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGF 533

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            RN   L  +++  EML +G   DV T   ++  L    +      + +E L+
Sbjct: 534 LRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 161/490 (32%), Positives = 267/490 (54%), Gaps = 8/490 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+   +  AK  +  ME  G   + V YN LI+  C++  + EA  +   ++GK 
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEA 119
           LKP V TY +L+ GLCK    +   E++DEML +  SP  A  ++L VE  RK   + EA
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL-VEGLRKRGKIEEA 351

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +   +   GV+P++  ++ LI    +  +   A + F  M   GL P++V Y+I+I+ 
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR G +  AL    EM++ G  + V  YN+++NG C+   ++ A+    EM+ + + P 
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T+L+ G+C  G +NKAL L+  MT K I P I T+ TL+ G  + G +  A KL+ 
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    + PN ++Y ++I GYC  G +++AF    EM  KGI P   S   +I G C +G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            AS+A  F+  +     + + I Y  L++GF RE  +++A ++  +M  +G+  D++ Y 
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651

Query: 420 VILTGFCRQGRMHDSEL---ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           V++ G  +     D +L   +L  M ++GL PD   YT++I+      + KEAF   D M
Sbjct: 652 VLIDGSLKH---KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708

Query: 477 LQRGFVPDDA 486
           +  G VP++ 
Sbjct: 709 INEGCVPNEV 718



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 161/521 (30%), Positives = 269/521 (51%), Gaps = 37/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCK  K   A++    M + G+ P+ VTY+ LI+ +CR G L+ A   +  M   G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK  V+ YNSLING CK G    A+  + EM+   L P   TY +L+   C K  +++A 
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+ +G+AP I +F+TL+    R G +  A+  F EM    + P+ V Y ++I GY
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A +   EM EKG V D  +Y  +++GLC     +EA    + + +     + 
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T L+HG C++G + +AL++   M Q+ +  D+V Y  LIDG  K  + +    L  +
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + P+ + Y  +I+     G   EAF +W  M+ +G  P  V+   +I G C++G 
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732

Query: 361 ASKADEFLSKM-----------------------------------VSEGVDPDSISYNT 385
            ++A+   SKM                                   + +G+  ++ +YN 
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW-RMIEK 444
           LI GF R+  +++A  L+++M   G+ PD ITY  ++   CR+  +  + + LW  M EK
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA-IELWNSMTEK 851

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G+ PDR  Y TLI+G      + +A    +EML++G +P++
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892



 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 251/469 (53%), Gaps = 8/469 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK   I +A+ F+ EM  K + P  VTY +L+  YC +G + +A +L + M+GKG
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P ++T+ +L++GL + G    A ++ +EM +  + P+  TYN ++   C + +MS+A 
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   EM+ +G+ PD  S+  LI      GQ   A ++   +       + + YT +++G+
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + EAL +  EM+++G  +D+V Y  +++G  + K       L  EM +RG+ PD 
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T++I    K G+  +A  ++D+M  +   P+ VTY  +I+G CK G + +A  L + 
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742

Query: 301 MISRKISPNYISYG----ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           M      PN ++YG    IL  G   M    E     +  + KG+     + N +I+G+C
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE----LHNAILKGLLANTATYNMLIRGFC 798

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           R G   +A E +++M+ +GV PD I+Y T+IN   R  ++ KA  L + M  +G+ PD +
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
            YN ++ G C  G M  +  +   M+ +GL P+  T  T  +   S  +
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSSKS 907



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 169/590 (28%), Positives = 279/590 (47%), Gaps = 107/590 (18%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR------------------ 42
           +++ LCK  K+  A     ++  K + PD VTY TL+   C+                  
Sbjct: 268 LIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR 327

Query: 43  -----------------EGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                             G +EEA  L+  +   G+ P +F YN+LI+ LCK  +   A+
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            + D M ++GL P+  TY+ L+   CR+  +  A     EM   G+   +  +++LI   
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G +  A  +  EM +  L P  V YT ++ GYC  G + +AL++  EM  KG    +
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T+ T+L+GL RA ++ +A  LFNEM E  V P+  T+  +I G+C++G+M+KA      
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567

Query: 266 MTQKSIKPDIVTYNTLI-----------------------------------DGFCKVGE 290
           MT+K I PD  +Y  LI                                    GFC+ G+
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627

Query: 291 MEKANKLWADMISRKISPNYISYGILING----------------------------YCS 322
           +E+A  +  +M+ R +  + + YG+LI+G                            Y S
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687

Query: 323 M-------GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           M       G   EAF +W  M+ +G  P  V+   +I G C++G  ++A+   SKM    
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747

Query: 376 VDPDSISYNTLINGFVREE-NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
             P+ ++Y   ++   + E +M KA  L + +  +GL+ +  TYN+++ GFCRQGR+ ++
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEA 806

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++ RMI  G++PD  TYTT+IN    +N++K+A    + M ++G  PD
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 255/512 (49%), Gaps = 35/512 (6%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D   +F   + +  + P+  T + L++   +      A +L N M   G++P V+ Y  
Sbjct: 173 LDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG 232

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +I  LC+     RAKE++  M   G   +   YN L+   C+K+ + EA  I  +++ + 
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + PD+V++ TL+    +  + +  L    EM      P     + ++ G  + G + EAL
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +   +++ G   ++  YN +++ LC+ +   EA+ LF+ M + G+ P+  T++ LI   
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+ G ++ AL+    M    +K  +  YN+LI+G CK G++  A    A+MI++K+ P  
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  L+ GYCS G + +A RL++EM GKGI P++ +  T++ G  R+G    A +  ++
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV--------------- 415
           M    V P+ ++YN +I G+  E +M KAF  + +M  +G+VPD                
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592

Query: 416 --------------------ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
                               I Y  +L GFCR+G++ ++  +   M+++G++ D   Y  
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           LI+G +   + K  F    EM  RG  PDD  
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 218/409 (53%), Gaps = 7/409 (1%)

Query: 83  RAKEVLDEML-------QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           R++ VLD +L       ++ L P+  T + LL    +  +   A E+F +M   G+ PD+
Sbjct: 168 RSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV 227

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
             ++ +I        L RA      M++ G   + V Y ++I+G C+   V EA+ ++ +
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKD 287

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           +  K    DVVTY T++ GLC+ +      ++ +EML     P     ++L+ G  K G 
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           + +ALNL   +    + P++  YN LID  CK  +  +A  L+  M    + PN ++Y I
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LI+ +C  G +  A     EMV  G+K ++   N++I G+C+ GD S A+ F+++M+++ 
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           ++P  ++Y +L+ G+  +  ++KA  L  +M  +G+ P + T+  +L+G  R G + D+ 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +   M E  + P+R TY  +I G+  + ++ +AF F  EM ++G VPD
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 39/298 (13%)

Query: 223 EADDLFNEML---ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM-TQKSIKPDIVTY 278
           +  D+FN +    E+       +F  LI  + +   +   + +F +M T+ S+ P++ T 
Sbjct: 136 KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTL 195

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           + L+ G  K      A +L+ DM+S  I P+   Y  +I   C +  ++ A  +   M  
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE---- 394
            G    +V  N +I G C+     +A      +  + + PD ++Y TL+ G  + +    
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315

Query: 395 -------------------------------NMDKAFALVSKMENQGLVPDVITYNVILT 423
                                           +++A  LV ++ + G+ P++  YN ++ 
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
             C+  + H++EL+  RM + GL P+  TY+ LI+    +  L  A  F  EM+  G 
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 1/175 (0%)

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           + +LI  Y     V +   ++  M+ K  + P + + + ++ G  +      A E  + M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           VS G+ PD   Y  +I      +++ +A  +++ ME  G   +++ YNV++ G C++ ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            ++  I   +  K L PD  TY TL+ G       +      DEML   F P +A
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  288 bits (736), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 150/474 (31%), Positives = 253/474 (53%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A      M  K   P TV +N L+ +  +         L   M   G+ P V+T   
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +IN LC   R D A   L ++L++G  PD  T+ TL+   C +  + EA  +F +M   G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P++V++ TLI    ++ Q+  A   F EM + G+ P+ V Y  +I+G C+        
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            + +EM++   + DV T NT+++ LC+  M+ EA D+ + M+ RGV P+  T+  L+ GH
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C    ++ A+ +FD M  K    ++++YNTLI+G+CK+  ++KA  L+ +M  ++++PN 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LI+G C +G + +A  L++EMV +G  P LV+  T+    C++    KA   L  
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           +     DPD   Y T+++G  R   ++ A  L S + ++GL P+V TYN+++ G C+QG 
Sbjct: 386 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + ++  +   M + G +P+  TY  +  G +  N         +EML RGF  D
Sbjct: 446 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 499



 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 231/454 (50%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           ++NT  +       L+EA    N M  K   P    +N L+  + K         +  +M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              G+ PD  T   ++   C    +  A     ++ + G  PD  +F+TLI      G++
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
             AL  F +M   G  P+ V Y  +ING C++  V EA  +  EM+ KG   ++VTYN++
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++GLC+         L NEM++  + PD +T  T++   CK+G + +A ++ D+M  + +
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           +P++VTYN L+DG C   E++ A K++  M+ +    N ISY  LINGYC +  V +A  
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 311

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L+ EM  + + P  V+ NT+I G C  G    A     +MV+ G  PD ++Y TL +   
Sbjct: 312 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 371

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +  ++DKA AL+  +E     PD+  Y  IL G CR G + D+  +   +  KGL P+  
Sbjct: 372 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 431

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           TY  +I+G   Q  L EA +   EM + G  P+D
Sbjct: 432 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 465



 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 248/452 (54%), Gaps = 1/452 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ PD  T   +IN+ C    ++ AF  +  +   G +P   T+ +LI GLC +G
Sbjct: 70  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 129

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+M+  G  P+  TY TL+   C+   ++EA  IF EM  +G++P+IV+++
Sbjct: 130 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYN 189

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           +LI    +  +         EM  + ++PD      +++  C+ G V EA  + D M+ +
Sbjct: 190 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 249

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   +VVTYN +++G C    +  A  +F+ M+ +    +  ++ TLI+G+CK  +++KA
Sbjct: 250 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 309

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + LF+ M+++ + P+ VTYNTLI G C VG ++ A  L+ +M++R   P+ ++Y  L + 
Sbjct: 310 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 369

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C   H+ +A  L   + G    P +    TI+ G CR+G+   A +  S + S+G+ P+
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 429

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN +I+G  ++  + +A  L S+M   G  P+  TYN+I  GF R      +  +L 
Sbjct: 430 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 489

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            M+ +G + D ST TTL+ G +S + L ++ +
Sbjct: 490 EMLARGFSVDVST-TTLLVGMLSDDGLDQSVK 520



 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 162/566 (28%), Positives = 267/566 (47%), Gaps = 83/566 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+LC  +++D A   L ++ + G  PD  T+ TLI   C EG + EA  L + M G+G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCR-------- 112
            +P V TY +LINGLCK  +   A  +  EM+  G+SP+  TYN+L+   C+        
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 113 --------------------------KENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                                     KE M +EA ++   M  RGV P++V+++ L+   
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
               ++D A+  F  M     V + + Y  +INGYC+   V +A+ + +EM  +    + 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYNT+++GLC    L +A  LF+EM+ RG  PD  T+ TL    CK+ +++KA+ L   
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +   +  PDI  Y T++DG C+ GE+E A  L++++ S+ + PN  +Y I+I+G C  G 
Sbjct: 386 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA +L+ EM   G  P   + N I +G+ R+ +A +  E L +M++ G   D +S  T
Sbjct: 446 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTT 504

Query: 386 LINGFVREENMDK----------------------------------------------- 398
           L+ G + ++ +D+                                               
Sbjct: 505 LLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDD 564

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A +  ++M +    P  + +  +LT   +         +  +M   G+ PD  T   LIN
Sbjct: 565 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 624

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
                  L  AF    ++L+ GF PD
Sbjct: 625 SFCHLRRLGYAFSVLAKLLKLGFQPD 650



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 243/530 (45%), Gaps = 59/530 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C  +++D A      M  K    + ++YNTLIN YC+   +++A  L   MS + 
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 320

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TYN+LI+GLC  GR   A  +  EM+  G  PD  TY TL    C+  ++ +A 
Sbjct: 321 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 380

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   +      PDI  ++T++    R G+L+ A   F  + S GL P+   Y I+I+G 
Sbjct: 381 ALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 440

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA K+  EM + GC  +  TYN I  G  R        +L  EML RG   D 
Sbjct: 441 CKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 500

Query: 241 YTFTTLIHGHCKDG---------------------------------------------- 254
            T T L+     DG                                              
Sbjct: 501 STTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFN 560

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            ++ AL+ F+ M      P  V +  L+    K+        L   M S  I P+  +  
Sbjct: 561 TLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 620

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
           ILIN +C +  +  AF +  +++  G +P +V+  T++ G C             KM+++
Sbjct: 621 ILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITK 667

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+ PD  +YN+LI+             L+++M N  ++P+V+ ++ ++   C++G +  +
Sbjct: 668 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 727

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++  MI++G+ PD  TYT L++GH  ++ + EA +  D M+ +G VP+
Sbjct: 728 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 777



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 231/524 (44%), Gaps = 62/524 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK   +  A     EM + G  P+  TYN +   + R        +L+  M  +G
Sbjct: 436 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 495

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVL-------------------------------- 88
               V T   L+  L   G     K++L                                
Sbjct: 496 FSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSR 555

Query: 89  --------------DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPD 134
                         + ML M   P T  +  LL    + ++ S    +  +M   G+ PD
Sbjct: 556 SPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPD 615

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           + + + LI  F    +L  A     ++   G  PD V Y  ++NG C+            
Sbjct: 616 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK------------ 663

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
            M+ KG   D+ TYN++++ LC          L NEM+   + P+   F+T++   CK+G
Sbjct: 664 -MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            +  A ++ D+M ++ ++PD+VTY  L+DG C   EM++A K++  M+ +   PN  SY 
Sbjct: 723 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 782

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
           ILINGYC +  + +A  L  +M  +G+    V+ NT+I G C  G    A     +MV+ 
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G  PD ++Y  L++   +  ++ +A  L+  +E   L  D++ YN+ + G CR G +  +
Sbjct: 843 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 902

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA---FRFHDE 475
             +   +  KGL PD  TY  +I+G   +  L EA   FR  DE
Sbjct: 903 RDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 152/562 (27%), Positives = 249/562 (44%), Gaps = 96/562 (17%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LCK+  +D A   L  +E     PD   Y T+++  CR G LE+A  L +++S KGL+P 
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 429

Query: 65  VFTYNSLINGLCKKGRCDRAK-----------------------------------EVLD 89
           V+TYN +I+GLCK+G    A                                    E+L+
Sbjct: 430 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 489

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEA-EEIFCEMSRRG------------------ 130
           EML  G S D +T  TLLV     + + ++ ++I C+ S                     
Sbjct: 490 EMLARGFSVDVST-TTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSS 548

Query: 131 ----------------------------VAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
                                         P  V F+ L+   ++       L    +M 
Sbjct: 549 HNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMD 608

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
           S G+ PD     I+IN +C    +  A  +  ++L+ G   DVVTY T++NGLC+     
Sbjct: 609 SFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK----- 663

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
                   M+ +G+ PD +T+ +LIH  C          L + M    I P++V ++T++
Sbjct: 664 --------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 715

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           D  CK G +  A+ +   MI R + P+ ++Y  L++G+C    + EA +++  MV KG  
Sbjct: 716 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 775

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P + S N +I GYC+     KA   L +M  +G+  D+++YNTLI+G      +  A AL
Sbjct: 776 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 835

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M   G +PD++TY ++L   C+   + ++ ++L  +    L+ D   Y   I+G   
Sbjct: 836 FHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCR 895

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
              L+ A      +  +G  PD
Sbjct: 896 AGELEAARDLFSNLSSKGLQPD 917



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 196/385 (50%)

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
           ++++NT   +      + EA   F  M  +   P  V F+ L+   ++       L   R
Sbjct: 10  SSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSR 69

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           +M S G+ PD     I+IN  C    V  A     ++L+ G   D  T+ T++ GLC   
Sbjct: 70  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 129

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            + EA  LF++M+  G  P+  T+ TLI+G CKD  + +A N+F  M  K I P+IVTYN
Sbjct: 130 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYN 189

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           +LI G CK+ E +    L  +M+  KI P+  +   +++  C  G V EA  +   M+ +
Sbjct: 190 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 249

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           G++P +V+ N ++ G+C   +   A +    MV +    + ISYNTLING+ + +++DKA
Sbjct: 250 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 309

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             L  +M  Q L P+ +TYN ++ G C  GR+ D+  +   M+ +G  PD  TY TL + 
Sbjct: 310 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 369

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
                +L +A      +    + PD
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPD 394



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 185/363 (50%), Gaps = 13/363 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ PD  T N LIN++C    L  AF ++  +   G +P V TY +L+NGLCK  
Sbjct: 606 QMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-- 663

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
                      M+  G+SPD  TYN+L+   C          +  EM    + P++V FS
Sbjct: 664 -----------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFS 712

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T++    + G +  A      M   G+ PD V YT +++G+C    + EA+K+ D M+ K
Sbjct: 713 TVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 772

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           GCV +V +YN ++NG C+ + + +A  L  +M  +G+  D  T+ TLIHG C  G +  A
Sbjct: 773 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 832

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + LF  M      PD+VTY  L+D  CK   + +A  L   +    +  + + Y I I+G
Sbjct: 833 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 892

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G +  A  L+  +  KG++P + + N +I G C+ G   +A++   KM    +  +
Sbjct: 893 MCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952

Query: 380 SIS 382
           S S
Sbjct: 953 STS 955



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 161/295 (54%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           LC+M  KG+ PD  TYN+LI+A C     +    L+N M    + P V  ++++++ LCK
Sbjct: 661 LCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           +G    A +V+D M++ G+ PD  TY  L+   C +  M EA ++F  M  +G  P++ S
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ LI  + +  ++D+A+    +M   GL+ D V Y  +I+G C  G +  A+ +  EM+
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G + D+VTY  +L+ LC+   L EA  L   +    +  D   +   I G C+ G + 
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            A +LF  ++ K ++PD+ TYN +I G CK G +++ANKL+  M    I  N  S
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 153/271 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC   +       L EM    + P+ V ++T+++A C+EG +  A  +++ M  +G
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY +L++G C +   D A +V D M+  G  P+  +YN L+   C+ + M +A 
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 798

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +MS +G+  D V+++TLI      G+L  A+  F EM ++G +PD V Y I+++  
Sbjct: 799 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 858

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+N  + EA+ +   +       D++ YN  ++G+CRA  L  A DLF+ +  +G+ PD 
Sbjct: 859 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 918

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
            T+  +IHG CK G +++A  LF  M +  I
Sbjct: 919 RTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 135/237 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK+  I  A   +  M ++GV PD VTY  L++ +C    ++EA ++ ++M  KG
Sbjct: 714 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 773

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V +YN LING C+  R D+A  +L++M   GL  DT TYNTL+   C    +  A 
Sbjct: 774 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 833

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM   G  PD+V++  L+    +N  L  A++  + ++ + L  D ++Y I I+G 
Sbjct: 834 ALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 893

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           CR G +  A  +   +  KG   DV TYN +++GLC+  +L EA+ LF +M E  ++
Sbjct: 894 CRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIW 950


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  288 bits (736), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 258/483 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCKD  +  A+  + ++ +  + PDT TY ++I  +CR+  L+ A Q+ N M+ +G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TY++LINGLC  GR + A +++ EM+  G+ P   T    ++  C      +A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G  P++ +++ LI     +G L  A+  F  M   G+ P+ V Y  +IN  
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             N  +  A  + + M   GC  ++VTYN ++ G C      +A  + N ML+RG   + 
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I G+C  GN   AL + D+M     KPD  +Y  LI GFCK+ +ME A  L+ +
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN ++Y  LI+GYC    +  A  L   M   G +P + + N +I G  +  +
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A+E    M+ EG+ P+ ++Y  +I+G  +  +   A  + +KM  QG +P+++TY+ 
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++G++ ++E +   +   GL PD  TY  +I  ++    ++ AF F   M++ G
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700

Query: 481 FVP 483
             P
Sbjct: 701 CQP 703



 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 256/468 (54%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL  + Q G+      Y+ L+    R G         + M  +G++P +  YN++IN LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K G    A+ ++ ++ +  +SPDT TY ++++  CRK ++  A ++F +M++ G  P+ V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++STLI     +G+++ A    REM   G++P     T  I   C  G   +A ++  +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             KGC  +V TY  +++GLC + +L  A  LF+ M   GVFP+  T+  LI+   ++  +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
             A  + ++M +    P+IVTYN +I G+C +G+ +KA  +  +M+ R  S N ++Y  +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I GYC  G+ T A R+   M   G KP   S   +I G+C+      A    ++MV +G+
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+ ++Y  LI+G+ ++E +D A +L+  M+  G  P+V TYNV++ G  +Q     +E 
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   MIE+G+ P+  TYT +I+G     +   A    ++M+++G +P+
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634



 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 161/484 (33%), Positives = 249/484 (51%), Gaps = 8/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C+ H +DSA     +M ++G  P+TVTY+TLIN  C  G + EAF L+  M   G
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T    I  LC  G  + A  +  +M   G  P+  TY  L+   C    +  A 
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAI 375

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  MSR GV P+ V+++ LI I   N ++  A +    M   G  P+ V Y  +I GY
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A+ + + ML++G   ++VTYNTI+ G C +   T A  + + M + G  PD 
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++T LI G CK   M  A  LF+ M    + P+ VTY  LIDG+CK  +++ A  L   
Sbjct: 496 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y +LI+G     + + A  L   M+ +GI P +V+   +I G C++G 
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A E  +KM+ +G  P+ ++Y++LI    +E  +++A  L +++E  GL+PD ITY  
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++  +   G++  +   L RMI+ G  P   TY  LI G      LK  +   D+ L   
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG------LKNEYLLADQRL--A 727

Query: 481 FVPD 484
            +PD
Sbjct: 728 ALPD 731



 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 223/439 (50%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +      ++ +S  GL+ G+F Y++L+  L + G      +    ML  G+ P+   YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   C+  N+++AE I  ++    ++PD  +++++I    R   LD AL  F +M   G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+ V Y+ +ING C +G V EA  +  EM+  G +    T    +  LC      +A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            LF +M  +G  P+ YT+T LI G C  G +  A+ LF  M++  + P+ VTYN LI+  
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
            +   ++ A  +   M     SPN ++Y  +I GYC +G   +A  +   M+ +G    L
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ NTIIKGYC SG+ + A   L  M   G  PD  SY  LI GF +   M+ AF L ++
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M + GL P+ +TY  ++ G+C+  ++  +  +L  M   G  P+  TY  LI+G   QNN
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580

Query: 466 LKEAFRFHDEMLQRGFVPD 484
              A      M++ G  P+
Sbjct: 581 FSGAEELCKVMIEEGIFPN 599



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 257/542 (47%), Gaps = 59/542 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC    +  A      M + GV+P+TVTYN LIN       ++ AF ++N M   G
Sbjct: 361 LISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +I G C  G   +A  V++ MLQ G S +  TYNT++   C   N + A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   G  PD  S++ LI  F +  +++ A   F EM   GL P+ V YT +I+GY
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  +  A  + + M   GC  +V TYN +++GL +    + A++L   M+E G+FP+ 
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I G CK+G+ + AL +F+ M ++   P+++TY++LI    + G++E+A  L+A+
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFR-------------LW-YEMVGKGIK---- 342
           +    + P+ I+Y  +I  Y   G V  AF              LW Y ++ KG+K    
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720

Query: 343 ---------PTLV-SC-------------------------------NTIIKGYCRSGDA 361
                    P +V +C                               N ++     +G  
Sbjct: 721 LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 780

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A+E L  M+S+G+ PD  +YN+L+   +R  N+D A  +   M  QG    +  Y  +
Sbjct: 781 FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +   C+  R  ++ +    M+ +  NPD      LI+G +          F   M  R +
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 900

Query: 482 VP 483
           +P
Sbjct: 901 MP 902



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 176/335 (52%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           + R + +   +  +GL      Y+ ++    R G     +     ML +G   +++ YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++N LC+   + +A+ +  ++ E  + PD +T+T++I GHC+  +++ AL +F+ M ++ 
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            +P+ VTY+TLI+G C  G + +A  L  +MI   I P   +    I   C MG   +A+
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           RL+ +M  KG +P + +   +I G C SG    A     +M  +GV P++++YN LIN  
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
           V    +  AF +++ M   G  P+++TYN ++ G+C  G    + L++  M+++G + + 
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            TY T+I G+    N   A R  D M   G  PD+
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 189/380 (49%), Gaps = 1/380 (0%)

Query: 107 LVESCR-KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L++SC  KE M+        +S+ G+   + ++S L+   SR G     +  +  M S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           + P+ ++Y  +IN  C++G V +A  +  ++ E     D  TY +++ G CR   L  A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            +FN+M + G  P+  T++TLI+G C  G +N+A +L   M    I P   T    I   
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C +G  E A +L+ DM ++   PN  +Y  LI+G C  G +  A  L++ M   G+ P  
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ N +I     +     A   L+ M   G  P+ ++YN +I G+    +  KA  +++ 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  +G   +++TYN I+ G+C  G    +  IL  M + G  PD  +YT LI G    + 
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
           ++ AF   +EM+  G  P++
Sbjct: 511 MESAFGLFNEMVDDGLCPNE 530



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 206/480 (42%), Gaps = 59/480 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C       A + +  M Q+G   + VTYNT+I  YC  G    A ++++ M   G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP  ++Y  LI G CK  + + A  + +EM+  GL P+  TY  L+   C+ E +  A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G  P++ +++ LI   ++      A    + M   G+ P+ V YT +I+G 
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG    AL+M ++M+E+GC+ +++TY++++  L +   + EA++LF E+   G+ PD 
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQ--------------KSIK-------------P 273
            T+  +I  +   G +  A N    M +              K +K             P
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730

Query: 274 DIV--------------------------------TYNTLIDGFCKVGEMEKANKLWADM 301
           D+V                                  N L+      G   +AN+L   M
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           IS+ + P+  +Y  L+     + +V  A  ++  M  +G +  L     +I   C+    
Sbjct: 791 ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 850

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A      M+    +PD +    LI+G +R+   D     +  ME +  +P    Y ++
Sbjct: 851 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  288 bits (736), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 155/472 (32%), Positives = 258/472 (54%), Gaps = 6/472 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   G+ PD +T N LIN YC    ++    ++  M  +G  P   T+ SL+ GLC   R
Sbjct: 118 MSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSR 177

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG------VAPD 134
              A  +L +M++MG  P+  TY TLL   C   N   A ++  EM          + P+
Sbjct: 178 ISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPN 237

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           +V + T+I    ++G +D+    F EMK  G+ PD V Y+ II+G C  G    A  + +
Sbjct: 238 LVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFN 297

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM+++G   +VVT+N +++ LC+A  + EA+ L   M++RG  PD +T+ TLI G C +G
Sbjct: 298 EMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEG 357

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            ++ A +LF  M  K I+ D V+YN LI+G+CK G M +A KL+ +M+ ++I P  I+Y 
Sbjct: 358 RIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYN 417

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            L+ G    G V +A+ L+ EM    + P   + N ++ G C++   S+A E    + + 
Sbjct: 418 TLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENH 477

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
              P    +N LI+G  +   ++ A  L +++ ++GL P+VITY V++ G C+ G++ ++
Sbjct: 478 DFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENA 537

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + +   M EKG  P+  T+ TL+ G    + +++      EM ++ F PD +
Sbjct: 538 KDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAS 589



 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 256/464 (55%), Gaps = 6/464 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C  +K+D     L EM ++G  P+TVT+ +L+   C    + EA  L+  M   G
Sbjct: 133 LINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMG 192

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ------MGLSPDTATYNTLLVESCRKE 114
            +P V TY +L+NGLC  G    A ++ +EML       + + P+   Y T++   C+  
Sbjct: 193 YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDG 252

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            + + +E+F EM  RG++PD+V++S++I      G+ + A   F EM   G+ P+ V + 
Sbjct: 253 LIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFN 312

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+  C+ G + EA  +   M+++G   D  TYNT+++G C    + +A DLF  M  +
Sbjct: 313 VLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK 372

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G+  D  ++  LI+G+CK G M +A  L+  M  K I P ++TYNTL+ G  + G++  A
Sbjct: 373 GIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDA 432

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L+ +M    ++P   +Y IL++G C   H++EA  L++ +     +P++   N +I G
Sbjct: 433 WNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDG 492

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C++     A E  +++  EG++P+ I+Y  +I+G  +   ++ A  L   ME +G  P+
Sbjct: 493 LCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPN 552

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++T+N ++ GFC+   M     +L  M EK  +PD ST + +++
Sbjct: 553 LVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVD 596



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 224/385 (58%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           + P+ V Y T+I++ C++G +++  +L   M G+G+ P V  Y+S+I+G+C  GR + AK
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            + +EM+  G+ P+  T+N L+   C+   M EA  +   M +RG +PD  +++TLI  F
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G++D A   F  M+S G+  D V Y ++INGYC++G ++EA K+  EM+ K  +  V
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TYNT+L GL R   + +A +LF EM    + P+  T+  L+ G CK+ ++++A+ LF  
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY 473

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +     +P I  +N LIDG CK  ++E A +L+  +    + PN I+Y ++I+G C  G 
Sbjct: 474 LENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQ 533

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  L+  M  KG  P LV+ NT+++G+C++ +  K  E L +M  +   PD+ + + 
Sbjct: 534 LENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISI 593

Query: 386 LINGFVREENMDKAFALVSKMENQG 410
           +++   ++E   +   L+     QG
Sbjct: 594 VVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 213/396 (53%), Gaps = 8/396 (2%)

Query: 97  SPDTATYNTLLVESCRKENM--SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           +PD       L  +C+  ++  SEA  +F  +      P I SF+TL+G  ++  +    
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
           +  ++ M   GL PD +   I+IN YC    V   L +  EML +G   + VT+ +++ G
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK----- 269
           LC    ++EA  L  +M+  G  P+  T+ TL++G C  GN   A+ L + M        
Sbjct: 172 LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFG 231

Query: 270 -SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
            +IKP++V Y T+ID  CK G ++K  +L+ +M  R ISP+ ++Y  +I+G C  G    
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+ EMV +G+ P +V+ N +I   C++G   +A+  L  M+  G  PD+ +YNTLI+
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID 351

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           GF  E  +D A  L   ME++G+  D ++YNV++ G+C+ GRM +++ +   M+ K + P
Sbjct: 352 GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMP 411

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              TY TL+ G   +  +++A+    EM      P+
Sbjct: 412 TVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPE 447



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 213/416 (51%), Gaps = 8/416 (1%)

Query: 76  CKKGRCDRAK--EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
           CK G   R++   V + ++ M  +P  +++NTLL    + +   +   ++  MS  G+AP
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D ++ + LI  +    ++D  L    EM   G  P+ V +T ++ G C    + EA  + 
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVF-----PDFYTFTTLI 247
            +M+  G   +VVTY T+LNGLC       A  L  EML   G F     P+   + T+I
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
              CKDG ++K   LF  M  + I PD+V Y+++I G C  G  E A  L+ +M+   + 
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN +++ +LI+  C  G + EA  L   M+ +G  P   + NT+I G+C  G    A + 
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
              M S+G++ D++SYN LING+ +   M +A  L  +M  + ++P VITYN +LTG  R
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +G++ D+  +   M    L P+  TY  L++G    N+L EA      +    F P
Sbjct: 426 EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP 481



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 143/263 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C + +ID A+     ME KG+  D V+YN LIN YC+ G + EA +L   M  K 
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+L+ GL ++G+   A  +  EM    L+P++ TYN LL   C+  ++SEA 
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAM 468

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  +      P I  F+ LI    +  +++ A   F  +   GL P+ + YT++I+G 
Sbjct: 469 ELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGL 528

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  A  +   M EKGC  ++VT+NT++ G C+   + +  +L  EM E+   PD 
Sbjct: 529 CKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDA 588

Query: 241 YTFTTLIHGHCKDGNMNKALNLF 263
            T + ++    KD    + L+L 
Sbjct: 589 STISIVVDLLSKDEKYREYLHLL 611


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  288 bits (736), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 149/474 (31%), Positives = 260/474 (54%), Gaps = 6/474 (1%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C    + +A   L EM+  G  PD  T+  +I A    G L+ A   + SM   G  P V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TY +LI    +  + + A ++L+EM + G  P+  TYN L+   C+   +  A+++  +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M   G AP++++F++L+  F + G +D A      M + G+ P+ V Y+ +I+G C++  
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
            LEA ++ +EM   G   D  TY+ +++GLC+A  + EA+ +   M   G  PD   +++
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI-SR 304
           +IH  CK G + +A      M ++   PD+VTYNT+IDG CK+G++ +A  +   M  S 
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + P+ ++Y  +ING C    + EA +L   M   G  P +V+  TII G C+ G   +A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           +  L  M   G  P+ ++Y TLI+G  +   +D+A  ++ +M N G  P+++TYN ++ G
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 425 FCRQGRMHDSELILWRMIE--KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            C  GR+ +++ ++ RM +     +PD +TY T++N  +S + ++EA +  ++M
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 145/409 (35%), Positives = 233/409 (56%), Gaps = 3/409 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  +  K++ A   L EM ++G  P+ VTYN L++A C+   +  A  ++  M   G
Sbjct: 63  LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+NSL++G CK+G  D A+++L  M+  G+ P+  TY+ L+   C+ +   EA+
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM   GV PD  ++S LI    +  +++ A    R M  +G  PD V+Y+ II+ +
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-VFPD 239
           C++G +LEA K   EM ++    DVVTYNT+++GLC+   + EA  + ++M E G V PD
Sbjct: 243 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++T+I+G CK   + +A  L D M +    PD+VTY T+IDG CK G +E+A  L  
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 362

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M     +PN ++Y  LI+G C    V EA R+  EM   G  P LV+ NT++ G C SG
Sbjct: 363 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 422

Query: 360 DASKADEFLSKMVSEGVD--PDSISYNTLINGFVREENMDKAFALVSKM 406
              +A + + +M     +  PD+ +Y T++N  +  + + +A  L+ +M
Sbjct: 423 RIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 215/375 (57%), Gaps = 4/375 (1%)

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           C   ++  A E+  EM   G APD  + + +I   +  G LD A+ + R M   G  P+ 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           V YT +I  + R   + EA+K+ +EM E+GC  ++VTYN +++ LC+  M+  A D+  +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           M+E G  P+  TF +L+ G CK GN++ A  L  IM  K ++P++VTY+ LIDG CK  +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
             +A ++  +M +  ++P+  +Y  LI+G C    + EA ++   M G G  P +V  ++
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           II  +C+SG   +A + L +M  +   PD ++YNT+I+G  +   + +A  ++ +M+  G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 411 -LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            ++PDV+TY+ ++ G C+   + +++ +L RM + G NPD  TYTT+I+G      L+EA
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 470 FRFHDEMLQRGFVPD 484
                 M + G  P+
Sbjct: 358 EYLLQGMKRAGCAPN 372


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  288 bits (736), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 258/483 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCKD  +  A+  + ++ +  + PDT TY ++I  +CR+  L+ A Q+ N M+ +G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TY++LINGLC  GR + A +++ EM+  G+ P   T    ++  C      +A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G  P++ +++ LI     +G L  A+  F  M   G+ P+ V Y  +IN  
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             N  +  A  + + M   GC  ++VTYN ++ G C      +A  + N ML+RG   + 
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I G+C  GN   AL + D+M     KPD  +Y  LI GFCK+ +ME A  L+ +
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN ++Y  LI+GYC    +  A  L   M   G +P + + N +I G  +  +
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A+E    M+ EG+ P+ ++Y  +I+G  +  +   A  + +KM  QG +P+++TY+ 
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++G++ ++E +   +   GL PD  TY  +I  ++    ++ AF F   M++ G
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700

Query: 481 FVP 483
             P
Sbjct: 701 CQP 703



 Score =  274 bits (700), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 256/468 (54%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL  + Q G+      Y+ L+    R G         + M  +G++P +  YN++IN LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K G    A+ ++ ++ +  +SPDT TY ++++  CRK ++  A ++F +M++ G  P+ V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++STLI     +G+++ A    REM   G++P     T  I   C  G   +A ++  +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             KGC  +V TY  +++GLC + +L  A  LF+ M   GVFP+  T+  LI+   ++  +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
             A  + ++M +    P+IVTYN +I G+C +G+ +KA  +  +M+ R  S N ++Y  +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I GYC  G+ T A R+   M   G KP   S   +I G+C+      A    ++MV +G+
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+ ++Y  LI+G+ ++E +D A +L+  M+  G  P+V TYNV++ G  +Q     +E 
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   MIE+G+ P+  TYT +I+G     +   A    ++M+++G +P+
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 161/484 (33%), Positives = 249/484 (51%), Gaps = 8/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C+ H +DSA     +M ++G  P+TVTY+TLIN  C  G + EAF L+  M   G
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T    I  LC  G  + A  +  +M   G  P+  TY  L+   C    +  A 
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  MSR GV P+ V+++ LI I   N ++  A +    M   G  P+ V Y  +I GY
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A+ + + ML++G   ++VTYNTI+ G C +   T A  + + M + G  PD 
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++T LI G CK   M  A  LF+ M    + P+ VTY  LIDG+CK  +++ A  L   
Sbjct: 496 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y +LI+G     + + A  L   M+ +GI P +V+   +I G C++G 
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A E  +KM+ +G  P+ ++Y++LI    +E  +++A  L +++E  GL+PD ITY  
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++  +   G++  +   L RMI+ G  P   TY  LI G      LK  +   D+ L   
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG------LKNEYLLADQRL--A 727

Query: 481 FVPD 484
            +PD
Sbjct: 728 ALPD 731



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 223/439 (50%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +      ++ +S  GL+ G+F Y++L+  L + G      +    ML  G+ P+   YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   C+  N+++AE I  ++    ++PD  +++++I    R   LD AL  F +M   G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+ V Y+ +ING C +G V EA  +  EM+  G +    T    +  LC      +A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            LF +M  +G  P+ YT+T LI G C  G +  A+ LF  M++  + P+ VTYN LI+  
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
            +   ++ A  +   M     SPN ++Y  +I GYC +G   +A  +   M+ +G    L
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ NTIIKGYC SG+ + A   L  M   G  PD  SY  LI GF +   M+ AF L ++
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M + GL P+ +TY  ++ G+C+  ++  +  +L  M   G  P+  TY  LI+G   QNN
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580

Query: 466 LKEAFRFHDEMLQRGFVPD 484
              A      M++ G  P+
Sbjct: 581 FSGAEELCKVMIEEGIFPN 599



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 257/542 (47%), Gaps = 59/542 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC    +  A      M + GV+P+TVTYN LIN       ++ AF ++N M   G
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +I G C  G   +A  V++ MLQ G S +  TYNT++   C   N + A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   G  PD  S++ LI  F +  +++ A   F EM   GL P+ V YT +I+GY
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  +  A  + + M   GC  +V TYN +++GL +    + A++L   M+E G+FP+ 
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I G CK+G+ + AL +F+ M ++   P+++TY++LI    + G++E+A  L+A+
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFR-------------LW-YEMVGKGIK---- 342
           +    + P+ I+Y  +I  Y   G V  AF              LW Y ++ KG+K    
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720

Query: 343 ---------PTLV-SC-------------------------------NTIIKGYCRSGDA 361
                    P +V +C                               N ++     +G  
Sbjct: 721 LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 780

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A+E L  M+S+G+ PD  +YN+L+   +R  N+D A  +   M  QG    +  Y  +
Sbjct: 781 FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +   C+  R  ++ +    M+ +  NPD      LI+G +          F   M  R +
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 900

Query: 482 VP 483
           +P
Sbjct: 901 MP 902



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 176/335 (52%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           + R + +   +  +GL      Y+ ++    R G     +     ML +G   +++ YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++N LC+   + +A+ +  ++ E  + PD +T+T++I GHC+  +++ AL +F+ M ++ 
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            +P+ VTY+TLI+G C  G + +A  L  +MI   I P   +    I   C MG   +A+
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           RL+ +M  KG +P + +   +I G C SG    A     +M  +GV P++++YN LIN  
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
           V    +  AF +++ M   G  P+++TYN ++ G+C  G    + L++  M+++G + + 
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            TY T+I G+    N   A R  D M   G  PD+
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 189/380 (49%), Gaps = 1/380 (0%)

Query: 107 LVESCR-KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L++SC  KE M+        +S+ G+   + ++S L+   SR G     +  +  M S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           + P+ ++Y  +IN  C++G V +A  +  ++ E     D  TY +++ G CR   L  A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            +FN+M + G  P+  T++TLI+G C  G +N+A +L   M    I P   T    I   
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C +G  E A +L+ DM ++   PN  +Y  LI+G C  G +  A  L++ M   G+ P  
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ N +I     +     A   L+ M   G  P+ ++YN +I G+    +  KA  +++ 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  +G   +++TYN I+ G+C  G    +  IL  M + G  PD  +YT LI G    + 
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
           ++ AF   +EM+  G  P++
Sbjct: 511 MESAFGLFNEMVDDGLCPNE 530



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 206/480 (42%), Gaps = 59/480 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C       A + +  M Q+G   + VTYNT+I  YC  G    A ++++ M   G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP  ++Y  LI G CK  + + A  + +EM+  GL P+  TY  L+   C+ E +  A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R G  P++ +++ LI   ++      A    + M   G+ P+ V YT +I+G 
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG    AL+M ++M+E+GC+ +++TY++++  L +   + EA++LF E+   G+ PD 
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQ--------------KSIK-------------P 273
            T+  +I  +   G +  A N    M +              K +K             P
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730

Query: 274 DIV--------------------------------TYNTLIDGFCKVGEMEKANKLWADM 301
           D+V                                  N L+      G   +AN+L   M
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           IS+ + P+  +Y  L+     + +V  A  ++  M  +G +  L     +I   C+    
Sbjct: 791 ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 850

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A      M+    +PD +    LI+G +R+   D     +  ME +  +P    Y ++
Sbjct: 851 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  288 bits (736), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 160/495 (32%), Positives = 262/495 (52%), Gaps = 32/495 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC  +++D+A   L +M + G  P++V Y TLI+A  +   + EA +L+  M   G
Sbjct: 214 VMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMG 273

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+N +I GLC+  R     +++D ML  G +P+  TY  L+   CR   + EA+
Sbjct: 274 CLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQ 333

Query: 121 EI--------------------------------FCEMSRRGVAPDIVSFSTLIGIFSRN 148
            +                                + +M + G  PD+ +F+TLI    + 
Sbjct: 334 VLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKK 393

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G +  A+    +M + G  P+ + YT +++G+C+   + EA  + +EM  KG  ++++ Y
Sbjct: 394 GLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGY 453

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N +L  LC+   + +A D+  EM ++G  PD +TF TLI G CK      AL L+  M  
Sbjct: 454 NVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLL 513

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             +  + VTYNTLI  F + G +++A KL  DM+ R    + I+Y  LI  +C +G   +
Sbjct: 514 DGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEK 573

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+ EMV K + P+ +SCN +I G CR G    A E L  M+  G+ PD ++YN+LIN
Sbjct: 574 ALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLIN 633

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  +  N+ +AF L +K++ +G+ PD ITYN ++   CR G   D+ L+L R +E    P
Sbjct: 634 GLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIP 693

Query: 449 DRSTYTTLINGHVSQ 463
           +  T+  L++  + +
Sbjct: 694 NDVTWYILVSNFIKE 708



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 257/549 (46%), Gaps = 74/549 (13%)

Query: 10  KIDSAKMF------LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-KGLK 62
           K+ +AK F      L +++++G+      +  ++  Y R     +A +++  M G    +
Sbjct: 111 KLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCE 170

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P   +YN +++ L        A  V  EML  G+ P   T+  ++   C    +  A  +
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             +M++ G  P+ V + TLI   S+  +++ AL    EM   G +PD   +  +I G CR
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN------------- 229
              + E  K+ D ML +G   + +TY  ++NGLCR   + EA  L N             
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTIL 350

Query: 230 -------------------EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
                              +M++ G  PD +TF TLIHG CK G M  A+++ + M+   
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG 410

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
             P+++TY TL+DGFCK  ++E+A  +  +M ++    N + Y +L+   C  G V +A 
Sbjct: 411 CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKAL 470

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            +  EM  KG KP + + NT+I G C+      A      M+ +GV  ++++YNTLI+ F
Sbjct: 471 DMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAF 530

Query: 391 VREENMDKAFALVSKMENQG-----------------------------------LVPDV 415
           +R   + +A  LV+ M  +G                                   LVP  
Sbjct: 531 LRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSN 590

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           I+ N+++ G CR G++ ++  +L  MI +GL PD  TY +LING     N++EAF   ++
Sbjct: 591 ISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNK 650

Query: 476 MLQRGFVPD 484
           +   G  PD
Sbjct: 651 LQAEGIQPD 659



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 6/289 (2%)

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           +KG       Y+ +++ L  AK     D L  ++ E G+      F  ++  + +     
Sbjct: 95  QKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPG 154

Query: 258 KALN-LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           +A   L D+      +P   +YN ++D          A  ++ +M+S+ + P   ++G++
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVV 214

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           +   C +  V  A  L  +M   G  P  V   T+I    +    ++A + L +M   G 
Sbjct: 215 MKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGC 274

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD  ++N +I G  R   + +   LV +M  +G  P+ ITY V++ G CR G++ ++++
Sbjct: 275 LPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQV 334

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF-HDEMLQRGFVPD 484
           +L     K   P+   +T LING+V    L EA  F +D+M++ G  PD
Sbjct: 335 LL----NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPD 379


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 155/478 (32%), Positives = 254/478 (53%), Gaps = 3/478 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L ++ +++    FL  M  +G  PD +   +LI  +CR G   +A ++M  +   G  P 
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V TYN LI G CK G  D+A +VL+   +M ++PD  TYNT+L   C    + EA E+  
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLE---RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
              +R   PD+++++ LI     +  + +A+    EM+  G  PD V Y ++ING C+ G
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA+K  + M   GC  +V+T+N IL  +C      +A+ L  +ML +G  P   TF 
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI+  C+   + +A+++ + M +    P+ ++YN L+ GFC+  +M++A +    M+SR
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y  L+   C  G    A  +  ++  KG  P L++ NT+I G  + G    A
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 473

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E L +M  +G+ PD I+Y+TL+ G   E  +D+A  +   ME   + P  +TYN I+ G
Sbjct: 474 AELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 533

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            C+  +   +   L  M+EKG  P ++TYT LI G   +   +EA    +E+  RGFV
Sbjct: 534 LCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSRGFV 591



 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 230/425 (54%), Gaps = 3/425 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  K   A   +  +E  G  PD +TYN LI  YC+ G +++A Q++  MS   
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS--- 204

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+++  LC  G+   A EVLD  +Q    PD  TY  L+  +C    + +A 
Sbjct: 205 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAM 264

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM ++G  PD+V+++ LI    + G+LD A+ +   M   G  P+ + + II+   
Sbjct: 265 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSM 324

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  ++A ++  +ML KGC   VVT+N ++N LCR ++L  A D+  +M + G  P+ 
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  L+HG C++  M++A+   +IM  +   PDIVTYNTL+   CK G+ + A ++   
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ 444

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+  SP  I+Y  +I+G   +G    A  L  EM  KG+KP +++ +T+++G    G 
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    M    + P +++YN ++ G  + +   +A   ++ M  +G  P   TY +
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564

Query: 421 ILTGF 425
           ++ G 
Sbjct: 565 LIEGI 569



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 216/381 (56%), Gaps = 3/381 (0%)

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           N  L +  R   + E  +    M  +G  PD+++ ++LI  F R+G+  +A      +++
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
           +G VPD + Y ++I GYC++G + +AL++ + M       DVVTYNTIL  LC +  L E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A ++ +  ++R  +PD  T+T LI   C D  + +A+ L D M +K  KPD+VTYN LI+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           G CK G +++A K   +M      PN I++ I++   CS G   +A RL  +M+ KG  P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           ++V+ N +I   CR     +A + L KM   G  P+S+SYN L++GF +E+ MD+A   +
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
             M ++G  PD++TYN +LT  C+ G+   +  IL ++  KG +P   TY T+I+G    
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 467

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
              + A    +EM ++G  PD
Sbjct: 468 GKTEYAAELLEEMRRKGLKPD 488



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 217/410 (52%), Gaps = 4/410 (0%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
           F  N  +  L + G  +   + L+ M+  G  PD     +L+   CR     +A  I   
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           +   G  PD+++++ LIG + ++G++D+AL     M  A   PD V Y  I+   C +G 
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGK 224

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + EA+++ D  +++ C  DV+TY  ++   C    + +A  L +EM ++G  PD  T+  
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI+G CK+G +++A+   + M     +P+++T+N ++   C  G    A +L ADM+ + 
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
            SP+ +++ ILIN  C    +  A  +  +M   G  P  +S N ++ G+C+     +A 
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E+L  MVS G  PD ++YNTL+    ++   D A  +++++ ++G  P +ITYN ++ G 
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR-FHD 474
            + G+   +  +L  M  KGL PD  TY+TL+ G   +  + EA + FHD
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHD 514



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +  + N  +   VR   +++    + +M  QG +PDVI    ++ GFCR G+   +  I+
Sbjct: 106 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIM 165

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +   G  PD  TY  LI G+     + +A +  + M      PD
Sbjct: 166 EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPD 208


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 142/403 (35%), Positives = 243/403 (60%), Gaps = 8/403 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL K ++    +    EM ++ + P+  T+N  IN  C+ G L +A  ++  +   G
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWG 230

Query: 61  LKPGVFTYNSLINGLCKKGRCD---RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             P + TYN+LI+G CKKG      RA  +L EML   + P+  T+NTL+   C+ EN+ 
Sbjct: 231 FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVL 290

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A+  F EM R+G+ P+IV++++LI   S NG+LD A+  + +M   GL P+ V +  +I
Sbjct: 291 AAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALI 350

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG+C+   + EA K+ D++ E+  V + +T+NT+++  C+A M+ E   L N ML+ G+F
Sbjct: 351 NGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIF 410

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  LI G C++ N+  A  L + M    +K D+VTYN LI G+CK GE  KA KL
Sbjct: 411 PNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKL 470

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M++  + PN+++Y  L++GYC  G++  A ++  +M  +G +  +V+ N +IKG+C+
Sbjct: 471 LGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCK 530

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           +G    A+  L++M+ +G++P+  +Y+      VR E ++K F
Sbjct: 531 TGKLEDANRLLNEMLEKGLNPNRTTYDV-----VRLEMLEKGF 568



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 148/452 (32%), Positives = 259/452 (57%), Gaps = 19/452 (4%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           L+ AY     +  A ++   +   G K  + + N L++ L K       + V  EM++  
Sbjct: 136 LVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRR 195

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG---QLD 152
           + P+  T+N  +   C+   +++AE++  ++   G +P+IV+++TLI    + G   ++ 
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           RA    +EM +  + P+ + +  +I+G+C++  VL A    +EM  +G   ++VTYN+++
Sbjct: 256 RADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLI 315

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           NGL     L EA  L+++M+  G+ P+  TF  LI+G CK   + +A  LFD + ++ + 
Sbjct: 316 NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLV 375

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+ +T+NT+ID FCK G ME+   L   M+   I PN  +Y  LI G C   +V  A +L
Sbjct: 376 PNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKL 435

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             EM    +K  +V+ N +I G+C+ G+ SKA++ L +M++ GV P+ ++YNTL++G+  
Sbjct: 436 LNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCM 495

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           E N+  A  + ++ME +G   +V+TYNV++ GFC+ G++ D+  +L  M+EKGLNP+R+T
Sbjct: 496 EGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTT 555

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y              +  R   EML++GF+PD
Sbjct: 556 Y--------------DVVRL--EMLEKGFIPD 571



 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/444 (32%), Positives = 247/444 (55%), Gaps = 3/444 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V A   + +I SA      ++  G      + N L++A  +     E   +   M  + 
Sbjct: 136 LVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRR 195

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN---MS 117
           ++P + T+N  INGLCK G+ ++A++V++++   G SP+  TYNTL+   C+K +   M 
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A+ I  EM    + P+ ++F+TLI  F ++  +  A   F EM+  GL P+ V Y  +I
Sbjct: 256 RADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLI 315

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG   NG + EA+ + D+M+  G   ++VT+N ++NG C+ KM+ EA  LF+++ E+ + 
Sbjct: 316 NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLV 375

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  TF T+I   CK G M +   L + M  + I P++ TYN LI G C+   +  A KL
Sbjct: 376 PNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKL 435

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M + ++  + ++Y ILI G+C  G  ++A +L  EM+  G+KP  V+ NT++ GYC 
Sbjct: 436 LNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCM 495

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G+   A +  ++M  EG   + ++YN LI GF +   ++ A  L+++M  +GL P+  T
Sbjct: 496 EGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTT 555

Query: 418 YNVILTGFCRQGRMHDSELILWRM 441
           Y+V+      +G + D E  L+ +
Sbjct: 556 YDVVRLEMLEKGFIPDIEGHLYNI 579



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 176/311 (56%), Gaps = 4/311 (1%)

Query: 170 NVLYT-IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           N L T +++  Y  N  +  A ++   + + G  + + + N +L+ L +     E   ++
Sbjct: 129 NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVY 188

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK- 287
            EM++R + P+  TF   I+G CK G +NKA ++ + +      P+IVTYNTLIDG CK 
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248

Query: 288 --VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
              G+M +A+ +  +M++ KI PN I++  LI+G+C   +V  A   + EM  +G+KP +
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ N++I G   +G   +A     KMV  G+ P+ +++N LINGF +++ + +A  L   
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDD 368

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +  Q LVP+ IT+N ++  FC+ G M +   +   M+++G+ P+ STY  LI G     N
Sbjct: 369 IAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQN 428

Query: 466 LKEAFRFHDEM 476
           ++ A +  +EM
Sbjct: 429 VRAAKKLLNEM 439


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 153/448 (34%), Positives = 245/448 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +  A+ FL +M  KGV PD  TYN LI  Y   G  +EA ++   M    
Sbjct: 264 VVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 323

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T N L+  LCK G+   A++V D M   G +PD  +Y  +L     K  + +  
Sbjct: 324 ILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMT 383

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   G+APDI +FS LI  ++  G LD+A++ F EM+  G+ PD V YT +I   
Sbjct: 384 DLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAAL 443

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A++  ++M+++G   D   Y+ ++ G C    L +A +L  E++  G+  D 
Sbjct: 444 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDI 503

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F+++I+  CK G +  A N+FD+       PD V Y+ L+DG+C VG+MEKA +++  
Sbjct: 504 VFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDA 563

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I PN + YG L+NGYC +G + E   L+ EM+ KGIKP+ +  N II G   +G 
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M   G+  +  +YN ++ GF +    D+A  L  ++    +  D+IT N 
Sbjct: 624 TVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNT 683

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNP 448
           ++ G  +  R+ +++ +   +   GL P
Sbjct: 684 MIAGMFQTRRVEEAKDLFASISRSGLVP 711



 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 266/514 (51%), Gaps = 40/514 (7%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ-LMNSMSGKGLKPGV 65
           + H+ + A  F  ++ + G+  D +  N L+  +C     +EA   L++     G  P V
Sbjct: 127 RAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 186

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGL--SPDTATYNTLLVESCRKENMSEAEEIF 123
           F+Y+ L+  LC +G+  +A ++L  M + G   SPD   Y T++    ++ ++++A ++F
Sbjct: 187 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLF 246

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +RG+ PD+V++S+++    +   + +A  + R+M + G++PDN  Y  +I GY   
Sbjct: 247 KEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 306

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA------------------- 224
           G   EA+++  EM     + DVVT N ++  LC+   + EA                   
Sbjct: 307 GQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 366

Query: 225 ----------------DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
                            DLF+ ML  G+ PD YTF+ LI  +   G ++KA+ +F+ M  
Sbjct: 367 KIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRD 426

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             +KPD+VTY T+I   C++G+M+ A + +  MI + ++P+  +Y  LI G+C+ G + +
Sbjct: 427 HGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 486

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  E++  G++  +V  ++II   C+ G    A       V+ G  PD++ Y+ L++
Sbjct: 487 AKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMD 546

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+     M+KA  +   M + G+ P+V+ Y  ++ G+C+ GR+ +   +   M++KG+ P
Sbjct: 547 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 606

Query: 449 DRSTYTTLING-HVSQNNLKEAFRFHDEMLQRGF 481
               Y  +I+G  V+   +    +FH EM + G 
Sbjct: 607 STILYNIIIDGLFVAGRTVPAKVKFH-EMTESGI 639



 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 237/460 (51%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P + TY  L++   R    E A      +   GL+  +   N L+ G C+  R D A ++
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172

Query: 88  L-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV--APDIVSFSTLIGI 144
           L     ++G  PD  +Y+ LL   C +    +A+++   M+  G   +PD+V+++T+I  
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G +++A   F+EM   G+ PD V Y+ +++  C+   + +A     +M+ KG + D
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             TYN ++ G        EA  +F EM    + PD  T   L+   CK G + +A ++FD
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K   PD+ +Y  +++G+   G +     L+  M+   I+P+  ++ +LI  Y + G
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A  ++ EM   G+KP +V+  T+I   CR G    A E  ++M+ +GV PD  +Y+
Sbjct: 413 MLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 472

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI GF    ++ KA  L+ ++ N G+  D++ ++ I+   C+ GR+ D++ I    +  
Sbjct: 473 CLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNV 532

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G +PD   Y+ L++G+     +++A R  D M+  G  P+
Sbjct: 533 GQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 572



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 200/396 (50%), Gaps = 5/396 (1%)

Query: 96  LSPDTATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           LSP + TY  +L++ C + +  E A   F ++ R G+  DI+  + L+  F    + D A
Sbjct: 111 LSPTSHTY-AILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 169

Query: 155 L-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG--CVMDVVTYNTI 211
           L +        G VPD   Y+I++   C  G   +A  +   M E G  C  DVV Y T+
Sbjct: 170 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTV 229

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++   +   + +A DLF EM++RG+ PD  T+++++H  CK   M KA      M  K +
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            PD  TYN LI G+   G+ ++A +++ +M    I P+ ++  +L+   C  G + EA  
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           ++  M  KG  P + S   ++ GY   G      +    M+ +G+ PD  +++ LI  + 
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYA 409

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
               +DKA  + ++M + G+ PDV+TY  ++   CR G+M D+     +MI++G+ PD+ 
Sbjct: 410 NCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 469

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            Y  LI G  +  +L +A     E++  G   D  F
Sbjct: 470 AYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVF 505



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 143/277 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+  K+D A     +M  +GV PD   Y+ LI  +C  G L +A +L+  +   G
Sbjct: 439 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNG 498

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  +  ++S+IN LCK GR   A+ + D  + +G  PD   Y+ L+   C    M +A 
Sbjct: 499 MRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKAL 558

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M   G+ P++V + TL+  + + G++D  L  FREM   G+ P  +LY III+G 
Sbjct: 559 RVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G  + A     EM E G  ++  TYN +L G  + +   EA  LF E+    V  D 
Sbjct: 619 FVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDI 678

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
            T  T+I G  +   + +A +LF  +++  + P +VT
Sbjct: 679 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 50/347 (14%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE-------ADDLFNEMLERG----- 235
           +A  + DE+  +G  +     N  L  L RA            A  LFN    R      
Sbjct: 51  DAHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPRV 110

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P  +T+  L+    +      AL  F  + +  ++ DI+  N L+ GFC+    ++A 
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 296 KLW----------ADMISRKI----------------------------SPNYISYGILI 317
            +            D+ S  I                            SP+ ++Y  +I
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           + +   G V +A  L+ EMV +GI P LV+ ++++   C++    KA+ FL +MV++GV 
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD+ +YN LI G+       +A  +  +M    ++PDV+T N+++   C+ G++ ++  +
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              M  KG NPD  +Y  ++NG+ ++  L +     D ML  G  PD
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 397


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  287 bits (735), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 154/483 (31%), Positives = 252/483 (52%), Gaps = 1/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN  CK   ++ A  ++ ++ + G+ PD  TY +LI  YC+   L+ AF++ N M  KG
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +     Y  LI+GLC   R D A ++  +M      P   TY  L+   C  E  SEA 
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM   G+ P+I +++ LI       + ++A     +M   GL+P+ + Y  +INGY
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A+ + + M  +    +  TYN ++ G C++  + +A  + N+MLER V PD 
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDV 462

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G C+ GN + A  L  +M  + + PD  TY ++ID  CK   +E+A  L+  
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + ++PN + Y  LI+GYC  G V EA  +  +M+ K   P  ++ N +I G C  G 
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     KMV  G+ P   +   LI+  +++ + D A++   +M + G  PD  TY  
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  +CR+GR+ D+E ++ +M E G++PD  TY++LI G+        AF     M   G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702

Query: 481 FVP 483
             P
Sbjct: 703 CEP 705



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/504 (30%), Positives = 257/504 (50%), Gaps = 20/504 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC   K + A+  L +M +KG+ P+ +TYN LIN YC+ G +E+A  ++  M  + 
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TYN LI G CK     +A  VL++ML+  + PD  TYN+L+   CR  N   A 
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+ RG+ PD  +++++I    ++ +++ A   F  ++  G+ P+ V+YT +I+GY
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  M ++ML K C+ + +T+N +++GLC    L EA  L  +M++ G+ P  
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T T LIH   KDG+ + A + F  M     KPD  TY T I  +C+ G +  A  + A 
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG------ 354
           M    +SP+  +Y  LI GY  +G    AF +   M   G +P+  +  ++IK       
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722

Query: 355 ---------YCRSGDASKAD---EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
                     C   +  + D   E L KMV   V P++ SY  LI G     N+  A  +
Sbjct: 723 GKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKV 782

Query: 403 VSKME-NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
              M+ N+G+ P  + +N +L+  C+  + +++  ++  MI  G  P   +   LI G  
Sbjct: 783 FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDD 485
            +   +        +LQ G+  D+
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDE 866



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/448 (33%), Positives = 233/448 (52%), Gaps = 26/448 (5%)

Query: 62  KPGVFTYNSLINGLCKKG--------------RCDRAKEVL-----------DEMLQMGL 96
           K  V++Y SL+  L   G               CD   + L           DE  ++  
Sbjct: 120 KHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKY 179

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
                 YNTLL    R   + E ++++ EM    V P+I +++ ++  + + G ++ A  
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ 239

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           Y  ++  AGL PD   YT +I GYC+   +  A K+ +EM  KGC  + V Y  +++GLC
Sbjct: 240 YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
            A+ + EA DLF +M +   FP   T+T LI   C     ++ALNL   M +  IKP+I 
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TY  LID  C   + EKA +L   M+ + + PN I+Y  LINGYC  G + +A  +   M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
             + + P   + N +IKGYC+S +  KA   L+KM+   V PD ++YN+LI+G  R  N 
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           D A+ L+S M ++GLVPD  TY  ++   C+  R+ ++  +   + +KG+NP+   YT L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           I+G+     + EA    ++ML +  +P+
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPN 566



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 220/443 (49%), Gaps = 19/443 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+    DSA   L  M  +G+ PD  TY ++I++ C+   +EEA  L +S+  KG
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V  Y +LI+G CK G+ D A  +L++ML     P++ T+N L+   C    + EA 
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M + G+ P + + + LI    ++G  D A   F++M S+G  PD   YT  I  Y
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +L+A  M  +M E G   D+ TY++++ G         A D+   M + G  P  
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707

Query: 241 YTFTTLI-------HGH--------CKDGNM---NKALNLFDIMTQKSIKPDIVTYNTLI 282
           +TF +LI       +G         C   NM   +  + L + M + S+ P+  +Y  LI
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767

Query: 283 DGFCKVGEMEKANKLWADMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
            G C+VG +  A K++  M   + ISP+ + +  L++  C +    EA ++  +M+  G 
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            P L SC  +I G  + G+  +       ++  G   D +++  +I+G  ++  ++  + 
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887

Query: 402 LVSKMENQGLVPDVITYNVILTG 424
           L + ME  G      TY++++ G
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  287 bits (735), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 159/470 (33%), Positives = 259/470 (55%), Gaps = 8/470 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++++  K+ + D   M L EME +G    P+ VTYN +I    R+G LEEA +L+  M  
Sbjct: 210 LLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRL 269

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
              K   FTYN LI GL  +G   +  ++  EM   G+ P   TYN + +    +  + E
Sbjct: 270 SK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAM-IHGLLQSGLVE 327

Query: 119 AEEI-FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           A ++ F EM   G+ PD++++++L+  + + G L  AL+ F +++ AGL P  + Y I I
Sbjct: 328 AAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRI 387

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +GYCR G + EA  +++EM E+GC+ +V TY  ++ G      L  A + F+EML +G+ 
Sbjct: 388 DGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQ 447

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD + + T I      G++ +AL L +++  + I  D VTYN LI G CK G ++ A +L
Sbjct: 448 PDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKEL 507

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M+S  + P+ I+Y  LI+ +C  G + EA +++  M+  G+ P+ V+   II  YCR
Sbjct: 508 QMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCR 567

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G+   A  +  KM+ EGV+P+ I+YN LI+   R      A     +M  +GLV +  T
Sbjct: 568 RGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYT 627

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI---NGHVSQN 464
           Y +++ G C+ G   D+    + M + G++PD  T+  L+   +GHV   
Sbjct: 628 YTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGFDGHVHHT 677



 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/467 (32%), Positives = 260/467 (55%), Gaps = 3/467 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS--GKGLKPGVFTYNSLINGLCK 77
           EM Q G+ P  VTYNTL++++ +EG  ++   L+  M   G G  P   TYN +I GL +
Sbjct: 194 EMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 253

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           KG  + A E+++ M ++     + TYN L+     +  + +  ++  EM   G+ P +V+
Sbjct: 254 KGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVT 312

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ +I    ++G ++ A + F EM++ GL+PD + Y  ++NGYC+ G + EAL +  ++ 
Sbjct: 313 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 372

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G    V+TYN  ++G CR   L EA  L  EM E+G  P+  T+T L+ G     ++ 
Sbjct: 373 RAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLA 432

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            A   FD M  K ++PD   YNT I     +G++ +A +L   ++   IS + ++Y ILI
Sbjct: 433 MAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILI 492

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G C  G++ +A  L  +MV  G++P  ++   +I  +C  G   +A +  + M+S+G+ 
Sbjct: 493 HGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL 552

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P ++++  +I+ + R  N+  A+    KM  +G+ P+ ITYNV++   CR GR   +   
Sbjct: 553 PSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHH 612

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              M+E+GL  ++ TYT LI+G+    N ++A RF+ EM Q G  PD
Sbjct: 613 FHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPD 659



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 230/432 (53%), Gaps = 3/432 (0%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M+  G+ P V   N ++  L    R D    V +EMLQ+G+ P   TYNTLL    ++  
Sbjct: 160 MASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGR 219

Query: 116 MSEAEEIFCEMSRRGVA--PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
             +   +  EM  RG    P+ V+++ +I   +R G L+ A      M+ +     +  Y
Sbjct: 220 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA-SSFTY 278

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +I G    G V +   ++ EM  +G +  VVTYN +++GL ++ ++  A   F EM  
Sbjct: 279 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRA 338

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+ PD  T+ +L++G+CK GN+ +AL LF  + +  + P ++TYN  IDG+C++G++E+
Sbjct: 339 MGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEE 398

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L  +M  +   PN  +Y IL+ G  ++  +  A   + EM+ KG++P   + NT I 
Sbjct: 399 ARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRIC 458

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
                GD ++A E    ++ EG+  D+++YN LI+G  +  N+  A  L  KM + GL P
Sbjct: 459 AELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQP 518

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D ITY  ++   C +G + ++  I   MI  GL P   T+T +I+ +  + NL  A+ + 
Sbjct: 519 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 578

Query: 474 DEMLQRGFVPDD 485
            +ML+ G  P++
Sbjct: 579 RKMLEEGVEPNE 590



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 188/414 (45%), Gaps = 75/414 (18%)

Query: 146 SRNGQLDRA----LMYFREMKSAGLVPD------------------------------NV 171
           +R+  LD      L  FREM S G+ PD                               +
Sbjct: 141 ARDATLDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGI 200

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEK-------GCVMDVVTYNTILNGLCRAKMLTEA 224
             +I+      + F+ E  K +  ML K       GC+ + VTYN ++ GL R   L EA
Sbjct: 201 EPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEA 260

Query: 225 DDLFN----------------------------------EMLERGVFPDFYTFTTLIHGH 250
            +L                                    EM   G+ P   T+  +IHG 
Sbjct: 261 AELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGL 320

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
            + G +  A   F  M    + PD++TYN+L++G+CK G +++A  L+ D+    ++P  
Sbjct: 321 LQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTV 380

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y I I+GYC +G + EA  L  EM  +G  P + +   ++KG       + A EF  +
Sbjct: 381 LTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDE 440

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+S+G+ PD  +YNT I   +   ++ +A  L   +  +G+  D +TYN+++ G C+ G 
Sbjct: 441 MLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGN 500

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + D++ +  +M+  GL PD  TYT LI+ H  +  L+EA +  + M+  G +P 
Sbjct: 501 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 554


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  287 bits (735), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 254/485 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +L K+ K+D    F   M  KG+ PD  T+N L+NA C  G  + A  L+  M   G
Sbjct: 146 VLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESG 205

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TYN+L+N  CKKGR   A +++D M   G+  D  TYN  +   CR    ++  
Sbjct: 206 VYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGY 265

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R  V P+ ++++TLI  F R G+++ A   F EM    L+P+++ Y  +I G+
Sbjct: 266 LLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGH 325

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EAL++ D M+  G   + VTY  +LNGL +         +   M   GV    
Sbjct: 326 CTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSH 385

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++T +I G CK+G + +A+ L D M + S+ PD+VT++ LI+GF +VG++  A ++   
Sbjct: 386 ISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCK 445

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + PN I Y  LI  YC MG++ EA   +  M   G      +CN ++  +CR G 
Sbjct: 446 MYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGK 505

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A+ F++ M   G+DP+S++++ +ING+    +  KAF++  KM + G  P + TY  
Sbjct: 506 LEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGG 565

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C  G ++++     R+       D   + T +       NL +A    +EM+   
Sbjct: 566 LLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTND 625

Query: 481 FVPDD 485
           F+PD+
Sbjct: 626 FLPDN 630



 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 274/520 (52%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALC+  K  +A   L +ME+ GVYP  VTYNTL+N YC++G  + A QL++ M+ KG
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKG 240

Query: 61  LK-----------------------------------PGVFTYNSLINGLCKKGRCDRAK 85
           +                                    P   TYN+LI+G  ++G+ + A 
Sbjct: 241 IGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVAT 300

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +V DEM    L P++ TYNTL+   C   N+ EA  +   M   G+ P+ V++  L+   
Sbjct: 301 KVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGL 360

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +N +          M+  G+   ++ YT +I+G C+NG + EA+++ D+ML+     DV
Sbjct: 361 YKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDV 420

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT++ ++NG  R   +  A ++  +M + G+ P+   ++TLI+ +CK G + +ALN + +
Sbjct: 421 VTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAV 480

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M       D  T N L+  FC+ G++E+A      M    + PN +++  +INGY + G 
Sbjct: 481 MNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGD 540

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +AF ++ +M   G  P+L +   ++KG C  G  ++A +F  ++       D++ +NT
Sbjct: 541 ALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNT 600

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
            +    R  N+  A AL+++M     +PD  TY  ++ G C++G++  + L+  + IEKG
Sbjct: 601 KLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKG 660

Query: 446 -LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            L+P+ + YT+L++G +   + + A    +EML +   PD
Sbjct: 661 LLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPD 700



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 143/481 (29%), Positives = 250/481 (51%), Gaps = 1/481 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   +  KI++AK  +C+M + G+ P+ + Y+TLI  YC+ G+L+EA      M+  G
Sbjct: 426 LINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSG 485

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                FT N L+   C+ G+ + A+  ++ M +MGL P++ T++ ++       +  +A 
Sbjct: 486 HVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAF 545

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M+  G  P + ++  L+      G ++ AL +F  ++      DNV++   +   
Sbjct: 546 SVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTST 605

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-PD 239
           CR+G + +A+ + +EM+    + D  TY  ++ GLC+   +  A  L  + +E+G+  P+
Sbjct: 606 CRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPN 665

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +T+L+ G  K G+   AL +F+ M  K ++PD V +N +ID + + G+  K N + +
Sbjct: 666 PAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILS 725

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M S+ +  N  +Y IL++GY     +   F L+ +M+  G  P   S +++I GYC+S 
Sbjct: 726 TMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSK 785

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A + L  +  EG   D  ++N LI  F     M KAF LV +M    ++P+V TYN
Sbjct: 786 SFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYN 845

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +  G  R    H +  +L  ++E G  P    Y TLING     N+K A +  DEM   
Sbjct: 846 ALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTL 905

Query: 480 G 480
           G
Sbjct: 906 G 906



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 244/486 (50%), Gaps = 3/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K+ +       L  M   GV    ++Y  +I+  C+ G LEEA QL++ M    
Sbjct: 356 LLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVS 415

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T++ LING  + G+ + AKE++ +M + GL P+   Y+TL+   C+   + EA 
Sbjct: 416 VNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEAL 475

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  M+  G   D  + + L+  F R G+L+ A  +   M   GL P++V +  IINGY
Sbjct: 476 NAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGY 535

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G  L+A  + D+M   G    + TY  +L GLC    + EA   F+ +       D 
Sbjct: 536 GNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDN 595

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F T +   C+ GN++ A+ L + M      PD  TY  LI G CK G++  A  L   
Sbjct: 596 VIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGK 655

Query: 301 MISRKI-SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            I + + SPN   Y  L++G    GH   A  ++ EM+ K ++P  V+ N II  Y R G
Sbjct: 656 AIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKG 715

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             SK ++ LS M S+ +  +  +YN L++G+ +   M + F L   M   G +PD  +++
Sbjct: 716 KTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWH 775

Query: 420 VILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            ++ G+C Q +  D  + + R I  +G   DR T+  LI     +N +K+AF    +M Q
Sbjct: 776 SLILGYC-QSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQ 834

Query: 479 RGFVPD 484
              +P+
Sbjct: 835 FMVIPN 840



 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 228/462 (49%), Gaps = 4/462 (0%)

Query: 27  YP----DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           YP    +   ++ LI    R   + +A Q    M  +GL P V+T N ++  L K+ + D
Sbjct: 98  YPICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVD 157

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
                   ML  G+ PD AT+N LL   C +     A  +  +M   GV P  V+++TL+
Sbjct: 158 MFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLL 217

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             + + G+   A      M S G+  D   Y + I+  CR+    +   +   M      
Sbjct: 218 NWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVY 277

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            + +TYNT+++G  R   +  A  +F+EM    + P+  T+ TLI GHC  GN+ +AL L
Sbjct: 278 PNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRL 337

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            D+M    ++P+ VTY  L++G  K  E    + +   M    +  ++ISY  +I+G C 
Sbjct: 338 MDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCK 397

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G + EA +L  +M+   + P +V+ + +I G+ R G  + A E + KM   G+ P+ I 
Sbjct: 398 NGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGIL 457

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y+TLI  + +   + +A    + M + G V D  T NV++  FCR G++ ++E  +  M 
Sbjct: 458 YSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMS 517

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             GL+P+  T+  +ING+ +  +  +AF   D+M   G  P 
Sbjct: 518 RMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPS 559



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 226/465 (48%), Gaps = 1/465 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  LC    I+ A  F   +       D V +NT + + CR G L +A  L+N M    
Sbjct: 566  LLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTND 625

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL-SPDTATYNTLLVESCRKENMSEA 119
              P  FTY +LI GLCKKG+   A  +  + ++ GL SP+ A Y +L+    +  +   A
Sbjct: 626  FLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAA 685

Query: 120  EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
              IF EM  + V PD V+F+ +I  +SR G+  +       MKS  L  +   Y I+++G
Sbjct: 686  LYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHG 745

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            Y +   +     +  +M+  G + D  ++++++ G C++K    A  +   +   G   D
Sbjct: 746  YAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVID 805

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             +TF  LI   C+   M KA  L   M Q  + P++ TYN L +G  +  +  KA+++  
Sbjct: 806  RFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQ 865

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             ++     P    Y  LING C +G++  A +L  EM   GI    V+ + I++G   S 
Sbjct: 866  VLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSK 925

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
                A   L  M+   + P   ++ TL++ + +E N+ KA  L S ME+  +  DV+ YN
Sbjct: 926  KIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYN 985

Query: 420  VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            V+++G C  G +  +  +   M ++ L P+ S Y  LI+   + N
Sbjct: 986  VLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGN 1030



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 241/522 (46%), Gaps = 36/522 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V   C+  K++ A+ F+  M + G+ P++VT++ +IN Y   G   +AF + + M+  G
Sbjct: 496  LVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFG 555

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P +FTY  L+ GLC  G  + A +    +  +  + D   +NT L  +CR  N+S+A 
Sbjct: 556  HFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAI 615

Query: 121  EIFCEMSRRGVAPDIVSFSTLI----------------------GIFSRN---------- 148
             +  EM      PD  +++ LI                      G+ S N          
Sbjct: 616  ALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDG 675

Query: 149  ----GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
                G    AL  F EM +  + PD V + +II+ Y R G   +   +   M  K    +
Sbjct: 676  LLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFN 735

Query: 205  VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            + TYN +L+G  +   +     L+ +M+  G  PD +++ +LI G+C+  + + A+ +  
Sbjct: 736  LATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILR 795

Query: 265  IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
             +T +    D  T+N LI  FC+  EM+KA +L   M    + PN  +Y  L NG     
Sbjct: 796  WITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTS 855

Query: 325  HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               +A R+   ++  G  PT     T+I G CR G+   A +   +M + G+   +++ +
Sbjct: 856  DFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMS 915

Query: 385  TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             ++ G    + ++ A  ++  M    ++P V T+  ++  +C++  +  +  +   M   
Sbjct: 916  AIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHC 975

Query: 445  GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +  D   Y  LI+G  +  +++ AF+ ++EM QR   P+ +
Sbjct: 976  HVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTS 1017



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 214/438 (48%), Gaps = 1/438 (0%)

Query: 2    VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
            + + C+   +  A   + EM      PD  TY  LI   C++G +  A  L      KGL
Sbjct: 602  LTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGL 661

Query: 62   -KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P    Y SL++GL K G    A  + +EML   + PDT  +N ++ +  RK   S+  
Sbjct: 662  LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVN 721

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +I   M  + +  ++ +++ L+  +++   + R  M +++M   G +PD   +  +I GY
Sbjct: 722  DILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGY 781

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C++     A+K+   +  +G V+D  T+N ++   C    + +A +L  +M +  V P+ 
Sbjct: 782  CQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNV 841

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T+  L +G  +  + +KA  +  ++ +    P    Y TLI+G C+VG ++ A KL  +
Sbjct: 842  DTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDE 901

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M +  IS + ++   ++ G  +   +  A  +   M+   I PT+ +  T++  YC+  +
Sbjct: 902  MKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +KA E  S M    V  D ++YN LI+G     +++ AF L  +M+ + L P+   Y V
Sbjct: 962  VAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIV 1021

Query: 421  ILTGFCRQGRMHDSELIL 438
            ++  FC      +SE +L
Sbjct: 1022 LIDSFCAGNYQIESEKLL 1039



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 122/245 (49%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            F  LI    ++  +  A+  F +M  + + P + T N ++    K  +++     +  M
Sbjct: 107 VFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM 166

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +++ I P+  ++ IL+N  C  G    A  L  +M   G+ PT V+ NT++  YC+ G  
Sbjct: 167 LAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A + +  M S+G+  D  +YN  I+   R+    K + L+ +M    + P+ ITYN +
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTL 286

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           ++GF R+G++  +  +   M    L P+  TY TLI GH +  N+ EA R  D M+  G 
Sbjct: 287 ISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGL 346

Query: 482 VPDDA 486
            P++ 
Sbjct: 347 RPNEV 351



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 146/306 (47%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++   K H +    M   +M + G  PD  ++++LI  YC+    + A +++  ++ +G
Sbjct: 742  LLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEG 801

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 FT+N LI   C++    +A E++ +M Q  + P+  TYN L     R  +  +A 
Sbjct: 802  HVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAH 861

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +   +   G  P    + TLI    R G +  A+    EMK+ G+   NV  + I+ G 
Sbjct: 862  RVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGL 921

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              +  +  A+ + D MLE   +  V T+ T+++  C+   + +A +L + M    V  D 
Sbjct: 922  ANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDV 981

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
              +  LI G C +G++  A  L++ M Q+ + P+   Y  LID FC      ++ KL  D
Sbjct: 982  VAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRD 1041

Query: 301  MISRKI 306
            +  R++
Sbjct: 1042 IQDREL 1047


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  287 bits (734), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 153/457 (33%), Positives = 251/457 (54%), Gaps = 1/457 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  +  ++ I  A     EM +KG++ D  TY  LIN  C+      A +L   M G  
Sbjct: 83  LVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGN- 141

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  VFTY  +I+ LCK G    A ++  EM+  G+ PD   Y++L+   CR   + EA 
Sbjct: 142 CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 201

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E F EM  RG++ D+ ++++LI   SR G       +   M   G  PD   +TI+I+G 
Sbjct: 202 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 261

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA ++ + M  KG   D++TYNT++NGLC    L +A  LF  + +RG+  + 
Sbjct: 262 CKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 321

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  LI+G+CKD  +++A  LF+ M  K +KP  VTYNTLI   C+ G +  A KL+ +
Sbjct: 322 FSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +        +Y +L++G C  GH+ EA  L+  +     KP +   + ++ G CR+G 
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +   ++   G++PD+I+YN LING   +  + +A  L+ +ME +G +PD IT+NV
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 501

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           I+    ++  +H++  +L  M  +  +PD +  + L+
Sbjct: 502 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 155/463 (33%), Positives = 247/463 (53%), Gaps = 36/463 (7%)

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G +P   T  +L+ G+  +     A ++ DEM + GL  D  TY  L+   C+      
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A ++  +M +     D+ ++  +I    ++G    AL  F EM  AG++PD V+Y+ +++
Sbjct: 131 AIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G CR G + EAL+   EM  +G   DV TYN++++GL RA +  E     N M++RG  P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D +TFT LI G CK+G + +A  + ++M  K  +PDI+TYNTL++G C VG++E A KL+
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             +  R I  N  SY ILINGYC    + EAFRL+ EM  KG+KP+ V+ NT+I   C+S
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369

Query: 359 GDASKADEFLSKM------------------------VSEGVD-----------PDSISY 383
           G    A +   +M                        + E +D           P+   +
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVF 429

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + L++G  R   +++A+    ++   GL PD I YN+++ G C +G + ++  +LW+M E
Sbjct: 430 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 489

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           KG  PD  T+  +I   + +N + EA +  +EM  R F PD+A
Sbjct: 490 KGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 532


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 153/464 (32%), Positives = 259/464 (55%), Gaps = 6/464 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC  +++         + ++G  P+ VTYNTLI   C E  + EA +L   M   G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML------QMGLSPDTATYNTLLVESCRKE 114
             P V TY +LI GLC  G  + A ++  EML      ++   P+  TYN ++   C+  
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              EA+++F EM  +G+ P I+S+++LI  F   G+ + +     EM   GL PD V + 
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFN 289

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+  C+ G V+EA K+   M+E G V D+VTYN+++ G C    L  A +LF  M  +
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  PD  ++  LI+G+ K   + +A+ L++ M     +P+++TY++L+ G    G+++ A
Sbjct: 350 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            KL++ M +  I+ N  +YGI ++G C    + EA +L+ E+     K  + + N +I G
Sbjct: 410 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 469

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C++G    A E   K+ +EG +P+ ++Y  +I+GF RE  +DKA  L+ KME  G  PD
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           +ITYN ++ GF    ++ +   +L RM +K ++PD  T + +++
Sbjct: 530 IITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVD 573



 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 156/498 (31%), Positives = 256/498 (51%), Gaps = 41/498 (8%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   ++N L++   +     + F L N M   GL     T N L+N LC   R       
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              +L+ G SP+  TYNTL+   C +  +SEA  +F  M + G  PD+V++ TLI     
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 148 NGQLDRALMYFREMKS------AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
            G ++ AL   +EM +          P+ + Y II++G C+ G   EA ++ +EM  +G 
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           +  +++YN++++G C A    E+  L +EML++G+ PD  TF  LI   CK+G + +A  
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L  +M +  I PD+VTYN+LI+GFC VG++  A +L+  M S+   P+ ISY +LINGY 
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 366

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
               V EA +L+ EM+  G +P +++ ++++KG   +G    A +  S M + G+  +S 
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 426

Query: 382 SY-----------------------------------NTLINGFVREENMDKAFALVSKM 406
           +Y                                   N LI+G  +   ++ A+ L  K+
Sbjct: 427 TYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 486

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
            N+G  P+V+TY +++ GFCR+G++  + +++ +M   G  PD  TY TL+ G    N L
Sbjct: 487 SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 546

Query: 467 KEAFRFHDEMLQRGFVPD 484
           +E  +    M Q+   PD
Sbjct: 547 EEVVQLLHRMAQKDVSPD 564



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 232/450 (51%), Gaps = 41/450 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLI----------------------- 37
           ++  LC +H+I  A      M++ G  PD VTY TLI                       
Sbjct: 145 LIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDI 204

Query: 38  ------------------NAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
                             +  C+ G  +EA QL   M  +G+ P + +YNSLI+G C  G
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAG 264

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + + +K +LDEML  GL PD  T+N L+   C++  + EA+++   M   G+ PD+V+++
Sbjct: 265 KWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYN 324

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           +LI  F   G L+ A   F  M S G  PD + Y ++INGY +   V EA+K+ +EML  
Sbjct: 325 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 384

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   +V+TY+++L G+  A  + +A  LF+ M   G+  + YT+   + G CK+  + +A
Sbjct: 385 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 444

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + LF  +   + K +I   N LIDG CK G++E A +L+  + +    PN ++Y I+I+G
Sbjct: 445 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 504

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C  G V +A  L  +M   G  P +++ NT+++G+  S    +  + L +M  + V PD
Sbjct: 505 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 564

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQ 409
           +I+ + +++   ++E   +   L+ +   Q
Sbjct: 565 AITCSIVVDMLSKDEKYQECLHLLPRFPIQ 594



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 204/396 (51%), Gaps = 8/396 (2%)

Query: 98  PDTATYNTLLVESCRKENMS--EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           P         +  C+  N++   A   F  M R    P + SF+ L+   ++     +  
Sbjct: 30  PSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVF 89

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
             + +M+ +GL  D     I++N  C    + E       +L +G   ++VTYNT++ GL
Sbjct: 90  SLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGL 149

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT------QK 269
           C    ++EA  LF  M + G  PD  T+ TLI G C  GN+N AL L   M       + 
Sbjct: 150 CMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEI 209

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
           + KP+++TYN ++DG CKVG  ++A +L+ +M ++ + P+ ISY  LI+G+C  G   E+
Sbjct: 210 NCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEES 269

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            RL  EM+ +G++P +V+ N +I   C+ G   +A + L  M+  G+ PD ++YN+LI G
Sbjct: 270 KRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEG 329

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           F    +++ A  L   M ++G  PDVI+YNV++ G+ +  ++ ++  +   M+  G  P+
Sbjct: 330 FCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPN 389

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             TY +L+ G      + +A +    M   G   + 
Sbjct: 390 VITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENS 425


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 166/527 (31%), Positives = 270/527 (51%), Gaps = 43/527 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D+A+  L +M   G  P+ VTY  LI+  C+     +A Q +  M   G
Sbjct: 16  LIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TYNSLI+GLC   R D A  VL E+++ G +P+  TY+TL++ +CR+  + +A 
Sbjct: 76  CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQAR 135

Query: 121 EI----------------------FC---------------EMSRRGVAPDIVSFSTLIG 143
            +                      FC               EM   G  PD+V+++T I 
Sbjct: 136 GLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFIS 195

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
              + G+LD+ L    EM   G+ PD V +  II+G C+   + +A ++   MLE+GCV 
Sbjct: 196 GLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVP 255

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEM--LERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           D +TY+ +L+ L RA  L   D++   M  ++ G   + YT    I   C+ G    A N
Sbjct: 256 DSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKN 315

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI-SRKISPNYISYGILINGY 320
           +   M +    P++++YN +IDG CK G ++ A KL   M+ S    P+ I +  LI+G+
Sbjct: 316 ILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGF 375

Query: 321 CSMGHVTEAFRLWYEMVGKGI-KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           C  G +++A +L  EM  K I  P +V+ NT+I G  + G   +A   L +M + G  P+
Sbjct: 376 CKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPN 435

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            ++Y  LING+ +    ++A +L  +M  +G  PD+ITYN +L+ F + G M  +E +  
Sbjct: 436 VVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQ 495

Query: 440 RMIEKG--LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  K    +PD  TY  LI+G+    + ++      EM  RG+  D
Sbjct: 496 QLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCD 542



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 159/470 (33%), Positives = 244/470 (51%), Gaps = 6/470 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   G     VTY TLI+  C+ G L+ A  L+  M+  G  P V TY +LI+GLCK  R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A + +  ML+ G  PD  TYN+L+   C    M +A  +  E+ R G AP+ +++ST
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR--DEMLE 198
           L+    R  +LD+A    REM   G V + V+Y   I G+C         + R  DEM+E
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G + DVVTYNT ++GLC+A  L +  ++  EM   G+ PD  TF ++I G CK   ++ 
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP--NYISYGIL 316
           A  +F  M ++   PD +TY+ ++D   +   ++  +++   M + K        ++   
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG- 375
           I   C  G    A  +   M+  G  P L+S N +I G C+SG+   A +   KM+  G 
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 360

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGL-VPDVITYNVILTGFCRQGRMHDS 434
             PD I +NTLI+GF +   + +A  L+ +M+ + + VPDV+TYN ++ G  + G +  +
Sbjct: 361 CKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQA 420

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +L+L  M   G  P+  TY  LING+      +EA    DEM  +G  PD
Sbjct: 421 KLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPD 470



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 157/529 (29%), Positives = 272/529 (51%), Gaps = 46/529 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLM------- 53
           +++ LC  +++D A + L E+ + G  P+ +TY+TL+   CR   L++A  L+       
Sbjct: 86  LIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRG 145

Query: 54  ------------------------------NSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
                                         + M   G  P V TYN+ I+GLCK G+ D+
Sbjct: 146 SVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDK 205

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
             E+L+EM + G+ PD  T+ +++   C+   + +A ++F  M  RG  PD +++S ++ 
Sbjct: 206 GLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLD 265

Query: 144 IFSRNGQLD---RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
             SR  +LD     L + + MK AG V +   +   I   CR+G    A  +   M+E G
Sbjct: 266 NLSRANRLDTVDEVLEHMQAMK-AGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 324

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-PDFYTFTTLIHGHCKDGNMNKA 259
            + ++++YN +++GLC++  + +A  L  +ML+ G   PD   F TLI G CK G +++A
Sbjct: 325 SLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 384

Query: 260 LNLFDIMTQKSI-KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
             L   M  K+I  PD+VTYNTLIDG  K G +++A  L  +M +    PN ++Y  LIN
Sbjct: 385 HQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALIN 444

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG--V 376
           GY   G   EA  L+ EM  KG  P +++ NT++  + ++G  SKA+    ++ ++    
Sbjct: 445 GYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYC 504

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD+I+Y  LI+G+ R E+ ++   L+ +M  +G   D  TYNV++        +    L
Sbjct: 505 SPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKAL 564

Query: 437 ILW-RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++ +M+++   P  S + +L+   +   ++  A     EM ++G + D
Sbjct: 565 AVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVD 613



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/444 (31%), Positives = 235/444 (52%), Gaps = 7/444 (1%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM + G  PD VTYNT I+  C+ G L++  +++  M   G+ P V T+ S+I+GLCK  
Sbjct: 177 EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS--RRGVAPDIVS 137
           R D A +V   ML+ G  PD+ TY+ +L    R   +   +E+   M   + G   ++ +
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYT 296

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
            +  IG   R+G+   A      M  +G +P+ + Y  +I+G C++G V +A K+  +ML
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356

Query: 198 EKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGV-FPDFYTFTTLIHGHCKDGN 255
           + GC   DV+ +NT+++G C+A  L++A  L  EM  + +  PD  T+ TLI G  K G+
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGS 416

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           + +A  L   M     KP++VTY  LI+G+ K G  E+A  L+ +M ++   P+ I+Y  
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT 476

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKG--IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
           +++ +   G +++A  ++ ++  K     P  ++   +I GYCR+ D  +    L +M +
Sbjct: 477 VLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTA 536

Query: 374 EGVDPDSISYNTLINGFVR-EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            G   DS +YN LI      EE   KA A+  +M +Q  VP    +N ++  F R G ++
Sbjct: 537 RGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVN 596

Query: 433 DSELILWRMIEKGLNPDRSTYTTL 456
            +  ++  M EKG   D S    L
Sbjct: 597 SARSMVQEMNEKGHLVDASNLEAL 620



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 185/367 (50%), Gaps = 5/367 (1%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M+  G    +V+++TLI    ++G LD A    ++M  AG  P+ V YT +I+G C+   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
             +A++    ML  GC  D+VTYN++++GLC A  + +A  +  E++  G  P+  T++T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC--KVGEMEKANKLWADMIS 303
           L+  +C+   +++A  L   M  +    ++V Y   I GFC  +        +   +MI 
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
               P+ ++Y   I+G C  G + +   +  EM   GI P +V+  +II G C++     
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME--NQGLVPDVITYNVI 421
           A +    M+  G  PDS++Y+ +++   R   +D    ++  M+    G V +V T+N  
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +   CR G+   ++ IL  MIE G  P+  +Y  +I+G     N+ +A++   +ML  G 
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 360

Query: 482 V-PDDAF 487
             PD  F
Sbjct: 361 CKPDVIF 367


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 264/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D       +M++ G+  +  TYN LIN +CR   +  A  L+  M   G
Sbjct: 16  LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M++MG  PDT T+ TL+         SEA 
Sbjct: 76  YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M +RG  P++V++  ++    + G +D A     +M++A +  D V++  II+  
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +AL +  EM  KG   +VVTY+++++ LC     ++A  L ++M+E+ + P+ 
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI    K+G   +A  L D M ++SI PDI TYN+LI+GFC    ++KA +++  
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+   P+  +Y  LI G+C    V +   L+ EM  +G+    V+  T+I+G    GD
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   +MVS+GV PD ++Y+ L++G      ++KA  +   M+   +  D+  Y  
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ P+  TY T+I+G  S+  L+EA+    +M + G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495

Query: 481 FVPD 484
            +PD
Sbjct: 496 PLPD 499



 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 255/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  +I  A   L +M + G  P  VT ++L+N YC    + +A  L++ M   G
Sbjct: 51  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+ +LI+GL    +   A  ++D M+Q G  P+  TY  ++   C++ ++  A 
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M    +  D+V F+T+I    +   +D AL  F+EM++ G+ P+ V Y+ +I+  
Sbjct: 171 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++  +M+EK    ++VT+N +++   +     EA+ L ++M++R + PD 
Sbjct: 231 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +LI+G C    ++KA  +F+ M  K   PD+ TYNTLI GFCK   +E   +L+ +
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  + ++Y  LI G    G    A +++ +MV  G+ P +++ + ++ G C +G 
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E    M    +  D   Y T+I G  +   +D  + L   +  +G+ P+V+TYN 
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G C +  + ++  +L +M E G  PD  TY TLI  H+   +   +     EM    
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530

Query: 481 FVPD 484
           FV D
Sbjct: 531 FVGD 534



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 149/280 (53%)

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +  +N +L+ + + K       L  +M   G+  + YT+  LI+  C+   ++ AL L  
Sbjct: 10  IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +   +P IVT ++L++G+C    +  A  L   M+     P+ I++  LI+G     
Sbjct: 70  KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
             +EA  L   MV +G +P LV+   ++ G C+ GD   A   L+KM +  ++ D + +N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           T+I+   +  ++D A  L  +ME +G+ P+V+TY+ +++  C  GR  D+  +L  MIEK
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +NP+  T+  LI+  V +    EA + HD+M++R   PD
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 4/232 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +++       EM  +G+  DTVTY TLI     +G  + A ++   M   G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY+ L++GLC  G+ ++A EV D M +  +  D   Y T++   C+   + +  
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++FC +S +GV P++V+++T+I        L  A    ++MK  G +PD+  Y  +I  +
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
            R+G    + ++  EM     V D  T   + N L   ++    D  F +ML
Sbjct: 511 LRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL----DKSFLDML 558


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 148/457 (32%), Positives = 250/457 (54%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +  ++ +  +      A  L   M  KG++P + T + LIN  C  G+   +  V
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  P+T    TL+   C K  + ++     ++  +G   + VS+ TL+    +
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+   A+   R ++     PD V+Y  II+G C++  V EA     EM  +G   DV+T
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T++ G C A  L  A  L NEM  + + PD YT+T LI   CK+G + +A NL  +MT
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ +KP++VTY+TL+DG+C VGE+  A +++  M+  +++P+  SY I+ING C    V 
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L  EM+ K + P  V+ N++I G C+SG  + A + + ++   G   D I+Y +L+
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  + +N+DKA AL  KM+ +G+ P+  TY  ++ G C+  R+ +++ +   ++ KG  
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCC 549

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D  TY  +I G   +  L EA     +M   G +PD
Sbjct: 550 IDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPD 586



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 250/482 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +L K     +A     +ME KG+ PD VT + LIN +C  G +  +F ++  +   G
Sbjct: 138 ILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 197

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P      +L+ GLC KG   ++    D+++  G   +  +Y TLL   C+      A 
Sbjct: 198 YQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAI 257

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   +  R   PD+V ++T+I    ++  ++ A  ++ EM S G+ PD + Y+ +I G+
Sbjct: 258 KLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGF 317

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G ++ A  + +EM  K    DV TY  +++ LC+   L EA +L   M + GV P+ 
Sbjct: 318 CLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNV 377

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TL+ G+C  G ++ A  +F  M Q  + P + +YN +I+G CK   +++A  L  +
Sbjct: 378 VTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLRE 437

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + PN ++Y  LI+G C  G +T A  L  E+  +G    +++  +++ G C++ +
Sbjct: 438 MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQN 497

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA     KM   G+ P+  +Y  LI+G  +   +  A  L   +  +G   DV TYNV
Sbjct: 498 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNV 557

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G + ++  +  +M + G  PD  T+  +I     ++   +A +   EM+ +G
Sbjct: 558 MIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617

Query: 481 FV 482
            +
Sbjct: 618 LL 619



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 173/375 (46%), Gaps = 18/375 (4%)

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           + +G+ P++V+ S LI      GQ+  +     ++   G  P+++  T ++ G  R    
Sbjct: 3   AAKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIK 62

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT-----------------EADDLFN 229
           L  + + D        +     ++I N        T                 +A   FN
Sbjct: 63  LPRM-IEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFN 121

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
            ML     P    F  ++    K  +   A++L   M  K I+PD+VT + LI+ FC +G
Sbjct: 122 GMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLG 181

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           +M  +  +   ++     PN I    L+ G C  G V ++     ++V +G +   VS  
Sbjct: 182 QMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYG 241

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           T++ G C+ G+   A + L  +      PD + YNT+I+G  +++ +++A+   ++M ++
Sbjct: 242 TLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSR 301

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+ PDVITY+ ++ GFC  G++  +  +L  M  K +NPD  TYT LI+    +  LKEA
Sbjct: 302 GIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEA 361

Query: 470 FRFHDEMLQRGFVPD 484
                 M + G  P+
Sbjct: 362 KNLLGVMTKEGVKPN 376


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 144/483 (29%), Positives = 266/483 (55%), Gaps = 3/483 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL--MNSMS 57
           ++  LC   + D A  +    M + G  PD ++Y+T++ + C +G  + A  +  M    
Sbjct: 144 LLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQ 203

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G G    V  Y+++++GL K+G+   A ++  EM Q G+ P+  TYN+++   C+   + 
Sbjct: 204 GGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVD 263

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A+ I  +M   GV PD V+++TLI  +S  GQ  +A+  F+EM S G++P+ V  +  +
Sbjct: 264 KAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFV 323

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
              C++G + EA +  D ML KG  +++++Y+T+L+G   A  L +  +LFN M+  G+ 
Sbjct: 324 AFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIV 383

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+ + F  L++G+ K G + +A+ +F+ M ++ + PD++TY  +I  FC++G M+ A   
Sbjct: 384 PNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDK 443

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  MI + + PN+  Y  LI G+C+ G + +A  L YE+  KG+ P ++S  ++I   C+
Sbjct: 444 FNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCK 503

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A      ++  G   D   + +LI+G+     M +AF +   M + G+ PD++T
Sbjct: 504 EGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVT 563

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y  ++ G C+ GR+ D  ++   ++ KG+ P   TY  +++G         A     EM+
Sbjct: 564 YGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMI 623

Query: 478 QRG 480
           + G
Sbjct: 624 ESG 626



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 261/487 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK   +D A+  L +M   GV PD VTYNTLI+ Y   G  ++A ++   M+ +G
Sbjct: 252 VIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRG 311

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T ++ +  LCK GR + A+E  D ML  G   +  +Y+TLL        + +  
Sbjct: 312 VIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMS 371

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M R G+ P+   F+ L+  +++ G +  A+  F +M+  GL PD + Y  +I+ +
Sbjct: 372 NLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAF 431

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A+   + M++KG   +   Y  ++ G C    L +A++L  E+  +G+ P  
Sbjct: 432 CRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCI 491

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +F +LI+  CK+G + +A  +FD++ +   K D+  + +LIDG+C +G+M +A ++   
Sbjct: 492 LSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDA 551

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I P+ ++YG L+NG C  G + +   L+ E++ KG+KPT  +   I+ G   +G 
Sbjct: 552 MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGR 611

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E   +M+  G+     +Y+ L+ G  R    ++A  +  K+    +  D++  N+
Sbjct: 612 TAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNI 671

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++   +  R  ++E +   + + GL P   TYT ++   + + +++EA      ML+ G
Sbjct: 672 MISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG 731

Query: 481 FVPDDAF 487
             P   F
Sbjct: 732 LSPTSHF 738



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 259/471 (54%), Gaps = 2/471 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYP-DTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++ ++C D +   A  +    ++Q G  P + V Y+T+++   +EG + EA  L + M+ 
Sbjct: 180 VLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQ 239

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G+ P V TYNS+I+ LCK    D+A+ +L +M+  G+ PD  TYNTL+          +
Sbjct: 240 QGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQ 299

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F EM+ RGV P+ V+ ST +    ++G+++ A  +F  M + G   + + Y+ +++
Sbjct: 300 AVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLH 359

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G +++   + + M+  G V +   +N ++NG  +  M+ EA  +F +M +RG+ P
Sbjct: 360 GYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNP 419

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+  +IH  C+ G+M+ A++ F+ M  K ++P+   Y  LI GFC  G++ KA +L 
Sbjct: 420 DVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELV 479

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            ++ ++ + P  +S+  LIN  C  G V EA R++  ++  G K  +    ++I GYC  
Sbjct: 480 YEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLI 539

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  S+A      MVS G++PD ++Y TL+NG  +   +D    L  ++ ++G+ P   TY
Sbjct: 540 GKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTY 599

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            +IL G    GR   ++ +   MIE G+     TY+ L+ G    N  +EA
Sbjct: 600 GIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEA 650



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 241/460 (52%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   TY+ LI+  CR   L+ AF     +  +G+K  V   +SL+ GLC   R D A +V
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 88  L-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG--VAPDIVSFSTLIGI 144
           L   M ++G  PD  +Y+T+L   C       A +I     ++G     ++V +ST++  
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             + G++  A   F EM   G+ P+ V Y  +I+  C+   V +A  +  +M+  G   D
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            VTYNT+++G        +A  +F EM  RGV P+  T +T +   CK G + +A   FD
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K  K +I++Y+TL+ G+   G +   + L+  M+   I PN   + IL+NGY   G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EA  ++ +M  +G+ P +++   +I  +CR G    A +  + M+ +GV+P+   Y 
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI GF    ++ KA  LV ++ N+GL P ++++  ++   C++GR+ +++ I   +I  
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRT 520

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G   D + +T+LI+G+     + EAFR HD M+  G  PD
Sbjct: 521 GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPD 560



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 229/457 (50%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           V  LCK  +I+ A+ F   M  KG   + ++Y+TL++ Y   G L +   L N M   G+
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P    +N L+NG  K G    A  + ++M + GL+PD  TY  ++   CR  +M +A +
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMD 442

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
            F  M  +GV P+   +  LI  F  +G L +A     E+++ GL P  + +  +IN  C
Sbjct: 443 KFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLC 502

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G V EA ++ D ++  G   DV  + ++++G C    ++EA  + + M+  G+ PD  
Sbjct: 503 KEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIV 562

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+ TL++G CK+G ++  L LF  +  K +KP   TY  ++DG    G    A +++ +M
Sbjct: 563 TYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEM 622

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           I   I+    +Y IL+ G C      EA  ++ ++    +K  +V  N +I    ++   
Sbjct: 623 IESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRR 682

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A+   + +   G+ P   +Y  ++   ++E ++++A  + S M   GL P     NVI
Sbjct: 683 EEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVI 742

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           +     +G +  + + + R+  K +  + ST + L++
Sbjct: 743 VRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLS 779



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 194/361 (53%), Gaps = 3/361 (0%)

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           R   P + ++S LI    R  +LD A  +F  +   G+  D ++ + ++ G C      E
Sbjct: 97  RVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDE 156

Query: 189 ALK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG--VFPDFYTFTT 245
           A+  +   M E GCV D ++Y+T+L  +C       A D+    +++G     +   ++T
Sbjct: 157 AVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYST 216

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           ++HG  K+G + +A +LF  MTQ+ + P++VTYN++I   CK   ++KA  +   M+   
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           + P+ ++Y  LI+GY ++G   +A R++ EM  +G+ P  V+C+T +   C+ G   +A 
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           EF   M+++G   + ISY+TL++G+     +     L + M   G+VP+   +N+++ G+
Sbjct: 337 EFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGY 396

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            + G + ++  I   M ++GLNPD  TY  +I+      ++ +A    + M+ +G  P+ 
Sbjct: 397 AKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNF 456

Query: 486 A 486
           A
Sbjct: 457 A 457



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 199/390 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN   K   +  A     +M+++G+ PD +TY  +I+A+CR G +++A    N M  KG
Sbjct: 392 LVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG 451

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P    Y  LI G C  G   +A+E++ E+   GL P   ++ +L+   C++  + EA+
Sbjct: 452 VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQ 511

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  + R G   D+  F++LI  +   G++  A      M S G+ PD V Y  ++NG 
Sbjct: 512 RIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGC 571

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG + + L +  E+L KG      TY  IL+GL  A     A ++F EM+E G+    
Sbjct: 572 CKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTI 631

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ L+ G C++    +A+ +F  +   ++K DIV  N +I    K    E+A  L+A 
Sbjct: 632 PTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFAS 691

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P   +Y I++      G V EA  ++  M+  G+ PT    N I++     G+
Sbjct: 692 IPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGE 751

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF 390
             KA  ++ ++  + +  ++ + + L++ F
Sbjct: 752 IVKAGIYMCRVDGKSILFEASTASMLLSLF 781



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 208/410 (50%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G+ P+   +N L+N Y + G + EA  +   M  +GL P V TY ++I+  C+ G 
Sbjct: 377 MVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGS 436

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A +  + M+  G+ P+ A Y  L+   C   ++ +AEE+  E+  +G+ P I+SF++
Sbjct: 437 MDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFAS 496

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    + G++  A   F  +   G   D  ++T +I+GYC  G + EA ++ D M+  G
Sbjct: 497 LINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D+VTY T++NG C+   + +   LF E+L +GV P  +T+  ++ G    G    A 
Sbjct: 557 IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            +F  M +  I   I TY+ L+ G C+    E+A  ++  + +  +  + +   I+I+  
Sbjct: 617 EMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKM 676

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
                  EA  L+  +   G+ PT+ +   +++   + G   +A+   S M+  G+ P S
Sbjct: 677 FKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTS 736

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
              N ++   + +  + KA   + +++ + ++ +  T +++L+ F  +G+
Sbjct: 737 HFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGK 786



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 70/150 (46%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+++  + A     ++    V  D V  N +I+   +    EEA  L  S+   G
Sbjct: 637 LLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYG 696

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY  ++  L K+G  + A+ V   ML+ GLSP +   N ++     K  + +A 
Sbjct: 697 LVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAG 756

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
              C +  + +  +  + S L+ +FS  G+
Sbjct: 757 IYMCRVDGKSILFEASTASMLLSLFSCKGK 786


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 252/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   ++  A     E  + G+ P  VTY  LI     EG  E+A++L   M   G
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHG 347

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    +N +I GL        A  +  EM   G+ PD  TYN L+   C++  + EA 
Sbjct: 348 LLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREAL 406

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +M+  GV P IV++ +L+  +  NG +D A+  + EM   G  P+ V YT ++ G+
Sbjct: 407 NLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                  +A  +  EM + G   +  TYNT++NGLC    + E  ++       G  P  
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA 526

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I+G  K G M  A  ++  M  K I P+IVTY + IDG+CK    + A K+  D
Sbjct: 527 MTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLND 586

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + P+  +Y  LI G+C  G+++ A ++   M+  G+ P +   N+ I GY     
Sbjct: 587 VRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKM 646

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A  F  KM+ EG+D D+ +Y TLI+GF ++ N+  A  L S+M  +G +PD IT+  
Sbjct: 647 MEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTA 706

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  G CR G + D+  +L  M    + P+   Y  LING++    L+EAFR HDEML+R 
Sbjct: 707 LTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERK 766

Query: 481 FVPDD 485
            +PDD
Sbjct: 767 IMPDD 771



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 245/453 (54%), Gaps = 2/453 (0%)

Query: 6   CKDHKIDSAKMFLC-EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           C +  +      LC +M   G+ P T  +N +I     +   ++A  L   M+  G+ P 
Sbjct: 327 CTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PD 385

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
            FTYN LI+ LC++ +   A  + ++M + G+ P   TY++LL+  C    M EA +++ 
Sbjct: 386 AFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYT 445

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM  +G  P++V+++TL+         D+A     EMK  G+  ++  Y  +ING C  G
Sbjct: 446 EMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVG 505

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V E  +M      +G V   +TYN+I+NG  +A M+  A  ++ +M  +G+ P+  T+T
Sbjct: 506 RVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYT 565

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           + I G+CK    + AL + + +  K ++PDI  YN+LI GFC+ G M  A ++   M+  
Sbjct: 566 SFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKD 625

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN   Y   I GY ++  + EA R + +M+ +GI     +  T+I G+ + G+ + A
Sbjct: 626 GLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFA 685

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            +  S+MV++G  PD I++  L +G  R  ++D A  L+ +M    + P+V+ YN+++ G
Sbjct: 686 LKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLING 745

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           + R G++ ++  +   M+E+ + PD +TY  L+
Sbjct: 746 YLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 254/486 (52%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K+   D A     EM    + PD    +  I + C+      A  ++  M   G
Sbjct: 183 VMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAG 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FT+NS+++ L K GR + A  + DE+L  G         TL+   C +  + +A 
Sbjct: 243 FVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKAL 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF E  R G+ P  V+++ LI   +  G  ++A    R+M+  GL+P    + ++I G 
Sbjct: 303 DIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +    +A+ +  EM + G + D  TYN +++ LC+ + + EA +L+ +M E GV P  
Sbjct: 363 LNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+  +C +G M++A+ L+  M  K   P++VTY TL+ G       +KA  L A+
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +S N  +Y  LING C +G V E   +      +G  PT ++ N+II G+ ++G 
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M ++G+ P+ ++Y + I+G+ +    D A  +++ +  +GL PD+  YN 
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC++G M  +  +L  M++ GL P+ S Y + I G+ +   ++EA RF+++M++ G
Sbjct: 602 LIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEG 661

Query: 481 FVPDDA 486
              D A
Sbjct: 662 IDLDTA 667



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 210/387 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  KI  A     +M + GV P  VTY++L+  YC  G ++EA +L   M GKG
Sbjct: 392 LIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKG 451

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY +L+ G   K   D+A  +L EM Q G+S +  TYNTL+   C    + E  
Sbjct: 452 FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVG 511

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+       G  P  ++++++I  F + G +  A   +++M + G+ P+ V YT  I+GY
Sbjct: 512 EMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGY 571

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+      ALKM +++  KG   D+  YN+++ G C+   ++ A  +   ML+ G+ P+ 
Sbjct: 572 CKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNI 631

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + + I G+     M +AL  ++ M ++ I  D  TY TLIDGF K G +  A KL+++
Sbjct: 632 SVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSE 691

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+++   P++I++  L +G C  G + +A +L  EM    I+P ++  N +I GY R+G 
Sbjct: 692 MVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGK 751

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLI 387
             +A     +M+   + PD  +Y+ L+
Sbjct: 752 LQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 220/437 (50%), Gaps = 15/437 (3%)

Query: 55  SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
           SM  +G+ P   +   L+    +      A  +L EM   G   D   ++ ++  +C KE
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVM-RACFKE 190

Query: 115 NM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
            M  +A  +F EM    + PD    S  I    +    +RAL+  R+M+ AG VP +  +
Sbjct: 191 GMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTF 250

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +++   + G + EAL ++DE+L  G  M VV   T+++G C  + + +A D+F E L 
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR 310

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+ P   T+T LI G  ++G   KA  L   M    + P    +N +I G         
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLN------ 364

Query: 294 ANKLWADMIS--RKIS----PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            +KLW D +S  ++++    P+  +Y ILI+  C    + EA  LW +M   G+KP +V+
Sbjct: 365 -DKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            ++++  YC +G   +A +  ++M  +G  P+ ++Y TL+ G + +   DKA+AL+++M+
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             G+  +  TYN ++ G C  GR+ +   +L R   +G  P   TY ++ING +    + 
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 468 EAFRFHDEMLQRGFVPD 484
            AF  + +M  +G  P+
Sbjct: 544 SAFAVYQQMCAKGIPPN 560



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 77/136 (56%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ++ A  F  +M ++G+  DT TY TLI+ + ++G +  A +L + M  KG  P   T+ +
Sbjct: 647 MEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTA 706

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L +GLC+ G  D A+++LDEM ++ + P+   YN L+    R   + EA  +  EM  R 
Sbjct: 707 LTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERK 766

Query: 131 VAPDIVSFSTLIGIFS 146
           + PD  ++  L+G+ S
Sbjct: 767 IMPDDTTYDILVGMKS 782


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 140/419 (33%), Positives = 238/419 (56%), Gaps = 1/419 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD++TY+TLIN +C+    ++A++L++ M  +G+ P    YN++I GLC  GR D A   
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M Q   +P   TY  L+   C+   +S+A  I  +M   G AP++V+++TLI  F +
Sbjct: 91  YRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +D A++ F +M      PD   Y I+I+GYC+     +  K+  EM++ GC  + +T
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT+++ L ++    +A +L   ML R   P  +TF  +I   CK G ++ A  LF +MT
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 269

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            +   PDI TYN +I G C+   ++ A +L   M      P+ ++Y  +++G C    V 
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 329

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA+ ++  +   G    +V+C+T+I G C+S     A++ L +M   G  PD ++Y  LI
Sbjct: 330 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 389

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           +GF + + +DK+ A  S+M ++G VP VITY++++   C+  R+ D  ++L  M+E+G+
Sbjct: 390 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 228/415 (54%), Gaps = 1/415 (0%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N L++   +K +   A ++    L    SPD+ TY+TL+   C+  +  +A  +  EM +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           RG+ P    ++T+I     NG++D AL+++R+M+     P  + YTI+++  C++  + +
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISD 120

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A  + ++M+E GC  +VVTYNT++NG C+   + EA  LFN+MLE    PD +T+  LI 
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G+CK         L   M +   +P+ +TYNTL+D   K G+   A  L   M+ R   P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           ++ ++ ++I+ +C +G +  A+ L+  M  +G  P + + N +I G CR+     A + L
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M   G  PD ++YN++++G  +   +D+A+ +   + N G   DV+T + ++ G C+ 
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            R+ D+E +L  M   G  PD   YT LI+G    + L ++  F  EML +G VP
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 415



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 238/447 (53%), Gaps = 1/447 (0%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N L++A+ R+   +EA+ L  +       P   TY++LING CK     +A  +LDEM +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            G+ P  A YNT++   C    +  A   + +M R   AP +++++ L+    ++ ++  
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISD 120

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A +   +M  AG  P+ V Y  +ING+C+ G + EA+ + ++MLE  C  DV TYN +++
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           G C+ +   +   L  EM++ G  P+F T+ TL+    K G    A NL  +M ++  KP
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
              T+N +ID FCKVG+++ A +L+  M  R   P+  +Y I+I+G C    + +A +L 
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
             M   G  P +V+ N+I+ G C++    +A E    + + G   D ++ +TLI+G  + 
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             +D A  L+ +ME  G  PDV+ Y +++ GFC+  ++  S      M++KG  P   TY
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + +I+       +++       ML+RG
Sbjct: 421 SIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 191/341 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK  +I  A + L +M + G  P+ VTYNTLIN +C+ G ++EA  L N M    
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 167

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTYN LI+G CK+ R     ++L EM++ G  P+  TYNTL+    +     +A 
Sbjct: 168 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 227

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M RR   P   +F+ +I +F + GQLD A   F+ M   G +PD   Y I+I+G 
Sbjct: 228 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 287

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   + +A ++ + M E GC  DVVTYN+I++GLC+A  + EA +++  +   G F D 
Sbjct: 288 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 347

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T +TLI G CK   ++ A  L   M +    PD+V Y  LI GFCK  +++K+   +++
Sbjct: 348 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 407

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           M+ +   P  I+Y I+I+  C    V +   L   M+ +G+
Sbjct: 408 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 210/411 (51%), Gaps = 1/411 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK      A   L EME++G+ P    YNT+I   C  G ++ A      M  + 
Sbjct: 39  LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RH 97

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  L++ LCK  R   A  +L++M++ G +P+  TYNTL+   C+  NM EA 
Sbjct: 98  CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 157

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M     +PD+ +++ LI  + +  +        +EM   G  P+ + Y  +++  
Sbjct: 158 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 217

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G  ++A  +   ML + C     T+N +++  C+   L  A +LF  M +RG  PD 
Sbjct: 218 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 277

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+  +I G C+   ++ A  L + MT+    PD+VTYN+++ G CK  ++++A +++  
Sbjct: 278 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 337

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +     + ++   LI+G C    + +A +L  EM   G  P +V+   +I G+C++  
Sbjct: 338 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 397

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
             K+  F S+M+ +G  P  I+Y+ +I+   +   +     L+  M  +G+
Sbjct: 398 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 34/171 (19%)

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           CN ++  + R   A +A +     +     PDSI+Y+TLINGF +  +  +A+ L+ +ME
Sbjct: 1   CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 408 NQGLV----------------------------------PDVITYNVILTGFCRQGRMHD 433
            +G+V                                  P VITY +++   C+  R+ D
Sbjct: 61  KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISD 120

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + LIL  MIE G  P+  TY TLING     N+ EA    ++ML+    PD
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 171



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 39/68 (57%)

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N +L+ F R+ +  ++  +    +    +PD  TY+TLING     + ++A+R  DEM +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 479 RGFVPDDA 486
           RG VP +A
Sbjct: 62  RGIVPHNA 69


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 154/485 (31%), Positives = 269/485 (55%), Gaps = 10/485 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG-VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V   CKD +++ A+  + EM++ G +  D V Y  +IN YC+ G +++A ++ N M   
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDA 353

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+   +F YN++INGLCK GR +  ++VL EM  +G+ PD  +YNTL+   CR+ +M +A
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M R G+A   ++++TL+  F     +D AL  +  M   G+ P+ +  + +++G
Sbjct: 414 FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG 473

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G   +AL +  E L +G   +V+T+NT++NGLC+   + EA++L + M E    PD
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL  G+CK G +  A +L + M      P +  +N+ I G     +  K N + +
Sbjct: 534 SLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHS 593

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M +R +SPN ++YG LI G+C  G++ EA  L++EMV  G+ P +  C+ ++  + + G
Sbjct: 594 EMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEG 653

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+  L K+V+  + P   S +T+         +DK   +V  + +       + +N
Sbjct: 654 KVDEANLVLQKLVNIDMIP-GCSISTI--------EIDKISHVVDTIADGNPHSANVMWN 704

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           VI+ G C+ GR+ D++ +   +  K   PD  TY++LI+G  +  ++ EAF   D ML  
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764

Query: 480 GFVPD 484
           G  P+
Sbjct: 765 GLTPN 769



 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 151/476 (31%), Positives = 259/476 (54%), Gaps = 1/476 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++ SA      M + G  P   + N L+N   + G    A  +   M   G+ P  FT  
Sbjct: 163 QLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVA 222

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            +    C+ GR  +A E ++EM  MGL  +   Y+ ++   C      +A  I   + R+
Sbjct: 223 IMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRK 282

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIINGYCRNGFVLE 188
           G++P++V+++ L+  + ++G+++ A    +EMK  G +V D V Y ++INGYC+ G + +
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A ++R+EM + G  +++  YNT++NGLC+   + E   +  EM + G+ PD Y++ TLI 
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G+C++G+M KA  +  +M +  +    +TYNTL+ GFC +  ++ A +LW  M+ R ++P
Sbjct: 403 GYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAP 462

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N IS   L++G    G   +A  LW E + +G+   +++ NT+I G C+ G  ++A+E L
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL 522

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M      PDS++Y TL +G+ +   +  A  L++KME+ G  P V  +N  +TG    
Sbjct: 523 DRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIA 582

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            + H    I   M  +GL+P+  TY  LI G   + NL EA   + EM+  G  P+
Sbjct: 583 KQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638



 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 277/550 (50%), Gaps = 69/550 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK  +++  +  L EME  G+ PD  +YNTLI+ YCREG + +AF++   M   G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 61  LKPGVFTYNSLINGLC-----------------------------------KKGRCDRAK 85
           L     TYN+L+ G C                                   K G+ ++A 
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  E L  GL+ +  T+NT++   C+   M+EAEE+   M      PD +++ TL   +
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + GQL  A     +M+  G  P   ++   I G+       +   +  EM  +G   ++
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY  ++ G C+   L EA +L+ EM+  G+ P+ +  + L+    K+G +++A    ++
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA----NL 660

Query: 266 MTQKSIKPDI------------------------------VTYNTLIDGFCKVGEMEKAN 295
           + QK +  D+                              V +N +I G CK G +  A 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            L+  + +++  P+  +Y  LI+G  + G + EAF L   M+  G+ P +++ N++I G 
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+SG  S+A    +K+ S+G+ P+ I+YNTLI+ + +E    +AF L  KM  +G+ P V
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTV 840

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           ITY++++ G C QG M ++  +L +MIE  ++P+  TY TLI+G++   N++E  + +DE
Sbjct: 841 ITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDE 900

Query: 476 MLQRGFVPDD 485
           M  RG +P +
Sbjct: 901 MHIRGLLPTN 910



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 254/484 (52%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +      A M   +M   GV PD  T   +  AYCR+G + +A + +  M G G
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  +  Y+++++  C  G  + A+ +L+ + + GLSP+  TY  L+   C+   M EAE
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  EM   G +  D V++  +I  + + G++D A     EM+ AG+  +  +Y  +ING
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G + E  K+  EM + G   D  +YNT+++G CR   + +A ++   M+  G+   
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL+ G C    ++ AL L+ +M ++ + P+ ++ +TL+DG  K G+ E+A  LW 
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           + ++R ++ N I++  +ING C +G + EA  L   M      P  ++  T+  GYC+ G
Sbjct: 489 ETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A   ++KM   G  P    +N+ I G    +   K   + S+M  +GL P+++TY 
Sbjct: 549 QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+C++G +H++  + + M+  G+NP+    + L++    +  + EA     +++  
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 480 GFVP 483
             +P
Sbjct: 669 DMIP 672



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 219/471 (46%), Gaps = 49/471 (10%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG--LSPDTA-----------TYNTLLV 108
           +P + ++  L++ L +  R   A+ +L  +      L P  A           +++ LL 
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
                  +S A  +F  M + G  P + S + L+    ++G    A M + +M+ AG++P
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           D     I+   YCR+G V +A++  +EM   G  +++V Y+ +++  C      +A  + 
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS-IKPDIVTYNTLIDGFCK 287
             +  +G+ P+  T+T L+ G+CKDG M +A  +   M +   I  D V Y  +I+G+C+
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G M+ A ++  +M    I  N   Y  +ING C +G + E  ++  EM   G++P   S
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            NT+I GYCR G   KA E    MV  G+   +++YNTL+ GF     +D A  L   M 
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456

Query: 408 NQGLVP-----------------------------------DVITYNVILTGFCRQGRMH 432
            +G+ P                                   +VIT+N ++ G C+ GRM 
Sbjct: 457 KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMA 516

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           ++E +L RM E    PD  TY TL +G+     L  A    ++M   GF P
Sbjct: 517 EAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAP 567



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 184/367 (50%), Gaps = 14/367 (3%)

Query: 133 PDIVSFSTLIGIFSRNGQLD--RALMYFREMKSAGLVP-----------DNVLYTIIING 179
           P +VS + L+ I +R  +    RAL+      +  L P             V + +++  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +   G +  AL + D M + GC   + + N +LN L ++     A  ++ +M   GV PD
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T   +   +C+DG + +A+   + M    ++ ++V Y+ ++D +C +G  E A ++  
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG-IKPTLVSCNTIIKGYCRS 358
            +  + +SPN ++Y +L+ GYC  G + EA R+  EM   G I    V+   +I GYC+ 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A    ++M   G+  +   YNT+ING  +   M++   ++ +ME+ G+ PD  +Y
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N ++ G+CR+G M  +  +   M+  GL     TY TL+ G  S + + +A R    ML+
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457

Query: 479 RGFVPDD 485
           RG  P++
Sbjct: 458 RGVAPNE 464



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 16/237 (6%)

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM-------------IS 303
           + AL+LF +   +   P +V++  L+    +      A  L + +             + 
Sbjct: 85  DAALHLFRLAPSR---PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVY 141

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R  + + +S+ +L+  +   G ++ A  ++  M   G +P+L SCN ++    +SGD   
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A     +M   GV PD  +   +   + R+  + +A   V +ME  GL  +++ Y+ ++ 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +C  G   D+  IL  +  KGL+P+  TYT L+ G+     ++EA R   EM + G
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 151/466 (32%), Positives = 252/466 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM ++ V P+ +TYNT+I+ + + G LE  F+L + M   GLKP   TYN L++GLC+ G
Sbjct: 88  EMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG 147

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R      +LDEM    + PD  TY+ L     R  +      +F +  + GV     + S
Sbjct: 148 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 207

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            L+    ++G++  A    + + +AGLVP  V+Y  +INGYC+ G +  A     +M  +
Sbjct: 208 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 267

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               D +TYN ++NGLC+A+ +T A DL  EM + GV P   TF TLI  + + G + K 
Sbjct: 268 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 327

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +   M +  +KP++V+Y ++++ FCK G++ +A  +  DM  + + PN   Y  +I+ 
Sbjct: 328 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 387

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y   G   +AF L  +M   GI P++V+ N +IKG C     S+A+E ++ + +  + PD
Sbjct: 388 YVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 447

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           ++SYNTLI+      N+DKA  L  +M   G+   V TY+ +++G    GR+++ E +  
Sbjct: 448 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ 507

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +M++  + P  + +  ++  +    N  +A     EMLQ+    DD
Sbjct: 508 KMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 553



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 232/460 (50%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  +YN +I    R G   +A ++ + M+ + + P   TYN++I+G  K G  +    +
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            D+M+  GL P+  TYN LL   CR   M E   +  EM+ + + PD  ++S L    SR
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           NG     L  F +    G+   +   +I++NG C++G V  A ++   ++  G V   V 
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++NG C+   L  A   F +M  R + PD  T+  LI+G CK   +  A +L   M 
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
              + P + T+NTLID + + G++EK   + ++M    + PN +SYG ++N +C  G + 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +M  K + P     N II  Y   G   +A   + KM S G+ P  ++YN LI
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G   +  + +A  +++ + N  L+PD ++YN +++  C +G +  +  +  RM + G+ 
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 480

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
               TY  LI+G      L E    + +M+Q   VP +A 
Sbjct: 481 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 520



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 228/449 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++   K   +++      +M   G+ P+ +TYN L++  CR G + E   L++ M+ + 
Sbjct: 104 MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 163

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTY+ L +GL + G       +  + L+ G++    T + LL   C+   +S AE
Sbjct: 164 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 223

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   +   G+ P  V ++TLI  + + G+L+ A   F +MKS  + PD++ Y  +ING 
Sbjct: 224 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 283

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A  +  EM + G    V T+NT+++   R   L +   + +EM E G+ P+ 
Sbjct: 284 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 343

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ ++++  CK+G + +A+ + D M  K + P+   YN +ID + + G  ++A  L   
Sbjct: 344 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 403

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  ISP+ ++Y +LI G C+   ++EA  +   +    + P  VS NT+I   C  G+
Sbjct: 404 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 463

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +   +M   G+     +Y+ LI+G      +++   L  KM    +VP    +N+
Sbjct: 464 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 523

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           ++  + + G    +E +   M++K  N D
Sbjct: 524 MVEAYSKYGNEIKAEDLRKEMLQKRNNHD 552



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 198/403 (49%), Gaps = 36/403 (8%)

Query: 117 SEAEEIFCEMSRRGVAPDI------------------------------------VSFST 140
           ++    F  ++  G  PD                                      S++ 
Sbjct: 9   ADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNV 68

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I    R G+   A+  F EM    ++P+++ Y  +I+G+ + G +    ++RD+M+  G
Sbjct: 69  VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 128

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              + +TYN +L+GLCRA  + E   L +EM  + + PD +T++ L  G  ++G+    L
Sbjct: 129 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 188

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +LF    +  +     T + L++G CK G++  A ++   +++  + P  + Y  LINGY
Sbjct: 189 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 248

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G +  AF  + +M  + IKP  ++ N +I G C++   + A + L +M   GV+P  
Sbjct: 249 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 308

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            ++NTLI+ + R   ++K F ++S+M+  GL P+V++Y  I+  FC+ G++ ++  IL  
Sbjct: 309 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 368

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           M  K + P+   Y  +I+ +V      +AF   ++M   G  P
Sbjct: 369 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 411



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 36/200 (18%)

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG------ 375
           S+G   +  R +  +   G +P   + N  ++    +GD  +A   L +M  +G      
Sbjct: 4   SLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNA 63

Query: 376 ------------------------------VDPDSISYNTLINGFVREENMDKAFALVSK 405
                                         V P+ I+YNT+I+G ++  +++  F L  +
Sbjct: 64  FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 123

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M   GL P+ ITYNV+L+G CR GRM ++  +L  M  + + PD  TY+ L +G     +
Sbjct: 124 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 183

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
            K       + L+ G    D
Sbjct: 184 SKAMLSLFGKYLKNGVTIGD 203


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 154/485 (31%), Positives = 269/485 (55%), Gaps = 10/485 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG-VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V   CKD +++ A+  + EM++ G +  D V Y  +IN YC+ G +++A ++ N M   
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDA 353

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+   +F YN++INGLCK GR +  ++VL EM  +G+ PD  +YNTL+   CR+ +M +A
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M R G+A   ++++TL+  F     +D AL  +  M   G+ P+ +  + +++G
Sbjct: 414 FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG 473

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G   +AL +  E L +G   +V+T+NT++NGLC+   + EA++L + M E    PD
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL  G+CK G +  A +L + M      P +  +N+ I G     +  K N + +
Sbjct: 534 SLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHS 593

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M +R +SPN ++YG LI G+C  G++ EA  L++EMV  G+ P +  C+ ++  + + G
Sbjct: 594 EMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEG 653

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+  L K+V+  + P   S +T+         +DK   +V  + +       + +N
Sbjct: 654 KVDEANLVLQKLVNIDMIP-GCSISTI--------EIDKISHVVDTIADGNPHSANVMWN 704

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           VI+ G C+ GR+ D++ +   +  K   PD  TY++LI+G  +  ++ EAF   D ML  
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764

Query: 480 GFVPD 484
           G  P+
Sbjct: 765 GLTPN 769



 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 149/465 (32%), Positives = 255/465 (54%), Gaps = 1/465 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G  P   + N L+N   + G    A  +   M   G+ P  FT   +    C+ GR
Sbjct: 174 MGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGR 233

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
             +A E ++EM  MGL  +   Y+ ++   C      +A  I   + R+G++P++V+++ 
Sbjct: 234 VAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTL 293

Query: 141 LIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           L+  + ++G+++ A    +EMK  G +V D V Y ++INGYC+ G + +A ++R+EM + 
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDA 353

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  +++  YNT++NGLC+   + E   +  EM + G+ PD Y++ TLI G+C++G+M KA
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +  +M +  +    +TYNTL+ GFC +  ++ A +LW  M+ R ++PN IS   L++G
Sbjct: 414 FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG 473

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
               G   +A  LW E + +G+   +++ NT+I G C+ G  ++A+E L +M      PD
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           S++Y TL +G+ +   +  A  L++KME+ G  P V  +N  +TG     + H    I  
Sbjct: 534 SLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHS 593

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M  +GL+P+  TY  LI G   + NL EA   + EM+  G  P+
Sbjct: 594 EMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 152/510 (29%), Positives = 270/510 (52%), Gaps = 26/510 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  ++D A     EM   G++ +   YNT+IN  C+ G +EE  +++  M   G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  ++YN+LI+G C++G   +A E+   M++ GL+  T TYNTLL   C    + +A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++  M +RGVAP+ +S STL+    + G+ ++AL  ++E  + GL  + + +  +ING 
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA ++ D M E  C  D +TY T+ +G C+   L  A  L N+M   G  P  
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F + I GH      +K  ++   M+ + + P++VTY  LI G+CK G + +A  L+ +
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL--------------- 345
           M++  ++PN      L++ +   G V EA  +  ++V   + P                 
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVD 689

Query: 346 -----------VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
                      V  N II G C+SG  + A      + ++   PD+ +Y++LI+G     
Sbjct: 690 TIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASG 749

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           ++D+AF+L   M + GL P++ITYN ++ G C+ G++  +  +  ++  KG++P+  TY 
Sbjct: 750 SIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYN 809

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TLI+ +  +    EAF+   +M++ G++ +
Sbjct: 810 TLIDEYCKEGKTTEAFKLKQKMVEEGYMEE 839



 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 254/484 (52%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +      A M   +M   GV PD  T   +  AYCR+G + +A + +  M G G
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  +  Y+++++  C  G  + A+ +L+ + + GLSP+  TY  L+   C+   M EAE
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  EM   G +  D V++  +I  + + G++D A     EM+ AG+  +  +Y  +ING
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G + E  K+  EM + G   D  +YNT+++G CR   + +A ++   M+  G+   
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL+ G C    ++ AL L+ +M ++ + P+ ++ +TL+DG  K G+ E+A  LW 
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           + ++R ++ N I++  +ING C +G + EA  L   M      P  ++  T+  GYC+ G
Sbjct: 489 ETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A   ++KM   G  P    +N+ I G    +   K   + S+M  +GL P+++TY 
Sbjct: 549 QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+C++G +H++  + + M+  G+NP+    + L++    +  + EA     +++  
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 480 GFVP 483
             +P
Sbjct: 669 DMIP 672



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 263/550 (47%), Gaps = 88/550 (16%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK  +++  +  L EME  G+ PD  +YNTLI+ YCREG + +AF++   M   G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 61  LKPGVFTYNSLINGLC-----------------------------------KKGRCDRAK 85
           L     TYN+L+ G C                                   K G+ ++A 
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  E L  GL+ +  T+NT++   C+   M+EAEE+   M      PD +++ TL   +
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + GQL  A     +M+  G  P   ++   I G+       +   +  EM  +G   ++
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY  ++ G C+   L EA +L+ EM+  G+ P+ +  + L+    K+G +++A    ++
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA----NL 660

Query: 266 MTQKSIKPDI------------------------------VTYNTLIDGFCKVGEMEKAN 295
           + QK +  D+                              V +N +I G CK G +  A 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            L+  + +++  P+  +Y  LI+G  + G + EAF L   M+  G+ P +++ N++I G 
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+SG  S+A    +K+ S+G+ P+ I+YNTLI+ + +E    +AF L  KM  +G + + 
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEA 840

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           I                    +L +MIE  ++P+  TY TLI+G++   N++E  + +DE
Sbjct: 841 IK-------------------LLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDE 881

Query: 476 MLQRGFVPDD 485
           M  RG +P +
Sbjct: 882 MHIRGLLPTN 891



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 219/471 (46%), Gaps = 49/471 (10%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG--LSPDTA-----------TYNTLLV 108
           +P + ++  L++ L +  R   A+ +L  +      L P  A           +++ LL 
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
                  +S A  +F  M + G  P + S + L+    ++G    A M + +M+ AG++P
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           D     I+   YCR+G V +A++  +EM   G  +++V Y+ +++  C      +A  + 
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS-IKPDIVTYNTLIDGFCK 287
             +  +G+ P+  T+T L+ G+CKDG M +A  +   M +   I  D V Y  +I+G+C+
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G M+ A ++  +M    I  N   Y  +ING C +G + E  ++  EM   G++P   S
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            NT+I GYCR G   KA E    MV  G+   +++YNTL+ GF     +D A  L   M 
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456

Query: 408 NQGLVP-----------------------------------DVITYNVILTGFCRQGRMH 432
            +G+ P                                   +VIT+N ++ G C+ GRM 
Sbjct: 457 KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMA 516

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           ++E +L RM E    PD  TY TL +G+     L  A    ++M   GF P
Sbjct: 517 EAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAP 567



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 184/367 (50%), Gaps = 14/367 (3%)

Query: 133 PDIVSFSTLIGIFSRNGQLD--RALMYFREMKSAGLVP-----------DNVLYTIIING 179
           P +VS + L+ I +R  +    RAL+      +  L P             V + +++  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +   G +  AL + D M + GC   + + N +LN L ++     A  ++ +M   GV PD
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T   +   +C+DG + +A+   + M    ++ ++V Y+ ++D +C +G  E A ++  
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG-IKPTLVSCNTIIKGYCRS 358
            +  + +SPN ++Y +L+ GYC  G + EA R+  EM   G I    V+   +I GYC+ 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A    ++M   G+  +   YNT+ING  +   M++   ++ +ME+ G+ PD  +Y
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N ++ G+CR+G M  +  +   M+  GL     TY TL+ G  S + + +A R    ML+
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457

Query: 479 RGFVPDD 485
           RG  P++
Sbjct: 458 RGVAPNE 464



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 16/237 (6%)

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM-------------IS 303
           + AL+LF +   +   P +V++  L+    +      A  L + +             + 
Sbjct: 85  DAALHLFRLAPSR---PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVY 141

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R  + + +S+ +L+  +   G ++ A  ++  M   G +P+L SCN ++    +SGD   
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A     +M   GV PD  +   +   + R+  + +A   V +ME  GL  +++ Y+ ++ 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +C  G   D+  IL  +  KGL+P+  TYT L+ G+     ++EA R   EM + G
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 253/485 (52%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++ ++ KD + +       EM  KG+ P+  T+N LIN  C EG L++A  L+  M   G
Sbjct: 955  ILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENG 1014

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P + TYN+L+N  CKKGR   A E++D M+  G+  D  TYN  +   C     ++A 
Sbjct: 1015 FVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAY 1074

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  +M +  ++P+ V+++TLI  F + G++  A   F EM    L P+ V Y  +I G+
Sbjct: 1075 LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGH 1134

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C  G   EAL++ D M   G  ++ VTY T+LNGLC+ +    A  L   M    +    
Sbjct: 1135 CHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGH 1194

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
              +T LI G CK+G +++A+ L   M +  + PD++TY++LI+GFC+VG ++ A ++   
Sbjct: 1195 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 1254

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M    +  N I Y  LI  +C  G+VTEA +++  M   G      +CN ++   CR G 
Sbjct: 1255 MYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGK 1314

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              +A++FL  M   G+ P+SI+Y+ +ING+    +   AF+    M   G  P   TY  
Sbjct: 1315 LGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS 1374

Query: 421  ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +L G C+ G + +++  L R+       D   Y TL+       NL EA    D+M+Q  
Sbjct: 1375 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 1434

Query: 481  FVPDD 485
             +PD 
Sbjct: 1435 VLPDS 1439



 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 275/520 (52%), Gaps = 36/520 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++N LC +  +  A   L +ME+ G  P  VTYNTL+N YC++G  + A +L++ M  KG
Sbjct: 990  LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 1049

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            ++  V TYN  I+ LC   R  +A  +L +M +  +SP+  TYNTL+    ++  +  A 
Sbjct: 1050 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 1109

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL-------------- 166
            ++F EMS+  ++P+ V+++ LIG     G  + AL     M++AGL              
Sbjct: 1110 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 1169

Query: 167  ---------------------VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                                 V  ++ YT++I+G C+NG + EA+++   M + G   DV
Sbjct: 1170 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 1229

Query: 206  VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            +TY++++NG CR   +  A ++   M   G+  +   ++TLI+  C+ GN+ +A+ ++ +
Sbjct: 1230 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 1289

Query: 266  MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
            M       D  T N L+   C+ G++ +A K    M    + PN I+Y  +INGY S+G 
Sbjct: 1290 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 1349

Query: 326  VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
               AF  + +M+  G  P+  +  +++KG C+ G+  +A +FL+++       DS+ YNT
Sbjct: 1350 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNT 1409

Query: 386  LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
            L+    +  N+ +A AL  KM    ++PD  TY+ +LTG CR+G+   +  +    + +G
Sbjct: 1410 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG 1469

Query: 446  -LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             L P+   YT L++G     + K AF F +EM+++G  PD
Sbjct: 1470 TLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPD 1509



 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 158/517 (30%), Positives = 252/517 (48%), Gaps = 36/517 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ LCK+  +D A   +  M + GV PD +TY++LIN +CR G ++ A +++  M   G
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            L      Y++LI   C+ G    A +V   M   G   D  T N L+   CR   + EAE
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  C MSR G+ P+ +++  +I  +   G    A  +F +M   G  P    Y  ++ G 
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+ G ++EA K  + +      +D V YNT+L   C++  L EA  LF++M++  V PD 
Sbjct: 1380 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 1439

Query: 241  YTFTTLIHGHC------------------------------------KDGNMNKALNLFD 264
            YT+++L+ G C                                    K G+   A   F+
Sbjct: 1440 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 1499

Query: 265  IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
             M +K   PD V +N +ID   + G+M KAN  ++ M    + PN  +Y IL++G+    
Sbjct: 1500 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 1559

Query: 325  HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
             +     L+  M+ +GI P  ++ +++I G  +SG      + L KM+ EG   D  ++N
Sbjct: 1560 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFN 1619

Query: 385  TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             LIN +     M KAF LV+ M   G+ PD  TYN I  G  ++    +S ++L  M+E 
Sbjct: 1620 ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 1679

Query: 445  GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            G+ P  + Y TLING     +++ AF+  DEM   GF
Sbjct: 1680 GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 250/520 (48%), Gaps = 36/520 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V++LC+D K+  A+ FLC M + G+ P+++TY+ +IN Y   G    AF   + M   G
Sbjct: 1305 LVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 1364

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P  FTY SL+ GLCK G    AK+ L+ +  +  + D+  YNTLL E+C+  N+ EA 
Sbjct: 1365 QHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAV 1424

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF-REMKSAGLVPDNVLYTIIING 179
             +F +M +  V PD  ++S+L+    R G+   A+  F   M    L P++V+YT +++G
Sbjct: 1425 ALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDG 1484

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
              + G    A    +EM++KG   D V +N I++   R   + +A+D F+ M   GV P+
Sbjct: 1485 LSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 1544

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              T+  L+HG  K   + + L+L+  M ++ I PD +T+++LI G  K G  +   KL  
Sbjct: 1545 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 1604

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRL--------------------------- 332
             MI      +  ++ ILIN Y   G + +AF L                           
Sbjct: 1605 KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 1664

Query: 333  --------WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
                     +EM+  G+ P      T+I G CR GD   A +   +M + G     ++ +
Sbjct: 1665 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 1724

Query: 385  TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             ++ G +     + A  ++  M    L+P + T+  ++  FCR  ++ ++  +   M   
Sbjct: 1725 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1784

Query: 445  GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GL  D   Y  LI G  +  +   AF  ++EM  R   P+
Sbjct: 1785 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1824



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 249/503 (49%), Gaps = 24/503 (4%)

Query: 2    VNALCKDHKIDSAKMFLCEMEQKGVYPDTV----------------TYNTLINAYCREGF 45
             + L K    DSAK  L  + Q G+   ++                 ++ LI  Y +EG 
Sbjct: 870  AHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGM 929

Query: 46   LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
            ++ A +    +   G KP V+T N ++  + K  R +    +  EM   G+ P+  T+N 
Sbjct: 930  IDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNI 989

Query: 106  LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
            L+   C + N+ +A  +  +M   G  P IV+++TL+  + + G+   A+     M   G
Sbjct: 990  LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 1049

Query: 166  LVPDNVLYTIIINGYCRNGFVLEAL----KMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
            +  D   Y + I+  C N    +A     KMR EM+      + VTYNT++NG  +   +
Sbjct: 1050 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISP----NEVTYNTLINGFVKEGKI 1105

Query: 222  TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
              A  +FNEM +  + P+  T+  LI GHC  G+  +AL L D M    ++ + VTY TL
Sbjct: 1106 GVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTL 1165

Query: 282  IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
            ++G CK  + E A +L   M    +   +I+Y +LI+G C  G + EA +L   M   G+
Sbjct: 1166 LNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGV 1225

Query: 342  KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
             P +++ +++I G+CR G+   A E + +M   G+  + I Y+TLI  F +  N+ +A  
Sbjct: 1226 NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 1285

Query: 402  LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
            + + M   G   D  T NV+++  CR G++ ++E  L  M   GL P+  TY  +ING+ 
Sbjct: 1286 VYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYG 1345

Query: 462  SQNNLKEAFRFHDEMLQRGFVPD 484
            S  +   AF F D+M++ G  P 
Sbjct: 1346 SIGDPLNAFSFFDDMIKCGQHPS 1368



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 2/175 (1%)

Query: 313  YGILINGYCSMGHVTEAFRLWYEMVG-KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            + +LI  Y   G +  A    +E+VG  G KP++ +CN I+    +            +M
Sbjct: 917  FDLLIRVYLKEGMIDYAVET-FELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 372  VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
              +G+ P+  ++N LING   E N+ KA  L+ +ME  G VP ++TYN +L  +C++GR 
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 432  HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              +  ++  MI KG+  D  TY   I+   + +   +A+    +M +    P++ 
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 1090


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 151/457 (33%), Positives = 245/457 (53%), Gaps = 1/457 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P TV +N L+ +  +       F L N M   G+ P V+T N LIN  C   R   A  V
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  PDTAT+ TL+   C +  + +A  +F +M   G  P++V++ TLI    +
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G  + A+   R M+     PD V+YT II+  C++  V EA  +  +M+ +G   D+ T
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y ++++ LC          L N+M+   + PD   F+T++   CK+G + +A ++ D+M 
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            + ++P++VTYN L+DG C   EM++A K++  M+    +PN ISY  LINGYC +  + 
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EM  K + P  V+ NT++   C  G    A     +MV+ G  PD  +Y  L+
Sbjct: 367 KATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 425

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   ++ ++D+A AL+  +E   + PD+  Y +++ G CR G +  +  I   +  KGL 
Sbjct: 426 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 485

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TYT +ING   +  L EA +   EM   G  PD
Sbjct: 486 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPD 522



 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 248/465 (53%), Gaps = 1/465 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ PD  T N LIN++C    L  AF ++  +   G +P   T+ +LI GLC +G
Sbjct: 94  QMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEG 153

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+M+  G  P+  TY TL+   C+  N + A  +   M +    PD+V ++
Sbjct: 154 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 213

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           ++I    ++ Q+  A   F +M   G+ PD   YT +I+  C          + ++M+  
Sbjct: 214 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 273

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + DVV ++T+++ LC+   +TEA D+ + M+ RGV P+  T+  L+ GHC    M++A
Sbjct: 274 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEA 333

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD M      P++++YNTLI+G+CK+  M+KA  L+ +M  +++ PN ++Y  L++ 
Sbjct: 334 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH- 392

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + +A  L++EMV  G  P L +   ++   C+     +A   L  +    +DPD
Sbjct: 393 XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPD 452

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              Y  +I+G  R   ++ A  + S + ++GL P+V TY +++ G CR+G + ++  +  
Sbjct: 453 IQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 512

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   G +PD  TY T+  G +       A +   EML RGF  D
Sbjct: 513 EMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSAD 557



 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 250/457 (54%), Gaps = 1/457 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C  +++  A   L ++ + G  PDT T+ TLI   C EG + +A  L + M G+G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G  + A  +L  M Q    PD   Y +++   C+   ++EA 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G++PDI ++++LI       +         +M ++ ++PD V+++ +++  
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + D M+ +G   +VVTYN +++G C    + EA  +F+ M+  G  P+ 
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI+G+CK   M+KA  LF+ M QK + P+ VTYNTL+   C VG ++ A  L+ +
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHE 408

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    P+  +Y IL++  C   H+ EA  L   + G  + P +     +I G CR+G+
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ P+  +Y  +ING  R   +D+A  L  +M+  G  PD  TYN 
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           I  G  +      +  +L  M+ +G + D ST T L+
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 200/388 (51%), Gaps = 1/388 (0%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D A    + ML M   P T  +N LL    + +       +  +M   G+ PD+ + + L
Sbjct: 51  DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 110

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F    +L  A     ++   G  PD   +T +I G C  G + +AL + D+M+ +G 
Sbjct: 111 INSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF 170

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             +VVTY T++NGLC+      A  L   M +    PD   +T++I   CKD  + +A N
Sbjct: 171 QPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFN 230

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           LF  M  + I PDI TY +LI   C + E +    L   MI+ KI P+ + +  +++  C
Sbjct: 231 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC 290

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G +TEA  +   M+ +G++P +V+ N ++ G+C   +  +A +    MV  G  P+ I
Sbjct: 291 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 350

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           SYNTLING+ + + MDKA  L  +M  + L+P+ +TYN ++   C  GR+ D+  +   M
Sbjct: 351 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEM 409

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           +  G  PD +TY  L++    +++L EA
Sbjct: 410 VAHGQIPDLATYRILLDYLCKKSHLDEA 437



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 208/411 (50%), Gaps = 40/411 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK    ++A   L  MEQ    PD V Y ++I++ C++  + EAF L + M G+G
Sbjct: 180 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG 239

Query: 61  LKPGVFTYNSLI-----------------------------------NGLCKKGRCDRAK 85
           + P +FTY SLI                                   + LCK+G+   A 
Sbjct: 240 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 299

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +V+D M+  G+ P+  TYN L+   C +  M EA ++F  M   G AP+++S++TLI  +
Sbjct: 300 DVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGY 359

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  ++D+A   F EM    L+P+ V Y  +++  C  G + +A+ +  EM+  G + D+
Sbjct: 360 CKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDL 418

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TY  +L+ LC+   L EA  L   +    + PD   +T +I G C+ G +  A ++F  
Sbjct: 419 ATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN 478

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           ++ K ++P++ TY  +I+G C+ G +++ANKL+ +M     SP+  +Y  +  G      
Sbjct: 479 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 538

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
              A +L  EM+ +G    + +   +++  C      K D+ + +++SE V
Sbjct: 539 ALRAIQLLQEMLARGFSADVSTTTLLVEMLCD----DKLDQSVKQILSEFV 585



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 1/233 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++D A     EM QK + P+TVTYNTL++  C  G L++A  L + M   G
Sbjct: 355 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHG 413

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY  L++ LCKK   D A  +L  +    + PD   Y  ++   CR   +  A 
Sbjct: 414 QIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 473

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  +S +G+ P++ +++ +I    R G LD A   F EM   G  PD   Y  I  G 
Sbjct: 474 DIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGL 533

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            +N   L A+++  EML +G   DV T   ++  LC  K+      + +E ++
Sbjct: 534 LQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 150/514 (29%), Positives = 258/514 (50%), Gaps = 32/514 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A   L +M ++   P  VTY  L+ A C+     +A ++++ M  KG
Sbjct: 143 LIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG 202

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +ING+C++ R D A+++L+ +   G  PDT +Y T+L   C  +   + E
Sbjct: 203 CTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 262

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +FCEM      P+ V+F  L+  F R G ++RA+     M   G   +  L  I+IN  
Sbjct: 263 VLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSI 322

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A +  + M   GC  D ++Y T+L GLCRA    +A +L NEM+ +   P+ 
Sbjct: 323 CKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNE 382

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG----------- 289
            TF T I   C+ G +++A+ L + M +      IVTYN L++GFC  G           
Sbjct: 383 VTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNS 442

Query: 290 ---------------------EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                                 ++ A +L A+M+      N +++ +L++ +C  G V E
Sbjct: 443 LPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEE 502

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  +M+  G  P L++ NT++ G     ++ +A E L  +VS+G+  D+I+Y+++++
Sbjct: 503 AIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVD 562

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              RE+ +++A  +   +++ G+ P  + YN IL+  C++     +      M+     P
Sbjct: 563 VLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMP 622

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           + STY  LI G   +  LKEA     E+  RG +
Sbjct: 623 NESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656



 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 240/484 (49%), Gaps = 6/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  +   A   L   E  G   D   YNTL+  YCR G L+ A +L+ SM    
Sbjct: 76  LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP--- 132

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TY  LI GLC +GR   A  +LD+ML+    P   TY  LL   C+     +A 
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  +G  P+IV+++ +I    R  ++D A      + S G  PD V YT ++ G 
Sbjct: 193 KVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +   +  EM+E  CV + VT++ ++   CR  M+  A ++ + M E G   + 
Sbjct: 253 CAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANT 312

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                +I+  CK G ++ A    + M      PD ++Y T++ G C+ G  E A +L  +
Sbjct: 313 TLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNE 372

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   PN +++   I   C  G + +A  L  +M   G    +V+ N ++ G+C  G 
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGR 432

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E  + +  E   P++I+Y TL+ G    E +D A  L+++M       +V+T+NV
Sbjct: 433 VDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNV 489

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++ FC++G + ++  ++ +M+E G  P+  T+ TL++G     N +EA      ++ +G
Sbjct: 490 LVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKG 549

Query: 481 FVPD 484
              D
Sbjct: 550 ISLD 553



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 214/433 (49%), Gaps = 6/433 (1%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L EA +L+   + +G  P V+    LI  LC++GR   A  VL      G   D   YNT
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   CR   +  A  +   M    V PD  +++ LI      G++  AL    +M    
Sbjct: 111 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P  V YT+++   C++    +A+K+ DEM  KGC  ++VTYN I+NG+CR   + +A 
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            + N +   G  PD  ++TT++ G C          LF  M + +  P+ VT++ L+  F
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C+ G +E+A ++   M     + N     I+IN  C  G V +AF     M   G  P  
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDT 347

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           +S  T++KG CR+G    A E L++MV +   P+ +++NT I    ++  +D+A  L+ +
Sbjct: 348 ISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQ 407

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M   G    ++TYN ++ GFC QGR+ DS L L+  +     P+  TYTTL+ G      
Sbjct: 408 MPEYGCSVGIVTYNALVNGFCVQGRV-DSALELFNSLP--CEPNTITYTTLLTGLCHAER 464

Query: 466 LKEAFRFHDEMLQ 478
           L  A     EM+Q
Sbjct: 465 LDAAAELLAEMMQ 477



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 184/384 (47%), Gaps = 7/384 (1%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           SP ++    L+     +++++EA  +    + RG APD+   + LI    R G+   A  
Sbjct: 36  SPASSRLRRLIA----RDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAAR 91

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
             R  + +G   D   Y  ++ GYCR G +  A ++   M       D  TY  ++ GLC
Sbjct: 92  VLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPP---DAYTYTPLIRGLC 148

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
               + +A  L ++ML R   P   T+T L+   CK     +A+ + D M  K   P+IV
Sbjct: 149 DRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIV 208

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TYN +I+G C+   ++ A ++   + S    P+ +SY  ++ G C+     +   L+ EM
Sbjct: 209 TYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEM 268

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           V     P  V+ + +++ +CR G   +A E L +M   G   ++   N +IN   ++  +
Sbjct: 269 VENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRV 328

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           D AF  ++ M + G  PD I+Y  +L G CR GR  D++ +L  M+ K   P+  T+ T 
Sbjct: 329 DDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTF 388

Query: 457 INGHVSQNNLKEAFRFHDEMLQRG 480
           I     +  + +A    ++M + G
Sbjct: 389 ICILCQKGLIDQAILLIEQMPEYG 412



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 172/347 (49%), Gaps = 4/347 (1%)

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           S L  + +R+   + A +  R   S G  PD  L T +I   CR G   +A ++      
Sbjct: 40  SRLRRLIARDDLAEAARLVERS-TSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G  +DV  YNT++ G CR   L  A  L   M    V PD YT+T LI G C  G +  
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGD 155

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           AL+L D M ++  +P +VTY  L++  CK     +A K+  +M ++  +PN ++Y ++IN
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G C    V +A ++   +   G +P  VS  T++KG C +      +    +MV     P
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVP 275

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           + ++++ L+  F R   +++A  ++ +M   G   +    N+++   C+QGR+ D+   L
Sbjct: 276 NEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL 335

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M   G +PD  +YTT++ G       ++A    +EM+++   P++
Sbjct: 336 NNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNE 382



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 86/172 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C+   ++ A   + +M + G  P+ +T+NTL++    +   EEA +L++ +  KG
Sbjct: 490 LVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKG 549

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY+S+++ L ++ R + A ++   +  MG+ P    YN +L   C++     A 
Sbjct: 550 ISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAI 609

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           + F  M      P+  ++  LI   +R G L  A     E+ S G++  +++
Sbjct: 610 DFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLI 661



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 4/98 (4%)

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
            +  +++ +A  LV +  ++G  PDV     ++   CR+GR  D+  +L      G   D
Sbjct: 45  LIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVD 104

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
              Y TL+ G+     L  A R    M     VP DA+
Sbjct: 105 VFAYNTLVAGYCRYGRLDAARRLIASMP----VPPDAY 138


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 153/474 (32%), Positives = 257/474 (54%), Gaps = 1/474 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D+ ++F  EM ++ V P+ +TYNT+I+ + + G LE  F+L + M   GLKP   TYN L
Sbjct: 33  DAVEVF-DEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVL 91

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++GLC+ GR      +LDEM    + PD  TY+ L     R  +      +F +  + GV
Sbjct: 92  LSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV 151

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
                + S L+    ++G++  A    + + +AGLVP  V+Y  +INGYC+ G +  A  
Sbjct: 152 TIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFS 211

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
              +M  +    D +TYN ++NGLC+A+ +T A DL  EM + GV P   TF TLI  + 
Sbjct: 212 TFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYG 271

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           + G + K   +   M +  +KP++V+Y ++++ FCK G++ +A  +  DM  + + PN  
Sbjct: 272 RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ 331

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y  +I+ Y   G   +AF L  +M   GI P++V+ N +IKG C     S+A+E ++ +
Sbjct: 332 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 391

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            +  + PD++SYNTLI+      N+DKA  L  +M   G+   V TY+ +++G    GR+
Sbjct: 392 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 451

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++ E +  +M++  + P  + +  ++  +    N  +A     EMLQ+    DD
Sbjct: 452 NEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 505



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 232/460 (50%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  +YN +I    R G   +A ++ + M+ + + P   TYN++I+G  K G  +    +
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            D+M+  GL P+  TYN LL   CR   M E   +  EM+ + + PD  ++S L    SR
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           NG     L  F +    G+   +   +I++NG C++G V  A ++   ++  G V   V 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++NG C+   L  A   F +M  R + PD  T+  LI+G CK   +  A +L   M 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
              + P + T+NTLID + + G++EK   + ++M    + PN +SYG ++N +C  G + 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +M  K + P     N II  Y   G   +A   + KM S G+ P  ++YN LI
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G   +  + +A  +++ + N  L+PD ++YN +++  C +G +  +  +  RM + G+ 
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
               TY  LI+G      L E    + +M+Q   VP +A 
Sbjct: 433 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 472



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 228/449 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++   K   +++      +M   G+ P+ +TYN L++  CR G + E   L++ M+ + 
Sbjct: 56  MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 115

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTY+ L +GL + G       +  + L+ G++    T + LL   C+   +S AE
Sbjct: 116 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 175

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   +   G+ P  V ++TLI  + + G+L+ A   F +MKS  + PD++ Y  +ING 
Sbjct: 176 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 235

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A  +  EM + G    V T+NT+++   R   L +   + +EM E G+ P+ 
Sbjct: 236 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 295

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ ++++  CK+G + +A+ + D M  K + P+   YN +ID + + G  ++A  L   
Sbjct: 296 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 355

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  ISP+ ++Y +LI G C+   ++EA  +   +    + P  VS NT+I   C  G+
Sbjct: 356 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 415

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +   +M   G+     +Y+ LI+G      +++   L  KM    +VP    +N+
Sbjct: 416 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 475

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           ++  + + G    +E +   M++K  N D
Sbjct: 476 MVEAYSKYGNEIKAEDLRKEMLQKRNNHD 504


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 253/485 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ++ KD + +       EM  KG+ P+  T+N LIN  C EG L++A  L+  M   G
Sbjct: 204 ILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN+L+N  CKKGR   A E++D M+  G+  D  TYN  +   C     ++A 
Sbjct: 264 FVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAY 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +  ++P+ V+++TLI  F + G++  A   F EM    L P+ V Y  +I G+
Sbjct: 324 LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGH 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EAL++ D M   G  ++ VTY T+LNGLC+ +    A  L   M    +    
Sbjct: 384 CHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGH 443

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T LI G CK+G +++A+ L   M +  + PD++TY++LI+GFC+VG ++ A ++   
Sbjct: 444 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 503

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +  N I Y  LI  +C  G+VTEA +++  M   G      +CN ++   CR G 
Sbjct: 504 MYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGK 563

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A++FL  M   G+ P+SI+Y+ +ING+    +   AF+    M   G  P   TY  
Sbjct: 564 LGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS 623

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C+ G + +++  L R+       D   Y TL+       NL EA    D+M+Q  
Sbjct: 624 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 683

Query: 481 FVPDD 485
            +PD 
Sbjct: 684 VLPDS 688



 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 275/520 (52%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC +  +  A   L +ME+ G  P  VTYNTL+N YC++G  + A +L++ M  KG
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 298

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V TYN  I+ LC   R  +A  +L +M +  +SP+  TYNTL+    ++  +  A 
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL-------------- 166
           ++F EMS+  ++P+ V+++ LIG     G  + AL     M++AGL              
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 418

Query: 167 ---------------------VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                                V  ++ YT++I+G C+NG + EA+++   M + G   DV
Sbjct: 419 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 478

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TY++++NG CR   +  A ++   M   G+  +   ++TLI+  C+ GN+ +A+ ++ +
Sbjct: 479 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 538

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M       D  T N L+   C+ G++ +A K    M    + PN I+Y  +INGY S+G 
Sbjct: 539 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 598

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              AF  + +M+  G  P+  +  +++KG C+ G+  +A +FL+++       DS+ YNT
Sbjct: 599 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNT 658

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+    +  N+ +A AL  KM    ++PD  TY+ +LTG CR+G+   +  +    + +G
Sbjct: 659 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG 718

Query: 446 -LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            L P+   YT L++G     + K AF F +EM+++G  PD
Sbjct: 719 TLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPD 758



 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 158/517 (30%), Positives = 252/517 (48%), Gaps = 36/517 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+  +D A   +  M + GV PD +TY++LIN +CR G ++ A +++  M   G
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L      Y++LI   C+ G    A +V   M   G   D  T N L+   CR   + EAE
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +  C MSR G+ P+ +++  +I  +   G    A  +F +M   G  P    Y  ++ G 
Sbjct: 569 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 628

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA K  + +      +D V YNT+L   C++  L EA  LF++M++  V PD 
Sbjct: 629 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 688

Query: 241 YTFTTLIHGHC------------------------------------KDGNMNKALNLFD 264
           YT+++L+ G C                                    K G+   A   F+
Sbjct: 689 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 748

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +K   PD V +N +ID   + G+M KAN  ++ M    + PN  +Y IL++G+    
Sbjct: 749 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 808

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +     L+  M+ +GI P  ++ +++I G  +SG      + L KM+ EG   D  ++N
Sbjct: 809 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFN 868

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LIN +     M KAF LV+ M   G+ PD  TYN I  G  ++    +S ++L  M+E 
Sbjct: 869 ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 928

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           G+ P  + Y TLING     +++ AF+  DEM   GF
Sbjct: 929 GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 250/520 (48%), Gaps = 36/520 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V++LC+D K+  A+ FLC M + G+ P+++TY+ +IN Y   G    AF   + M   G
Sbjct: 554  LVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 613

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P  FTY SL+ GLCK G    AK+ L+ +  +  + D+  YNTLL E+C+  N+ EA 
Sbjct: 614  QHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAV 673

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF-REMKSAGLVPDNVLYTIIING 179
             +F +M +  V PD  ++S+L+    R G+   A+  F   M    L P++V+YT +++G
Sbjct: 674  ALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDG 733

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
              + G    A    +EM++KG   D V +N I++   R   + +A+D F+ M   GV P+
Sbjct: 734  LSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 793

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              T+  L+HG  K   + + L+L+  M ++ I PD +T+++LI G  K G  +   KL  
Sbjct: 794  LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 853

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRL--------------------------- 332
             MI      +  ++ ILIN Y   G + +AF L                           
Sbjct: 854  KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 913

Query: 333  --------WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
                     +EM+  G+ P      T+I G CR GD   A +   +M + G     ++ +
Sbjct: 914  AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 973

Query: 385  TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             ++ G +     + A  ++  M    L+P + T+  ++  FCR  ++ ++  +   M   
Sbjct: 974  AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1033

Query: 445  GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GL  D   Y  LI G  +  +   AF  ++EM  R   P+
Sbjct: 1034 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1073



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 150/500 (30%), Positives = 248/500 (49%), Gaps = 24/500 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTV----------------TYNTLINAYCREGFLEE 48
           L K    DSAK  L  + Q G+   ++                 ++ LI  Y +EG ++ 
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDY 181

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           A +    +   G KP V+T N ++  + K  R +    +  EM   G+ P+  T+N L+ 
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 241

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
             C + N+ +A  +  +M   G  P IV+++TL+  + + G+   A+     M   G+  
Sbjct: 242 GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEA 301

Query: 169 DNVLYTIIINGYCRNGFVLEAL----KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           D   Y + I+  C N    +A     KMR EM+      + VTYNT++NG  +   +  A
Sbjct: 302 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISP----NEVTYNTLINGFVKEGKIGVA 357

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +FNEM +  + P+  T+  LI GHC  G+  +AL L D M    ++ + VTY TL++G
Sbjct: 358 AQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG 417

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CK  + E A +L   M    +   +I+Y +LI+G C  G + EA +L   M   G+ P 
Sbjct: 418 LCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPD 477

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           +++ +++I G+CR G+   A E + +M   G+  + I Y+TLI  F +  N+ +A  + +
Sbjct: 478 VITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYA 537

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            M   G   D  T NV+++  CR G++ ++E  L  M   GL P+  TY  +ING+ S  
Sbjct: 538 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 597

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
           +   AF F D+M++ G  P 
Sbjct: 598 DPLNAFSFFDDMIKCGQHPS 617



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 2/175 (1%)

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVG-KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           + +LI  Y   G +  A    +E+VG  G KP++ +CN I+    +            +M
Sbjct: 166 FDLLIRVYLKEGMIDYAVET-FELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
             +G+ P+  ++N LING   E N+ KA  L+ +ME  G VP ++TYN +L  +C++GR 
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +  ++  MI KG+  D  TY   I+   + +   +A+    +M +    P++ 
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 339


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 151/466 (32%), Positives = 252/466 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM ++ V P+ +TYNT+I+ + + G LE  F+L + M   GLKP   TYN L++GLC+ G
Sbjct: 225 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG 284

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R      +LDEM    + PD  TY+ L     R  +      +F +  + GV     + S
Sbjct: 285 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 344

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            L+    ++G++  A    + + +AGLVP  V+Y  +INGYC+ G +  A     +M  +
Sbjct: 345 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 404

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               D +TYN ++NGLC+A+ +T A DL  EM + GV P   TF TLI  + + G + K 
Sbjct: 405 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 464

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +   M +  +KP++V+Y ++++ FCK G++ +A  +  DM  + + PN   Y  +I+ 
Sbjct: 465 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 524

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y   G   +AF L  +M   GI P++V+ N +IKG C     S+A+E ++ + +  + PD
Sbjct: 525 YVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 584

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           ++SYNTLI+      N+DKA  L  +M   G+   V TY+ +++G    GR+++ E +  
Sbjct: 585 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ 644

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +M++  + P  + +  ++  +    N  +A     EMLQ+    DD
Sbjct: 645 KMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 690



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 232/460 (50%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  +YN +I    R G   +A ++ + M+ + + P   TYN++I+G  K G  +    +
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            D+M+  GL P+  TYN LL   CR   M E   +  EM+ + + PD  ++S L    SR
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           NG     L  F +    G+   +   +I++NG C++G V  A ++   ++  G V   V 
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++NG C+   L  A   F +M  R + PD  T+  LI+G CK   +  A +L   M 
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
              + P + T+NTLID + + G++EK   + ++M    + PN +SYG ++N +C  G + 
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +M  K + P     N II  Y   G   +A   + KM S G+ P  ++YN LI
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G   +  + +A  +++ + N  L+PD ++YN +++  C +G +  +  +  RM + G+ 
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 617

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
               TY  LI+G      L E    + +M+Q   VP +A 
Sbjct: 618 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 657



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 228/449 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++   K   +++      +M   G+ P+ +TYN L++  CR G + E   L++ M+ + 
Sbjct: 241 MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 300

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTY+ L +GL + G       +  + L+ G++    T + LL   C+   +S AE
Sbjct: 301 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 360

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   +   G+ P  V ++TLI  + + G+L+ A   F +MKS  + PD++ Y  +ING 
Sbjct: 361 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 420

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A  +  EM + G    V T+NT+++   R   L +   + +EM E G+ P+ 
Sbjct: 421 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 480

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ ++++  CK+G + +A+ + D M  K + P+   YN +ID + + G  ++A  L   
Sbjct: 481 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 540

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  ISP+ ++Y +LI G C+   ++EA  +   +    + P  VS NT+I   C  G+
Sbjct: 541 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 600

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +   +M   G+     +Y+ LI+G      +++   L  KM    +VP    +N+
Sbjct: 601 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 660

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           ++  + + G    +E +   M++K  N D
Sbjct: 661 MVEAYSKYGNEIKAEDLRKEMLQKRNNHD 689



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 198/403 (49%), Gaps = 36/403 (8%)

Query: 117 SEAEEIFCEMSRRGVAPDI------------------------------------VSFST 140
           ++    F  ++  G  PD                                      S++ 
Sbjct: 146 ADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNV 205

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I    R G+   A+  F EM    ++P+++ Y  +I+G+ + G +    ++RD+M+  G
Sbjct: 206 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 265

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              + +TYN +L+GLCRA  + E   L +EM  + + PD +T++ L  G  ++G+    L
Sbjct: 266 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 325

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +LF    +  +     T + L++G CK G++  A ++   +++  + P  + Y  LINGY
Sbjct: 326 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 385

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G +  AF  + +M  + IKP  ++ N +I G C++   + A + L +M   GV+P  
Sbjct: 386 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 445

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            ++NTLI+ + R   ++K F ++S+M+  GL P+V++Y  I+  FC+ G++ ++  IL  
Sbjct: 446 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 505

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           M  K + P+   Y  +I+ +V      +AF   ++M   G  P
Sbjct: 506 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 548



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 3/159 (1%)

Query: 329 AFRLWYEMV--GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           A RL  ++    +   P+L SCN +++     G  +        + S G  PD+ ++N  
Sbjct: 111 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 170

Query: 387 INGFVREENMDKAFALVSKMENQGL-VPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +   V   ++ +A  ++ +M   G   P+  +YNV++ G  R GR  D+  +   M E+ 
Sbjct: 171 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 230

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + P+  TY T+I+GH+   +L+  FR  D+M+  G  P+
Sbjct: 231 VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPN 269



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 36/198 (18%)

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG-------- 375
           G   +  R +  +   G +P   + N  ++    +GD  +A   L +M  +G        
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202

Query: 376 ----------------------------VDPDSISYNTLINGFVREENMDKAFALVSKME 407
                                       V P+ I+YNT+I+G ++  +++  F L  +M 
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             GL P+ ITYNV+L+G CR GRM ++  +L  M  + + PD  TY+ L +G     + K
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322

Query: 468 EAFRFHDEMLQRGFVPDD 485
                  + L+ G    D
Sbjct: 323 AMLSLFGKYLKNGVTIGD 340


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 148/457 (32%), Positives = 249/457 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C  +++  A   L ++ + G  PDT T+ TLI     EG + EA  L + M G+G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LINGLCK G    A  +L  M+Q    P+   YNT++   C+   ++EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G++PDI ++++LI       +         EM  + ++PD V +  +++  
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  + D+M+++G   +VVTY  +++G C    + EA  +F+ M+ +G  P+ 
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI+G+CK   ++KA+ LF  M ++ + PD VTY+TLI G C V  ++ A  L+ +
Sbjct: 342 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 401

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    PN ++Y IL++  C   ++ EA  L   + G  + P +   N  I G CR+G+
Sbjct: 402 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE 461

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ PD  +Y+ +ING  R   +D+A  L  +M+  G   +   YN 
Sbjct: 462 LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNT 521

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           I  GF R      +  +L  M+ +G + D ST T  +
Sbjct: 522 ITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 558



 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 255/465 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ P+  T + LIN++C    +  AF ++  +   G +P   T+ +LI G+  +G
Sbjct: 86  QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEG 145

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+M+  G  PD  TY TL+   C+  N S A  +   M ++   P++ +++
Sbjct: 146 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 205

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++ Q+  A   F EM + G+ PD   Y  +I+  C          + +EM++ 
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + DVV++NT+++ LC+   +TEA D+ ++M++RGV P+  T+T L+ GHC    M++A
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD M  K   P++++YNTLI+G+CK+  ++KA  L+ +M  +++ P+ ++Y  LI+G
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 385

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +  + +A  L++EMV     P LV+   ++   C++   ++A   L  +    +DPD
Sbjct: 386 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 445

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
               N  I+G  R   ++ A  L S + ++GL PDV TY++++ G CR+G + ++  +  
Sbjct: 446 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 505

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M E G   +   Y T+  G +  N    A +   EM+ RGF  D
Sbjct: 506 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD 550



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 146/470 (31%), Positives = 239/470 (50%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID A      M +    P TV +N L+ +  +         L + M   G+ P ++T + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LIN  C   R   A  VL ++L++G  PDTAT+ TL+     +  + EA  +F +M   G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             PD+V++ TLI    + G    A+     M      P+   Y  II+  C++  V EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM+ KG   D+ TYN++++ LC          L NEM++  + PD  +F T++   
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+G + +A ++ D M Q+ ++P++VTY  L+DG C + EM++A K++  M+ +   PN 
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ISY  LINGYC +  + +A  L+ EM  + + P  V+ +T+I G C       A     +
Sbjct: 342 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 401

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV+    P+ ++Y  L++   +   + +A AL+  +E   L PD+   N+ + G CR G 
Sbjct: 402 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE 461

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  +  +   +  KGL PD  TY+ +ING   +  L EA +   EM + G
Sbjct: 462 LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/434 (31%), Positives = 222/434 (51%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           KI  A     +M  +G  PD VTY TLIN  C+ G    A +L+ SM  K  +P VF YN
Sbjct: 146 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 205

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           ++I+ LCK  +   A  +  EM+  G+SPD  TYN+L+   C          +  EM   
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
            + PD+VSF+T++    + G++  A     +M   G+ P+ V YT +++G+C    + EA
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           +K+ D M+ KGC+ +V++YNT++NG C+ + + +A  LF EM  + + PD  T++TLIHG
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 385

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C    +  A+ LF  M   S  P++VTY  L+D  CK   + +A  L   +    + P+
Sbjct: 386 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 445

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
                I I+G C  G +  A  L+  +  KG++P + + + +I G CR G   +A +   
Sbjct: 446 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 505

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M   G   +   YNT+  GF+R     +A  L+ +M  +G   D  T  + +      G
Sbjct: 506 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565

Query: 430 RMHDSELILWRMIE 443
                + IL   ++
Sbjct: 566 LDQSLKQILREFVQ 579



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 205/395 (51%)

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +ML +     + ++N    +S     +  A   F  M R    P  V F+ L+   ++  
Sbjct: 16  QMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMK 75

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
                L    +M S G+ P+     I+IN +C    V  A  +  ++L+ G   D  T+ 
Sbjct: 76  HHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFT 135

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T++ G+     + EA  LF++M+  G  PD  T+ TLI+G CK GN + A+ L   M QK
Sbjct: 136 TLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 195

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
           + +P++  YNT+ID  CK  ++ +A  L+++M+++ ISP+  +Y  LI+  C++      
Sbjct: 196 NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV 255

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  EMV   I P +VS NT++   C+ G  ++A + + KM+  GV+P+ ++Y  L++G
Sbjct: 256 ATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDG 315

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                 MD+A  +   M  +G +P+VI+YN ++ G+C+  R+  +  +   M  + L PD
Sbjct: 316 HCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPD 375

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             TY+TLI+G      L++A     EM+    +P+
Sbjct: 376 TVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 410


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/511 (30%), Positives = 259/511 (50%), Gaps = 36/511 (7%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           KI+ A   + ++   G  P   TYN L+N  C+ G LEEA  L+  +   G  P V TY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           SLI+GL K+ R   A ++  EM   GL+ DT  Y  L+ E  +   + +A  ++  M+  
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  PD+V+ ST+I   S+ G++  A+  F+ M++ GL P+ V+Y+ +I+G C+   +  A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           L+M  +M +  C  D +TYN +++GLC++  +  A   F+EMLE G  PD YT+  LI G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 250 HCKDGN------------------------------------MNKALNLFDIMTQKSIKP 273
            CK GN                                    + +A+ L + +T     P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
            I TYN L++G CK+G +E+A  L   ++    +P+ ++Y  LI+G        EA++L+
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EM  +G+    V    +I+   ++G   +A      M S G  PD ++ +T+I+G  + 
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             +  A  +   ME +GL P+ + Y+ ++ G C+  +M  +  +L +M +    PD  TY
Sbjct: 421 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 480

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             LI+G     +++ A  F DEML+ G  PD
Sbjct: 481 NILIDGLCKSGDVEAARAFFDEMLEAGCKPD 511



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 234/446 (52%), Gaps = 1/446 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L K  +I +A      ME +G+ P+ V Y+ LI+  C+   ++ A +++  M    
Sbjct: 132 MIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 191

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN LI+GLCK G  + A+   DEML+ G  PD  TYN L+   C+  N   A 
Sbjct: 192 CTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAS 251

Query: 121 EIFC-EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
                E +  G   DI +++ ++   ++N +++ A+    ++ + G  P    Y  ++NG
Sbjct: 252 HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNG 311

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G + EA+ +  ++++ GC  DVVTY ++++GL + K   EA  LF EM  RG+  D
Sbjct: 312 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 371

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +T LI    + G + +A +++  MT     PD+VT +T+IDG  K G +  A +++ 
Sbjct: 372 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 431

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M +R ++PN + Y  LI+G C    +  A  +  +M      P  ++ N +I G C+SG
Sbjct: 432 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 491

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D   A  F  +M+  G  PD  +YN LI+GF +  N D A  +   M +     +V+TY 
Sbjct: 492 DVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYG 551

Query: 420 VILTGFCRQGRMHDSELILWRMIEKG 445
            +++G C++ ++  + L    M E+G
Sbjct: 552 ALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 244/481 (50%), Gaps = 1/481 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L +  KI  A      M   G  PD VT +T+I+   + G +  A ++  SM  +G
Sbjct: 97  LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 156

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    Y++LI+GLCK  + D A E+L +M +   +PDT TYN L+   C+  ++  A 
Sbjct: 157 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAAR 216

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF-REMKSAGLVPDNVLYTIIING 179
             F EM   G  PD+ +++ LI  F + G  D A     +E    G   D   YT I++ 
Sbjct: 217 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDW 276

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             +N  + EA+ + +++   GC   + TYN +LNGLC+   L EA DL  ++++ G  PD
Sbjct: 277 LAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 336

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T+LI G  K+    +A  LF  M  + +  D V Y  LI    + G++ +A+ ++ 
Sbjct: 337 VVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYK 396

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M S    P+ ++   +I+G    G +  A R++  M  +G+ P  V  + +I G C++ 
Sbjct: 397 TMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 456

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A E L++M      PD+I+YN LI+G  +  +++ A A   +M   G  PDV TYN
Sbjct: 457 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 516

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++++GFC+ G    +  +   M     + +  TY  LI+G   +  L +A  +   M +R
Sbjct: 517 ILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKER 576

Query: 480 G 480
           G
Sbjct: 577 G 577



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 234/441 (53%), Gaps = 1/441 (0%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +EEA  LM  ++  G  P + TYN+L+NGLCK GR + A ++L +++  G +PD  TY +
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+    +++   EA ++F EM+ RG+A D V ++ LI    + G++ +A   ++ M S G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
            VPD V  + +I+G  + G +  A+++   M  +G   + V Y+ +++GLC+A+ +  A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           ++  +M +    PD  T+  LI G CK G++  A   FD M +   KPD+ TYN LI GF
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 286 CKVGEMEKA-NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           CK G  + A + L  +      + +  +Y  +++       + EA  L  ++   G  PT
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + + N ++ G C+ G   +A + L K+V  G  PD ++Y +LI+G  +E+   +A+ L  
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M  +GL  D + Y  ++    + G++  +  +   M   G  PD  T +T+I+G     
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421

Query: 465 NLKEAFRFHDEMLQRGFVPDD 485
            +  A R    M  RG  P++
Sbjct: 422 RIGAAVRIFKSMEARGLAPNE 442


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 153/485 (31%), Positives = 270/485 (55%), Gaps = 2/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ++C+      AK  +  ME  G     VTYN LI+  C+   + EA ++  S+ GKG
Sbjct: 231 VVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKG 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEA 119
           L   V TY +L+ G C+  + +   +++DEM+++G SP  A  + L V+  RK+  + +A
Sbjct: 291 LAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGL-VDGLRKQGKIDDA 349

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+  ++ R G  P++  ++ LI    + G LD+A + +  M    L P+ + Y+I+I+ 
Sbjct: 350 YELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDS 409

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR+G +  A+   D M++ G    V  YN+++NG C+   L+ A+ LF EM  +GV P 
Sbjct: 410 FCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPT 469

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TFT+LI G+CKD  + KA  L++ M    I P++ T+  LI G C   +M +A++L+ 
Sbjct: 470 ATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFD 529

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +++ RKI P  ++Y +LI GYC  G + +AF L  +M  KG+ P   +   +I G C +G
Sbjct: 530 ELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTG 589

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             SKA +F+  +  + V  + + Y+ L++G+ +E  + +A +   +M  +G+  D++ + 
Sbjct: 590 RVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHA 649

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++ G  +Q        +L  M ++GL PD   YT++I+ +  + + K+AF   D M+  
Sbjct: 650 VLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTE 709

Query: 480 GFVPD 484
              P+
Sbjct: 710 ECFPN 714



 Score =  284 bits (726), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 271/522 (51%), Gaps = 36/522 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+LCK   +D A++    M    + P+ +TY+ LI+++CR G L+ A    + M   G
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V+ YNSLING CK G    A+ +  EM   G+ P   T+ +L+   C+   + +A 
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAF 490

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M   G+ P++ +F+ LI       ++  A   F E+    + P  V Y ++I GY
Sbjct: 491 KLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGY 550

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G + +A ++ ++M +KG V D  TY  +++GLC    +++A D  +++ ++ V  + 
Sbjct: 551 CRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNE 610

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++ L+HG+C++G + +AL+    M Q+ I  D+V +  LIDG  K  + +    L  D
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKD 670

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+ + Y  +I+ Y   G   +AF  W  MV +   P +V+   ++ G C++G+
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGE 730

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     +M +  V P+SI+Y   ++   +E NM +A  L   M  +GL+ + +T+N+
Sbjct: 731 MDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNI 789

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN--------------- 465
           I+ GFC+ GR H++  +L  M E G+ PD  TY+TLI  +    N               
Sbjct: 790 IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRG 849

Query: 466 --------------------LKEAFRFHDEMLQRGFVPDDAF 487
                               L +AF   D+ML+RG +PD+ +
Sbjct: 850 LEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKY 891



 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 251/478 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+  + ++    + EM + G  P     + L++   ++G +++A++L+  +   G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +F YN+LIN LCK G  D+A+ +   M  M L P+  TY+ L+   CR   +  A 
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M + G+   + ++++LI    + G L  A   F EM + G+ P    +T +I+GY
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  V +A K+ ++M++ G   +V T+  +++GLC    + EA +LF+E++ER + P  
Sbjct: 481 CKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTE 540

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G+C+DG ++KA  L + M QK + PD  TY  LI G C  G + KA     D
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + +  N + Y  L++GYC  G + EA     EM+ +GI   LV    +I G  +  D
Sbjct: 601 LHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPD 660

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                + L  M  +G+ PD++ Y ++I+ + +E +  KAF     M  +   P+V+TY  
Sbjct: 661 RKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTA 720

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++ G C+ G M  + L+  RM    + P+  TY   ++    + N+KEA   H  ML+
Sbjct: 721 LMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK 778



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 243/460 (52%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M    + P+  T + L+N   +       ++L +     G++P  +T ++++  +C+   
Sbjct: 181 MFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKD 240

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
             RAKE +  M   G      TYN L+   C+ + +SEA E+   +  +G+A D+V++ T
Sbjct: 241 FLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCT 300

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  F R  Q +  +    EM   G  P     + +++G  + G + +A ++  ++   G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            V ++  YN ++N LC+   L +A+ L++ M    + P+  T++ LI   C+ G ++ A+
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           + FD M Q  I   +  YN+LI+G CK G++  A  L+ +M ++ + P   ++  LI+GY
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C    V +AF+L+ +M+  GI P + +   +I G C +   ++A E   ++V   + P  
Sbjct: 481 CKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTE 540

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YN LI G+ R+  +DKAF L+  M  +GLVPD  TY  +++G C  GR+  ++  +  
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + ++ +  +   Y+ L++G+  +  L EA     EM+QRG
Sbjct: 601 LHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 234/453 (51%)

Query: 27  YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE 86
           +  T+ +N L+  Y     + +A  ++  M    L P V T ++L+NGL K  +     E
Sbjct: 152 FSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWE 211

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           + DE +  G+ PD  T + ++   C  ++   A+E    M   G    IV+++ LI    
Sbjct: 212 LFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLC 271

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           +  ++  A+   R +   GL  D V Y  ++ G+CR       +++ DEM+E G      
Sbjct: 272 KGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEA 331

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
             + +++GL +   + +A +L  ++   G  P+ + +  LI+  CK G+++KA  L+  M
Sbjct: 332 AVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNM 391

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
           +  +++P+ +TY+ LID FC+ G ++ A   +  MI   I     +Y  LING C  G +
Sbjct: 392 SLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDL 451

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           + A  L+ EM  KG++PT  +  ++I GYC+     KA +  +KM+  G+ P+  ++  L
Sbjct: 452 SAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTAL 511

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G      M +A  L  ++  + + P  +TYNV++ G+CR G++  +  +L  M +KGL
Sbjct: 512 ISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGL 571

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            PD  TY  LI+G  S   + +A  F D++ ++
Sbjct: 572 VPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQ 604



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 213/417 (51%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           +N L+       R   A  ++  M    L P+  T + LL    +        E+F E  
Sbjct: 158 FNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESV 217

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             GV PD  + S ++          RA    R M++ G     V Y ++I+G C+   V 
Sbjct: 218 NAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVS 277

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EA++++  +  KG   DVVTY T++ G CR +       L +EM+E G  P     + L+
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLV 337

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G  K G ++ A  L   + +    P++  YN LI+  CK G+++KA  L+++M    + 
Sbjct: 338 DGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLR 397

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN I+Y ILI+ +C  G +  A   +  M+  GI  T+ + N++I G C+ GD S A+  
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESL 457

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M ++GV+P + ++ +LI+G+ ++  + KAF L +KM + G+ P+V T+  +++G C 
Sbjct: 458 FIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCS 517

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +M ++  +   ++E+ + P   TY  LI G+     + +AF   ++M Q+G VPD
Sbjct: 518 TNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPD 574



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 187/387 (48%), Gaps = 3/387 (0%)

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
           P  +  +TLL+   R+ +       F +  +R      + F+ L+  +  + ++  A++ 
Sbjct: 121 PANSLLHTLLL---RESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVI 177

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
            + M +  L+P+    + ++NG  +    +   ++ DE +  G   D  T + ++  +C 
Sbjct: 178 VKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCE 237

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
            K    A +    M   G      T+  LIHG CK   +++A+ +   +  K +  D+VT
Sbjct: 238 LKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVT 297

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           Y TL+ GFC++ + E   +L  +M+    SP   +   L++G    G + +A+ L  ++ 
Sbjct: 298 YCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVG 357

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
             G  P L   N +I   C+ GD  KA+   S M    + P+ I+Y+ LI+ F R   +D
Sbjct: 358 RFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLD 417

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            A +   +M   G+   V  YN ++ G C+ G +  +E +   M  KG+ P  +T+T+LI
Sbjct: 418 VAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLI 477

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +G+     +++AF+ +++M+  G  P+
Sbjct: 478 SGYCKDLQVQKAFKLYNKMIDNGITPN 504



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 109/275 (39%), Gaps = 24/275 (8%)

Query: 236 VFPDFYTFTTLIHGHCKDGNMNK------ALNLFDIM-TQKSIKPDIVTYNTLIDGFCKV 288
            F D    +TL   H +   MN       AL  F+ +   K++     +Y  ++      
Sbjct: 57  AFNDASISSTLRPHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHS 116

Query: 289 GEMEKANKLWADMISRKISP-----------------NYISYGILINGYCSMGHVTEAFR 331
                AN L   ++ R+  P                 + + + +L+  Y     + +A  
Sbjct: 117 RLFWPANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVV 176

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +   M    + P + + + ++ G  +        E   + V+ GV PD  + + ++    
Sbjct: 177 IVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMC 236

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
             ++  +A   +  ME  G    ++TYNV++ G C+  R+ ++  +   +  KGL  D  
Sbjct: 237 ELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVV 296

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           TY TL+ G       +   +  DEM++ GF P +A
Sbjct: 297 TYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEA 331


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 266/482 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   ID A+ F C M + G+  D+ +YN L++  C  G ++EA    + M   G
Sbjct: 277 IMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHG 336

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYN+L  G    G    A++V+ +ML  GL+PD  TY TL+   C+  N+ EA 
Sbjct: 337 VEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEAL 396

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E   RG   +++ ++ L+    + G+++ AL  F EM++  L PD ++Y+I+I+G 
Sbjct: 397 KLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGL 456

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ GFV  A ++ ++M  K           +L GL +   ++EA + F+      +  D 
Sbjct: 457 CKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDV 516

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  +I G+ +   + +A+ L+  M ++ I P +VT+NTLI+GFC+ G++ +A K+   
Sbjct: 517 VLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEV 576

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + P+ ++Y  L+N YC +G++ E F   +EM    + PT V+   +IKG CR   
Sbjct: 577 IRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNK 636

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             ++ + L  M ++G+ PDS++YNT+I  F + + + KA  L + M      P  +TY V
Sbjct: 637 MHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKV 696

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C  G + D + ++  + ++ +   + TY T+I  H ++  + +A  + ++ML +G
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756

Query: 481 FV 482
           FV
Sbjct: 757 FV 758



 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 153/458 (33%), Positives = 252/458 (55%), Gaps = 1/458 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E++  G      T + LI+  C +  LE+A   ++  S K + P + + N++++  CK G
Sbjct: 227 EIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVG 285

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D A+     M++ GL  D+ +YN LL   C   +M EA     +M + GV PD+V+++
Sbjct: 286 LIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYN 345

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL   F   G +  A    ++M   GL PD V YT +I G+C+ G + EALK+R E L +
Sbjct: 346 TLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSR 405

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  ++V+ YN +L+ LC+   + EA  LF+EM    + PDF  ++ LIHG CK+G + +A
Sbjct: 406 GFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRA 465

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             L++ M  K   P       ++ G  K G + +A   +       +  + + Y I+I+G
Sbjct: 466 YQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG 525

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y  +  + EA +L+Y+M+ +GI P++V+ NT+I G+CR GD  +A + L  +  +G+ P 
Sbjct: 526 YVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPS 585

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            ++Y TL+N +    NM + F  + +ME   +VP  +TY V++ G CRQ +MH+S  +L 
Sbjct: 586 VVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLE 645

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            M  KGL PD  TY T+I        + +A + ++ ML
Sbjct: 646 YMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMML 683



 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 246/484 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC    +D A  F  +ME+ GV PD VTYNTL   +   G +  A +++  M  +G
Sbjct: 312 LLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQG 371

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + TY +LI G C+ G  + A ++  E L  G   +   YN LL   C+   + EA 
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM    + PD + +S LI    + G + RA   + +M+     P +     ++ G 
Sbjct: 432 TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGL 491

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG + EA    D       + DVV YN +++G  R   + EA  L+ +M+ERG+ P  
Sbjct: 492 FKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSV 551

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI+G C+ G++ +A  + +++  K + P +VTY TL++ +C+VG M++      +
Sbjct: 552 VTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHE 611

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  + P +++Y +LI G C    + E+ +L   M  KG+ P  V+ NTII+ +C+  +
Sbjct: 612 MEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKE 671

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA +  + M+    DP  ++Y  LIN      ++     +V  +E++ +    +TY  
Sbjct: 672 ITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMT 731

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+   C +G++  +     +M+ KG       Y+ +IN    +  + EA  F   ML  G
Sbjct: 732 IIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEG 791

Query: 481 FVPD 484
             PD
Sbjct: 792 VTPD 795



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 244/473 (51%), Gaps = 2/473 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +  A+  + +M  +G+ PD VTY TLI  +C+ G +EEA +L      +G K  V  YN 
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS-RR 129
           L++ LCK GR + A  + DEM  + L PD   Y+ L+   C++  +  A +++ +M  +R
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
                    + L+G+F +NG +  A  YF       L+ D VLY I+I+GY R   + EA
Sbjct: 477 KFPHHFAQRAVLLGLF-KNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEA 535

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           +++  +M+E+G    VVT+NT++NG CR   L EA  +   +  +G+ P   T+TTL++ 
Sbjct: 536 MQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNA 595

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           +C+ GNM +  +    M   ++ P  VTY  LI G C+  +M ++ +L   M ++ + P+
Sbjct: 596 YCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPD 655

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y  +I  +C    +T+A +L+  M+     PT V+   +I   C  GD    D  + 
Sbjct: 656 SVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVV 715

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            +    +    ++Y T+I     +  + KA    ++M  +G V  +  Y+ ++   C++G
Sbjct: 716 SIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRG 775

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            + +++     M+ +G+ PD     T++N    Q N    F F   +++ GF+
Sbjct: 776 LITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/453 (32%), Positives = 243/453 (53%), Gaps = 4/453 (0%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           + ++ L  AY R   + +A  ++  M     +  V TYNSL++ +      D   +V +E
Sbjct: 171 LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVYNE 227

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           +   G      T + L+   C +  + +A   F   S + V P IVS +T++  F + G 
Sbjct: 228 IKVSGAPQSECTTSILIHGLCEQSKLEDAIS-FLHDSNKVVGPSIVSINTIMSKFCKVGL 286

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D A  +F  M   GL+ D+  Y I+++G C  G + EAL   D+M + G   DVVTYNT
Sbjct: 287 IDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +  G     +++ A  +  +ML +G+ PD  T+TTLI GHC+ GN+ +AL L      + 
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            K +++ YN L+   CKVG +E+A  L+ +M + ++ P++I Y ILI+G C  G V  A+
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           +L+ +M  K   P   +   ++ G  ++G+ S+A  +        +  D + YN +I+G+
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
           VR + + +A  L  KM  +G+ P V+T+N ++ GFCR+G + ++  +L  +  KGL P  
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSV 586

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            TYTTL+N +    N++E F F  EM     VP
Sbjct: 587 VTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVP 619



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 211/412 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +I+ A     EME   + PD + Y+ LI+  C+EGF++ A+QL   M  K 
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  F   +++ GL K G    A+   D   +M L  D   YN ++    R + ++EA 
Sbjct: 477 KFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAM 536

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M  RG+ P +V+F+TLI  F R G L  A      ++  GLVP  V YT ++N Y
Sbjct: 537 QLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAY 596

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + E      EM     V   VTY  ++ GLCR   + E+  L   M  +G+ PD 
Sbjct: 597 CEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDS 656

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I   CK   + KAL L+++M   +  P  VTY  LI+  C  G+++  +++   
Sbjct: 657 VTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVS 716

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R I+   ++Y  +I  +C+ G V++A   + +M+ KG   ++   + +I   C+ G 
Sbjct: 717 IEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGL 776

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            ++A  F   M+SEGV PD     T++N F ++ N    F  ++ +   G +
Sbjct: 777 ITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 176/331 (53%), Gaps = 10/331 (3%)

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D  L  FR   S GLV D + +      Y R+  + +AL +  +M +      V TYN++
Sbjct: 157 DLLLEKFRNWDSNGLVWDMLAF-----AYSRHEMIHDALFVIAKMKDLNFQASVPTYNSL 211

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           L+ +    ++    D++NE+   G      T + LIHG C+   +  A++     + K +
Sbjct: 212 LHNMRHTDIMW---DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SNKVV 267

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P IV+ NT++  FCKVG ++ A   +  M+   +  +  SY IL++G C  G + EA  
Sbjct: 268 GPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALG 327

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
              +M   G++P +V+ NT+ KG+   G  S A + + KM+ +G++PD ++Y TLI G  
Sbjct: 328 FTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHC 387

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +  N+++A  L  +  ++G   +VI YN++L+  C+ GR+ ++  +   M    L PD  
Sbjct: 388 QMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFI 447

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEM-LQRGF 481
            Y+ LI+G   +  ++ A++ +++M L+R F
Sbjct: 448 VYSILIHGLCKEGFVQRAYQLYEQMRLKRKF 478


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 252/483 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN  CK   +  A++++ ++ Q G+  DT TY +LI  YCR   ++ A  +  SM  KG
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +Y +LI+G C+  R D A ++  +M +    P   TY  ++   C+    +EA 
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL 329

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ +   P++ +++ LI     +   D A      M   GL+P  V Y  +I+GY
Sbjct: 330 NMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGY 389

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    AL++   M    C  +  TYN ++ G CR K + +A  L ++MLER + P+ 
Sbjct: 390 CKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV 449

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LIHG CK+G++  A  L  +M +  + PD  TY+  ID  CK G +E+A  L+  
Sbjct: 450 VTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFES 509

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + I  N + Y  LI+GYC +G V++   L  +M+  G  P  ++ N++I GYC+  +
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   +  M+   ++P + +Y  LI+  ++++  D+A  +  +M + G  PDV  Y  
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  +C  GR+ D+E+++ +M  KG+ PD   YT  I+ +    ++  AF     M + G
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689

Query: 481 FVP 483
             P
Sbjct: 690 CEP 692



 Score =  267 bits (682), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 148/452 (32%), Positives = 234/452 (51%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN L+    R   ++E   +   M    + P +FT N+++NG CK G    A+  + +++
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           Q GLS DT TY +L++  CR +N+  A  IF  M  +G   + VS++ LI  F    ++D
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            AL  F +M      P    YT+II   C+ G   EAL M  EM EK C  +V TY  ++
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
             LC      +A  + N MLE+G+ P   T+  LI G+CK G    AL +  +M   +  
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+  TYN LI GFC+   + KA  L   M+ RK+ PN ++Y ILI+G C  G +  A++L
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
              M   G+ P   + +  I   C+ G   +A      +  +G+  + + Y+TLI+G+ +
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              +     L+ KM + G VP+ ITYN ++ G+C++    ++ L++  MI++ + P   T
Sbjct: 532 VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADT 591

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           YT LI+  +  +   +A    D+ML  G  PD
Sbjct: 592 YTILIDNLLKDDEFDQAHDMFDQMLSTGSHPD 623



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 159/513 (30%), Positives = 251/513 (48%), Gaps = 31/513 (6%)

Query: 1   MVNALCK-DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++ ALC+   K ++  MF  EM +K   P+  TY  LI + C +   ++A +++N M  K
Sbjct: 315 IIFALCQLGRKTEALNMFK-EMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEK 373

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL P V TYN+LI+G CKKG    A E+L  M     SP+  TYN L++  CR +N+ +A
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKA 433

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  +M  R + P++V+++ LI    + G L  A      M  +GLVPD   Y++ I+ 
Sbjct: 434 MSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDT 493

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G V EA  + + + EKG   + V Y+T+++G C+   +++   L ++ML  G  P+
Sbjct: 494 LCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPN 553

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ +LI G+CK+ N  +A  L DIM ++ I+P   TY  LID   K  E ++A+ ++ 
Sbjct: 554 SITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFD 613

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+S    P+   Y   I+ YCS G + +A  L  +M  KGI P  +     I  Y R G
Sbjct: 614 QMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFG 673

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLI--------------------------NGFV-- 391
               A   L +M   G +P   +Y+ LI                          N F   
Sbjct: 674 SIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNC 733

Query: 392 -REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            R  + +    L  KM   G  P+  TY   +TG C+ G +  +  +   M EKG +P+ 
Sbjct: 734 WRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNE 793

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             Y +L+          EA R+ D M++   +P
Sbjct: 794 DIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLP 826



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 238/507 (46%), Gaps = 29/507 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+D   D AK  L  M +KG+ P  VTYN LI+ YC++G    A ++++ M    
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN LI G C+     +A  +L +ML+  L P+  TYN L+   C++ ++  A 
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M+  G+ PD  ++S  I    + G ++ A   F  +K  G+  + V+Y+ +I+GY
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +   + D+ML  GCV + +TYN++++G C+ K   EA  L + M++R + P  
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAA 589

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI    KD   ++A ++FD M      PD+  Y   I  +C  G ++ A  L   
Sbjct: 590 DTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICK 649

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC---- 356
           M ++ I P+ + Y + I+ Y   G +  AF +   M   G +P+  + + +IK       
Sbjct: 650 MNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKP 709

Query: 357 -------------------------RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
                                    R  D     +   KM   G  P++ +Y   I G  
Sbjct: 710 KEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLC 769

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   ++ A  L   M+ +G  P+   YN +L   C+ G   ++   L  MIE    P   
Sbjct: 770 KVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLD 829

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           +   L+ G   + N ++A R     LQ
Sbjct: 830 SCKLLLCGLYDEGNDEKAKRVFCSFLQ 856



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 212/455 (46%), Gaps = 31/455 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+  + SA   L  M + G+ PD  TY+  I+  C+ G +EEA  L  S+  KG
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y++LI+G CK G+    + +LD+ML  G  P++ TYN+L+   C+++N  EA 
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M +R + P   +++ LI    ++ + D+A   F +M S G  PD  +YT  I+ Y
Sbjct: 575 LLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAY 634

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + +A  +  +M  KG + D + Y   ++   R   +  A  +   M E G  P +
Sbjct: 635 CSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSY 694

Query: 241 YTFTTLIHGHCKDGNMNKA------------------------------LNLFDIMTQKS 270
           YT++ LI  H  +    +                               L+LF  M +  
Sbjct: 695 YTYSCLIK-HLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHG 753

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
             P+  TY   I G CKVG +E A++L+  M  +  SPN   Y  L+   C +G   EA 
Sbjct: 754 CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAI 813

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           R    M+     P L SC  ++ G    G+  KA       +    + D + +  LI+G 
Sbjct: 814 RWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGL 873

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +++   DK   L   ME QG      TY++++ GF
Sbjct: 874 LKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 162/291 (55%)

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EML+     ++ T NT++NG C+   + EA+   +++++ G+  D +T+T+LI G+C++ 
Sbjct: 194 EMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNK 253

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
           N++ A  +F  M  K    + V+Y  LI GFC+   +++A KL++ M      P   +Y 
Sbjct: 254 NVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYT 313

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
           ++I   C +G  TEA  ++ EM  K  +P + +   +I   C   +   A + L+ M+ +
Sbjct: 314 VIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEK 373

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+ P  ++YN LI+G+ ++     A  ++S ME+    P+  TYN ++ GFCR   +H +
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKA 433

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             +L +M+E+ L P+  TY  LI+G   + +L  A++    M + G VPD+
Sbjct: 434 MSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDE 484



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 6/291 (2%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++A C   ++  A++ +C+M  KG+ PDT+ Y   I+AY R G ++ AF ++  M   G 
Sbjct: 631 IHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGC 690

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P  +TY+ LI  L       + KEV        LS   A+ +       R+ +     +
Sbjct: 691 EPSYYTYSCLIKHLSNA----KPKEVSSSSELSDLSSGVASND--FSNCWRRVDYEFTLD 744

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F +M+  G AP+  ++   I    + G L+ A   F  MK  G  P+  +Y  ++   C
Sbjct: 745 LFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSC 804

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G   EA++  D M+E   +  + +   +L GL       +A  +F   L+     D  
Sbjct: 805 QLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEM 864

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
            +  LI G  K G  +K  +LF IM  +  +    TY+ LI+GF  + E++
Sbjct: 865 VWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/475 (32%), Positives = 258/475 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  L +  +I  A   L EM +KG  P+ + YN LI+++   G L +A ++ + M  KG
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 384

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L     TYN+LI G CK G+ D A+ +L EML +G + +  ++ +++   C       A 
Sbjct: 385 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 444

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM  R ++P     +TLI    ++G+  +AL  + +  + G V D      +++G 
Sbjct: 445 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 504

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA +++ E+L +GCVMD V+YNT+++G C  K L EA    +EM++RG+ PD 
Sbjct: 505 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 564

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT++ LI G      + +A+  +D   +  + PD+ TY+ +IDG CK    E+  + + +
Sbjct: 565 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 624

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+ + PN + Y  LI  YC  G ++ A  L  +M  KGI P   +  ++IKG      
Sbjct: 625 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 684

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     +M  EG++P+   Y  LI+G+ +   M K   L+ +M ++ + P+ ITY V
Sbjct: 685 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 744

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           ++ G+ R G + ++  +L  M EKG+ PD  TY   I G++ Q  + EAF+  DE
Sbjct: 745 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799



 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 157/475 (33%), Positives = 257/475 (54%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           + D A MF  +M ++G+ P  +TY+ L+    R   + +A+ ++  M+ KG  P V  YN
Sbjct: 299 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 358

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +LI+   + G  ++A E+ D M+  GLS  ++TYNTL+   C+      AE +  EM   
Sbjct: 359 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 418

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G   +  SF+++I +   +   D AL +  EM    + P   L T +I+G C++G   +A
Sbjct: 419 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 478

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           L++  + L KG V+D  T N +L+GLC A  L EA  +  E+L RG   D  ++ TLI G
Sbjct: 479 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 538

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C    +++A    D M ++ +KPD  TY+ LI G   + ++E+A + W D     + P+
Sbjct: 539 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 598

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y ++I+G C      E    + EM+ K ++P  V  N +I+ YCRSG  S A E   
Sbjct: 599 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 658

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M  +G+ P+S +Y +LI G      +++A  L  +M  +GL P+V  Y  ++ G+ + G
Sbjct: 659 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 718

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +M   E +L  M  K ++P++ TYT +I G+    N+ EA R  +EM ++G VPD
Sbjct: 719 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 773



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 243/461 (52%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           KGV PD   + T INA+C+ G +EEA +L + M   G+ P V T+N++I+GL   GR D 
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 302

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A    ++M++ G+ P   TY+ L+    R + + +A  +  EM+++G  P+++ ++ LI 
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 362

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            F   G L++A+     M S GL   +  Y  +I GYC+NG    A ++  EML  G  +
Sbjct: 363 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 422

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +  ++ +++  LC   M   A     EML R + P     TTLI G CK G  +KAL L+
Sbjct: 423 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 482

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                K    D  T N L+ G C+ G++++A ++  +++ R    + +SY  LI+G C  
Sbjct: 483 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 542

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             + EAF    EMV +G+KP   + + +I G        +A +F       G+ PD  +Y
Sbjct: 543 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 602

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + +I+G  + E  ++      +M ++ + P+ + YN ++  +CR GR+  +  +   M  
Sbjct: 603 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 662

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           KG++P+ +TYT+LI G    + ++EA    +EM   G  P+
Sbjct: 663 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 703



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 234/469 (49%), Gaps = 7/469 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLE---EAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           +  KG++P   T N L+ +  R    +   EAF ++     KG+ P V+ + + IN  CK
Sbjct: 206 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGVSPDVYLFTTAINAFCK 261

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
            G+ + A ++  +M + G++P+  T+NT++          EA     +M  RG+ P +++
Sbjct: 262 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 321

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           +S L+   +R  ++  A    +EM   G  P+ ++Y  +I+ +   G + +A++++D M+
Sbjct: 322 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 381

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
            KG  +   TYNT++ G C+      A+ L  EML  G   +  +FT++I   C     +
Sbjct: 382 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 441

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            AL     M  +++ P      TLI G CK G+  KA +LW   +++    +  +   L+
Sbjct: 442 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 501

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G C  G + EAFR+  E++G+G     VS NT+I G C      +A  FL +MV  G+ 
Sbjct: 502 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 561

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD+ +Y+ LI G      +++A       +  G++PDV TY+V++ G C+  R  + +  
Sbjct: 562 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 621

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              M+ K + P+   Y  LI  +     L  A    ++M  +G  P+ A
Sbjct: 622 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 670


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 152/458 (33%), Positives = 258/458 (56%), Gaps = 1/458 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    +N ++++  +    + A      M  KG++P +FT+N LIN      + + A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           + ++L++G  PDT T NTLL   C    + EA      + R+    D VS+ TLI    +
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 148 NGQLDRALMYFREMKSAGLV-PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           +G+   AL   R+++   LV PD ++YT II+ +C++  V++A  +  EM+ K    +VV
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T+N+++ G C    L EA  L NEM    V P+ YTF  LI G CK+G + KA ++  +M
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++ ++P++VTY +L+DG+  V E+ KA  ++  +  R ++PN  SY ++ING C    V
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA +L+ EM  K + P  V+ +++I G C+SG  S   + + ++ + G   + I+YN+L
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSL 410

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           +NG  +   +DKA AL++KM+++G+ PD+ TY  ++ G C+ GR+ D++ I   ++ KG 
Sbjct: 411 LNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGY 470

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +   YT +ING   +    EA     +M   G +PD
Sbjct: 471 PLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPD 508



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 243/445 (54%), Gaps = 1/445 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N      +++ A   + ++ + G  PDTVT NTL+   C  G ++EA    + +  K 
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL-SPDTATYNTLLVESCRKENMSEA 119
                 +Y +LINGLCK G    A ++L ++  + L  PD   Y  ++   C+ + + +A
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDA 213

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++ EM  + + P++V+F++LI  F   GQL  A+    EM    + P+   + I+I+G
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G V +A  +   M+++G   +VVTY ++++G    K + +A  +FN +  RGV P+
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            ++++ +I+G CK+  +++A+ LF  M  K++ P+ VTY++LIDG CK G +     L  
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLID 393

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           ++ +R    N I+Y  L+NG C    V +A  L  +M  +GI+P + +  T++ G C++G
Sbjct: 394 EINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNG 453

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A      ++ +G   +   Y  +ING  +E   D+A +L+S+ME+ G +PD +TY 
Sbjct: 454 RLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYE 513

Query: 420 VILTGFCRQGRMHDSELILWRMIEK 444
            +++   +  +   +  +L  MI +
Sbjct: 514 TLISALFKNNKNGKAVKLLREMIAR 538



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 257/480 (53%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++L K +    A  F  +ME KG+ P+  T+N LIN +     L  AF ++  +   G
Sbjct: 59  ILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLG 118

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T N+L+ GLC  G+   A    D +++     D  +Y TL+   C+      A 
Sbjct: 119 YQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAAL 178

Query: 121 EIFCEMS-RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++  ++     V PD++ ++ +I  F ++  +  A   + EM    + P+ V +  +I G
Sbjct: 179 QLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYG 238

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C  G + EA+ + +EM       +V T+N +++GLC+   + +A  + + M+++GV P+
Sbjct: 239 FCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPN 298

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T+L+ G+     +NKA ++F+ ++ + + P++ +Y+ +I+G CK   +++A KL+ 
Sbjct: 299 VVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFK 358

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  + ++PN ++Y  LI+G C  G +++ + L  E+  +G    +++ N+++ G C++ 
Sbjct: 359 EMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNH 418

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              KA   L+KM  EG+ PD  +Y TL++G  +   +  A  +   +  +G   ++  Y 
Sbjct: 419 QVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYT 478

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++ G C++G   ++  +L +M + G  PD  TY TLI+     N   +A +   EM+ R
Sbjct: 479 VMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 215/378 (56%), Gaps = 1/378 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG-VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++N LCK  +  +A   L ++E    V PD + Y  +I+++C++  + +A+ L + M  K
Sbjct: 164 LINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK 223

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P V T+NSLI G C  G+   A  +L+EM    ++P+  T+N L+   C++  + +A
Sbjct: 224 KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKA 283

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +   M ++GV P++V++++L+  +    ++++A   F  +   G+ P+   Y+++ING
Sbjct: 284 TSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMING 343

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+N  V EA+K+  EM  K    + VTY+++++GLC++  +++  DL +E+  RG   +
Sbjct: 344 LCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPAN 403

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ +L++G CK+  ++KA+ L   M  + I+PD+ TY TL+DG CK G ++ A +++ 
Sbjct: 404 IITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQ 463

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           D++ +    N   Y ++ING C  G   EA  L  +M   G  P  V+  T+I    ++ 
Sbjct: 464 DLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNN 523

Query: 360 DASKADEFLSKMVSEGVD 377
              KA + L +M++   D
Sbjct: 524 KNGKAVKLLREMIARESD 541


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 162/483 (33%), Positives = 263/483 (54%), Gaps = 1/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ L K  K   A+     + +  + P+++TY  LI+ YC+ G +E    L+  M  K 
Sbjct: 349 LVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKH 408

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY+S+ING  KKG  D A  V+ +ML   + P+   Y  L+   C+      A 
Sbjct: 409 INPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIAT 468

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM   G+  + V F  L+    R  ++D A    +++ S GL+ D+V YT +++G+
Sbjct: 469 DLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGF 528

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    AL M +EM EK    DVVTYN ++NGL       EA  +++ M+E G+ P+ 
Sbjct: 529 FKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQ 587

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I  +CK G ++ AL L++ M    I P  +T NTL+ G  + GE+EKA  +  +
Sbjct: 588 ATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNE 647

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I PN + + +L+N     G      ++  ++V  G+K    + N +I  +CR   
Sbjct: 648 MSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRM 707

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L  M+ +G   D+++YN LI G+    ++ KA A  ++M N+G+ P+++TYN+
Sbjct: 708 TKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNL 767

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G    G M + + +  +M E GLNPD STY TLI+G+    N KE+ R + EM+ +G
Sbjct: 768 LLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQG 827

Query: 481 FVP 483
           FVP
Sbjct: 828 FVP 830



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 259/480 (53%), Gaps = 22/480 (4%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G   D + +NTLI+ YC+ G +  A  L+  M  +GL   + +YN+LING CK+G  D+A
Sbjct: 142 GTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKA 201

Query: 85  KEVLDEMLQ---------------------MGLSPDTATYNTLLVESCRKENMSEAEEIF 123
           K +L E+ +                     + L  D  TY T++   C++  + EA  ++
Sbjct: 202 KSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALY 261

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM   G  PD+V++S+++    ++G+L  A    REMK  G+ P++V YT +I+   + 
Sbjct: 262 EEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKA 321

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G   EA   + +++ +G  +D+V   T+++GL ++    EA+D+F  + +  + P+  T+
Sbjct: 322 GSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITY 381

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           T LI G+CK G+M +  +L   M +K I P+++TY+++I+G+ K G +++A  +   M+ 
Sbjct: 382 TALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLD 441

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           + I PN   Y ILI+GYC  G    A  L+ EM   G+K   V  + ++    R     +
Sbjct: 442 QNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDE 501

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A+E L  + S G+  D ++Y +L++GF +      A  +V +M  + +  DV+TYNV++ 
Sbjct: 502 AEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLIN 561

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G    G+ ++++ +   MIE GL P+++TY  +I  +  Q  L  A    +EM     +P
Sbjct: 562 GLLEHGK-YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMP 620



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/530 (29%), Positives = 269/530 (50%), Gaps = 48/530 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   ++  +  L EME+K + P+ +TY+++IN Y ++G L+EA  +M  M  + 
Sbjct: 384 LIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQN 443

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  + Y  LI+G CK G+ + A ++ +EM   GL  +   ++ L+    R + M EAE
Sbjct: 444 IIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAE 503

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +++ RG+  D V++++L+  F + G+   AL    EM    +  D V Y ++ING 
Sbjct: 504 ELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGL 563

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G   EA  +   M+E G   +  TYN ++   C+   L  A +L+NEM    + P  
Sbjct: 564 LEHG-KYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSS 622

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV------------------------ 276
            T  TL+ G  + G + KA+N+ + M+   I P++V                        
Sbjct: 623 ITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQ 682

Query: 277 -----------TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                       YN LI  FC++   +KA  +   MI      + ++Y  LI GYC   H
Sbjct: 683 LVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSH 742

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A   + +M+ +G+ P +V+ N ++ G   +G  ++ DE   KM   G++PD+ +Y+T
Sbjct: 743 VKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDT 802

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G+ +  N  ++  L  +M  QG VP   TYNV+++ F + G+M  +  +L  M  +G
Sbjct: 803 LISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRG 862

Query: 446 LNPDRSTYTTLING--HVSQN-----NLKEAFR-----FHDEMLQRGFVP 483
           + P  STY  LI G  ++S++      LK+ +R        EM  +GFVP
Sbjct: 863 VPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVP 912



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 245/450 (54%), Gaps = 13/450 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L +  ++D A+  L ++  +G+  D V Y +L++ + + G    A  ++  M+ K 
Sbjct: 489 LVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKS 548

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V TYN LINGL + G+ + AK V   M++MGL+P+ ATYN ++   C++  +  A 
Sbjct: 549 IPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNAL 607

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++ EM    + P  ++ +TL+   S  G++++A+    EM   G+ P+ V++ +++N  
Sbjct: 608 ELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNAS 667

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G     L+M +++++ G  ++   YN ++   CR +M  +A  +   M+  G   D 
Sbjct: 668 SKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADT 727

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G+C+  ++ KAL  +  M  + + P+IVTYN L+ G    G M + ++L+  
Sbjct: 728 VTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDK 787

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    ++P+  +Y  LI+GY  +G+  E+ RL+ EMV +G  P   + N +I  + + G 
Sbjct: 788 MKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGK 847

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFV---REENMDKAFA---------LVSKMEN 408
             +A E L++M   GV P S +Y+ LI G+    +  ++D+            L+++M +
Sbjct: 848 MDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMND 907

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +G VP   T   I + F R G+M D+E +L
Sbjct: 908 KGFVPCKSTIACISSTFARPGKMLDAEKLL 937



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 245/482 (50%), Gaps = 24/482 (4%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M +  + P  + +N LI  +   G + +   +   M    + P V+T+N L++  CK G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A   LD +  + +  DT TYNT++   C+   +++A      M ++    D ++ + 
Sbjct: 61  LILA---LDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  F R G           + S G   D + +  +I+GYC+ G +  AL + + M ++G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVF--------------------PD 239
            + D+V+YNT++NG C+     +A  L +E+ E RGV                      D
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TT+I  +CK   + +A  L++ M      PD+VTY+++++G CK G + +A +L  
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    + PN+++Y  LI+     G   EAF    ++V +G+   LV C T++ G  +S 
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSS 357

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A++    +    + P+SI+Y  LI+G+ +  +M++  +L+ +ME + + P+VITY+
Sbjct: 358 KPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYS 417

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            I+ G+ ++G + ++  ++ +M+++ + P+   Y  LI+G+      + A   ++EM   
Sbjct: 418 SIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLS 477

Query: 480 GF 481
           G 
Sbjct: 478 GL 479



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 239/486 (49%), Gaps = 24/486 (4%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM    V P+  T+N L++A+C+ G L  A  L+ ++    ++    TYN++I G C+ G
Sbjct: 35  EMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLLRNVD---VEVDTVTYNTVIWGFCQHG 91

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             ++A   L  M++     DT T N L+   CR       E I   +   G   D++ F+
Sbjct: 92  LVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFN 151

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TLI  + + G++  AL     M+  GL+ D V Y  +ING+C+ G   +A  +  E+ E 
Sbjct: 152 TLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISES 211

Query: 200 GCV---------------------MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
             V                      D++TY TI++  C+   L EA  L+ EM+  G  P
Sbjct: 212 RGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLP 271

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T++++++G CKDG +++A  L   M +  + P+ V Y TLID   K G   +A    
Sbjct: 272 DVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQ 331

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           + ++ R ++ + +    L++G        EA  ++  +    + P  ++   +I GYC+ 
Sbjct: 332 SQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKV 391

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           GD  + +  L +M  + ++P+ I+Y+++ING+ ++  +D+A  ++ KM +Q ++P+   Y
Sbjct: 392 GDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVY 451

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            +++ G+C+ G+   +  +   M   GL  +   +  L+N       + EA     ++  
Sbjct: 452 AILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTS 511

Query: 479 RGFVPD 484
           RG + D
Sbjct: 512 RGLLLD 517



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 200/387 (51%), Gaps = 13/387 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K + AK     M + G+ P+  TYN +I AYC++G L+ A +L N M    
Sbjct: 559 LINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHK 617

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T N+L+ GL + G  ++A  VL+EM  MG+ P+   +  LL  S +    +   
Sbjct: 618 IMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVL 677

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  ++   G+  +  +++ LI +F R     +A    + M   G V D V Y  +I GY
Sbjct: 678 QMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGY 737

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  V +AL    +ML +G   ++VTYN +L GL  A ++ E D+LF++M E G+ PD 
Sbjct: 738 CESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDA 797

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G+ K GN  +++ L+  M  +   P   TYN LI  F KVG+M++A +L  +
Sbjct: 798 STYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNE 857

Query: 301 MISRKISPNYISYGILINGYCSMG------------HVTEAFRLWYEMVGKGIKPTLVSC 348
           M  R + P+  +Y ILI G+C++             + T+A  L  EM  KG  P   + 
Sbjct: 858 MQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTI 917

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEG 375
             I   + R G    A++ L ++ S  
Sbjct: 918 ACISSTFARPGKMLDAEKLLKEIFSHA 944



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 157/310 (50%), Gaps = 24/310 (7%)

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M +   V  ++ +N ++       ++++  D++ EML   V P+ YT   L+H  CK GN
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +  AL   D++    ++ D VTYNT+I GFC+ G + +A    + M+ +    + I+  I
Sbjct: 61  LILAL---DLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           L+ G+C +G      R+   +V  G    ++  NT+I GYC++G+ S A + + +M  EG
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 376 VDPDSISYNTLINGFVREENMDKAFAL---------------------VSKMENQGLVPD 414
           +  D +SYNTLINGF +    DKA +L                     + K +N  L  D
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           +ITY  I++ +C+Q  + ++  +   MI  G  PD  TY++++NG      L EA     
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 475 EMLQRGFVPD 484
           EM + G  P+
Sbjct: 298 EMKKMGVDPN 307



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 3/222 (1%)

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M + +I P ++ +N LI  F   G + +   ++ +M+   + PN  ++ +L++ +C MG+
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  L   +    ++   V+ NT+I G+C+ G  ++A  FLS MV +    D+I+ N 
Sbjct: 61  LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+ GF R         ++  + + G   DVI +N ++ G+C+ G M  +  ++ RM ++G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           L  D  +Y TLING   +    +A     E+ +   V D  F
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVF 219


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/475 (32%), Positives = 258/475 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  L +  +I  A   L EM +KG  P+ + YN LI+++   G L +A ++ + M  KG
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L     TYN+LI G CK G+ D A+ +L EML +G + +  ++ +++   C       A 
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM  R ++P     +TLI    ++G+  +AL  + +  + G V D      +++G 
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA +++ E+L +GCVMD V+YNT+++G C  K L EA    +EM++RG+ PD 
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT++ LI G      + +A+  +D   +  + PD+ TY+ +IDG CK    E+  + + +
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+ + PN + Y  LI  YC  G ++ A  L  +M  KGI P   +  ++IKG      
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     +M  EG++P+   Y  LI+G+ +   M K   L+ +M ++ + P+ ITY V
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           ++ G+ R G + ++  +L  M EKG+ PD  TY   I G++ Q  + EAF+  DE
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810



 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 157/475 (33%), Positives = 257/475 (54%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           + D A MF  +M ++G+ P  +TY+ L+    R   + +A+ ++  M+ KG  P V  YN
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +LI+   + G  ++A E+ D M+  GLS  ++TYNTL+   C+      AE +  EM   
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G   +  SF+++I +   +   D AL +  EM    + P   L T +I+G C++G   +A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           L++  + L KG V+D  T N +L+GLC A  L EA  +  E+L RG   D  ++ TLI G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C    +++A    D M ++ +KPD  TY+ LI G   + ++E+A + W D     + P+
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y ++I+G C      E    + EM+ K ++P  V  N +I+ YCRSG  S A E   
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M  +G+ P+S +Y +LI G      +++A  L  +M  +GL P+V  Y  ++ G+ + G
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +M   E +L  M  K ++P++ TYT +I G+    N+ EA R  +EM ++G VPD
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784



 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 243/461 (52%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           KGV PD   + T INA+C+ G +EEA +L + M   G+ P V T+N++I+GL   GR D 
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A    ++M++ G+ P   TY+ L+    R + + +A  +  EM+++G  P+++ ++ LI 
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            F   G L++A+     M S GL   +  Y  +I GYC+NG    A ++  EML  G  +
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +  ++ +++  LC   M   A     EML R + P     TTLI G CK G  +KAL L+
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                K    D  T N L+ G C+ G++++A ++  +++ R    + +SY  LI+G C  
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             + EAF    EMV +G+KP   + + +I G        +A +F       G+ PD  +Y
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + +I+G  + E  ++      +M ++ + P+ + YN ++  +CR GR+  +  +   M  
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           KG++P+ +TYT+LI G    + ++EA    +EM   G  P+
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 234/469 (49%), Gaps = 7/469 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLE---EAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           +  KG++P   T N L+ +  R    +   EAF ++     KG+ P V+ + + IN  CK
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGVSPDVYLFTTAINAFCK 272

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
            G+ + A ++  +M + G++P+  T+NT++          EA     +M  RG+ P +++
Sbjct: 273 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 332

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           +S L+   +R  ++  A    +EM   G  P+ ++Y  +I+ +   G + +A++++D M+
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
            KG  +   TYNT++ G C+      A+ L  EML  G   +  +FT++I   C     +
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            AL     M  +++ P      TLI G CK G+  KA +LW   +++    +  +   L+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G C  G + EAFR+  E++G+G     VS NT+I G C      +A  FL +MV  G+ 
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD+ +Y+ LI G      +++A       +  G++PDV TY+V++ G C+  R  + +  
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              M+ K + P+   Y  LI  +     L  A    ++M  +G  P+ A
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  285 bits (729), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/475 (32%), Positives = 258/475 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  L +  +I  A   L EM +KG  P+ + YN LI+++   G L +A ++ + M  KG
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L     TYN+LI G CK G+ D A+ +L EML +G + +  ++ +++   C       A 
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM  R ++P     +TLI    ++G+  +AL  + +  + G V D      +++G 
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA +++ E+L +GCVMD V+YNT+++G C  K L EA    +EM++RG+ PD 
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT++ LI G      + +A+  +D   +  + PD+ TY+ +IDG CK    E+  + + +
Sbjct: 589 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 648

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+ + PN + Y  LI  YC  G ++ A  L  +M  KGI P   +  ++IKG      
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     +M  EG++P+   Y  LI+G+ +   M K   L+ +M ++ + P+ ITY V
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           ++ G+ R G + ++  +L  M EKG+ PD  TY   I G++ Q  + EAF+  DE
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823



 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 157/476 (32%), Positives = 257/476 (53%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           + D A MF  +M ++G+ P  +TY+ L+    R   + +A+ ++  M+ KG  P V  YN
Sbjct: 323 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 382

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +LI+   + G  ++A E+ D M+  GLS  ++TYNTL+   C+      AE +  EM   
Sbjct: 383 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 442

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G   +  SF+++I +   +   D AL +  EM    + P   L T +I+G C++G   +A
Sbjct: 443 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           L++  + L KG V+D  T N +L+GLC A  L EA  +  E+L RG   D  ++ TLI G
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C    +++A    D M ++ +KPD  TY+ LI G   + ++E+A + W D     + P+
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y ++I+G C      E    + EM+ K ++P  V  N +I+ YCRSG  S A E   
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M  +G+ P+S +Y +LI G      +++A  L  +M  +GL P+V  Y  ++ G+ + G
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +M   E +L  M  K ++P++ TYT +I G+    N+ EA R  +EM ++G VPD 
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 243/461 (52%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           KGV PD   + T INA+C+ G +EEA +L + M   G+ P V T+N++I+GL   GR D 
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A    ++M++ G+ P   TY+ L+    R + + +A  +  EM+++G  P+++ ++ LI 
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            F   G L++A+     M S GL   +  Y  +I GYC+NG    A ++  EML  G  +
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +  ++ +++  LC   M   A     EML R + P     TTLI G CK G  +KAL L+
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                K    D  T N L+ G C+ G++++A ++  +++ R    + +SY  LI+G C  
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             + EAF    EMV +G+KP   + + +I G        +A +F       G+ PD  +Y
Sbjct: 567 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + +I+G  + E  ++      +M ++ + P+ + YN ++  +CR GR+  +  +   M  
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           KG++P+ +TYT+LI G    + ++EA    +EM   G  P+
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 727



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 234/469 (49%), Gaps = 7/469 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLE---EAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           +  KG++P   T N L+ +  R    +   EAF ++     KG+ P V+ + + IN  CK
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGVSPDVYLFTTAINAFCK 285

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
            G+ + A ++  +M + G++P+  T+NT++          EA     +M  RG+ P +++
Sbjct: 286 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 345

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           +S L+   +R  ++  A    +EM   G  P+ ++Y  +I+ +   G + +A++++D M+
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
            KG  +   TYNT++ G C+      A+ L  EML  G   +  +FT++I   C     +
Sbjct: 406 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 465

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            AL     M  +++ P      TLI G CK G+  KA +LW   +++    +  +   L+
Sbjct: 466 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G C  G + EAFR+  E++G+G     VS NT+I G C      +A  FL +MV  G+ 
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD+ +Y+ LI G      +++A       +  G++PDV TY+V++ G C+  R  + +  
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              M+ K + P+   Y  LI  +     L  A    ++M  +G  P+ A
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  285 bits (729), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 264/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D       +M++  +     TYN LIN +CR   +  A  L+  M   G
Sbjct: 53  LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 112

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M++MG  PDT T+ TL+         SEA 
Sbjct: 113 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 172

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M +RG  P++V++  ++    + G  D AL    +M++A +  D V++  II+  
Sbjct: 173 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 232

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +AL +  EM  KG   +VVTY+++++ LC     ++A  L ++M+E+ + P+ 
Sbjct: 233 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 292

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI    K+G   +A  L+D M ++SI PDI TYN+L++GFC    ++KA +++  
Sbjct: 293 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 352

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+   P+ ++Y  LI G+C    V +   L+ EM  +G+    V+  T+I+G    GD
Sbjct: 353 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 412

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   +MVS+GV PD ++Y+ L++G      ++KA  +   M+   +  D+  Y  
Sbjct: 413 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 472

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ P+  TY T+I+G  S+  L+EA+    +M + G
Sbjct: 473 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 532

Query: 481 FVPD 484
            +P+
Sbjct: 533 PLPN 536



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 256/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  +I  A   L +M + G  P  VT ++L+N YC    + +A  L++ M   G
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+ +LI+GL    +   A  ++D M+Q G  P+  TY  ++   C++ +   A 
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M    +  D+V F+T+I    +   +D AL  F+EM++ G+ P+ V Y+ +I+  
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++  +M+EK    ++VT+N +++   +     EA+ L+++M++R + PD 
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +L++G C    ++KA  +F+ M  K   PD+VTYNTLI GFCK   +E   +L+ +
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 387

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  + ++Y  LI G    G    A +++ +MV  G+ P +++ + ++ G C +G 
Sbjct: 388 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 447

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E    M    +  D   Y T+I G  +   +D  + L   +  +G+ P+V+TYN 
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 507

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G C +  + ++  +L +M E G  P+  TY TLI  H+   +   +     EM    
Sbjct: 508 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 567

Query: 481 FVPD 484
           FV D
Sbjct: 568 FVGD 571



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 219/427 (51%)

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G+    G   Y  ++       + D A  +   M++    P    +N LL    + +   
Sbjct: 5   GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 64

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
               +  +M R  +   + +++ LI  F R  Q+  AL    +M   G  P  V  + ++
Sbjct: 65  VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 124

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NGYC    + +A+ + D+M+E G   D +T+ T+++GL      +EA  L + M++RG  
Sbjct: 125 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 184

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  +++G CK G+ + ALNL + M    I+ D+V +NT+ID  CK   ++ A  L
Sbjct: 185 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 244

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           + +M ++ I PN ++Y  LI+  CS G  ++A +L  +M+ K I P LV+ N +I  + +
Sbjct: 245 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 304

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A++    M+   +DPD  +YN+L+NGF   + +DKA  +   M ++   PDV+T
Sbjct: 305 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 364

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN ++ GFC+  R+ D   +   M  +GL  D  TYTTLI G     +   A +   +M+
Sbjct: 365 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 424

Query: 478 QRGFVPD 484
             G  PD
Sbjct: 425 SDGVPPD 431



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 4/233 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +++       EM  +G+  DTVTY TLI     +G  + A ++   M   G
Sbjct: 368 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 427

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY+ L++GLC  G+ ++A EV D M +  +  D   Y T++   C+   + +  
Sbjct: 428 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 487

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++FC +S +GV P++V+++T+I        L  A    ++MK  G +P++  Y  +I  +
Sbjct: 488 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 547

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            R+G    + ++  EM     V D  T   + N L   ++    D  F +ML 
Sbjct: 548 LRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL----DKSFLDMLS 596


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 162/520 (31%), Positives = 270/520 (51%), Gaps = 42/520 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK  K+D A      +  K V    V YN+L++ YC+ G +++  +L+  M    
Sbjct: 235 LIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECD 294

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN L+ G  +  R D A E+   +   G  P+ ATY T++      + M EA+
Sbjct: 295 NFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAK 354

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F E      A D++S++T+I   + + ++D A   F ++K+AG  P+ V YT +I+G 
Sbjct: 355 AFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGL 408

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + + LK  ++M    CV    TY  +++GLC+A+ML +A  +F +M+++G  PD 
Sbjct: 409 LKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDT 468

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV------------ 288
            T+TTLI G  K   M++A  L D+M  K  +P  VTY +++ GFCK+            
Sbjct: 469 ITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQ 528

Query: 289 -----------------------GEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                                  G  E+A ++  +M +R  +P+ I Y  LI+   S G 
Sbjct: 529 MRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 588

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V EA  ++  M+ KG  P  ++  TII+ + + G+   A E L  M   GV PD  +YN+
Sbjct: 589 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNS 648

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++G+V+ E +D+AF +  +M   G+ P+ +T+NV++ G  + G+   +  +   M+EK 
Sbjct: 649 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKD 708

Query: 446 -LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            + P   +YT LI+G      + EAF    EM+ RG +P+
Sbjct: 709 EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPE 748



 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/547 (29%), Positives = 260/547 (47%), Gaps = 63/547 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  KID A     EM   G  P  V+YNT+I+       ++EA++  NSM   G
Sbjct: 26  VLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNG 85

Query: 61  ----------------------------------LKPGVFTYNSLINGLCKKGRCDRAKE 86
                                              +P VF Y S+I+G CK G  D   +
Sbjct: 86  CEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFK 145

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           +L+EML  G  PD A Y  L+   C+   + EA E+F  M + G   D V+F TLI   S
Sbjct: 146 ILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALS 205

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
            +G+LD A   +REM   G  P   +   +I   C+ G V EA ++   ++ K      V
Sbjct: 206 NHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRV 265

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            YN++++G C+   + +   L  +M+E   FPD  T+  L+ G  +   ++ AL LF ++
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI--------------SRKI------ 306
           +    KP+  TY T+I G      ME+A   + + +              S++I      
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACEL 385

Query: 307 ---------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
                    SPN ++Y  +I+G    G + +  + + +M G    PT  +   +I G C+
Sbjct: 386 FEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCK 445

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +     A +   +MV +G  PD+I+Y TLI+GF +   MD+A  L+  M  +G  P  +T
Sbjct: 446 AQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVT 505

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y  I+ GFC+   +++++ ++ +M E+G  P    +T+L++ ++S+   +EA++   EM 
Sbjct: 506 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565

Query: 478 QRGFVPD 484
            RG  PD
Sbjct: 566 ARGCAPD 572



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 269/556 (48%), Gaps = 77/556 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  ++D     L +M +   +PD  TYN L+  + R   L++A +L   +S  G
Sbjct: 270 LMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYG 329

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP   TY ++I GL    R + AK   DE L      D  +Y T++      + + EA 
Sbjct: 330 CKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEAC 383

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F ++   G +P++V+++ +I    + G+++  L  F +M  +  VP    YT++I+G 
Sbjct: 384 ELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGL 443

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNT------------------------------ 210
           C+   + +A K+ ++M++KGCV D +TY T                              
Sbjct: 444 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 503

Query: 211 -----ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI------------------ 247
                I++G C+  M+ EA ++  +M ERG  P  + FT+L+                  
Sbjct: 504 VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 563

Query: 248 ---HGHCKD--------------GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
               G   D              G + +A ++FD M +K   PD +TY T+I  F K+G 
Sbjct: 564 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 623

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           +E A ++   M    + P+  +Y  L++GY  +  V +AF ++  MV  GIKP  V+ N 
Sbjct: 624 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 683

Query: 351 IIKGYCRSGDASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           ++ G  + G   +A     +M+ +  V P  +SY  LI+G  +   + +AF+   +M ++
Sbjct: 684 LMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDR 743

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G++P+  TY  ++    + GR+ +++ ++  M++ G+NPD   Y+ LI G +  + +  A
Sbjct: 744 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 803

Query: 470 FRFHDEMLQRGFVPDD 485
           +    EM++RG  P++
Sbjct: 804 WDVFQEMMKRGCAPNE 819



 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 233/438 (53%), Gaps = 1/438 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  +I+       +M      P   TY  +I+  C+   L +A ++   M  KG
Sbjct: 404 VIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 463

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY +LI+G  K  + D A+++LD ML  G  P   TY +++   C+ + ++EA+
Sbjct: 464 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M  RG  P +  F++L+  +   G+ + A     EM + G  PD +LYT +I+  
Sbjct: 524 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 583

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V EA  + D M+EKGC  D +TY TI+    +   +  A ++   M + GV PD 
Sbjct: 584 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 643

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + +L+ G+ K   +++A  ++D M    IKP+ VT+N L+ G  K G+ ++A  L+ +
Sbjct: 644 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 703

Query: 301 MISR-KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           M+ + ++ P  +SY ILI+G    G V+EAF  + EM+ +GI P   +  ++I    ++G
Sbjct: 704 MLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAG 763

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A + +  MV  GV+PD  +Y+ LI G +    +D A+ +  +M  +G  P+ +TY 
Sbjct: 764 RIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYK 823

Query: 420 VILTGFCRQGRMHDSELI 437
           V+  GF   GR  D E +
Sbjct: 824 VLRRGFRAAGRALDLEAV 841



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/475 (30%), Positives = 238/475 (50%), Gaps = 44/475 (9%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +EEA   +  M   GL P V   N ++NGLCK  + D+A E+  EM  MG  P   +YNT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ-------LDRALMYF 158
           ++      + M EA + F  M   G  PD+++F+TLI  F + GQ       L++AL  F
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
           R        PD  LYT +I+GYC+ G +    K+ +EML  GC+ D   Y  +++ LC+ 
Sbjct: 121 R--------PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKL 172

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
             + EA +LF  M + G   D+ TF TLI      G +++A  L+  M ++  +P +   
Sbjct: 173 GRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQ 232

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           ++LI   CK G++++AN+++  ++++K++ + ++Y  L++GYC +G V +  +L  +MV 
Sbjct: 233 DSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVE 292

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP-------------------- 378
               P + + N ++ G+ R+     A E    + S G  P                    
Sbjct: 293 CDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEE 352

Query: 379 ---------DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
                    D ISY T+I G    + +D+A  L  K++  G  P+V+ Y  ++ G  + G
Sbjct: 353 AKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           R+ D       M      P R+TYT +I+G      L +A +  ++M+Q+G VPD
Sbjct: 413 RIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD 467



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 235/460 (51%), Gaps = 1/460 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    +ID A     +++  G  P+ V Y  +I+   + G +E+  +    MSG  
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS 428

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY  +I+GLCK      A +V ++M+Q G  PDT TY TL+    +   M EA 
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 488

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M  +G  P  V++ +++  F +   ++ A     +M+  G  P   ++T +++ Y
Sbjct: 489 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G   EA ++  EM  +GC  DV+ Y ++++ L     + EA  +F+ M+E+G  PD 
Sbjct: 549 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 608

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I    K GN+  A  + ++M +  + PD   YN+L+DG+ K+  +++A  ++  
Sbjct: 609 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 668

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG-IKPTLVSCNTIIKGYCRSG 359
           M++  I PN +++ +L++G    G    AF L+ EM+ K  + PTLVS   +I G  ++G
Sbjct: 669 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAG 728

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S+A     +M+  G+ P+  +Y +LI    +   + +A  LV  M   G+ PDV  Y+
Sbjct: 729 RVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 788

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            ++TG      +  +  +   M+++G  P+  TY  L  G
Sbjct: 789 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 828


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 148/418 (35%), Positives = 248/418 (59%), Gaps = 6/418 (1%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           AF L   M    L     T+N ++  LC  G+  RA E+L +M +    P+  TYNT++ 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 109 ESCRKENMSEAEEIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
             C +  +  A +I  EM  RG +AP+  ++ T+I  + + G++D A+  F EM + G V
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 168 -PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            P+ V+Y  +I GYC  G +  AL  RD M+E+G  M V TYN +++ L      TEA +
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L  EM  +G+ PD +T+  LI+GHCK+GN+ KAL +F+ M+++ ++  +VTY +LI    
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G++++ +KL+ + + R I P+ + Y  LIN + + G++  AF +  EM  K I P  V
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 320

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + NT+++G C  G   +A + + +M   G+ PD ++YNTLI+G+  + ++  A  + ++M
Sbjct: 321 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 380

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            N+G  P ++TYN ++ G C+ G+  D+E ++  M+E G+ PD STY +LI G  +++
Sbjct: 381 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 438



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 142/396 (35%), Positives = 219/396 (55%), Gaps = 6/396 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           M+  LC   K   A   L +M +    P+ VTYNT+I  +C  G ++ A  +M  M  + 
Sbjct: 47  MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 102

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSE 118
           G+ P  +TY ++I+G CK GR D A +V DEML  G + P+   YN L+   C +  +  
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A      M  RGVA  + +++ L+     +G+   A     EM   GL PD   Y I+IN
Sbjct: 163 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 222

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+ G V +AL++ + M  +G    VVTY +++  L +   + E D LF+E + RG+ P
Sbjct: 223 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 282

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +  LI+ H   GN+++A  +   M +K I PD VTYNTL+ G C +G +++A KL 
Sbjct: 283 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R I P+ ++Y  LI+GY   G V +A R+  EM+ KG  PTL++ N +I+G C++
Sbjct: 343 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 402

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           G    A+  + +MV  G+ PD  +Y +LI G   E+
Sbjct: 403 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 438



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 215/399 (53%), Gaps = 6/399 (1%)

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +M ++ L   T T+N +L   C     + A E+  +M R    P+ V+++T+I  F   G
Sbjct: 31  DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG 86

Query: 150 QLDRALMYFREMKS-AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVT 207
           ++  AL   REM+   G+ P+   Y  +I+G+C+ G V EA+K+ DEML KG V  + V 
Sbjct: 87  RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 146

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ G C    L  A    + M+ERGV     T+  L+H    DG   +A  L + M 
Sbjct: 147 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 206

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K + PD+ TYN LI+G CK G ++KA +++ +M  R +    ++Y  LI      G V 
Sbjct: 207 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 266

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           E  +L+ E V +GI+P LV  N +I  +  SG+  +A E + +M  + + PD ++YNTL+
Sbjct: 267 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 326

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G      +D+A  L+ +M  +G+ PD++TYN +++G+  +G + D+  I   M+ KG N
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 386

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P   TY  LI G        +A     EM++ G  PDD+
Sbjct: 387 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 425


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 159/523 (30%), Positives = 261/523 (49%), Gaps = 39/523 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC++ ++D A   L    + G  PD VTYN  I+  C+   +++AFQL+  M  K 
Sbjct: 47  VINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 106

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY +L++GL K GR D A  +L++M++ G SP   TY  ++    +   + EA 
Sbjct: 107 CLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEAR 166

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK----SAGLVPDNVLYTII 176
            IF +M   G  PD   ++ LI   ++ G+LD AL+Y  +M     + G+ PD V++ ++
Sbjct: 167 RIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLV 226

Query: 177 INGYCRNGFVLEALKMRDE----------------------------------MLEKGCV 202
           I   C +G + +AL   DE                                  M E+ C 
Sbjct: 227 IRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCF 286

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
             + TY ++++G  +   L EA     E +ERG  PD  T+T++I G CK G + +    
Sbjct: 287 PTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 346

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  M  +  +PD VTY  LIDGF K   + KA++++  M+      + ++Y I+++G C 
Sbjct: 347 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 406

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V EA+  +  M  +G   T+V+ + ++ G+C  G+ S A E   +M+  G +P+ +S
Sbjct: 407 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 466

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC-RQGRMHDSELILWRM 441
           YN +I G  R   + KA+    K+  + L PDV T+N  L G C R   + D   +   M
Sbjct: 467 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESM 526

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + +G +P+  +Y+ L++G      L+       EM+ RG  PD
Sbjct: 527 VSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPD 569



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 258/488 (52%), Gaps = 8/488 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  ++D A + L EM      PD V +  +IN  CRE  L+EAF ++      G
Sbjct: 15  LLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TYN  I+GLCK  R D A ++L +M +    P T TY  L+    +   + EA 
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M  +G +P + +++ +I   S+ G+++ A   F +M   G  PD  +YT +I+G 
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191

Query: 181 CRNGFVLEALKMRDEMLEKGCVM----DVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
            + G + EAL   ++M+E GC      DVV +N ++  LC +  L +A   F+E L+  +
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-LDDSL 250

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
               +TF  L+   CK     +A+     M+++   P + TY +L+DGF K+G +++A  
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
              + + R   P+ ++Y  +I+G C +G V E    ++EM  +G +P  V+   +I G+ 
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           ++    KA     +M+  G    +++YN +++G  +   + +A+A    ME +G V  V+
Sbjct: 371 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 430

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY+ ++ GFC +G +  +  +  RM+++G  P+  +Y  +I G      L +A+ + +++
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 490

Query: 477 LQRGFVPD 484
           LQR   PD
Sbjct: 491 LQRRLCPD 498



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 260/522 (49%), Gaps = 40/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ L K  ++D A   L +M +KG  P   TY  +I+   + G +EEA ++   M G G
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ----MGLSPDTA--------------- 101
            +P  F Y +LI+GL K G+ D A   L++M++     G+ PD                 
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNL 236

Query: 102 -------------------TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
                              T+N L+   C+ E   EA     +MS R   P + ++++L+
Sbjct: 237 EDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLV 296

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F + G+LD AL+  +E    G +PD V YT II+G C+ G V E  +   EM  +G  
Sbjct: 297 DGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 356

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D VTY  +++G  +AKM+ +A  ++ +ML+ G      T+  ++ G CK G + +A   
Sbjct: 357 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 416

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  M ++     +VTY+ L+DGFC  G +  A +L+  M+ R   PN +SY I+I G C 
Sbjct: 417 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 476

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD-ASKADEFLSKMVSEGVDPDSI 381
            G + +A+  + +++ + + P + + N+ + G C+  D      E    MVS+G  P+  
Sbjct: 477 AGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLH 536

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           SY+ L++G  R   ++    +  +M ++G+ PDV+ +N ++   C  GR+ D  L ++R 
Sbjct: 537 SYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRV-DEALEVFRE 595

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +E+   PD  +Y +L++       ++EA      M  +G  P
Sbjct: 596 LERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 222/454 (48%), Gaps = 41/454 (9%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
            +L+NGLCK G+ DRA  +LDE   M  SPD   +  ++   CR++ + EA  +     R
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDE---MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G  PD V+++  I    +  ++D A    ++M     +P  V YT +++G  + G + E
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A+ + ++M+EKG    + TY  +++GL +A  + EA  +F +ML  G  PD + +T LI 
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 249 GHCKDGNMNKALNLFDIMTQ----KSIKPDIV---------------------------- 276
           G  K G +++AL   + M +    + ++PD+V                            
Sbjct: 190 GLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDS 249

Query: 277 ------TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
                 T+N L+   CK    E+A      M  R+  P   +Y  L++G+  +G + EA 
Sbjct: 250 LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEAL 309

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
               E V +G  P  V+  +II G C+ G   +  E   +M + G +PD+++Y  LI+GF
Sbjct: 310 LQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGF 369

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
           ++ + + KA  +  +M   G V   +TYN+IL G C+ GR+ ++      M E+G     
Sbjct: 370 MKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATV 429

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TY+ L++G  S+ N+  A      ML RG  P+
Sbjct: 430 VTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 463



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 166/346 (47%), Gaps = 37/346 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+   K  ++D A + L E  ++G  PD VTY ++I+  C+ G +EE  +  + M  +G
Sbjct: 295 LVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 354

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TY +LI+G  K     +A  V  +MLQ G    T TYN +L   C+   ++EA 
Sbjct: 355 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 414

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M  RG    +V++S L+  F   G +  A+  FR M   G  P+ V Y III G 
Sbjct: 415 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 474

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC------------------------ 216
           CR G + +A    +++L++    DV T+N+ L+GLC                        
Sbjct: 475 CRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPN 534

Query: 217 ------------RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
                       RA  L    ++F+EM+ RGV PD   F TLI   C  G +++AL +F 
Sbjct: 535 LHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFR 594

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
            + ++S  PD  +Y +L+D   +   ME+A  L   M  +  +P +
Sbjct: 595 ELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPRH 639



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 153/321 (47%), Gaps = 41/321 (12%)

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           ++D      +LNGLC+   L  A  L +EM      PD   FT +I+G C++  +++A +
Sbjct: 6   LVDTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFS 62

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           + +   +   +PD VTYN  IDG CK   ++ A +L   M  +K  P  ++Y  L++G  
Sbjct: 63  VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G + EA  +  +MV KG  PTL +   +I G  ++G   +A      M+  G  PD+ 
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182

Query: 382 SYNTLINGFVREENMDKAFALVSKM-EN---QGLVPDVITYNVILTGFCRQGRMHDS--- 434
            Y  LI+G  +   +D+A   +++M EN   +G+ PDV+ +N+++   C  G + D+   
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 435 -----------------------------ELILW--RMIEKGLNPDRSTYTTLINGHVSQ 463
                                        E I +  +M E+   P   TYT+L++G +  
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
             L EA     E ++RGF+PD
Sbjct: 303 GRLDEALLQLKEAVERGFIPD 323


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 260/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK    D A+    +M   GV P+  TYN LI+ Y   G  +E  +++  MS  G
Sbjct: 244 VIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGG 303

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP   TY SL+N LCK GRC  A+   D M+  G+ P   TY  +L     K  +SE  
Sbjct: 304 PKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMH 363

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M   G++P+   F+     +++ G +D+A+  F +M+  GL PD V Y  +I+  
Sbjct: 364 DLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDAL 423

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A    ++M+ +G   D+V +++++ GLC      + ++LF EML  G+ P+ 
Sbjct: 424 CKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNI 483

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F T++   CK+G + +   L D +    ++PD+++YNTLIDG C  G +++A+KL   
Sbjct: 484 VFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEG 543

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+  SY  L++GYC  G +  A+  + +M+  GI P +V+ NTI+ G  ++  
Sbjct: 544 MVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR 603

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A E    M++ G   D  +YN ++NG  +   +D+A  +   + ++GL  ++IT+N+
Sbjct: 604 FSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNI 663

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  D+  +   +   GL  +  TY  ++   + + +L+E       M + G
Sbjct: 664 MIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723

Query: 481 FVPD 484
             P+
Sbjct: 724 TAPN 727



 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 253/484 (52%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++N LC   ++  A  + L  M + G  PDTV+YN L+   C E   EEA +L++ M+  
Sbjct: 135 LLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADD 194

Query: 60  GL---KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            +    P V +Y+++ING   +G+ D+   +  EM+  G+ PD  TY T++   C+ +  
Sbjct: 195 QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLF 254

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             AE +F +M   GV P+I +++ LI  +   G+    +    EM + G  P+   Y  +
Sbjct: 255 DRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSL 314

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           +N  C+NG   EA    D M+ KG    V TY  +L+G      L+E  DL N M+  G+
Sbjct: 315 LNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGI 374

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+ + F      + K G ++KA+++F+ M Q+ + PD V+Y  LID  CK+G ++ A  
Sbjct: 375 SPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEV 434

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
            +  MI+  ++P+ + +  L+ G C++    +   L++EM+  GI P +V  NTI+   C
Sbjct: 435 KFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLC 494

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G   +    +  +   GV PD ISYNTLI+G      +D+A  L+  M + GL PD  
Sbjct: 495 KEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSF 554

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +YN +L G+C+ GR+  +     +M+  G+ P   TY T+++G        EA   +  M
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614

Query: 477 LQRG 480
           +  G
Sbjct: 615 INSG 618



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 243/484 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N    + ++D       EM  +G+ PD VTY T+I+  C+    + A  +   M   G
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP + TYN LI+G    G+      +L+EM   G  P+  TY +LL   C+     EA 
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M  +G+ P + ++  ++  ++  G L         M + G+ P++ ++ I  + Y
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + +A+ + ++M ++G   D V+Y  +++ LC+   + +A+  FN+M+  GV PD 
Sbjct: 389 AKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI 448

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F++L++G C      K   LF  M    I P+IV +NT++   CK G + +  +L   
Sbjct: 449 VVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDS 508

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+ ISY  LI+G+C  G + EA +L   MV  G+KP   S NT++ GYC++G 
Sbjct: 509 IECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGR 568

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     KM+S G+ P  ++YNT+++G  + +   +A  L   M N G   D+ TYN+
Sbjct: 569 IDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNI 628

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL G C+   + ++  +   +  KGL  +  T+  +I   +     ++A      +   G
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 688

Query: 481 FVPD 484
            V +
Sbjct: 689 LVQN 692



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 251/499 (50%), Gaps = 28/499 (5%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID A     +M Q+G+ PD V+Y  LI+A C+ G +++A    N M  +G+ P +  ++S
Sbjct: 394 IDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSS 453

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+ GLC   + ++ +E+  EML +G+ P+   +NT+L   C++  + E + +   +   G
Sbjct: 454 LVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMG 513

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           V PD++S++TLI      G +D A      M S GL PD+  Y  +++GYC+ G +  A 
Sbjct: 514 VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAY 573

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
               +ML  G    VVTYNTIL+GL + K  +EA +L+  M+  G   D YT+  +++G 
Sbjct: 574 SHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGL 633

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK   +++A+ +F  +  K ++ +I+T+N +I    K G  E A  L+A + +  +  N 
Sbjct: 634 CKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNV 693

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y +++      G + E   L+  M   G  P     N +++     GD S+A  +LSK
Sbjct: 694 VTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK 753

Query: 371 MVSEGVDPDSISYNTLINGFVREE----------------------------NMDKAFAL 402
           +       ++ + + LI+ F  +E                             +D A++L
Sbjct: 754 LDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSL 813

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M  +GL PDV+TYN IL G  + GR  +++ +   MI      +  TY  ++NG   
Sbjct: 814 FREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCK 873

Query: 463 QNNLKEAFRFHDEMLQRGF 481
            N + EAF+    +  +G 
Sbjct: 874 SNCVDEAFKMFQSLCSKGL 892



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 247/497 (49%), Gaps = 39/497 (7%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P+  TY+ LI  +CR G LE  F     +   G +      N L+NGLC   R   A 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 86  EVL-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV---APDIVSFSTL 141
           +VL   M ++G  PDT +YN LL   C ++   EA E+   M+   V    P++VS+ST+
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR------------------- 182
           I  F   GQ+D+    F EM   G+ PD V YT +I+G C+                   
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 183 -----------NGFVL-----EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
                      +G++      E ++M +EM   G   +  TY ++LN LC+     EA  
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
            F+ M+ +G+ P   T+  ++HG+   G +++  +L ++M    I P+   +N     + 
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G ++KA  ++  M  + +SP+ +SYG LI+  C +G V +A   + +M+ +G+ P +V
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIV 449

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
             ++++ G C      K +E   +M++ G+ P+ + +NT++    +E  + +   LV  +
Sbjct: 450 VFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSI 509

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           E  G+ PDVI+YN ++ G C  G + ++  +L  M+  GL PD  +Y TL++G+     +
Sbjct: 510 ECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRI 569

Query: 467 KEAFRFHDEMLQRGFVP 483
             A+    +ML  G  P
Sbjct: 570 DSAYSHFRKMLSNGITP 586



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 222/453 (49%), Gaps = 49/453 (10%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLV----ESCRKENMSEAEEI---FCEMSRR---GVAP 133
           A ++ DE+L          +N LL      S R+   SE+E +   F  M R     VAP
Sbjct: 33  ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAP 92

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK-M 192
           +  ++S LIG F R G L+     F  +   G   D+++   ++NG C    V EA+  +
Sbjct: 93  NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF---PDFYTFTTLIHG 249
              M E GC+ D V+YN +L GLC  K   EA +L + M +  V+   P+  +++T+I+G
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
              +G ++K  NLF  M  + I PD+VTY T+IDG CK    ++A  ++  MI   + PN
Sbjct: 213 FFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPN 272

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEM--------------------------------- 336
             +Y  LI+GY S+G   E  R+  EM                                 
Sbjct: 273 IDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFD 332

Query: 337 --VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
             +GKGIKP++ +   ++ GY   G  S+  + L+ MV+ G+ P+   +N   + + +  
Sbjct: 333 SMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCG 392

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            +DKA  + +KM  QGL PD ++Y  ++   C+ GR+ D+E+   +MI +G+ PD   ++
Sbjct: 393 IIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFS 452

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           +L+ G  + +  ++      EML  G  P+  F
Sbjct: 453 SLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVF 485



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 248/540 (45%), Gaps = 63/540 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTY--------------------------- 33
           ++N LCK+ +   A+ F   M  KG+ P   TY                           
Sbjct: 314 LLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANG 373

Query: 34  --------NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                   N   +AY + G +++A  + N M  +GL P   +Y +LI+ LCK GR D A+
Sbjct: 374 ISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAE 433

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
              ++M+  G++PD   +++L+   C  +   + EE+F EM   G+ P+IV F+T++   
Sbjct: 434 VKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNL 493

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G++         ++  G+ PD + Y  +I+G+C  G + EA K+ + M+  G   D 
Sbjct: 494 CKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDS 553

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            +YNT+L+G C+A  +  A   F +ML  G+ P   T+ T++HG  +    ++A  L+  
Sbjct: 554 FSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 613

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M     K DI TYN +++G CK   +++A K++ ++ S+ +  N I++ I+I      G 
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +A  L+  +   G+   +V+   +++     G   + D   S M   G  P+S   N 
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC------------------- 426
           L+   +   ++ +A A +SK++ +    +  T +++++ F                    
Sbjct: 734 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN 793

Query: 427 ---------RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
                    +  R+ D+  +   M+ KGL PD  TY T+++G        EA   +  M+
Sbjct: 794 EANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 853



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 248/496 (50%), Gaps = 28/496 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC   K +  +    EM   G++P+ V +NT++   C+EG + E  +L++S+   G
Sbjct: 454 LVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMG 513

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V +YN+LI+G C  G  D A ++L+ M+ +GL PD+ +YNTLL   C+   +  A 
Sbjct: 514 VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAY 573

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M   G+ P +V+++T++    +  +   A   +  M ++G   D   Y II+NG 
Sbjct: 574 SHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGL 633

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  V EA+KM   +  KG  ++++T+N ++  L +     +A DLF  +   G+  + 
Sbjct: 634 CKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNV 693

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++    ++G++ +  +LF  M +    P+    N L+      G++ +A    + 
Sbjct: 694 VTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK 753

Query: 301 MISRKISPNYISYGILINGYCS----------------------------MGHVTEAFRL 332
           +  R  S    +  +LI+ + S                               + +A+ L
Sbjct: 754 LDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSL 813

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + EM+ KG+ P +V+ NTI+ G  ++G  S+A E    M++     +  +YN ++NG  +
Sbjct: 814 FREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCK 873

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              +D+AF +   + ++GL  ++IT+N+++    + GR  D+  +   +   GL PD  T
Sbjct: 874 SNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVT 933

Query: 453 YTTLINGHVSQNNLKE 468
           Y  +    + + +L+E
Sbjct: 934 YRLVAENLIEEGSLEE 949



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 242/505 (47%), Gaps = 28/505 (5%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LCK+ ++   +  +  +E  GV PD ++YNTLI+ +C  G ++EA +L+  M   GLKP 
Sbjct: 493 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
            F+YN+L++G CK GR D A     +ML  G++P   TYNT+L    + +  SEA+E++ 
Sbjct: 553 SFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 612

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            M   G   DI +++ ++    ++  +D A+  F+ + S GL  + + + I+I    + G
Sbjct: 613 NMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGG 672

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
              +A+ +   +   G V +VVTY  ++  L     L E D LF+ M + G  P+     
Sbjct: 673 RKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 732

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC------------------ 286
            L+      G++++A      + +++   +  T + LI  F                   
Sbjct: 733 ALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRIL 792

Query: 287 ----------KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
                     K   ++ A  L+ +M+ + ++P+ ++Y  +++G    G  +EA  L+  M
Sbjct: 793 NEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSM 852

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           +    +  + + N I+ G C+S    +A +    + S+G+  + I++N +I   ++    
Sbjct: 853 INSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRK 912

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           + A  L + +   GLVPDV+TY ++      +G + + + +   M + G   D      L
Sbjct: 913 EDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNAL 972

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGF 481
           +   + + ++  A  +  ++ ++ F
Sbjct: 973 VRRLLQRGDISRAGAYLSKLDEKNF 997



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 204/434 (47%), Gaps = 30/434 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ L +  +   AK     M   G   D  TYN ++N  C+   ++EA ++  ++  KG
Sbjct: 594  ILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKG 653

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEA 119
            L+  + T+N +I  L K GR + A ++   +   GL  +  TY  L+VE+  +E ++ E 
Sbjct: 654  LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYR-LVVENLIEEGSLEEF 712

Query: 120  EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK----SAGLVPDNVLYTI 175
            + +F  M + G AP+    + L+      G + RA  Y  ++     S      ++L +I
Sbjct: 713  DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISI 772

Query: 176  ------------------IINGYCRNGFVLEALKMRD------EMLEKGCVMDVVTYNTI 211
                              I+N    +  + +A ++ D      EML KG   DVVTYNTI
Sbjct: 773  FSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTI 832

Query: 212  LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
            L+GL +    +EA +L+  M+      + YT+  +++G CK   +++A  +F  +  K +
Sbjct: 833  LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892

Query: 272  KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            + +I+T+N +I    K G  E A  L+A + +  + P+ ++Y ++       G + E   
Sbjct: 893  QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDG 952

Query: 332  LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
            L+  M   G        N +++   + GD S+A  +LSK+  +    ++ + + LI+ F 
Sbjct: 953  LFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFS 1012

Query: 392  REENMDKAFALVSK 405
            R E    A +L  K
Sbjct: 1013 RGEYQHHAKSLPEK 1026


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 260/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +D A+ FL +M  K V P+  TYN LI  Y   G  +EA ++   M    
Sbjct: 273 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 332

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T + L+  LCK G+   A++V D M   G +PD  +YN +L     K  + +  
Sbjct: 333 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 392

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   G+APD  +F+ LI  ++  G LD+A++ F EM+  G+ PD V Y  +I   
Sbjct: 393 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 452

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A++  ++M+++G   D   YN ++ G C    L +A +L +E++  G+  D 
Sbjct: 453 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 512

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F+++I+  CK G +  A N+FD+     + PD V Y+ L+DG+C VG+MEKA +++  
Sbjct: 513 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 572

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I PN + Y  L+NGYC +G + E   L+ EM+ +GIKP+ +  + II G  ++G 
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M   G+  D  +YN ++ G  +    D+A  L  ++    +  ++IT N 
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 692

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  +  R+ +++ +   +    L P+  TY+ +I   + +  ++EA      M   G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752

Query: 481 FVPD 484
             P+
Sbjct: 753 CEPN 756



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 264/488 (54%), Gaps = 5/488 (1%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++   C+  + D A  + L    + G  PD  +Y+ L+ + C +G   +A  L+  M+  
Sbjct: 165 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 224

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V  YN++I+G  K+G  ++A ++  EM+Q G+ PD  TYN+++   C+   M 
Sbjct: 225 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 284

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +AE    +M  + V P+  +++ LI  +S  GQ   A+  F+EM+   ++PD V  ++++
Sbjct: 285 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 344

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
              C+ G + EA  + D M  KG   DV +YN +LNG      L +  DLF+ ML  G+ 
Sbjct: 345 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 404

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PDFYTF  LI  +   G ++KA+ +F+ M    +KPD+VTY T+I   C++G+M+ A + 
Sbjct: 405 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 464

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  MI + ++P+  +Y  LI G+C+ G + +A  L  E++  G+   +V  ++II   C+
Sbjct: 465 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 524

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G    A       V+ G+ PD++ Y+ L++G+     M+KA  +   M + G+ P+V+ 
Sbjct: 525 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 584

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA-FRFHDEM 476
           Y  ++ G+C+ GR+ +   +   M+++G+ P    Y+ +I+G         A  +FH EM
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFH-EM 643

Query: 477 LQRGFVPD 484
            + G   D
Sbjct: 644 TESGIAMD 651



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 244/478 (51%), Gaps = 2/478 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY--PDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++ +LC   K   A   L  M + G    P+ V YNT+I+ + +EG + +A  L   M  
Sbjct: 201 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 260

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G+ P + TYNS+++ LCK    D+A+  L +M+   + P+  TYN L+          E
Sbjct: 261 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 320

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F EM R  + PD+V+ S L+G   + G++  A   F  M   G  PD   Y I++N
Sbjct: 321 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 380

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G +++   + D ML  G   D  T+N ++       ML +A  +FNEM + GV P
Sbjct: 381 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 440

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+ T+I   C+ G M+ A+  F+ M  + + PD   YN LI GFC  G + KA +L 
Sbjct: 441 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 500

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           +++++  +  + + +  +IN  C +G V +A  ++   V  G+ P  V  + ++ GYC  
Sbjct: 501 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLV 560

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA      MVS G++P+ + Y TL+NG+ +   +D+  +L  +M  +G+ P  I Y
Sbjct: 561 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 620

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           ++I+ G  + GR   +++    M E G+  D  TY  ++ G        EA     E+
Sbjct: 621 SIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 678



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 240/460 (52%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P + TY  L++   R    E A      +   GL+  +   N L+ G C+  R D A ++
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 88  -LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV--APDIVSFSTLIGI 144
            L    ++G  PD  +Y+ LL   C +    +A+++   M+  G   +P++V+++T+I  
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G +++A   F+EM   G+ PD V Y  +++  C+   + +A     +M+ K  + +
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             TYN ++ G        EA  +F EM    + PD  T + L+   CK G + +A ++FD
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K   PD+ +YN +++G+   G +     L+  M+   I+P++ ++ +LI  Y + G
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A  ++ EM   G+KP +V+  T+I   CR G    A E  ++M+ +GV PD  +YN
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI GF    ++ KA  L+S++ N G+  D++ ++ I+   C+ GR+ D++ I    +  
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 541

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL+PD   Y+ L++G+     +++A R  D M+  G  P+
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 581



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 242/472 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LCK  KI  A+     M  KG  PD  +YN ++N Y  +G L +   L + M G G
Sbjct: 343 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 402

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T+N LI      G  D+A  + +EM   G+ PD  TY T++   CR   M +A 
Sbjct: 403 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 462

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E F +M  +GVAPD  +++ LI  F  +G L +A     E+ + G+  D V ++ IIN  
Sbjct: 463 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 522

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V++A  + D  +  G   D V Y+ +++G C    + +A  +F+ M+  G+ P+ 
Sbjct: 523 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 582

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TL++G+CK G +++ L+LF  M Q+ IKP  + Y+ +IDG  + G    A   + +
Sbjct: 583 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHE 642

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I+ +  +Y I++ G        EA  L+ E+    +K  +++ NT+I G  ++  
Sbjct: 643 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 702

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +  + +    + P+ ++Y+ +I   ++E  +++A  + S M+N G  P+    N 
Sbjct: 703 VEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 762

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           ++    ++  +  +   L ++ E+  + +  T   L++   S+   +E  RF
Sbjct: 763 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRF 814



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 224/467 (47%), Gaps = 19/467 (4%)

Query: 39  AYCREGFL--EEAFQLMNSMSGKGLKPGVFTYNSLINGLCK---KGRCDRAKEVLDEMLQ 93
           A  REG L  EEA  L++ +  +G        N  +  L +      C     +   +  
Sbjct: 49  ARVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFN 108

Query: 94  MG---------LSPDTATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTLIG 143
                      LSP + TY  +L++ C + +  E A   F ++ R G+  +I+  + L+ 
Sbjct: 109 RAASRAQGPRVLSPTSHTY-AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLE 167

Query: 144 IFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG-- 200
            F    + D AL +        G VPD   Y+I++   C  G   +A  +   M E G  
Sbjct: 168 GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV 227

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  +VV YNT+++G  +   + +A DLF EM++RG+ PD  T+ +++H  CK   M+KA 
Sbjct: 228 CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 287

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
                M  K + P+  TYN LI G+   G+ ++A +++ +M    I P+ ++  +L+   
Sbjct: 288 AFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 347

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + EA  ++  M  KG  P + S N ++ GY   G      +    M+ +G+ PD 
Sbjct: 348 CKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDF 407

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            ++N LI  +     +DKA  + ++M + G+ PDV+TY  ++   CR G+M D+     +
Sbjct: 408 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 467

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           MI++G+ PD+  Y  LI G  +  +L +A     E++  G   D  F
Sbjct: 468 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 514


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 154/399 (38%), Positives = 237/399 (59%), Gaps = 11/399 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK+ K+  AK FL  ME  G+ P  VTYNTL+  Y   G +E A  +++ M  KG
Sbjct: 232 MINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG 291

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TYN +++ +C +GR   A EVL EM  +GL PD+ +YN +L+  C   N  + E
Sbjct: 292 FQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYN-ILIRGC--SNNGDLE 345

Query: 121 EIFC---EMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             F    EM ++G+ P   +++TLI G+F  N +++ A +  RE++  G+V D+V Y I+
Sbjct: 346 TAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN-KIEAAEILIREIREKGIVLDSVTYNIV 404

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           INGYC++G   +A  + DEM+  G      TY +++  LCR     EAD+LF +++ +G+
Sbjct: 405 INGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGM 464

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD     TL+ GHC  GNM++A +L   M + +I PD VTYN L+ G C  G+ E+A +
Sbjct: 465 KPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARE 524

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L  +M  R I P++ISY  LI+GY   G    AF +  EM+  G  PTL++ N ++KG  
Sbjct: 525 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLS 584

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           ++ D   A+E L +M SEG+ P+  S+ ++I    + +N
Sbjct: 585 KNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623



 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 151/465 (32%), Positives = 247/465 (53%), Gaps = 3/465 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV   C+   +D A      M++KG  P T T N +++   R   +E A+     M    
Sbjct: 162 MVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRME 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+T+N +IN LCK+G+  +AK  L  M   G+ P   TYNTL+     +  +  A 
Sbjct: 222 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGAR 281

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM  +G  PD+ +++ ++      G   RA    REMK  GLVPD+V Y I+I G 
Sbjct: 282 MIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSVSYNILIRGC 338

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             NG +  A   RDEM+++G V    TYNT+++GL     +  A+ L  E+ E+G+  D 
Sbjct: 339 SNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 398

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I+G+C+ G+  KA  L D M    IKP   TY +LI   C+  +  +A++L+  
Sbjct: 399 VTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEK 458

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + + P+ +    L++G+C+ G++  AF L  EM    I P  V+ N +++G C  G 
Sbjct: 459 VVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGK 518

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E + +M   G+ PD ISYNTLI+G+ ++ +   AF +  +M + G  P ++TYN 
Sbjct: 519 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNA 578

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +L G  +      +E +L  M  +G+ P+ S++ ++I      +N
Sbjct: 579 LLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/457 (31%), Positives = 242/457 (52%), Gaps = 3/457 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           T+ ++ ++  YC+   ++EA +    M  KG  P   T N +++ L +  R + A     
Sbjct: 156 TILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYA 215

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +M +M +  +  T+N ++   C++  + +A+     M   G+ P IV+++TL+  +S  G
Sbjct: 216 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRG 275

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           +++ A M   EMKS G  PD   Y  I++  C  G   E L+   EM   G V D V+YN
Sbjct: 276 RIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLR---EMKGIGLVPDSVSYN 332

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            ++ G      L  A    +EM+++G+ P FYT+ TLIHG   +  +  A  L   + +K
Sbjct: 333 ILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 392

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            I  D VTYN +I+G+C+ G+ +KA  L  +M++  I P   +Y  LI   C      EA
Sbjct: 393 GIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREA 452

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L+ ++VGKG+KP LV  NT++ G+C +G+  +A   L +M    +DPD ++YN L+ G
Sbjct: 453 DELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRG 512

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
              E   ++A  L+ +M+ +G+ PD I+YN +++G+ ++G    + ++   M+  G NP 
Sbjct: 513 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPT 572

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             TY  L+ G     + + A     EM   G VP+D+
Sbjct: 573 LLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDS 609


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  285 bits (728), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 148/418 (35%), Positives = 247/418 (59%), Gaps = 6/418 (1%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           AF L   M    L     T+N ++  LC  G+  RA E+L +M +    P+  TYNT++ 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 109 ESCRKENMSEAEEIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
             C +  +  A +I  EM  RG +AP+  ++ T+I  + + G++D A+  F EM + G V
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 168 -PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            P+ V+Y  +I GYC  G +  AL  RD M+E+G  M V TYN +++ L      TEA +
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L  EM  +G+ PD +T+  LI+GHCK+GN+ KAL +F+ M+++ ++  +VTY  LI    
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G++++ +KL+ + + R I P+ + Y  LIN + + G++  AF +  EM  K I P  V
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + NT+++G C  G   +A + + +M   G+ PD ++YNTLI+G+  + ++  A  + ++M
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 453

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            N+G  P ++TYN ++ G C+ G+  D+E ++  M+E G+ PD STY +LI G  +++
Sbjct: 454 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 511



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 142/396 (35%), Positives = 218/396 (55%), Gaps = 6/396 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           M+  LC   K   A   L +M +    P+ VTYNT+I  +C  G ++ A  +M  M  + 
Sbjct: 120 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 175

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSE 118
           G+ P  +TY ++I+G CK GR D A +V DEML  G + P+   YN L+   C +  +  
Sbjct: 176 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 235

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A      M  RGVA  + +++ L+     +G+   A     EM   GL PD   Y I+IN
Sbjct: 236 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 295

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+ G V +AL++ + M  +G    VVTY  ++  L +   + E D LF+E + RG+ P
Sbjct: 296 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 355

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +  LI+ H   GN+++A  +   M +K I PD VTYNTL+ G C +G +++A KL 
Sbjct: 356 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 415

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R I P+ ++Y  LI+GY   G V +A R+  EM+ KG  PTL++ N +I+G C++
Sbjct: 416 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 475

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           G    A+  + +MV  G+ PD  +Y +LI G   E+
Sbjct: 476 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 511



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 215/399 (53%), Gaps = 6/399 (1%)

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +M ++ L   T T+N +L   C     + A E+  +M R    P+ V+++T+I  F   G
Sbjct: 104 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG 159

Query: 150 QLDRALMYFREMKS-AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVT 207
           ++  AL   REM+   G+ P+   Y  +I+G+C+ G V EA+K+ DEML KG V  + V 
Sbjct: 160 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 219

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ G C    L  A    + M+ERGV     T+  L+H    DG   +A  L + M 
Sbjct: 220 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 279

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K + PD+ TYN LI+G CK G ++KA +++ +M  R +    ++Y  LI      G V 
Sbjct: 280 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 339

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           E  +L+ E V +GI+P LV  N +I  +  SG+  +A E + +M  + + PD ++YNTL+
Sbjct: 340 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 399

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G      +D+A  L+ +M  +G+ PD++TYN +++G+  +G + D+  I   M+ KG N
Sbjct: 400 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 459

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P   TY  LI G        +A     EM++ G  PDD+
Sbjct: 460 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 498


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  285 bits (728), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 151/474 (31%), Positives = 256/474 (54%), Gaps = 7/474 (1%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D+ K+F  EM  +GV P+ +TYNT+I+ + + G LE  F+L + M   G KP V TYN L
Sbjct: 213 DALKVF-DEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVL 271

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++GLC+ GR D  + ++DEM    + PD  TY+ L     R  +      +F E  ++GV
Sbjct: 272 LSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGV 331

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
                + S L+    ++G++ +A      +   GLVP   +Y  +INGYC+   +  A  
Sbjct: 332 IIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFS 391

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + ++M  +    D +TYN ++NGLC+ +M+TEA+DL  EM + GV P   TF TLI  + 
Sbjct: 392 IFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYG 451

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           + G + K   +   M  K IK +++++ +++  FCK G++ +A  +  DMI + + PN  
Sbjct: 452 RAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQ 511

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y  +I+ Y   G   +AF L  +M   G+  ++ + N ++KG C++    +A+E +  +
Sbjct: 512 VYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNL 571

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            ++G+ PD +SYNT+I+    + + D+A  L+ +M    + P + TY+ +L+     GR+
Sbjct: 572 TNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRV 631

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           HD E +   M+ K + P  S Y T         +LK+      EM ++G   DD
Sbjct: 632 HDMECLYQHMVHKNVEPSSSIYGTRCENESKVASLKK------EMSEKGIAFDD 679



 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 251/461 (54%), Gaps = 2/461 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSM--SGKGLKPGVFTYNSLINGLCKKGRCD 82
           G  PDT  +N  + A    G L+EA  ++  M  S     P  F+YN +I GL + G+  
Sbjct: 153 GARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 212

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A +V DEM+  G++P+  TYNT++    +  ++     +  +M + G  P++V+++ L+
Sbjct: 213 DALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLL 272

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               R G++D       EM S  ++PD   Y+I+ +G  R G     L +  E L+KG +
Sbjct: 273 SGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI 332

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           +   T + +LNGLC+   + +A+ +   ++  G+ P    + TLI+G+C+  ++  A ++
Sbjct: 333 IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSI 392

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M  + I+PD +TYN LI+G CK+  + +A  L  +M    + P+  ++  LI+ Y  
Sbjct: 393 FEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGR 452

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G + + F +  +M  KGIK  ++S  +++K +C++G   +A   L  M+ + V P++  
Sbjct: 453 AGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQV 512

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN++I+ ++     ++AF LV KM++ G+   + TYN++L G C+  ++ ++E +++ + 
Sbjct: 513 YNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLT 572

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +GL PD  +Y T+I+   ++ +   A     EM +    P
Sbjct: 573 NQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRP 613



 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 142/447 (31%), Positives = 229/447 (51%), Gaps = 6/447 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD  +YN +I    R G   +A ++ + M  +G+ P   TYN++I+G  K G  +    +
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            D+MLQ G  P+  TYN LL   CR   M E   +  EM+   + PD  ++S L    +R
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G     L  F E    G++      +I++NG C++G V +A ++ + ++  G V     
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++NG C+ + L  A  +F +M  R + PD  T+  LI+G CK   + +A +L   M 
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  + P + T+NTLID + + G++EK   + +DM  + I  N IS+G ++  +C  G + 
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +M+ K + P     N+II  Y  SG   +A   + KM S GV     +YN L+
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  +   +D+A  L+  + NQGL PDV++YN I++  C +G    +  +L  M +  + 
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIR 612

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHD 474
           P   TY  L++       L  A R HD
Sbjct: 613 PTLRTYHPLLSA------LGSAGRVHD 633



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 186/360 (51%), Gaps = 2/360 (0%)

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
           C  S R   P + S + L+      G+       F  + +AG  PD   +   +      
Sbjct: 112 CAGSVRSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAA 171

Query: 184 GFVLEALKMRDEM--LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           G + EAL M   M   E     D  +YN ++ GL R+   ++A  +F+EM++RGV P+  
Sbjct: 172 GDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQI 231

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+ T+I GH K G++     L D M Q   KP++VTYN L+ G C+ G M++   L  +M
Sbjct: 232 TYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEM 291

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            S  + P+  +Y IL +G    G       L+ E + KG+     +C+ ++ G C+ G  
Sbjct: 292 TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKV 351

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           +KA++ L  +V  G+ P +  YNTLING+ +  ++  AF++  +M+++ + PD ITYN +
Sbjct: 352 AKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNAL 411

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + G C+   + ++E ++  M + G++P   T+ TLI+ +     L++ F    +M  +G 
Sbjct: 412 INGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 207/414 (50%), Gaps = 6/414 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  ++D  +  + EM    + PD  TY+ L +   R G       L      KG
Sbjct: 271 LLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKG 330

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +  G +T + L+NGLCK G+  +A++VL+ ++  GL P TA YNTL+   C+  ++  A 
Sbjct: 331 VIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAF 390

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF +M  R + PD ++++ LI    +   +  A     EM+ +G+ P    +  +I+ Y
Sbjct: 391 SIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAY 450

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G + +   +  +M +KG   +V+++ +++   C+   + EA  + ++M+ + V P+ 
Sbjct: 451 GRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNA 510

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + ++I  + + G   +A  L + M    +   I TYN L+ G CK  ++++A +L  +
Sbjct: 511 QVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYN 570

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + ++ + P+ +SY  +I+  C+ G    A  L  EM    I+PTL + + ++     +G 
Sbjct: 571 LTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGR 630

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
               +     MV + V+P S  Y T      R EN  K  +L  +M  +G+  D
Sbjct: 631 VHDMECLYQHMVHKNVEPSSSIYGT------RCENESKVASLKKEMSEKGIAFD 678



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 2/144 (1%)

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P+L SCN +++     G  +        +V+ G  PD+ ++N  +   V   ++D+A A+
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 403 VSKM-ENQGL-VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
           + +M  ++G   PD  +YNV++ G  R G+  D+  +   M+++G+ P++ TY T+I+GH
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPD 484
           V   +L+  FR  D+MLQ G  P+
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPN 264



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 37/216 (17%)

Query: 304 RKISPNYISYGILINGYCSMGH---VTEAFRL------------WYEMVGKGI------- 341
           R   P+  S  +L+    S+G    V  AF L            W + V   +       
Sbjct: 117 RSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDE 176

Query: 342 ---------------KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
                           P   S N +I G  RSG  S A +   +MV  GV P+ I+YNT+
Sbjct: 177 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G V+  +++  F L  +M   G  P+V+TYNV+L+G CR GRM ++  ++  M    +
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSM 296

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            PD  TY+ L +G     + +       E L++G +
Sbjct: 297 LPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI 332


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  285 bits (728), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 259/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +D A+ FL +M  K V P+  TYN LI  Y   G  +EA ++   M    
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T + L+  LCK G+   A++V D M   G +PD  +YN +L     K  + +  
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   G+APD  +F+ LI  ++  G LD+A++ F EM+  G+ PD V Y  +I   
Sbjct: 380 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G + +A++  ++M+++G   D   YN ++ G C    L +A +L +E++  G+  D 
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F+++I+  CK G +  A N+FD+     + PD V Y+ L+DG+C VG+MEKA +++  
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 559

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I PN + Y  L+NGYC +G + E   L+ EM+ +GIKP+ +  + II G  ++G 
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M   G+  D  +YN ++ G  +    D+A  L  ++    +  ++IT N 
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  +  R+ +++ +   +    L P   TY+ +I   + +  ++EA      M   G
Sbjct: 680 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 481 FVPD 484
             P+
Sbjct: 740 CEPN 743



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 244/478 (51%), Gaps = 2/478 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY--PDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++ +LC   K   A   L  M + G    P+ V YNT+I+ + +EG + +A  L   M  
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G+ P + TYNS+++ LCK    D+A+  L +M+   + P+  TYN L+          E
Sbjct: 248 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F EM R  + PD+V+ S L+G   + G++  A   F  M   G  PD   Y I++N
Sbjct: 308 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G +++   + D ML  G   D  T+N ++       ML +A  +FNEM + GV P
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+ T+I   C+ G M+ A+  F+ M  + + PD   YN LI GFC  G + KA +L 
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 487

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           +++++  +  + + +  +IN  C +G V +A  ++   V  G+ P  V  + ++ GYC  
Sbjct: 488 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLV 547

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA      MVS G++P+ + Y TL+NG+ +   +D+  +L  +M  +G+ P  I Y
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 607

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           ++I+ G  + GR   +++    M E G+  D  TY  ++ G        EA     E+
Sbjct: 608 SIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 665



 Score =  257 bits (657), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 260/480 (54%), Gaps = 3/480 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ-LMNSMSGKGLKPGV 65
           + H+ + A  F  ++ + G+  + +  N L+  +C     +EA   L++     G  P V
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 182

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGL--SPDTATYNTLLVESCRKENMSEAEEIF 123
           F+Y+ L+  LC +G+  +A ++L  M + G   SP+   YNT++    ++ ++++A ++F
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 242

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +RG+ PD+V++++++    +   +D+A  + R+M +  ++P+N  Y  +I GY   
Sbjct: 243 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 302

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G   EA+++  EM     + DVVT + ++  LC+   + EA D+F+ M  +G  PD +++
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             +++G+   G +    +LFD+M    I PD  T+N LI  +   G ++KA  ++ +M  
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 422

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             + P+ ++Y  +I   C +G + +A   + +M+ +G+ P   + N +I+G+C  G   K
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 482

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E +S++++ G+  D + ++++IN   +   +  A  +     N GL PD + Y++++ 
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 542

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+C  G+M  +  +   M+  G+ P+   Y TL+NG+     + E      EMLQRG  P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 602



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 240/460 (52%), Gaps = 3/460 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P + TY  L++   R    E A      +   GL+  +   N L+ G C+  R D A ++
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 88  L-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV--APDIVSFSTLIGI 144
           L     ++G  PD  +Y+ LL   C +    +A+++   M+  G   +P++V+++T+I  
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G +++A   F+EM   G+ PD V Y  +++  C+   + +A     +M+ K  + +
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             TYN ++ G        EA  +F EM    + PD  T + L+   CK G + +A ++FD
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K   PD+ +YN +++G+   G +     L+  M+   I+P++ ++ +LI  Y + G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A  ++ EM   G+KP +V+  T+I   CR G    A E  ++M+ +GV PD  +YN
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI GF    ++ KA  L+S++ N G+  D++ ++ I+   C+ GR+ D++ I    +  
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL+PD   Y+ L++G+     +++A R  D M+  G  P+
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 241/472 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LCK  KI  A+     M  KG  PD  +YN ++N Y  +G L +   L + M G G
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 389

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T+N LI      G  D+A  + +EM   G+ PD  TY T++   CR   M +A 
Sbjct: 390 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E F +M  +GVAPD  +++ LI  F  +G L +A     E+ + G+  D V ++ IIN  
Sbjct: 450 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V++A  + D  +  G   D V Y+ +++G C    + +A  +F+ M+  G+ P+ 
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 569

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TL++G+CK G +++ L+LF  M Q+ IKP  + Y+ +IDG  + G    A   + +
Sbjct: 570 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHE 629

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I+ +  +Y I++ G        EA  L+ E+    +K  +++ NT+I G  ++  
Sbjct: 630 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 689

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +  + +    + P  ++Y+ +I   ++E  +++A  + S M+N G  P+    N 
Sbjct: 690 VEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 749

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           ++    ++  +  +   L ++ E+  + +  T   L++   S+   +E  RF
Sbjct: 750 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRF 801



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 224/467 (47%), Gaps = 19/467 (4%)

Query: 39  AYCREGFL--EEAFQLMNSMSGKGLKPGVFTYNSLINGLCK---KGRCDRAKEVLDEMLQ 93
           A  REG L  EEA  L++ +  +G        N  +  L +      C     +   +  
Sbjct: 36  ARVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFN 95

Query: 94  MG---------LSPDTATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTLIG 143
                      LSP + TY  +L++ C + +  E A   F ++ R G+  +I+  + L+ 
Sbjct: 96  RAASRAQGPRVLSPTSHTY-AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLE 154

Query: 144 IFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG-- 200
            F    + D AL +        G VPD   Y+I++   C  G   +A  +   M E G  
Sbjct: 155 GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV 214

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  +VV YNT+++G  +   + +A DLF EM++RG+ PD  T+ +++H  CK   M+KA 
Sbjct: 215 CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 274

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
                M  K + P+  TYN LI G+   G+ ++A +++ +M    I P+ ++  +L+   
Sbjct: 275 AFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 334

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + EA  ++  M  KG  P + S N ++ GY   G      +    M+ +G+ PD 
Sbjct: 335 CKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDF 394

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            ++N LI  +     +DKA  + ++M + G+ PDV+TY  ++   CR G+M D+     +
Sbjct: 395 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 454

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           MI++G+ PD+  Y  LI G  +  +L +A     E++  G   D  F
Sbjct: 455 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 249/494 (50%), Gaps = 32/494 (6%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M Q+G  P  VTY  L+ A C+     EA  +++ M  KG  P + TYN +ING+C++GR
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D AKE+L+ +   G  PD  +Y T+L   C      + + +F EM  +   P+ V+F  
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  F R G ++RA+   ++M   G  P+  L  I+IN  C+ G V +A    + M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  D ++Y T+L GLCRA     A +L  EM+ +   P+  TF T I   C+ G + +A+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVG------------------------------- 289
            L ++M +      IVTYN L+ GFC  G                               
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHA 477

Query: 290 -EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
             ++ A +L A+MI +    N +++ +L++ +C  G V EA  L  +M+  G  P L++ 
Sbjct: 478 ERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITF 537

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           NT++ G  +  ++ +A E L  +VS+GV  D+I+Y+++++   RE+  ++A  ++  +++
Sbjct: 538 NTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQD 597

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            G+ P V  YN IL   C++     +      M+  G  P+ STY  LI G   +  LKE
Sbjct: 598 MGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKE 657

Query: 469 AFRFHDEMLQRGFV 482
           A     E+  +G +
Sbjct: 658 ARYVLSELYAKGVL 671



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 218/412 (52%), Gaps = 3/412 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   + D  K+   EM  K   P+ VT++ L+  +CR G +E A Q++  MS  G
Sbjct: 263 VLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG 322

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P     N +IN +CK+GR D A + L+ M   G +PDT +Y T+L   CR      A+
Sbjct: 323 CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAK 382

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R+   P+ V+F+T I I  + G +++A+     M   G     V Y  +++G+
Sbjct: 383 ELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGF 442

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V  AL++ + +    C  + +TY T+L GLC A+ L  A +L  EM+++    + 
Sbjct: 443 CVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNA 499

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  L+   C+ G + +A+ L + M +    P+++T+NTL+DG  K    E+A +L   
Sbjct: 500 VTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHG 559

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++S+ +S + I+Y  +++         EA ++ + +   G++P +   N I+   C+  +
Sbjct: 560 LVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCE 619

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
             +A +F + MVS G  P+  +Y  LI G   E  + +A  ++S++  +G++
Sbjct: 620 TDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 671



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 67/133 (50%)

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G   + + S      S M+  G  P  ++Y  L+    +     +A  ++ +M  +G  
Sbjct: 160 SGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT 219

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+++TYNVI+ G CR+GR+ D++ IL R+   G  PD  +YTT++ G  +     +    
Sbjct: 220 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 279

Query: 473 HDEMLQRGFVPDD 485
             EM+ +  VP++
Sbjct: 280 FAEMVDKKCVPNE 292



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 89/172 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C+   ++ A   + +M + G  P+ +T+NTL++   ++   EEA +L++ +  KG
Sbjct: 505 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 564

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY+S+++ L ++ R + A ++L  +  MG+ P    YN +L   C++    +A 
Sbjct: 565 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 624

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           + F  M   G  P+  ++  LI   +  G L  A     E+ + G++  ++L
Sbjct: 625 DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSLL 676


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 264/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D       +M++  +     TYN LIN +CR   +  A  L+  M   G
Sbjct: 91  LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 150

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M++MG  PDT T+ TL+         SEA 
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M +RG  P++V++  ++    + G  D AL    +M++A +  D V++  II+  
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +AL +  EM  KG   +VVTY+++++ LC     ++A  L ++M+E+ + P+ 
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI    K+G   +A  L+D M ++SI PDI TYN+L++GFC    ++KA +++  
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+   P+ ++Y  LI G+C    V +   L+ EM  +G+    V+  T+I+G    GD
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   +MVS+GV PD ++Y+ L++G      ++KA  +   M+   +  D+  Y  
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ D   +   +  KG+ P+  TY T+I+G  S+  L+EA+    +M + G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570

Query: 481 FVPD 484
            +P+
Sbjct: 571 PLPN 574



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 256/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  +I  A   L +M + G  P  VT ++L+N YC    + +A  L++ M   G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+ +LI+GL    +   A  ++D M+Q G  P+  TY  ++   C++ +   A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M    +  D+V F+T+I    +   +D AL  F+EM++ G+ P+ V Y+ +I+  
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A ++  +M+EK    ++VT+N +++   +     EA+ L+++M++R + PD 
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +L++G C    ++KA  +F+ M  K   PD+VTYNTLI GFCK   +E   +L+ +
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  + ++Y  LI G    G    A +++ +MV  G+ P +++ + ++ G C +G 
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E    M    +  D   Y T+I G  +   +D  + L   +  +G+ P+V+TYN 
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G C +  + ++  +L +M E G  P+  TY TLI  H+   +   +     EM    
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605

Query: 481 FVPD 484
           FV D
Sbjct: 606 FVGD 609



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 219/427 (51%)

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G+    G   Y  ++       + D A  +   M++    P    +N LL    + +   
Sbjct: 43  GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
               +  +M R  +   + +++ LI  F R  Q+  AL    +M   G  P  V  + ++
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NGYC    + +A+ + D+M+E G   D +T+ T+++GL      +EA  L + M++RG  
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  +++G CK G+ + ALNL + M    I+ D+V +NT+ID  CK   ++ A  L
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           + +M ++ I PN ++Y  LI+  CS G  ++A +L  +M+ K I P LV+ N +I  + +
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A++    M+   +DPD  +YN+L+NGF   + +DKA  +   M ++   PDV+T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN ++ GFC+  R+ D   +   M  +GL  D  TYTTLI G     +   A +   +M+
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462

Query: 478 QRGFVPD 484
             G  PD
Sbjct: 463 SDGVPPD 469



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 4/233 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +++       EM  +G+  DTVTY TLI     +G  + A ++   M   G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY+ L++GLC  G+ ++A EV D M +  +  D   Y T++   C+   + +  
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++FC +S +GV P++V+++T+I        L  A    ++MK  G +P++  Y  +I  +
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            R+G    + ++  EM     V D  T   + N L   ++    D  F +ML 
Sbjct: 586 LRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL----DKSFLDMLS 634


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 257/483 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCKD  +  A+  + ++ +  + PDT TY ++I  +CR+  L+ A Q+ N M+ +G
Sbjct: 391 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 450

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TY++LINGLC  GR + A +++ EM+  G+ P   T    ++  C      +A 
Sbjct: 451 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 510

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M  +G  P++ +++ LI     +G L  A+  F  M   G+ P+ V Y  +IN  
Sbjct: 511 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 570

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             N  +  A  + + M   G   ++VTYN ++ G C      +A  + N ML+RG   + 
Sbjct: 571 VENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 630

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I G+C  GN   AL + D+M     KPD  +Y  LI GFCK+ +ME A  L+ +
Sbjct: 631 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 690

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN ++Y  LI+GYC    +  A  L   M   G +P + + N +I G  +  +
Sbjct: 691 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 750

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A+E    M+ EG+ P+ ++Y  +I+G  +  +   A  + +KM  QG +P+++TY+ 
Sbjct: 751 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 810

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++G++ ++E +   +   GL PD  TY  +I  ++    ++ AF F   M++ G
Sbjct: 811 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 870

Query: 481 FVP 483
             P
Sbjct: 871 CQP 873



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 256/468 (54%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL  + Q G+      Y+ L+    R G         + M  +G++P +  YN++IN LC
Sbjct: 337 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 396

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K G    A+ ++ ++ +  +SPDT TY ++++  CRK ++  A ++F +M++ G  P+ V
Sbjct: 397 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 456

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++STLI     +G+++ A    REM   G++P     T  I   C  G   +A ++  +M
Sbjct: 457 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 516

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             KGC  +V TY  +++GLC + +L  A  LF+ M   GVFP+  T+  LI+   ++  +
Sbjct: 517 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 576

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
             A  + ++M +  +  +IVTYN +I G+C +G+ +KA  +  +M+ R  S N ++Y  +
Sbjct: 577 KYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 636

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I GYC  G+ T A R+   M   G KP   S   +I G+C+      A    ++MV +G+
Sbjct: 637 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 696

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+ ++Y  LI+G+ ++E +D A +L+  M+  G  P+V TYNV++ G  +Q     +E 
Sbjct: 697 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 756

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   MIE+G+ P+  TYT +I+G     +   A    ++M+++G +P+
Sbjct: 757 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/489 (33%), Positives = 251/489 (51%), Gaps = 8/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C+ H +DSA     +M ++G  P+TVTY+TLIN  C  G + EAF L+  M   G
Sbjct: 426 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 485

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T    I  LC  G  + A  +  +M   G  P+  TY  L+   C    +  A 
Sbjct: 486 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 545

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  MSR GV P+ V+++ LI I   N ++  A +    M   GL  + V Y  +I GY
Sbjct: 546 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGY 605

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +A+ + + ML++G   ++VTYNTI+ G C +   T A  + + M + G  PD 
Sbjct: 606 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 665

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++T LI G CK   M  A  LF+ M    + P+ VTY  LIDG+CK  +++ A  L   
Sbjct: 666 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 725

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y +LI+G     + + A  L   M+ +GI P +V+   +I G C++G 
Sbjct: 726 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 785

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A E  +KM+ +G  P+ ++Y++LI    +E  +++A  L +++E  GL+PD ITY  
Sbjct: 786 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 845

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR- 479
           ++  +   G++  +   L RMI+ G  P   TY  LI G      LK  +   D+ L   
Sbjct: 846 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG------LKNEYLLADQRLAAL 899

Query: 480 -GFVPDDAF 487
              VP+ +F
Sbjct: 900 PDVVPNCSF 908



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 239/465 (51%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  +GV P+ + YN +INA C++G + +A  +M  +    + P  FTY S+I G C+K  
Sbjct: 376 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 435

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A +V ++M + G  P+T TY+TL+   C    ++EA ++  EM   G+ P   + + 
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I      G  + A   F +MK+ G  P+   YT +I+G C +G +  A+ +   M   G
Sbjct: 496 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              + VTYN ++N L   + +  A  + N M   G+F +  T+  +I G+C  G+  KA+
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            + + M Q+    ++VTYNT+I G+C  G    A ++   M      P+  SY  LI G+
Sbjct: 616 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 675

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +  +  AF L+ EMV  G+ P  V+   +I GYC+      A   L  M   G  P+ 
Sbjct: 676 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 735

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YN LI+G  ++ N   A  L   M  +G+ P+V+TY  ++ G C+ G    +  +  +
Sbjct: 736 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 795

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           MIE+G  P+  TY++LI     +  ++EA     E+ + G +PD+
Sbjct: 796 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 840



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 257/543 (47%), Gaps = 59/543 (10%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ LC    +  A      M + GV+P+TVTYN LIN       ++ AF ++N M   G
Sbjct: 531  LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 590

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            L   + TYN +I G C  G   +A  V++ MLQ G S +  TYNT++   C   N + A 
Sbjct: 591  LFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 650

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             I   M   G  PD  S++ LI  F +  +++ A   F EM   GL P+ V YT +I+GY
Sbjct: 651  RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 710

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C++  +  A  + + M   GC  +V TYN +++GL +    + A++L   M+E G+FP+ 
Sbjct: 711  CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 770

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T+T +I G CK+G+ + AL +F+ M ++   P+++TY++LI    + G++E+A  L+A+
Sbjct: 771  VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 830

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFR-------------LW-YEMVGKGIK---- 342
            +    + P+ I+Y  +I  Y   G V  AF              LW Y ++ KG+K    
Sbjct: 831  LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 890

Query: 343  ---------PTLV-SC-------------------------------NTIIKGYCRSGDA 361
                     P +V +C                               N ++     +G  
Sbjct: 891  LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 950

Query: 362  SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             +A+E L  M+S+G+ PD  +YN+L+   +R  N+D A  +   M  QG    +  Y  +
Sbjct: 951  FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 1010

Query: 422  LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            +   C+  R  ++ +    M+ +  NPD      LI+G +          F   M  R +
Sbjct: 1011 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 1070

Query: 482  VPD 484
            +P 
Sbjct: 1071 MPS 1073



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/439 (31%), Positives = 222/439 (50%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +      ++ +S  GL+ G+F Y++L+  L + G      +    ML  G+ P+   YN 
Sbjct: 331 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 390

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   C+  N+++AE I  ++    ++PD  +++++I    R   LD AL  F +M   G
Sbjct: 391 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 450

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+ V Y+ +ING C +G V EA  +  EM+  G +    T    +  LC      +A 
Sbjct: 451 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 510

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            LF +M  +G  P+ YT+T LI G C  G +  A+ LF  M++  + P+ VTYN LI+  
Sbjct: 511 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 570

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
            +   ++ A  +   M    +  N ++Y  +I GYC +G   +A  +   M+ +G    L
Sbjct: 571 VENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 630

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ NTIIKGYC SG+ + A   L  M   G  PD  SY  LI GF +   M+ AF L ++
Sbjct: 631 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 690

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M + GL P+ +TY  ++ G+C+  ++  +  +L  M   G  P+  TY  LI+G   QNN
Sbjct: 691 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 750

Query: 466 LKEAFRFHDEMLQRGFVPD 484
              A      M++ G  P+
Sbjct: 751 FSGAEELCKVMIEEGIFPN 769



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 176/335 (52%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           + R + +   +  +GL      Y+ ++    R G     +     ML +G   +++ YN 
Sbjct: 331 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 390

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++N LC+   + +A+ +  ++ E  + PD +T+T++I GHC+  +++ AL +F+ M ++ 
Sbjct: 391 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 450

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            +P+ VTY+TLI+G C  G + +A  L  +MI   I P   +    I   C MG   +A+
Sbjct: 451 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 510

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           RL+ +M  KG +P + +   +I G C SG    A     +M  +GV P++++YN LIN  
Sbjct: 511 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 570

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
           V    +  AF +++ M   GL  +++TYN ++ G+C  G    + L++  M+++G + + 
Sbjct: 571 VENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 630

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            TY T+I G+    N   A R  D M   G  PD+
Sbjct: 631 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 665



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 189/380 (49%), Gaps = 1/380 (0%)

Query: 107 LVESCR-KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L++SC  KE M+        +S+ G+   + ++S L+   SR G     +  +  M S G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           + P+ ++Y  +IN  C++G V +A  +  ++ E     D  TY +++ G CR   L  A 
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            +FN+M + G  P+  T++TLI+G C  G +N+A +L   M    I P   T    I   
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C +G  E A +L+ DM ++   PN  +Y  LI+G C  G +  A  L++ M   G+ P  
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ N +I     +     A   L+ M   G+  + ++YN +I G+    +  KA  +++ 
Sbjct: 561 VTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNN 620

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  +G   +++TYN I+ G+C  G    +  IL  M + G  PD  +YT LI G    + 
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
           ++ AF   +EM+  G  P++
Sbjct: 681 MESAFGLFNEMVDDGLCPNE 700



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 206/480 (42%), Gaps = 59/480 (12%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            M+   C       A + +  M Q+G   + VTYNT+I  YC  G    A ++++ M   G
Sbjct: 601  MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 660

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             KP  ++Y  LI G CK  + + A  + +EM+  GL P+  TY  L+   C+ E +  A 
Sbjct: 661  CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 720

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +   M R G  P++ +++ LI   ++      A    + M   G+ P+ V YT +I+G 
Sbjct: 721  SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 780

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C+NG    AL+M ++M+E+GC+ +++TY++++  L +   + EA++LF E+   G+ PD 
Sbjct: 781  CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 840

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQ--------------KSIK-------------P 273
             T+  +I  +   G +  A N    M +              K +K             P
Sbjct: 841  ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 900

Query: 274  DIV--------------------------------TYNTLIDGFCKVGEMEKANKLWADM 301
            D+V                                  N L+      G   +AN+L   M
Sbjct: 901  DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 960

Query: 302  ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            IS+ + P+  +Y  L+     + +V  A  ++  M  +G +  L     +I   C+    
Sbjct: 961  ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 1020

Query: 362  SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             +A      M+    +PD +    LI+G +R+   D     +  ME +  +P    Y ++
Sbjct: 1021 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 157/487 (32%), Positives = 257/487 (52%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  K + +  FL  M  KG  PD +    LI  +     + +A ++M  +   G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP VF YN+LI+G  K  + + A  VLD M   G  PD  TYN ++   C +  +  A 
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF E+ +    P +++++ LI     +G +D A+    EM S GL PD + Y  II G 
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +A ++   +  +GC  D++TYN +L  L      +E + L +EM+  G  P+ 
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T + LI   C+DG + +A+NL   M +K +KPD   Y+ LI GFC+ G ++ A +    
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS    P+ ++Y  ++ G C  G   +A  ++ ++   G  P + S NT+      SGD
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E + K++++G+DPD I+YN+LI+   R+  +D+A  L+  M++    P+V++YN+
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNI 493

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL G C+  R +D+  +L  M EKG  P+ +TY  LI G        EA    + +    
Sbjct: 494 ILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMN 553

Query: 481 FVPDDAF 487
            + +D+F
Sbjct: 554 AISEDSF 560


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 156/482 (32%), Positives = 252/482 (52%), Gaps = 12/482 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  + D ++ F  +M   G+     TYN +I+  C+EG LE A  L   M   G
Sbjct: 27  LLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG 86

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYNSLI+G  K G  D    + ++M      PD  TYN L+   C+ E M +A 
Sbjct: 87  FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 146

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   EM   G+ P++V++ST I  F + G L  A+ +F +M+   L P+   YT +I+  
Sbjct: 147 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 206

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EALK+ +E+L+ G  ++VVTY  +L+GLC    + EA+++F  ML  GV P+ 
Sbjct: 207 CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQ 266

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T L+HG  K   M  A ++   M +K IKPD++ Y T++ G C    +E+A  L  +
Sbjct: 267 ETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGE 326

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    I+ N + Y  L++ Y   G  TEA  L  EM+             ++ G C++  
Sbjct: 327 IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML------------DLVDGLCKNNC 374

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   +M+ +G+ PD I+Y  LI+G ++  N+ +A  L  +M   G+  D+  Y  
Sbjct: 375 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 434

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G    G++  +  +L  MI KG+ PD   Y  LI  + +   + EA    +EM +RG
Sbjct: 435 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494

Query: 481 FV 482
            +
Sbjct: 495 MI 496



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 239/463 (51%), Gaps = 23/463 (4%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           LEEA +    M    + P   + N+L++ L K GR D +++   +M   G+     TYN 
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   C++ ++  A  +F +M   G  PDIV++++LI    + G LD  +  F +MK A 
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             PD + Y  +IN +C+   + +A +   EM   G   +VVTY+T ++  C+  ML EA 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
             F +M    + P+ +T+T+LI  +CK GN+ +AL L + + Q  IK ++VTY  L+DG 
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C+ G M++A +++  M++  ++PN  +Y  L++G+     +  A  +  EM  K IKP L
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS- 404
           +   TI+ G C      +A   + ++   G++ +++ Y TL++ + +     +A  L+  
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361

Query: 405 ----------------------KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
                                 +M ++G++PD I Y  ++ G  + G + ++  +  RMI
Sbjct: 362 MLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMI 421

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           E G+  D   YT LI G      +++A    DEM+ +G +PD+
Sbjct: 422 EIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDE 464



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 140/300 (46%), Gaps = 35/300 (11%)

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
           ML EA + F +M +  VFP   +   L+H   K G  + +   F  M    IK  + TYN
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING-------------------- 319
            +ID  CK G++E A  L+  M     +P+ ++Y  LI+G                    
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 320 ---------------YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
                          +C    + +AF   +EM   G+KP +V+ +T I  +C+ G   +A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            +F   M    + P+  +Y +LI+   +  N+ +A  LV ++   G+  +V+TY  +L G
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C +GRM ++E +   M+  G+ P++ TYT L++G +    ++ A     EM ++   PD
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    ++  A+  L EM  KGV PD V Y  LI  Y   G ++EA +L N M+ +G
Sbjct: 435 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494

Query: 61  LKPGV 65
           +  G+
Sbjct: 495 MITGL 499


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 151/466 (32%), Positives = 250/466 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM ++ V P+ +TYNT+I+ + + G LE  F L + M   GLKP   TYN L++GLC+ G
Sbjct: 221 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAG 280

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R      +LDEM    + PD  TY+ L     R  +      +F +  + GV     + S
Sbjct: 281 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCS 340

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            L+    ++G++  A    + + +AGLVP  V+Y  +INGYC+ G +  A     +M  +
Sbjct: 341 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 400

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               D +TYN ++NGLC+A+ +T A DL  EM + GV P   TF TLI  + + G + K 
Sbjct: 401 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 460

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +   M +  +KP++V+Y ++++ FCK G++ +A  +  DM  + + PN   Y  +I+ 
Sbjct: 461 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 520

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y   G   +AF L  +M   GI P++V+ N +IKG C     S+A+E ++ + +  + PD
Sbjct: 521 YVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 580

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           ++SYNTLI+      N+DKA  L  +M   G+   V TY+ +++G    GR+ + E +  
Sbjct: 581 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQ 640

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +M++  + P  + +  ++  +    N  +A     EMLQ+    DD
Sbjct: 641 KMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 686



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 232/460 (50%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  +YN +I    R G   +A ++ + M+ + + P   TYN++I+G  K G  +    +
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            D+M+  GL P+  TYN LL   CR   M E   +  EM+ + + PD  ++S L    SR
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 313

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           NG     L  F +    G+   +   +I++NG C++G V  A ++   ++  G V   V 
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 373

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++NG C+   L  A   F +M  R + PD  T+  LI+G CK   +  A +L   M 
Sbjct: 374 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
              + P + T+NTLID + + G++EK   + ++M    + PN +SYG ++N +C  G + 
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +M  K + P     N II  Y   G   +A   + KM S G+ P  ++YN LI
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G   +  + +A  +++ + N  L+PD ++YN +++  C +G +  +  +  RM + G+ 
Sbjct: 554 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 613

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
               TY  LI+G      L E    + +M+Q   VP +A 
Sbjct: 614 STVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAI 653



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 227/449 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++   K   +++      +M   G+ P+ +TYN L++  CR G + E   L++ M+ + 
Sbjct: 237 MIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 296

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTY+ L +GL + G       +  + L+ G++    T + LL   C+   +S AE
Sbjct: 297 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAE 356

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   +   G+ P  V ++TLI  + + G+L+ A   F +MKS  + PD++ Y  +ING 
Sbjct: 357 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 416

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A  +  EM + G    V T+NT+++   R   L +   + +EM E G+ P+ 
Sbjct: 417 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 476

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ ++++  CK+G + +A+ + D M  K + P+   YN +ID + + G  ++A  L   
Sbjct: 477 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 536

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  ISP+ ++Y +LI G C+   ++EA  +   +    + P  VS NT+I   C  G+
Sbjct: 537 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 596

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +   +M   G+     +Y+ LI+G      + +   L  KM    +VP    +N+
Sbjct: 597 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNI 656

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           ++  + + G    +E +   M++K  N D
Sbjct: 657 MVEAYSKYGNEIKAEDLRKEMLQKRNNHD 685



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 197/403 (48%), Gaps = 36/403 (8%)

Query: 117 SEAEEIFCEMSRRGVAPDI------------------------------------VSFST 140
           ++    F  ++  G  PD                                      S++ 
Sbjct: 142 ADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNV 201

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I    R G+   A+  F EM    ++P+++ Y  +I+G+ + G +     +RD+M+  G
Sbjct: 202 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHG 261

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              + +TYN +L+GLCRA  + E   L +EM  + + PD +T++ L  G  ++G+    L
Sbjct: 262 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 321

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +LF    +  +     T + L++G CK G++  A ++   +++  + P  + Y  LINGY
Sbjct: 322 SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 381

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G +  AF  + +M  + IKP  ++ N +I G C++   + A + L +M   GV+P  
Sbjct: 382 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 441

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            ++NTLI+ + R   ++K F ++S+M+  GL P+V++Y  I+  FC+ G++ ++  IL  
Sbjct: 442 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 501

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           M  K + P+   Y  +I+ +V      +AF   ++M   G  P
Sbjct: 502 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 544



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 3/159 (1%)

Query: 329 AFRLWYEMV--GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           A RL  ++    +   P+L SCN +++     G  +        + S G  PD+ ++N  
Sbjct: 107 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 166

Query: 387 INGFVREENMDKAFALVSKMENQGL-VPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +   V   ++ +A  ++ +M   G   P+  +YNV++ G  R GR  D+  +   M E+ 
Sbjct: 167 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 226

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + P+  TY T+I+GH+   +L+  F   D+M+  G  P+
Sbjct: 227 VLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPN 265



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 36/198 (18%)

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG-------- 375
           G   +  R +  +   G +P   + N  ++    +GD  +A   L +M  +G        
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 376 ----------------------------VDPDSISYNTLINGFVREENMDKAFALVSKME 407
                                       V P+ I+YNT+I+G ++  +++  F+L  +M 
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             GL P+ ITYNV+L+G CR GRM ++  +L  M  + + PD  TY+ L +G     + K
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318

Query: 468 EAFRFHDEMLQRGFVPDD 485
                  + L+ G    D
Sbjct: 319 AMLSLFGKSLKNGVTIGD 336


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 261/485 (53%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK H++  A + + EM   G+ PD  T+ T++  Y   G L+ A ++   M   G
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 T N LING CK+GR D+A   + E +  G  PD  TYNTL+   C+  +   A 
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M   G+ PDI ++++LI    + G+++ A+    +M S    P+ V Y  II+  
Sbjct: 329 EVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSL 388

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA ++   +  KG + DV T+N+++ GLC +     A DLF EM  +G  PD 
Sbjct: 389 CKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDE 448

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  LI   C    + +ALNL   M       ++V YNTLIDGFCK   +E+A +++ +
Sbjct: 449 FTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDE 508

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + +S + ++Y  LI+G C    V +A +L  +M+ +G++P   + N+++  +C++GD
Sbjct: 509 MELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGD 568

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA + +  M S G +PD ++Y TLI+G  +   +  A  L+  ++ +G+V     YN 
Sbjct: 569 IKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNP 628

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           ++    ++ R H++  +   M++K   PD  TY  +  G  +    + EA  F  EM++R
Sbjct: 629 VIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIER 688

Query: 480 GFVPD 484
           G +P+
Sbjct: 689 GNIPE 693



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 245/484 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L   +K+   +     M ++ +  D  T+N LI A C+   +  A  +M  M   G
Sbjct: 174 LLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYG 233

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   T+ +++ G  + G  D A  + ++M++ G      T N L+   C++  + +A 
Sbjct: 234 LSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQAL 293

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               E    G  PD  +++TL+    + G    A+     M   GL PD   Y  +I+G 
Sbjct: 294 SFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGL 353

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA+K+ D+M+ + C  + VTYN I++ LC+   + EA ++   +  +G+ PD 
Sbjct: 354 CKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDV 413

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF +LI G C   N   A++LF+ M  K  +PD  TYN LID  C   ++E+A  L  +
Sbjct: 414 CTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 473

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     + N + Y  LI+G+C    + EA  ++ EM  +G+    V+ NT+I G C+S  
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKR 533

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A + + +M+ EG+ PD  +YN+L+  F +  ++ KA  +V  M + G  PD++TY  
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G C+ GR+  +  +L  +  KG+      Y  +I     +N   EA R   EML + 
Sbjct: 594 LISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKS 653

Query: 481 FVPD 484
             PD
Sbjct: 654 EPPD 657



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/457 (32%), Positives = 242/457 (52%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           + PDT  YN L+N       L+      +SM  + ++  V T+N LI  LCK  +   A 
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +++EM   GLSPD  T+ T++       N+  A  I  +M   G     V+ + LI  F
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGF 283

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G++D+AL + +E  S G  PD   Y  ++NG C+ G    A+++ D ML  G   D+
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYN++++GLC+   + EA  + ++M+ R   P+  T+  +I   CK+  +++A  +  +
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARL 403

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +T K I PD+ T+N+LI G C     + A  L+ +M  +   P+  +Y +LI+  CS   
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA  L  EM   G    +V  NT+I G+C++    +A+E   +M  +GV  DS++YNT
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT 523

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  + + ++ A  L+ +M  +GL PD  TYN +LT FC+ G +  +  I+  M   G
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            NPD  TY TLI+G      ++ A R    +  +G V
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMV 620



 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 242/478 (50%), Gaps = 5/478 (1%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM--SGKGLKPGVFT 67
           ++ + ++F    +Q    P +  Y  ++    + G  E   +++  M  SG     G+F 
Sbjct: 77  EVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFL 136

Query: 68  YNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
               +    K    D    ++  M  +  + PDT  YN LL        +   E     M
Sbjct: 137 I--FVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSM 194

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            RR +  D+ +F+ LI    +  Q+  A++   EM S GL PD   +T I+ GY   G +
Sbjct: 195 VRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNL 254

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL+++++M+E GC    VT N ++NG C+   + +A     E +  G  PD +T+ TL
Sbjct: 255 DGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTL 314

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           ++G CK G+   A+ + D M    + PDI TYN+LI G CK+GE+E+A K+   M+SR  
Sbjct: 315 VNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDC 374

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           SPN ++Y  +I+  C    V EA  +   +  KGI P + + N++I+G C S +   A +
Sbjct: 375 SPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMD 434

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              +M  +G  PD  +YN LI+       +++A  L+ +ME  G   +V+ YN ++ GFC
Sbjct: 435 LFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFC 494

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  R+ ++E I   M  +G++ D  TY TLI+G      +++A +  D+M+  G  PD
Sbjct: 495 KNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 244/485 (50%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           ++  L K    +  +  L EM+  G   D   +   + +Y +    +E   ++  M  + 
Sbjct: 103 ILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEY 162

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +KP    YN L+N L    +    +     M++  +  D +T+N L+   C+   +  A
Sbjct: 163 RIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPA 222

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM   G++PD  +F+T++  +   G LD AL    +M   G    +V   ++ING
Sbjct: 223 ILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLING 282

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G + +AL    E + +G   D  TYNT++NGLC+      A ++ + ML  G+ PD
Sbjct: 283 FCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            YT+ +LI G CK G + +A+ + D M  +   P+ VTYN +I   CK   +++A ++  
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + S+ I P+  ++  LI G C   +   A  L+ EM GKG +P   + N +I   C S 
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSR 462

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   L +M   G   + + YNTLI+GF + + +++A  +  +ME QG+  D +TYN
Sbjct: 463 KLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN 522

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+  R+ D+  ++ +MI +GL PD+ TY +L+       ++K+A      M   
Sbjct: 523 TLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSS 582

Query: 480 GFVPD 484
           G  PD
Sbjct: 583 GCNPD 587



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 194/430 (45%), Gaps = 106/430 (24%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +ID A  F+ E   +G  PD  TYNTL+N  C+ G  + A +++++M   G
Sbjct: 279 LINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG 338

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P ++TYNSLI+GLCK G  + A ++LD+M+    SP+  TYN ++   C++  + EA 
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN---------- 170
           EI   ++ +G+ PD+ +F++LI     +     A+  F EMK  G  PD           
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458

Query: 171 -------------------------VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                                    V+Y  +I+G+C+N  + EA ++ DEM  +G   D 
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDS 518

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF---------------------- 243
           VTYNT+++GLC++K + +A  L ++M+  G+ PD +T+                      
Sbjct: 519 VTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQT 578

Query: 244 -------------TTLIHGHCKDGNM---------------------------------- 256
                         TLI G CK G +                                  
Sbjct: 579 MTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638

Query: 257 -NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG-EMEKANKLWADMISRKISPNYISYG 314
            ++A+ LF  M  KS  PD +TY  +  G C  G  + +A     +MI R   P + S+ 
Sbjct: 639 THEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFV 698

Query: 315 ILINGYCSMG 324
           +L  G C++ 
Sbjct: 699 MLAEGLCTLS 708



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 161/297 (54%), Gaps = 7/297 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC   K++ A   L EME  G   + V YNTLI+ +C+   +EEA ++ + M  +G
Sbjct: 454 LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TYN+LI+GLCK  R + A +++D+M+  GL PD  TYN+LL   C+  ++ +A 
Sbjct: 514 VSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAA 573

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M+  G  PDIV+++TLI    + G++  A    R ++  G+V     Y  +I   
Sbjct: 574 DIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQAL 633

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGVFPD 239
            +     EA+++  EML+K    D +TY  +  GLC     + EA D   EM+ERG  P+
Sbjct: 634 FKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPE 693

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKS--IKPDIVTYNTLIDGFCKVGEMEKA 294
           F +F  L  G C     +  + L D++ +K+   + +I T    I GF K+ + + A
Sbjct: 694 FSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREIST----IRGFLKIRKFQDA 746



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 188/396 (47%), Gaps = 11/396 (2%)

Query: 96  LSPDTATYNTLLVESCRKE-NMSEAEEIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQLDR 153
           L PD       L+E+ R++ +   A  +F   S++    P    +  ++    + G  + 
Sbjct: 58  LPPDFTPKQ--LIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEY 115

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK----MRDEMLEKGCVMDVVTYN 209
                 EMK +G   D  ++ I +  Y +     E +     M DE   K    D   YN
Sbjct: 116 MRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKP---DTRFYN 172

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +LN L  A  L   +   + M+ R +  D  TF  LI   CK   +  A+ + + M   
Sbjct: 173 VLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSY 232

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            + PD  T+ T++ G+ + G ++ A ++   M+        ++  +LING+C  G + +A
Sbjct: 233 GLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQA 292

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
                E V +G +P   + NT++ G C+ G A  A E +  M+  G+DPD  +YN+LI+G
Sbjct: 293 LSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISG 352

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             +   +++A  ++ +M ++   P+ +TYN I++  C++ R+ ++  I   +  KG+ PD
Sbjct: 353 LCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPD 412

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             T+ +LI G    +N K A    +EM  +G  PD+
Sbjct: 413 VCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDE 448


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 258/485 (53%), Gaps = 3/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYP-DTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC++ ++D+A          G++  D + +NTLI  YCR G    A  + + M+ +
Sbjct: 141 LLAGLCRNGQVDAAAAL--ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQ 198

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL   V  YN+L+ G C+ G+ D A+ VLD M + G+ P+ ATY   +V  CR + + EA
Sbjct: 199 GLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++  M R GV  D+V+ S L+    R+G+   A   FREM   G  P++V Y  +I+ 
Sbjct: 259 FDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDS 318

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G   E L +  EM+ +G VMD+VTY  +++ L +     E  D     L   + P+
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPN 378

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T LI   CK  N+++A  +   M +KSI P++VT++++I+GF K G ++KA +   
Sbjct: 379 GVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  R I+PN ++YG LI+G+        A  ++++M+ +G+K      ++++ G  ++G
Sbjct: 439 MMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNG 498

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A          G+  D ++Y TLI+G  +  +M  AF    ++ ++ ++PD + YN
Sbjct: 499 KIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYN 558

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V +   C  G+  +++  L  M   GL PD+STY T+I  H  +    +A +   EM   
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618

Query: 480 GFVPD 484
              P+
Sbjct: 619 SIKPN 623



 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 256/486 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC+D +   A     EM++ G  P+ VTY TLI++  + G  +E   L+  M  +G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   + TY +L++ L K+G+ D  K+ L   L   LSP+  TY  L+   C+  N+ EAE
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  + ++P++V+FS++I  F + G LD+A  Y R MK  G+ P+ V Y  +I+G+
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      AL++  +ML +G  ++    ++++NGL +   + EA  LF +    G+  D 
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TTLI G  K G+M  A      +  +++ PD V YN  I+  C +G+ ++A     +
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  + P+  +Y  +I  +C  G   +A +L +EM    IKP L++ NT++ G   +G 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L++MVS G  P S+++  ++    +   +D    +   M N GL  D+  YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L   C  G    + ++L  M+  G+ PD  T+  LI GH   ++L  AF  + +ML + 
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 481 FVPDDA 486
             P+ A
Sbjct: 760 ISPNIA 765



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 225/438 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L ++ KI+ A     +    G+  D V Y TLI+   + G +  AF+    +  + 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    YN  IN LC  G+   AK  L EM  MGL PD +TYNT++V  CRK   ++A 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM    + P++++++TL+      G +++A     EM SAG  P ++ +  ++   
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++  +   L + + M+  G   D+  YNT+L  LC   M  +A  +  EML  G+ PD 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI GHCK  +++ A   +  M  ++I P+I T+NTL+ G   VG + +A  +  +
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + PN ++Y IL  G+    +  EA RL+ EMVGKG  P + + N +I  + ++G 
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A E    M   GV P S +Y+ L++G+ R  N  +    +  M+ +G  P   T + 
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909

Query: 421 ILTGFCRQGRMHDSELIL 438
           I   F + G    ++ +L
Sbjct: 910 ICRAFSKPGMTWQAQRLL 927



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 253/518 (48%), Gaps = 35/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK H +D A+  L EME+K + P+ VT++++IN + + G L++A +    M  +G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 61  LKPGVFTY-----------------------------------NSLINGLCKKGRCDRAK 85
           + P V TY                                   +SL+NGL + G+ + A 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  +    GLS D   Y TL+    +  +M  A +   E+  R + PD V ++  I   
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+   A  +  EM++ GL PD   Y  +I  +CR G   +ALK+  EM       ++
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TYNT++ GL     + +A  L NEM+  G  P   T   ++    +   ++  L++ + 
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    +  DI  YNTL+   C  G   KA  +  +M+   I+P+ I++  LI G+C   H
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  AF  + +M+ + I P + + NT++ G    G   +A   L +M   G++P++++Y+ 
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L  G  ++ N  +A  L  +M  +G VP V TYN +++ F + G M  ++ +   M ++G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           ++P   TY  L++G     N  E  +   +M ++GF P
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 193/370 (52%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N LC   K   AK FL EM   G+ PD  TYNT+I ++CR+G   +A +L++ M    +
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP + TYN+L+ GL   G  ++AK +L+EM+  G SP + T+  +L    +   +    +
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           I   M   G+  DI  ++TL+ +   +G   +A +   EM  +G+ PD + +  +I G+C
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++  +  A     +ML +    ++ T+NT+L GL     + EA  +  EM + G+ P+  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  L  GH K  N  +A+ L+  M  K   P + TYN LI  F K G M +A +L+ DM
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R + P   +Y IL++G+  + + TE  +   +M  KG  P+  + + I + + + G  
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 362 SKADEFLSKM 371
            +A   L  +
Sbjct: 921 WQAQRLLKNL 930



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 115/231 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC       A + L EM   G+ PDT+T+N LI  +C+   L+ AF     M  + 
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + T+N+L+ GL   GR   A  VL EM + GL P+  TY+ L     ++ N  EA 
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++CEM  +G  P + +++ LI  F++ G + +A   F++M+  G+ P +  Y I+++G+
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            R     E  K   +M EKG      T + I     +  M  +A  L   +
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/94 (22%), Positives = 45/94 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K   +  AK    +M+++GV+P + TY+ L++ + R     E  + +  M  KG
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
             P   T + +     K G   +A+ +L  + ++
Sbjct: 900 FSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 256/484 (52%), Gaps = 35/484 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  T+N +I+  C+EG L EA  L+  M   G  P V TYNSLI+G  K G  +  +++
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           + EM   G  PD  TYN L+   C+   M  A   F EM R GV  ++V+FST +  F +
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           NG +  A+  F +M+  G+ P+ V YT +++G C+ G + +AL + +EM+++G  ++VVT
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y  +++GLC+   + EA+D+F  M   G+  +   +TTLIHGH    N  +AL+L   M 
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMK 431

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM--------------------ISRKIS 307
            K ++ D+  Y  LI G C + ++++A  L   M                     +RK S
Sbjct: 432 DKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKES 491

Query: 308 ---------------PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
                          PN ++Y  L++G C  G + EA   + +MV  G++P + +   ++
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALV 551

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G C++G   KA   L +M+ +G+  D++   +L++G +++ N+  AFAL +KM N GL 
Sbjct: 552 DGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQ 611

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            D+  Y   + GFC    + ++  +L  MIE G+ PD   Y  LIN      N++EA   
Sbjct: 612 LDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAIL 671

Query: 473 HDEM 476
            +EM
Sbjct: 672 QNEM 675



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 132/408 (32%), Positives = 231/408 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN  CK  +++ A  +  EM+++GV  + VT++T ++A+C+ G + EA +L   M  KG
Sbjct: 270 LVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKG 329

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TY  L++G CK GR D A  + +EM+Q G+  +  TY  L+   C++  ++EAE
Sbjct: 330 MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAE 389

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R G+  + + ++TLI         +RAL    EMK  G+  D  LY  +I G 
Sbjct: 390 DVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGL 449

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA  + ++M E G   + V Y  I++   +A+  +EA  L  +M++ G  P+ 
Sbjct: 450 CNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNI 509

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L+ G CK G++++A++ F+ M    ++P++  Y  L+DG CK G ++KA  L  +
Sbjct: 510 VTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDE 569

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI + +S + +    L++G+   G++ +AF L  +M+  G++  L      + G+C    
Sbjct: 570 MIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNM 629

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +A E LS+M+  G+ PD++ YN LIN   +  NM++A  L ++ME+
Sbjct: 630 IQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMES 677



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 253/497 (50%), Gaps = 41/497 (8%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           ++   P  V  +TL++     G L++A   +  +    + P   T N ++  L +    +
Sbjct: 123 RRSALPSVV--DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLAR----E 176

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           R+ E+   + +   +P+  T+N ++   C++ +++EA  +   M   G +PD+V++++LI
Sbjct: 177 RSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLI 236

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             + + G+L+       EM+  G  PD V Y  ++N +C+ G +  A     EM  +G +
Sbjct: 237 DGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVM 296

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            +VVT++T ++  C+  M+ EA  LF +M  +G+ P+  T+T L+ G CK G ++ AL L
Sbjct: 297 ANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVL 356

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEM------------------------------- 291
            + M Q+ +  ++VTY  L+DG CK G++                               
Sbjct: 357 TNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFV 416

Query: 292 ----EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
               E+A  L ++M  + +  +   YG LI G C++  + EA  L  +M   G+KP  V 
Sbjct: 417 YKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVI 476

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              I+    ++   S+A   L KM+  G  P+ ++Y  L++G  +  ++D+A +  +KM 
Sbjct: 477 YTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV 536

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           + GL P+V  Y  ++ G C+ GR+  + L+L  MI+KG++ D    T+L++GH+ Q NL+
Sbjct: 537 DLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQ 596

Query: 468 EAFRFHDEMLQRGFVPD 484
           +AF    +M+  G   D
Sbjct: 597 DAFALKAKMINSGLQLD 613


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  284 bits (726), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 154/476 (32%), Positives = 252/476 (52%), Gaps = 1/476 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG-FLEEAFQLMNSMSGKGLKPGVFTYN 69
           ID A      M  +   P  + +  L++A  + G +      L   M   GL P ++T +
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI+      R D A  V  +M+++GL PD  T+NTL+   C+    ++A E F +    
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  P + +++T+I    + G+   A   F++M+ AG  P+ V Y I+I+  C++  V EA
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           L +   M  K    D+ TYN+++ GLC  +   EA  L NEM    + P+ +TF  L+  
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK+G +++A  +F  MT+  ++PD+VTY++L+ G+    E+ +A KL+  MI++   P+
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             SY ILI GYC    + EA +L+ EM+ +G+ P  V+ NT+I G C+ G   +A +   
Sbjct: 375 AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M S G  PD  +Y+ L++GF +E  + KAF L   M++  L PD+  YN+++   C+ G
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG 494

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            + D+  +   +  +GL P+   YTT+IN    +  L EA      M   G  PD+
Sbjct: 495 NLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDE 550



 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/417 (35%), Positives = 224/417 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  K   A  F  + E  G  P   TY T+IN  C+ G    A  L   M   G
Sbjct: 171 LINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG 230

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN LI+ LCK    + A ++   M    +SPD  TYN+L+   C      EA 
Sbjct: 231 CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEAS 290

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+   + P+I +F+ L+    + G++  A   F+ M   G+ PD V Y+ ++ GY
Sbjct: 291 ALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGY 350

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                ++EA K+ D M+ KGC  D  +YN ++ G C+AK + EA  LFNEM+ +G+ PD 
Sbjct: 351 SLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDN 410

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TLIHG C+ G + +A +LF  M      PD+ TY+ L+DGFCK G + KA +L+  
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRV 470

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  + P+   Y ILI+  C  G++ +A +L+ E+  +G+ P +    TII   C+ G 
Sbjct: 471 MQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGL 530

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
             +A E    M  +G  PD  SYN +I GF++ ++  +A  L+ +M ++G V +  T
Sbjct: 531 LDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 244/454 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++      ++D A     +M + G+ PD VT+NTLIN  C+ G   +A +  +     G
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG 195

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V+TY ++INGLCK G    A  +  +M + G  P+  TYN L+   C+ + ++EA 
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEAL 255

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M  + ++PDI ++++LI       +   A     EM S  ++P+   + ++++  
Sbjct: 256 DIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAI 315

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  +   M E G   DVVTY++++ G      + EA  LF+ M+ +G  PD 
Sbjct: 316 CKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDA 375

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  LI G+CK   +++A  LF+ M  + + PD V YNTLI G C++G + +A  L+ +
Sbjct: 376 FSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKN 435

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    P+  +Y +L++G+C  G++ +AFRL+  M    +KP +   N +I   C+ G+
Sbjct: 436 MHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGN 495

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S++  +G+ P+   Y T+IN   +E  +D+A      ME  G  PD  +YNV
Sbjct: 496 LKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNV 555

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           I+ GF +      +  ++  M ++G   +  T T
Sbjct: 556 IIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 244/465 (52%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME  G+ PD  T + LI+ +     ++ AF + + M   GL+P   T+N+LINGLCK G
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A E  D+    G  P   TY T++   C+    + A  +F +M   G  P++V+++
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI    ++  ++ AL  F  MK+  + PD   Y  +I G C      EA  + +EM   
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + ++ T+N +++ +C+   ++EA  +F  M E GV PD  T+++L++G+     + +A
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             LFD M  K  KPD  +YN LI G+CK   +++A +L+ +MI + ++P+ ++Y  LI+G
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + EA  L+  M   G  P L + + ++ G+C+ G   KA      M S  + PD
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              YN LI+   +  N+  A  L S++  QGL+P+V  Y  I+   C++G + ++     
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFR 539

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   G  PD  +Y  +I G +   +   A +   EM  RGFV +
Sbjct: 540 NMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAE 584



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 129/362 (35%), Positives = 202/362 (55%)

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           +M   G++PDI + S LI  FS   ++D A   F +M   GL PD V +  +ING C+ G
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
              +A++  D+    GC   V TY TI+NGLC+    T A  LF +M E G  P+  T+ 
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI   CKD  +N+AL++F  M  K I PDI TYN+LI G C     ++A+ L  +M S 
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            I PN  ++ +L++  C  G V+EA  ++  M   G++P +V+ ++++ GY    +  +A
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            +    M+++G  PD+ SYN LI G+ + + +D+A  L ++M +QGL PD + YN ++ G
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C+ GR+ +++ +   M   G  PD  TY+ L++G   +  L +AFR    M      PD
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479

Query: 485 DA 486
            A
Sbjct: 480 IA 481


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  284 bits (726), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 265/484 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D AK     M  KGV P+  TY  LI+ Y   G  +E  Q++  MS  G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P  + Y  L++ LCK GRC  A+ + D +++ G+ P+   Y  LL     + ++SE  
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M   GV+PD   F+ +   +++   +D A+  F +M+   L P+ V Y  +I+  
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDAL 387

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A+   ++M+++G   D+  +++++ GLC      +A++LF E+L++G+  D 
Sbjct: 388 CKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDT 447

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F TL+   C++G + +A  L D+M +  ++PD+++YNTL+DG C  G +++A KL   
Sbjct: 448 VFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDV 507

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++S  + P+ ++Y  L++GYC    + +A+ L+ EM+ KG+ P +V+ NTI+ G  ++G 
Sbjct: 508 IVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGR 567

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A E    M++     +  +YN +ING  +   +D+AF +   + ++ L  D+ T N+
Sbjct: 568 FSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANI 627

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  D+  +   +   GL PD  TY  +    + + +L+E       M + G
Sbjct: 628 MIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENG 687

Query: 481 FVPD 484
             P+
Sbjct: 688 TAPN 691



 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 255/478 (53%), Gaps = 5/478 (1%)

Query: 1   MVNALCKDHKIDSAK-MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC   ++D A  + L  M + G  PD  +Y+ L+  +C E   EEA +L++ M+  
Sbjct: 134 LLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADD 193

Query: 60  G---LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
           G     P V TY ++I+GLCK    DRAK V   M+  G+ P+  TY  L+         
Sbjct: 194 GDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKW 253

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            E  ++  EMS  G+ PD   ++ L+    +NG+   A   F  +   G+ P+  +Y I+
Sbjct: 254 KEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGIL 313

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++GY   G + E     D M+  G   D   +N +     +  M+ EA  +F++M ++ +
Sbjct: 314 LHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRL 373

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+  T+  LI   CK G ++ A+  F+ M  + + PDI  +++L+ G C V + EKA +
Sbjct: 374 SPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEE 433

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+ +++ + I  + + +  L+   C  G V EA RL   M+  G++P ++S NT++ G+C
Sbjct: 434 LFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHC 493

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
            +G   +A + L  +VS G+ PD ++YNTL++G+ +   +D A++L  +M  +GL PDV+
Sbjct: 494 LTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVV 553

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR-FH 473
           TYN IL G  + GR  +++ +   MI      +  TY  +ING    N + EAF+ FH
Sbjct: 554 TYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFH 611



 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 248/464 (53%), Gaps = 5/464 (1%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG-VFTYNSLINGLCKKGRCDRA 84
           V P + TY  LI  +CR G L+  F     +   G +      ++ L+ GLC   R D A
Sbjct: 88  VAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEA 147

Query: 85  KEV-LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG---VAPDIVSFST 140
            ++ L  M + G +PD  +Y+ LL   C ++   EA E+   M+  G     P++V+++T
Sbjct: 148 TDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTT 207

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I    +   +DRA   F+ M   G+ P+N  YT +I+GY   G   E ++M  EM   G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D   Y  +L+ LC+    TEA ++F+ ++ +G+ P+   +  L+HG+  +G++++  
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +  D+M    + PD   +N +   + K   +++A  ++  M  +++SPN ++YG LI+  
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDAL 387

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +G V +A   + +M+ +G+ P +   ++++ G C      KA+E   +++ +G+  D+
Sbjct: 388 CKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDT 447

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           + +NTL+    RE  + +A  L+  M   G+ PDVI+YN ++ G C  GR+ ++  +L  
Sbjct: 448 VFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDV 507

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  GL PD+ TY TL++G+     + +A+    EML +G  PD
Sbjct: 508 IVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPD 551



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 219/411 (53%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL  M   GV PD   +N +  AY ++  ++EA  + + M  + L P + TY +LI+ LC
Sbjct: 329 FLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALC 388

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K GR D A    ++M+  G++PD   +++L+   C  +   +AEE+F E+  +G+  D V
Sbjct: 389 KLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTV 448

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
            F+TL+    R G++  A      M   G+ PD + Y  +++G+C  G + EA K+ D +
Sbjct: 449 FFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVI 508

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           +  G   D VTYNT+L+G C+A+ + +A  LF EML +G+ PD  T+ T++HG  + G  
Sbjct: 509 VSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRF 568

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A  L+  M     + +I TYN +I+G CK   +++A K++  + S+ +  +  +  I+
Sbjct: 569 SEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIM 628

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I      G   +A  L+  +   G+ P + +   I +   + G   + DE  S M   G 
Sbjct: 629 IGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGT 688

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
            P+S   N L+   +   ++++A A +SK++ +    +  T +++++ + R
Sbjct: 689 APNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSR 739



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 214/405 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M  A  K   ID A     +M Q+ + P+ VTY  LI+A C+ G +++A    N M  +G
Sbjct: 348 MFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEG 407

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +F ++SL+ GLC   + ++A+E+  E+L  G+  DT  +NTL+   CR+  + EA+
Sbjct: 408 MTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQ 467

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R GV PD++S++TL+      G++D A      + S GL PD V Y  +++GY
Sbjct: 468 RLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGY 527

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A  +  EML KG   DVVTYNTIL+GL +    +EA +L+  M+      + 
Sbjct: 528 CKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNI 587

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+  +I+G CK+  +++A  +F  +  K ++ DI T N +I    K G  E A  L+A 
Sbjct: 588 YTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFAT 647

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +  + P+  +Y ++       G + E   L+  M   G  P     N +++     GD
Sbjct: 648 ISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGD 707

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            ++A  +LSK+  +    ++ + + LI+ + R E    A +L  K
Sbjct: 708 INRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSLPEK 752



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 208/415 (50%), Gaps = 11/415 (2%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE---EIFCEMSRR---GVAPDIVS 137
           A ++ DEML          +N LL    R    S +E    +F  M R     VAP   +
Sbjct: 35  ALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFT 94

Query: 138 FSTLIGIFSRNGQLDRALMYFRE-MKSAGLVPDNVLYTIIINGYCRNGFVLEALK-MRDE 195
           ++ LIG F R G+L      F   +K+   V D V+++ ++ G C    V EA   +   
Sbjct: 95  YTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRR 154

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG---VFPDFYTFTTLIHGHCK 252
           M E GC  DV +Y+ +L G C  K   EA +L + M + G     P+  T+TT+I G CK
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
              +++A  +F  M  K ++P+  TY  LI G+  +G+ ++  ++  +M +  + P+   
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYI 274

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y +L++  C  G  TEA  ++  ++ KGIKP +     ++ GY   G  S+   FL  MV
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMV 334

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
             GV PD   +N +   + ++  +D+A  +  KM  Q L P+++TY  ++   C+ GR+ 
Sbjct: 335 GNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVD 394

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           D+ L   +MI++G+ PD   +++L+ G  + +  ++A     E+L +G   D  F
Sbjct: 395 DAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVF 449



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 153/312 (49%), Gaps = 19/312 (6%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD---DLFNEMLER---GVFPDFY 241
           +ALK+ DEML       V  +N +L  + RA+  + ++    LFN M+      V P  +
Sbjct: 34  DALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSF 93

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP-DIVTYNTLIDGFCKVGEMEKANKLWAD 300
           T+T LI   C+ G +      F ++ +   +  D V ++ L+ G C    +++A     D
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEAT----D 149

Query: 301 MISRKI-----SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG---IKPTLVSCNTII 352
           ++ R++     +P+  SY IL+ G+C+     EA  L   M   G     P +V+  T+I
Sbjct: 150 ILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVI 209

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G C++    +A      M+ +GV P++ +Y  LI+G++      +   ++ +M   GL 
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQ 269

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           PD   Y V+L   C+ GR  ++  I   +I KG+ P+ + Y  L++G+ ++ +L E   F
Sbjct: 270 PDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSF 329

Query: 473 HDEMLQRGFVPD 484
            D M+  G  PD
Sbjct: 330 LDLMVGNGVSPD 341


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  284 bits (726), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 164/519 (31%), Positives = 273/519 (52%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C+ H++   +  L  M +    PD VT+N LINA C  G    A   ++ M   G
Sbjct: 253 MICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSG 312

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V T+ ++++ LC++G    A+++ D +  MG++P+ A YNTL+    +   +++A 
Sbjct: 313 VEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQAS 372

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM   GV+PD V+F+ L+    + G+++ +    +++  +GL  D+ LY ++++  
Sbjct: 373 LLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSL 432

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTY-------------------------------- 208
           C  G + EA+K+  E+LEKG  + VV +                                
Sbjct: 433 CWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSS 492

Query: 209 ---NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
              N++L GLCR   L EA  L   MLE+G   +   +T L+ G+ K  N+  A  L+  
Sbjct: 493 STCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKE 552

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++ I PD V +  LIDG  K G +E+A +++ +M +    PN  +Y  LI G C  G 
Sbjct: 553 MKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGR 612

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           VTEA +L  EM  KG+     + N II G+CR G    A E    M   G+ PD  ++N 
Sbjct: 613 VTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNI 672

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI G+ +  +M  A  +V+KM + GL PD+ TYN  + G+CR  +M+ + +IL ++I  G
Sbjct: 673 LIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAG 732

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + PD  TY T+++G +  + L  A     ++L+ GF+P+
Sbjct: 733 IVPDTVTYNTMLSG-ICSDILDRAMILTAKLLKMGFIPN 770



 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/486 (30%), Positives = 264/486 (54%), Gaps = 3/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC++  +  A+     ++  G+ P+   YNTL++ Y +   + +A  L   M   G
Sbjct: 323 ILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTG 382

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+N L+ G  K GR + +  +L +++  GL  D++ Y+ ++   C    + EA 
Sbjct: 383 VSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAM 442

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E+  +G+   +V+F++LIG +SR G  D+A   +R M   G  P +     ++ G 
Sbjct: 443 KLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGL 502

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G++ EA  +   MLEKG  ++ V Y  +L+G  +   L  A  L+ EM ERG++PD 
Sbjct: 503 CRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDA 562

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             FT LI G  K GN+ +A  +F  M+     P+   YN+LI G C  G + +A KL  +
Sbjct: 563 VAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKE 622

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + +  +  ++ I+I+G+C  G +  A   + +M   G+ P + + N +I GYC++ D
Sbjct: 623 MRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFD 682

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E ++KM S G+DPD  +YNT ++G+ R   M++A  ++ ++ + G+VPD +TYN 
Sbjct: 683 MVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNT 742

Query: 421 ILTGFCRQGRMHDSELIL-WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +L+G C    + D  +IL  ++++ G  P+  T   L++    Q   ++A  +  ++ + 
Sbjct: 743 MLSGICSD--ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREI 800

Query: 480 GFVPDD 485
            F  D+
Sbjct: 801 SFGFDE 806



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 248/465 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M  KG  P  +T+N +I  +CR+  +     L++ M      P V T+N LIN  C  G
Sbjct: 237 DMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGG 296

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A + L  M++ G+ P  AT+ T+L   CR+ N+ EA ++F  +   G+AP+   ++
Sbjct: 297 RTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYN 356

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  + +  ++ +A + + EM++ G+ PD V + I++ G+ + G + ++ ++  +++  
Sbjct: 357 TLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVS 416

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  +D   Y+ +++ LC A  L EA  L  E+LE+G+      F +LI  + + G  +KA
Sbjct: 417 GLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKA 476

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
              + IM +    P   T N+L+ G C+ G +++A  L   M+ +    N ++Y +L++G
Sbjct: 477 FEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDG 536

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y  M ++  A  LW EM  +GI P  V+   +I G  ++G+  +A E   +M + G  P+
Sbjct: 537 YFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPN 596

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           + +YN+LI G      + +A  L  +M  +GL+ D  T+N+I+ GFCR+G+M  +     
Sbjct: 597 NFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFL 656

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   GL PD  T+  LI G+    ++  A    ++M   G  PD
Sbjct: 657 DMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPD 701



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 253/534 (47%), Gaps = 70/534 (13%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   GV P   +   L+    R G     ++L   M  KG +P   T+N++I G C++ R
Sbjct: 203 MRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHR 262

Query: 81  CDRAKEVLDEMLQMGLSPDTATYN-----------------------------------T 105
               + +L  M +   SPD  T+N                                   T
Sbjct: 263 VVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTT 322

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           +L   CR+ N+ EA ++F  +   G+AP+   ++TL+  + +  ++ +A + + EM++ G
Sbjct: 323 ILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTG 382

Query: 166 LVPDNV-----------------------------------LYTIIINGYCRNGFVLEAL 190
           + PD V                                   LY ++++  C  G + EA+
Sbjct: 383 VSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAM 442

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+  E+LEKG  + VV +N+++    RA +  +A + +  M+  G  P   T  +L+ G 
Sbjct: 443 KLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGL 502

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+ G + +A  L   M +K    + V Y  L+DG+ K+  +E A  LW +M  R I P+ 
Sbjct: 503 CRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDA 562

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +++  LI+G    G+V EA+ ++ EM   G  P   + N++I+G C  G  ++A +   +
Sbjct: 563 VAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKE 622

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  +G+  D+ ++N +I+GF R   M  A      M+  GL+PD+ T+N+++ G+C+   
Sbjct: 623 MRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFD 682

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M  +  I+ +M   GL+PD +TY T ++G+     + +A    D+++  G VPD
Sbjct: 683 MVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPD 736



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 227/456 (49%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D    NTL+  +   G   EA +++  M G G++PG+ +   L+  L + G      ++ 
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            +M+  G  P   T+N ++   CR+  +   E +   M +   +PD+V+F+ LI      
Sbjct: 236 KDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIG 295

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+   A+ +   M  +G+ P    +T I++  CR G V+EA K+ D + + G   +   Y
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           NT+++G  +A+ + +A  L+ EM   GV PD  TF  L+ GH K G +  +  L   +  
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIV 415

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             +  D   Y+ ++   C  G +++A KL  +++ + ++ + +++  LI  Y   G   +
Sbjct: 416 SGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDK 475

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           AF  +  MV  G  P+  +CN+++ G CR G   +A   L +M+ +G   + ++Y  L++
Sbjct: 476 AFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLD 535

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ +  N++ A  L  +M+ +G+ PD + +  ++ G  + G + ++  +   M   G  P
Sbjct: 536 GYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVP 595

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   Y +LI G      + EA +   EM Q+G + D
Sbjct: 596 NNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSD 631



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 156/286 (54%), Gaps = 1/286 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K + ++ A+    EM+++G+YPD V +  LI+   + G +EEA+++   MS  G
Sbjct: 533 LLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIG 592

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  F YNSLI GLC  GR   A ++  EM Q GL  DT T+N ++   CR+  M  A 
Sbjct: 593 FVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAI 652

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E F +M R G+ PDI +F+ LIG + +   +  A     +M S GL PD   Y   ++GY
Sbjct: 653 ETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGY 712

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   + +A+ + D+++  G V D VTYNT+L+G+C + +L  A  L  ++L+ G  P+ 
Sbjct: 713 CRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNV 771

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
            T   L+   CK G   KAL     + + S   D ++Y  L   +C
Sbjct: 772 ITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYC 817



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A     EM QKG+  DT T+N +I+ +CR G ++ A +    M   G
Sbjct: 603 LIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIG 662

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P +FT+N LI G CK      A E++++M   GL PD  TYNT +   CR   M++A 
Sbjct: 663 LLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAV 722

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            I  ++   G+ PD V+++T++ GI S    LDRA++   ++   G +P+ +   ++++ 
Sbjct: 723 IILDQLISAGIVPDTVTYNTMLSGICS--DILDRAMILTAKLLKMGFIPNVITTNMLLSH 780

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G   +AL    ++ E     D ++Y  +    C   ++ +  +L     E+ +F D
Sbjct: 781 FCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYC---LMQDDVELVRGTYEKHLFMD 837

Query: 240 FYTFTTL 246
           F  + T 
Sbjct: 838 FLMYITF 844



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 129/260 (49%)

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           LF +M+ +G  P   TF  +I G C+   +    +L  +M +    PD+VT+N LI+  C
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
             G    A      M+   + P+  ++  +++  C  G+V EA +L+  +   GI P   
Sbjct: 294 IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAA 353

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
             NT++ GY ++ + ++A     +M + GV PD +++N L+ G  +   ++ +  L+  +
Sbjct: 354 IYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDL 413

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
              GL  D   Y+V+++  C  GR+ ++  +L  ++EKGL      + +LI  +      
Sbjct: 414 IVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLE 473

Query: 467 KEAFRFHDEMLQRGFVPDDA 486
            +AF  +  M++ GF P  +
Sbjct: 474 DKAFEAYRIMVRCGFTPSSS 493



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 118/249 (47%)

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           DF    TL+ G    G   +AL +  +M    ++P + +   L+    ++G+     KL+
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            DMI +   P+ +++  +I G+C    V     L + M      P +V+ N +I   C  
Sbjct: 236 KDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIG 295

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A ++L  MV  GV+P   ++ T+++   RE N+ +A  L   +++ G+ P+   Y
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N ++ G+ +   +  + L+   M   G++PD  T+  L+ GH     ++++ R   +++ 
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIV 415

Query: 479 RGFVPDDAF 487
            G   D + 
Sbjct: 416 SGLFLDSSL 424


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  284 bits (726), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 258/485 (53%), Gaps = 3/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYP-DTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC++ ++D+A          G++  D + +NTLI  YCR G    A  + + M+ +
Sbjct: 141 LLAGLCRNGQVDAAAAL--ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQ 198

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL   V  YN+L+ G C+ G+ D A+ VLD M + G+ P+ ATY   +V  CR + + EA
Sbjct: 199 GLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++  M R GV  D+V+ S L+    R+G+   A   FREM   G  P++V Y  +I+ 
Sbjct: 259 FDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDS 318

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G   E L +  EM+ +G VMD+VTY  +++ L +     E  D     L   + P+
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPN 378

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T LI   CK  N+++A  +   M +KSI P++VT++++I+GF K G ++KA +   
Sbjct: 379 GVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  R I+PN ++YG LI+G+        A  ++++M+ +G+K      ++++ G  ++G
Sbjct: 439 MMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNG 498

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A          G+  D ++Y TLI+G  +  +M  AF    ++ ++ ++PD + YN
Sbjct: 499 KIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYN 558

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V +   C  G+  +++  L  M   GL PD+STY T+I  H  +    +A +   EM   
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618

Query: 480 GFVPD 484
              P+
Sbjct: 619 SIKPN 623



 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 256/486 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC+D +   A     EM++ G  P+ VTY TLI++  + G  +E   L+  M  +G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   + TY +L++ L K+G+ D  K+ L   L   LSP+  TY  L+   C+  N+ EAE
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  + ++P++V+FS++I  F + G LD+A  Y R MK  G+ P+ V Y  +I+G+
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      AL++  +ML +G  ++    ++++NGL +   + EA  LF +    G+  D 
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TTLI G  K G+M  A      +  +++ PD V YN  I+  C +G+ ++A     +
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  + P+  +Y  +I  +C  G   +A +L +EM    IKP L++ NT++ G   +G 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L++MVS G  P S+++  ++    +   +D    +   M N GL  D+  YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L   C  G    + ++L  M+  G+ PD  T+  LI GH   ++L  AF  + +ML + 
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 481 FVPDDA 486
             P+ A
Sbjct: 760 ISPNIA 765



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 243/494 (49%), Gaps = 35/494 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK H +D A+  L EME+K + P+ VT++++IN + + G L++A +    M  +G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 61  LKPGVFTY-----------------------------------NSLINGLCKKGRCDRAK 85
           + P V TY                                   +SL+NGL + G+ + A 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  +    GLS D   Y TL+    +  +M  A +   E+  R + PD V ++  I   
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+   A  +  EM++ GL PD   Y  +I  +CR G   +ALK+  EM       ++
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TYNT++ GL     + +A  L NEM+  G  P   T   ++    +   ++  L++ + 
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    +  DI  YNTL+   C  G   KA  +  +M+   I+P+ I++  LI G+C   H
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  AF  + +M+ + I P + + NT++ G    G   +A   L +M   G++P++++Y+ 
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L  G  ++ N  +A  L  +M  +G VP V TYN +++ F + G M  ++ +   M ++G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 446 LNPDRSTYTTLING 459
           ++P   TY  L++G
Sbjct: 865 VHPTSCTYDILVSG 878



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 210/403 (52%), Gaps = 3/403 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L ++ KI+ A     +    G+  D V Y TLI+   + G +  AF+    +  + 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    YN  IN LC  G+   AK  L EM  MGL PD +TYNT++V  CRK   ++A 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM    + P++++++TL+      G +++A     EM SAG  P ++ +  ++   
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++  +   L + + M+  G   D+  YNT+L  LC   M  +A  +  EML  G+ PD 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI GHCK  +++ A   +  M  ++I P+I T+NTL+ G   VG + +A  +  +
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + PN ++Y IL  G+    +  EA RL+ EMVGKG  P + + N +I  + ++G 
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF---VREENMDKAF 400
            ++A E    M   GV P S +Y+ L++G+    RE+     +
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTY 892


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  284 bits (726), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 160/502 (31%), Positives = 266/502 (52%), Gaps = 32/502 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C  +++DSA   L +M + G  P+++ Y  LI+A      + EA +L+  M   G
Sbjct: 206 VMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMG 265

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-------------------QMG------ 95
            +P V T+N +I+GLCK GR   A ++ D ML                   +MG      
Sbjct: 266 CEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR 325

Query: 96  ------LSPDTATYNTLLVESCRKENMSEAEEI-FCEMSRRGVAPDIVSFSTLIGIFSRN 148
                  +P+T  YNTL+          EA+++ +  M   G  PD  +F+ +I    + 
Sbjct: 326 AMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKK 385

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L  AL +  EM   G  P+ + YTI+I+G+C+ G   EA K+ + M  KG  ++ V Y
Sbjct: 386 GYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGY 445

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N ++  LC+   + +A  ++ EM  +G  PD YTF +LI+G CK+  M +AL L+  M  
Sbjct: 446 NCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL 505

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           + +  + VTYNTLI  F ++  +++A+KL  +M  R    + I+Y  LI   C  G   +
Sbjct: 506 EGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEK 565

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
              L  +M G+ I P++ SCN +I  +CR+G  + A +FL  M+  G+ PD ++YN+LIN
Sbjct: 566 CLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLIN 625

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  +     +A  L + ++ +G+ PD +TYN +++ +C +G  +D+  +L++ +  G  P
Sbjct: 626 GLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIP 685

Query: 449 DRSTYTTLINGHVSQNNLKEAF 470
           +  T++ LIN  V  N+  E F
Sbjct: 686 NEITWSILINYFVKNNSDSEQF 707



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/425 (36%), Positives = 236/425 (55%), Gaps = 7/425 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLM-NSMSGK 59
           +++ LC+  K+D A+  L ++      P+TV YNTLIN Y   G  EEA  L+  +M   
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P  FT+N +I+GLCKKG    A E LDEM++ G  P+  TY  L+   C++ +  EA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++   MS +G++ + V ++ LIG   ++G++  AL  + EM S G  PD   +  +I G
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+N  + EAL +  +ML +G + + VTYNT+++   R +++ +AD L  EM  RG   D
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  LI   CK G   K L L + M  + I P I + N LI+ FC+ G++  A +   
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DMI R ++P+ ++Y  LING C MG   EA  L+  +  KGI P  V+ NT+I  YC  G
Sbjct: 607 DMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEG 666

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             + A + L K VS G  P+ I+++ LIN FV+  +  + F ++  M N G     I  +
Sbjct: 667 LFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL--MGNWGFWLAAIIRH 724

Query: 420 VILTG 424
           V   G
Sbjct: 725 VSSIG 729



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 232/462 (50%), Gaps = 10/462 (2%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG--LKPGVFTYNSLINGLCKKGR 80
           Q+G       Y  LI+     G  +   +L+  M  +G   K  +F       G  K G 
Sbjct: 87  QRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYG--KAGL 144

Query: 81  CDRAKEVLDEMLQM-GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             +A  +L +M  +    P   +YN +L           A  +F +M  RG++P + +F 
Sbjct: 145 PGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFG 204

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            ++  F    ++D A    R+M   G VP++++Y ++I+    N  V EA+K+ +EM   
Sbjct: 205 VVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLM 264

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           GC  DV T+N +++GLC+A  + EA  L + ML R    D      L+HG C+ G +++A
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK-LWADMISRKISPNYISYGILIN 318
                 M  K   P+ V YNTLI+G+   G  E+A   L+ +M+     P+  ++ I+I+
Sbjct: 325 ----RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMID 380

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G C  G++  A     EMV KG +P +++   +I G+C+ G   +A + ++ M ++G+  
Sbjct: 381 GLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSL 440

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +++ YN LI    ++  +  A  +  +M ++G  PD+ T+N ++ G C+  +M ++  + 
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLY 500

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             M+ +G+  +  TY TLI+  +    +++A +   EM  RG
Sbjct: 501 RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG 542



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 1/209 (0%)

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            Y  LID    VGE +  +KL   M           + +++  Y   G   +A RL  +M
Sbjct: 96  VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDM 155

Query: 337 VG-KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
            G    +PT  S N +++          A      M+S G+ P   ++  ++  F     
Sbjct: 156 WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNE 215

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +D A +L+  M   G VP+ I Y +++       R++++  +L  M   G  PD  T+  
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +I+G      + EA + HD ML R F  D
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  283 bits (725), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 153/448 (34%), Positives = 248/448 (55%), Gaps = 3/448 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K  ++ +F   +E +G +   + ++ L+NAY   G+  +A Q    +    L+    +  
Sbjct: 135 KNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCG 194

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            L + L K      A    +E+L  G  PD   +N L+   C++  ++EA+ +F E+ +R
Sbjct: 195 YLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKR 254

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G+ P +VSF+TLI  + ++G LD+     R M    + PD   Y+++ING C+ G + +A
Sbjct: 255 GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDA 314

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            K+  EM ++G V + VT+ T++NG C         +++ +ML +GV PD  T+ TLI+G
Sbjct: 315 NKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLING 374

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK G++ +A  L   MTQ+ +KPD  TY  LIDG CK G++E A ++  +M+   I  +
Sbjct: 375 LCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            +++  LI+G+C  G V EA R   EM+  GIKP   +   +I G+C+ GD     + L 
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M  +G  P  ++YN L+NG  ++  M  A  L+  M N G+VPD ITYN++L G C+ G
Sbjct: 495 EMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG 554

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLI 457
              D + +     EKGL  D  +YT+LI
Sbjct: 555 NREDFDKL---QSEKGLVQDYGSYTSLI 579



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/335 (38%), Positives = 200/335 (59%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+HKI+ A++   E+ ++G+ P  V++NTLIN YC+ G L++ F+L   M    
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY+ LINGLCK+G+ D A ++  EM   GL P+  T+ TL+   C         
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI+ +M R+GV PD+++++TLI    + G L  A     EM   GL PD   YT++I+G 
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  AL++R EM+++G  +D V +  +++G CR   + EA+    EMLE G+ PD 
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +IHG CK G++     L   M      P +VTYN L++G CK G+M+ AN L   
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           M++  + P+ I+Y IL+ G+C  G+  +  +L  E
Sbjct: 531 MLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE 565



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 199/366 (54%), Gaps = 38/366 (10%)

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI-- 211
           A  ++ E+   G  PD   + ++++  C+   + EA  +  E+ ++G    VV++NT+  
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268

Query: 212 ---------------------------------LNGLCRAKMLTEADDLFNEMLERGVFP 238
                                            +NGLC+   L +A+ LF EM +RG+ P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TFTTLI+GHC  G  +  + ++  M +K +KPD++TYNTLI+G CKVG++ +A KL 
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R + P+  +Y +LI+G C  G +  A  +  EMV +GI+   V+   +I G+CR 
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE 448

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A+  L +M+  G+ PD  +Y  +I+GF ++ ++   F L+ +M+  G VP V+TY
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTY 508

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           NV+L G C+QG+M ++ ++L  M+  G+ PD  TY  L+ GH    N ++  +   E   
Sbjct: 509 NVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE--- 565

Query: 479 RGFVPD 484
           +G V D
Sbjct: 566 KGLVQD 571



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 208/387 (53%), Gaps = 3/387 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + + L K +    A  F  E+   G  PD   +N L++  C+E  + EA  L   +  +G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V ++N+LING CK G  D+   +   M++  + PD  TY+ L+   C++  + +A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  RG+ P+ V+F+TLI      G+ D  +  +++M   G+ PD + Y  +ING 
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA K+  EM ++G   D  TY  +++G C+   L  A ++  EM++ G+  D 
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             FT LI G C++G + +A      M +  IKPD  TY  +I GFCK G+++   KL  +
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P  ++Y +L+NG C  G +  A  L   M+  G+ P  ++ N +++G+C+ G+
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGN 555

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLI 387
               D+  S+   +G+  D  SY +LI
Sbjct: 556 REDFDKLQSE---KGLVQDYGSYTSLI 579



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 198/348 (56%)

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           S L  + SR G+   + ++   +++ G    N+++++++N Y  +G+  +A++    + +
Sbjct: 124 SLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
               +   +   + + L +  + + A   + E+L+ G  PD   F  L+H  CK+  +N+
Sbjct: 184 HNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINE 243

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  LF  + ++ ++P +V++NTLI+G+CK G +++  +L   M+  ++ P+  +Y +LIN
Sbjct: 244 AQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLIN 303

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G C  G + +A +L+ EM  +G+ P  V+  T+I G+C +G A    E   +M+ +GV P
Sbjct: 304 GLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKP 363

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D I+YNTLING  +  ++ +A  LV +M  +GL PD  TY +++ G C++G +  +  I 
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             M+++G+  D   +T LI+G   +  + EA R   EML+ G  PDDA
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA 471



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 158/336 (47%), Gaps = 52/336 (15%)

Query: 203 MDVVTYNTILNGLCRAKMLTEADDL----------------FNEMLE-RGVFPDFYTFTT 245
           + + +Y T+ + LC  KML+EA  L                F  +LE RG       F+ 
Sbjct: 101 LSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSV 160

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIK--------------------------------- 272
           L++ +   G  + A+  F ++ + +++                                 
Sbjct: 161 LMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCG 220

Query: 273 --PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
             PD+  +N L+   CK  ++ +A  L+ ++  R + P  +S+  LINGYC  G++ + F
Sbjct: 221 YPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF 280

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           RL   M+   + P + + + +I G C+ G    A++   +M   G+ P+ +++ TLING 
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
                 D    +  +M  +G+ PDVITYN ++ G C+ G + +++ ++  M ++GL PD+
Sbjct: 341 CVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            TYT LI+G   + +L+ A     EM++ G   D+ 
Sbjct: 401 FTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  283 bits (725), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 251/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   ++  A     E  + G+ P  VTY  LI     EG  E+A++L   M   G
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHG 347

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    +N +I GL        A  +  EM   G+ PD  TYN L+   C++  + EA 
Sbjct: 348 LLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREAL 406

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +M+  GV P IV++ +L+  +  NG +D A+  + EM   G  P+ V YT ++ G+
Sbjct: 407 NLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                  +A  +  EM + G   +  TYNT++NGLC    + E  ++       G  P  
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA 526

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I+G  K G M  A  ++  M  K I P+IVTY + IDG+CK    + A K+  D
Sbjct: 527 MTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLND 586

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + P+  +Y  LI G+C  G+++ A ++   M+  G+ P +   N+ I GY     
Sbjct: 587 VRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKM 646

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     KM+ EG+D D+ +Y TLI+GF ++ N+  A  L S+M  +G +PD IT+  
Sbjct: 647 MEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTA 706

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  G CR G + D+  +L  M    + P+   Y  LING++    L+EAFR HDEML+R 
Sbjct: 707 LTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERK 766

Query: 481 FVPDD 485
            +PDD
Sbjct: 767 IMPDD 771



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 246/453 (54%), Gaps = 2/453 (0%)

Query: 6   CKDHKIDSAKMFLC-EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           C +  +      LC +M   G+ P T  +N +I     +   ++A  L   M+  G+ P 
Sbjct: 327 CTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PD 385

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
            FTYN LI+ LC++ +   A  + ++M + G+ P   TY++LL+  C    M EA +++ 
Sbjct: 386 AFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYT 445

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM  +G  P++V+++TL+         D+A     EMK  G+  ++  Y  +ING C  G
Sbjct: 446 EMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVG 505

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V E  +M      +G V   +TYN+I+NG  +A M+  A  ++ +M  +G+ P+  T+T
Sbjct: 506 RVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYT 565

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           + I G+CK    + AL + + +  K ++PDI  YN+LI GFC+ G M  A ++   M+  
Sbjct: 566 SFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKD 625

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN   Y   I GY ++  + EA RL+ +M+ +GI     +  T+I G+ + G+ + A
Sbjct: 626 GLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFA 685

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            +  S+MV++G  PD I++  L +G  R  ++D A  L+ +M    + P+V+ YN+++ G
Sbjct: 686 LKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLING 745

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           + R G++ ++  +   M+E+ + PD +TY  L+
Sbjct: 746 YLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 258/519 (49%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K+   D A     EM    + PD    +  I + C+      A  ++  M   G
Sbjct: 183 VMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAG 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FT+NS+++ L K GR + A  + DE+L  G         TL+   C +  + +A 
Sbjct: 243 FVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKAL 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF E  R G+ P  V+++ LI   +  G  ++A    R+M+  GL+P    + ++I G 
Sbjct: 303 DIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +    +A+ +  EM + G + D  TYN +++ LC+ + + EA +L+ +M E GV P  
Sbjct: 363 LNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+  +C +G M++A+ L+  M  K   P++VTY TL+ G       +KA  L A+
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 301 MISRKISPNYISYGILINGYCSMGHVTE-------------------------------- 328
           M    +S N  +Y  LING C +G V E                                
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 329 ---AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              AF ++ +M  KGI P +V+  + I GYC++     A + L+ +  +G+ PD  +YN+
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI GF +E NM  A  ++  M   GL+P++  YN  +TG+     M ++  +  +MI++G
Sbjct: 602 LIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEG 661

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++ D +TYTTLI+G     N+  A + + EM+ +G +PD
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 211/387 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  KI  A     +M + GV P  VTY++L+  YC  G ++EA +L   M GKG
Sbjct: 392 LIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKG 451

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY +L+ G   K   D+A  +L EM Q G+S +  TYNTL+   C    + E  
Sbjct: 452 FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVG 511

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+       G  P  ++++++I  F + G +  A   +++M + G+ P+ V YT  I+GY
Sbjct: 512 EMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGY 571

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+      ALKM +++  KG   D+  YN+++ G C+   ++ A  +   ML+ G+ P+ 
Sbjct: 572 CKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNI 631

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + + I G+     M +AL L++ M ++ I  D  TY TLIDGF K G +  A KL+++
Sbjct: 632 SVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSE 691

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+++   P++I++  L +G C  G + +A +L  EM    I+P ++  N +I GY R+G 
Sbjct: 692 MVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGK 751

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLI 387
             +A     +M+   + PD  +Y+ L+
Sbjct: 752 LQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 245/499 (49%), Gaps = 36/499 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           ME +GV PD  +   L+    R     +A  L+  M GKG     + ++ ++    K+G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A  + DEM    + PD    +  +   C+  + + A  +  +M   G  P   +F++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++ +  + G+++ AL    E+ + G     VL T +++GYC    V +AL + +E L  G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 201 CVMDVVTYNTILNG------------LCRA-----------------------KMLTEAD 225
            V   VTY  ++ G            LCR                        K+  +A 
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            LF EM + G+ PD +T+  LIH  C+   + +ALNL++ M +  +KP IVTY++L+  +
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  G M++A KL+ +M  +  +PN ++Y  L+ G+ +     +A+ L  EM   G+    
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCND 491

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            + NT+I G C  G   +  E L +  +EG  P +++YN++INGF++   M  AFA+  +
Sbjct: 492 YTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQ 551

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  +G+ P+++TY   + G+C+      +  +L  +  KGL PD + Y +LI G   + N
Sbjct: 552 MCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGN 611

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +  A +    ML+ G +P+
Sbjct: 612 MSHALQVLVLMLKDGLLPN 630



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 220/437 (50%), Gaps = 15/437 (3%)

Query: 55  SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
           SM  +G+ P   +   L+    +      A  +L EM   G   D   ++ ++  +C KE
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVM-RACFKE 190

Query: 115 NM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
            M  +A  +F EM    + PD    S  I    +    +RAL+  R+M+ AG VP +  +
Sbjct: 191 GMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTF 250

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +++   + G + EAL ++DE+L  G  M VV   T+++G C  + + +A D+F E L 
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR 310

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+ P   T+T LI G  ++G   KA  L   M    + P    +N +I G         
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLN------ 364

Query: 294 ANKLWADMIS--RKIS----PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            +KLW D +S  ++++    P+  +Y ILI+  C    + EA  LW +M   G+KP +V+
Sbjct: 365 -DKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            ++++  YC +G   +A +  ++M  +G  P+ ++Y TL+ G + +   DKA+AL+++M+
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             G+  +  TYN ++ G C  GR+ +   +L R   +G  P   TY ++ING +    + 
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 468 EAFRFHDEMLQRGFVPD 484
            AF  + +M  +G  P+
Sbjct: 544 SAFAVYQQMCAKGIPPN 560



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 73/127 (57%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M ++G+  DT TY TLI+ + ++G +  A +L + M  KG  P   T+ +L +GLC+ G
Sbjct: 656 KMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNG 715

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D A+++LDEM ++ + P+   YN L+    R   + EA  +  EM  R + PD  ++ 
Sbjct: 716 DIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYD 775

Query: 140 TLIGIFS 146
            L+G+ S
Sbjct: 776 ILVGMKS 782


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 148/471 (31%), Positives = 250/471 (53%), Gaps = 15/471 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS----- 55
           ++   C   ++D A+  L  M  +   PD V+Y T+++  C+ G +EEA +L        
Sbjct: 218 LLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPS 277

Query: 56  -MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
             S     P +  YN +I GLC+  R D A ++ ++M +  +SPD+ +Y  L+    +  
Sbjct: 278 SSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAG 337

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            +++A  +F ++   GV P  V++++LI         D A   F +M   G  P  V Y 
Sbjct: 338 KLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN 397

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+  C+ G + EA  +  +M+E G V DVVTYNT+++GLC++  + EA  LFNEM   
Sbjct: 398 VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 457

Query: 235 GVFPDFYTFTTLIHG---------HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           G  P+  +  T+I G          C+ G +++A  L   MT     PD+VTY+TLI G 
Sbjct: 458 GCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 517

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C +  ++ A  L  DM+ R+  P  ++   LI+G C  G + EA  +   MV  G  P +
Sbjct: 518 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 577

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ NT++ G+CR+G   +A E LS MV+ G+ P+ ++Y  L++G  +   + +A  + ++
Sbjct: 578 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 637

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           M++ G  P++ TY  ++ GFC  G++     +   M+  G++PD   Y TL
Sbjct: 638 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 688



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 258/499 (51%), Gaps = 30/499 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  K++ A+    ++   GV P TV Y +LI+  C     ++A +L   M+ +G
Sbjct: 329 LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 388

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN +I+  CK+G  + A +++ +M++ G  PD  TYNT++   C+   + EA 
Sbjct: 389 CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 448

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRN--------GQLDRALMYFREMKSAGLVPDNV 171
            +F EM R G  P+  S +T+I G+  ++        G+LD A    + M   G VPD V
Sbjct: 449 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVV 508

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            Y+ +I+G C    V +A  + ++M+++ C   VVT NT+++GLC+A  + EA ++ + M
Sbjct: 509 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 568

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           +  G  PD  T+ TL+HGHC+ G   +A  L   M  + + P++VTY  L+ G CK   +
Sbjct: 569 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 628

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
            +A  ++A M S   +PN  +Y  LI G+CS G V    +L+ EMV  GI P  V   T+
Sbjct: 629 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 688

Query: 352 IKGYCRSGDASKADEFLSK----MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
               C+SG +++A E L +    + SE    +   Y   ++G +    M+ A   V  M 
Sbjct: 689 AAELCKSGRSARALEILREGRESLRSEAWGDE--VYRFAVDGLLEAGKMEMALGFVRDMV 746

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             G +P       ++ G C+ G+  ++  +L  +++            L  G  ++    
Sbjct: 747 RGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD------------LAYGGKARG--- 791

Query: 468 EAFRFHDEMLQRGFVPDDA 486
           +A +F +EM+ +G+  +DA
Sbjct: 792 KAAKFVEEMVGKGYEIEDA 810



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 259/531 (48%), Gaps = 51/531 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++L K  + ++ K  +  M  +G +PD+ T+ T++   C+ G ++EA  +M+ M  + 
Sbjct: 50  LIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRM 109

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T + L + LC +G  +RA ++L+ M       +++ YN ++V  C+   + +A 
Sbjct: 110 IPPYFATSSFLAHELCLRGSMERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDAL 165

Query: 121 EIFCEMSRRGVA--------------------------------PDIVSFSTLIGIFSRN 148
           E+   MS + +                                 P +V+ + L+  F   
Sbjct: 166 ELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSR 225

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM-RDEMLEKGCVMDVVT 207
           GQ+D+A    R M      PD V Y  +++G C+ G V EA+++  D  L          
Sbjct: 226 GQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSP 285

Query: 208 -----YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
                YN ++ GLC+   + EA  +F +M ER V PD +++  LI G  K G +N A NL
Sbjct: 286 PSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNL 345

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  +    + P  V Y +LI G C     + A +L+ADM  R   P+ ++Y ++I+  C 
Sbjct: 346 FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK 405

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G + EA  L  +M+  G  P +V+ NT++ G C+S    +A    ++M   G  P+  S
Sbjct: 406 RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRS 465

Query: 383 YNTLINGFVREE---------NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
           +NT+I G  ++           +D+AF L+ +M + G VPDV+TY+ +++G C   R+ D
Sbjct: 466 HNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 525

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  +L  M+++   P   T  TLI+G      +KEA    D M+  G  PD
Sbjct: 526 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 576



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 236/514 (45%), Gaps = 58/514 (11%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M Q+G++P  + + ++I  +C  G   EA ++ + M  +   P    YN LI+ L K+  
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLME-ECHSPYPDVYNVLIDSLSKRQE 59

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            +  K+++  M+  G  PD+ T+ T+L   C+   M EAE +  EM  R + P   + S 
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L       G ++RA      M     V ++  Y I++   C+   V +AL++   M EK 
Sbjct: 120 LAHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAARVDDALELARTMSEKR 175

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
             +   + +++L GL  +  + EA  ++ E       P   T   L+ G C  G ++KA 
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKAR 232

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD-------------------- 300
            L   M  +   PD V+Y T++DG CK G +E+A +L+ D                    
Sbjct: 233 ELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYN 292

Query: 301 ---------------------MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
                                M  R +SP+  SYGILI+G    G + +A  L+ +++  
Sbjct: 293 IVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS 352

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           G+ P+ V+  ++I G C +     A E  + M   G  P  ++YN +I+   +   +++A
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 412

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             L+ KM   G VPDV+TYN ++ G C+  R+ ++ L+   M   G  P+R ++ T+I G
Sbjct: 413 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472

Query: 460 HVSQN---------NLKEAFRFHDEMLQRGFVPD 484
              Q+          L EAFR    M   G VPD
Sbjct: 473 LCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPD 506


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 165/519 (31%), Positives = 265/519 (51%), Gaps = 35/519 (6%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ---------- 51
           +NA CK  K++ A     +ME+ GV P+ VTYNT+I+     G  +EAF           
Sbjct: 259 INAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGV 318

Query: 52  -------------------------LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE 86
                                    ++  M+ KG  P V  YN+LI+ L + G  ++A E
Sbjct: 319 EPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIE 378

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           + D M+  GLS  ++TYNTL+   C+      AE +  EM   G   +  SF+++I +  
Sbjct: 379 IKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLC 438

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
            +   D AL +  EM    + P   L T +I+G C++G   +A+++  + L KG ++D  
Sbjct: 439 SHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTK 498

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T N +L+GLC A  L E   +  E+L RG   D  ++ TLI G C +  +++A    D M
Sbjct: 499 TSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEM 558

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            +K +KPD  TY+ LI G   + ++E+A + W D     + P+  +Y ++I+G C     
Sbjct: 559 VKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERT 618

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            E  +L+ EM+   ++P  V  N +I  YCRSG  S A E    M  +G+ P+S +Y +L
Sbjct: 619 EEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSL 678

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G      +++A  L+ +M  +GL P+V  Y  ++ G+ + G+M   E +L  M  K +
Sbjct: 679 IKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 738

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +P++ TYT +I G+    N+ EA R   EM ++G VPD 
Sbjct: 739 HPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDS 777



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/475 (32%), Positives = 255/475 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  L K  +I  A   L EM +KG  P+ + YN LI++    G L +A ++ + M  KG
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKG 387

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L     TYN+LI G CK G+ D A+ +L EML +G + +  ++ +++   C       A 
Sbjct: 388 LSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSAL 447

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM  R ++P     +TLI    ++G+  +A+  + +  + G + D      +++G 
Sbjct: 448 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGL 507

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + E  +++ E+L +G VMD V+YNT+++G C  K L EA    +EM+++G+ PD 
Sbjct: 508 CEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDN 567

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT++ LI G      + +A+  +    +  + PD+ TY+ +IDG CK    E+  KL+ +
Sbjct: 568 YTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDE 627

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + PN + Y  LI  YC  G ++ A  L  +M  KGI P   +  ++IKG      
Sbjct: 628 MMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 687

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L +M  EG++P+   Y  LI+G+ +   M K   L+ +M ++ + P+ ITY V
Sbjct: 688 VEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 747

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           ++ G+ R G + ++  +L  M EKG+ PD  TY   I G++ Q  + +AF+  DE
Sbjct: 748 MIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 241/461 (52%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           KGV PD   + T INA+C+ G +EEA +L + M   G+ P V TYN++I+GL   GR D 
Sbjct: 246 KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDE 305

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A    ++M++ G+ P   TY+ L+    + + + +A  +  EM+ +G  P+++ ++ LI 
Sbjct: 306 AFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLID 365

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
                G L++A+     M S GL   +  Y  +I GYC++G    A ++  EML  G  +
Sbjct: 366 SLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNV 425

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +  ++ +++  LC   M   A     EML R + P     TTLI G CK G  +KA+ L+
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                K    D  T N L+ G C+ G++E+  ++  +++ R    + +SY  LI+G C  
Sbjct: 486 LKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             + EAF    EMV KG+KP   + + +I+G        +A +F       G+ PD  +Y
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTY 605

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + +I+G  + E  ++   L  +M +  L P+ + YN ++  +CR GR+  +  +   M  
Sbjct: 606 SVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKH 665

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           KG++P+ +TYT+LI G    + ++EA    +EM   G  P+
Sbjct: 666 KGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPN 706



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 235/469 (50%), Gaps = 7/469 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLE---EAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           +  KG++P   T N L+ +  R    +   EAF ++     KG+ P V+ + + IN  CK
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVV----CKGVSPDVYLFTTAINAFCK 264

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
            G+ + A E+  +M + G+ P+  TYNT++          EA     +M  RGV P +++
Sbjct: 265 GGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLIT 324

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           +S L+   ++  ++  A    +EM   G  P+ ++Y  +I+     G + +A++++D M+
Sbjct: 325 YSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMV 384

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
            KG  +   TYNT++ G C++     A+ L  EML  G   +  +FT++I   C     +
Sbjct: 385 SKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFD 444

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            AL     M  +++ P      TLI G CK G+  KA +LW   +++    +  +   L+
Sbjct: 445 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALL 504

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G C  G + E FR+  E++G+G     VS NT+I G C +    +A  F+ +MV +G+ 
Sbjct: 505 HGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLK 564

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD+ +Y+ LI G +    +++A       +  G++PDV TY+V++ G C+  R  + + +
Sbjct: 565 PDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKL 624

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              M+   L P+   Y  LI  +     L  A    ++M  +G  P+ A
Sbjct: 625 FDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSA 673


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 265/486 (54%), Gaps = 3/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL    ++  A     EM      PD VTY T+++ YC  G LE A +L++ M+ KG
Sbjct: 261 LLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKG 317

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+     Y S+I  LC KG+   A  VL++M   G++ D   + T++   C K +++ A 
Sbjct: 318 LESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAAR 377

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM +RG+A D V+ + LI    R G+L  A    +EM   GL  D V YT++I+GY
Sbjct: 378 RLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGY 437

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA ++ +EM+ +    +VVTY  + +GLC+   +  A++L +EM  +G+  + 
Sbjct: 438 CKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNV 497

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+ +LI+G CK GN+ +A+ +   M     + D+ TY TLID  CK GE ++A+ +  +
Sbjct: 498 YTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQE 557

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + I P+  +Y +L+NG+C  G V    +L   M+ K ++P +V+ N+++K YC   +
Sbjct: 558 MLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKN 617

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    M S+ V P+  +YN LI G  +  NM +A     +M  +GL     +Y+ 
Sbjct: 618 MKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSA 677

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    ++ +  ++ +   +M  +GL  +   Y+  ++   +++NL+      DE+++  
Sbjct: 678 LIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEAS 737

Query: 481 FVPDDA 486
            V   A
Sbjct: 738 HVKSKA 743



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 219/418 (52%), Gaps = 39/418 (9%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
             S D A+++ LL+  C       + E+   + + G++P   S + ++        LD A
Sbjct: 195 AFSSDPASFDLLLL--CLP-----SAELLRRLRQYGLSPSPESCNAVLSRLP----LDEA 243

Query: 155 LMYFREMK---------------SAGLV-------------PDNVLYTIIINGYCRNGFV 186
           +  FRE+                SAG +             PD V Y  +++GYC  G +
Sbjct: 244 IALFRELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGEL 303

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             A+K+ DEM  KG   +   Y +++  LC    +++A  +  +M   GV  D   FTT+
Sbjct: 304 ENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTV 363

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I G C  G++  A  LF+ M ++ +  D VT+  LI+G C+ GE+++A+++  +M+ + +
Sbjct: 364 ISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGL 423

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
             + ++Y +LI+GYC  G++ EAFR+  EMVG+ + P +V+   +  G C+ GD   A+E
Sbjct: 424 DVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANE 483

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            L +M ++G++ +  +YN+LING  +  N+++A  ++++ME  G   DV TY  ++   C
Sbjct: 484 LLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLC 543

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G    +  +L  M++KG+ P  +TY  L+NG      ++   +  + ML++   P+
Sbjct: 544 KSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPN 601


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 148/457 (32%), Positives = 249/457 (54%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +N ++ +  +      A  L   M  KG++    T N LIN  C  G+   +  V
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  PDT T NTL+   C K  + ++     ++  +G   D VS+ TL+    +
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+   A+   R ++     P+ V+Y  II+G C++  V EA  +  EM  +G   D +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T++ G C    L  A  L +EM+ + + P  Y +  LI+  CK+GN+ +A NL  +MT
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ IKP +VTY+TL+DG+C VGE++ A +++  M+   ++PN  SY I+ING C    V 
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L  EM+ K + P  V+ N++I G C+SG  + A   +++M   G   D ++Y +L+
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   + +N+DKA AL  KM+ +G+ P + TY  ++ G C+ GR+ +++ +   ++ KG  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D  TYT +I+G   +    EA     +M   G +P+
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 464



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 244/446 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   ++  +   L ++ + G  PDT+T NTL+   C +G ++++    + +  +G
Sbjct: 51  LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQG 110

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +L+NGLCK G    A ++L  +      P+   YNT++   C+ + ++EA 
Sbjct: 111 FQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAY 170

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM  RG+ PD ++++TLI  F   GQL  A     EM    + P   +Y I+IN  
Sbjct: 171 DLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINAL 230

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  +   M ++G    VVTY+T+++G C    +  A  +F+ M++ GV P+ 
Sbjct: 231 CKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNV 290

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y++  +I+G CK   +++A+NL   M  K++ PD VTYN+LIDG CK G +  A  L  +
Sbjct: 291 YSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE 350

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R    + ++Y  L++  C   ++ +A  L+ +M  +GI+PT+ +   +I G C+ G 
Sbjct: 351 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 410

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E    ++ +G   D  +Y  +I+G  +E   D+A A+ SKME+ G +P+ +T+ +
Sbjct: 411 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEI 470

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           I+     +     +E +L  MI KGL
Sbjct: 471 IIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 240/466 (51%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME KG+  + VT N LIN +C  G +  +F ++  +   G +P   T N+L+ GLC KG
Sbjct: 35  QMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKG 94

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              ++    D+++  G   D  +Y TLL   C+      A ++   +  R   P++V ++
Sbjct: 95  EVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYN 154

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++  ++ A   + EM + G+ PD + YT +I G+C  G ++ A  + DEM+ K
Sbjct: 155 TIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILK 214

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
                V  YN ++N LC+   + EA +L   M + G+ P   T++TL+ G+C  G +  A
Sbjct: 215 NINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNA 274

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +F  M Q  + P++ +YN +I+G CK   +++A  L  +M+ + + P+ ++Y  LI+G
Sbjct: 275 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 334

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G +T A  L  EM  +G    +V+  +++   C++ +  KA     KM   G+ P 
Sbjct: 335 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 394

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +Y  LI+G  +   +  A  L   +  +G   DV TY V+++G C++G   ++  I  
Sbjct: 395 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 454

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +M + G  P+  T+  +I     ++   +A +   EM+ +G +  D
Sbjct: 455 KMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLD 500



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 225/447 (50%), Gaps = 6/447 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  +  F  ++  +G   D V+Y TL+N  C+ G    A +L+  +  + 
Sbjct: 86  LMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRS 145

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN++I+GLCK    + A ++  EM   G+ PD  TY TL+   C    +  A 
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAF 205

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  + + P +  ++ LI    + G +  A      M   G+ P  V Y+ +++GY
Sbjct: 206 SLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY 265

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V  A ++   M++ G   +V +YN ++NGLC+ K + EA +L  EML + + PD 
Sbjct: 266 CLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 325

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G CK G +  ALNL + M  +    D+VTY +L+D  CK   ++KA  L+  
Sbjct: 326 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P   +Y  LI+G C  G +  A  L+  ++ KG    + +   +I G C+ G 
Sbjct: 386 MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGM 445

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG-LVPDVITYN 419
             +A    SKM   G  P+++++  +I     ++  DKA  L+ +M  +G LV D    +
Sbjct: 446 FDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKVAD 505

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGL 446
           V +     Q     +E +L  MI KGL
Sbjct: 506 VFV-----QNENDKAEKLLHEMIAKGL 527



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 2/185 (1%)

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+  + +P  I +  ++     M     A  L  +M  KGI+   V+ N +I  +C  G 
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + +   L K++  G  PD+I+ NTL+ G   +  + K+     K+  QG   D ++Y  
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 421 ILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +L G C+ G      + L RMIE +   P+   Y T+I+G      + EA+  + EM  R
Sbjct: 121 LLNGLCKIGETR-CAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179

Query: 480 GFVPD 484
           G  PD
Sbjct: 180 GIFPD 184


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 148/418 (35%), Positives = 247/418 (59%), Gaps = 6/418 (1%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           AF L   M    L     T+N ++  LC  G+  RA E+L +M +    P+  TYNT++ 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 109 ESCRKENMSEAEEIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
             C +  +  A +I  EM  RG +AP+  ++ T+I  + + G++D A+  F EM + G V
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 168 -PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            P+ V+Y  +I GYC  G +  AL  RD M+E+G  M V TYN +++ L      TEA +
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L  EM  +G+ PD +T+  LI+GHCK+GN+ KAL +F+ M+++ ++  +VTY  LI    
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G++++ +KL+ + + R I P+ + Y  LIN + + G++  AF +  EM  K I P  V
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 767

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + NT+++G C  G   +A + + +M   G+ PD ++YNTLI+G+  + ++  A  + ++M
Sbjct: 768 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 827

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            N+G  P ++TYN ++ G C+ G+  D+E ++  M+E G+ PD STY +LI G  +++
Sbjct: 828 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 885



 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 142/396 (35%), Positives = 218/396 (55%), Gaps = 6/396 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           M+  LC   K   A   L +M +    P+ VTYNT+I  +C  G ++ A  +M  M  + 
Sbjct: 494 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 549

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSE 118
           G+ P  +TY ++I+G CK GR D A +V DEML  G + P+   YN L+   C +  +  
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A      M  RGVA  + +++ L+     +G+   A     EM   GL PD   Y I+IN
Sbjct: 610 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 669

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+ G V +AL++ + M  +G    VVTY  ++  L +   + E D LF+E + RG+ P
Sbjct: 670 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 729

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +  LI+ H   GN+++A  +   M +K I PD VTYNTL+ G C +G +++A KL 
Sbjct: 730 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R I P+ ++Y  LI+GY   G V +A R+  EM+ KG  PTL++ N +I+G C++
Sbjct: 790 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 849

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           G    A+  + +MV  G+ PD  +Y +LI G   E+
Sbjct: 850 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 885



 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 215/399 (53%), Gaps = 6/399 (1%)

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +M ++ L   T T+N +L   C     + A E+  +M R    P+ V+++T+I  F   G
Sbjct: 478 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG 533

Query: 150 QLDRALMYFREMKS-AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVT 207
           ++  AL   REM+   G+ P+   Y  +I+G+C+ G V EA+K+ DEML KG V  + V 
Sbjct: 534 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 593

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ G C    L  A    + M+ERGV     T+  L+H    DG   +A  L + M 
Sbjct: 594 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 653

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K + PD+ TYN LI+G CK G ++KA +++ +M  R +    ++Y  LI      G V 
Sbjct: 654 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 713

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           E  +L+ E V +GI+P LV  N +I  +  SG+  +A E + +M  + + PD ++YNTL+
Sbjct: 714 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 773

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G      +D+A  L+ +M  +G+ PD++TYN +++G+  +G + D+  I   M+ KG N
Sbjct: 774 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 833

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P   TY  LI G        +A     EM++ G  PDD+
Sbjct: 834 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 872


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 154/503 (30%), Positives = 267/503 (53%), Gaps = 18/503 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ ALCK  K+D+    L E+ + G+ P  VTYN L++A C+ G +EEAF+L   M   G
Sbjct: 17  MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 76

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+  LINGL +  R      VL EM Q+G+SP+   YN L+   CRK + S+A 
Sbjct: 77  MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQAL 136

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  + + P  V+++ +     + G+++RA     +M S G+     L+  ++   
Sbjct: 137 RLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWL 196

Query: 181 CRNGFVLEAL-KMRDEMLEKGCVMDVVTYNTILNGLCRA-----------------KMLT 222
            +    LE++  + +EM+ +G   +       +  LC+                  K + 
Sbjct: 197 LQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMK 256

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           EA  +   ML +G+  D  T+  +I G CKD  M +A+ L   MT++  KPD+ T+NTL+
Sbjct: 257 EATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLL 316

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
             +C +G+ME+   L   M +  + P+ +SYG +I+G+C    + +A     E++ +G+K
Sbjct: 317 HAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLK 376

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P +   N +I GY R+GD S A + +  M S G+ P +++Y +L+        +++A  +
Sbjct: 377 PNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTI 436

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
            S+     +   VI Y +++ G+C+ G+M ++      M  +G++P++ TYTTL+  +  
Sbjct: 437 FSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSK 496

Query: 463 QNNLKEAFRFHDEMLQRGFVPDD 485
             N +EA +  DEM+  G +PD+
Sbjct: 497 SGNSEEASKLFDEMVGSGVIPDN 519



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 228/447 (51%), Gaps = 18/447 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  +     + L EMEQ GV P+ V YN LI  +CR+G   +A +L + M  K 
Sbjct: 87  LINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKK 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC-RKENMSEA 119
           +KP   TYN +   LCK+G  +RA+ +L++ML +G++     +NT++     R   +   
Sbjct: 147 MKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESV 206

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFRE------MKSA-------- 164
             I  EM  RG+ P+    +  +    + G+   A+ ++F+       MK A        
Sbjct: 207 VSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTML 266

Query: 165 --GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
             G+  D++ Y I+I G C++  + EA+K+  +M  +G   D+ T+NT+L+  C    + 
Sbjct: 267 NKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKME 326

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           E   L ++M   G+ PD  ++ T+I GHCK  ++ KA      +  + +KP++  YN LI
Sbjct: 327 ETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALI 386

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            G+ + G++  A      M S  I P  ++YG L+   C  G V EA  ++ +     + 
Sbjct: 387 GGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVD 446

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
             ++    +I+GYC+ G   +A  +  +M S G+ P+ ++Y TL+  + +  N ++A  L
Sbjct: 447 LGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKL 506

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQG 429
             +M   G++PD ITY  ++     +G
Sbjct: 507 FDEMVGSGVIPDNITYGTLIARCSEKG 533



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 195/374 (52%), Gaps = 18/374 (4%)

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           R VA +  S++ +I    + G++D       E+  AGL P  V Y ++++  C++G V E
Sbjct: 5   RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 64

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A +++  M + G    VVT+  ++NGL R +   E   +  EM + GV P+   +  LI 
Sbjct: 65  AFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG 124

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
            HC+ G+ ++AL LFD M  K +KP  VTYN +    CK GEME+A ++  DM+S  ++ 
Sbjct: 125 WHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTV 184

Query: 309 NYISYGILINGYCSMGHVTEA-FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS----- 362
           +   +  ++          E+   +  EMV +G++P        ++  C+ G        
Sbjct: 185 HCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGI 244

Query: 363 ------------KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
                       +A + +  M+++G++ DSI+YN +I G  ++  M++A  L   M  +G
Sbjct: 245 WFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 304

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
             PD+ T+N +L  +C  G+M ++  +L +M  +GL PD  +Y T+I+GH    ++++A 
Sbjct: 305 FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAK 364

Query: 471 RFHDEMLQRGFVPD 484
            +  E++ RG  P+
Sbjct: 365 EYLTELMDRGLKPN 378



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%)

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
           S  V  +  SY  +I    +   +D  F +++++   GL P V+TYNV++   C+ GR+ 
Sbjct: 4   SRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVE 63

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           ++  +  RM + G+ P   T+  LING        E      EM Q G  P++  
Sbjct: 64  EAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVI 118


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 150/455 (32%), Positives = 242/455 (53%), Gaps = 8/455 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD  T   LI      G   EA +++ +       P V  YN+++ G C  G+ D A+ +
Sbjct: 94  PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMVAGYCGAGQLDAARRL 148

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           + EM    + PD  TYNTL+   C +   + A  +  EM RR   PD+V+++ L+    +
Sbjct: 149 VAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 205

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
                +A+    EM+  G  PD V Y +++NG C+ G V +A++    +   GC  + V+
Sbjct: 206 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 265

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN +L GLC A+   +A++L  EM ++G  P+  TF  LI   C+ G +  AL + + + 
Sbjct: 266 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 325

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +    P+ ++YN L+  FCK  +M+KA      M+SR   P+ +SY  L+   C  G V 
Sbjct: 326 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 385

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  L +++  KG  P L+S NT+I G  ++G   +A E L++MVS+G+ PD I+Y+T+ 
Sbjct: 386 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 445

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  RE+ ++ A     K+++ G+ P+ + YN I+ G C++   H +  +   MI  G  
Sbjct: 446 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 505

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           P+ STYT LI G   +  +KEA    DE+  RG V
Sbjct: 506 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 203/376 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +  +A   L EM ++   PD VTY  L+ A C+    ++A +L++ M  KG
Sbjct: 164 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN ++NG+C++GR D A E L  +   G  P+T +YN +L   C  E   +AE
Sbjct: 224 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM ++G  P++V+F+ LI    R G ++ AL    ++   G  P+++ Y  +++ +
Sbjct: 284 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A+   D M+ +GC  D+V+YNT+L  LCR+  +  A +L +++ ++G  P  
Sbjct: 344 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 403

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ T+I G  K G   +AL L + M  K ++PDI+TY+T+  G C+   +E A + +  
Sbjct: 404 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 463

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    I PN + Y  +I G C       A  L+  M+G G  P   +   +I+G    G 
Sbjct: 464 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 523

Query: 361 ASKADEFLSKMVSEGV 376
             +A + L ++ S GV
Sbjct: 524 IKEARDLLDELCSRGV 539



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 116/202 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A CK  K+D A  FL  M  +G YPD V+YNTL+ A CR G ++ A +L++ +  KG
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + +YN++I+GL K G+   A E+L+EM+  GL PD  TY+T+    CR++ + +A 
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F ++   G+ P+ V ++ +I    +  +   A+  F  M   G +P+   YTI+I G 
Sbjct: 459 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518

Query: 181 CRNGFVLEALKMRDEMLEKGCV 202
              G + EA  + DE+  +G V
Sbjct: 519 AYEGLIKEARDLLDELCSRGVV 540



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 96/172 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+  ++D A   L +++ KG  P  ++YNT+I+   + G  +EA +L+N M  KG
Sbjct: 374 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 433

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P + TY+++  GLC++ R + A     ++  MG+ P+T  YN +++  C++     A 
Sbjct: 434 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 493

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           ++F  M   G  P+  +++ LI   +  G +  A     E+ S G+V  +++
Sbjct: 494 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLI 545


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 148/418 (35%), Positives = 247/418 (59%), Gaps = 6/418 (1%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           AF L   M    L     T+N ++  LC  G+  RA E+L +M +    P+  TYNT++ 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 109 ESCRKENMSEAEEIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
             C +  +  A +I  EM  RG +AP+  ++ T+I  + + G++D A+  F EM + G V
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 168 -PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            P+ V+Y  +I GYC  G +  AL  RD M+E+G  M V TYN +++ L      TEA +
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L  EM  +G+ PD +T+  LI+GHCK+GN+ KAL +F+ M+++ ++  +VTY  LI    
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G++++ +KL+ + + R I P+ + Y  LIN + + G++  AF +  EM  K I P  V
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 762

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + NT+++G C  G   +A + + +M   G+ PD ++YNTLI+G+  + ++  A  + ++M
Sbjct: 763 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 822

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            N+G  P ++TYN ++ G C+ G+  D+E ++  M+E G+ PD STY +LI G  +++
Sbjct: 823 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 880



 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 142/396 (35%), Positives = 218/396 (55%), Gaps = 6/396 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           M+  LC   K   A   L +M +    P+ VTYNT+I  +C  G ++ A  +M  M  + 
Sbjct: 489 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 544

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSE 118
           G+ P  +TY ++I+G CK GR D A +V DEML  G + P+   YN L+   C +  +  
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A      M  RGVA  + +++ L+     +G+   A     EM   GL PD   Y I+IN
Sbjct: 605 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 664

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+ G V +AL++ + M  +G    VVTY  ++  L +   + E D LF+E + RG+ P
Sbjct: 665 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 724

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +  LI+ H   GN+++A  +   M +K I PD VTYNTL+ G C +G +++A KL 
Sbjct: 725 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R I P+ ++Y  LI+GY   G V +A R+  EM+ KG  PTL++ N +I+G C++
Sbjct: 785 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 844

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           G    A+  + +MV  G+ PD  +Y +LI G   E+
Sbjct: 845 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 880



 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 215/399 (53%), Gaps = 6/399 (1%)

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +M ++ L   T T+N +L   C     + A E+  +M R    P+ V+++T+I  F   G
Sbjct: 473 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG 528

Query: 150 QLDRALMYFREMKS-AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVT 207
           ++  AL   REM+   G+ P+   Y  +I+G+C+ G V EA+K+ DEML KG V  + V 
Sbjct: 529 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 588

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ G C    L  A    + M+ERGV     T+  L+H    DG   +A  L + M 
Sbjct: 589 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 648

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K + PD+ TYN LI+G CK G ++KA +++ +M  R +    ++Y  LI      G V 
Sbjct: 649 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 708

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           E  +L+ E V +GI+P LV  N +I  +  SG+  +A E + +M  + + PD ++YNTL+
Sbjct: 709 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 768

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G      +D+A  L+ +M  +G+ PD++TYN +++G+  +G + D+  I   M+ KG N
Sbjct: 769 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 828

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P   TY  LI G        +A     EM++ G  PDD+
Sbjct: 829 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 867


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 155/488 (31%), Positives = 263/488 (53%), Gaps = 4/488 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC   + D A  + L  M + GV PDT++Y+T++ + C +   + A  L+++M  K
Sbjct: 160 LLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKK 219

Query: 60  --GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             G  P V +YN++I+G  ++G   +A  +  EM+Q G+ PD  TY++ +   C+   M 
Sbjct: 220 SGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMD 279

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +AE +  +M   G  PD V+++ +I  +S  GQ       FREM   GL+PD       +
Sbjct: 280 KAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYM 339

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  C++G   EA +  D M  KG   D+VTY+ +L+G      + +  +LFN M   G+ 
Sbjct: 340 SSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIV 399

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            D   +  LI  + K G M++A+ +F  M ++ + PD  TY T+I  F ++G +  A   
Sbjct: 400 ADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDK 459

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI-KPTLVSCNTIIKGYC 356
           +  MI+  + P+ I Y  LI G+C  G++ +A  L  EM+ +GI +P  V  N+II   C
Sbjct: 460 FNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLC 519

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G   +A +    ++  G  PD I++N+LI+G+     M+KAF ++  M + G+ PDV+
Sbjct: 520 KEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVV 579

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY+ +L G+CR GR+ D  ++   M+ KG+ P   TY  +++G  +      A +   EM
Sbjct: 580 TYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEM 639

Query: 477 LQRGFVPD 484
           ++ G   D
Sbjct: 640 IESGTTMD 647



 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 153/504 (30%), Positives = 258/504 (51%), Gaps = 36/504 (7%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ALCK   +D A++ L +M   G  PD VTYN +I+ Y   G  +E   +   M+ +GL
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGL 328

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL-------------- 107
            P +FT NS ++ LCK G+   A E  D M   G  PD  TY+ LL              
Sbjct: 329 MPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLN 388

Query: 108 --------------------VESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
                               +++  K  M  EA  IF +M  RGV PD  ++ T+I  FS
Sbjct: 389 LFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFS 448

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DV 205
           R G+L  A+  F +M + GL PD ++Y  +I G+C +G +++A ++  EM+ +G    + 
Sbjct: 449 RMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNT 508

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V +N+I+N LC+   + EA D+F+ ++  G  PD  TF +LI G+   G M KA  + D 
Sbjct: 509 VFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDA 568

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    I+PD+VTY+ L+DG+C+ G ++    L+ +M+S+ + P  I+YGI+++G  + G 
Sbjct: 569 MISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              A ++ +EM+  G    + +C  I+ G CR+    +A     K+ +  V  +    NT
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINT 688

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+   +    ++A  L   +   GLVP+  TY V++T   ++G + +++ +   M + G
Sbjct: 689 MIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG 748

Query: 446 LNPDRSTYTTLINGHVSQNNLKEA 469
             P       +I   + +  + +A
Sbjct: 749 CAPSSRLLNNIIRVLLEKGEISKA 772



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 217/394 (55%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K   +D A +   +M+++GV PD  TY T+I A+ R G L +A    N M   G
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKENMSEA 119
           LKP    YNSLI G C  G   +AKE++ EM+  G+  P+T  +N+++   C++  + EA
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++IF  +   G  PD+++F++LI  +   G++++A      M S G+ PD V Y+ +++G
Sbjct: 528 QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YCRNG + + L +  EML KG     +TY  IL+GL        A  + +EM+E G   D
Sbjct: 588 YCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T   ++ G C++   ++A+ LF  +   ++K +I   NT+ID   KV + E+AN+L+ 
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFD 707

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +YG++I      G V EA  ++  M   G  P+    N II+     G
Sbjct: 708 SISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKG 767

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           + SKA  +LSK+  + +  ++ + + +++ F R+
Sbjct: 768 EISKAGNYLSKVDGKTISLEASTASLMLSLFSRK 801



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 240/478 (50%), Gaps = 1/478 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +++LCK  K   A  F   M  KG  PD VTY+ L++ Y  EG++ +   L NSM G G+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGI 398

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
                 YN LI+   K+G  D A  +  +M + G+ PD  TY T++    R   +++A +
Sbjct: 399 VADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMD 458

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV-PDNVLYTIIINGY 180
            F +M   G+ PD + +++LI  F  +G L +A     EM S G+  P+ V +  IIN  
Sbjct: 459 KFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSL 518

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V+EA  + D ++  G   DV+T+N++++G      + +A  + + M+  G+ PD 
Sbjct: 519 CKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDV 578

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ L+ G+C++G ++  L LF  M  K +KP  +TY  ++ G    G    A K+  +
Sbjct: 579 VTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI    + +  + GI++ G C      EA  L+ ++    +K  +   NT+I    +   
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRK 698

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A+E    + + G+ P++ +Y  +I   ++E ++++A  + S ME  G  P     N 
Sbjct: 699 REEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNN 758

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           I+     +G +  +   L ++  K ++ + ST + +++    +   +E  +    M Q
Sbjct: 759 IIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAMYQ 816



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 187/363 (51%), Gaps = 3/363 (0%)

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           E   R   P + +++ L+    R  +       F      GL  D ++  I++   C   
Sbjct: 109 EARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAK 168

Query: 185 FVLEALK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER--GVFPDFY 241
              +A+  +   M E G   D ++Y+T+L  LC       A DL + M+++  G  P+  
Sbjct: 169 RSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVV 228

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           ++ T+IHG  ++G ++KA NLF  M Q+ + PD+VTY++ ID  CK   M+KA  +   M
Sbjct: 229 SYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM 288

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           IS    P+ ++Y  +I+GY  +G   E   ++ EM  +G+ P + +CN+ +   C+ G +
Sbjct: 289 ISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKS 348

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A EF   M ++G  PD ++Y+ L++G+  E  +     L + ME  G+V D   YN++
Sbjct: 349 KEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNIL 408

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +  + ++G M ++ LI  +M E+G+ PD  TY T+I        L +A    ++M+  G 
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 482 VPD 484
            PD
Sbjct: 469 KPD 471



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 167/332 (50%), Gaps = 1/332 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   C    +  AK  + EM  +G+  P+TV +N++IN+ C+EG + EA  + + +   
Sbjct: 478 LIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHI 537

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P V T+NSLI+G    G+ ++A  VLD M+ +G+ PD  TY+ LL   CR   + + 
Sbjct: 538 GERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDG 597

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM  +GV P  +++  ++     +G+   A     EM  +G   D     II+ G
Sbjct: 598 LILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CRN    EA+ +  ++       ++   NT+++ + + +   EA++LF+ +   G+ P+
Sbjct: 658 LCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPN 717

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +I    K+G++ +A N+F +M +    P     N +I    + GE+ KA    +
Sbjct: 718 ASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLS 777

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            +  + IS    +  ++++ +   G   E  +
Sbjct: 778 KVDGKTISLEASTASLMLSLFSRKGKYREQIK 809



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 90/198 (45%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L  D +   AK    EM + G   D  T   ++   CR    +EA  L   +    
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  +   N++I+ + K  + + A E+ D +   GL P+ +TY  ++    ++ ++ EA+
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEAD 738

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M + G AP     + +I +    G++ +A  Y  ++    +  +    +++++ +
Sbjct: 739 NMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLF 798

Query: 181 CRNGFVLEALKMRDEMLE 198
            R G   E +K    M +
Sbjct: 799 SRKGKYREQIKSLPAMYQ 816


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 265/482 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   ID A+   C M + G+  D+ +YN L++  C  G ++EA    + M   G
Sbjct: 277 IMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHG 336

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYN+L  G    G    A++V+ +ML  GL+PD  TY TL+   C+  N+ EA 
Sbjct: 337 VEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEAL 396

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E   RG   +++ ++ L+    + G+++ AL  F EM++  L PD ++Y+I+I+G 
Sbjct: 397 KLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGL 456

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ GFV  A ++ ++M  K           +L GL +   ++EA + F+      +  D 
Sbjct: 457 CKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDV 516

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  +I G+ +   + +A+ L+  M ++ I P +VT+NTLI+GFC+ G++ +A K+   
Sbjct: 517 VLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEV 576

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + P+ ++Y  L+N YC +G++ E F   +EM    + PT V+   +IKG CR   
Sbjct: 577 IRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNK 636

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             ++ + L  M ++G+ PDS++YNT+I  F + + + KA  L + M      P  +TY V
Sbjct: 637 MHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKV 696

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C  G + D + ++  + ++ +   + TY T+I  H ++  + +A  + ++ML +G
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756

Query: 481 FV 482
           FV
Sbjct: 757 FV 758



 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 153/458 (33%), Positives = 252/458 (55%), Gaps = 1/458 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E++  G      T + LI+  C +  LE+A   ++  S K + P + + N++++  CK G
Sbjct: 227 EIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVG 285

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D A+     M++ GL  D+ +YN LL   C   +M EA     +M + GV PD+V+++
Sbjct: 286 LIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYN 345

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL   F   G +  A    ++M   GL PD V YT +I G+C+ G + EALK+R E L +
Sbjct: 346 TLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSR 405

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  ++V+ YN +L+ LC+   + EA  LF+EM    + PDF  ++ LIHG CK+G + +A
Sbjct: 406 GFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRA 465

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             L++ M  K   P       ++ G  K G + +A   +       +  + + Y I+I+G
Sbjct: 466 YQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG 525

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y  +  + EA +L+Y+M+ +GI P++V+ NT+I G+CR GD  +A + L  +  +G+ P 
Sbjct: 526 YVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPS 585

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            ++Y TL+N +    NM + F  + +ME   +VP  +TY V++ G CRQ +MH+S  +L 
Sbjct: 586 VVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLE 645

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            M  KGL PD  TY T+I        + +A + ++ ML
Sbjct: 646 YMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMML 683



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 245/484 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC    +D A  F  +ME+ GV PD VTYNTL   +   G +  A +++  M  +G
Sbjct: 312 LLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQG 371

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + TY +LI G C+ G  + A ++  E L  G   +   YN LL   C+   + EA 
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM    + PD + +S LI    + G + RA   + +M+     P +     ++ G 
Sbjct: 432 TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGL 491

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG + EA    D       + DVV YN +++G  R   + EA  L+ +M+ERG+ P  
Sbjct: 492 FKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSV 551

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI+G C+ G++ +A  + +++  K + P +VTY TL++ +C+VG M++      +
Sbjct: 552 VTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHE 611

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  + P +++Y +LI G C    + E+ +L   M  KG+ P  V+ NTII+ +C+  +
Sbjct: 612 MEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKE 671

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA +  + M+    DP  ++Y  LIN      ++     +V  +E++ +     TY  
Sbjct: 672 ITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMT 731

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+   C +G++  +     +M+ KG       Y+ +IN    +  + EA  F   ML  G
Sbjct: 732 IIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEG 791

Query: 481 FVPD 484
             PD
Sbjct: 792 VTPD 795



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 243/473 (51%), Gaps = 2/473 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +  A+  + +M  +G+ PD VTY TLI  +C+ G +EEA +L      +G K  V  YN 
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS-RR 129
           L++ LCK GR + A  + DEM  + L PD   Y+ L+   C++  +  A +++ +M  +R
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
                    + L+G+F +NG +  A  YF       L+ D VLY I+I+GY R   + EA
Sbjct: 477 KFPHHFAQRAVLLGLF-KNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEA 535

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           +++  +M+E+G    VVT+NT++NG CR   L EA  +   +  +G+ P   T+TTL++ 
Sbjct: 536 MQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNA 595

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           +C+ GNM +  +    M   ++ P  VTY  LI G C+  +M ++ +L   M ++ + P+
Sbjct: 596 YCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPD 655

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y  +I  +C    +T+A +L+  M+     PT V+   +I   C  GD    D  + 
Sbjct: 656 SVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVV 715

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            +    +     +Y T+I     +  + KA    ++M  +G V  +  Y+ ++   C++G
Sbjct: 716 SIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRG 775

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            + +++     M+ +G+ PD     T++N    Q N    F F   +++ GF+
Sbjct: 776 LITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 146/453 (32%), Positives = 242/453 (53%), Gaps = 4/453 (0%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           + ++ L  AY R   + +A  ++  M     +  V TYNSL++ +      D   +V +E
Sbjct: 171 LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVYNE 227

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           +   G      T + L+   C +  + +A   F   S + V P IVS +T++  F + G 
Sbjct: 228 IKVSGAPQSECTTSILIHGLCEQSKLEDAIS-FLHDSNKVVGPSIVSINTIMSKFCKVGL 286

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D A   F  M   GL+ D+  Y I+++G C  G + EAL   D+M + G   DVVTYNT
Sbjct: 287 IDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +  G     +++ A  +  +ML +G+ PD  T+TTLI GHC+ GN+ +AL L      + 
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            K +++ YN L+   CKVG +E+A  L+ +M + ++ P++I Y ILI+G C  G V  A+
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           +L+ +M  K   P   +   ++ G  ++G+ S+A  +        +  D + YN +I+G+
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
           VR + + +A  L  KM  +G+ P V+T+N ++ GFCR+G + ++  +L  +  KGL P  
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSV 586

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            TYTTL+N +    N++E F F  EM     VP
Sbjct: 587 VTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVP 619



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 210/412 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +I+ A     EME   + PD + Y+ LI+  C+EGF++ A+QL   M  K 
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  F   +++ GL K G    A+   D   +M L  D   YN ++    R + ++EA 
Sbjct: 477 KFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAM 536

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M  RG+ P +V+F+TLI  F R G L  A      ++  GLVP  V YT ++N Y
Sbjct: 537 QLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAY 596

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + E      EM     V   VTY  ++ GLCR   + E+  L   M  +G+ PD 
Sbjct: 597 CEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDS 656

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I   CK   + KAL L+++M   +  P  VTY  LI+  C  G+++  +++   
Sbjct: 657 VTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVS 716

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R I+    +Y  +I  +C+ G V++A   + +M+ KG   ++   + +I   C+ G 
Sbjct: 717 IEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGL 776

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            ++A  F   M+SEGV PD     T++N F ++ N    F  ++ +   G +
Sbjct: 777 ITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 176/331 (53%), Gaps = 10/331 (3%)

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D  L  FR   S GLV D + +      Y R+  + +AL +  +M +      V TYN++
Sbjct: 157 DLLLEKFRNWDSNGLVWDMLAF-----AYSRHEMIHDALFVIAKMKDLNFQASVPTYNSL 211

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           L+ +    ++    D++NE+   G      T + LIHG C+   +  A++     + K +
Sbjct: 212 LHNMRHTDIMW---DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SNKVV 267

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P IV+ NT++  FCKVG ++ A   +  M+   +  +  SY IL++G C  G + EA  
Sbjct: 268 GPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALG 327

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
              +M   G++P +V+ NT+ KG+   G  S A + + KM+ +G++PD ++Y TLI G  
Sbjct: 328 FTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHC 387

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +  N+++A  L  +  ++G   +VI YN++L+  C+ GR+ ++  +   M    L PD  
Sbjct: 388 QMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFI 447

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEM-LQRGF 481
            Y+ LI+G   +  ++ A++ +++M L+R F
Sbjct: 448 VYSILIHGLCKEGFVQRAYQLYEQMRLKRKF 478


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 173/556 (31%), Positives = 273/556 (49%), Gaps = 77/556 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N++C +  +  AK  + +M+   + P+ +TYNT+++ Y ++G  + A  ++  M   G
Sbjct: 231 VLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKKGRFKAAMCVLEDMEKNG 289

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V+TYN +I+ LCK  R   A  +L  M    L+PD  TYNTL+     +  M  A 
Sbjct: 290 VEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAI 349

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF EM R+G+ P + +++TLI  + RNG +D AL    EM+ AG+ P  V Y+ ++NG 
Sbjct: 350 HIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGS 409

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD--------------- 225
                V EA  + D M + GC  DV TY  +L GLC+   L +A                
Sbjct: 410 -----VHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQ 464

Query: 226 --------------------DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                               DL  +M+     PD +T+T L+ G C+ G +  A+ L  +
Sbjct: 465 KTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQM 524

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR--------------------- 304
           M +K + PDIVTY  L+ G  K G+++ A+ L+ ++I +                     
Sbjct: 525 MLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAG 584

Query: 305 ---------------KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
                          K+ PN  SY IL++G+   GH++ +  L+ +MV KGIKPT V+  
Sbjct: 585 KLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYR 644

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I G  + G    A +FL KMV EG+ PD +S++ LIN F  +  M  A  L + M+  
Sbjct: 645 LLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWL 704

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            + P   TY+ ++ G  R+  +  S  +L  M+E GL P  + Y  LIN      ++  A
Sbjct: 705 YMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGA 764

Query: 470 FRFHDEMLQRGFVPDD 485
           FR  +EM   G VP +
Sbjct: 765 FRLKEEMTALGIVPAE 780



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 255/485 (52%), Gaps = 6/485 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C++  ID A   L EM+  GV P  VTY+ ++N     G + EAF + ++M   G
Sbjct: 370 LIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLN-----GSVHEAFSVYDNMEKYG 424

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V+TY +L+ GLCK G   +AKE +  ++ +  + D  T N LL+  C   ++ EA 
Sbjct: 425 CSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEAL 484

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M      PDI +++ L+  F R G++  A++  + M   GLVPD V YT ++ G 
Sbjct: 485 DLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGL 544

Query: 181 CRNGFVLEALKMRDEML-EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            + G V  A  +  E++ ++G   D + YN+++NG  +A  L + +    +M +  V+P+
Sbjct: 545 IKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPN 604

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++  L+HGH K G++++++ L+  M +K IKP  VTY  LI G  K G +E A K   
Sbjct: 605 PASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLD 664

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+   I P+ +S+ +LIN +     +++A +L+  M    + P+  + + +I G  R  
Sbjct: 665 KMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKN 724

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               + + L  MV  G++P    Y  LIN   R  +++ AF L  +M   G+VP  +  +
Sbjct: 725 WLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADS 784

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            I+ G  + G++ +  ++   +I  G+ P  +T+TTL++G   +  + +A      M   
Sbjct: 785 SIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESC 844

Query: 480 GFVPD 484
           G   D
Sbjct: 845 GLKID 849



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 242/485 (49%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK   +  AK F+  +       D  T N L+   C  G L+EA  L   M    
Sbjct: 435 LLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTIN 494

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY  L++G C+KG+   A  +L  ML+ GL PD  TY  LL    ++  +  A 
Sbjct: 495 FIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAAS 554

Query: 121 EIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +F E+  + G+  D +++++++  + + G+L +  M   +M    + P+   Y I+++G
Sbjct: 555 YLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHG 614

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + + G +  ++ +  +M+ KG     VTY  ++ GL +  M+  A    ++M+  G++PD
Sbjct: 615 HIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPD 674

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             +F  LI+   +   M+ AL LF+ M    + P   TY+ +I+G  +   ++ +  +  
Sbjct: 675 RLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLR 734

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM+   + P +  Y  LIN  C  G +  AFRL  EM   GI P  V+ ++I++G  + G
Sbjct: 735 DMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCG 794

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +       ++  G+ P   ++ TL++G  +E  +  A  L S ME+ GL  DV+TYN
Sbjct: 795 KVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYN 854

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++TG C+   + D+  +   M  KGL P+ +TYTTL           E  +  +++  R
Sbjct: 855 VLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDR 914

Query: 480 GFVPD 484
           G VP 
Sbjct: 915 GLVPS 919



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 164/345 (47%), Gaps = 35/345 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N   K  K+   +M + +M Q  VYP+  +YN L++ + ++G L  +  L   M  KG
Sbjct: 576 MMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKG 635

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TY  LI GL K G  + A + LD+M+  G+ PD  +++ L+     K  MS+A 
Sbjct: 636 IKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDAL 695

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M    ++P   ++S +I    R   L  +    R+M  +GL P +  Y  +IN  
Sbjct: 696 QLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAK 755

Query: 181 CRNGFVLEALKMRDEM-----------------------------------LEKGCVMDV 205
           CR G +  A ++++EM                                   +  G V  +
Sbjct: 756 CRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTI 815

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T+ T+++GLC+   +++A  L + M   G+  D  T+  LI G CK   ++ AL L++ 
Sbjct: 816 ATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEE 875

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           M  K ++P++ TY TL +     G   +  KL  D+  R + P+Y
Sbjct: 876 MKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPSY 920



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 17/287 (5%)

Query: 215 LCRAKMLTEADDLFNEMLERG-----VFPDFY-----------TFTTLIHGHCKDGNMNK 258
           L +AKM ++A  L   +   G     VF                F  L++ + K+  +  
Sbjct: 114 LTQAKMHSQAMSLLKHLAMTGFSCSAVFSSLLCTISRCDSNPLVFDLLVNAYVKEKRVVD 173

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A      M     K      N +++   ++GE +       + + RK   +  +  I++N
Sbjct: 174 ASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDVTTCNIVLN 233

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
             C  G++  A  + ++M    + P +++ NTI+  Y + G    A   L  M   GV+ 
Sbjct: 234 SMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEA 292

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D  +YN +I+   + +    A+ L+ +M    L PD  TYN ++ GF  + +M  +  I 
Sbjct: 293 DVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIF 352

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M+ +GL P  +TYTTLI+G+     + EA R   EM   G  P +
Sbjct: 353 NEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSE 399


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 153/485 (31%), Positives = 276/485 (56%), Gaps = 2/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR-EGFLEEAFQLMNSMSGK 59
           +++ LCK  +I+ A+  L E++  G  PD  TY+ + +   + +     A  L     GK
Sbjct: 177 LLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGK 236

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+K   +T + L+NGLCK+G+ ++A+EVL  +++ GL P    YNT++   C+  +M  A
Sbjct: 237 GVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRA 296

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
                +M  RG+ P+ ++F+++I  F     +D+A  + ++M   G+ P    Y I+I+G
Sbjct: 297 ILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDG 356

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y R        ++ +EM E G   +V++Y +++N LC+   + EA+ +  +M+ RGV P+
Sbjct: 357 YGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPN 416

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  LI G C  G + +AL  FD M++  I   IVTYN+LI G CK+G++++A +++ 
Sbjct: 417 ANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFF 476

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + S    P+ I+Y  LI+GY + G+  +   L+  M   G+KPT+ + + +I G  + G
Sbjct: 477 LITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG 536

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              K   F ++M+   + PD + YN +I+ +    ++ KAF+L  +M + G+ PD  TYN
Sbjct: 537 IKLKETLF-NEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYN 595

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G  ++G++ +++ ++  M  KGL P+  TY+ LI GH    +   A+ ++ EML+ 
Sbjct: 596 SLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLEN 655

Query: 480 GFVPD 484
           GF+P+
Sbjct: 656 GFLPN 660



 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 275/486 (56%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+ +I  A+    EM  + + P+ VT+NTLI+ YC+ G ++ A  L   M  + 
Sbjct: 107 LIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEK 166

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + T+NSL++GLCK  R + A+ +L+E+   G  PD  TY+ +     + ++ + A 
Sbjct: 167 VEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAA 226

Query: 121 -EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++ E   +GV  D  + S L+    + G++++A    + +   GLVP  V+Y  I+NG
Sbjct: 227 LDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G +  A+   ++M  +G   + + +N++++  C  +M+ +A++   +M+ +G+ P 
Sbjct: 287 YCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPS 346

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  LI G+ +    ++   + + M +   KP++++Y +LI+  CK G++ +A  +  
Sbjct: 347 VETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM+ R + PN   Y +LI+G C++G + EA R + EM   GI  T+V+ N++IKG C+ G
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMG 466

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+E    + S G  PD I+YN+LI+G+    N  K   L   M+  GL P + T++
Sbjct: 467 KLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFH 526

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +++G  ++G +   E +   M++  L+PDR  Y  +I+ +    ++++AF    EM+  
Sbjct: 527 PLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDM 585

Query: 480 GFVPDD 485
           G  PD+
Sbjct: 586 GVRPDN 591



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 142/447 (31%), Positives = 253/447 (56%), Gaps = 1/447 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ K++ A+  L  + + G+ P  V YNT++N YC+ G ++ A   +  M  +G
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P    +NS+I+  C+    D+A+E + +M+  G++P   TYN L+    R    S   
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  EM   G  P+++S+ +LI    ++G++  A M  R+M   G++P+  +Y ++I+G 
Sbjct: 368 QILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGS 427

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EAL+  DEM + G    +VTYN+++ GLC+   L EA+++F  +   G  PD 
Sbjct: 428 CTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDV 487

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G+   GN  K L L++ M +  +KP I T++ LI G  K G ++    L+ +
Sbjct: 488 ITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNE 546

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   +SP+ + Y  +I+ Y   GHV +AF L  EMV  G++P   + N++I G+ + G 
Sbjct: 547 MLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGK 606

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+  + +  M ++G+ P++ +Y+ LI G    ++ + A+    +M   G +P+V   N 
Sbjct: 607 LSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNE 666

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLN 447
           + TG  + GR+ +++ I   MI  G++
Sbjct: 667 LSTGLRKDGRLQEAQSICSEMIANGMD 693



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 260/484 (53%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V +L +  K D+      EM   G  PD + Y   + A  + G L+ A +L  +M  + 
Sbjct: 37  IVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK 96

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF YN LI GLCK+ R   A+++  EM    L P+  T+NTL+   C+   +  A 
Sbjct: 97  VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAI 156

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M +  V P I++F++L+    +  +++ A     E+K  G VPD   Y+II +G 
Sbjct: 157 GLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGL 216

Query: 181 CR-NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            + +     AL +  E + KG  +D  T + +LNGLC+   + +A+++   ++E G+ P 
Sbjct: 217 LKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPG 276

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              + T+++G+C+ G+M++A+   + M  + ++P+ + +N++ID FC++  ++KA +   
Sbjct: 277 EVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVK 336

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + I+P+  +Y ILI+GY  +   +  F++  EM   G KP ++S  ++I   C+ G
Sbjct: 337 KMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDG 396

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+  L  MV  GV P++  YN LI+G      + +A     +M   G+   ++TYN
Sbjct: 397 KILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYN 456

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+ G++ ++E + + +   G  PD  TY +LI+G+ +  N ++    ++ M + 
Sbjct: 457 SLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKL 516

Query: 480 GFVP 483
           G  P
Sbjct: 517 GLKP 520



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 238/432 (55%), Gaps = 1/432 (0%)

Query: 51  QLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES 110
           +L + M  +G  P       ++  L +  + D   ++  EM+ +G  PD   Y   ++ +
Sbjct: 17  ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
            +  ++  A E+F  M RR V P++  ++ LIG   +  ++  A   F EM    LVP+ 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           V +  +I+GYC+ G V  A+ +R+ M ++     ++T+N++L+GLC+A+ + EA  + NE
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 231 MLERGVFPDFYTFTTLIHGHCK-DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
           +   G  PD +T++ +  G  K D     AL+L+     K +K D  T + L++G CK G
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           ++EKA ++   ++   + P  + Y  ++NGYC +G +  A     +M  +G++P  ++ N
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFN 316

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           ++I  +C      KA+E++ KMV +G+ P   +YN LI+G+ R     + F ++ +ME  
Sbjct: 317 SVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEEN 376

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G  P+VI+Y  ++   C+ G++ ++E++L  M+ +G+ P+ + Y  LI+G  +   L+EA
Sbjct: 377 GEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREA 436

Query: 470 FRFHDEMLQRGF 481
            RF DEM + G 
Sbjct: 437 LRFFDEMSKNGI 448



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 203/381 (53%), Gaps = 2/381 (0%)

Query: 106 LLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           +L+  C +  M S+  E++  M + G  P       ++     + + D  L  F+EM   
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  PD ++Y   +    + G +  A+++ + M  +  V +V  YN ++ GLC+ K + +A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
           + LF EM  R + P+  TF TLI G+CK G ++ A+ L + M ++ ++P I+T+N+L+ G
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYC-SMGHVTEAFRLWYEMVGKGIKP 343
            CK   +E+A  +  ++      P+  +Y I+ +G   S      A  L+ E +GKG+K 
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
              +C+ ++ G C+ G   KA+E L  +V  G+ P  + YNT++NG+ +  +MD+A   +
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            +ME++GL P+ I +N ++  FC    +  +E  + +M+ KG+ P   TY  LI+G+   
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
                 F+  +EM + G  P+
Sbjct: 361 CVFSRCFQILEEMEENGEKPN 381


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 159/521 (30%), Positives = 267/521 (51%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-------- 52
           M+ ALC+  +ID+A   L E+ + G+ P  VTYN L++A C+ G +EEAF+L        
Sbjct: 217 MIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR 276

Query: 53  ---------------------------MNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                                      +  M G G+ P    YN +I   C+KG C  A 
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEAL 336

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++ DEM+  G+     TYN +    C++  M  AE+I  EM   G+      F++++   
Sbjct: 337 KLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWH 396

Query: 146 SR-NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
            R  G+LD  L   REM +  L P++ L T  I   C++G   EA ++  ++L KG  ++
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVN 456

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           V T N +++GLC+   + EA  +   M+  GV  D  T+  +I G CK   M++A+ L D
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRD 516

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M ++  KPD+ T+N  +  +C +G++E+   L   M S  + P+ ++YG +I+GYC   
Sbjct: 517 DMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 576

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A     E++  G++P  V  N +I GY R+G+ S A   L  M   G+ P  ++YN
Sbjct: 577 DMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYN 636

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           +L+        +++  A+ ++   + +   VI Y +I+ GFC+ G++ ++ +    M  +
Sbjct: 637 SLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSR 696

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G+ P++ TYTTL+  +    N +EA +  DEM+  G VPD 
Sbjct: 697 GIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDS 737



 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 242/440 (55%), Gaps = 5/440 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR-EGFLEEAFQLMNSMSGK 59
           +  ALCK+ +++ A+  L EM   G+      +N+++  + R  G L+   +L+  M  +
Sbjct: 357 IAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLAR 416

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            LKP      + I  LCK G+ + A E+  ++L  GL  + AT N L+   C+  NM EA
Sbjct: 417 FLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEA 476

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++   M   GV  D ++++ +I    +  ++D A+    +M   G  PD   + I ++ 
Sbjct: 477 TKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHT 536

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC  G V E L + D+M  +G   D+VTY TI++G C+AK + +A++   E+++ G+ P+
Sbjct: 537 YCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPN 596

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  LI G+ ++GN++ A+ + D M    I+P  VTYN+L+   C  G +E+   ++A
Sbjct: 597 AVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFA 656

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             I + I    I Y I+I G+C +G + EA   + EM  +GI P  ++  T++  Y +SG
Sbjct: 657 QCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSG 716

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  +A +   +MVS G+ PDS+SYNTLI+GF   +++DK     ++M +Q L  D  +YN
Sbjct: 717 NKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYN 776

Query: 420 V----ILTGFCRQGRMHDSE 435
                I T +C++  + ++E
Sbjct: 777 AFVDGITTPWCQKEAVSNAE 796



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 218/461 (47%), Gaps = 77/461 (16%)

Query: 100 TATYNTLLVESCRKE----NMSEAEEIFCEMSRRG------------------------- 130
           TAT + LLV +C       ++S A + F E+S RG                         
Sbjct: 137 TATAD-LLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVAR 195

Query: 131 -----------VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
                      VAPD+ +++ +I    R G++D A     E++ +G+ P  V Y ++++ 
Sbjct: 196 KVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDA 255

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C++G V EA +++  M+E      +VT+  +++GL R +   E   +  EM   G+ P+
Sbjct: 256 LCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPN 315

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL-- 297
              +  +I  HC+ G+ ++AL LFD M  K IK  +VTYN +    CK GEME A K+  
Sbjct: 316 EVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILD 375

Query: 298 -------------------WA---------------DMISRKISPNYISYGILINGYCSM 323
                              W                +M++R + PN       I   C  
Sbjct: 376 EMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKS 435

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G   EA  +W++++GKG+   + + N +I G C+  +  +A + L  MV+ GV+ D I+Y
Sbjct: 436 GKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITY 495

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N +I G  +   MD+A  L   M  +G  PD+ T+N+ L  +C  G++ +   +L +M  
Sbjct: 496 NIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKS 555

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +GL PD  TY T+I+G+    ++ +A  +  E+++ G  P+
Sbjct: 556 EGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPN 596



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 1/165 (0%)

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDSIS 382
           G ++ A   + E+  +G  P++ +C+ +++     G    A +   +M   + V PD  +
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y  +I    R   +D AFA+++++   G+ P V+TYNV++   C+ GR+ ++  +  RM+
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           E  + P   T+  LI+G        E      EM   G  P++  
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVI 318


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 257/476 (53%), Gaps = 3/476 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C  ++++ A   L ++ + G  PDT ++ TLI   C EG + EA  L + M  +G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  Y +LINGLCK G    A  +L  M +    PD   Y TL+   C+    ++A 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G++P+IV+ ++L+      G+         EM  + ++P+ +  T +++  
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A  + D M + G   DVVTY  +++G C    + EA  +F+ M+ +G  P+ 
Sbjct: 295 CKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNV 354

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++ TLI+G+CK   M+KA+ LF+ M ++ + P+ VTYNTLI G C VG ++ A  L+ +
Sbjct: 355 FSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFRE 414

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    P+ ++Y IL++  C   H+ +A  L   + G  + P +     +I G CR+G+
Sbjct: 415 MVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGE 474

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +  S + S+G+ P+  +YN + +G  +   +D+A  L  +M+      D  TYN 
Sbjct: 475 LEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNT 534

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL--KEAFRFHD 474
           I  GF R      +  +L  M+ +G + D ST TTL+ G +S + L   EA +  D
Sbjct: 535 ITQGFLRNNETSRAIQLLEEMLARGFSCDVST-TTLLVGMLSDDGLDQSEAHKLED 589



 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 248/465 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+  +  T N LIN++C    +  AF ++  +   G +P   ++ +LI GLC +G
Sbjct: 99  KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+M+  G  PD   Y TL+   C+  + S A  +   M +    PD+V + 
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TLI    ++ Q  +A   F EM + G+ P+ V    ++   C  G       + +EM++ 
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + + ++  T+++ LC+  M+ +A D+ + M + GV PD  T+T LI GHC    M++A
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD+M  K   P++ +YNTLI+G+CK+  M+KA  L+ +M  +K+ PN ++Y  LI+G
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G + +A  L+ EMV  G  P LV+   ++   C++    KA   L  +    +DPD
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD 458

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
              Y  +I+G  R   ++ A  L S + ++GL P+V TYN++  G C++G + ++  +  
Sbjct: 459 IQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFM 518

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M E   + D  TY T+  G +  N    A +  +EML RGF  D
Sbjct: 519 EMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCD 563



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 236/449 (52%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  ++ +  +         L   M   G+   V+T N LIN  C   R + A  V
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  PDTA++ TL+   C +  + EA  +F +M   G  PD+V ++TLI    +
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+   R M+     PD V+Y  +I+  C++    +A  +  EM+ KG   ++VT
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
            N+++  LC        + L NEM++  + P+  + TT++   CK+G + +A ++ D+M 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q  ++PD+VTY  LIDG C   EM++A K++  M+ +  +PN  SY  LINGYC +  + 
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EM  + + P  V+ NT+I G C  G    A     +MV+ G  PD ++Y  L+
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +  ++DKA AL+  +E   L PD+  Y +++ G CR G + D+  +   +  KGL 
Sbjct: 432 DYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLK 491

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           P+  TY  + +G   +  L EA +   EM
Sbjct: 492 PNVWTYNIMTHGLCKRGLLDEATKLFMEM 520



 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 226/456 (49%), Gaps = 2/456 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           ++ +N   + Y     L++A    N M      P +  +  ++  + K  R      +  
Sbjct: 39  SLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSR 98

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +M   G+  +  T N L+   C    ++ A  +  ++ + G  PD  SF+TLI      G
Sbjct: 99  KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           Q+  AL  F +M   G  PD V+Y  +ING C+ G    A+++   M +  C  DVV Y 
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T+++ LC+ +  T+A +LF+EM+ +G+ P+  T  +L++  C  G       L + M   
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            I P+ ++  T++D  CK G + +A+ +   M    + P+ ++Y  LI+G+C    + EA
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            +++  MV KG  P + S NT+I GYC+     KA     +M  + + P++++YNTLI+G
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE-KGLNP 448
                 +  A AL  +M   G +PD++TY ++L   C+   + D  + L + IE   L+P
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHL-DKAMALLKAIEGSNLDP 457

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D   YT +I+G      L++A      +  +G  P+
Sbjct: 458 DIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 493



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 37/92 (40%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M + LCK   +D A     EM++     D  TYNT+   + R      A QL+  M  +G
Sbjct: 500 MTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 559

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
               V T   L+  L   G        L++M 
Sbjct: 560 FSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMF 591


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 250/485 (51%), Gaps = 33/485 (6%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSG----------------------------- 58
           P     N  +    R G LEEA +L+ SMSG                             
Sbjct: 57  PHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRV 116

Query: 59  -KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
               +P V  YN+++ G C  G+ D A+ ++ +M    + PD+ TYNTL+   C +    
Sbjct: 117 LAACEPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTG 173

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A  +  +M RRG  PD+V+++ L+    +     +A+    EM++ G  PD + Y +++
Sbjct: 174 NALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVV 233

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG C+ G V +A++    +   GC  + V+YN +L GLC A+   +A+ L  EM ++G  
Sbjct: 234 NGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYP 293

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  TF  LI   C+ G +  A+ + D + +    P+ ++YN ++  FCK  +M++A   
Sbjct: 294 PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 353

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M+SR   P+ +SY  L+   C  G V  A  L +++  KG  P L+S NT+I G  +
Sbjct: 354 VELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 413

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +G   +A E L++MV++G+ PD I+Y+T+ +G  RE+ +++A     K+++ G+ P+ + 
Sbjct: 414 AGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVL 473

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN IL G C++   H++  +   MI  G  P+ STYT LI G   +  +KEA     E+ 
Sbjct: 474 YNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELC 533

Query: 478 QRGFV 482
            RG V
Sbjct: 534 SRGVV 538



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 204/376 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +  +A + L +M ++G  PD VTY  L+ A C+    ++A +L++ M  KG
Sbjct: 162 LIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKG 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN ++NG+C++GR D A E L  +   G  P+T +YN +L   C  E   +AE
Sbjct: 222 CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAE 281

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS++G  P++V+F+ LI    R G ++ A+    ++   G  P+++ Y  I++ +
Sbjct: 282 KLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAF 341

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A+   + M+ +GC  D+V+YNT+L  LCR   +  A +L +++ ++G  P  
Sbjct: 342 CKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 401

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ T+I G  K G   +AL L + M  K ++PDI+TY+T+  G C+   +E+A + +  
Sbjct: 402 ISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCK 461

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    I PN + Y  ++ G C       A  L+  M+  G  P   +   +I+G    G 
Sbjct: 462 VQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGL 521

Query: 361 ASKADEFLSKMVSEGV 376
             +A E L ++ S GV
Sbjct: 522 VKEARELLGELCSRGV 537



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 95/167 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+  ++D+A   L +++ KG  P  ++YNT+I+   + G  +EA +L+N M  KG
Sbjct: 372 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG 431

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P + TY+++ +GLC++ R + A     ++  MG+ P+T  YN +L+  C++     A 
Sbjct: 432 LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAI 491

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
           ++F  M   G  P+  +++ LI   +  G +  A     E+ S G+V
Sbjct: 492 DLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 252/487 (51%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  K + +  FL  +  KG  PD +    LI  +     +E+A ++M  +    
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P VF YN++I+G CK  R + A +VL+ M   G  PD  TYN ++   C +  +  A 
Sbjct: 134 -EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  ++      P +++++ LI      G ++ A+    EM + GL+PD   Y  II G 
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  A ++   +  KGC  DV++YN +L          E + L  EM  RG  P+ 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ LI   C+ G +++A+++  +M +K + PD  +Y+ LI   CK G ++ A  +   
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS    P+ ++Y  ++   C  G+  +A  ++ ++ G G  P + S NT+I      GD
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A   +  M+S+GVDPD I+YN+LI+   R+  +++A  L+  ME  G  P VI+YN+
Sbjct: 433 RSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 492

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C+  R+ D+  +   MIEKG  P+ +TY  LI G        EA    + +  R 
Sbjct: 493 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRD 552

Query: 481 FVPDDAF 487
            +  D+F
Sbjct: 553 VISQDSF 559


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 165/515 (32%), Positives = 258/515 (50%), Gaps = 35/515 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC   +I  A   L EM  KG  P    Y+ ++ A CR G    + +++ +M  KG
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                   N ++N +C++G  D A  +L ++   G   D  +YN +L   C  +   + E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R   AP+IV+F+TLIG   RNG  +R      +M   G  PD  +Y  II+G 
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++ + M   G   +VV YNT+L GLC A+   EA++L +EM ++    D 
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  L+   C++G +++ + L + M      PD++TY T+I+GFCK G +++A  L   
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    PN +SY I++ G CS G   +A  L  +M+ +G  P  V+ NT+I   C+ G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L +M+  G  PD ISY+T+I+G  +    ++A  L++ M N+G+ P+ I Y+ 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 421 ILTGFCRQGRMHD--------------SELILWR---------------------MIEKG 445
           I     R+GR++               S+ +L+                      M+  G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             P+ STYT LI G  S+   KEA     E+  RG
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 216/420 (51%), Gaps = 3/420 (0%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V  YN+++ G C+ G+             + + P+  T+  ++   C +  +++A E+  
Sbjct: 79  VVAYNAMVAGYCRAGQ---LAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EMS +G AP    +  ++    R+G    ++     M + G   D     +++N  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V EA+ +  ++   GC  D+V+YN +L GLC AK   + ++L +EM+     P+  TF 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TLI   C++G   +   +   M++    PDI  Y T+IDG CK G +E AN++   M S 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN + Y  ++ G CS     EA  L  EM  K      V+ N ++  +C++G   + 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E L +M+S G  PD I+Y T+INGF +E  +D+A  L+  M + G  P+ ++Y ++L G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C  GR  D+E ++ +MI++G  P+  T+ TLIN    +  +++A     +ML  G  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 226/455 (49%), Gaps = 3/455 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
            V YN ++  YCR G   +        +   + P  +T+  ++ GLC +GR   A EVLD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           EM   G +P    Y+ +L  +CR      +  +   M  +G   D  + + ++      G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +D A+   R++   G   D V Y  ++ G C      +  ++ DEM+   C  ++VT+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T++  LCR  +     ++  +M E G  PD   + T+I G CK+G++  A  + + M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            +KP++V YNT++ G C     ++A +L ++M  +    + +++ IL++ +C  G V   
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  +M+  G  P +++  T+I G+C+ G   +A   L  M S G  P+++SY  ++ G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                    A  L+S+M  QG  P+ +T+N ++   C++G +  +  +L +M+  G +PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +Y+T+I+G       +EA    + M+ +G  P+
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 3/281 (1%)

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VV YN ++ G CRA  L  A  L   +    V P+ YTF  ++ G C  G +  AL + D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M+ K   P    Y+ +++  C+ G    + ++   M ++  + +  +  +++N  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EA  L  ++   G +  +VS N ++KG C +      +E + +MV     P+ +++N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI    R    ++   ++++M   G  PD+  Y  I+ G C++G +  +  IL RM   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           GL P+   Y T++ G  S    KEA     EM Q+    DD
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 165/515 (32%), Positives = 258/515 (50%), Gaps = 35/515 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC   +I  A   L EM  KG  P    Y+ ++ A CR G    + +++ +M  KG
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                   N ++N +C++G  D A  +L ++   G   D  +YN +L   C  +   + E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R   AP+IV+F+TLIG   RNG  +R      +M   G  PD  +Y  II+G 
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++ + M   G   +VV YNT+L GLC A+   EA++L +EM ++    D 
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  L+   C++G +++ + L + M      PD++TY T+I+GFCK G +++A  L   
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    PN +SY I++ G CS G   +A  L  +M+ +G  P  V+ NT+I   C+ G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L +M+  G  PD ISY+T+I+G  +    ++A  L++ M N+G+ P+ I Y+ 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 421 ILTGFCRQGRMHD--------------SELILWR---------------------MIEKG 445
           I     R+GR++               S+ +L+                      M+  G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             P+ STYT LI G  S+   KEA     E+  RG
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 216/420 (51%), Gaps = 3/420 (0%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V  YN+++ G C+ G+             + + P+  T+  ++   C +  +++A E+  
Sbjct: 79  VVAYNAMVAGYCRAGQ---LAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EMS +G AP    +  ++    R+G    ++     M + G   D     +++N  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V EA+ +  ++   GC  D+V+YN +L GLC AK   + ++L +EM+     P+  TF 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TLI   C++G   +   +   M++    PDI  Y T+IDG CK G +E AN++   M S 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN + Y  ++ G CS     EA  L  EM  K      V+ N ++  +C++G   + 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E L +M+S G  PD I+Y T+INGF +E  +D+A  L+  M + G  P+ ++Y ++L G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C  GR  D+E ++ +MI++G  P+  T+ TLIN    +  +++A     +ML  G  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 226/455 (49%), Gaps = 3/455 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
            V YN ++  YCR G   +        +   + P  +T+  ++ GLC +GR   A EVLD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           EM   G +P    Y+ +L  +CR      +  +   M  +G   D  + + ++      G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +D A+   R++   G   D V Y  ++ G C      +  ++ DEM+   C  ++VT+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T++  LCR  +     ++  +M E G  PD   + T+I G CK+G++  A  + + M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            +KP++V YNT++ G C     ++A +L ++M  +    + +++ IL++ +C  G V   
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  +M+  G  P +++  T+I G+C+ G   +A   L  M S G  P+++SY  ++ G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                    A  L+S+M  QG  P+ +T+N ++   C++G +  +  +L +M+  G +PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +Y+T+I+G       +EA    + M+ +G  P+
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 3/281 (1%)

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VV YN ++ G CRA  L  A  L   +    V P+ YTF  ++ G C  G +  AL + D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M+ K   P    Y+ +++  C+ G    + ++   M ++  + +  +  +++N  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EA  L  ++   G +  +VS N ++KG C +      +E + +MV     P+ +++N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI    R    ++   ++++M   G  PD+  Y  I+ G C++G +  +  IL RM   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           GL P+   Y T++ G  S    KEA     EM Q+    DD
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 165/515 (32%), Positives = 258/515 (50%), Gaps = 35/515 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC   +I  A   L EM  KG  P    Y+ ++ A CR G    + +++ +M  KG
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                   N ++N +C++G  D A  +L ++   G   D  +YN +L   C  +   + E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R   AP+IV+F+TLIG   RNG  +R      +M   G  PD  +Y  II+G 
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++ + M   G   +VV YNT+L GLC A+   EA++L +EM ++    D 
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  L+   C++G +++ + L + M      PD++TY T+I+GFCK G +++A  L   
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    PN +SY I++ G CS G   +A  L  +M+ +G  P  V+ NT+I   C+ G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L +M+  G  PD ISY+T+I+G  +    ++A  L++ M N+G+ P+ I Y+ 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 421 ILTGFCRQGRMHD--------------SELILWR---------------------MIEKG 445
           I     R+GR++               S+ +L+                      M+  G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             P+ STYT LI G  S+   KEA     E+  RG
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 216/420 (51%), Gaps = 3/420 (0%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V  YN+++ G C+ G+             + + P+  T+  ++   C +  +++A E+  
Sbjct: 79  VVAYNAMVAGYCRAGQ---LAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EMS +G AP    +  ++    R+G    ++     M + G   D     +++N  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V EA+ +  ++   GC  D+V+YN +L GLC AK   + ++L +EM+     P+  TF 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TLI   C++G   +   +   M++    PDI  Y T+IDG CK G +E AN++   M S 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN + Y  ++ G CS     EA  L  EM  K      V+ N ++  +C++G   + 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E L +M+S G  PD I+Y T+INGF +E  +D+A  L+  M + G  P+ ++Y ++L G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C  GR  D+E ++ +MI++G  P+  T+ TLIN    +  +++A     +ML  G  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 226/455 (49%), Gaps = 3/455 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
            V YN ++  YCR G   +        +   + P  +T+  ++ GLC +GR   A EVLD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           EM   G +P    Y+ +L  +CR      +  +   M  +G   D  + + ++      G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +D A+   R++   G   D V Y  ++ G C      +  ++ DEM+   C  ++VT+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T++  LCR  +     ++  +M E G  PD   + T+I G CK+G++  A  + + M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            +KP++V YNT++ G C     ++A +L ++M  +    + +++ IL++ +C  G V   
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  +M+  G  P +++  T+I G+C+ G   +A   L  M S G  P+++SY  ++ G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                    A  L+S+M  QG  P+ +T+N ++   C++G +  +  +L +M+  G +PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +Y+T+I+G       +EA    + M+ +G  P+
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 3/281 (1%)

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VV YN ++ G CRA  L  A  L   +    V P+ YTF  ++ G C  G +  AL + D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M+ K   P    Y+ +++  C+ G    + ++   M ++  + +  +  +++N  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EA  L  ++   G +  +VS N ++KG C +      +E + +MV     P+ +++N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI    R    ++   ++++M   G  PD+  Y  I+ G C++G +  +  IL RM   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           GL P+   Y T++ G  S    KEA     EM Q+    DD
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 165/515 (32%), Positives = 258/515 (50%), Gaps = 35/515 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC   +I  A   L EM  KG  P    Y+ ++ A CR G    + +++ +M  KG
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                   N ++N +C++G  D A  +L ++   G   D  +YN +L   C  +   + E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R   AP+IV+F+TLIG   RNG  +R      +M   G  PD  +Y  II+G 
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++ + M   G   +VV YNT+L GLC A+   EA++L +EM ++    D 
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  L+   C++G +++ + L + M      PD++TY T+I+GFCK G +++A  L   
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    PN +SY I++ G CS G   +A  L  +M+ +G  P  V+ NT+I   C+ G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L +M+  G  PD ISY+T+I+G  +    ++A  L++ M N+G+ P+ I Y+ 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 421 ILTGFCRQGRMHD--------------SELILWR---------------------MIEKG 445
           I     R+GR++               S+ +L+                      M+  G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             P+ STYT LI G  S+   KEA     E+  RG
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 216/420 (51%), Gaps = 3/420 (0%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V  YN+++ G C+ G+             + + P+  T+  ++   C +  +++A E+  
Sbjct: 79  VVAYNAMVAGYCRAGQ---LAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EMS +G AP    +  ++    R+G    ++     M + G   D     +++N  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V EA+ +  ++   GC  D+V+YN +L GLC AK   + ++L +EM+     P+  TF 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TLI   C++G   +   +   M++    PDI  Y T+IDG CK G +E AN++   M S 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN + Y  ++ G CS     EA  L  EM  K      V+ N ++  +C++G   + 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E L +M+S G  PD I+Y T+INGF +E  +D+A  L+  M + G  P+ ++Y ++L G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C  GR  D+E ++ +MI++G  P+  T+ TLIN    +  +++A     +ML  G  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 226/455 (49%), Gaps = 3/455 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
            V YN ++  YCR G   +        +   + P  +T+  ++ GLC +GR   A EVLD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           EM   G +P    Y+ +L  +CR      +  +   M  +G   D  + + ++      G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +D A+   R++   G   D V Y  ++ G C      +  ++ DEM+   C  ++VT+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T++  LCR  +     ++  +M E G  PD   + T+I G CK+G++  A  + + M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            +KP++V YNT++ G C     ++A +L ++M  +    + +++ IL++ +C  G V   
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  +M+  G  P +++  T+I G+C+ G   +A   L  M S G  P+++SY  ++ G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                    A  L+S+M  QG  P+ +T+N ++   C++G +  +  +L +M+  G +PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +Y+T+I+G       +EA    + M+ +G  P+
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 3/281 (1%)

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VV YN ++ G CRA  L  A  L   +    V P+ YTF  ++ G C  G +  AL + D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M+ K   P    Y+ +++  C+ G    + ++   M ++  + +  +  +++N  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EA  L  ++   G +  +VS N ++KG C +      +E + +MV     P+ +++N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI    R    ++   ++++M   G  PD+  Y  I+ G C++G +  +  IL RM   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           GL P+   Y T++ G  S    KEA     EM Q+    DD
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 153/474 (32%), Positives = 254/474 (53%), Gaps = 1/474 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D+ K+F  EM +K V P+ +TYNT+I+ + ++G LE  F+L + M   GLKP V TYN L
Sbjct: 206 DAVKLF-DEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVL 264

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++GLC+ GR      VLDEM    + PD  TY+ L     R  +      +F E  ++GV
Sbjct: 265 LSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGV 324

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
                + S L+    ++G++ +A    + + ++GL+   V+Y  +INGYC+ G +  A  
Sbjct: 325 KIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFS 384

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  +M  +    D +TYN ++NGL + + +TEA DL  EM + GV P   TF TLI  + 
Sbjct: 385 IFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYG 444

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           + G + K   +   M +K +KP++V+Y ++++ FCK G++ +A  +  DM  + + P   
Sbjct: 445 RAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQ 504

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y  +I+ Y   G   +AF L  +M   G+ P++V+ N +IKG C+    S+A+E L  +
Sbjct: 505 VYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSL 564

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            + G+ PD ISYNTLI+      N D+A  L  +M   G+ P   TY ++ +     GR+
Sbjct: 565 RNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRV 624

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           H+ E +  +M++K + P    Y  +++ +       +      EM  +G    D
Sbjct: 625 HEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGD 678



 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 253/458 (55%), Gaps = 3/458 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK-PGVFTYNSLINGLCKKGR-CDRAK 85
           PDT T+N  + A    G L+EA  ++  M   G   P  F+YN +I GL K G  CD  K
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            + DEM +  + P+  TYNT++    +K ++     ++ +M R G+ P++++++ L+   
Sbjct: 210 -LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGL 268

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G++        EM S  +VPD   Y+I+ +G+ R G     L + +E ++KG  +  
Sbjct: 269 CRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T + +LNGLC+   +++A+++   ++  G+      + TLI+G+C+ G++  A ++F  
Sbjct: 329 YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQ 388

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  + I+PD +TYN LI+G  KV  + +A+ L  +M    ++P+  ++  LI+ Y   G 
Sbjct: 389 MKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + + F +  +M  KG+KP +VS  +I+  +C++G   +A   L  M  + V P +  YN 
Sbjct: 449 LEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNA 508

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+ ++   + D+AF L  KM++ G+ P ++TYN+++ G C+Q ++ ++E +L  +   G
Sbjct: 509 IIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYG 568

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           L PD  +Y TLI+    ++N   A     EM + G  P
Sbjct: 569 LAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKP 606



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 228/456 (50%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  +YN +I    + G   +A +L + M  K + P   TYN++I+G  KKG  +    +
Sbjct: 186 PNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +ML+ GL P+  TYN LL   CR   M E   +  EM+ R + PD  ++S L    SR
Sbjct: 246 WSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSR 305

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G     L  F E    G+       +I++NG C++G + +A ++   ++  G +   V 
Sbjct: 306 TGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT++NG C+   L  A  +F +M  R + PD  T+  LI+G  K   + +A +L   M 
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  + P + T+NTLID + + G++EK   + +DM  + + PN +SYG ++N +C  G + 
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +M  K + P     N II  Y   G   +A     KM S GV P  ++YN LI
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLI 545

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  ++  + +A  L+  + N GL PDVI+YN +++  C +     +  +   M + G+ 
Sbjct: 546 KGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIK 605

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           P   TY  L +       + E    + +ML +  VP
Sbjct: 606 PSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVP 641



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 230/458 (50%), Gaps = 2/458 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++   K   ++S      +M + G+ P+ +TYN L++  CR G + E   +++ M+ + 
Sbjct: 229 MIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRK 288

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTY+ L +G  + G       + +E ++ G+     T + LL   C+   +S+AE
Sbjct: 289 MVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAE 348

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   +   G+    V ++TLI  + + G L+ A   F++MKS  + PD++ Y  +ING 
Sbjct: 349 EVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL 408

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + EA  +  EM + G    V T+NT+++   RA  L +   + ++M E+G+ P+ 
Sbjct: 409 GKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNV 468

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ ++++  CK+G + +A+ + D M  K + P    YN +ID + + G  ++A  L   
Sbjct: 469 VSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEK 528

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  + P+ ++Y +LI G C    ++EA  L   +   G+ P ++S NT+I   C   +
Sbjct: 529 MKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSN 588

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E   +M   G+ P   +Y  L +       + +   L  +M ++ +VP    YN+
Sbjct: 589 TDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNI 648

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++  + + G     E +   M +KG+      YT++ N
Sbjct: 649 MVDAYAKCGEESKVEALRKEMSDKGIA--VGDYTSMTN 684



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 36/258 (13%)

Query: 263 FDIMTQKSIKPDIVT------------------------------------YNTLIDGFC 286
           F+++     +PD  T                                    YN +I G  
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLW 199

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G    A KL+ +M  + + PN+I+Y  +I+G+   G +   FRLW +M+  G+KP ++
Sbjct: 200 KAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVI 259

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + N ++ G CR+G   +    L +M S  + PD  +Y+ L +G  R  +     +L  + 
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
             +G+     T +++L G C+ G++  +E +L  ++  GL      Y TLING+    +L
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379

Query: 467 KEAFRFHDEMLQRGFVPD 484
           + AF    +M  R   PD
Sbjct: 380 EGAFSIFQQMKSRLIRPD 397



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 4/129 (3%)

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL-VPDV 415
           R  D   A E L   V+    PD+ ++N  +   V   ++D+A  ++ +M   G   P+ 
Sbjct: 132 RHADVRGAFELL---VAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNA 188

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            +YNV++ G  + G   D+  +   M EK + P+  TY T+I+GH+ + +L+  FR   +
Sbjct: 189 FSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQ 248

Query: 476 MLQRGFVPD 484
           ML+ G  P+
Sbjct: 249 MLRHGLKPN 257


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 260/491 (52%), Gaps = 6/491 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++D A      MEQ+G+ PD + Y+TLI+ Y + G L    +L +    KG
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V  ++S I+   K G    A  V   ML  G+SP+  TY  L+   C+   + EA 
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ ++ +RG+ P IV++S+LI  F + G L      + +M   G  PD V+Y ++++G 
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +L A++   +ML +   ++VV +N++++G CR     EA  +F  M   G+ PD 
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531

Query: 241 YTFTTLIH------GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            TFTT++         CK       L LFD+M +  I  DI   N +I    K   +E A
Sbjct: 532 ATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 591

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
           +K + ++I  K+ P+ ++Y  +I GYCS+  + EA R++  +      P  V+   +I  
Sbjct: 592 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 651

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C++ D   A    S M  +G  P++++Y  L++ F +  +++ +F L  +M+ +G+ P 
Sbjct: 652 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 711

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           +++Y++I+ G C++GR+ ++  I  + I+  L PD   Y  LI G+     L EA   ++
Sbjct: 712 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 771

Query: 475 EMLQRGFVPDD 485
            ML+ G  PDD
Sbjct: 772 HMLRNGVKPDD 782



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 247/490 (50%), Gaps = 16/490 (3%)

Query: 6   CKDHKIDSA-KMFLCEMEQKGVYPDTVTY---NTLINAYCREGFLEEAFQLMNSMSGKGL 61
           C+   +D A ++F+   +   V P    Y   N+LI +  R   + + F   + +   G+
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSD-RVDLIADHF---DKLCRGGI 212

Query: 62  KP-GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +P GV  +  +++ L  KG   +A +    +++ G      + N +L +    + +  A 
Sbjct: 213 EPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL-KGLSVDQIEVAS 271

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   +   G AP++V+F TLI  F + G++DRA   F+ M+  G+ PD + Y+ +I+GY
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +    K+  + L KG  +DVV +++ ++   ++  L  A  ++  ML +G+ P+ 
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI G C+DG + +A  ++  + ++ ++P IVTY++LIDGFCK G +     L+ D
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI     P+ + YG+L++G    G +  A R   +M+G+ I+  +V  N++I G+CR   
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK------AFALVSKMENQGLVPD 414
             +A +    M   G+ PD  ++ T++   + E+   K         L   M+   +  D
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           +   NV++    +  R+ D+      +IE  + PD  TY T+I G+ S   L EA R  +
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631

Query: 475 EMLQRGFVPD 484
            +    F P+
Sbjct: 632 LLKVTPFGPN 641



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 209/393 (53%), Gaps = 8/393 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+D +I  A     ++ ++G+ P  VTY++LI+ +C+ G L   F L   M   G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  Y  L++GL K+G    A     +ML   +  +   +N+L+   CR     EA 
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGI------FSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           ++F  M   G+ PD+ +F+T++ +      F ++ +    L  F  M+   +  D  +  
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 576

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+   +   + +A K  + ++E     D+VTYNT++ G C  + L EA+ +F E+L+ 
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKV 635

Query: 235 GVF-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
             F P+  T T LIH  CK+ +M+ A+ +F IM +K  KP+ VTY  L+D F K  ++E 
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           + KL+ +M  + ISP+ +SY I+I+G C  G V EA  ++++ +   + P +V+   +I+
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           GYC+ G   +A      M+  GV PD +    L
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 217/433 (50%), Gaps = 14/433 (3%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQ--------MG----LSPDTATYNTLLVESCRKE 114
           ++ ++ + L + G  D A +V DEM+         +G     S D      L+   CR  
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV-LY 173
            + +A EIF   ++ GV     S   ++     + ++D    +F ++   G+ P  V  +
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +++     G V +AL     ++E+G  + +V+ N +L GL     +  A  L + +L+
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLD 279

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G  P+  TF TLI+G CK G M++A +LF +M Q+ I+PD++ Y+TLIDG+ K G +  
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
            +KL++  + + +  + + +   I+ Y   G +  A  ++  M+ +GI P +V+   +IK
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G C+ G   +A     +++  G++P  ++Y++LI+GF +  N+   FAL   M   G  P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           DV+ Y V++ G  +QG M  +     +M+ + +  +   + +LI+G    N   EA +  
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519

Query: 474 DEMLQRGFVPDDA 486
             M   G  PD A
Sbjct: 520 RLMGIYGIKPDVA 532


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 157/486 (32%), Positives = 260/486 (53%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC++ +   A   L EM Q  + PD V+YNT+I  +C    LE+A QL N M G G
Sbjct: 148 LLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSG 207

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               + T+  LI+  CK G+ D A  +L EM   GL  D   Y +L+   C    +   +
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGK 267

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E+  RG +P  ++++TLI  F + G+L  A   F  M   G+ P+   YT +I+G 
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGL 327

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EAL++ + ML+K    +VVTYN I+N LC+  ++ +A ++   M +R   PD 
Sbjct: 328 CGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDN 387

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKS--IKPDIVTYNTLIDGFCKVGEMEKANKLW 298
            T+ +L+ G C  G++++A  L  +M + S    PD++++N LI G CK   + +A  ++
Sbjct: 388 ITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIY 447

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             ++ +  + + ++  IL+N     G V +A  LW ++    I P   +  T+I G+C++
Sbjct: 448 DLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKT 507

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  + A   L KM    + P    YN L++   ++  +D+A+ L  +M+     PDVI++
Sbjct: 508 GMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISF 567

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N+++ G  + G +  +E +L  M   GL+PD  TY+ LIN  +    L EA  F D+M+ 
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMID 627

Query: 479 RGFVPD 484
            GF PD
Sbjct: 628 SGFEPD 633



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 154/486 (31%), Positives = 257/486 (52%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  +++ A     EM+  G     VT+  LI+A+C+ G ++EA  L+  M  KG
Sbjct: 183 VIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKG 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  +  Y SLI G C  G  DR K + DE+L+ G SP   TYNTL+   C+   + EA 
Sbjct: 243 LEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEAS 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF  M  RGV P++ +++ LI      G+   AL     M      P+ V Y IIIN  
Sbjct: 303 EIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKL 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF--P 238
           C++  V +AL++ + M ++    D +TYN++L GLC    L EA  L   ML+   +  P
Sbjct: 363 CKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  +F  LIHG CK   +++AL+++D++ +K    DIVT N L++   K G++ KA +LW
Sbjct: 423 DVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELW 482

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             + + KI PN  +Y  +I+G+C  G +  A  L  +M    + P++   N ++   C+ 
Sbjct: 483 KQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKK 542

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A     +M  +   PD IS+N +I+G ++  ++  A +L+  M + GL PD+ TY
Sbjct: 543 GTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTY 602

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++  F + G + ++     +MI+ G  PD     +++   +SQ    +   F  +++ 
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVD 662

Query: 479 RGFVPD 484
           +  V D
Sbjct: 663 KDVVLD 668



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 200/368 (54%), Gaps = 2/368 (0%)

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +   M +RG A ++ +++ L+    RN +  +A+   REM+   L+PD V Y  +I 
Sbjct: 126 AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIR 185

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C    + +AL++ +EM   GC   +VT+  +++  C+A  + EA  L  EM  +G+  
Sbjct: 186 GFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEA 245

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +T+LI G C  G +++   LFD + ++   P  +TYNTLI GFCK+G +++A++++
Sbjct: 246 DLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIF 305

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+ R + PN  +Y  LI+G C +G   EA +L   M+ K  +P +V+ N II   C+ 
Sbjct: 306 EFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKD 365

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM--ENQGLVPDVI 416
              + A E +  M      PD+I+YN+L+ G   + ++D+A  L+  M  ++    PDVI
Sbjct: 366 SLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           ++N ++ G C+  R+H +  I   ++EK    D  T   L+N  +   ++ +A     ++
Sbjct: 426 SFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQI 485

Query: 477 LQRGFVPD 484
                VP+
Sbjct: 486 SNSKIVPN 493



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 179/342 (52%), Gaps = 9/342 (2%)

Query: 148 NGQLDRALMYFREMKSAG----LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
           N QL  A+  F++   +G       +N++ T++ +   RN  V  A     +MLE    +
Sbjct: 51  NPQLKNAVSVFQQAVDSGGSLSFAGNNLMATLVRS---RNHEV--AFSFYRKMLETDTFI 105

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           + V+ + +L    + +    A  +   ML+RG   + Y +  L+ G C++    KA++L 
Sbjct: 106 NFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLL 165

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M Q S+ PD+V+YNT+I GFC+  E+EKA +L  +M     S + +++GILI+ +C  
Sbjct: 166 REMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKA 225

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G + EA  L  EM  KG++  L+   ++I+G+C  G+  +      +++  G  P +I+Y
Sbjct: 226 GKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           NTLI GF +   + +A  +   M  +G+ P+V TY  ++ G C  G+  ++  +L  M++
Sbjct: 286 NTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQ 345

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           K   P+  TY  +IN     + + +A    + M +R   PD+
Sbjct: 346 KDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDN 387



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 139/300 (46%), Gaps = 3/300 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY--PDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++  LC    +D A   L  M +   Y  PD +++N LI+  C+   L +A  + + +  
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVE 452

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           K     + T N L+N   K G  ++A E+  ++    + P++ TY T++   C+   ++ 
Sbjct: 453 KLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNV 512

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A+ + C+M    + P +  ++ L+    + G LD+A   F EM+     PD + + I+I+
Sbjct: 513 AKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMID 572

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G  + G +  A  +   M   G   D+ TY+ ++N   +   L EA   F++M++ G  P
Sbjct: 573 GSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEP 632

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC-KVGEMEKANKL 297
           D +   +++      G  +K       +  K +  D     T++D  C   G M+ A +L
Sbjct: 633 DAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRL 692



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 120/234 (51%), Gaps = 8/234 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+  K   ++ A     ++    + P++ TY T+I+ +C+ G L  A  L+  M    
Sbjct: 465 LLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSE 524

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P VF YN L++ LCKKG  D+A  + +EM +    PD  ++N ++  S +  ++  AE
Sbjct: 525 LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAE 584

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   MS  G++PD+ ++S LI  F + G LD A+ +F +M  +G  PD  +   ++   
Sbjct: 585 SLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYC 644

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA--------KMLTEADD 226
              G   +  +   ++++K  V+D     T+++ +C +        ++L  ADD
Sbjct: 645 ISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVADD 698


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 253/480 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C+     SA   L ++  +G   D    N ++NA C +G ++EA  L+  +   G
Sbjct: 163 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 222

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V +YN+++ GLC   R    +E+++EM++M   P+  T+NTL+   CR        
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 282

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M   G  PDI  ++T+I    + G L+ A      M S GL P+ V Y  ++ G 
Sbjct: 283 EVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGL 342

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      E  ++  EM +K C +D VT+N +++  C+  ++    +L  +MLERG  PD 
Sbjct: 343 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDV 402

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TT+I+G CK+G +++A+ L   MT    KP+ ++Y  ++ G C       A  L + 
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +    N I++  LIN  C  G V +A  L  +M+  G  P L+S +T+I G  ++G 
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L+ MV++G+ P++I Y+++ +   RE  ++K   +   +++  +  D + YN 
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 582

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++  C++G    +   L  M+  G  P+ STYT LI G  S+  +KEA     E+  +G
Sbjct: 583 VISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 209/417 (50%), Gaps = 3/417 (0%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           YN+++ G C+ G+ + A+ +      + + P+  TY  ++   C +  +++A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           RRG AP    +  ++    R G    A+    ++ + G   D     +++N  C  G V 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EAL +  ++   GC  DVV+YN +L GLC AK      +L  EM+     P+  TF TLI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
              C++G   +   +   M +    PDI  Y T+IDG CK G +E A+++   M S  + 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN + Y  L+ G CS     E   L  EM  K      V+ N ++  +C++G   +  E 
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           L +M+  G  PD I+Y T+INGF +E  +D+A  L+  M   G  P+ I+Y ++L G C 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             R  D+E ++ +MI++G   +  T+ TLIN    +  +++A     +ML  G  PD
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 132/278 (47%), Gaps = 3/278 (1%)

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ G CRA  L  A  L   +    V P+ YT+  ++   C  G +  AL + D M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++   P    Y+ +++  C+ G    A ++  D+ +R  + +  +  +++N  C  G V 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L  ++   G +P +VS N ++KG C +       E + +MV     P+ +++NTLI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   R    ++   ++++M   G  PD+  Y  I+ G C++G +  +  IL RM   GL 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           P+   Y TL+ G  S    +E      EM  +    DD
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 367


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 147/452 (32%), Positives = 246/452 (54%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           +N ++++  +      A      M  K ++P +FT+N LIN  C  G  + A  VL ++ 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           ++G  PDT T  TL+   C    + EA     ++  +G   D VS+ TLI    + G+  
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            AL   R++    + P+ V+Y  II+  C++  V+ A  +  EM+ K    DVVTY T++
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            G      L EA  LFN+ML + + PD YTF  L+ G CK+G M KA N+  +M ++ + 
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            +IVTYN+L+DG+  V +  KA  ++  M  R ++P+  SY I+ING C    V EA  L
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + EM  K + P  V+ N++I G  + G  S A + +++M + G   D I+Y++L++   +
Sbjct: 367 FKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCK 426

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              +DKA  L++K+++QG+ P++ TY +++ G C+ GR+ D++ +   ++ KG + D   
Sbjct: 427 NHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKM 486

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y  ++NG   +    EA     +M   G +PD
Sbjct: 487 YNVMVNGLCKEGLFDEALSLVSKMEDNGCIPD 518



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 244/480 (50%), Gaps = 35/480 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++L K +   +A  F  +ME K + PD  T+N LIN +C  G L  AF ++  +   G
Sbjct: 70  ILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLG 129

Query: 61  LKPGVFT-----------------------------------YNSLINGLCKKGRCDRAK 85
             P   T                                   Y +LINGLCK G    A 
Sbjct: 130 FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAAL 189

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +VL ++  + + P+   YNT++   C+ + +  A ++  EM  + + PD+V+++TLI   
Sbjct: 190 QVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGC 249

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+L  A+  F +M    + PD   + I+++G C+ G + +A  +   M+++G   ++
Sbjct: 250 LIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNI 309

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYN++++G    K   +A  +FN M  RGV PD  +++ +I+G CK   +++A+NLF  
Sbjct: 310 VTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKE 369

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  KS+ P+ VTYN+LIDG  K G +  A  L  +M +R    + I+Y  L++  C    
Sbjct: 370 MHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQ 429

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A  L  ++  +GI+P + +   ++ G C++G    A      ++ +G   D   YN 
Sbjct: 430 VDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNV 489

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           ++NG  +E   D+A +LVSKME+ G +PD +TY  ++       +   +  +L  MI +G
Sbjct: 490 MVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 74/132 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK+H++D A   + +++ +G+ P+  TY  L++  C+ G L++A  +   +  KG
Sbjct: 420 LLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKG 479

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V  YN ++NGLCK+G  D A  ++ +M   G  PD  TY TL+      +   +A 
Sbjct: 480 YHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAV 539

Query: 121 EIFCEMSRRGVA 132
           ++  EM  +G A
Sbjct: 540 KLLREMIVQGSA 551



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN LCK+   D A   + +ME  G  PD VTY TL+ A       ++A +L+  M  +G
Sbjct: 490 MVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549

Query: 61  LKPG 64
              G
Sbjct: 550 SAVG 553


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 271/503 (53%), Gaps = 20/503 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+   +  A+  +  +   GV  D +  NTLI+ YC  G + +A +L+ +     
Sbjct: 203 LVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSD 262

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-------------------GLSPDTA 101
           +K  + TYN+L+   CK G   RA+ + +E+L                      L P   
Sbjct: 263 VKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLV 322

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           TY TL+   C+   + E+  ++ +M   G+ PD+V+ S+++  F R+G+L  A + FREM
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
              GL P++V Y  IIN   ++G V+EA  ++ +M+ +G   D+VT  T+++GL +    
Sbjct: 383 YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKT 442

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
            EA+++F  +L+  + P+  T++ L+ G+CK G M  A  +   M ++ + P+++T++++
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSI 502

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           I+G+ K G + KA  +  +M+ R + PN I Y ILI+GY   G    A     EM  + +
Sbjct: 503 INGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRL 562

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
           + + V  + ++    R G   +A   +  M S+G+DPD ++Y +LI+G+ +E N   A +
Sbjct: 563 EESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 622

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +V +M+ + +  DV+ YN ++ G  R G+ +D   +  RMIE GL PD  TY T+IN + 
Sbjct: 623 IVQEMKEKNIRFDVVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDCITYNTIINTYC 681

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
            +   ++A    +EM   G +P+
Sbjct: 682 IKGKTEDALDILNEMKSYGIMPN 704



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 147/481 (30%), Positives = 265/481 (55%), Gaps = 1/481 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
             C+  K+  A +   EM + G+ P+ V+Y T+IN+  + G + EAF L + M  +G+  
Sbjct: 365 GFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF 424

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + T  ++++GL K G+   A+EV + +L++ L+P+  TY+ LL   C+   M  AE + 
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M +  V P++++FS++I  +++ G L +A+   REM    ++P+ ++Y I+I+GY + 
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G    A     EM  +      V ++ +LN L R   + EA  L  +M  +G+ PD   +
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 604

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +LI G+ K+GN   AL++   M +K+I+ D+V YN LI G  ++G+ +    + + MI 
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIE 663

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             ++P+ I+Y  +IN YC  G   +A  +  EM   GI P  V+ N +I G C++G   K
Sbjct: 664 LGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEK 723

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A+  L +M+     P  I++  L+  + R E  DK   +  K+   GL   +  YN ++T
Sbjct: 724 AESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLIT 783

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            FCR G    ++++L  M+++G++ D  TY  LI G+ + +++++A + + +M   G  P
Sbjct: 784 VFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAP 843

Query: 484 D 484
           +
Sbjct: 844 N 844



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/463 (33%), Positives = 247/463 (53%), Gaps = 11/463 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ VTY+ L++ YC+ G +E A  ++  M  + + P V T++S+ING  KKG   +A +V
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC-EMSRRGVAPDIVSFSTLIGIFS 146
           L EM+Q  + P+T  Y  +L++   K    +  + FC EM  R +    V F  L+    
Sbjct: 519 LREMVQRNVMPNTIVY-AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLK 577

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           R G++D A     +M S G+ PD V Y  +I+GY + G  L AL +  EM EK    DVV
Sbjct: 578 RVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVV 637

Query: 207 TYNTILNGLCRAKMLTEADDLF--NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            YN ++ GL R   L + D  +  + M+E G+ PD  T+ T+I+ +C  G    AL++ +
Sbjct: 638 AYNALIKGLLR---LGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILN 694

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M    I P+ VTYN LI G CK G +EKA     +M+  +  P  I++  L+  Y    
Sbjct: 695 EMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSE 754

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
              +  ++  ++V  G++ +L   NT+I  +CR G   KA   L +MV  G+  D ++YN
Sbjct: 755 KADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYN 814

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI-- 442
            LI G+    +++KA    S+M   G+ P++ TYN +L G    G M +      +++  
Sbjct: 815 ALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSE 874

Query: 443 --EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             E+GL P+ +TY  L++G+    N K+    H EM+ +GFVP
Sbjct: 875 MNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVP 917



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 257/519 (49%), Gaps = 42/519 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  K++ A++ L +ME++ V P+ +T++++IN Y ++G L +A  ++  M  + 
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    Y  LI+G  K G  D A +   EM    L      ++ LL    R   M EA 
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 586

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---------------- 164
            +  +M  +G+ PDIV++++LI  + + G    AL   +EMK                  
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 646

Query: 165 ------------------GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
                             GL PD + Y  IIN YC  G   +AL + +EM   G + + V
Sbjct: 647 LRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAV 706

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TYN ++ GLC+   + +A+   +EML     P   T   L+  + +    +K L + + +
Sbjct: 707 TYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKL 766

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               ++  +  YNTLI  FC++G   KA  +  +M+ R IS + ++Y  LI GYC+  HV
Sbjct: 767 VASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHV 826

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE----GVDPDSIS 382
            +A + + +M   GI P + + NT++ G   +G   +  E   K+VSE    G+ P++ +
Sbjct: 827 EKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAAT 886

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y+ L++G+ R  N  K   L  +M  +G VP + TYNV+++ + + G+M ++  +L  ++
Sbjct: 887 YDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLL 946

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            KG  P+  TY  L  G ++ +   E     D  L+R +
Sbjct: 947 TKGRIPNSFTYDILTCGWLNLSYEPEI----DRSLKRSY 981



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 229/419 (54%), Gaps = 8/419 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  ++D A+  + +M  KG+ PD V Y +LI+ Y +EG    A  ++  M  K 
Sbjct: 572 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 631

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V  YN+LI GL + G+ D  + V   M+++GL+PD  TYNT++   C K    +A 
Sbjct: 632 IRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDAL 690

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  EM   G+ P+ V+++ LIG   + G +++A     EM     VP  + +  ++  Y
Sbjct: 691 DILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY 750

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R+    + L++ ++++  G  + +  YNT++   CR  M  +A  + +EM++RG+  D 
Sbjct: 751 SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADL 810

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG----EMEKANK 296
            T+  LI G+C   ++ KAL  +  M    I P+I TYNTL+ G    G     ME+  K
Sbjct: 811 VTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEK 870

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L ++M  R + PN  +Y IL++GY  +G+  +   L  EM+ KG  PTL + N +I  Y 
Sbjct: 871 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 930

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR---EENMDKAFALVSKMENQGLV 412
           +SG   +A E L+ ++++G  P+S +Y+ L  G++    E  +D++     ++E + L+
Sbjct: 931 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLL 989



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 248/495 (50%), Gaps = 33/495 (6%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           +  +A      M   G+ P    +NTL+  +   G + +   + + M   G+ P VF+ N
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVN 133

Query: 70  SLINGLCKKGRCD------RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            L++ LCK G  D      R  +V+D         D  TYNT++   C+K  + +   + 
Sbjct: 134 VLVHSLCKVGDLDLALGYLRNNDVVD--------IDNVTYNTVIWGFCQKGLVDQGFGLL 185

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +RG+  D ++ + L+  + R G +  A      +   G+  D +    +I+GYC  
Sbjct: 186 SEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEA 245

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE---------- 233
           G + +A ++ +        +D+VTYNT+L   C+   LT A+ LFNE+L           
Sbjct: 246 GLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKN 305

Query: 234 ---------RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
                    + + P   T+TTLI  +CK   + ++ +L+  M    I PD+VT ++++ G
Sbjct: 306 NDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYG 365

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           FC+ G++ +A  L+ +M    + PN++SY  +IN     G V EAF L  +MV +GI   
Sbjct: 366 FCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFD 425

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           +V+C T++ G  + G   +A+E    ++   + P+ ++Y+ L++G+ +   M+ A  ++ 
Sbjct: 426 IVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQ 485

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           KME + + P+VIT++ I+ G+ ++G +  +  +L  M+++ + P+   Y  LI+G+    
Sbjct: 486 KMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAG 545

Query: 465 NLKEAFRFHDEMLQR 479
               A  F  EM  R
Sbjct: 546 EQDVADDFCKEMKSR 560



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 236/469 (50%), Gaps = 21/469 (4%)

Query: 35  TLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
           TLI  Y        A    + M   GL P +  +N+L+      G   + K +  +ML  
Sbjct: 64  TLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFC 123

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G+ PD  + N L+   C+  ++  A       +   V  D V+++T+I  F + G +D+ 
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYL--RNNDVVDIDNVTYNTVIWGFCQKGLVDQG 181

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
                EM   GL  D++   I++ GYCR G V  A  +   +++ G   DV+  NT+++G
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF----------- 263
            C A ++++A +L        V  D  T+ TL+   CK G++ +A +LF           
Sbjct: 242 YCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDED 301

Query: 264 -----DIMTQKSIK---PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
                D++TQ  IK   P +VTY TLI  +CK   +E+++ L+  MI   I P+ ++   
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSS 361

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           ++ G+C  G +TEA  L+ EM   G+ P  VS  TII    +SG   +A    S+MV  G
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG 421

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           +  D ++  T+++G  +     +A  +   +    L P+ +TY+ +L G+C+ G+M  +E
Sbjct: 422 ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE 481

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L+L +M ++ + P+  T++++ING+  +  L +A     EM+QR  +P+
Sbjct: 482 LVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 530


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 266/482 (55%)

Query: 3   NALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK 62
           +A+ +  + +    F  ++E  G+  +  T N +IN +CR      A+ ++  +   G +
Sbjct: 96  SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P   T+N+LI GL  +G+   A  ++D M++ G  PD  TYN+++   CR  + S A ++
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             +M  R V  D+ ++ST+I    R+G +D A+  F+EM++ G+    V Y  ++ G C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G   +   +  +M+ +  V +V+T+N +L+   +   L EA++L+ EM+ RG+ P+  T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           + TL+ G+C    +++A N+ D+M +    PDIVT+ +LI G+C V  ++   K++ ++ 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
            R +  N ++Y IL+ G+C  G +  A  L+ EMV  G+ P +++   ++ G C +G   
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           KA E    +    +D   + Y T+I G  +   ++ A+ L   +  +G+ P+V+TY V++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +G C++G + ++ ++L +M E G  P+  TY TLI  H+   +L  + +  +EM   GF 
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 483 PD 484
            D
Sbjct: 576 AD 577



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 260/462 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K   A   L ++ + G  PDT T+NTLI     EG + EA  L++ M   G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYNS++NG+C+ G    A ++L +M +  +  D  TY+T++   CR   +  A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+   +V++++L+    + G+ +   +  ++M S  +VP+ + + ++++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA ++  EM+ +G   +++TYNT+++G C    L+EA+++ + M+     PD 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFT+LI G+C    ++  + +F  ++++ +  + VTY+ L+ GFC+ G+++ A +L+ +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++YGIL++G C  G + +A  ++ ++    +   +V   TII+G C+ G 
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      +  +GV P+ ++Y  +I+G  ++ ++ +A  L+ KME  G  P+  TYN 
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           ++    R G +  S  ++  M   G + D S+   +I+  +S
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 112/218 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   ++D        + ++G+  + VTY+ L+  +C+ G ++ A +L   M   G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY  L++GLC  G+ ++A E+ +++ +  +      Y T++   C+   + +A 
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +FC +  +GV P++++++ +I    + G L  A +  R+M+  G  P++  Y  +I  +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
            R+G +  + K+ +EM   G   D  +   +++ L  A
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 160/499 (32%), Positives = 268/499 (53%), Gaps = 16/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+   I    + L EME KG+ P  VTY  +I+   R+G L +   L+  M  +G
Sbjct: 122 LIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARG 181

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V  YN++IN LCK     +A ++L++M++   +PD  T+NT++   CR+ ++ EA 
Sbjct: 182 LSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREAL 241

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E  RRG+ P+ +S++ LI  F   G+   A     EM   G  PD +    +I+G 
Sbjct: 242 KLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGL 301

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G V +AL +R++M E+  + D   YN +++GLC+ +ML+ A +L  EMLE+ V PD 
Sbjct: 302 VVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDK 361

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +TTLI G  +   ++ A  +F+ M +K+  PDIV YN +I G+CK G M++A    + 
Sbjct: 362 FIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSS 420

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P+  +Y  L++GY   G ++ + RL  +M+ +  KP + +  ++I GYC  GD
Sbjct: 421 MRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGD 480

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A++  +KM SEG+ P+ + Y  LI    +++ + +A A    M      P+  T + 
Sbjct: 481 TYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHY 540

Query: 421 ILTGF--CRQG----------RMHDSELIL--WR-MIEKGLNPDRSTYTTLINGHVSQNN 465
           ++ G   CR G          + H+   +L  +R +I  GL+P  S Y  +I      N 
Sbjct: 541 LVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNM 600

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           L +A    D+M  +G +PD
Sbjct: 601 LGKAMDLKDKMSNKGCLPD 619



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 236/458 (51%), Gaps = 1/458 (0%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D  +   ++   C EG +EE   L+ +  G+G  PG   YN LI+G C++G   R   +L
Sbjct: 80  DDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLL 139

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            EM   G+ P   TY  ++    RK ++++ E +  EM  RG++P++  ++T+I    + 
Sbjct: 140 GEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKC 199

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
               +A     +M  +   PD V +  +I G+CR G V EALK+  E + +G   + ++Y
Sbjct: 200 RSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSY 259

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
             +++G C       A DL  EM+ RG  PD  T   LIHG    G +N AL + + M +
Sbjct: 260 TPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAE 319

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           + + PD   YN LI G CK   +  A  L  +M+ +K+ P+   Y  LI+G+     +++
Sbjct: 320 RQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSD 379

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A R  +E + +   P +V+ N +IKGYC+ G   +A   +S M   G  PD  +Y TL++
Sbjct: 380 A-RKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVD 438

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ ++ ++  +  L+  M  +   P++ TY  ++ G+C  G  + +E +  +M  +GL P
Sbjct: 439 GYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFP 498

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +   YT LI     ++ + +A  + + ML     P+DA
Sbjct: 499 NVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDA 536



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 212/403 (52%), Gaps = 1/403 (0%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           +RA+ +  EML      D  +   ++   C +  + E   +       G  P  V ++ L
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  + R G + R L+   EM++ G++P  V Y  II+   R G + +   +  EM  +G 
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             +V  YNT++N LC+ +  ++A D+ N+M++    PD  TF T+I G C++G++ +AL 
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L     ++ ++P+ ++Y  LI GFC  GE   A+ L  +M+ R  +P+ I+ G LI+G  
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G V +A  +  +M  + + P     N +I G C+    S A   L +M+ + V PD  
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            Y TLI+GFVR + +  A  +   ME +   PD++ YNV++ G+C+ G M ++   +  M
Sbjct: 363 IYTTLIDGFVRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAVTCMSSM 421

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            + G  PD  TYTTL++G+  + ++  + R   +M++R   P+
Sbjct: 422 RKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPN 464



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 230/513 (44%), Gaps = 68/513 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCK      A   L +M +    PD VT+NT+I  +CREG + EA +L+     +G
Sbjct: 192 VINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRG 251

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTAT------------------ 102
           L+P   +Y  LI+G C +G    A ++L EM+  G +PD  T                  
Sbjct: 252 LEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDAL 311

Query: 103 -----------------YNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                            YN L+   C+K  +S A+ +  EM  + V PD   ++TLI  F
Sbjct: 312 IVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGF 371

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R+ +L  A   F  M+     PD V Y ++I GYC+ G + EA+     M + GC+ D 
Sbjct: 372 VRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDE 430

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TY T+++G  +   ++ +  L  +M++R   P+ +T+ +LI G+C  G+   A +LF  
Sbjct: 431 FTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAK 490

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  + + P++V Y  LI    K  ++ +A   +  M+     PN  +   L+NG      
Sbjct: 491 MQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNG------ 544

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE------FLSKMVSEGVDPD 379
                              LV+C   +    RS D  +A E          ++S+G+DP 
Sbjct: 545 -------------------LVNCRHGMVNSNRS-DTKQAHEKSALLDVFRGLISDGLDPR 584

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN +I    R   + KA  L  KM N+G +PD IT+  +L GF   G        L 
Sbjct: 585 ISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALP 644

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
              ++      + Y  L N HV+ + + E  R 
Sbjct: 645 NEFQQDEFEIITKYMALFNQHVTSSVVGEVSRI 677


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 266/482 (55%)

Query: 3   NALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK 62
           +A+ +  + +    F  ++E  G+  +  T N +IN +CR      A+ ++  +   G +
Sbjct: 96  SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P   T+N+LI GL  +G+   A  ++D M++ G  PD  TYN+++   CR  + S A ++
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             +M  R V  D+ ++ST+I    R+G +D A+  F+EM++ G+    V Y  ++ G C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G   +   +  +M+ +  V +V+T+N +L+   +   L EA++L+ EM+ RG+ P+  T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           + TL+ G+C    +++A N+ D+M +    PDIVT+ +LI G+C V  ++   K++ ++ 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
            R +  N ++Y IL+ G+C  G +  A  L+ EMV  G+ P +++   ++ G C +G   
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           KA E    +    +D   + Y T+I G  +   ++ A+ L   +  +G+ P+V+TY V++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +G C++G + ++ ++L +M E G  P+  TY TLI  H+   +L  + +  +EM   GF 
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 483 PD 484
            D
Sbjct: 576 AD 577



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 260/462 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K   A   L ++ + G  PDT T+NTLI     EG + EA  L++ M   G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYNS++NG+C+ G    A ++L +M +  +  D  TY+T++   CR   +  A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+   +V++++L+    + G+ +   +  ++M S  +VP+ + + ++++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA ++  EM+ +G   +++TYNT+++G C    L+EA+++ + M+     PD 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFT+LI G+C    ++  + +F  ++++ +  + VTY+ L+ GFC+ G+++ A +L+ +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++YGIL++G C  G + +A  ++ ++    +   +V   TII+G C+ G 
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      +  +GV P+ ++Y  +I+G  ++ ++ +A  L+ KME  G  P+  TYN 
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           ++    R G +  S  ++  M   G + D S+   +I+  +S
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 117/232 (50%), Gaps = 4/232 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   ++D        + ++G+  + VTY+ L+  +C+ G ++ A +L   M   G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY  L++GLC  G+ ++A E+ +++ +  +      Y T++   C+   + +A 
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +FC +  +GV P++++++ +I    + G L  A +  R+M+  G  P++  Y  +I  +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
            R+G +  + K+ +EM   G   D  +   +++ L       E D  F +ML
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG----ELDKSFLDML 601


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 254/477 (53%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D+K +    F   + QK   P    +  ++ +  +         L   M   G+   +  
Sbjct: 50  DNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            + LIN   + G+   +  VL ++L+MG  P+  T  TL+   C K  + +A +   ++ 
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G   + VS+ TLI    + GQ   AL   R +    + P+ V+Y  II+  C+   V 
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EA  +  EM+ KG   DVVTYN +++G C    + +A DLFN+M+   + P+ YTF  L+
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G CK+  + +A N+  +M ++ IKPD+ TYN+L+D +C V E+ KA  ++  +  R ++
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN 349

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN  SY I+I+G+C +  V EA  L+ EM    I P +V+ N++I G C+ G  S A + 
Sbjct: 350 PNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKL 409

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           + +M   GV  D I+YN++++   +   +DKA AL++KM+++G+ PD+ TY  ++ G C+
Sbjct: 410 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GR+ D+ ++   ++ KG   D + YT +I G  S     E+     +M + G +P+
Sbjct: 470 NGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPN 526



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 256/462 (55%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME  G+  D V  + LIN + + G    +F ++  +   G +P V T  +LI GLC KG
Sbjct: 97  QMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKG 156

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A +  D+++ +G   +  +Y TL+   C+    S A ++   +  + V P++V ++
Sbjct: 157 QIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYN 216

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    +   ++ A   + EM S G+ PD V Y  +I+G+C  G + +A  + ++M+ +
Sbjct: 217 TIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFE 276

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               +V T+N +++G C+ + L EA ++   M+++G+ PD +T+ +L+  +C    +NKA
Sbjct: 277 NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKA 336

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            ++F+ ++Q+ + P+I +Y+ +I GFCK+ ++++A  L+ +M    I P+ ++Y  LI+G
Sbjct: 337 KHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDG 396

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G ++ A +L  EM  +G+    ++ N+I+   C++    KA   L+KM  EG+ PD
Sbjct: 397 LCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +Y TL++G  +   ++ A  +   +  +G + DV  Y  ++ GFC  G   +S  +L 
Sbjct: 457 ICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLS 516

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +M E G  P+  TY  +I     ++   +A +   EM+ RG 
Sbjct: 517 KMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 240/429 (55%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           L ++ + G  P+ +T  TLI   C +G + +A Q  + +   G      +Y +LINGLCK
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
            G+   A ++L  +    + P+   YNT++   C+ + ++EA +++ EM  +G++PD+V+
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ LI  F   G++  A   F +M    + P+   + I+++G+C+   + EA  +   M+
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           ++G   DV TYN++++  C  K + +A  +FN + +RGV P+ ++++ +IHG CK   ++
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A+NLF  M   +I PD+VTYN+LIDG CK+G++  A KL  +M  R +  + I+Y  ++
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +  C    V +A  L  +M  +GI+P + +  T++ G C++G    A      ++ +G  
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
            D   Y  +I GF      D++  L+SKME  G +P+ +TY +I+     +     +E +
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKL 549

Query: 438 LWRMIEKGL 446
           L  MI +GL
Sbjct: 550 LREMITRGL 558



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 199/341 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++++CK   ++ A     EM  KG+ PD VTYN LI+ +C  G +++A  L N M  + 
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+T+N L++G CK+ R   AK VL  M++ G+ PD  TYN+L+   C  + +++A+
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  +S+RGV P+I S+S +I  F +  ++D A+  F+EM    ++PD V Y  +I+G 
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  ALK+ DEM ++G   D +TYN+IL+ LC+   + +A  L  +M + G+ PD 
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDI 457

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTL+ G CK+G +  A  +F+ +  K    D+  Y  +I GFC  G  +++  L + 
Sbjct: 458 CTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSK 517

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           M      PN ++Y I+I          +A +L  EM+ +G+
Sbjct: 518 MEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 215/376 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +  +A   L  ++ K V P+ V YNT+I++ C+   + EAF L + M  KG
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LI+G C  G+   A ++ ++M+   ++P+  T+N L+   C++  + EA+
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M ++G+ PD+ ++++L+  +    ++++A   F  +   G+ P+   Y+I+I+G+
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA+ +  EM     + DVVTYN++++GLC+   ++ A  L +EM +RGV  D 
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK 422

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++   CK+  ++KA+ L   M  + I+PDI TY TL+DG CK G +E A  ++ D
Sbjct: 423 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFED 482

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ +    +   Y  +I G+CS G   E+  L  +M   G  P  V+   II       +
Sbjct: 483 LLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDE 542

Query: 361 ASKADEFLSKMVSEGV 376
             KA++ L +M++ G+
Sbjct: 543 NDKAEKLLREMITRGL 558



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 219/411 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +I  A  F  ++   G + + V+Y TLIN  C+ G    A QL+  + GK 
Sbjct: 148 LIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKL 207

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V  YN++I+ +CK    + A ++  EM+  G+SPD  TYN L+   C    M +A 
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M    + P++ +F+ L+  F +  +L  A      M   G+ PD   Y  +++ Y
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V +A  + + + ++G   ++ +Y+ +++G C+ K + EA +LF EM    + PD 
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDV 387

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G CK G ++ AL L D M  + +  D +TYN+++D  CK  +++KA  L   
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 447

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I P+  +Y  L++G C  G + +A  ++ +++ KG    +     +I+G+C  G 
Sbjct: 448 MKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGL 507

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
             ++ + LSKM   G  P++++Y  +I     ++  DKA  L+ +M  +GL
Sbjct: 508 FDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 134/237 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   +++ AK     + Q+GV P+  +Y+ +I+ +C+   ++EA  L   M    
Sbjct: 323 LMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNN 382

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYNSLI+GLCK G+   A +++DEM   G+  D  TYN++L   C+   + +A 
Sbjct: 383 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAI 442

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G+ PDI +++TL+    +NG+L+ A + F ++   G + D  +YT +I G+
Sbjct: 443 ALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGF 502

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           C +G   E+L +  +M E GC+ + VTY  I+  L       +A+ L  EM+ RG+F
Sbjct: 503 CSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 257/487 (52%), Gaps = 2/487 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N  CK  K D +  FL  M  +G  PD +    LI  +     +E+A Q+M  +   G 
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG- 142

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP VF YN++I+G CK  R D A +VLD M + G  PD  TYN L+   C +  +  A  
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  ++ +    P +++++ LI      G +D A+    EM S GL PD   Y +++NG C
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G +  A +    + + GCV  V TYN +L  L         + L ++ML +G  P+  
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI 322

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T++TLI   C+DG +++A N+  +M +K++ PD  +Y+ LI   C+ G+++ A +   DM
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           IS    P+ +SY  ++   C  G+  EA  ++ ++   G  P   S NT+      SGD 
Sbjct: 383 ISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK 442

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM-ENQGLVPDVITYNV 420
            +A   + +M+S G+DPD I+YN+LI+   R+  +D+A  L+  M E++   P VI+YN 
Sbjct: 443 IRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNT 502

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C+  R+ D+  +L  M+ +G  P+ +TYT LI G        +A    + ++   
Sbjct: 503 VLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMD 562

Query: 481 FVPDDAF 487
            + +D+F
Sbjct: 563 AISEDSF 569



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 204/391 (52%), Gaps = 1/391 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  ++D A   L  M+++G  PD VTYN LI  +C  G L+ A ++M+ +    
Sbjct: 152 VISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDN 211

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY  LI     +G  D A ++LDEML  GL PD  TYN ++   C++  +  A 
Sbjct: 212 CKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAF 271

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E    +S+ G    + +++ L+      G+ +       +M   G  P+ + Y+ +I   
Sbjct: 272 EFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITAL 331

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G + EA  +   M EK    D  +Y+ +++ LCR   +  A +  ++M+  G  PD 
Sbjct: 332 CRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDI 391

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ +++   CK+GN ++ALN+F+ + +    P+  +YNTL       G+  +A  +  +
Sbjct: 392 LSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILE 451

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV-GKGIKPTLVSCNTIIKGYCRSG 359
           M+S  I P+ I+Y  LI+  C  G V +A  L  +M   +  +PT++S NT++ G C+  
Sbjct: 452 MLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQ 511

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGF 390
               A E L+ MV+EG  P+  +Y  LI G 
Sbjct: 512 RIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 34/276 (12%)

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV-------------------------- 276
           F   ++  CK    +++L     M  +  KPD++                          
Sbjct: 80  FMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILE 139

Query: 277 --------TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                    YN +I GFCK   ++ A+K+   M  R   P+ ++Y ILI  +C  G +  
Sbjct: 140 KHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDL 199

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A R+  +++    KPT+++   +I+     G   +A + L +M+S G+ PD  +YN ++N
Sbjct: 200 ALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVN 259

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  +E  +D+AF  +S++   G V  V TYN++L     +G+    E ++  M+ KG  P
Sbjct: 260 GMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEP 319

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  TY+TLI        + EA      M ++   PD
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPD 355


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 247/464 (53%), Gaps = 6/464 (1%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           +GV P+  TY T +   C    ++ A+  +  +  +G     + +N++I+G C  G+  +
Sbjct: 242 EGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A EV D M + G  PD  +Y+ L+   C++ ++     +  EM+R G+ P++VS+S+L+ 
Sbjct: 302 AIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
              R G+++ A   F+ +K  G   D+++Y+I+++G C++  +     + ++M+    V 
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D   Y++++   CR + L EA ++F  M+  G+ P+  T T L+HG   +G + +A    
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFL 481

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW---ADMISRKISPNYISYGILINGY 320
           D + Q  + P + TY  +I G CKV    K N +W   ADMI R   P+ + Y I+I+G+
Sbjct: 482 DKVRQFGVVPSLCTYRVIIHGLCKV---NKPNDMWGIFADMIKRGYVPDTVLYSIIIDGF 538

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
                + EAFRL+Y+MV +G KP + +  ++I G C      +       M+ EG+ PD 
Sbjct: 539 VKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDR 598

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           I Y +LI  + +  NM  A  +  +ME +GL  D   Y  ++ GF +   M  ++L +  
Sbjct: 599 ILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEE 658

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M+ KGL P   TYT LI G+    + K+A   ++ MLQ G  PD
Sbjct: 659 MMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 216/414 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C D ++  A      M++ G  PD  +Y+ L++  C++G +   + ++  M+  G
Sbjct: 289 VIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG 348

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + +Y+SL++GLC+ GR + A E+   +   G   D   Y+ +L   C+  ++    
Sbjct: 349 ITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICY 408

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M      PD  ++S+LI  + R+ QL  AL  F  M S G+ P+ V  TI+++G+
Sbjct: 409 DLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGF 468

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + EA    D++ + G V  + TY  I++GLC+     +   +F +M++RG  PD 
Sbjct: 469 SNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDT 528

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++ +I G  K  ++ +A  L+  M  +  KP+I TY +LI+G C   ++ +   L+  
Sbjct: 529 VLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKH 588

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI   ++P+ I Y  LI  YC   ++  A  ++ EM  +G+         +I G+ +   
Sbjct: 589 MIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLA 648

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
              A  F+ +M+++G+ P  ++Y  LI G+ +  +  KA A+ + M   G+ PD
Sbjct: 649 MDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 208/380 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK   + +    L EM + G+ P+ V+Y++L++  CR G +E AF+L   +  +G
Sbjct: 324 LVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQG 383

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K     Y+ +++G C+    +   ++ ++M+     PD   Y++L+   CR   + EA 
Sbjct: 384 FKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEAL 443

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M   G+ P++V+ + L+  FS  G +  A ++  +++  G+VP    Y +II+G 
Sbjct: 444 EVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGL 503

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+     +   +  +M+++G V D V Y+ I++G  +A  L EA  L+ +M++ G  P+ 
Sbjct: 504 CKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNI 563

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+T+LI+G C D  + + + LF  M  + + PD + Y +LI  +CK   M+ A +++ +
Sbjct: 564 FTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFRE 623

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  +S +   Y  LI G+  +  +  A     EM+ KG+ PT+V+   +I GY + GD
Sbjct: 624 METEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGD 683

Query: 361 ASKADEFLSKMVSEGVDPDS 380
             KA    + M+  G+ PD+
Sbjct: 684 EKKAMAMYNSMLQAGIAPDA 703



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 201/418 (48%), Gaps = 37/418 (8%)

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR---------- 153
           N LL        +  A  +F +M   G +P++ S+S L+ +++   +L            
Sbjct: 180 NFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEM 239

Query: 154 -----------------ALMYFREMKSA----------GLVPDNVLYTIIINGYCRNGFV 186
                             L + +++KSA          G   +N  +  +I+G+C +G V
Sbjct: 240 EVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQV 299

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A+++ D M + G V DV +Y+ +++GLC+   +     +  EM   G+ P+  ++++L
Sbjct: 300 HKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSL 359

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           +HG C+ G +  A  LF  +  +  K D + Y+ ++ G C+  ++E    LW DM+    
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+  +Y  LI  YC    + EA  ++  MV  GI P +V+C  ++ G+   G   +A  
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFL 479

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
           FL K+   GV P   +Y  +I+G  +    +  + + + M  +G VPD + Y++I+ GF 
Sbjct: 480 FLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFV 539

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   + ++  + ++M+++G  P+  TYT+LING    + L E       M+  G  PD
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPD 597



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 2/225 (0%)

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L   +  K +  ++   N L+    +  ++  A  L+ DM S   SPN  SY +L++ Y 
Sbjct: 163 LVTYVEAKKVGVELQVCNFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYT 222

Query: 322 SMGHVTEAFRLWYEMVG--KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
               +     L        +G++P   +  T + G C +     A  FL  +   G   +
Sbjct: 223 HGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCN 282

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +  +N +I+GF  +  + KA  +   M+  G VPDV +Y++++ G C+QG +     +L 
Sbjct: 283 NYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLV 342

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   G+ P+  +Y++L++G      ++ AF     +  +GF  D
Sbjct: 343 EMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHD 387



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 82/176 (46%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K   +  A     +M  +G  P+  TY +LIN  C +  L E   L   M G+G
Sbjct: 534 IIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEG 593

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    Y SLI   CK+     A E+  EM   GLS D+  Y  L+    +   M  A+
Sbjct: 594 LAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQ 653

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
               EM  +G+ P +V+++ LI  + + G   +A+  +  M  AG+ PD  L  I+
Sbjct: 654 LFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAKLSCIL 709


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 258/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+    +M  KGV PD  TYN LI+ Y   G  +E  +++  MS  G
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG 303

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TY SL+N LC  GRC  A+   D M++ G+ P+ A Y  L+     K  +SE  
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M   G++PD   F+ +   +++   +D A+  F +MK  GL PD V +  +I+  
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDAL 423

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A+   ++M+ +G   ++  +N+++ GLC      +A + + EML +G+ PD 
Sbjct: 424 CKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDV 483

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F T++   C  G + KA  L D+M +   +PD+++Y TLI G C VG +++A K    
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDV 543

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+  +Y  L++GYC  G + +A+ ++ EM+  GI P +V+ +TI+ G   +  
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A E    M++ G   +   YN ++NG  +   +D+AF L   + ++    ++ T+N+
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  D+  +   +   GL PD  TY  +    + +  L+E       M + G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723

Query: 481 FVPD 484
             P+
Sbjct: 724 TTPN 727



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 253/484 (52%), Gaps = 3/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEM---EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++   C + + + A   L  M   + +   P+ V+Y T+IN +  EG +++A+ L   M 
Sbjct: 171 LLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMM 230

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            +G++P V TY ++I+GLCK    DRA+ V  +M+  G+ PD  TYN L+          
Sbjct: 231 DRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWK 290

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           E   +  EMS  G+ PD  ++ +L+     NG+   A  +F  M   G+ P+  +Y I+I
Sbjct: 291 EVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILI 350

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +GY   G + E   + + M+E G   D   +N I     +  M+ EA  +FN+M ++G+ 
Sbjct: 351 HGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLS 410

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD   F  LI   CK G ++ A+  F+ M  + + P+I  +N+L+ G C V + EKA + 
Sbjct: 411 PDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEF 470

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           + +M+++ I P+ + +  ++   C+ G V +A RL   M   G +P ++S  T+I G+C 
Sbjct: 471 YFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCL 530

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A + L  M+S G+ PD  +YNTL++G+ R   +D A+ +  +M   G+ P V+T
Sbjct: 531 VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVT 590

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y+ IL G     R  +++ +   MI  G   +   Y  ++NG    N + EAF+    + 
Sbjct: 591 YSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLC 650

Query: 478 QRGF 481
            + F
Sbjct: 651 SKDF 654



 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/464 (32%), Positives = 239/464 (51%), Gaps = 4/464 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V PD  TY+ LI  +CR G LE  F     +   G +      N L+ GLC   R   A 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 86  EVL-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR---RGVAPDIVSFSTL 141
           ++L   M ++G +PD  +YNTLL   C ++   EA E+   M+    R   P++VS++T+
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F   GQ+D+A   F EM   G+ P+ V YT +I+G C+   V  A  +  +M++KG 
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             D  TYN +++G        E   +  EM   G+ PD YT+ +L++  C +G   +A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
            FD M +K IKP++  Y  LI G+   G + + + L   M+   +SP++  + I+   Y 
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
               + EA  ++ +M  +G+ P +V+   +I   C+ G    A    ++M++EGV P+  
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            +N+L+ G    +  +KA     +M NQG+ PDV+ +N IL   C +G++  ++ ++  M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
              G  PD  +YTTLI GH     + EA +  D ML  G  PD+
Sbjct: 510 ERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDE 553



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 237/484 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N    + ++D A     EM  +G+ P+ VTY T+I+  C+   ++ A  +   M  KG
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TYN LI+G    G+      +L+EM   GL PD  TY +LL   C      EA 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M R+G+ P++  +  LI  ++  G L         M   GL PD+ ++ II   Y
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + EA+ + ++M ++G   DVV +  +++ LC+   + +A   FN+M+  GV P+ 
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + F +L++G C      KA   +  M  + I+PD+V +NT++   C  G++ KA +L   
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P+ ISY  LI G+C +G + EA +    M+  G+KP   + NT++ GYCR+G 
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M+  G+ P  ++Y+T+++G        +A  L   M   G   ++  YN+
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL G  +   + ++  +   +  K    + +T+  +I         ++A      +   G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 481 FVPD 484
            VPD
Sbjct: 689 LVPD 692



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 226/455 (49%), Gaps = 49/455 (10%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVE----SCRKENMSEAE---EIFCEMSRR---GV 131
           D A ++ D +L          +N LL      S R+ + +E+E    +F  M R     V
Sbjct: 31  DDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            PD+ ++S LIG F R G+L+     F  +  +G   +N++   ++ G C    + EA+ 
Sbjct: 91  TPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMD 150

Query: 192 -MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE---RGVFPDFYTFTTLI 247
            +   M E GC  DVV+YNT+L G C  K   EA +L + M +   R   P+  ++ T+I
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVI 210

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +G   +G ++KA NLF  M  + I+P++VTY T+IDG CK   +++A  ++  MI + + 
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEM------------------------------- 336
           P+  +Y  LI+GY S+G   E  R+  EM                               
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330

Query: 337 ----VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
               + KGIKP +     +I GY   G  S+  + L+ MV  G+ PD   +N +   + +
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +  +D+A  + +KM+ QGL PDV+ +  ++   C+ GR+ D+ L   +M+ +G+ P+   
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           + +L+ G  + +  ++A  F+ EML +G  PD  F
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVF 485


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 264/485 (54%), Gaps = 7/485 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCKD  +  A+  + ++ + G+ PDT TY ++I  YCR   L+ AF++ N M  +G
Sbjct: 234 VINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEG 293

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TY++LINGLC  GR + A + + EM + G+ P   T+   +V  C    + +A 
Sbjct: 294 CEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAW 353

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ-LDR-ALMYFREMKSAGLVPDNVLYTIIIN 178
           +IF +M ++G  P++ ++++LI     +GQ + R A+  F  M   G+VP+ V Y  ++N
Sbjct: 354 KIFIDMKKKGCKPNVYTYTSLI-----SGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMN 408

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
               N  +  AL + + M + GC+ +  +YN ++ G C      +A  +   ML+    P
Sbjct: 409 VLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTP 468

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
              T+  +I G+C  G+ + A+ + ++M     +PD  +Y  LI GFCK+ +ME A+ ++
Sbjct: 469 TLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMF 528

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M+ R + PN ++Y  LI+GYC    +  A R+   M   G +P + + N +I G  + 
Sbjct: 529 NEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQ 588

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
            + S A+E    M+ E + PD ++Y+T+ING      +  A  + +KM   G +P++ TY
Sbjct: 589 NNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTY 648

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++    ++GR+ ++E +   + ++GL PD  TY  +I   V    +  AF F  EM+ 
Sbjct: 649 SSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMIN 708

Query: 479 RGFVP 483
            G  P
Sbjct: 709 AGCQP 713



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 245/463 (52%), Gaps = 3/463 (0%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           ++G+ P+ + YN++INA C++G + +A  ++N +   G+KP  FTY S+I G C+    D
Sbjct: 221 REGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLD 280

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A E+ + M + G  P+ ATY+TL+   C    ++EA +   EM+R GV P + +F+  I
Sbjct: 281 SAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPI 340

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
                 G+++ A   F +MK  G  P+   YT +I+G         A+ +   M   G V
Sbjct: 341 VALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVV 397

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            + VTYN ++N L     +  A  +FN M + G  P+  ++  LI G+C  G+  KA+++
Sbjct: 398 PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSM 457

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
              M +    P +VTYN +I G+C  G+ + A ++   M +    P+  SY  LI+G+C 
Sbjct: 458 LTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCK 517

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +  +  A  ++ EM+ +G+ P  V+   +I GYC+      A   L +M   G  P+  +
Sbjct: 518 ISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQT 577

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN LI+G  ++ N   A  L   M  + + PDV+TY+ ++ G C  G +  +  +  +M+
Sbjct: 578 YNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMV 637

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           + G  P+  TY++LI     +  ++EA     E+ ++G +PD+
Sbjct: 638 KHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDE 680



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 251/484 (51%), Gaps = 38/484 (7%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFT---------------------------- 67
           +I +   +  + +A   ++  S +G K G+FT                            
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 68  -------YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                  YNS+IN LCK G    A+ +++++ + G+ PDT TY ++++  CR  ++  A 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF  M   G  P+  ++STLI     +G+++ AL +  EM   G++P    +T  I   
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A K+  +M +KGC  +V TY ++++G   ++M   A  LF+ M   GV P+ 
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM---AIGLFHRMSRDGVVPNT 400

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L++   ++  ++ AL +F++M +    P+  +YN LI G+C +G+ EKA  +  +
Sbjct: 401 VTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN 460

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+  + +P  ++Y I+I GYC  G    A R+   M   G +P   S   +I G+C+   
Sbjct: 461 MLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISK 520

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A    ++M+  G+ P+ ++Y  LI+G+ ++E +D A  ++ +M+  G  P+V TYNV
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  +Q     +E +   M+E+ ++PD  TY+T+ING  +   +  A    ++M++ G
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640

Query: 481 FVPD 484
            +P+
Sbjct: 641 CLPN 644



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 232/481 (48%), Gaps = 22/481 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L ++ +IDSA +    M + G  P+T +YN LI  YC  G  E+A  ++ +M    
Sbjct: 406 LMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGR 465

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN +I G C  G  D A  VL+ M   G  PD  +Y  L+   C+   M  A 
Sbjct: 466 PTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELAS 525

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  RG+ P+ V+++ LI  + ++ +LD A      MK +G  P+   Y ++I+G 
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL 585

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      A ++   MLE+    DVVTY+T++NGLC    +  A ++FN+M++ G  P+ 
Sbjct: 586 TKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNL 645

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI    ++G + +A  +F  + ++ + PD VTY  +I+     G++++A     +
Sbjct: 646 HTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGE 705

Query: 301 MISRKISPNYISYGILINGY---------CSMGHVTEAFRLWYEMVGKGIKPTLVS---- 347
           MI+    P   +Y +LI G           ++ +         +++ K +   L S    
Sbjct: 706 MINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAE 765

Query: 348 ---------CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
                     + ++    RSG   +A+     MVS+   P+  +Y   +   +R   +D 
Sbjct: 766 LDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDL 825

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  +   M +Q     +  Y  ++   C+  R  ++  +  +M+ + LN D   +T LIN
Sbjct: 826 AMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILIN 885

Query: 459 G 459
           G
Sbjct: 886 G 886



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 192/395 (48%), Gaps = 21/395 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  K++ A     EM  +G+ P+ VTY  LI+ YC++  L+ A +++  M   G
Sbjct: 511 LISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSG 570

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN LI+GL K+     A+E+   ML+  +SPD  TY+T++   C    +  A 
Sbjct: 571 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLAL 630

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F +M + G  P++ ++S+LI    + G+++ A   F E+K  GL+PD V Y  +I   
Sbjct: 631 EMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVC 690

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G V  A     EM+  GC   + TY+ ++ GL       + + ++++++     P+ 
Sbjct: 691 VMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL-------QNEMVYHKLV---ALPNA 740

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI----VTYNTLIDGFCKVGEMEKANK 296
            + +T       D  +NK  ++  +++ K  + D       Y+ L+    + G   +AN 
Sbjct: 741 ASTSTF-----DDQIINK--DVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANN 793

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+  M+S+   PN  +Y   +        V  A  ++  M  +  +  L     +I   C
Sbjct: 794 LYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLC 853

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +     +A     KM+S  ++ D I +  LING +
Sbjct: 854 QLHRRKEARFVFEKMLSRALNADEIVWTILINGLL 888



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 127/330 (38%), Gaps = 57/330 (17%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K +    A+     M ++ + PD VTY+T+IN  C  G +  A ++ N M   G
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY+SLI  L ++GR + A+E+  E+ + GL PD  TY  ++        +  A 
Sbjct: 641 CLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700

Query: 121 EIFCEMSRRGVAP----------------------------------------DIVS--- 137
           +   EM   G  P                                        D++S   
Sbjct: 701 DFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLS 760

Query: 138 --------------FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
                         +  L+   SR+G+   A   +R M S    P+   Y   +    R 
Sbjct: 761 SKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRA 820

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
             V  A+ +   M ++ C + +  Y  ++  LC+     EA  +F +ML R +  D   +
Sbjct: 821 LKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVW 880

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           T LI+G    G  +  +    IM      P
Sbjct: 881 TILINGLLGAGYKDLCMEFLHIMETNRRNP 910



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 64/136 (47%)

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +IK      + ++A  +L      G      +Y TL+    +            ++  +G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           L P+++ YN ++   C+ G + D+E I+ ++ + G+ PD  TYT++I G+    +L  AF
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 471 RFHDEMLQRGFVPDDA 486
              + M + G  P+ A
Sbjct: 284 EIFNRMDEEGCEPNAA 299



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 56/144 (38%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           Y+ L++   R G   EA  L  SM  +   P   TY   +  L +  + D A +V   M 
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS 834

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
                     Y  L+   C+     EA  +F +M  R +  D + ++ LI      G  D
Sbjct: 835 DQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKD 894

Query: 153 RALMYFREMKSAGLVPDNVLYTII 176
             + +   M++    P +   TI+
Sbjct: 895 LCMEFLHIMETNRRNPSSHARTIL 918


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 251/478 (52%), Gaps = 3/478 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L ++ +++    FL  M  KG  PD +    LI  +C+ G  + A Q+M  +   G    
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V +YN LI+G CK G  + A  VLD   +MG+SP+ ATY+ +L   C +  + +A ++  
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLD---RMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
              +    PD+V+ + LI    +   + +A+  F EM++ G  PD V Y ++I G+C+ G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA++   ++   GC  DV+++N IL  LC      +A  L   ML +G  P   TF 
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI+  C+ G + KALN+ ++M +    P+  ++N LI GFC    +++A +    M+SR
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y IL+   C  G V +A  +  ++  KG  P+L+S NT+I G  + G A  A
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E L +M  +G+ PD I+  +++ G  RE  + +A      ++   + P+   YN I+TG
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            C+  +   +   L  M+ KG  P  +TYTTLI G   +   ++A +  +E+  RG V
Sbjct: 506 LCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563



 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 243/446 (54%), Gaps = 3/446 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +  +A   +  +E+ G   D  +YN LI+ YC+ G +EEA ++++ M   G
Sbjct: 120 LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---G 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TY++++  LC +G+  +A +VL   LQ    PD  T   L+  +C++  + +A 
Sbjct: 177 VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  +G  PD+V+++ LI  F + G+LD A+ + +++ S G  PD + + +I+   
Sbjct: 237 KLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSL 296

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  ++A+K+   ML KGC+  VVT+N ++N LC+  +L +A ++   M + G  P+ 
Sbjct: 297 CSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 356

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +F  LI G C    +++A+   +IM  +   PDIVTYN L+   CK G+++ A  + + 
Sbjct: 357 RSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 416

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+  SP+ ISY  +I+G   +G    A  L  EM  KG+KP L++C +++ G  R G 
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 476

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +F   +    + P++  YN++I G  + +    A   ++ M  +G  P   TY  
Sbjct: 477 VREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTT 536

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           ++ G   +G   D+  +   +  +GL
Sbjct: 537 LIKGITYEGLAEDASKLSNELYSRGL 562



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 201/373 (53%), Gaps = 3/373 (0%)

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           R   + E       M+ +G +PD+++ + LI  F + G+   A      ++ +G V D  
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            Y ++I+GYC++G + EAL++ D M   G   +  TY+ +L  LC    L +A  +    
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           L+   +PD  T T LI   CK+  + +A+ LF+ M  K  KPD+VTYN LI GFCK G +
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           ++A +    + S    P+ IS+ +++   CS G   +A +L   M+ KG  P++V+ N +
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I   C+ G   KA   L  M   G  P+S S+N LI GF   + +D+A   +  M ++G 
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            PD++TYN++LT  C+ G++ D+ +IL ++  KG +P   +Y T+I+G +     + A  
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 447

Query: 472 FHDEMLQRGFVPD 484
             +EM  +G  PD
Sbjct: 448 LLEEMCYKGLKPD 460



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 132/274 (48%), Gaps = 3/274 (1%)

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           L  L R   L E       M  +G  PD    T LI   CK G    A  +  I+ +   
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
             D+ +YN LI G+CK GE+E+A ++   M    +SPN  +Y  ++   C  G + +A +
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +    +     P +V+C  +I   C+     +A +  ++M ++G  PD ++YN LI GF 
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   +D+A   + K+ + G  PDVI++N+IL   C  GR  D+  +L  M+ KG  P   
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           T+  LIN    +  L +A    + M + G  P+ 
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 356


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 258/488 (52%), Gaps = 9/488 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCK   +D+A++ L +M   GV P+ VTY ++I+ Y   G  EEA ++   M+G+G
Sbjct: 157 IINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRG 216

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL----VESCRKENM 116
           L P + ++NS ++ LCK GR   A E+   M   G  P+  TY  LL     E C  + M
Sbjct: 217 LIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMM 276

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
           S     F  M   G+  + + F+ LI  +++ G +D A++   EM+  GL PD   Y+ +
Sbjct: 277 S----FFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTL 332

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I+  CR G + +A+   ++M+  G   + V Y++++ G C    L +A +L  EM+  G+
Sbjct: 333 ISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGI 392

Query: 237 -FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+   F +++H  CK+G +  A ++FD++     + DI+ +NTLIDG+C VGEM KA 
Sbjct: 393 PRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAF 452

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            +   MIS  I P+  +Y  L+NGY   G + +   L+ EM  K IKPT V+ N I+ G 
Sbjct: 453 SVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGL 512

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            R+G    A + L +M+  G      +YN ++ G  R    D+A  +  K+    +  ++
Sbjct: 513 FRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNI 572

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            T N ++       R  +++ +   + + GL P+ STY  +I   + + +++EA      
Sbjct: 573 TTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSS 632

Query: 476 MLQRGFVP 483
           M + G  P
Sbjct: 633 MEKSGCAP 640



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 254/485 (52%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K+ KI  A     EM Q+G  PD VT+N++INA C+   ++ A  L+  M   G
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TY S+I+G    GR + A ++  EM   GL PD  ++N+ +   C+     EA 
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAA 241

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF  M+ +G  P+IV++  L+  ++  G     + +F  MK  G+V + +++TI+I+ Y
Sbjct: 242 EIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAY 301

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA+ +  EM  +G   DV TY+T+++ LCR   L +A D FN+M+  GV P+ 
Sbjct: 302 AKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT 361

Query: 241 YTFTTLIHGHCKDGNMNKALNL-FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             + +LI G C  G++ KA  L +++M     +P+I  +N+++   CK G +  A+ ++ 
Sbjct: 362 VVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFD 421

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +       + I +  LI+GYC +G + +AF +   M+  GI P   + NT++ GY +SG
Sbjct: 422 LVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSG 481

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
                     +M  + + P +++YN +++G  R      A  ++ +M   G    + TYN
Sbjct: 482 RIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYN 541

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +IL G CR     ++ ++  ++    +  + +T  T+IN   +    +EA      +   
Sbjct: 542 IILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDS 601

Query: 480 GFVPD 484
           G VP+
Sbjct: 602 GLVPN 606



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 241/495 (48%), Gaps = 39/495 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD----- 82
           P   TY  ++N  CR    E        +   GLK      N+++  LC   R D     
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 83  ----------------------------RAKEVLDEMLQMG-----LSPDTATYNTLLVE 109
                                       R+++ LD +  M       SPD  TYNT++  
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 110 SCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD 169
             ++  + +A  ++ EM ++G  PD+V+ +++I    +   +D A +  R+M   G+ P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 170 NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
            V YT +I+GY   G   EA KM  EM  +G + D+V++N+ ++ LC+     EA ++F 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
            M  +G  P+  T+  L+HG+  +G     ++ F+ M    I  + + +  LID + K G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            M++A  + ++M  + +SP+  +Y  LI+  C MG + +A   + +M+G G++P  V  +
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVD-PDSISYNTLINGFVREENMDKAFALVSKMEN 408
           ++I+G+C  GD  KA E + +M++ G+  P+   +N++++   +E  +  A  +   +++
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKD 425

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            G   D+I +N ++ G+C  G M  +  +L  MI  G+ PD  TY TL+NG+     + +
Sbjct: 426 IGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDD 485

Query: 469 AFRFHDEMLQRGFVP 483
                 EM  +   P
Sbjct: 486 GLNLFREMSDKKIKP 500



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 208/428 (48%), Gaps = 37/428 (8%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P +FTY  ++NG C+  R +        +L+ GL  D    NT+L   C  +   +A ++
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
                                               R M   G VPD   Y I++   C 
Sbjct: 66  L----------------------------------LRRMTELGCVPDAFSYAIVLKRLCD 91

Query: 183 NGFVLEALKMRDEML-EKG-CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           +    +AL +   M  E+G C  DVVTYNT+++G  +   + +A +L++EM+++G  PD 
Sbjct: 92  DNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDV 151

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T  ++I+  CK   ++ A  L   M    + P+ VTY ++I G+  +G  E+A K++ +
Sbjct: 152 VTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFRE 211

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + P+ +S+   ++  C  G   EA  ++Y M  KG +P +V+   ++ GY   G 
Sbjct: 212 MTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGC 271

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +    F + M  +G+  + + +  LI+ + +   MD+A  ++S+M+ QGL PDV TY+ 
Sbjct: 272 FADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYST 331

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++  CR GR+ D+     +MI  G+ P+   Y +LI G  +  +L +A     EM+  G
Sbjct: 332 LISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNG 391

Query: 481 FV-PDDAF 487
              P+ AF
Sbjct: 392 IPRPNIAF 399



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 196/372 (52%), Gaps = 1/372 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K   +D A + L EM+ +G+ PD  TY+TLI+A CR G L +A    N M G G
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG 356

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKENMSEA 119
           ++P    Y+SLI G C  G   +AKE++ EM+  G+  P+ A +N+++   C++  + +A
Sbjct: 357 VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDA 416

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             IF  +   G   DI+ F+TLI  +   G++ +A      M SAG+ PD   Y  ++NG
Sbjct: 417 HHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNG 476

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y ++G + + L +  EM +K      VTYN IL+GL RA     A  + +EM+  G    
Sbjct: 477 YFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVS 536

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  ++ G C++   ++A+ +F  +   ++K +I T NT+I+    V   E+A  L++
Sbjct: 537 LPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFS 596

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    + PN  +YGI+I      G V EA  ++  M   G  P     N  I+     G
Sbjct: 597 AISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKG 656

Query: 360 DASKADEFLSKM 371
           +  KA  ++SK+
Sbjct: 657 EIVKAGNYMSKV 668



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 149/307 (48%), Gaps = 1/307 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   C    +  AK  + EM   G+  P+   +N+++++ C+EG + +A  + + +   
Sbjct: 367 LIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDI 426

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +  +  +N+LI+G C  G   +A  VLD M+  G+ PDT TYNTL+    +   + + 
Sbjct: 427 GERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDG 486

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EMS + + P  V+++ ++    R G+   A     EM   G       Y II+ G
Sbjct: 487 LNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKG 546

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CRN    EA+ M  ++       ++ T NT++N +   +   EA DLF+ + + G+ P+
Sbjct: 547 LCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPN 606

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +I    K+G++ +A N+F  M +    P     N  I    + GE+ KA    +
Sbjct: 607 ASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMS 666

Query: 300 DMISRKI 306
            +  + I
Sbjct: 667 KVDGKSI 673



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 38/219 (17%)

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC---RSGD 360
           R   P   +YG+++NG C           +  ++  G+K    + NT++K  C   R+ D
Sbjct: 2   RVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDD 61

Query: 361 ASKA------------DEF--------------------LSKMVS--EGV-DPDSISYNT 385
           A K             D F                    L +M++  EGV  PD ++YNT
Sbjct: 62  AVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNT 121

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+GF +E  + KA  L  +M  QG VPDV+T+N I+   C+   + ++EL+L +M++ G
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + P++ TYT++I+G+ +    +EA +   EM  RG +PD
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPD 220


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 232/416 (55%), Gaps = 1/416 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  KG  PD VTY  ++N  C+ G  + AF L+N M    L+PGV  YN++I+GLCK   
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A  +  EM   G+ P+  TY++L+   C     S+A  +  +M  R + PD+ +FS 
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI  F + G+L  A   + EM    + P  V Y+ +ING+C +  + EA +M + M+ K 
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  DVVTYNT++ G C+ K + E  ++F EM +RG+  +  T+  LI G  + G+ + A 
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            +F  M    + P+I+TYNTL+DG CK G++EKA  ++  +   K+ P   +Y I+I G 
Sbjct: 247 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 306

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G V + + L+  +  KG+KP +V+ NT+I G+CR G   +AD    +M  +G  P+S
Sbjct: 307 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 366

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
             YNTLI   +R+ + + +  L+ +M + G   D  T  ++ T     GR+  S L
Sbjct: 367 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV-TNMLHDGRLDKSFL 421



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 137/400 (34%), Positives = 227/400 (56%), Gaps = 1/400 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LCK    D A   L +MEQ  + P  + YNT+I+  C+   +++A  L   M  KG
Sbjct: 22  VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 81

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY+SLI+ LC  GR   A  +L +M++  ++PD  T++ L+    ++  + EAE
Sbjct: 82  IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 141

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM +R + P IV++S+LI  F  + +LD A   F  M S    PD V Y  +I G+
Sbjct: 142 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 201

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V E +++  EM ++G V + VTYN ++ GL +A     A ++F EM+  GV P+ 
Sbjct: 202 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 261

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TL+ G CK+G + KA+ +F+ + +  ++P I TYN +I+G CK G++E    L+ +
Sbjct: 262 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 321

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + P+ ++Y  +I+G+C  G   EA  L+ EM   G  P     NT+I+   R GD
Sbjct: 322 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 381

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
              + E + +M S G   D+ S   L+   + +  +DK+F
Sbjct: 382 REASAELIKEMRSCGFAGDA-STIGLVTNMLHDGRLDKSF 420



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 228/407 (56%)

Query: 52  LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC 111
           L++ M  KG +P + TY  ++NGLCK+G  D A  +L++M Q  L P    YNT++   C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           + ++M +A  +F EM  +G+ P++V++S+LI      G+   A     +M    + PD  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            ++ +I+ + + G ++EA K+ DEM+++     +VTY++++NG C    L EA  +F  M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           + +  FPD  T+ TLI G CK   + + + +F  M+Q+ +  + VTYN LI G  + G+ 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           + A +++ +M+S  + PN ++Y  L++G C  G + +A  ++  +    ++PT+ + N +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I+G C++G      +    +  +GV PD ++YNT+I+GF R+ + ++A AL  +M+  G 
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           +P+   YN ++    R G    S  ++  M   G   D ST   + N
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 206/359 (57%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  +G  PD+V++  ++    + G  D A     +M+   L P  ++Y  II+G C+   
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + +AL +  EM  KG   +VVTY+++++ LC     ++A  L ++M+ER + PD +TF+ 
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI    K+G + +A  L+D M ++SI P IVTY++LI+GFC    +++A +++  M+S+ 
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ ++Y  LI G+C    V E   ++ EM  +G+    V+ N +I+G  ++GD   A 
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E   +MVS+GV P+ ++YNTL++G  +   ++KA  +   ++   + P + TYN+++ G 
Sbjct: 247 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 306

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+ G++ D   +   +  KG+ PD   Y T+I+G   + + +EA     EM + G +P+
Sbjct: 307 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 365



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 215/398 (54%)

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           ++D M+  G  PD  TY  ++   C++ +   A  +  +M +  + P ++ ++T+I    
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           +   +D AL  F+EM++ G+ P+ V Y+ +I+  C  G   +A ++  +M+E+    DV 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T++ +++   +   L EA+ L++EM++R + P   T+++LI+G C    +++A  +F+ M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             K   PD+VTYNTLI GFCK   +E+  +++ +M  R +  N ++Y ILI G    G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  ++ EMV  G+ P +++ NT++ G C++G   KA      +    ++P   +YN +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G  +   ++  + L   +  +G+ PDV+ YN +++GFCR+G   +++ +   M E G 
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P+   Y TLI   +   + + +     EM   GF  D
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 400



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 45/84 (53%)

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
           AL+ +M  +G  PD++TY V++ G C++G    +  +L +M +  L P    Y T+I+G 
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPD 484
               ++ +A     EM  +G  P+
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPN 85


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  281 bits (719), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 262/479 (54%), Gaps = 1/479 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K  +  +A   L +ME+  V  D  TYN +I+  CR      AF L+  M    L P   
Sbjct: 272 KKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDEC 331

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TYN+LING  ++G+ + A+ V + ML+  L P  ATY T++   CR   + +A  I  EM
Sbjct: 332 TYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEM 391

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              GV P  +++S L+  + +   L  A+    ++KS G+  +  + TI+I+G+C+ G +
Sbjct: 392 QITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEI 451

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A ++   M E G   DV+TY+ ++NG+CR   + E  ++ + M + G+ P+   +TTL
Sbjct: 452 SKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 511

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I  +CK G + +AL  F  + ++ +  + V +N L+  F + G + +A      M    I
Sbjct: 512 ICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNI 571

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           S + +S+  +I+ YC  G++  AF ++ +MV  G  P + +   +++G C+ G   +A +
Sbjct: 572 SFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQ 631

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
           F+S ++      D  ++N L+ G  R   +D+A  L  KM     +PD+ TY ++L+GFC
Sbjct: 632 FMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFC 691

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA-FRFHDEMLQRGFVPD 484
           R+G++  + +IL  M+EKG+ PD   YT L+NG +++  +K A + FH+ + + G   D
Sbjct: 692 RKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYAD 750



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 267/555 (48%), Gaps = 71/555 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++  C++ +ID A   L EM+  GV P  +TY+ L+N YC+   L  A  LM  +  +G
Sbjct: 371 MIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRG 430

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +         LI+G C+ G   +AK++L  M + G+ PD  TY+ L+   CR   M E +
Sbjct: 431 ITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETK 490

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP------------ 168
           EI   M + G+ P+ V ++TLI  + + G +  AL +F ++   GLV             
Sbjct: 491 EILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAF 550

Query: 169 -----------------------DNVLYTIIINGYCRNGFVLEALKMRDEMLEKG----- 200
                                  D+V +  II+ YC  G ++ A  + D+M+  G     
Sbjct: 551 YREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNV 610

Query: 201 ------------------------CVMDVV------TYNTILNGLCRAKMLTEADDLFNE 230
                                   C++D+       T+N +L G+CR   L EA DL  +
Sbjct: 611 CTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEK 670

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           M++    PD +T+T L+ G C+ G +  AL +  +M +K + PD V Y  L++G    G+
Sbjct: 671 MIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQ 730

Query: 291 MEKANKLWADMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           ++ A+ ++ ++I ++ +  + I+Y  L+NGY    +V    R+  +M    + P   S N
Sbjct: 731 VKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYN 790

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            ++ GY + G  SK+      MV +G+ PD+++Y  LI G      +D A   + KM  +
Sbjct: 791 ILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLE 850

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+ PD + +++++T F  + +MH++  +   M    ++P   T++ +ING + +  L  +
Sbjct: 851 GIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHS 910

Query: 470 FRFHDEMLQRGFVPD 484
            +   EMLQ G  P+
Sbjct: 911 HKVLHEMLQVGLQPN 925



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 254/520 (48%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   ++ KI+ A+     M ++ + P   TY T+I+ YCR   +++A  +++ M   G
Sbjct: 336 LINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITG 395

Query: 61  LKPGVFTYNSLINGLCK-----------------------------------KGRCDRAK 85
           + P   TY++L+NG CK                                    G   +AK
Sbjct: 396 VMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAK 455

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++L  M + G+ PD  TY+ L+   CR   M E +EI   M + G+ P+ V ++TLI  +
Sbjct: 456 QILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYY 515

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G +  AL +F ++   GLV + V++  +++ + R G + EA   R  M       D 
Sbjct: 516 CKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDS 575

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V++N I++  C    +  A  ++++M+  G  P+  T+  L+ G C+ G++ +A      
Sbjct: 576 VSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSC 635

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +       D  T+N L+ G C+ G +++A  L   MI     P+  +Y IL++G+C  G 
Sbjct: 636 LLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGK 695

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDSISYN 384
           +  A  +   M+ KG+ P  V+   ++ G    G    A     +++  EG+  D I+YN
Sbjct: 696 ILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYN 755

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           +L+NG+++  N++    ++S M    + P+  +YN+++ G+ ++G+   S  +   M+ K
Sbjct: 756 SLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRK 815

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G+ PD  TY  LI G      +  A +F ++M+  G  PD
Sbjct: 816 GIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 855



 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 243/484 (50%), Gaps = 1/484 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  LC+   +  A+ F+  +       D  T+N L+   CR G L+EA  L   M    
Sbjct: 616  LLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNN 675

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P + TY  L++G C+KG+   A  +L  ML+ G+ PDT  Y  LL     +  +  A 
Sbjct: 676  CLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 735

Query: 121  EIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F E+  + G+  D +++++L+  + ++  ++       +M    + P++  Y I+++G
Sbjct: 736  YVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHG 795

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            Y + G   ++L +   M+ KG   D VTY  ++ GL    ++  A     +M+  G+FPD
Sbjct: 796  YVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 855

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
               F  LI    +   M+ AL +F+ M    + P   T++ +I+G  + G ++ ++K+  
Sbjct: 856  RLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLH 915

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +M+   + PN+  Y  L+N  C +G +  AFRL  EM   GI P  V+ ++II+G CR G
Sbjct: 916  EMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCG 975

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               +A    S M+  G+ P   ++ TL++   +E  +  A  L   ME   L  DV++YN
Sbjct: 976  KLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYN 1035

Query: 420  VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            V++TG C+   + D+  +   M  KGL P+ +TY TL     S   ++      +++ +R
Sbjct: 1036 VLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEER 1095

Query: 480  GFVP 483
            G +P
Sbjct: 1096 GLIP 1099



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 238/485 (49%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V A  K+ K+  A + +  M+  G     V+ NT++NA   EG  +  +  +     + 
Sbjct: 162 LVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARK 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              GV T N L+N LC  G   +A+++L +M    +S ++ TYNT+L    +K     A 
Sbjct: 222 FPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGRFKAAL 280

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M R  V  D+ +++ +I    R  +  RA +  + M+   L PD   Y  +ING+
Sbjct: 281 CVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGF 340

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G +  A  + + ML +  V  V TY T+++G CR + + +A  + +EM   GV P  
Sbjct: 341 FREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSE 400

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ L++G+CK   +  A+ L + +  + I  +      LIDGFC+VGE+ KA ++   
Sbjct: 401 LTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKS 460

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I P+ I+Y  LING C M  + E   +   M   GI P  V   T+I  YC++G 
Sbjct: 461 MFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGY 520

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    +   G+  + + +N L++ F RE  + +A      M    +  D +++N 
Sbjct: 521 VKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNR 580

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+  +C +G +  +  +   M+  G +P+  TY  L+ G     +L +A +F   +L   
Sbjct: 581 IIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIP 640

Query: 481 FVPDD 485
           F  D+
Sbjct: 641 FAIDE 645



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 227/454 (50%), Gaps = 1/454 (0%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           V +  L+ AY +E  + +A   +  M   G K    + N+++N L ++G        L E
Sbjct: 157 VVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRE 216

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
            L         T N LL   C      +AE++  +M    ++ + V+++T++  + + G+
Sbjct: 217 SLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGR 275

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
              AL    +M+   +  D   Y I+I+  CR      A  +   M +     D  TYNT
Sbjct: 276 FKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNT 335

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++NG  R   +  A  +FN ML + + P   T+TT+I G+C++  ++KAL++   M    
Sbjct: 336 LINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITG 395

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           + P  +TY+ L++G+CKV  +  A  L  D+ SR I+ N     ILI+G+C +G +++A 
Sbjct: 396 VMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAK 455

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           ++   M   GI P +++ + +I G CR     +  E LS+M   G+ P+ + Y TLI  +
Sbjct: 456 QILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYY 515

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +   + +A      +  +GLV + + +N +L  F R+G + ++E     M    ++ D 
Sbjct: 516 CKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDS 575

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++  +I+ +  + N+  AF  +D+M++ G+ P+
Sbjct: 576 VSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPN 609



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 163/345 (47%), Gaps = 35/345 (10%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++N   K   +++ K  + +M Q  VYP++ +YN L++ Y + G   ++  L   M  KG
Sbjct: 757  LMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG 816

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            ++P   TY  LI GL + G  D A + L++M+  G+ PD   ++ L+     K  M  A 
Sbjct: 817  IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNAL 876

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++F  M    ++P   +FS +I    R G LD +     EM   GL P++  Y  ++N  
Sbjct: 877  QVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAK 936

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            CR G +  A ++++EM   G V   V  ++I+ GLCR   L EA  +F+ M+  G+ P  
Sbjct: 937  CRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTV 996

Query: 241  YTFTTLIH-----------------------------------GHCKDGNMNKALNLFDI 265
             TFTTL+H                                   G CKD +++ AL+L+  
Sbjct: 997  ATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGE 1056

Query: 266  MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
            M  K + P+I TY TL       G ++   +L  D+  R + P Y
Sbjct: 1057 MKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPAY 1101



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 26/302 (8%)

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNG--LCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
           ALK+   ++E+   +D +TY   +    L +A+M ++A  +   +   G F     FT+L
Sbjct: 87  ALKILSSIVERSG-LDRITYVYCMAVPILIQAQMHSQAMSVLKHLAVTG-FSCTAIFTSL 144

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK--LWADMISR 304
           +          + ++ FD           V +  L+  + K  ++  A    L+ D    
Sbjct: 145 L----------RTISRFDPTNH-------VVFELLVKAYVKERKVLDAAVAVLFMDDCGF 187

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
           K SP  +S   ++N     G     +    E + +     + +CN ++   C +G+  KA
Sbjct: 188 KASP--VSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKA 245

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           ++ L KM S  +  +S++YNT+++ +V++     A  ++  ME   +  DV TYN+++  
Sbjct: 246 EDMLQKMKSCHIS-NSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDK 304

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            CR  R   + L+L RM +  L PD  TY TLING   +  +  A    + ML++  VP 
Sbjct: 305 LCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPS 364

Query: 485 DA 486
            A
Sbjct: 365 VA 366


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  281 bits (719), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 261/485 (53%), Gaps = 5/485 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+ ++++ A+  L  M++ G  PD   YN LI+ Y +     +AF+ +  M    
Sbjct: 16  LLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY ++++GLCK GR   A ++LDEM   G SP+  TYN ++   C +  + EA+
Sbjct: 76  CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAK 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM+ RG  PD+V++++ I    +  ++D A  +   M    + PD V YT +ING 
Sbjct: 136 KMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGL 192

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  A +M D+M  +GC  DVVTY+++++G C+   +  A  L + ML+ G  P+ 
Sbjct: 193 CKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 252

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + +L+    + G++ KA ++   M ++   PD+V+YN  IDG CK   ++KA  ++  
Sbjct: 253 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 312

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R  +PN  SY +L+   C    + +A  L  +   K     ++    ++ G C+ G 
Sbjct: 313 MVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGR 372

Query: 361 ASKADEFLSKMVSEGV-DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             +A    SK++ E + +PD   YN +++   +   +DKA  +  +M  +    +V+T+N
Sbjct: 373 FDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWN 431

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++ G C   R+ D+E +L  M+++G  PD  TY TL++          A    +E ++ 
Sbjct: 432 ILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKG 491

Query: 480 GFVPD 484
           G VPD
Sbjct: 492 GCVPD 496



 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 230/425 (54%), Gaps = 4/425 (0%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M  K  +P  FT+  L+ GLC+  + ++A+++L  M +MG  PD A YN L+    + ++
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
             +A +   EM +    P +V+++ ++    + G+   A+    EM+  G  P+   Y +
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           I+ G C    + EA KM +EM  +G   DVVTYN+ + GLC+   + EA      M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           V PD  ++TT+I+G CK G+++ A  + D MT +   PD+VTY++LIDGFCK GE+E+A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            L   M+     PN ++Y  L+     +GH+ +A  +  EM  +G  P +VS N  I G 
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C++    KA     +MV  G  P++ SY+ L+    +++ +D A  LV +   +  + D+
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMI-EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           + Y V+L G C+ GR  ++  +  +++ EK   PD   Y  +++ H  +  + +A + H 
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 417

Query: 475 EMLQR 479
           +ML+R
Sbjct: 418 QMLER 422



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 239/470 (50%), Gaps = 34/470 (7%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  LCK  ++D A+ FL  M    V PD V+Y T+IN  C+ G L+ A ++++ M+ +G 
Sbjct: 157 IKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGC 213

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P V TY+SLI+G CK G  +RA  +LD ML++G  P+   YN+LL    R  ++ +AE+
Sbjct: 214 TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAED 273

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  EM RRG  PD+VS++  I    +  ++ +A   F  M   G  P+   Y++++   C
Sbjct: 274 MLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELC 333

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-PDF 240
           +   + +A+ + ++  EK  ++D++ Y  +L+GLC+     EA  LF+++L+  +  PD 
Sbjct: 334 KKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDV 393

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +  ++  HCK   ++KAL +   M +++   ++VT+N L+ G C    +  A  +   
Sbjct: 394 FFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLT 452

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS------------- 347
           M+     P++++YG L++  C  G    A  L+ E V  G  P +V+             
Sbjct: 453 MVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENM 512

Query: 348 ---------------CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING-FV 391
                           N +I GY  +G      +   +++   V+P++ ++   I+G  V
Sbjct: 513 AEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLV 572

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           + E++ KA  L  +    G  PD+   N ++  F + G + ++  I + M
Sbjct: 573 KAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  281 bits (719), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 248/457 (54%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +  ++ +  +         L   M  KG+ P + T + LIN  C  G+   +  V
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  P+T   NTL+   C K  + ++     ++  +G   D VS+  L+    +
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+   A+   R ++     PD V+Y+ II+G C++  V EA  +  EM  +G   DV+T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T++ G C A  L EA  L NEM+ + + P+ YT+ TLI   CK+G + ++ NL  +MT
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +K +KPD+V Y+ L+DG+C VGE++KA +++  M+   ++P+  SY I+ING C    V 
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L  EM+ K + P  V+ +++I G C+ G  +   +   +M   G   + ++YN+L+
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  + +N+DKA AL  KM+ +G+ P+  TY  ++ G C+ GR+   + +   ++ KG  
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYC 427

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D  TYT +I+G   +    EA     +M   G +P+
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPN 464



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 250/464 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME KG+ PD VT + LIN +C  G +  +F ++  +   G +P     N+L+ GLC KG
Sbjct: 35  QMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKG 94

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              ++    D+++  G   D  +Y  LL   C+      A ++   +  R   PD+V +S
Sbjct: 95  EVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYS 154

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++  +D A   + EM + G+ PD + YT +I G+C  G ++EA  + +EM+ K
Sbjct: 155 TIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK 214

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               ++ TYNT+++ LC+   + E+ +L   M ++GV PD   ++ L+ G+C  G + KA
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKA 274

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +F +M Q  + PD+ +YN +I+G CK   +++A  L  +M+ + + P+ ++Y  LI+G
Sbjct: 275 KQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDG 334

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G +T    L  EM  +G    LV+ N+++ G C++ +  KA     KM   G+ P+
Sbjct: 335 LCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPN 394

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +Y  LI+G  +   + K  AL   +  +G   DV TY V+++G C++G   ++  +  
Sbjct: 395 KYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKS 454

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +M + G  P+  T+  +I   + ++   +A +   EM+ +G +P
Sbjct: 455 KMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 244/454 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   ++  +   L ++ + G  P+T+  NTL+   C +G ++++    + +  +G
Sbjct: 51  LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQG 110

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y  L+NGLCK G    A ++L  +      PD   Y+T++   C+ + + EA 
Sbjct: 111 FQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAY 170

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM+ RG+ PD+++++TLI  F   GQL  A     EM    + P+   Y  +I+  
Sbjct: 171 DLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTL 230

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V E+  +   M +KG   DVV Y+ +++G C    + +A  +F  M++ GV PD 
Sbjct: 231 CKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDV 290

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y++  +I+G CK   +++A+NL   M  K++ PD VTY++LIDG CK+G +     L  +
Sbjct: 291 YSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKE 350

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R    N ++Y  L++G C   ++ +A  L+ +M  +GI+P   +   +I G C+ G 
Sbjct: 351 MHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGR 410

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K       ++ +G   D  +Y  +I+G  +E   D+A A+ SKME+ G +P+ +T+ +
Sbjct: 411 LKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEI 470

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           I+     +     +E +L  MI KGL P R+ ++
Sbjct: 471 IIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHS 504



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 210/394 (53%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML +   P    +  +L    + ++      +  +M  +G+ PD+V+ S LI  F   GQ
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +  +     ++   G  P+ ++   ++ G C  G V ++L   D+++ +G  MD V+Y  
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +LNGLC+      A  L   + +R   PD   ++T+I G CKD  +++A +L+  M  + 
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I PD++TY TLI GFC  G++ +A  L  +MI + I+PN  +Y  LI+  C  G V E+ 
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L   M  KG+KP +V  + ++ GYC  G+  KA +    MV  GV+PD  SYN +ING 
Sbjct: 241 NLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            + + +D+A  L+ +M ++ ++PD +TY+ ++ G C+ GR+     +   M  +G   + 
Sbjct: 301 CKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANL 360

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TY +L++G     NL +A     +M +RG  P+
Sbjct: 361 VTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPN 394


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 258/484 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+    +M  KGV PD  TYN LI+ Y   G  +E  +++  MS  G
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG 303

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TY SL+N LC  GRC  A+ + D M++ G+ P+ A Y  L+     K  +SE  
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M   G++PD   F+ +   +++   +D A+  F +MK  GL PD V Y  +I+  
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDAL 423

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A+   ++M+ +G   ++  +N+++ GLC      +A + + EML +G+ PD 
Sbjct: 424 CKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDV 483

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F T++   C  G + KA  L D+M +   +P +++Y TLI G C VG +++A K    
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDV 543

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+  +Y  L++GYC  G + +A+ ++ EM+  GI P +V+ +TI+ G   +  
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A E    M++ G   +   YN ++NG  +   +D+AF L   + ++    ++ T+N+
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  D+  +   +   GL PD  TY  +    + +  L+E       M + G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723

Query: 481 FVPD 484
             P+
Sbjct: 724 TTPN 727



 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 251/484 (51%), Gaps = 3/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEM---EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++   C + + + A   L  M   + +   P+ V+Y  +IN +  EG +++A+ L   M 
Sbjct: 171 LLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMM 230

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            +G++P V TY ++I+GLCK    DRA+ V  +M+  G+ PD  TYN L+          
Sbjct: 231 DRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWK 290

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           E   +  EMS  G+ PD  ++ +L+     NG+   A   F  M   G+ P+  +Y I+I
Sbjct: 291 EVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILI 350

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +GY   G + E   + + M+E G   D   +N I     +  M+ EA  +FN+M ++G+ 
Sbjct: 351 HGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLS 410

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD   +  LI   CK G ++ A+  F+ M  + + P+I  +N+L+ G C V + EKA + 
Sbjct: 411 PDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEF 470

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           + +M+++ I P+ + +  ++   C+ G V +A RL   M   G +P ++S  T+I G+C 
Sbjct: 471 YFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCL 530

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A + L  M+S G+ PD  +YNTL++G+ R   +D A+ +  +M   G+ P V+T
Sbjct: 531 VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVT 590

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y+ IL G     R  +++ +   MI  G   +   Y  ++NG    N + EAF+    + 
Sbjct: 591 YSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLC 650

Query: 478 QRGF 481
            + F
Sbjct: 651 SKDF 654



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 246/497 (49%), Gaps = 39/497 (7%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V PD  TY+ LI  +CR G LE  F     +   G +      N L+ GLC   R   A 
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 86  EVL-DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI---------------------- 122
           ++L   M ++G +PD  +YNTLL   C ++   EA E+                      
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 123 ----------------FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
                           F EM  RG+ P++V+++T+I    +   +DRA   F++M   G+
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            PDN  Y  +I+GY   G   E ++M +EM   G   D  TY ++LN LC      EA  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           LF+ M+ +G+ P+   +  LIHG+   G +++  +L ++M +  + PD   +N +   + 
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K   +++A  ++  M  + +SP+ ++YG LI+  C +G V +A   + +M+ +G+ P + 
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
             N+++ G C      KA EF  +M+++G+ PD + +NT++     +  + KA  L+  M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           E  G  P VI+Y  ++ G C  GR+ ++   L  M+  GL PD  TY TL++G+     +
Sbjct: 510 ERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569

Query: 467 KEAFRFHDEMLQRGFVP 483
            +A+    EML+ G  P
Sbjct: 570 DDAYGVFREMLRNGITP 586



 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 237/484 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N    + ++D A     EM  +G+ P+ VTY T+I+  C+   ++ A  +   M  KG
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TYN LI+G    G+      +L+EM   GL PD  TY +LL   C      EA 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M R+G+ P++  +  LI  ++  G L         M   GL PD+ ++ II   Y
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + EA+ + ++M ++G   DVV Y  +++ LC+   + +A   FN+M+  GV P+ 
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + F +L++G C      KA   +  M  + I+PD+V +NT++   C  G++ KA +L   
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P  ISY  LI G+C +G + EA +    M+  G+KP   + NT++ GYCR+G 
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M+  G+ P  ++Y+T+++G        +A  L   M   G   ++  YN+
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           IL G  +   + ++  +   +  K    + +T+  +I         ++A      +   G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 481 FVPD 484
            VPD
Sbjct: 689 LVPD 692



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 224/455 (49%), Gaps = 49/455 (10%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVE----SCRKENMSEAE---EIFCEMSRR---GV 131
           D A ++ D +L          +N LL      S R+ + +E+E    +F  M R     V
Sbjct: 31  DDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            PD  ++S LIG F R G+L+     F  +  +G   +N++   ++ G C    + EA+ 
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 192 -MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL----------------------- 227
            +   M E GC  DVV+YNT+L G C  K   EA +L                       
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210

Query: 228 ---------------FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
                          F EM++RG+ P+  T+TT+I G CK   +++A  +F  M  K +K
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           PD  TYN LI G+  +G+ ++  ++  +M +  + P+  +YG L+N  C+ G   EA  L
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           +  M+ KGIKP +     +I GY   G  S+  + L+ MV  G+ PD   +N +   + +
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +  +D+A  + +KM+ QGL PDV+ Y  ++   C+ GR+ D+ L   +M+ +G+ P+   
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           + +L+ G  + +  ++A  F+ EML +G  PD  F
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVF 485


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 259/485 (53%), Gaps = 3/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYP-DTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC++ ++D+A          G++  D + +NTLI  YCR G    A  + + M+ +
Sbjct: 141 LLAGLCRNGQVDAAAAL--ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQ 198

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL   V  YN+L+ G C+ G+ D A+ VLD M + G+ P+ ATY   +V  CR + + EA
Sbjct: 199 GLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++  M R GV  D+V+ S L+    R+G+   A   FREM   G VP++V Y  +I+ 
Sbjct: 259 FDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDS 318

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G   E L +  EM+ +G VMD+VTY  +++ L +     E  D     L   +  +
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLN 378

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T LI   CK  N+++A  +   M +KSI P++VT++++I+GF K G ++KA +   
Sbjct: 379 GVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  R I+PN ++YG LI+G+        A  ++++M+ +G++      ++++ G  ++G
Sbjct: 439 MMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNG 498

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A          G+  D ++Y TLI+G  +  +M  AF    ++ ++ ++PD + YN
Sbjct: 499 KIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYN 558

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V +   C  G+  +++ IL  M   GL PD+STY T+I  H  +    +A +   EM   
Sbjct: 559 VFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618

Query: 480 GFVPD 484
              P+
Sbjct: 619 SIKPN 623



 Score =  270 bits (691), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 256/486 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC+D +   A     EM++ G  P+ VTY TLI++  + G  +E   L+  M  +G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   + TY +L++ L K+G+ D  K+ L   L   LS +  TY  L+   C+  N+ EAE
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAE 399

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  + ++P++V+FS++I  F + G LD+A  Y R MK  G+ P+ V Y  +I+G+
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      AL++  +ML +G  ++    ++++NGL +   + EA  LF +    G+  D 
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TTLI G  K G+M  A      +  +++ PD V YN  I+  C +G+ ++A  +  +
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTE 579

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  + P+  +Y  +I  +C  G   +A +L +EM    IKP L++ NT++ G   +G 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L++MVS G  P S+++  ++    +   +D    +   M N GL  D+  YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L   C  G    + ++L  M+  G+ PD  T+  LI GH   ++L  AF  + +ML + 
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 481 FVPDDA 486
             P+ A
Sbjct: 760 ISPNIA 765



 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 227/438 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L ++ KI+ A     +    G+  D V Y TLI+   + G +  AF+    +  + 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    YN  IN LC  G+   AK +L EM  MGL PD +TYNT++V  CRK   ++A 
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM    + P++++++TL+      G +++A     EM SAG  P ++ +  ++   
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++  +   L + + M+  G   D+  YNT+L  LC   M  +A  +  EML  G+ PD 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI GHCK  +++ A   +  M  ++I P+I T+NTL+ G   VG + +A  +  +
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + PN ++Y IL+ G+    +  EA RL+ EMVGKG  P + + N +I  + ++G 
Sbjct: 790 MEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A E    M   GV P S +Y+ L++G+ R  N  +    +  M+ +G  P   T + 
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909

Query: 421 ILTGFCRQGRMHDSELIL 438
           I   F + G    ++ +L
Sbjct: 910 ICRAFSKPGMTWQAQRLL 927



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 253/518 (48%), Gaps = 35/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK H +D A+  L EME+K + P+ VT++++IN + + G L++A +    M  +G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 61  LKPGVFTY-----------------------------------NSLINGLCKKGRCDRAK 85
           + P V TY                                   +SL+NGL + G+ + A 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  +    GLS D   Y TL+    +  +M  A +   E+  R + PD V ++  I   
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+   A     EM++ GL PD   Y  +I  +CR G   +ALK+  EM       ++
Sbjct: 565 CILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TYNT++ GL     + +A  L NEM+  G  P   T   ++    +   ++  L++ + 
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    +  DI  YNTL+   C  G   KA  +  +M+   I+P+ I++  LI G+C   H
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  AF  + +M+ + I P + + NT++ G    G   +A   L +M   G++P++++Y+ 
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+ G  ++ N  +A  L  +M  +G VP V TYN +++ F + G M  ++ +   M ++G
Sbjct: 805 LVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           ++P   TY  L++G     N  E  +   +M ++GF P
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 193/370 (52%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N LC   K   AK  L EM   G+ PD  TYNT+I ++CR+G   +A +L++ M    +
Sbjct: 561 INCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP + TYN+L+ GL   G  ++AK +L+EM+  G SP + T+  +L    +   +    +
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           I   M   G+  DI  ++TL+ +   +G   +A +   EM  +G+ PD + +  +I G+C
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++  +  A     +ML +    ++ T+NT+L GL     + EA  +  EM + G+ P+  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  L+ GH K  N  +A+ L+  M  K   P + TYN LI  F K G M +A +L+ DM
Sbjct: 801 TYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R + P   +Y IL++G+  + + TE  +   +M  KG  P+  + + I + + + G  
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 362 SKADEFLSKM 371
            +A   L  +
Sbjct: 921 WQAQRLLKNL 930



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 116/231 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC       A + L EM   G+ PDT+T+N LI  +C+   L+ AF     M  + 
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + T+N+L+ GL   GR   A  VL EM + GL P+  TY+ L+    ++ N  EA 
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAM 819

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++CEM  +G  P + +++ LI  F++ G + +A   F++M+  G+ P +  Y I+++G+
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            R     E  K   +M EKG      T + I     +  M  +A  L   +
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/94 (22%), Positives = 45/94 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K   +  AK    +M+++GV+P + TY+ L++ + R     E  + +  M  KG
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
             P   T + +     K G   +A+ +L  + ++
Sbjct: 900 FSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  281 bits (718), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 271/481 (56%), Gaps = 20/481 (4%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           KD+ + SA      M       +++  + L+ A+ R   +   F+        G K  + 
Sbjct: 63  KDYSV-SAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLI 121

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           + N L++GL K+      + V  EM++  +  +  ++N ++   C+   ++ A ++  +M
Sbjct: 122 SCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDM 181

Query: 127 SRRGVAPDIVSFSTLIGIF---SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
              GV+P++++++TLI  +    R G++ +A    +EM + G+ P+ V Y I+I+G+C++
Sbjct: 182 KVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKD 241

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
             V  A+++  EM  +G   +VVTYN ++NGLC    + EA  L ++M+   + P+  T 
Sbjct: 242 ENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTH 301

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             LI+G CK+  +N+A+NLF+ M ++ + P+ +TY TLID +CK G ME A  L+  MI 
Sbjct: 302 NVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMID 361

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R I P   +Y  LI G C  G V  A  L  EMV K +   +V+ N +I   C+ G++ K
Sbjct: 362 RGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRK 421

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A + L +M  +G++P  ++YNTL++G+ RE N+  A  + ++ME +G   +V+T+NV++ 
Sbjct: 422 AVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIK 481

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GFC +GR+ D+  +L  M+E+GL P+R+TY  +                 +EM+++GFVP
Sbjct: 482 GFCLKGRLEDANGLLNEMLERGLVPNRTTYEII----------------KEEMMEKGFVP 525

Query: 484 D 484
           D
Sbjct: 526 D 526



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 238/404 (58%), Gaps = 8/404 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K+ +    +    EM ++ +  + +++N ++N  C+ G L  A  ++  M   G
Sbjct: 126 LLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWG 185

Query: 61  LKPGVFTYNSLINGLCKKGRCD---RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           + P V TYN+LI+G CK GR     +A  +L EM+  G+ P+  TYN L+   C+ EN+S
Sbjct: 186 VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVS 245

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A  +F EM R+G+ P++V+++ LI     +G++D A+    +M S+ L P+ V + ++I
Sbjct: 246 GAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLI 305

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG+C+N  V EA+ + ++M ++G   + +TY T+++  C+   + +A  L+N M++RG+F
Sbjct: 306 NGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  LI G C+ G++  A +L + M  K +  D+VTYN LID  CK GE  KA KL
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M  + ++P++++Y  L++GYC  G++  A  +   M  KG +  +V+ N +IKG+C 
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCL 485

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            G    A+  L++M+  G+ P+  +Y       ++EE M+K F 
Sbjct: 486 KGRLEDANGLLNEMLERGLVPNRTTYE-----IIKEEMMEKGFV 524



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 112/205 (54%), Gaps = 16/205 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A CKD +++ A      M  +G++P+  TYN LI   CR+G ++ A  LMN M  K 
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   V TYN LI+ LCKKG   +A ++LDEM + GL+P   TYNTL+   CR+ N+  A 
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M R+G   ++V+ + LI  F   G+L+ A     EM   GLVP+   Y II    
Sbjct: 459 IVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII---- 514

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDV 205
                       ++EM+EKG V D+
Sbjct: 515 ------------KEEMMEKGFVPDI 527


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  281 bits (718), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 156/492 (31%), Positives = 255/492 (51%), Gaps = 8/492 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +  +  + D A      M++K   PD  T+  L++  C+ G  E+AF++ + M   G
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219

Query: 61  -LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P    + +++  L K  R   A+EV  +M + G  PD   YNT++    +  +  EA
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEA 279

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++   M  +   P  V++  L+    + G L+RA   FR M ++G  P++V+YT +I+G
Sbjct: 280 LKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG 339

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + ++G + EA  + DEM+E G   DV+T+  +++GLC++    +A   F EM+  G  P+
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TT+I G  K G +  A  +   M      PD VTY  L+DGFCK+G +++A +L  
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM---VGKGIKPTLVSCNTIIKGYC 356
           ++     SPN   Y  L+NG C  G V +     +E      + + P L  C +II G C
Sbjct: 460 ELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGL--CCSIIVGLC 517

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR--EENMDKAFALVSKMENQGLVPD 414
           ++G   +A     +MVSEG  PD+ +YN LING  R  E  +++AFAL+  +E  G +PD
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPD 577

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +TY  +  G C+ G +  +  +L     +G N D   YT L  G   Q  +  A     
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 475 EMLQRGFVPDDA 486
           EM+++G  PD A
Sbjct: 638 EMVRQGGAPDAA 649



 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 255/493 (51%), Gaps = 10/493 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG-VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V+ LCK    + A     EM   G V PD   +  ++    +   ++EA ++   M   
Sbjct: 195 LVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKC 254

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P    YN++I+GL K G    A +VLD ML     P   TY  L+   C+   +  A
Sbjct: 255 GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERA 314

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           EE+F  M+  G  P+ V +++LI  F+++G++  A   F EM  AG  PD + +T++I+G
Sbjct: 315 EELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDG 374

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C++G   +A K  +EM+  GC  +VVTY TI+ GL +   +  A  +   M+  G FPD
Sbjct: 375 LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPD 434

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+ G CK G +++A  L D + + S  P++  Y++L++G C  G +EK      
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKT---LD 491

Query: 300 DMISR-KISPNYISYGI---LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           D+  + K +   +  G+   +I G C  G + EA R++  MV +G KP   + N +I G 
Sbjct: 492 DLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551

Query: 356 CRSGD--ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           CRS +    +A   L  +   G  PD+++Y  L  G  +   +D+A  ++ +  ++G   
Sbjct: 552 CRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNA 611

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           DV+ Y  + TG C QG++  +  +   M+ +G  PD + Y  +ING +    L++A +F 
Sbjct: 612 DVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFF 671

Query: 474 DEMLQRGFVPDDA 486
           DEM+ +G  P  A
Sbjct: 672 DEMIGKGQKPTVA 684



 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 150/483 (31%), Positives = 244/483 (50%), Gaps = 3/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV  L K  ++  A+    +ME+ G  PD + YNT+I+   + G  +EA +++++M  K 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY  L+N LCK G  +RA+E+   M   G  P++  Y +L+    +   M EA 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM   G  PD+++ + +I    ++G  ++A   F EM   G  P+ V YT II G 
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V  A ++   M+  GC  D VTY  +L+G C+   L EA  L +E+ +    P+ 
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470

Query: 241 YTFTTLIHGHCKDGNMNKALN-LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             +++L++G C  G++ K L+ LF+     +   D     ++I G CK G +++A +++ 
Sbjct: 471 QLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQ 530

Query: 300 DMISRKISPNYISYGILINGYCSM--GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
            M+S    P+  +Y ILING C      V  AF L +++   G  P  V+   +  G C+
Sbjct: 531 RMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCK 590

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G+  +A + L +  S G + D ++Y  L  G   +  +D+A +L  +M  QG  PD   
Sbjct: 591 IGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAA 650

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y  I+ G  +  ++ D+      MI KG  P  +TYT L+       N+ EAF   + ML
Sbjct: 651 YCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESML 710

Query: 478 QRG 480
            RG
Sbjct: 711 ARG 713



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/470 (31%), Positives = 236/470 (50%), Gaps = 10/470 (2%)

Query: 22  EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC 81
           EQ G   D  TYN L+N    E    + + +   M   G+ P  F++N LI    +  R 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG-VAPDIVSFST 140
           D A    + M +    PD  T+  L+   C+     +A E+F EM   G V PD    + 
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++    +  ++  A   F +M+  G  PD + Y  +I+G  + G   EALK+ D ML K 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV   VTY  ++N LC+A  L  A++LF  M   G  P+   +T+LIHG  K G M +A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +LFD M +   +PD++T+  +IDG CK G  E+A K + +M+     PN ++Y  +I G 
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G V  AFR+   M+  G  P  V+   ++ G+C+ G   +A + L ++      P+ 
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470

Query: 381 ISYNTLINGFVR----EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
             Y++L+NG       E+ +D  F   SK   + L P +     I+ G C+ GR+ ++  
Sbjct: 471 QLYSSLVNGLCDGGSVEKTLDDLFEQ-SKAAAETLDPGLCCS--IIVGLCKTGRLDEACR 527

Query: 437 ILWRMIEKGLNPDRSTYTTLING--HVSQNNLKEAFRFHDEMLQRGFVPD 484
           I  RM+ +G  PD +TY  LING     +N ++ AF    ++ + G++PD
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPD 577



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 241/463 (52%), Gaps = 4/463 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  ++  A     EM + G  PD +T+  +I+  C+ G  E+A +    M   G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY ++I GL K GR   A  ++  M+  G  PD+ TY  LL   C+   + EA 
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM-YFREMKSAGLVPDNVLYTIIING 179
           ++  E+ +   +P++  +S+L+      G +++ L   F + K+A    D  L   II G
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVG 515

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK--MLTEADDLFNEMLERGVF 237
            C+ G + EA ++   M+ +GC  D  TYN ++NGLCR++   +  A  L +++ + G  
Sbjct: 516 LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYL 575

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+T L  G CK G +++A+ + +  + +    D+V Y  L  G C  G++++A  L
Sbjct: 576 PDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSL 635

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           + +M+ +  +P+  +Y  +ING   +  + +A + + EM+GKG KPT+ +   +++  C 
Sbjct: 636 FQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695

Query: 358 SGDASKADEFLSKMVSEGVDPDSIS-YNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           +G+  +A      M++ G    S+  Y+ LI+GF +   +D A  L   M ++G VP  +
Sbjct: 696 AGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAV 755

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           T   +  G  R G+   ++ +L  M   G  P  +T+T +++G
Sbjct: 756 TSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDG 798



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 208/444 (46%), Gaps = 39/444 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK    + A     EM + G  P+ VTY T+I    + G +  AF++M  M   G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL-------------- 106
             P   TY  L++G CK GR D A ++LDE+ +   SP+   Y++L              
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490

Query: 107 ----------------------LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
                                 +V  C+   + EA  IF  M   G  PD  +++ LI  
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 145 F--SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
              SR  +++RA     +++  G +PD V YT +  G C+ G V  A+KM +E   +G  
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DVV Y  +  GLC    +  A  LF EM+ +G  PD   +  +I+G  K   +  A   
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKF 670

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILINGYC 321
           FD M  K  KP + TY  L+   C  G +++A   +  M++R ++  + + Y  LI+G+C
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFC 730

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
               V  A +L+ +M+ +G  PT V+  ++  G  RSG   KA E L +M + G  P + 
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAA 790

Query: 382 SYNTLINGFVREENMDKAFALVSK 405
           ++  +++G  + +   K   LV +
Sbjct: 791 TFTAILDGLRKSDESGKLLKLVQE 814



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 54/111 (48%)

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G   D  +YN L+N  V E+N  + +A+  +M   G+ P+  ++N+++  F R  R  D+
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                 M  K   PD  T+  L++        ++AF    EM+  GFVP D
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 270/486 (55%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VNALCK+   ++A+MF+C++ + G   D+    +L+  +CR   L +A ++ + MS +G
Sbjct: 201 IVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREG 260

Query: 61  -LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P   +Y+ LI+GLC+ GR + A  + D+M + G  P T TY  L+   C +  + +A
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKA 320

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM  RG  P++ +++ LI    R+G+++ A    R+M   G+ P  + Y  +ING
Sbjct: 321 FNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALING 380

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC++G V+ A ++   M ++ C  +V T+N ++ GLCR     +A  L   ML+ G+ PD
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++  LI G C++G+MN A  L   M    ++PD +T+  +I+ FCK G+ + A+    
Sbjct: 441 IVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLG 500

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + IS + ++   LI+G C++G   +A  +   +V   +  T  S N I+    +  
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGC 560

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +    L K+   G+ P  ++Y TL++G +R  ++  +F ++  M+  G +P+V  Y 
Sbjct: 561 KLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYT 620

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +I+ G C+ GR+ ++E +L  M + G++P+  TYT ++ G+V+   L  A      M++R
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680

Query: 480 GFVPDD 485
           G+  +D
Sbjct: 681 GYELND 686



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 213/384 (55%), Gaps = 2/384 (0%)

Query: 89  DEMLQM-GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           DE+ ++ G   +   Y++LL+   + +    A   +  M   G    ++ + T++    +
Sbjct: 148 DELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK 207

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG-CVMDVV 206
           NG  + A M+  ++   G + D+ + T ++ G+CR   + +ALK+ D M  +G C  + V
Sbjct: 208 NGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSV 267

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           +Y+ +++GLC    L EA  L ++M E+G  P   T+T LI   C  G ++KA NLFD M
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             +  KP++ TY  LIDG C+ G++E+AN +   M+   I P+ I+Y  LINGYC  G V
Sbjct: 328 IARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRV 387

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             AF L   M  +  KP + + N +++G CR G   KA   L +M+  G+ PD +SYN L
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G  RE +M+ A+ L++ M +  L PD +T+  I+  FC+QG+   +   L  M+ KG+
Sbjct: 448 IDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507

Query: 447 NPDRSTYTTLINGHVSQNNLKEAF 470
           + D  T TTLI+G  +    ++A 
Sbjct: 508 SLDEVTGTTLIDGVCNVGKTRDAL 531



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 245/525 (46%), Gaps = 43/525 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  +++ A     +M +KG  P T TY  LI A C  G +++AF L + M  +G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG 331

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY  LI+GLC+ G+ + A  V  +M++ G+ P   TYN L+   C+   +  A 
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAF 391

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M +R   P++ +F+ L+    R G+  +A+   + M   GL PD V Y ++I+G 
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A K+   M       D +T+  I+N  C+      A      ML +G+  D 
Sbjct: 452 CREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQK------------------------------- 269
            T TTLI G C  G    AL + + + +                                
Sbjct: 512 VTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGK 571

Query: 270 ----SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                + P +VTY TL+DG  + G++  + ++   M      PN   Y I+ING C  G 
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGR 631

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V EA +L   M   G+ P  V+   ++KGY  +G   +A E +  MV  G + +   Y++
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691

Query: 386 LINGFV------REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           L+ GFV      RE + +    L+S +E  G     +    ++T  C++GR  +S  ++ 
Sbjct: 692 LLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCI-FLVTRLCKEGRTDESNGLVQ 750

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +++ G+  +++    ++  + S+    +       +L+ GFVP 
Sbjct: 751 TILKSGVFLEKAI-DIIMESYCSKKKHTKCVELITLVLKSGFVPS 794



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 245/483 (50%), Gaps = 8/483 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+D KI+ A     +M + G++P  +TYN LIN YC++G +  AF+L+  M  + 
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V T+N L+ GLC+ G+  +A  +L  ML  GLSPD  +YN L+   CR+ +M+ A 
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAY 461

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M+   + PD ++F+ +I  F + G+ D A  +   M   G+  D V  T +I+G 
Sbjct: 462 KLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   +AL + + +++   +    + N IL+ L +   L E   +  ++ + G+ P  
Sbjct: 522 CNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSV 581

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTL+ G  + G+++ +  + ++M      P++  Y  +I+G C+ G +E+A KL + 
Sbjct: 582 VTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC---- 356
           M    +SPN+++Y +++ GY + G +  A      MV +G +      +++++G+     
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQK 701

Query: 357 --RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             R  D     E +S +   G     +    L+    +E   D++  LV  +   G+  +
Sbjct: 702 GIRETDPECIKELISVVEQLGGSTSGLCI-FLVTRLCKEGRTDESNGLVQTILKSGVFLE 760

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
               ++I+  +C + +      ++  +++ G  P   ++  +I G   + + + A     
Sbjct: 761 K-AIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVM 819

Query: 475 EML 477
           E+L
Sbjct: 820 ELL 822



 Score = 45.1 bits (105), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 47/98 (47%)

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y++L+    + +    A+    +ME  G V  +I Y  I+   C+ G    +E+ + +++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL 222

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + G   D    T+L+ G     NL++A +  D M + G
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREG 260


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 256/457 (56%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +N +++++ +      A  L + +  KG++P + T N LIN  C  G+      V
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L+ G  PDT T NTL+   C K  + +A     ++  +G   + VS++TLI    +
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+   R++      P+  +Y+ II+  C+   V EA  +  EM  KG   DVVT
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T++ G C    L EA  L NEM+ + + P+ YT+  L+   CK+G + +A ++  +M 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  +KPD++TY+TL+DG+  V E++KA  ++  M    ++P+  +Y ILING+C    V 
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+ EM  K + P +V+ +++I G C+SG      + + +M   G   D I+Y++LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  +  ++D+A AL +KM++Q + P++ T+ ++L G C+ GR+ D++ +   ++ KG +
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  TY  +INGH  Q  L+EA     +M   G +P+
Sbjct: 477 LNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513



 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 147/447 (32%), Positives = 252/447 (56%), Gaps = 2/447 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I      L ++ ++G  PDTVT NTLI   C +G +++A    + +  +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +LING+CK G    A ++L ++      P+   Y+T++   C+ + +SEA 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ +G++ D+V++STLI  F   G+L  A+    EM    + P+   Y I+++  
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 181 CRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G V EA  +   ML K CV  DV+TY+T+++G      + +A  +FN M   GV PD
Sbjct: 280 CKEGKVKEAKSVLAVML-KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+T LI+G CK+  +++ALNLF  M QK++ P IVTY++LIDG CK G +     L  
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R    + I+Y  LI+G C  GH+  A  L+ +M  + I+P + +   ++ G C+ G
Sbjct: 399 EMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGG 458

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A E    ++++G   +  +YN +ING  ++  +++A  ++SKME+ G +P+  T+ 
Sbjct: 459 RLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFE 518

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGL 446
            I+    ++     +E +L +MI +GL
Sbjct: 519 TIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 245/463 (52%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            +E KG+ PD +T N LIN +C  G +   F ++  +  +G  P   T N+LI GLC KG
Sbjct: 84  RLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A    D++L  G   +  +Y TL+   C+  +   A ++  ++  R   P++  +S
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYS 203

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    +   +  A   F EM   G+  D V Y+ +I G+C  G + EA+ + +EM+ K
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               +V TYN +++ LC+   + EA  +   ML+  V PD  T++TL+ G+     + KA
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            ++F+ M+   + PD+ TY  LI+GFCK   +++A  L+ +M  + + P  ++Y  LI+G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G +   + L  EM  +G    +++ +++I G C++G   +A    +KM  + + P+
Sbjct: 384 LCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             ++  L++G  +   +  A  +   +  +G   +V TYNV++ G C+QG + ++  +L 
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLS 503

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +M + G  P+  T+ T+I     ++   +A +   +M+ RG +
Sbjct: 504 KMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 211/403 (52%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D A    + ML M  +P    +N +L    + ++ S A  +   +  +G+ PD+++ + L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F   GQ+        ++   G  PD V    +I G C  G V +AL   D++L +G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
            ++ V+Y T++NG+C+      A  L  ++  R   P+   ++T+I   CK   +++A  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           LF  MT K I  D+VTY+TLI GFC  G++++A  L  +M+ + I+PN  +Y IL++  C
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G V EA  +   M+   +KP +++ +T++ GY    +  KA    + M   GV PD  
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y  LINGF + + +D+A  L  +M  + +VP ++TY+ ++ G C+ GR+     ++  M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++G   D  TY++LI+G     +L  A    ++M  +   P+
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 195/372 (52%), Gaps = 2/372 (0%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           +N+ +A   F  M      P I+ F+ ++  F++      A+     ++  G+ PD +  
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            I+IN +C  G +     +  ++L++G   D VT NT++ GLC    + +A    +++L 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           +G   +  ++ TLI+G CK G+   A+ L   +  +  KP++  Y+T+ID  CK   + +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L+++M  + IS + ++Y  LI G+C  G + EA  L  EMV K I P + + N ++ 
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C+ G   +A   L+ M+   V PD I+Y+TL++G+     + KA  + + M   G+ P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 414 DVITYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           DV TY +++ GFC+  +M D  L L++ M +K + P   TY++LI+G      +   +  
Sbjct: 338 DVHTYTILINGFCKN-KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 473 HDEMLQRGFVPD 484
            DEM  RG   D
Sbjct: 397 IDEMRDRGQPAD 408



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 71/138 (51%)

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
           S+ +V +A   +  M+     P ++  N I+  + +    S A     ++  +G+ PD I
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           + N LIN F     +   F++++K+  +G  PD +T N ++ G C +G++  +     ++
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 442 IEKGLNPDRSTYTTLING 459
           + +G   ++ +Y TLING
Sbjct: 156 LAQGFQLNQVSYATLING 173


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 255/484 (52%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC  ++ + A  + L  M + G  P+ V+Y+ ++ A C     + A  L+  M+ +
Sbjct: 198 LLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQ 257

Query: 60  G--LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V  Y+++I+G   +G   +A  +  EM + G+ PD  TYN ++   C+   M 
Sbjct: 258 GGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +AE +  +M+  G  PD V++S +I  ++  G+L  A   FREMK  GL+P+ V     +
Sbjct: 318 KAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFL 377

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
              C++G   EA +  D M  KG   D+ +Y T+L+G        +   LFN M   G+ 
Sbjct: 378 ASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIA 437

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            + + FT LIH + K G ++ A+ +F  M Q+ + PD+VTY+T+I  F ++G +  A + 
Sbjct: 438 ANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEK 497

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI-KPTLVSCNTIIKGYC 356
           +  M++R I PN   Y  +I G+C  G + +A  L  EM+ KGI +P +V  +++I   C
Sbjct: 498 FNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLC 557

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G    A +        G  P  I++N+LI+G+     MDKAF ++  ME  G+ PD++
Sbjct: 558 KDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIV 617

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN +L G+ + GR++D   +   M  KG+ P+  TY  ++ G         A +   EM
Sbjct: 618 TYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677

Query: 477 LQRG 480
           ++ G
Sbjct: 678 IESG 681



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 255/484 (52%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK   +D A++ L +M   G  PDTVTY+ +I+ Y   G L+EA ++   M  +G
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRG 365

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + T NS +  LCK GR   A E  D M   G  PD  +Y TLL     +   ++  
Sbjct: 366 LIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMI 425

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M   G+A +   F+ LI  +++ G +D A++ F EM+  G+ PD V Y+ +I+ +
Sbjct: 426 GLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTF 485

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV-FPD 239
            R G + +A++  ++M+ +G   +   Y++I+ G C    L +A +L +EM+ +G+  PD
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F+++I+  CKDG +  A ++FD+ T    +P ++T+N+LIDG+C VG+M+KA K+  
Sbjct: 546 IVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILD 605

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M    + P+ ++Y  L++GY   G + +   L+ EM  KG+KP  V+   ++ G  R+G
Sbjct: 606 AMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A +   +M+  G       Y  ++ G  R    D+A  L  K+    +   +   N
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++    +  R  +++ +   +   GL P+ STY  +I   +    +++A      M + 
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKS 785

Query: 480 GFVP 483
           G VP
Sbjct: 786 GIVP 789



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 246/468 (52%), Gaps = 1/468 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM ++GV PD VTYN +I+A C+   +++A  ++  M+  G +P   TY+ +I+G    G
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLG 349

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A ++  EM + GL P+  T N+ L   C+     EA E F  M+ +G  PDI S+ 
Sbjct: 350 RLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYC 409

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  ++  G     +  F  MKS G+  +  ++TI+I+ Y + G V +A+ +  EM ++
Sbjct: 410 TLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQ 469

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   DVVTY+T+++   R   LT+A + FN+M+ RG+ P+   ++++I G C  G + KA
Sbjct: 470 GVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKA 529

Query: 260 LNLFDIMTQKSI-KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
             L   M  K I +PDIV ++++I+  CK G +  A+ ++         P  I++  LI+
Sbjct: 530 KELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLID 589

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           GYC +G + +AF++   M   G++P +V+ NT++ GY ++G  +       +M  +GV P
Sbjct: 590 GYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKP 649

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           ++++Y  ++ G  R      A     +M   G    V  Y +IL G CR     ++ ++ 
Sbjct: 650 NTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILF 709

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            ++    +    +   T+IN        +EA      +   G +P+++
Sbjct: 710 QKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNES 757



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 208/421 (49%), Gaps = 16/421 (3%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE--------AEEIFCEMSR----- 128
           D A  + DE+ +        + N  L    R  + S         A  +F  + R     
Sbjct: 91  DDAHHMFDELFRQATPVPGRSLNGFLAALARATSSSACITDGPALALALFNRVCREEAGT 150

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           +   P   +++ L+    R  + D  L  F  +   GL  D +    ++   C      E
Sbjct: 151 QVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEE 210

Query: 189 ALK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG--VFPDFYTFTT 245
           A+  +   M E GCV + V+Y+ +L  LC   M   A DL   M ++G    PD   ++T
Sbjct: 211 AVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYST 270

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           +IHG   +G   KA +LF  MT++ +KPD+VTYN +ID  CK   M+KA  +   M +  
Sbjct: 271 VIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDG 330

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ ++Y  +I+GY ++G + EA +++ EM  +G+ P +V+CN+ +   C+ G + +A 
Sbjct: 331 AQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAA 390

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           EF   M ++G  PD  SY TL++G+  E        L + M++ G+  +   + +++  +
Sbjct: 391 EFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAY 450

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            ++G + D+ LI   M ++G++PD  TY+T+I+       L +A    ++M+ RG  P+ 
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNT 510

Query: 486 A 486
           A
Sbjct: 511 A 511



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 213/394 (54%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K   +D A +   EM+Q+GV PD VTY+T+I+ + R G L +A +  N M  +G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG 505

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKENMSEA 119
           ++P    Y+S+I G C  G   +AKE++ EM+  G+  PD   +++++   C+   + +A
Sbjct: 506 IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDA 565

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +IF   +  G  P +++F++LI  +   G++D+A      M+  G+ PD V Y  +++G
Sbjct: 566 HDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDG 625

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y +NG + + L +  EM  KG   + VTY  +L GL RA     A   F+EM+E G    
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT 685

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  ++ G C++   ++A+ LF  +   ++K  I   NT+I+   KV   E+A +L+A
Sbjct: 686 VSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFA 745

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +YG++I      G V +A  ++  M   GI P     N II+     G
Sbjct: 746 TISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           + +KA  +LSK+  + +  ++ + + +++ F R+
Sbjct: 806 EIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRK 839



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 207/466 (44%), Gaps = 36/466 (7%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LCK  +   A  F   M  KG  PD  +Y TL++ Y  EG   +   L NSM   G+  
Sbjct: 379 SLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAA 438

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
               +  LI+   K+G  D A  +  EM Q G+SPD  TY+T++    R   +++A E F
Sbjct: 439 NCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKF 498

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV-PDNVLYTIIINGYCR 182
            +M  RG+ P+   +S++I  F  +G L +A     EM + G+  PD V ++ +IN  C+
Sbjct: 499 NQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCK 558

Query: 183 NGFVLEA-----------------------------------LKMRDEMLEKGCVMDVVT 207
           +G V++A                                    K+ D M   G   D+VT
Sbjct: 559 DGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVT 618

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT+L+G  +   + +   LF EM  +GV P+  T+  ++ G  + G    A   F  M 
Sbjct: 619 YNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMI 678

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +      +  Y  ++ G C+    ++A  L+  + +  +  +      +IN    +    
Sbjct: 679 ESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKE 738

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+  +   G+ P   +   +I    + G    A+   S M   G+ P S   N +I
Sbjct: 739 EAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRII 798

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
              + +  + KA   +SK++ + ++ +  T +++L+ F R+G+  +
Sbjct: 799 RMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQE 844



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 169/334 (50%), Gaps = 1/334 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   C    +  AK  + EM  KG+  PD V ++++IN+ C++G + +A  + +  +  
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDI 575

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +PGV T+NSLI+G C  G+ D+A ++LD M  +G+ PD  TYNTLL    +   +++ 
Sbjct: 576 GERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDG 635

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM R+GV P+ V++  ++    R G+   A   F EM  +G      +Y II+ G
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGG 695

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CRN    EA+ +  ++        +   NT++N + + +   EA +LF  +   G+ P+
Sbjct: 696 LCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPN 755

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +I    KDG +  A N+F  M +  I P     N +I    + GE+ KA    +
Sbjct: 756 ESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLS 815

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
            +  ++I     +  ++++ +   G   E  +L 
Sbjct: 816 KVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 260/468 (55%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           F  ++E  G+  +  T N +IN +CR      A+ ++  +   G +P   T+N+LI GL 
Sbjct: 100 FCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLF 159

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
            +G+   A  ++D M++ G  PD  TYN+++   CR  + S A ++  +M  R V  D+ 
Sbjct: 160 LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 219

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++ST+I    R+G +D A+  F+EM++ G+    V Y  ++ G C+ G   +   +  +M
Sbjct: 220 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 279

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           + +  V +V+T+N +L+   +   L EA++L+ EM+ RG+ P+  T+ TL+ G+C    +
Sbjct: 280 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 339

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A N+ D+M +    PDIVT+ +LI G+C V  ++   K++ ++  R +  N ++Y IL
Sbjct: 340 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 399

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + G+C  G +  A  L+ EMV  G+ P +++   ++ G C +G   KA E    +    +
Sbjct: 400 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
           D   + Y T+I G  +   ++ A+ L   +  +G+ P+V+TY V+++G C++G + ++ +
Sbjct: 460 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 519

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +L +M E G  P+  TY TLI  H+   +L  + +  +EM   GF  D
Sbjct: 520 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 567



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 258/458 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K   A   L ++ + G  PDT T+NTLI     EG + EA  L++ M   G
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 178

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYNS++NG+C+ G    A ++L +M +  +  D  TY+T++   CR   +  A 
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+   +V++++L+    + G+ +   +  ++M S  +VP+ + + ++++ +
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA ++  EM+ +G   +++TYNT+++G C    L+EA+++ + M+     PD 
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 358

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFT+LI G+C    ++  + +F  ++++ +  + VTY+ L+ GFC+ G+++ A +L+ +
Sbjct: 359 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 418

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++YGIL++G C  G + +A  ++ ++    +   +V   TII+G C+ G 
Sbjct: 419 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 478

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      +  +GV P+ ++Y  +I+G  ++ ++ +A  L+ KME  G  P+  TYN 
Sbjct: 479 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 538

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++    R G +  S  ++  M   G + D S+   +I+
Sbjct: 539 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 184/441 (41%), Gaps = 91/441 (20%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+  KI  A+    EM   GV PD +TY  L++  C  G LE+A ++   +    
Sbjct: 399 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 458

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +  G+  Y ++I G+CK G+ + A  +   +   G+ P+  TY  ++   C+K ++SEA 
Sbjct: 459 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 518

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN-- 178
            +  +M   G AP+  +++TLI    R+G L  +     EMKS G   D     ++I+  
Sbjct: 519 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578

Query: 179 ---------GYCRNGFVLEALKMRDEMLEKG-------------------CVMDVVTYNT 210
                     YC    + +  K R ++LE                      +   +  NT
Sbjct: 579 LSAMKRLTLRYC----LSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNT 634

Query: 211 I-------------LNGLCRAKMLTEADD------LFNEMLERGV-------FPDFYTFT 244
           I             L  L R+ +L +  +      + NE+L  G+         D    T
Sbjct: 635 IEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPT 694

Query: 245 TLIHGHCKDGNMNK---------ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             +H   + G M +         A  L   M Q+ I P+ +TY++LIDGFCK   +++AN
Sbjct: 695 DAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEAN 754

Query: 296 KLWADMISRKISP-NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
           ++   M+++  S   Y+  G++       G  TE    W  +      P  +SC+T    
Sbjct: 755 QMLDLMVTKGDSDIRYLLAGLMRKK--RKGSETEG---WENL------PDDLSCST---- 799

Query: 355 YCRSGDASKADEFLSKMVSEG 375
                 AS++  F S    EG
Sbjct: 800 ------ASRSSNFRSHFSLEG 814



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 115/223 (51%), Gaps = 1/223 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   ++D        + ++G+  + VTY+ L+  +C+ G ++ A +L   M   G
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY  L++GLC  G+ ++A E+ +++ +  +      Y T++   C+   + +A 
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 483

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +FC +  +GV P++++++ +I    + G L  A +  R+M+  G  P++  Y  +I  +
Sbjct: 484 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA-KMLT 222
            R+G +  + K+ +EM   G   D  +   +++ L  A K LT
Sbjct: 544 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLT 586



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A+E   +M+  G+ P++I+Y++LI+GF +E  +D+A  ++  M  +G     I Y  +L 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG--DSDIRY--LLA 773

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           G  R+ R   SE   W  +   L+   ++ ++    H S
Sbjct: 774 GLMRKKR-KGSETEGWENLPDDLSCSTASRSSNFRSHFS 811



 Score = 38.5 bits (88), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 33/54 (61%)

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           R+  +  A  L  +M  +G+ P+ ITY+ ++ GFC++ R+ ++  +L  M+ KG
Sbjct: 711 RKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 153/480 (31%), Positives = 264/480 (55%), Gaps = 8/480 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK  +I  A+    EM Q+ + P+TVTYNTLI+ YC+ G +EEA      M  + 
Sbjct: 198 VLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQN 257

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  + TYNSL+NGLC  GR D A+EVL EM   G  P    + + + +     N +  +
Sbjct: 258 VECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLP--GGFLSFVFDD--HSNGAGDD 313

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F     + +  D  ++  L+    R G++++A     ++   G+ P  + Y I++N Y
Sbjct: 314 GLF---DGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAY 370

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A+   ++M E+G   + +T+NT+++  C    +  A+     M+E+GV P  
Sbjct: 371 CQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTV 430

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI+G+ + G+  +     D M +  IKP++++Y +LI+  CK  ++  A  + AD
Sbjct: 431 ETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLAD 490

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI R +SPN   Y +LI   CS+  + +AFR + EM+  GI  TLV+ NT+I G  R+G 
Sbjct: 491 MIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGR 550

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA++   +M  +G +PD I+YN+LI+G+ +  N  K   L  KM+  G+ P V T++ 
Sbjct: 551 VKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHP 610

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   CR+  +   + +   M++  L PD+  Y  +I  +    N+ +A   H +M+ +G
Sbjct: 611 LIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQG 669



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 243/462 (52%), Gaps = 13/462 (2%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G  PD V Y   + A      L++ F+LM SM   G+ P VF YN ++ GLCK  R   A
Sbjct: 152 GTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDA 211

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           +++ DEM+Q  + P+T TYNTL+   C+   + EA      M  + V  ++V++++L+  
Sbjct: 212 RKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNG 271

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTII---INGYCRNGFVLEALKMRDEMLEKGC 201
              +G++D A     EM+ +G +P   L  +     NG   +G + +  ++R        
Sbjct: 272 LCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDG-LFDGKEIR-------- 322

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
            +D  TY  +LNGLCR   + +A+++  +++E GV P   ++  L++ +C++G++ KA+ 
Sbjct: 323 -IDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAIL 381

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
             + M ++ ++P+ +T+NT+I  FC+ GE++ A      M+ + +SP   +Y  LINGY 
Sbjct: 382 TTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYG 441

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             GH    F    EM   GIKP ++S  ++I   C+      A+  L+ M+  GV P++ 
Sbjct: 442 QKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAE 501

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            YN LI        +  AF    +M   G+   ++TYN ++ G  R GR+  +E +  +M
Sbjct: 502 IYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQM 561

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             KG NPD  TY +LI+G+    N ++    +D+M   G  P
Sbjct: 562 AGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKP 603



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 244/447 (54%), Gaps = 1/447 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+  +I+ A+  L ++ + GV P  ++YN L+NAYC+EG +++A      M  +G
Sbjct: 331 LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERG 390

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P   T+N++I+  C+ G  D A+  +  M++ G+SP   TYN+L+    +K +     
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCF 450

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   EM + G+ P+++S+ +LI    ++ +L  A +   +M   G+ P+  +Y ++I   
Sbjct: 451 EFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEAS 510

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + +A +  DEM++ G    +VTYNT++NGL R   + +A+DLF +M  +G  PD 
Sbjct: 511 CSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDV 570

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G+ K  N  K L L+D M    IKP + T++ LI   C+   +   +K++ +
Sbjct: 571 ITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQE 629

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P+   Y  +I  Y   G+V +A  L  +MV +G+    V+ N++I  Y R   
Sbjct: 630 MLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRR 689

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+    +  M ++G+ P   +YN LI G    ++ + A+    +M  +GL+ +V     
Sbjct: 690 VSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQ 749

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLN 447
           +++G   +G + +++++   +   GLN
Sbjct: 750 LISGLREEGMLREAQIVSSELSIGGLN 776



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 228/467 (48%), Gaps = 28/467 (5%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L+EA  L ++M   G  P   + N L+  L      ++   V  +++  G  PD   Y  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
            +  +   +++ +  E+   M + G+ P + +++ ++G   +  ++  A   F EM    
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           +VP+ V Y  +I+GYC+ G + EAL  ++ M E+    ++VTYN++LNGLC +  + +A 
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282

Query: 226 DLFNEMLERGVFP----------------------------DFYTFTTLIHGHCKDGNMN 257
           ++  EM   G  P                            D  T+  L++G C+ G + 
Sbjct: 283 EVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIE 342

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           KA  +   + +  + P  ++YN L++ +C+ G+++KA      M  R + PN I++  +I
Sbjct: 343 KAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVI 402

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           + +C  G V  A      MV KG+ PT+ + N++I GY + G   +  EFL +M   G+ 
Sbjct: 403 SKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIK 462

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+ ISY +LIN   ++  +  A  +++ M  +G+ P+   YN+++   C   ++ D+   
Sbjct: 463 PNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRF 522

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              MI+ G++    TY TLING      +K+A     +M  +G  PD
Sbjct: 523 FDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 145/295 (49%), Gaps = 28/295 (9%)

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
           +KML EA DL++ M + G  P   +   L+       +  K L +F  +     +PD V 
Sbjct: 100 SKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVA 159

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           Y   +     + +++K  +L   M+   + P+  +Y +++ G C +  + +A +L+ EM+
Sbjct: 160 YGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMI 219

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            + + P  V+ NT+I GYC+ G   +A  F  +M  + V+ + ++YN+L+NG      +D
Sbjct: 220 QRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVD 279

Query: 398 KAFALVSKMENQGLVP----------------------------DVITYNVILTGFCRQG 429
            A  ++ +ME  G +P                            D  TY ++L G CR G
Sbjct: 280 DAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVG 339

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           R+  +E +L +++E G+ P + +Y  L+N +  + ++K+A    ++M +RG  P+
Sbjct: 340 RIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPN 394


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 165/531 (31%), Positives = 271/531 (51%), Gaps = 47/531 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV  LCK+ K++     + +   +G  P+ V YNTLI+ YC++G  E A  L   +  KG
Sbjct: 178 MVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKG 237

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS----------------------- 97
             P V TY ++ING CKKG+ +   ++L EM + GL                        
Sbjct: 238 FLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAA 297

Query: 98  ------------PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                       PD ATYN L+  SC    + +AE++  +  +RG+ P+ VS++ LI  +
Sbjct: 298 DTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNY 357

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G+  RAL    +M   G  PD V Y  +I+G    G V  AL +R++M+EKG + D 
Sbjct: 358 CKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDA 417

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN +++GLC+   L  A  L  EML++ V PD +   TL+ G  + G+  +A  LF++
Sbjct: 418 NIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFEL 477

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
             +K I P +V YN +I G+CK G M+ A   +  MI    SP+  +Y  +I+GY  M  
Sbjct: 478 TIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMND 537

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A R++  MV    KP +V+   +I G+C SGD ++A++   +M+S  + P+ ++Y  
Sbjct: 538 LHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTI 597

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC---------RQGRMHDSEL 436
           LI  F +  N+ KA +   +M  +  +P+ +TYN ++ G           ++    ++ L
Sbjct: 598 LIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSL 657

Query: 437 ILWR---MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +L     MI  G +   ++Y +++        +K A    D+M+ +GF+PD
Sbjct: 658 VLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPD 708



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 248/486 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K++ A     EM  +    D  T   ++   C+EG +E+ ++L+    G+G
Sbjct: 143 LLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRG 202

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +  YN+LI+G CKKG  +RA  +  E+   G  P   TY  ++   C+K      +
Sbjct: 203 CMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVD 262

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS RG+   I  ++ +I    ++G    A      M  +G  PD   Y I+I G 
Sbjct: 263 KLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGS 322

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A ++ ++ +++G + + V+Y  +++  C+      A DL  +M ERG  PD 
Sbjct: 323 CSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDL 382

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LIHG    G ++ AL + + M +K + PD   YN L+ G CK G +  A  L A+
Sbjct: 383 VTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAE 442

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + ++P+      L++G+   G   EA +L+   + KGI P +V  N +IKGYC+ G 
Sbjct: 443 MLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGM 502

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M+     PD  +Y+T+I+G+++  ++  A  +   M      P+V+TY +
Sbjct: 503 MKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTL 562

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC  G ++ +E    +M+   L P+  TYT LI       NL +A  F ++ML   
Sbjct: 563 LINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEK 622

Query: 481 FVPDDA 486
            +P+D 
Sbjct: 623 CLPNDV 628



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 240/465 (51%), Gaps = 1/465 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS-MSGKGLKPGVFTYNSLINGLCKKG 79
           M+ K + P    ++ +I+ +   G ++ A +   + +      P VF+ NSL+N L K G
Sbjct: 92  MKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHG 151

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + + A +V DEM+      D  T   ++   C++  + +  ++  +   RG  P+IV ++
Sbjct: 152 KVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYN 211

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TLI  + + G  +RA + F+E+K  G +P    Y  IING+C+ G      K+  EM E+
Sbjct: 212 TLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSER 271

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  + +  YN I++   +     EA D    M++ G  PD  T+  LI G C  G ++KA
Sbjct: 272 GLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKA 331

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             L +   ++ + P+ V+Y  LI  +CK GE  +A  L   M  R   P+ ++Y  LI+G
Sbjct: 332 EQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHG 391

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
               G V  A  +  +MV KG+ P     N ++ G C+ G    A   L++M+ + V PD
Sbjct: 392 LIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPD 451

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +    TL++GF+R  + ++A  L      +G+ P V+ YN ++ G+C+ G M D+ L   
Sbjct: 452 AFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFK 511

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           RMI+   +PD  TY+T+I+G++  N+L  A R    M++    P+
Sbjct: 512 RMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPN 556



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 223/459 (48%), Gaps = 18/459 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   ++  A+  L +  ++G+ P+ V+Y  LI+ YC++G    A  L+  MS +G
Sbjct: 318 LITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERG 377

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + TY +LI+GL   G  D A  V ++M++ G+ PD   YN L+   C+K  +  A+
Sbjct: 378 HKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAK 437

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  + VAPD    +TL+  F R+G  + A   F      G+ P  V Y  +I GY
Sbjct: 438 VLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGY 497

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +AL     M++     D  TY+TI++G  +   L  A  +F  M++    P+ 
Sbjct: 498 CKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNV 557

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI+G C  G++N+A   F  M    +KP++VTY  LI  FCK   + KA   +  
Sbjct: 558 VTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQ 617

Query: 301 MISRKISPNYISYGILINGYCSM---------------GHVTEAFRLWYEMVGKGIKPTL 345
           M+  K  PN ++Y  L+NG  +                  V E+F +   M+  G     
Sbjct: 618 MLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGM---MISDGWDRRA 674

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            S N+I+   C+      A     KM+S+G  PD +S   L++G   E        ++S 
Sbjct: 675 ASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISC 734

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             N+  +   + Y+  L  F  QG+  ++ LIL  + ++
Sbjct: 735 KLNERELQVAVKYSEKLDAFLSQGQTSEASLILHSLADQ 773



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 38/261 (14%)

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS-RKISPNYISYGILING 319
           +L  IM  K + P    ++ +I  F   G +++A + +   I      P+  S   L+N 
Sbjct: 87  SLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNV 146

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
               G V  A +++ EMV +  +    +   ++KG C+ G      + + K    G  P+
Sbjct: 147 LVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPN 206

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG---------- 429
            + YNTLI+G+ ++ + ++A  L  +++ +G +P V TY  I+ GFC++G          
Sbjct: 207 IVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLV 266

Query: 430 --------------------------RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
                                     R+  ++ + W MI+ G +PD +TY  LI G  S 
Sbjct: 267 EMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGW-MIKSGCDPDMATYNILITGSCSC 325

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
             + +A +  ++ ++RG +P+
Sbjct: 326 GEVHKAEQLLEQAIKRGLLPN 346


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 164/520 (31%), Positives = 270/520 (51%), Gaps = 38/520 (7%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +NA CK  ++  A    C+ME  GV+P+ VTYN +I+   + G  EEA +  + M    +
Sbjct: 262 INAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKV 321

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P V TY  LI+GL K    + A EVL EM  MG +P+   +N L+   CRK +M EA  
Sbjct: 322 NPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALR 381

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL-VPDNVLYTIIINGY 180
           +  EM+ +G+ P+ V+F+TL+  F R+ Q+++A      + S+GL V  +V   +I    
Sbjct: 382 VRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLM 441

Query: 181 CRNGFVLEALKMRDEMLE------------------------------------KGCVMD 204
            R+GFV  ALK+  ++L                                     KG   +
Sbjct: 442 ERSGFV-SALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAAN 500

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            VT N +L+GLC    + E  ++  +MLE+G+  D  ++ TLI G CK G + +A  L +
Sbjct: 501 TVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKE 560

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M Q+  +PD  TYN L+ G   +G+++  ++L  +       PN  +Y +L+ GYC   
Sbjct: 561 EMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKAD 620

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A + +  +  + ++ + V  N +I  YCR G+ ++A +    M S G+ P   +Y+
Sbjct: 621 RIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYS 680

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           +LI+G      +D+A  +  +M N+GL+P+V  Y  ++ G C+ G+M     IL  M   
Sbjct: 681 SLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSN 740

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G+ P++ TYT +I+G+    N+KEA    +EM++ G  PD
Sbjct: 741 GIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPD 780



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 236/465 (50%), Gaps = 2/465 (0%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           ++GV+P   T N L+++  +   L +++++ + ++ +G+ P VFT+ + IN  CK GR  
Sbjct: 214 KRGVFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVG 272

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A ++  +M  +G+ P+  TYN ++    +     EA      M R  V P +V++  LI
Sbjct: 273 DAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLI 332

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               +    + A     EM S G  P+ V++  +I+GYCR G + EAL++RDEM  KG  
Sbjct: 333 SGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMK 392

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            + VT+NT+L G CR+  + +A+ +   +L  G+  +    + +IH   +      AL +
Sbjct: 393 PNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKI 452

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISYGILINGYC 321
              +   +I+        L+ G CK     +A +LW  + + K ++ N ++   L++G C
Sbjct: 453 VTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLC 512

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G++ E F +  +M+ KG+    +S NT+I G C+ G   +A +   +MV +   PD+ 
Sbjct: 513 ERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTY 572

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +YN L+ G      +D    L+ + +  G VP+V TY ++L G+C+  R+ D+      +
Sbjct: 573 TYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNL 632

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             + +      Y  LI  +    N+ EAF+  D M  RG +P  A
Sbjct: 633 DYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCA 677



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 227/441 (51%), Gaps = 40/441 (9%)

Query: 71  LINGLCKKGRCDRAKEVLDEML---QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           L++ LC + +C  ++   D  +   + G+ P   T N LL    +   + ++ E+F +++
Sbjct: 189 LLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLA 247

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
            +GVAPD+ +F+T I  F + G++  A+  F +M+  G+ P+ V Y  +I+G  ++G   
Sbjct: 248 CQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFE 307

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EAL+ +D M+       VVTY  +++GL + +M  EA+++  EM   G  P+   F  LI
Sbjct: 308 EALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALI 367

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G+C+ G+M +AL + D M  K +KP+ VT+NTL+ GFC+  +ME+A ++   ++S  +S
Sbjct: 368 DGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLS 427

Query: 308 PN--YISYGI---------------------------------LINGYCSMGHVTEAFRL 332
            N    SY I                                 L+ G C     +EA  L
Sbjct: 428 VNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIEL 487

Query: 333 WYEMVG-KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           W+++   KG+    V+ N ++ G C  G+  +  E L +M+ +G+  D ISYNTLI G  
Sbjct: 488 WFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCC 547

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   +++AF L  +M  Q   PD  TYN ++ G    G++ D   +L    E G  P+  
Sbjct: 548 KWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVY 607

Query: 452 TYTTLINGHVSQNNLKEAFRF 472
           TY  L+ G+   + +++A +F
Sbjct: 608 TYALLLEGYCKADRIEDAVKF 628



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 186/328 (56%), Gaps = 1/328 (0%)

Query: 1   MVNALCK-DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V  LCK +   ++ +++      KG+  +TVT N L++  C  G +EE F+++  M  K
Sbjct: 471 LVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEK 530

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL     +YN+LI G CK G+ + A ++ +EM+Q    PDT TYN L+        + + 
Sbjct: 531 GLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDV 590

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  E    G  P++ +++ L+  + +  +++ A+ +F+ +    +   +V+Y I+I  
Sbjct: 591 HRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAA 650

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YCR G V EA K+RD M  +G +    TY+++++G+C    + EA ++F EM   G+ P+
Sbjct: 651 YCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPN 710

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            + +T LI GHCK G M+   ++   M+   I+P+ +TY  +IDG+CK+G M++A +L  
Sbjct: 711 VFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLN 770

Query: 300 DMISRKISPNYISYGILINGYCSMGHVT 327
           +MI   I+P+ ++Y  L  GYC    +T
Sbjct: 771 EMIRNGIAPDTVTYNALQKGYCKERELT 798



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 191/354 (53%), Gaps = 1/354 (0%)

Query: 36  LINAYCREGFLEEAFQLMNSMSG-KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
           L+   C+     EA +L   ++  KGL     T N+L++GLC++G  +   EVL +ML+ 
Sbjct: 471 LVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEK 530

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           GL  D  +YNTL+   C+   + EA ++  EM ++   PD  +++ L+   +  G++D  
Sbjct: 531 GLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDV 590

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
                E K  G VP+   Y +++ GYC+   + +A+K    +  +   +  V YN ++  
Sbjct: 591 HRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAA 650

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
            CR   +TEA  L + M  RG+ P   T+++LIHG C  G +++A  +F+ M  + + P+
Sbjct: 651 YCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPN 710

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
           +  Y  LI G CK+G+M+    +  +M S  I PN I+Y I+I+GYC +G++ EA  L  
Sbjct: 711 VFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLN 770

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           EM+  GI P  V+ N + KGYC+  + +   +   K        + I+YNTLI+
Sbjct: 771 EMIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTLIH 824



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 35/190 (18%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +I+ A  F   ++ + V   +V YN LI AYCR G + EAF+L ++M  +G
Sbjct: 612 LLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRG 671

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEM----------------------------- 91
           + P   TY+SLI+G+C  GR D AKE+ +EM                             
Sbjct: 672 ILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVG 731

Query: 92  ---LQM---GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
              L+M   G+ P+  TY  ++   C+  NM EA E+  EM R G+APD V+++ L   +
Sbjct: 732 SILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGY 791

Query: 146 SRNGQLDRAL 155
            +  +L   L
Sbjct: 792 CKERELTVTL 801



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 1/158 (0%)

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           AF ++     +G+ P L +CN ++    ++ +  K+ E    +  +GV PD  ++ T IN
Sbjct: 205 AFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAIN 263

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
            F +   +  A  L  KME  G+ P+V+TYN ++ G  + GR  ++     RM+   +NP
Sbjct: 264 AFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNP 323

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              TY  LI+G +     +EA     EM   GF P++ 
Sbjct: 324 SVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEV 361


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  280 bits (717), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 259/484 (53%), Gaps = 10/484 (2%)

Query: 1   MVNALCK---DHKIDSAKMFLCEMEQKG---VYPDTVTYNTLINAYCREGFLEEAFQLMN 54
           ++ ALC+   DH +  A+  L +M ++      P+ V+Y T++   C      EA  L+ 
Sbjct: 89  VLAALCRRGGDH-LRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLR 147

Query: 55  SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
           SM   G++  V TY +LI GLC     D A E+LDEM   G+ P+   Y+ LL   CR  
Sbjct: 148 SMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSG 207

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              +  ++F +MSRRG+ PD++ F+ LI    + G+  +A      M   GL P+ V Y 
Sbjct: 208 RWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYN 267

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++IN  C+ G V EAL +R EM +KG   DVVTYNT++ GL     + EA     EM++ 
Sbjct: 268 VLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQG 327

Query: 235 G--VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
              V PD  TF ++IHG CK G M +A+ + ++M ++    ++VTYN LI GF +V +++
Sbjct: 328 DTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVK 387

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
            A  L  ++    + P+  +Y ILING+  M  V  A +    M  +GIK  L     ++
Sbjct: 388 MAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLL 447

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
              C+ G   +A    ++M  +    D+I+Y+T+I+G  +  +M     L+  M ++GL 
Sbjct: 448 AAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLA 506

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           PD +TY++++  + + G + ++E +L +M   G  PD + + +LI G+ ++    +  + 
Sbjct: 507 PDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKL 566

Query: 473 HDEM 476
             EM
Sbjct: 567 IHEM 570



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 152/466 (32%), Positives = 252/466 (54%), Gaps = 10/466 (2%)

Query: 29  DTVTYNTLINAYCREG--FLEEAFQLMNSMSGKG---LKPGVFTYNSLINGLCKKGRCDR 83
           D V+YNT++ A CR G   L +A  L+  MS +     +P   +Y +++ GLC   R   
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A  +L  M   G+  D  TY TL+   C    +  A E+  EM   GV P++V +S L+ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            + R+G+       F +M   G+ PD +++T +I+  C+ G   +A K++D M+++G   
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +VVTYN ++N LC+   + EA  L  EM ++GV PD  T+ TLI G      M++A++  
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 264 DIMTQKS--IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           + M Q    ++PD+VT+N++I G CK+G M +A K+   M  R    N ++Y  LI G+ 
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
            +  V  A  L  E+   G++P   + + +I G+ +  +  +A++FL  M   G+  +  
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELF 441

Query: 382 SYNTLINGFVREENMDKAFALVSKME-NQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            Y  L+    ++  M++A  L ++M+ N GL  D I Y+ ++ G C+ G M   + ++  
Sbjct: 442 HYIPLLAAMCQQGMMERAMGLFNEMDKNCGL--DAIAYSTMIHGACKSGDMKTVKQLIQD 499

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           M+++GL PD  TY+ LIN +    +L+EA R   +M   GFVPD A
Sbjct: 500 MLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVA 545



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 138/421 (32%), Positives = 238/421 (56%), Gaps = 5/421 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++D+A   L EM   GV P+ V Y+ L+  YCR G  ++  ++   MS +G
Sbjct: 164 LIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRG 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V  +  LI+ LCK+G+  +A +V D M+Q GL P+  TYN L+   C++ ++ EA 
Sbjct: 224 IKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREAL 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV--PDNVLYTIIIN 178
            +  EM  +GVAPD+V+++TLI   S   ++D A+ +  EM     V  PD V +  +I+
Sbjct: 284 TLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIH 343

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C+ G + +A+K+R+ M E+GC+ ++VTYN ++ G  R   +  A +L +E+   G+ P
Sbjct: 344 GLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEP 403

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D +T++ LI+G  K   +++A      M Q+ IK ++  Y  L+   C+ G ME+A  L+
Sbjct: 404 DSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLF 463

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  +    + I+Y  +I+G C  G +    +L  +M+ +G+ P  V+ + +I  Y + 
Sbjct: 464 NEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKL 522

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM--ENQGLVPDVI 416
           GD  +A+  L +M + G  PD   +++LI G+  E   DK   L+ +M  +N    P +I
Sbjct: 523 GDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKII 582

Query: 417 T 417
           +
Sbjct: 583 S 583



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 196/357 (54%), Gaps = 7/357 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ K   A      M Q+G+ P+ VTYN LIN+ C+EG + EA  L   M  KG
Sbjct: 234 LIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKG 293

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ--MGLSPDTATYNTLLVESCRKENMSE 118
           + P V TYN+LI GL      D A   L+EM+Q    + PD  T+N+++   C+   M++
Sbjct: 294 VAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQ 353

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A ++   M+ RG   ++V+++ LIG F R  ++  A+    E+  +GL PD+  Y+I+IN
Sbjct: 354 AVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILIN 413

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+ +   V  A K    M ++G   ++  Y  +L  +C+  M+  A  LFNEM ++    
Sbjct: 414 GFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGL 472

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   ++T+IHG CK G+M     L   M  + + PD VTY+ LI+ + K+G++E+A ++ 
Sbjct: 473 DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVL 532

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK--PTLVSCNTIIK 353
             M +    P+   +  LI GY + G   +  +L +EM  K +   P ++S  TII+
Sbjct: 533 KQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIIS--TIIR 587



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 159/312 (50%), Gaps = 10/312 (3%)

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR--AKMLTEADDLFNEMLE 233
           ++N   R   V EA  +   + +   V D V+YNT+L  LCR     L +A  L  +M  
Sbjct: 57  LLNRRLRGAPVTEACSLLSALPD---VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSR 113

Query: 234 R---GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
                  P+  ++TT++ G C      +A+ L   M    ++ D+VTY TLI G C   E
Sbjct: 114 EAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASE 173

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           ++ A +L  +M    + PN + Y  L+ GYC  G   +  +++ +M  +GIKP ++    
Sbjct: 174 LDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTG 233

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I   C+ G   KA +    MV  G++P+ ++YN LIN   +E ++ +A  L  +M+++G
Sbjct: 234 LIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKG 293

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG--LNPDRSTYTTLINGHVSQNNLKE 468
           + PDV+TYN ++ G      M ++   L  MI+    + PD  T+ ++I+G      + +
Sbjct: 294 VAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQ 353

Query: 469 AFRFHDEMLQRG 480
           A +  + M +RG
Sbjct: 354 AVKVREMMAERG 365


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  280 bits (717), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 147/418 (35%), Positives = 247/418 (59%), Gaps = 6/418 (1%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           AF L   M    L     T+N ++  LC  G+  RA E+L +M +    P+  TYNT++ 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193

Query: 109 ESCRKENMSEAEEIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
             C +  +  A +I  EM  RG +AP+  ++ T+I  + + G++D A+  F EM + G V
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 168 -PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            P+ V+Y  +I GYC  G +  AL  RD M+E+G  M V TYN +++ L      TEA +
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L  EM  +G+  D +T+  LI+GHCK+GN+ KAL +F+ M+++ ++  +VTY +LI    
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G++++ +KL+ + + R I P+ + Y  LIN + + G++  AF +  EM  K I P  V
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + NT+++G C  G   +A + + +M   G+ PD ++YNTLI+G+  + ++  A  + ++M
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 493

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            N+G  P ++TYN ++ G C+ G+  D+E ++  M+E G+ PD STY +LI G  +++
Sbjct: 494 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 551



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/396 (35%), Positives = 218/396 (55%), Gaps = 6/396 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           M+  LC   K   A   L +M +    P+ VTYNT+I  +C  G ++ A  +M  M  + 
Sbjct: 160 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 215

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSE 118
           G+ P  +TY ++I+G CK GR D A +V DEML  G + P+   YN L+   C +  +  
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A      M  RGVA  + +++ L+     +G+   A     EM   GL  D   Y I+IN
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+ G V +AL++ + M  +G    VVTY +++  L +   + E D LF+E + RG+ P
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +  LI+ H   GN+++A  +   M +K I PD VTYNTL+ G C +G +++A KL 
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R I P+ ++Y  LI+GY   G V +A R+  EM+ KG  PTL++ N +I+G C++
Sbjct: 456 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 515

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           G    A+  + +MV  G+ PD  +Y +LI G   E+
Sbjct: 516 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 551



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/399 (33%), Positives = 214/399 (53%), Gaps = 6/399 (1%)

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +M ++ L   T T+N +L   C     + A E+  +M R    P+ V+++T+I  F   G
Sbjct: 144 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG 199

Query: 150 QLDRALMYFREMKS-AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVT 207
           ++  AL   REM+   G+ P+   Y  +I+G+C+ G V EA+K+ DEML KG V  + V 
Sbjct: 200 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 259

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ G C    L  A    + M+ERGV     T+  L+H    DG   +A  L + M 
Sbjct: 260 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 319

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K +  D+ TYN LI+G CK G ++KA +++ +M  R +    ++Y  LI      G V 
Sbjct: 320 GKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 379

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           E  +L+ E V +GI+P LV  N +I  +  SG+  +A E + +M  + + PD ++YNTL+
Sbjct: 380 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 439

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G      +D+A  L+ +M  +G+ PD++TYN +++G+  +G + D+  I   M+ KG N
Sbjct: 440 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 499

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P   TY  LI G        +A     EM++ G  PDD+
Sbjct: 500 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 538


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 263/485 (54%), Gaps = 5/485 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L    K+D A  F   M   G  PD + + TLI+ +C+ G  +   +L+N  + K 
Sbjct: 13  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQ-ALKR 71

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P VF Y S+I+G CK G  D         +    S D  +Y T++      + + EA 
Sbjct: 72  FRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKGLADSKRIDEAC 128

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F E+   G +P++V+++ +I    + G+++  L  F EM  +  VP    YT++I+G 
Sbjct: 129 ELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGL 188

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A K+ ++M++KGCV D +TY T+++G  +A  + EA  L + ML +G  P  
Sbjct: 189 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 248

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++HG CK   +N+A  +   M ++  +P +  + +L+  +   G  E+A ++  +
Sbjct: 249 VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 308

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +R  +P+ I Y  LI+   S G V EA  ++  M+ KG  P  ++  TII+ + + G+
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 368

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E L  M   GV PD  +YN+L++G+V+ E +D+AF +  +M   G+ P+ +T+NV
Sbjct: 369 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 428

Query: 421 ILTGFCRQGRMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++ G  + G+   +  +   M+EK  + P   +YT LI+G      + EAF    EM+ R
Sbjct: 429 LMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDR 488

Query: 480 GFVPD 484
           G +P+
Sbjct: 489 GIIPE 493



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 233/438 (53%), Gaps = 1/438 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  +I+       EM      P   TY  +I+  C+   L +A ++   M  KG
Sbjct: 149 VIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 208

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY +LI+G  K  + D A+++LD ML  G  P   TY +++   C+ + ++EA+
Sbjct: 209 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 268

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M  RG  P +  F++L+  +   G+ + A     EM + G  PD +LYT +I+  
Sbjct: 269 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 328

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V EA  + D M+EKGC  D +TY TI+    +   +  A ++   M + GV PD 
Sbjct: 329 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 388

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + +L+ G+ K   +++A  ++D M    IKP+ VT+N L+ G  K G+ ++A  L+ +
Sbjct: 389 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 448

Query: 301 MISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           M+ ++ + P  +SY ILI+G    G V+EAF  + EM+ +GI P   +  ++I    ++G
Sbjct: 449 MLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAG 508

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A + +  MV  GV+PD  +Y+ LI G +    +D A+ +  +M  +G  P+ +TY 
Sbjct: 509 RIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYK 568

Query: 420 VILTGFCRQGRMHDSELI 437
           V+  GF   GR  D E +
Sbjct: 569 VLRRGFRAAGRALDLEAV 586



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 235/460 (51%), Gaps = 1/460 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    +ID A     E++  G  P+ V Y  +I+   + G +E+  +    MSG  
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY  +I+GLCK      A +V ++M+Q G  PDT TY TL+    +   M EA 
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M  +G  P  V++ +++  F +   ++ A     +M+  G  P   ++T +++ Y
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G   EA ++  EM  +GC  DV+ Y ++++ L     + EA  +F+ M+E+G  PD 
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I    K GN+  A  + ++M +  + PD   YN+L+DG+ K+  +++A  ++  
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 413

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG-IKPTLVSCNTIIKGYCRSG 359
           M++  I PN +++ +L++G    G    AF L+ EM+ K  + PTLVS   +I G  ++G
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S+A     +M+  G+ P+  +Y +LI    +   + +A  LV  M   G+ PDV  Y+
Sbjct: 474 RVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 533

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            ++TG      +  +  +   M+++G  P+  TY  L  G
Sbjct: 534 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 573



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 161/317 (50%), Gaps = 33/317 (10%)

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           GC   +V+YNT+++GL     + EA   FN M++ G  PD   FTTLIHG CK G     
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM---------------------------- 291
             L +    K  +PD+  Y ++I G+CK G++                            
Sbjct: 62  HKLLN-QALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 292 ----EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
               ++A +L+ ++ +   SPN ++Y  +I+G    G + +  + + EM G    PT  +
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              +I G C++     A +   +MV +G  PD+I+Y TLI+GF +   MD+A  L+  M 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G  P  +TY  I+ GFC+   +++++ ++ +M E+G  P    +T+L++ ++S+   +
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 468 EAFRFHDEMLQRGFVPD 484
           EA++   EM  RG  PD
Sbjct: 301 EAYQVLTEMTARGCAPD 317


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 271/487 (55%), Gaps = 2/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK++ + SA     +ME +G  P++VT++ LI  + + G +E+A +    M   G
Sbjct: 344 LITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLG 403

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P VF  +++I G  K  + + A ++ DE  + GL+ +    NT+L   C++  + +A 
Sbjct: 404 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKAT 462

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M  RG+ P++VS++ ++    R   +D A   F  M   GL P+N  Y+I+I+G 
Sbjct: 463 ELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGC 522

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-PD 239
            +N      L++ ++M      ++ V Y TI+NGLC+    ++A +L   M+E   F   
Sbjct: 523 FKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVS 582

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++ ++I G  K+G M+ A+  ++ M    I P+++TY +L+DG CK   M++A ++  
Sbjct: 583 CMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRD 642

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M ++ +  +  +YG LI+G+C   ++  A  L+ E++ +G+ P+    N++I G+   G
Sbjct: 643 EMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLG 702

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +   A +   KM+ +G+  D  +Y TLI+G ++E N+  A  L ++M+  GLVPD I Y 
Sbjct: 703 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYT 762

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           VI+ G  ++G+      +   M +  + P+   Y  +I GH  + NL EAFR HDEML +
Sbjct: 763 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 822

Query: 480 GFVPDDA 486
           G +PD A
Sbjct: 823 GILPDGA 829



 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 259/485 (53%), Gaps = 7/485 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  ++ K   A        ++G  PD++ Y+  + A C+   L  A  L+  M  K 
Sbjct: 238 LMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKK 297

Query: 61  L-KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           L  P   TY S+I    K+G  + A    DEM+  G+S +     +L+   C+  ++  A
Sbjct: 298 LCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSA 357

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++F +M   G +P+ V+FS LI  FS+NG++++AL ++++M+S GL P       II G
Sbjct: 358 LDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQG 417

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + +     EALK+ DE  E G + +V   NTIL+ LC+   + +A +L  +M  RG+ P+
Sbjct: 418 WLKGQKHEEALKLFDESFETG-LANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPN 476

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++  ++  HC+  NM+ A  +F  M +K +KP+  TY+ LIDG  K  + +   ++  
Sbjct: 477 VVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVN 536

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC---NTIIKGYC 356
            M S  I  N + Y  +ING C +G  ++A  L   M+ +  K   VSC   N+II G+ 
Sbjct: 537 QMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE--KRFCVSCMSYNSIIDGFI 594

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G+   A     +M + G+ P+ I+Y +L++G  +   MD+A  +  +M+N+G+  D+ 
Sbjct: 595 KEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIP 654

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            Y  ++ GFC++  M  +  +   ++E+GLNP +  Y +LI+G  +  N+  A   + +M
Sbjct: 655 AYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKM 714

Query: 477 LQRGF 481
           L+ G 
Sbjct: 715 LKDGL 719



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 222/392 (56%), Gaps = 1/392 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  KID A   L +ME +G+ P+ V+YN ++ A+CR+  ++ A  + ++M  KG
Sbjct: 448 ILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKG 507

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TY+ LI+G  K        EV+++M    +  +   Y T++   C+    S+A 
Sbjct: 508 LKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 567

Query: 121 EIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E+   M   +      +S++++I  F + G++D A+  + EM + G+ P+ + YT +++G
Sbjct: 568 ELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDG 627

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+N  + +AL+MRDEM  KG  +D+  Y  +++G C+   +  A  LF+E+LE G+ P 
Sbjct: 628 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPS 687

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              + +LI G    GNM  AL+L+  M +  ++ D+ TY TLIDG  K G +  A+ L+ 
Sbjct: 688 QPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYT 747

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M +  + P+ I Y +++NG    G   +  +++ EM    + P ++  N +I G+ R G
Sbjct: 748 EMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 807

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +  +A     +M+ +G+ PD  +++ L++G V
Sbjct: 808 NLDEAFRLHDEMLDKGILPDGATFDILVSGKV 839



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 158/544 (29%), Positives = 249/544 (45%), Gaps = 78/544 (14%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +DSAK+F  E+  +        +N L+NAY ++   + A  ++N M   G+ P V   N 
Sbjct: 150 VDSAKLFGFEVNSRA-------FNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNR 202

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
            ++ L ++     AKE+   M+ +G+  D  T   L+  S R+E  +EA E+F     RG
Sbjct: 203 TLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERG 262

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL-VPDNVLYTIIINGYCRNGFVLEA 189
             PD + +S  +    +   L  A    REMK   L VP    YT +I    + G + +A
Sbjct: 263 AEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDA 322

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           ++ +DEM+  G  M+VV   +++ G C+   L  A DLF +M   G  P+  TF+ LI  
Sbjct: 323 IRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIER 382

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF------------------------ 285
             K+G M KAL  +  M    + P +   +T+I G+                        
Sbjct: 383 FSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV 442

Query: 286 ----------CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
                     CK G+++KA +L   M SR I PN +SY  ++  +C   ++  A  ++  
Sbjct: 443 FICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSN 502

Query: 336 MVGKGIKPT--------------------------LVSCN---------TIIKGYCRSGD 360
           M+ KG+KP                           + S N         TII G C+ G 
Sbjct: 503 MLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQ 562

Query: 361 ASKADEFLSKMVSEGVDPDS-ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            SKA E L+ M+ E     S +SYN++I+GF++E  MD A A   +M   G+ P+VITY 
Sbjct: 563 TSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYT 622

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+  RM  +  +   M  KG+  D   Y  LI+G   ++N++ A     E+L+ 
Sbjct: 623 SLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEE 682

Query: 480 GFVP 483
           G  P
Sbjct: 683 GLNP 686



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 1   MVNALCKDHK-IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +VN L K  + +   KMF  EM++  V P+ + YN +I  + REG L+EAF+L + M  K
Sbjct: 764 IVNGLSKKGQFVKVVKMFE-EMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 822

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRA 84
           G+ P   T++ L++G   K +  RA
Sbjct: 823 GILPDGATFDILVSGKVGKFQPIRA 847


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 269/520 (51%), Gaps = 35/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++D A      MEQ+G+ PD + Y+TLI+ Y + G L    +L +    KG
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V  ++S I+   K G    A  V   ML  G+SP+  TY  L+   C+   + EA 
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ ++ +RG+ P IV++S+LI  F + G L      + +M   G  PD V+Y ++++G 
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +L A++   +ML +   ++VV +N++++G CR     EA  +F  M   G+ PD 
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK-----VG------ 289
            TFTT++     +G + +AL LF  M +  ++PD + Y TLID FCK     +G      
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591

Query: 290 ------------------------EMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                                    +E A+K + ++I  K+ P+ ++Y  +I GYCS+  
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA R++  +      P  V+   +I   C++ D   A    S M  +G  P++++Y  
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++ F +  +++ +F L  +M+ +G+ P +++Y++I+ G C++GR+ ++  I  + I+  
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           L PD   Y  LI G+     L EA   ++ ML+ G  PDD
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 215/422 (50%), Gaps = 37/422 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+D +I  A     ++ ++G+ P  VTY++LI+ +C+ G L   F L   M   G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  Y  L++GL K+G    A     +ML   +  +   +N+L+   CR     EA 
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   G+ PD+ +F+T++ +    G+L+ AL  F  M   GL PD + Y  +I+ +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576

Query: 181 CRN-----GFVL------------------------------EALKMRDEMLEKGCVMDV 205
           C++     G  L                              +A K  + ++E     D+
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVF-PDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VTYNT++ G C  + L EA+ +F E+L+   F P+  T T LIH  CK+ +M+ A+ +F 
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           IM +K  KP+ VTY  L+D F K  ++E + KL+ +M  + ISP+ +SY I+I+G C  G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EA  ++++ +   + P +V+   +I+GYC+ G   +A      M+  GV PD +   
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQR 815

Query: 385 TL 386
            L
Sbjct: 816 AL 817



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 227/439 (51%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +E A +L++ +   G  P V T+ +LING CK+G  DRA ++   M Q G+ PD   Y+T
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+    +   +    ++F +   +GV  D+V FS+ I ++ ++G L  A + ++ M   G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           + P+ V YTI+I G C++G + EA  M  ++L++G    +VTY+++++G C+   L    
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            L+ +M++ G  PD   +  L+ G  K G M  A+     M  +SI+ ++V +N+LIDG+
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C++   ++A K++  M    I P+  ++  ++      G + EA  L++ M   G++P  
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++  T+I  +C+    +   +    M    +  D    N +I+   +   ++ A    + 
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +    + PD++TYN ++ G+C   R+ ++E I   +      P+  T T LI+     N+
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +  A R    M ++G  P+
Sbjct: 687 MDGAIRMFSIMAEKGSKPN 705



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 226/466 (48%), Gaps = 49/466 (10%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQ--------MG----LSPDTATYNTLLVESCRKE 114
           ++ ++ + L + G  D A +V DEM+         +G     S D      L+   CR  
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV-LY 173
            + +A EIF   ++ GV     S   ++     + ++D    +F ++   G+ P  V  +
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +++     G V +AL     ++E+G  + +V+ N +L GL     +  A  L + +L+
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLD 279

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G  P+  TF TLI+G CK G M++A +LF +M Q+ I+PD++ Y+TLIDG+ K G +  
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339

Query: 294 ANKLWAD-----------------------------------MISRKISPNYISYGILIN 318
            +KL++                                    M+ + ISPN ++Y ILI 
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G C  G + EAF ++ +++ +G++P++V+ +++I G+C+ G+          M+  G  P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D + Y  L++G  ++  M  A     KM  Q +  +V+ +N ++ G+CR  R  ++  + 
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             M   G+ PD +T+TT++   + +  L+EA      M + G  PD
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 258/491 (52%), Gaps = 34/491 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN  CK   ++ A  ++  + + G+ PD  TY +LI  YC+   L+ AF++   M  KG
Sbjct: 224 MVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKG 283

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +     Y  LI+GLC + R D A ++  +M      P   TY  L+   C  E  SEA 
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEAL 343

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G+ P+I +++ LI       +L++A     +M   GL+P+ + Y  +INGY
Sbjct: 344 NLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGY 403

Query: 181 CRNGFVLEALKMRD----------------------------------EMLEKGCVMDVV 206
           C+ G + +AL + +                                  +MLE+  + DVV
Sbjct: 404 CKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVV 463

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TYN++++G CR+     A  L + M +RG+ PD +T+T++I   CK   + +A +LFD +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            QK + P++V Y  LIDG+CK G++ +A+ +   M+S+   PN +++  LI+G C+ G +
Sbjct: 524 EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKL 583

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA  L  +MV   ++PT+ +   +I    + GD   A     +M+S G  PD+ +Y T 
Sbjct: 584 KEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTF 643

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I  + RE  +  A  +V+KM+  G+ PD+ TY+ ++ G+   GR + + ++L RM + G 
Sbjct: 644 IQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGC 703

Query: 447 NPDRSTYTTLI 457
            P + T+ +LI
Sbjct: 704 EPSQHTFLSLI 714



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 161/513 (31%), Positives = 256/513 (49%), Gaps = 40/513 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+L +   +D  K    EM +  V P+  TYN ++N YC+ G +EEA Q ++ +   G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAG 248

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEM--------------LQMGLS--------- 97
           L P  FTY SLI G C++   D A +V  EM              L  GL          
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAM 308

Query: 98  ------------PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                       P   TY  L+   C  E  SEA  +  EM  +G+ P+I +++ LI   
Sbjct: 309 DLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSL 368

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
               +L++A     +M   GL+P+ + Y  +INGYC+ G + +AL + + M  +    + 
Sbjct: 369 CSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNT 428

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYN ++ G C+ + + +A  + N+MLER V PD  T+ +LI G C+ GN + A  L  +
Sbjct: 429 RTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  + + PD  TY ++ID  CK   +E+A  L+  +  + + PN + Y  LI+GYC  G 
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V EA  +  +M+ K   P  ++ N +I G C  G   +A     KMV   + P   +   
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTI 607

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+  +++ + D A+    +M + G  PD  TY   +  +CR+GR+ D+E ++ +M E G
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAF----RFHD 474
           ++PD  TY++LI G+        AF    R HD
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHD 700



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 253/452 (55%), Gaps = 1/452 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YNTL+N+  R G ++E  Q+   M    + P ++TYN ++NG CK G  + A + +  ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           + GL PD  TY +L++  C+++++  A ++F EM  +G   + V+++ LI       ++D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            A+  F +MK     P    YT++I   C +    EAL +  EM EKG   ++ TY  ++
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           + LC    L +A +L  +MLE+G+ P+  T+  LI+G+CK G +  AL++ ++M  ++++
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+  TYN LI G+CK   + KA  +   M+ RK+ P+ ++Y  LI+G C  G+   A+RL
Sbjct: 426 PNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
              M  +G+ P   +  ++I   C+S    +A +    +  + V P+ + Y  LI+G+ +
Sbjct: 485 LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCK 544

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              +++A  ++ KM ++  +P+ +T+N ++ G C  G++ ++ L+  +M++  L P  ST
Sbjct: 545 AGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVST 604

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            T LI+  +   +   A+R   +ML  G  PD
Sbjct: 605 DTILIHRLLKDGDFDHAYRRFQQMLSSGTKPD 636



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 153/504 (30%), Positives = 259/504 (51%), Gaps = 20/504 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC   K++ A+  L +M +KG+ P+ +TYN LIN YC+ G +E+A  ++  M  + 
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P   TYN LI G CK+    +A  VL++ML+  + PD  TYN+L+   CR  N   A 
Sbjct: 424 LRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+ RG+ PD  +++++I    ++ +++ A   F  ++   ++P+ V+YT +I+GY
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  M ++ML K C+ + +T+N +++GLC    L EA  L  +M++  + P  
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T T LIH   KDG+ + A   F  M     KPD  TY T I  +C+ G ++ A  + A 
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK------- 353
           M    +SP+  +Y  LI GY  +G    AF +   M   G +P+  +  ++IK       
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKY 722

Query: 354 --------GYCRSGDASKAD---EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
                   G C   +  + D   E L KMV  GV P++ SY  L+ G     N+  A  +
Sbjct: 723 GKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKV 782

Query: 403 VSKMEN-QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
              M+  +G+ P  + +N +L+  C+  + +++  ++  MI  G  P   +   LI    
Sbjct: 783 FDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLY 842

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDD 485
            +   +        +LQ G+  D+
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYDDE 866



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 230/448 (51%), Gaps = 26/448 (5%)

Query: 62  KPGVFTYNSLINGLCKKG--------------RCDRAKEVL-----------DEMLQMGL 96
           K  V++Y SL+  L   G               CD   + L           DE  ++  
Sbjct: 120 KHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELKY 179

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
                 YNTLL    R   + E ++++ EM    V P+I +++ ++  + + G ++ A  
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQ 239

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           Y   +  AGL PD   YT +I GYC+   +  A K+  EM  KGC  + V Y  +++GLC
Sbjct: 240 YVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLC 299

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
             + + EA DLF +M +   +P   T+T LI   C     ++ALNL   M +K IKP+I 
Sbjct: 300 VERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIH 359

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TY  LID  C   ++EKA +L   M+ + + PN I+Y  LINGYC  G + +A  +   M
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
             + ++P   + N +IKGYC+  +  KA   L+KM+   V PD ++YN+LI+G  R  N 
Sbjct: 420 ESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           D A+ L+S M ++GLVPD  TY  ++   C+  R+ ++  +   + +K + P+   YT L
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           I+G+     + EA    ++ML +  +P+
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPN 566



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 54/267 (20%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +   C++ ++  A+  + +M++ GV PD  TY++LI  Y   G    AF ++  M   G 
Sbjct: 644 IQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGC 703

Query: 62  KPGVFTYNSLIN------------------------------------------------ 73
           +P   T+ SLI                                                 
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSY 763

Query: 74  -----GLCKKGRCDRAKEVLDEMLQM-GLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
                G+C+ G    A++V D M Q  G+SP    +N LL   C+ E  +EA ++  +M 
Sbjct: 764 EKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMI 823

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G  P + S   LI    + G+ +R    F+ +   G   D + + III+G  + G V 
Sbjct: 824 CVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVE 883

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNG 214
              ++ + M + GC     TY+ ++ G
Sbjct: 884 AFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 156/483 (32%), Positives = 256/483 (53%), Gaps = 22/483 (4%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME + V  +  ++  L+  +C    L  A      ++  G  P V T+++L++GLC + 
Sbjct: 103 KMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVE- 161

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             DR  E LD   QM   P+  T+ TL+   CR+  + EA  +   M   G+ P+ +++ 
Sbjct: 162 --DRISEALDLFHQM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYG 218

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY------TIIINGYCRNGFVLEALKMR 193
           T++    + G    AL   R+M+    +  NV+       T +ING+C +G   EA ++ 
Sbjct: 219 TIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLL 278

Query: 194 DEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
            EMLE+  +  DVVTYN ++N   +     EA++L++EML RG+ P   T++++I G CK
Sbjct: 279 QEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCK 338

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
              ++ A ++F +M  K   PDI+T+NTLI G+C+   ++   KL  +M    +  N I+
Sbjct: 339 QNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 398

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y  LI+G+C +G +  A  L  EMV  G+ P +V+CNT++ G C +G    A E    M 
Sbjct: 399 YTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 458

Query: 373 SE-----------GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
                        GV+PD  +YN LI+G + E    +A  L  +M ++G+VPD ITYN +
Sbjct: 459 KSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSV 518

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + G C+Q R+ ++  +   M  K  +P+  T+TTLING+     + +      EM +RG 
Sbjct: 519 IHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 578

Query: 482 VPD 484
           V +
Sbjct: 579 VAN 581



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 262/502 (52%), Gaps = 22/502 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G +P  VT++TL++  C E  + EA  L + M    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC--- 175

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V T+ +L+NGLC++GR   A  +LD ML+ GL P+  TY T++   C+  +   A 
Sbjct: 176 -KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 121 EIFCEMSR-RGVAPDIVSF-----STLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLY 173
            +  +M     + P++V +     + +I  F  +G+   A    +EM +   + PD V Y
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +IN + + G   EA ++ DEML +G +   +TY+++++G C+   L  A+ +F  M  
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT 354

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           +G  PD  TF TLI G+C+   ++  + L   MT+  +  + +TY TLI GFC+VG++  
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 414

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-----------GIK 342
           A  L  +M+S  + PN ++   L++G C  G + +A  ++  M              G++
Sbjct: 415 AQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVE 474

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P + + N +I G    G   +A+E   +M   G+ PD+I+YN++I+G  ++  +D+A  +
Sbjct: 475 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQM 534

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
              M ++   P+V+T+  ++ G+C+ GR+ D   +   M  +G+  +  TY TLI+G   
Sbjct: 535 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRK 594

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
             N+  A     EM+  G  PD
Sbjct: 595 VGNINGALDIFQEMMASGVYPD 616



 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 267/494 (54%), Gaps = 22/494 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC + +I  A     +M +    P+ VT+ TL+N  CREG + EA  L++ M   G
Sbjct: 154 LLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDG 209

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATY----NTLLVES-CRKE 114
           L+P   TY ++++G+CK G    A  +L +M ++  + P+   +     T ++   C   
Sbjct: 210 LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSG 269

Query: 115 NMSEAEEIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
             SEA+++  EM  R+ ++PD+V+++ LI  F + G+   A   + EM   G++P  + Y
Sbjct: 270 RWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITY 329

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           + +I+G+C+   +  A  M   M  KGC  D++T+NT++ G CRAK + +   L +EM E
Sbjct: 330 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 389

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+  +  T+TTLIHG C+ G++N A +L   M    + P++VT NTL+DG C  G+++ 
Sbjct: 390 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKD 449

Query: 294 ANKLWADMISRK-----------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           A +++  M   K           + P+  +Y ILI+G  + G   EA  L+ EM  +GI 
Sbjct: 450 ALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 509

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P  ++ N++I G C+     +A +    M S+   P+ +++ TLING+ +   +D    L
Sbjct: 510 PDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 569

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M  +G+V + ITY  ++ GF + G ++ +  I   M+  G+ PD  T   ++ G  S
Sbjct: 570 FCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWS 629

Query: 463 QNNLKEAFRFHDEM 476
           +  LK A    +++
Sbjct: 630 KEELKRAVAMLEDL 643



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/425 (33%), Positives = 237/425 (55%), Gaps = 18/425 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQ-KGVYPDTVTY-----NTLINAYCREGFLEEAFQLMN 54
           +V+ +CK     SA   L +ME+   + P+ V +       +IN +C  G   EA QL+ 
Sbjct: 220 IVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQ 279

Query: 55  SM-SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK 113
            M   K + P V TYN+LIN   K+G+   A+E+ DEML  G+ P T TY++++   C++
Sbjct: 280 EMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQ 339

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
             +  AE +F  M+ +G +PDI++F+TLI  + R  ++D  +    EM  AGLV + + Y
Sbjct: 340 NRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITY 399

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           T +I+G+C+ G +  A  +  EM+  G   +VVT NT+L+GLC    L +A ++F  M +
Sbjct: 400 TTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 459

Query: 234 R-----------GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
                       GV PD  T+  LI G   +G   +A  L++ M  + I PD +TYN++I
Sbjct: 460 SKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVI 519

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            G CK   +++A +++  M S+  SPN +++  LINGYC  G V +   L+ EM  +GI 
Sbjct: 520 HGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 579

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
              ++  T+I G+ + G+ + A +   +M++ GV PD+I+   ++ G   +E + +A A+
Sbjct: 580 ANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAM 639

Query: 403 VSKME 407
           +  ++
Sbjct: 640 LEDLQ 644



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 248/468 (52%), Gaps = 31/468 (6%)

Query: 42  REGF-----LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL 96
           R GF     LE+A  L   M      P V  +  L+  + + GR D     L   ++M  
Sbjct: 50  RSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVIS-LHRKMEMRR 108

Query: 97  SPDTATYNTLLVES-CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
            P  A   T+L++  C    +  A   F ++++ G  P +V+FSTL+       ++  AL
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
             F +M      P+ V +T ++NG CR G V+EA+ + D MLE G   + +TY TI++G+
Sbjct: 169 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 216 CRAKMLTEADDLFNEMLE-RGVFPDFYTF-----TTLIHGHCKDGNMNKALNLF-DIMTQ 268
           C+      A +L  +M E   + P+   +     T +I+G C  G  ++A  L  +++ +
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLER 284

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K I PD+VTYN LI+ F K G+  +A +L+ +M+ R I P+ I+Y  +I+G+C    +  
Sbjct: 285 KKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDA 344

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  ++Y M  KG  P +++ NT+I GYCR+       + L +M   G+  ++I+Y TLI+
Sbjct: 345 AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 404

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK---- 444
           GF +  +++ A  L+ +M + G+ P+V+T N +L G C  G++ D+ L +++ ++K    
Sbjct: 405 GFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDA-LEMFKAMQKSKMD 463

Query: 445 --------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                   G+ PD  TY  LI+G +++    EA   ++EM  RG VPD
Sbjct: 464 IDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 10/237 (4%)

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +  A++LF  M +    P ++ +  L+    ++G ++    L   M  R++  N  S+ I
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           L+  +CS   +  A   + ++   G  PT+V+ +T++ G C     S+A +   +M    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK-- 176

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             P+ +++ TL+NG  RE  + +A AL+ +M   GL P+ ITY  I+ G C+ G    + 
Sbjct: 177 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 436 LILWRMIE-KGLNPDRSTY-----TTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            +L +M E   + P+   +     T +ING  S     EA +   EML+R  +  D 
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDV 291



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 4/196 (2%)

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           L  GF ++  +E A  L+ DM+  +  P+ I +  L+     MG +     L  +M  + 
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           +     S   ++K +C       A     K+   G  P  ++++TL++G   E+ + +A 
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L  +M      P+V+T+  ++ G CR+GR+ ++  +L RM+E GL P++ TY T+++G 
Sbjct: 169 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 461 VSQNNLKEAFRFHDEM 476
               +   A     +M
Sbjct: 225 CKMGDTVSALNLLRKM 240


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 141/395 (35%), Positives = 229/395 (57%)

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           ++L+ G  PDT T  T +   C K  + +A     ++   G   D VS+ TLI    + G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           +   AL   R      + PD V+Y  II+G C++  V +A  +  E + K    DV TYN
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +++G C    L +A DLFN+M  + + PD YTF+ L+ G CKDGN+ +A N+  +M ++
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
           SIKPD+VTY++L+DG+C V E+ KA  ++  M  R ++ N  SY I+ING+C +  V EA
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            +L+ EM  K I P +++ +++I G C+SG  S A E + +M   G  PD I+YN++++ 
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             ++ ++DKA  L++K++ QG+ PD+ TY +++ G C+ G++ D+  +   ++ KG N D
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              YT +I G   +    EA     +M + G +PD
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPD 647



 Score =  264 bits (674), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 238/424 (56%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           + G  PDT+T  T I  +C +G + +A    + +   G      +Y +LINGLCK G   
Sbjct: 256 KNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETK 315

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A E+L       + PD   YNT++   C+ +++++A +++ E   + + PD+ +++ LI
Sbjct: 316 AALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALI 375

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F   G+L  A+  F +M S  ++PD   ++I+++G+C++G + EA  +   M+++   
Sbjct: 376 SGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIK 435

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DVVTY+++++G C    + +A+ +FN M  RGV  +  ++  +I+G CK   +++A+ L
Sbjct: 436 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKL 495

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  M  K I PD++TY++LIDG CK G +  A +L  +M  R   P+ I+Y  +++  C 
Sbjct: 496 FKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCK 555

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
             HV +A  L  ++ G+GI+P + +   ++KG C+SG    A +    ++ +G + D  +
Sbjct: 556 KHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYA 615

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y  +I GF  +   D+A AL+SKME  G +PD  TY +I+     +     +E +L  MI
Sbjct: 616 YTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMI 675

Query: 443 EKGL 446
            +GL
Sbjct: 676 MRGL 679



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 236/438 (53%), Gaps = 3/438 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +   C   +I  A  F  ++   G + D V+Y TLIN  C+ G  + A +L+    GK +
Sbjct: 270 IKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLV 329

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P V  YN++I+G+CK    + A ++  E +   + PD  TYN L+   C    + +A +
Sbjct: 330 QPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAID 389

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F +M+ + + PD+ +FS L+  F ++G +  A      M    + PD V Y+ +++GYC
Sbjct: 390 LFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYC 449

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
               V +A  + + M  +G   +V +YN ++NG C+ KM+ EA  LF EM  + +FPD  
Sbjct: 450 LVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVI 509

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+++LI G CK G ++ AL L D M  +  +PDI+TYN+++D  CK   ++KA  L   +
Sbjct: 510 TYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKL 569

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             + I P+  +Y IL+ G C  G + +A +++ +++ KG    + +   +I+G+C  G  
Sbjct: 570 KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A   LSKM   G  PD+ +Y  +I     ++  D A  L+ +M  +GL+   +T +++
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLV-ALTDDLV 688

Query: 422 LTGFCRQGRMHDSELILW 439
            +   R  R   + L LW
Sbjct: 689 ASILVR--RTWCARLALW 704



 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 251/479 (52%), Gaps = 8/479 (1%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLI---NAYCREGFLEEAFQLM-----NSMSGKGLKP 63
           D  ++FL +  Q  ++    ++  LI     + ++  L ++F++        +   G +P
Sbjct: 202 DFKRLFLKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEP 261

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
              T  + I G C KG+  +A    D+++ MG   D  +Y TL+   C+      A E+ 
Sbjct: 262 DTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELL 321

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
                + V PD+V ++T+I    ++  ++ A   + E  S  + PD   Y  +I+G+C  
Sbjct: 322 RRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIV 381

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +A+ + ++M  K  + DV T++ +++G C+   + EA ++   M+++ + PD  T+
Sbjct: 382 GKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTY 441

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           ++L+ G+C    +NKA ++F+ M+ + +  ++ +YN +I+GFCK+  +++A KL+ +M  
Sbjct: 442 SSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHH 501

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           ++I P+ I+Y  LI+G C  G ++ A  L  EM  +G +P +++ N+I+   C+     K
Sbjct: 502 KQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDK 561

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A   L+K+  +G+ PD  +Y  L+ G  +   ++ A  +   +  +G   DV  Y V++ 
Sbjct: 562 AITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQ 621

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           GFC +G   ++  +L +M E G  PD  TY  +I     ++    A +   EM+ RG +
Sbjct: 622 GFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 210/376 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +  +A   L   + K V PD V YNT+I+  C++  + +AF L +    K 
Sbjct: 304 LINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKR 363

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTYN+LI+G C  G+   A ++ ++M    + PD  T++ L+   C+  N+ EA+
Sbjct: 364 IFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAK 423

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M ++ + PD+V++S+L+  +    ++++A   F  M   G+  +   Y I+ING+
Sbjct: 424 NVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGF 483

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA+K+  EM  K    DV+TY+++++GLC++  ++ A +L +EM  RG  PD 
Sbjct: 484 CKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDI 543

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++   CK  +++KA+ L   +  + I+PD+ TY  L+ G C+ G++E A K++ D
Sbjct: 544 ITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED 603

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ +  + +  +Y ++I G+C  G   EA  L  +M   G  P   +   II       +
Sbjct: 604 LLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDE 663

Query: 361 ASKADEFLSKMVSEGV 376
              A++ L +M+  G+
Sbjct: 664 NDMAEKLLREMIMRGL 679



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 195/419 (46%), Gaps = 48/419 (11%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
            N ++A  +F  + R+   P  + F  ++G   ++      L   ++M+  G+  + +  
Sbjct: 89  HNNNDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNC 148

Query: 174 TIIINGYCRNGFVLEALK-----------MRD-------EMLEKGCVMDVVTYN------ 209
            I+IN +C+ G +  A             ++D       E  ++ C + ++ ++      
Sbjct: 149 NILINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFL 208

Query: 210 ------TILNGLCRAKMLTEADDLF------------------NEMLERGVFPDFYTFTT 245
                  + N L   K+L E    F                   ++L+ G  PD  T TT
Sbjct: 209 KDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTT 268

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
            I G C  G +++AL+  D +       D V+Y TLI+G CKVGE + A +L      + 
Sbjct: 269 FIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKL 328

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           + P+ + Y  +I+G C   HV +AF L+ E V K I P + + N +I G+C  G    A 
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +  +KM S+ + PD  +++ L++GF ++ N+ +A  +++ M  Q + PDV+TY+ ++ G+
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C    ++ +E I   M  +G+  +  +Y  +ING      + EA +   EM  +   PD
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPD 507



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 98/180 (54%), Gaps = 3/180 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +I  A   + EM  +G  PD +TYN++++A C++  +++A  L+  + G+G
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TY  L+ GLC+ G+ + A++V +++L  G + D   Y  ++   C K    EA 
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL---VPDNVLYTIII 177
            +  +M   G  PD  ++  +I       + D A    REM   GL   + D+++ +I++
Sbjct: 634 ALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALTDDLVASILV 693


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 256/457 (56%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +N +++++ +      A  L + +  KG++P + T N LIN  C  G+      V
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L+ G  PDT T NTL+   C K  + +A     ++  +G   + VS+ TLI    +
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+   +++      P+ V+Y+ II+  C+   V EA  +  EM  KG   DVVT
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T++ G C    L EA  L NEM+ + + P+ YT+  L+   CK+G + +A ++  +M 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  +KPD++TY+TL+DG+  V E++KA  ++  M    ++P+  +Y ILING+C    V 
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+ EM  K + P +V+ +++I G C+SG      + + +M   G   + I+Y++LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLI 416

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  +  ++D+A AL +KM++QG+ P+  T+ ++L G C+ GR+ D++ +   ++ KG +
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  TY  +I+GH  Q  L+EA     +M   G +PD
Sbjct: 477 LNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/454 (32%), Positives = 254/454 (55%), Gaps = 7/454 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I      L ++ ++G  PDTVT NTLI   C +G +++A    + +  +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +LING+CK G    A ++L ++      P+   Y+T++   C+ + +SEA 
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ +G++ D+V++STLI  F   G+L  A+    EM    + P+   Y I+++  
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 181 CRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G V EA  +   ML K CV  DV+TY+T+++G      + +A  +FN M   GV PD
Sbjct: 280 CKEGKVKEAKSVLAVML-KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+T LI+G CK+  +++ALNLF  M QK++ P IVTY++LIDG CK G +     L  
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R    N I+Y  LI+G C  GH+  A  L+ +M  +GI+P   +   ++ G C+ G
Sbjct: 399 EMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 458

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A E    ++++G   +  +YN +I+G  ++  +++A  ++SKME+ G +PD +T+ 
Sbjct: 459 RLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFE 518

Query: 420 VILTGFCRQ---GRMHDSELILWRMIE--KGLNP 448
           +I+    ++   G     +  +W ++E  KG  P
Sbjct: 519 IIIIALFKKDENGGNVGFDKKVWEIVEHKKGETP 552



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 243/457 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++  K     +A      +E KG+ PD +T N LIN +C  G +   F ++  +  +G
Sbjct: 65  ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T N+LI GLC KG+  +A    D++L  G   +  +Y TL+   C+  +   A 
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 184

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  ++  R   P++V +ST+I    +   +  A   F EM   G+  D V Y+ +I G+
Sbjct: 185 KLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA+ + +EM+ K    +V TYN +++ LC+   + EA  +   ML+  V PD 
Sbjct: 245 CIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDV 304

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TL+ G+     + KA ++F+ M+   + PD+ TY  LI+GFCK   +++A  L+ +
Sbjct: 305 ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKE 364

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P  ++Y  LI+G C  G +   + L  EM  +G    +++ +++I G C++G 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGH 424

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A    +KM  +G+ P++ ++  L++G  +   +  A  +   +  +G   +V TYNV
Sbjct: 425 LDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           ++ G C+QG + ++  +L +M + G  PD  T+  +I
Sbjct: 485 MIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 212/403 (52%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D A    + ML M  +P    +N +L    + ++ S A  +   +  +G+ PD+++ + L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F   GQ+        ++   G  PD V    +I G C  G V +AL   D++L +G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
            ++ V+Y T++NG+C+      A  L  ++  R   P+   ++T+I   CK   +++A  
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           LF  MT K I  D+VTY+TLI GFC  G++++A  L  +M+ + I+PN  +Y IL++  C
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G V EA  +   M+   +KP +++ +T++ GY    +  KA    + M   GV PD  
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y  LINGF + + +D+A  L  +M  + +VP ++TY+ ++ G C+ GR+     ++  M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++G   +  TY++LI+G     +L  A    ++M  +G  P+
Sbjct: 401 HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPN 443



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 195/368 (52%), Gaps = 2/368 (0%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           +N+ +A   F  M      P I+ F+ ++  F++      A+     ++  G+ PD +  
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            I+IN +C  G +     +  ++L++G   D VT NT++ GLC    + +A    +++L 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           +G   +  ++ TLI+G CK G+   A+ L   +  +  KP++V Y+T+ID  CK   + +
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L+++M  + IS + ++Y  LI G+C  G + EA  L  EMV K I P + + N ++ 
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C+ G   +A   L+ M+   V PD I+Y+TL++G+     + KA  + + M   G+ P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 414 DVITYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           DV TY +++ GFC+  +M D  L L++ M +K + P   TY++LI+G      +   +  
Sbjct: 338 DVHTYTILINGFCKN-KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 473 HDEMLQRG 480
            DEM  RG
Sbjct: 397 IDEMHDRG 404



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 171/333 (51%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D A+  F  M      P  + +  I++ + +      A+ +   +  KG   D++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++N  C    +T    +  ++L+RG  PD  T  TLI G C  G + KAL+  D +  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            + + V+Y TLI+G CK+G+   A KL   +  R   PN + Y  +I+  C    V+EA+
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L+ EM  KGI   +V+ +T+I G+C  G   +A   L++MV + ++P+  +YN L++  
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +E  + +A ++++ M    + PDVITY+ ++ G+     +  ++ +   M   G+ PD 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            TYT LING      + EA     EM Q+  VP
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 147/260 (56%), Gaps = 2/260 (0%)

Query: 189  ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
            A+ +   +  KG   D+ T N ++N  C    +T    +  ++L+RG  PD  TFTTLI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 249  GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
            G C  G +NKAL+  D +  +  + + V+Y TLI+G CK+G+   A KL   +  R   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 309  NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
            + + Y  +I+  C    V++A+ L++EM  KGI   +V+ NT+I G+C  G   +A   L
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 369  SKMVSEGVDPDSISYNTLINGFVRE--ENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            +KMV + ++P+  +YN L++   +E  + +D++ +++SKME+ G   + +T+ +I++   
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 427  RQGRMHDSELILWRMIEKGL 446
             +      E +L  MI +GL
Sbjct: 1185 EKDENDKVEKLLHEMIARGL 1204



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 2/265 (0%)

Query: 114  ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
            ++ S A  +   +  +G+ PD+ + + LI  F   GQ+        ++   G  PD + +
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 174  TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            T +ING C  G V +AL   D++L +G  ++ V+Y T++NG+C+      A  L  ++  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 234  RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            R   PD   + T+I   CK   ++KA  LF  M  K I  D+VTYNTLI GFC VG++++
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 294  ANKLWADMISRKISPNYISYGILINGYCSMGH--VTEAFRLWYEMVGKGIKPTLVSCNTI 351
            A  L   M+ + I+PN  +Y IL++  C  G   + E+  +  +M   G K   V+   I
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179

Query: 352  IKGYCRSGDASKADEFLSKMVSEGV 376
            I       +  K ++ L +M++ G+
Sbjct: 1180 ISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 138/249 (55%), Gaps = 2/249 (0%)

Query: 95   GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
            G+ PD  T N L+   C    ++    I  ++ +RG  PD ++F+TLI      GQ+++A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 155  LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
            L +  ++ + G   + V Y  +ING C+ G    A+K+  ++  +    DVV YNTI++ 
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 215  LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
            LC+ +++++A  LF EM  +G+  D  T+ TLI+G C  G + +A+ L + M  K+I P+
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 275  IVTYNTLIDGFCKVGE--MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            + TYN L+D  CK G+  ++++  + + M       N +++ I+I+         +  +L
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195

Query: 333  WYEMVGKGI 341
             +EM+ +G+
Sbjct: 1196 LHEMIARGL 1204



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 140/266 (52%), Gaps = 2/266 (0%)

Query: 219  KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
            K  + A  L + +  +G+ PD +T   LI+  C  G +    ++   + ++   PD +T+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 279  NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
             TLI+G C  G++ KA      ++++    N +SYG LING C +G    A +L  ++ G
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 339  KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            +  KP +V  NTII   C+    SKA     +M  +G+  D ++YNTLI GF     + +
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 399  AFALVSKMENQGLVPDVITYNVILTGFCRQGR--MHDSELILWRMIEKGLNPDRSTYTTL 456
            A  L++KM  + + P+V TYN+++   C++G+  + +S  +L +M + G   +  T+  +
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179

Query: 457  INGHVSQNNLKEAFRFHDEMLQRGFV 482
            I+    ++   +  +   EM+ RG +
Sbjct: 1180 ISALFEKDENDKVEKLLHEMIARGLL 1205



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 133/254 (52%), Gaps = 6/254 (2%)

Query: 237 FPDFYTF---TTLIHGHCKD---GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
            P+F +F   ++  H H +     N++ A++ F+ M      P I+ +N ++D F K+  
Sbjct: 15  IPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKH 74

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
              A  L   +  + I P+ I+  ILIN +C MG +T  F +  +++ +G  P  V+ NT
Sbjct: 75  YSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNT 134

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +IKG C  G   KA  F  K++++G   + +SY TLING  +  +   A  L+ K++ + 
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRL 194

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
             P+V+ Y+ I+   C+   + ++  +   M  KG++ D  TY+TLI G   +  LKEA 
Sbjct: 195 TKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI 254

Query: 471 RFHDEMLQRGFVPD 484
              +EM+ +   P+
Sbjct: 255 GLLNEMVLKTINPN 268



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 134/258 (51%), Gaps = 2/258 (0%)

Query: 49   AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
            A  L + +  KG++P +FT N LIN  C  G+      +L ++L+ G  PDT T+ TL+ 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 109  ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
              C K  +++A     ++  +G   + VS+ TLI    + G    A+   R++      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 169  DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
            D V+Y  II+  C++  V +A  +  EM  KG   DVVTYNT++ G C    L EA  L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 229  NEMLERGVFPDFYTFTTLIHGHCKDGN--MNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
            N+M+ + + P+  T+  L+   CK+G   ++++L++   M     K + VT+  +I    
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 287  KVGEMEKANKLWADMISR 304
            +  E +K  KL  +MI+R
Sbjct: 1185 EKDENDKVEKLLHEMIAR 1202



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 125/229 (54%), Gaps = 3/229 (1%)

Query: 231  MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
            M ERGV      +  + H   K  + + A++L   +  K I+PD+ T N LI+ FC +G+
Sbjct: 920  MAERGV-TSVGAYIRIPHNPMK--HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQ 976

Query: 291  MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
            +     + A ++ R   P+ I++  LING C  G V +A     +++ +G +   VS  T
Sbjct: 977  ITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGT 1036

Query: 351  IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
            +I G C+ GD   A + L K+      PD + YNT+I+   + + + KA+ L  +M  +G
Sbjct: 1037 LINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKG 1096

Query: 411  LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            +  DV+TYN ++ GFC  G++ ++  +L +M+ K +NP+  TY  L++ 
Sbjct: 1097 ISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDA 1145



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 130/239 (54%), Gaps = 2/239 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++N  C   +I      L ++ ++G +PDT+T+ TLIN  C +G + +A    + +  +G
Sbjct: 967  LINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQG 1026

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             +    +Y +LING+CK G    A ++L ++      PD   YNT++   C+ + +S+A 
Sbjct: 1027 FQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAY 1086

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +F EM+ +G++ D+V+++TLI  F   G+L  A+    +M    + P+   Y I+++  
Sbjct: 1087 GLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDAL 1146

Query: 181  CRNG--FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            C+ G   + E+L M  +M + GC  + VT+  I++ L       + + L +EM+ RG+ 
Sbjct: 1147 CKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 96/181 (53%)

Query: 304  RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
            + I P+  +  ILIN +C MG +T  F +  +++ +G  P  ++  T+I G C  G  +K
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 364  ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
            A  F  K++++G   + +SY TLING  +  +   A  L+ K++ +   PDV+ YN I+ 
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 424  GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              C+   +  +  + + M  KG++ D  TY TLI G      LKEA    ++M+ +   P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 484  D 484
            +
Sbjct: 1135 N 1135



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 79/162 (48%)

Query: 323  MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            M H + A  L + +  KGI+P L + N +I  +C  G  +     L+K++  G  PD+I+
Sbjct: 939  MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998

Query: 383  YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
            + TLING   +  ++KA     K+  QG   + ++Y  ++ G C+ G    +  +L ++ 
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 443  EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +   PD   Y T+I+       + +A+    EM  +G   D
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISAD 1100


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 252/480 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C+     SA   L ++  +G   D    N ++NA C +G ++EA  L+  +   G
Sbjct: 200 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 259

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V +YN+++ GLC   R    +E+++EM++M   P+  T+NTL+   CR        
Sbjct: 260 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 319

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M   G  PDI  ++T+I    + G L+ A      M S GL P+ V Y  ++ G 
Sbjct: 320 EVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGL 379

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      E  ++  EM +K C +D VT+N +++  C+  ++    +L  +MLE G  PD 
Sbjct: 380 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDV 439

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TT+I+G CK+G +++A+ L   MT    KP+ ++Y  ++ G C       A  L + 
Sbjct: 440 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 499

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +    N I++  LIN  C  G V +A  L  +M+  G  P L+S +T+I G  ++G 
Sbjct: 500 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 559

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L+ MV++G+ P++I Y+++ +   RE  ++K   +   +++  +  D + YN 
Sbjct: 560 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 619

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++  C++G    +   L  M+  G  P+ STYT LI G  S+  +KEA     E+  +G
Sbjct: 620 VISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 209/417 (50%), Gaps = 3/417 (0%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           YN+++ G C+ G+ + A+ +      + + P+  TY  ++   C +  +++A  +  EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           RRG AP    +  ++    R G    A+    ++ + G   D     +++N  C  G V 
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EAL +  ++   GC  DVV+YN +L GLC AK      +L  EM+     P+  TF TLI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
              C++G   +   +   M +    PDI  Y T+IDG CK G +E A+++   M S  + 
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN + Y  L+ G CS     E   L  EM  K      V+ N ++  +C++G   +  E 
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           L +M+  G  PD I+Y T+INGF +E  +D+A  L+  M   G  P+ I+Y ++L G C 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             R  D+E ++ +MI++G   +  T+ TLIN    +  +++A     +ML  G  PD
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 543



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 132/278 (47%), Gaps = 3/278 (1%)

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ G CRA  L  A  L   +    V P+ YT+  ++   C  G +  AL + D M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++   P    Y+ +++  C+ G    A ++  D+ +R  + +  +  +++N  C  G V 
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L  ++   G +P +VS N ++KG C +       E + +MV     P+ +++NTLI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   R    ++   ++++M   G  PD+  Y  I+ G C++G +  +  IL RM   GL 
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           P+   Y TL+ G  S    +E      EM  +    DD
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 404


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 254/484 (52%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC  ++ + A  + L  M + G  P+  +Y+ ++   C     + A  L   M+  
Sbjct: 198 LLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKE 257

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V  YN++I+G  K+G   +A  +  EM + G+ PD  TYN ++   C+   M 
Sbjct: 258 GGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +AE +  +M+  G  PD V+++ +I  ++  G+L  A   FR+MKS GL+P+ V+    +
Sbjct: 318 KAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFL 377

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
              C++G   EA ++ D M  KG   D+V+Y T+L+G        +   LFN M   G+ 
Sbjct: 378 ASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIA 437

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            D   F  LIH + K G ++ A+ +F  M Q+ + PD+VTY+T+I  F ++G +  A + 
Sbjct: 438 ADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEK 497

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI-KPTLVSCNTIIKGYC 356
           +  M++R I PN   Y  +I G+C  G + +A  L  EM+ KGI +P +V  N++I   C
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLC 557

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G    A +    +   G  PD I++ +LI+G+     MDKAF ++  ME  G+  D++
Sbjct: 558 KDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIV 617

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY+ +L G+ + GR++D   +   M  KG+ P+  TY  ++ G         A +   EM
Sbjct: 618 TYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677

Query: 477 LQRG 480
           ++ G
Sbjct: 678 IESG 681



 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 158/505 (31%), Positives = 261/505 (51%), Gaps = 36/505 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK   +D A++ L +M   G  PDTVTYN +I+ Y   G L+EA ++   M  +G
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRG 365

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL------------- 107
           L P +   NS +  LCK GR   A E+ D M   G  PD  +Y TLL             
Sbjct: 366 LIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMI 425

Query: 108 -----------VESCRKENM-----------SEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                         CR  N+            +A  IF EM ++GV+PD+V++ST+I  F
Sbjct: 426 GLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAF 485

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-D 204
           SR G+L  A+  F +M + G+ P+  +Y  II G+C +G +++A ++  EM+ KG    D
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +V +N+++N LC+   + +A D+F+ + + G  PD  TFT+LI G+C  G M+KA  + D
Sbjct: 546 IVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILD 605

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M    ++ DIVTY+TL+DG+ K G +     L+ +M  + + PN ++YGI++ G    G
Sbjct: 606 AMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               A + ++EM+  G   T+     I+ G CR+  A +A     K+ +  V       N
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           T+IN   + +  ++A  L + +   GL+P+  TY V++    + G + D+  +   M + 
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKS 785

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEA 469
           G+ P       +I   + +  + +A
Sbjct: 786 GIVPGSRLLNRIIRMLLEKGEIAKA 810



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 252/487 (51%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K+ +   A     EM ++GV PD VTYN +I+A C+   +++A  ++  M+  G
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TYN +I+G    GR   A ++  +M   GL P+    N+ L   C+     EA 
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF  M+ +G  PDIVS+ TL+  ++  G     +  F  MKS G+  D  ++ I+I+ Y
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V +A+ +  EM ++G   DVVTY+T+++   R   LT+A + FN+M+ RG+ P+ 
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSI-KPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             + ++I G C  G + KA  L   M  K I +PDIV +N++I+  CK G +  A+ ++ 
Sbjct: 511 AVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFD 570

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +      P+ I++  LI+GYC +G + +AF++   M   G++  +V+ +T++ GY ++G
Sbjct: 571 LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNG 630

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             +       +M  +GV P++++Y  ++ G  R      A     +M   G    V  Y 
Sbjct: 631 RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +IL G CR     ++ ++  ++    +    +   T+IN        +EA      +   
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750

Query: 480 GFVPDDA 486
           G +P+++
Sbjct: 751 GLLPNES 757



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 211/421 (50%), Gaps = 16/421 (3%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE--------AEEIFCEMSRRGVAP 133
           D A  + DE+ +        + N  L    R  + S         A  +F  + R    P
Sbjct: 91  DDAHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGP 150

Query: 134 DIV-----SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            +V     ++S L+    R  + D  L+ F  +   GL    +  + ++   C      E
Sbjct: 151 RVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210

Query: 189 ALK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG--VFPDFYTFTT 245
           A+  +   M E GCV +V +Y+ IL GLC   M   A DLF  M + G    P+   + T
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNT 270

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           +IHG  K+G   KA +LF  MT++ +KPD+VTYN +ID  CK   M+KA  +   M +  
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ ++Y  +I+GY ++G + EA +++ +M  +G+ P +V CN+ +   C+ G + +A 
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E    M ++G  PD +SY TL++G+  E        L + M++ G+  D   +N+++  +
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            ++G + D+ LI   M ++G++PD  TY+T+I+       L +A    ++M+ RG  P+ 
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510

Query: 486 A 486
           A
Sbjct: 511 A 511



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 216/394 (54%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K   +D A +   EM+Q+GV PD VTY+T+I+A+ R G L +A +  N M  +G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKENMSEA 119
           ++P    Y+S+I G C  G   +AKE++ EM+  G+  PD   +N+++   C+   + +A
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDA 565

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +IF  ++  G  PD+++F++LI  +   G++D+A      M+  G+  D V Y+ +++G
Sbjct: 566 HDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDG 625

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y +NG + + L +  EM  KG   + VTY  +L GL RA     A   F+EM+E G    
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT 685

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  ++ G C++   ++A+ LF  +   ++K  I   NT+I+   KV   E+A +L+A
Sbjct: 686 VSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFA 745

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +YG++I      G V +A  ++  M   GI P     N II+     G
Sbjct: 746 TISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           + +KA  +LSK+  + +  ++ + + +++ F R+
Sbjct: 806 EIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRK 839



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 209/420 (49%), Gaps = 1/420 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            M+  G+  D   +N LI+AY + G +++A  +   M  +G+ P V TY+++I+   + G
Sbjct: 430 SMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMG 489

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA-PDIVSF 138
           R   A E  ++M+  G+ P+TA Y++++   C    + +A+E+  EM  +G+  PDIV F
Sbjct: 490 RLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFF 549

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           +++I    ++G++  A   F  +   G  PD + +T +I+GYC  G + +A K+ D M  
Sbjct: 550 NSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G   D+VTY+T+L+G  +   + +   LF EM  +GV P+  T+  ++ G  + G    
Sbjct: 610 VGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A   F  M +      +  Y  ++ G C+    ++A  L+  + +  +  +      +IN
Sbjct: 670 ARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMIN 729

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
               +    EA  L+  +   G+ P   +   +I    + G    A+   S M   G+ P
Sbjct: 730 AMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVP 789

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
            S   N +I   + +  + KA   +SK++ + ++ +  T +++L+ F R+G+ H+   +L
Sbjct: 790 GSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 163/505 (32%), Positives = 266/505 (52%), Gaps = 28/505 (5%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K+ ++D       +M    V P T T+N LI+A C  G+LE A ++ + MS KG KP  F
Sbjct: 130 KESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEF 189

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           +   L+ G C+ G      ++LDEM   G  P+   YNT++   C +    EAE++  +M
Sbjct: 190 SLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKM 249

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK---SAGLV-PDNVLYTIIINGYCR 182
              G++PDIV+F+  I    ++GQ+  A   FR+M+     GL  P+ V Y +++ G+C 
Sbjct: 250 REVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCS 309

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G   EA  + D M +    + + +YN  + GL R+  L EA  + NEM E+ + P+ Y+
Sbjct: 310 EGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYS 368

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +  L+HG CK G  + A ++  +M +  + PD VTY+TL+ G+C+ G++ +AN +  +MI
Sbjct: 369 YNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMI 428

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
                PN  +  IL++     G  +EA  L   M  +G     V+CNT+I G C++G+  
Sbjct: 429 QVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLD 488

Query: 363 KADEFLSKMVSEG-----------VD------------PDSISYNTLINGFVREENMDKA 399
           KA E +S M + G           +D            PDSI+Y T+I G  +   +D+A
Sbjct: 489 KAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEA 548

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
              + +M  + L PD + ++  +  +C+QG++  +  +L  M +KG N    TY +LI G
Sbjct: 549 KKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQG 608

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
             S+N + E +   DEM +RG  P+
Sbjct: 609 LGSENQIFEIYGLMDEMKERGIFPN 633



 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 149/518 (28%), Positives = 262/518 (50%), Gaps = 61/518 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC+   +++A+    +M +KG  P+  +   L+  YCR G       L++ M   G
Sbjct: 159 LISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSG 218

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    YN++I+ LC +G+   A++++++M ++GLSPD  T+N  +   C+   + EA 
Sbjct: 219 ALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEAS 278

Query: 121 EIFCEMS---RRGVA-PDIVSFSTLI------GIFS------------------------ 146
            IF +M      G+  P+ V+++ ++      G+F                         
Sbjct: 279 RIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWM 338

Query: 147 ----RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               R+G+L  A +   EM    + P+   Y I+++G C+ G   +A  +   M E G  
Sbjct: 339 LGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVA 398

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D VTY+T+L+G CR   + EA+ +  EM++ G FP+ YT   L+H   K+G  ++A +L
Sbjct: 399 PDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDL 458

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR------------------ 304
             +M ++    D VT NT+I+G CK G ++KA ++ + M +R                  
Sbjct: 459 LQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDI 518

Query: 305 -----KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                K  P+ I+Y  +I G C +G V EA +   EM+GK + P  +  +T I  YC+ G
Sbjct: 519 RNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQG 578

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S A   L +M  +G +    +YN+LI G   E  + + + L+ +M+ +G+ P+V TYN
Sbjct: 579 KLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYN 638

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            I++     G++ D+  +L  M++KG++P+  T+  LI
Sbjct: 639 NIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILI 676



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 241/534 (45%), Gaps = 66/534 (12%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK--PGVFT 67
           +ID     L    +   +P   +   L+      G LE A     S+  +     P +  
Sbjct: 64  QIDHLHQLLLSQHRDFAHPSGFS---LVRTLADLGLLENAISQFRSLRDRFPHDPPPISF 120

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           YN L     K+ R D    +  +M    + P T T+N L+   C    +  A E+F +MS
Sbjct: 121 YNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMS 180

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
            +G  P+  S   L+  + R G     +    EM+S+G +P+ V Y  +I+  C  G  +
Sbjct: 181 EKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTV 240

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML---ERGV-FPDFYTF 243
           EA K+ ++M E G   D+VT+N  +  LC++  + EA  +F +M    E G+  P+  T+
Sbjct: 241 EAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTY 300

Query: 244 TTLIHGHCKDGNMNKALNLFDI----------------------------------MTQK 269
             ++ G C +G   +A  +FD                                   M +K
Sbjct: 301 NLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEK 360

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
           +IKP++ +YN L+ G CK G    A  +   M    ++P+ ++Y  L++GYC  G + EA
Sbjct: 361 NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEA 420

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             +  EM+  G  P + +CN ++    + G AS+A++ L  M   G   D+++ NT+ING
Sbjct: 421 NYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMING 480

Query: 390 FVREENMDKAFALVSKMENQG-----------------------LVPDVITYNVILTGFC 426
             +  N+DKA  +VS M  +G                        +PD ITY  I+ G C
Sbjct: 481 LCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLC 540

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + GR+ +++  L  MI K L+PD   + T I  +  Q  L  AFR   EM ++G
Sbjct: 541 KVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 246/538 (45%), Gaps = 62/538 (11%)

Query: 2   VNALCKDHKIDSAKMFLCEM---EQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           + ALCK  +I  A     +M   E+ G+  P+TVTYN ++  +C EG  EEA  + +SM 
Sbjct: 265 IAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMK 324

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
                  + +YN  + GL + G+   A  +L+EM +  + P+  +YN L+   C+    S
Sbjct: 325 NSE-TLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFS 383

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A  I   M   GVAPD V++STL+  + R G++  A    REM   G  P+     I++
Sbjct: 384 DARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILL 443

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-- 235
           +   + G   EA  +   M E+G  +D VT NT++NGLC+A  L +A ++ + M  RG  
Sbjct: 444 HSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSA 503

Query: 236 ---------------------VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
                                  PD  T+ T+I G CK G +++A      M  K + PD
Sbjct: 504 SLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPD 563

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
            + ++T I  +CK G++  A ++  +M  +  + +  +Y  LI G  S   + E + L  
Sbjct: 564 SLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMD 623

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR-- 392
           EM  +GI P + + N II      G    A   L +M+ +G+ P+  ++  LI  F +  
Sbjct: 624 EMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKAC 683

Query: 393 -----EENMDKAFALVSKME---------------------------NQGLVPDVITYNV 420
                +E  + A +L    E                           ++ L      Y  
Sbjct: 684 DFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRD 743

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++   C+ G++ D+  IL +M++K  + D +++  +I+    + +   A  F + M++
Sbjct: 744 LIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 221/491 (45%), Gaps = 64/491 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK      A+  L  M + GV PDTVTY+TL++ YCR G + EA  ++  M   G
Sbjct: 372 LVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVG 431

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P ++T N L++ L K+GR   A+++L  M + G   D  T NT++   C+  N+ +A 
Sbjct: 432 CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAI 491

Query: 121 EIFCEMSRRGVA-----------------------PDIVSFSTLIGIFSRNGQLDRALMY 157
           EI   M  RG A                       PD ++++T+IG   + G++D A   
Sbjct: 492 EIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKK 551

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
             EM    L PD++++   I  YC+ G +  A ++  EM +KGC   + TYN+++ GL  
Sbjct: 552 LLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGS 611

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              + E   L +EM ERG+FP+ YT+  +I    + G +  A  L D M QK I P+I T
Sbjct: 612 ENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYT 671

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           +  LI  F K                                 C  G   E F +   + 
Sbjct: 672 FRILIGAFFKA--------------------------------CDFGAAQELFEIALSLC 699

Query: 338 GKGIKPTLVS--CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           G   K +L S   N ++ G    G+  KA E     +   +   +  Y  LI    ++  
Sbjct: 700 GH--KESLYSFMFNELLAG----GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGK 753

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +D A  ++ KM ++    D  ++  ++    ++G  H ++    RM+E     D + +  
Sbjct: 754 LDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFNEHEN 813

Query: 456 L-INGHVSQNN 465
             I G ++ N+
Sbjct: 814 KNIRGRLNNND 824


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 256/480 (53%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +L K+ K + +   L EM   G  PD   +N ++  + R   +E+A ++   M   G
Sbjct: 16  IIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP   +Y+ LI+GL K G+ D + ++L EM+  G +P    Y++L+    +   +  A 
Sbjct: 76  YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHAS 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM R G  PD + F  LI    + G++  A   F++M   G  P+  +Y ++++G 
Sbjct: 136 SLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGL 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + +A  +  EM    C  DVVTYNT+L+ +C+A+ + E   LF  M   G  P+ 
Sbjct: 196 CSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNV 255

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+TLIHG C+ G + KAL +F  M +   KP+  TY TLI G C+  ++ +A +L+  
Sbjct: 256 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEK 315

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV-GKGIKPTLVSCNTIIKGYCRSG 359
           M    I P+ ++Y  LI GYC  G + EA +L+ EM  G G++PT+V+ NT+I G+C+ G
Sbjct: 316 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 375

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+E +++M ++G+  DS +Y  LI G  R   +D+A  +  +M  +  + D ++  
Sbjct: 376 KLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 435

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             + G C+ G +  +  +     + G  P+  T+  L    +    +++A +  +    R
Sbjct: 436 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 495



 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 247/465 (53%), Gaps = 1/465 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  K +  +  TY+++I +  +E   EE+++++  M   G  P VF +N ++ G  +   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            ++A+EV   M++ G  PD  +Y+ L+    +   + E+ +I  EM  RG  P + ++S+
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+   ++  ++D A   F EM   G  PD +++  +I G C+ G V +A +   +M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  +V  YN +L+GLC +  L +A+ LF EM      PD  T+ TL+   CK   + +  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            LF+ M      P+++T++TLI G C+ GE+EKA +++  M+     PN  +Y  LI+G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPD 379
           C    V +A  L+ +M    I P  V+ N++I GYC+ G   +A++   +M    G+ P 
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            +++NTLI+GF +   + +A  LV++M  +GL  D  TY +++ G  R  ++ ++  +  
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +M EK    D  +  + + G     N+ +A+   +   + G VP+
Sbjct: 421 QMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 465



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 172/308 (55%), Gaps = 1/308 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   +++ A     EM+     PD VTYNTL++A C+   +EE  +L  +M   G
Sbjct: 191 LLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG 250

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+++LI+GLC+ G  ++A EV   ML+ G  P+  TY TL+   CR E + +A 
Sbjct: 251 YVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAR 310

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS-AGLVPDNVLYTIIING 179
           E+F +M++  + PD V++++LI  + + G +D A   +REM   AGL P  V +  +I+G
Sbjct: 311 ELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDG 370

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G +  A ++  EM  KG   D  TY  ++ GL RA  L EA +++ +M E+    D
Sbjct: 371 FCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLD 430

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             +  + + G CK GN+++A  +F+   +    P+  T+  L +   K+G +E A KL  
Sbjct: 431 PVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490

Query: 300 DMISRKIS 307
              +R I+
Sbjct: 491 PAKARDIT 498



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 43/80 (53%)

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M ++ +  +V TY+ I+    ++ +  +S  +L  M+  G NPD   +  ++ G    NN
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
           +++A   +  M++ G+ PD+
Sbjct: 61  MEKAREVYQHMVESGYKPDN 80


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 163/505 (32%), Positives = 266/505 (52%), Gaps = 28/505 (5%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K+ ++D       +M    V P T T+N LI+A C  G+LE A ++ + MS KG KP  F
Sbjct: 130 KESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEF 189

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           +   L+ G C+ G      ++LDEM   G  P+   YNT++   C +    EAE++  +M
Sbjct: 190 SLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKM 249

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK---SAGLV-PDNVLYTIIINGYCR 182
              G++PDIV+F+  I    ++GQ+  A   FR+M+     GL  P+ V Y +++ G+C 
Sbjct: 250 REVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCS 309

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G   EA  + D M +    + + +YN  + GL R+  L EA  + NEM E+ + P+ Y+
Sbjct: 310 EGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYS 368

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +  L+HG CK G  + A ++  +M +  + PD VTY+TL+ G+C+ G++ +AN +  +MI
Sbjct: 369 YNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMI 428

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
                PN  +  IL++     G  +EA  L   M  +G     V+CNT+I G C++G+  
Sbjct: 429 QVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLD 488

Query: 363 KADEFLSKMVSEG-----------VD------------PDSISYNTLINGFVREENMDKA 399
           KA E +S M + G           +D            PDSI+Y T+I G  +   +D+A
Sbjct: 489 KAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEA 548

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
              + +M  + L PD + ++  +  +C+QG++  +  +L  M +KG N    TY +LI G
Sbjct: 549 KKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQG 608

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
             S+N + E +   DEM +RG  P+
Sbjct: 609 LGSENQIFEIYGLMDEMKERGIFPN 633



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 149/518 (28%), Positives = 262/518 (50%), Gaps = 61/518 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC+   +++A+    +M +KG  P+  +   L+  YCR G       L++ M   G
Sbjct: 159 LISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSG 218

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    YN++I+ LC +G+   A++++++M ++GLSPD  T+N  +   C+   + EA 
Sbjct: 219 ALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEAS 278

Query: 121 EIFCEMS---RRGVA-PDIVSFSTLI------GIFS------------------------ 146
            IF +M      G+  P+ V+++ ++      G+F                         
Sbjct: 279 RIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWM 338

Query: 147 ----RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               R+G+L  A +   EM    + P+   Y I+++G C+ G   +A  +   M E G  
Sbjct: 339 LGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVA 398

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D VTY+T+L+G CR   + EA+ +  EM++ G FP+ YT   L+H   K+G  ++A +L
Sbjct: 399 PDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDL 458

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR------------------ 304
             +M ++    D VT NT+I+G CK G ++KA ++ + M +R                  
Sbjct: 459 LQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDI 518

Query: 305 -----KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                K  P+ I+Y  +I G C +G V EA +   EM+GK + P  +  +T I  YC+ G
Sbjct: 519 RNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQG 578

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S A   L +M  +G +    +YN+LI G   E  + + + L+ +M+ +G+ P+V TYN
Sbjct: 579 KLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYN 638

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            I++     G++ D+  +L  M++KG++P+  T+  LI
Sbjct: 639 NIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILI 676



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 241/534 (45%), Gaps = 66/534 (12%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK--PGVFT 67
           +ID     L    +   +P   +   L+      G LE A     S+  +     P +  
Sbjct: 64  QIDHLHQLLLSQHRDFAHPSGFS---LVRTLADLGLLENAISQFRSLRDRFPHDPPPISF 120

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           YN L     K+ R D    +  +M    + P T T+N L+   C    +  A E+F +MS
Sbjct: 121 YNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMS 180

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
            +G  P+  S   L+  + R G     +    EM+S+G +P+ V Y  +I+  C  G  +
Sbjct: 181 EKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTV 240

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML---ERGV-FPDFYTF 243
           EA K+ ++M E G   D+VT+N  +  LC++  + EA  +F +M    E G+  P+  T+
Sbjct: 241 EAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTY 300

Query: 244 TTLIHGHCKDGNMNKALNLFDI----------------------------------MTQK 269
             ++ G C +G   +A  +FD                                   M +K
Sbjct: 301 NLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEK 360

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
           +IKP++ +YN L+ G CK G    A  +   M    ++P+ ++Y  L++GYC  G + EA
Sbjct: 361 NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEA 420

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             +  EM+  G  P + +CN ++    + G AS+A++ L  M   G   D+++ NT+ING
Sbjct: 421 NYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMING 480

Query: 390 FVREENMDKAFALVSKMENQG-----------------------LVPDVITYNVILTGFC 426
             +  N+DKA  +VS M  +G                        +PD ITY  I+ G C
Sbjct: 481 LCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLC 540

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + GR+ +++  L  MI K L+PD   + T I  +  Q  L  AFR   EM ++G
Sbjct: 541 KVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 246/538 (45%), Gaps = 62/538 (11%)

Query: 2   VNALCKDHKIDSAKMFLCEM---EQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           + ALCK  +I  A     +M   E+ G+  P+TVTYN ++  +C EG  EEA  + +SM 
Sbjct: 265 IAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMK 324

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
                  + +YN  + GL + G+   A  +L+EM +  + P+  +YN L+   C+    S
Sbjct: 325 NSE-TLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFS 383

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A  I   M   GVAPD V++STL+  + R G++  A    REM   G  P+     I++
Sbjct: 384 DARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILL 443

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-- 235
           +   + G   EA  +   M E+G  +D VT NT++NGLC+A  L +A ++ + M  RG  
Sbjct: 444 HSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSA 503

Query: 236 ---------------------VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
                                  PD  T+ T+I G CK G +++A      M  K + PD
Sbjct: 504 SLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPD 563

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
            + ++T I  +CK G++  A ++  +M  +  + +  +Y  LI G  S   + E + L  
Sbjct: 564 SLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMD 623

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR-- 392
           EM  +GI P + + N II      G    A   L +M+ +G+ P+  ++  LI  F +  
Sbjct: 624 EMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKAC 683

Query: 393 -----EENMDKAFALVSKME---------------------------NQGLVPDVITYNV 420
                +E  + A +L    E                           ++ L      Y  
Sbjct: 684 DFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRD 743

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++   C+ G++ D+  IL +M++K  + D +++  +I+    + +   A  F + M++
Sbjct: 744 LIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 221/491 (45%), Gaps = 64/491 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK      A+  L  M + GV PDTVTY+TL++ YCR G + EA  ++  M   G
Sbjct: 372 LVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVG 431

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P ++T N L++ L K+GR   A+++L  M + G   D  T NT++   C+  N+ +A 
Sbjct: 432 CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAI 491

Query: 121 EIFCEMSRRGVA-----------------------PDIVSFSTLIGIFSRNGQLDRALMY 157
           EI   M  RG A                       PD ++++T+IG   + G++D A   
Sbjct: 492 EIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKK 551

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
             EM    L PD++++   I  YC+ G +  A ++  EM +KGC   + TYN+++ GL  
Sbjct: 552 LLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGS 611

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              + E   L +EM ERG+FP+ YT+  +I    + G +  A  L D M QK I P+I T
Sbjct: 612 ENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYT 671

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           +  LI  F K                                 C  G   E F +   + 
Sbjct: 672 FRILIGAFFKA--------------------------------CDFGAAQELFEIALSLC 699

Query: 338 GKGIKPTLVS--CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           G   K +L S   N ++ G    G+  KA E     +   +   +  Y  LI    ++  
Sbjct: 700 GH--KESLYSFMFNELLAG----GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGK 753

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +D A  ++ KM ++    D  ++  ++    ++G  H ++    RM+E     D + +  
Sbjct: 754 LDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFNEHEN 813

Query: 456 L-INGHVSQNN 465
             I G ++ N+
Sbjct: 814 KNIRGRLNNND 824


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 258/463 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L ++ ++D A     EM  +G+ P+ +TYN L++ YC  G  +EA  +   M   G
Sbjct: 212 VINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDG 271

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYN+L+  LCK GR   A++V D M++ G  PD++ Y TLL     +  + +  
Sbjct: 272 VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMH 331

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M R G  PD   F+ LIG ++++G +D A++ F +M+  GL P+ V Y  +++  
Sbjct: 332 QLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDAL 391

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V +A+   D ++ +G   + V + T+++GLC      +A++L  EM+ RG+ P+ 
Sbjct: 392 CRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNT 451

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F TL++  CK+G + +A N+FD+M +  ++ D++TY TLIDG+C  G++++A KL   
Sbjct: 452 IFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEG 511

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN ++Y  +INGYC  G + +A  L+ +M  KG+ P +V  +TI+ G  ++  
Sbjct: 512 MVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRR 571

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E    M+  G+     +YN ++ G  +    D A  +   +          T+N+
Sbjct: 572 IAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNI 631

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           ++    + GR  +++ +   ++ +GL P+  TY  ++   + Q
Sbjct: 632 MIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQ 674



 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 264/481 (54%), Gaps = 8/481 (1%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM--- 56
           ++  LC D +  D+  + L  M   G  P+  +YN L+   C E   ++A  L+++M   
Sbjct: 137 LLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMAD 196

Query: 57  -SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
            +  G  P V +Y ++INGL ++G+ D+A  + DEML  G+SP+  TYN LL   C    
Sbjct: 197 DTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGK 256

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
             EA  IF +M R GV PD+V+++TL+    +NG+   A   F  M   G  PD+ +Y  
Sbjct: 257 PKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGT 316

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +++GY   G++++  ++ D M+  G   D   +N ++    +  M+ EA   F++M ++G
Sbjct: 317 LLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG 376

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P+  T+ T++   C+ G ++ A++ FD +  + + P+ V + TLI G C   + +KA 
Sbjct: 377 LHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAE 436

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           +L  +MI R I PN I +  L+N  C  G VT A  ++  MV   ++  +++  T+I GY
Sbjct: 437 ELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGY 496

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C  G   +A + L  MV +GV P+ ++YNT+ING+ +   ++ A +L  +M ++G+ P +
Sbjct: 497 CLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGI 556

Query: 416 ITYNVILTGFCRQGRMHDS-ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR-FH 473
           + Y+ IL G  +  R+  + EL LW MI+ G+     TY  ++ G    N   +A R FH
Sbjct: 557 VIYSTILHGLFQTRRIAAAKELYLW-MIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFH 615

Query: 474 D 474
           +
Sbjct: 616 N 616



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/488 (31%), Positives = 252/488 (51%), Gaps = 4/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEM----EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM 56
           ++  LC +++   A   L  M     + G  PD V+Y T+IN   REG L++A+ L + M
Sbjct: 173 LLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM 232

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
             +G+ P   TYN L++G C  G+   A  +  +M + G+ PD  TYNTL+V  C+    
Sbjct: 233 LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRS 292

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            EA ++F  M ++G  PD   + TL+  ++  G L +       M   G  PD+ ++ I+
Sbjct: 293 MEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNIL 352

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I  Y ++G V EA+    +M ++G   ++VTY T+++ LCR   + +A   F+ ++  G+
Sbjct: 353 IGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGL 412

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+   F TLIHG C     +KA  L   M  + I P+ + +NTL++  CK G + +A  
Sbjct: 413 TPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKN 472

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           ++  M+   +  + I+Y  LI+GYC  G V EA +L   MV  G+KP  V+ NTII GYC
Sbjct: 473 IFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYC 532

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           ++G    A     +M S+GV+P  + Y+T+++G  +   +  A  L   M   G+   + 
Sbjct: 533 KNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIG 592

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN+IL G C+     D+  +   +     +    T+  +I+  +      EA      +
Sbjct: 593 TYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASL 652

Query: 477 LQRGFVPD 484
           L RG VP+
Sbjct: 653 LARGLVPN 660



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 221/462 (47%), Gaps = 40/462 (8%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV- 87
           D  TY+ +I    R G L+ AF  +  +   G      T++ L+ GLC   R   A ++ 
Sbjct: 95  DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM----SRRGVAPDIVSFSTLIG 143
           L  M  +G +P+  +YN LL   C +    +A  +   M    +R G  PD+VS      
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVS------ 208

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
                                        YT +ING  R G + +A  + DEML++G   
Sbjct: 209 -----------------------------YTTVINGLLREGQLDKAYCLFDEMLDQGMSP 239

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           + +TYN +L+G C +    EA  +F +M   GV PD  T+ TL+   CK+G   +A  +F
Sbjct: 240 NCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVF 299

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D M +K  KPD   Y TL+ G+   G + + ++L   M+     P++  + ILI  Y   
Sbjct: 300 DSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKH 359

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G V EA   + +M  +G+ P +V+  T++   CR G    A     +++SEG+ P+ + +
Sbjct: 360 GMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVF 419

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            TLI+G    +  DKA  L  +M  +G+ P+ I +N +L   C++G +  ++ I   M+ 
Sbjct: 420 RTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVR 479

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             +  D  TYTTLI+G+     + EA +  + M+  G  P++
Sbjct: 480 VDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNE 521



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 203/412 (49%), Gaps = 15/412 (3%)

Query: 83  RAKEVLDEMLQMGLSPDTATYNTL--LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            A  + DE+L+     DT +   L   + +  +E+ + A  +F  M R     D+ ++S 
Sbjct: 50  HAHHLFDELLRR----DTTSIFDLNSALSAVARESPAVALSLFNRMPR----ADLCTYSI 101

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR-DEMLEK 199
           +IG  SR G LD A      +   G     + ++ ++ G C +    +A+ +    M   
Sbjct: 102 VIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPAL 161

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEML----ERGVFPDFYTFTTLIHGHCKDGN 255
           GC  +  +YN +L GLC      +A  L + M+      G  PD  ++TT+I+G  ++G 
Sbjct: 162 GCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQ 221

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           ++KA  LFD M  + + P+ +TYN L+ G+C  G+ ++A  ++  M    + P+ ++Y  
Sbjct: 222 LDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNT 281

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           L+   C  G   EA +++  MV KG KP      T++ GY   G   +  + L  MV  G
Sbjct: 282 LMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNG 341

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             PD   +N LI  + +   +D+A    SKM  QGL P+++TY  ++   CR G++ D+ 
Sbjct: 342 TQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAM 401

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
               R+I +GL P+   + TLI+G  + +   +A     EM+ RG  P+  F
Sbjct: 402 SQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIF 453



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 224/434 (51%), Gaps = 13/434 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K   +D A +   +M Q+G++P+ VTY T+++A CR G +++A    + +  +G
Sbjct: 352 LIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG 411

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    + +LI+GLC   + D+A+E+  EM+  G+ P+T  +NTLL   C++  ++ A+
Sbjct: 412 LTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAK 471

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  M R  V  D+++++TLI  +  +G++D A      M   G+ P+ V Y  IINGY
Sbjct: 472 NIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGY 531

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG + +A  +  +M  KG    +V Y+TIL+GL + + +  A +L+  M++ G+    
Sbjct: 532 CKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPI 591

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++ G C++   + AL +F  +          T+N +ID   K G  ++A  L+A 
Sbjct: 592 GTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFAS 651

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +++R + PN ++Y +++      G + E   L+  +   G        N ++    + G+
Sbjct: 652 LLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGE 711

Query: 361 ASKADEFLSKMVS-----EGVDPDSI-------SYNTLINGFVRE-ENMDKAFALVSKME 407
             KA  +LSK+       E    +S+        Y+  IN    +     K+ A+ S+ +
Sbjct: 712 VRKAGVYLSKIDENNFSLEASTAESLVFLVSSGKYDQHINSIPEKYRPTAKSRAVFSQKK 771

Query: 408 NQGLVPDVITYNVI 421
           N GL     +Y V+
Sbjct: 772 NPGLFDAAGSYGVV 785


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 257/476 (53%), Gaps = 3/476 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK--GLKPGVFTYN 69
           D   + L  M + GV PDT++YNT++   C +   + A  L+++M  K  G  P V TYN
Sbjct: 172 DVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYN 231

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           ++I+GL ++G   +A  +  EM+Q G+ PD  TY +++   C+   M +AE +  +M   
Sbjct: 232 TVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISN 291

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  P+ V+++ +I  +S +GQ       FREM S GL+P+ V     ++  C++G   EA
Sbjct: 292 GFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEA 351

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            +  D M  KG   ++VTY+ +L+G        +  +LFN M   G+  D   F  +I  
Sbjct: 352 AEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDA 411

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           + K G M++ + +F  M ++ + PD  TY  +I  F ++G +  A   +  MI+  + P 
Sbjct: 412 YGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPE 471

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGI-KPTLVSCNTIIKGYCRSGDASKADEFL 368
            I Y  LI G+C  G++ +A  L  EM+ +GI +P +V  N+II   C+ G   +A +  
Sbjct: 472 GIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIF 531

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             ++  G  PD I++N+LI+G+     ++KAF ++  M + G+ PDV++YN ++ G+CR 
Sbjct: 532 DFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRN 591

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GR+ D  ++   M+ KG+ P   TY  +++G  +      A +   EM++ G   D
Sbjct: 592 GRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 154/473 (32%), Positives = 255/473 (53%), Gaps = 3/473 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK--GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           +V  LC+D +   A   L  M +K  G  P+ VTYNT+I+   REG + +A  L + M  
Sbjct: 196 VVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQ 255

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G+ P V TY S+I+ LCK    D+A+ VL +M+  G  P+  TYN ++          E
Sbjct: 256 QGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKE 315

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
              +F EM+ +G+ P+IV+ ++ +    ++G+   A  +F  M + G  P+ V Y+++++
Sbjct: 316 TAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLH 375

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G  ++ L + + M   G V D   +N +++   +  M+ E   +F +M E+GV P
Sbjct: 376 GYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIP 435

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+  +I    + G +  A++ F+ M    +KP+ + Y++LI GFC  G + KA +L 
Sbjct: 436 DACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELV 495

Query: 299 ADMISRKIS-PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           ++M+SR I  PN + +  +IN  C  G V EA  ++  ++  G +P +++ N++I GY  
Sbjct: 496 SEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGL 555

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   KA   L  M+S G++PD +SYNTLI+G+ R   +D    L  +M ++G+ P  IT
Sbjct: 556 VGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTIT 615

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           Y +IL G    GR   ++ +   MIE G   D ST   ++ G    N   EA 
Sbjct: 616 YGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAI 668



 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 250/484 (51%), Gaps = 36/484 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK   +D A++ L +M   G  P+ VTYN +I+ Y   G  +E   +   M+ +G
Sbjct: 268 IIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQG 327

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL----VESC----- 111
           L P + T NS ++ LCK G+   A E  D M   G  P+  TY+ LL     E C     
Sbjct: 328 LMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDML 387

Query: 112 --------------------------RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                                     ++  M E   IF +M  +GV PD  ++  +I  F
Sbjct: 388 NLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAF 447

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-D 204
           SR G+L  A+  F +M + GL P+ ++Y  +I G+C +G +++A ++  EM+ +G    +
Sbjct: 448 SRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPN 507

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +V +N+I+N LC+   + EA D+F+ ++  G  PD  TF +LI G+   G + KA  + D
Sbjct: 508 IVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLD 567

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M    I+PD+V+YNTLIDG+C+ G ++    L+ +M+S+ + P  I+YGI+++G  + G
Sbjct: 568 AMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDG 627

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               A ++ +EM+  G    + +C  I+ G CR+    +A     K+ +  V  +    N
Sbjct: 628 RTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIIN 687

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           T+I+   +    ++A  L   +   GLVP+  TY V++    ++G + +++ +   M + 
Sbjct: 688 TMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKS 747

Query: 445 GLNP 448
           G  P
Sbjct: 748 GCAP 751



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 209/394 (53%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K   +D   +   +M+++GV PD  TY  +I A+ R G L +A    N M   G
Sbjct: 408 VIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKENMSEA 119
           LKP    Y+SLI G C  G   +AKE++ EM+  G+  P+   +N+++   C++  + EA
Sbjct: 468 LKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEA 527

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +IF  +   G  PD+++F++LI  +   G++++A      M SAG+ PD V Y  +I+G
Sbjct: 528 HDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDG 587

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YCRNG + + L +  EML KG     +TY  IL+GL        A  + +EM+E G   D
Sbjct: 588 YCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T   ++ G C++   ++A+ +F  +   ++K +I   NT+ID   KV + E+A +L+ 
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFD 707

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +YG++I      G V EA  ++  M   G  P+    N II+     G
Sbjct: 708 SISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKG 767

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           +  KA  ++ K+  + +  ++ + + L+  F RE
Sbjct: 768 EIVKAGNYMFKVDGKRISLEASTVSLLMALFSRE 801



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 209/452 (46%), Gaps = 58/452 (12%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCR-------KENMSEAEEIFCEMSR-----RGV 131
           A  + DE+L+  +     + N       R       ++  S A  +F  + R     R  
Sbjct: 56  AHHLFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGPSLAVALFNRICREEARPRVA 115

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC-----RNGFV 186
            P + +++ L+    R  +       F      GL  D ++ +I++   C     R+  V
Sbjct: 116 LPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLK--CLYHAKRSDDV 173

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER--GVFPDFYTFT 244
           +  L  R  M E G   D ++YNT++  LC       A DL + M+++  G  P+  T+ 
Sbjct: 174 VNLLLHR--MPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYN 231

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           T+IHG  ++G ++KA NLF  M Q+ + PD+VTY ++ID  CK   M+KA  +   MIS 
Sbjct: 232 TVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISN 291

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              PN ++Y  +I+GY   G   E   ++ EM  +G+ P +V+CN+ +   C+ G + +A
Sbjct: 292 GFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEA 351

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVRE------------------------------- 393
            EF   M ++G  P+ ++Y+ L++G+  E                               
Sbjct: 352 AEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDA 411

Query: 394 ----ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                 MD+   + ++M+ QG++PD  TY +++  F R GR+ D+     +MI  GL P+
Sbjct: 412 YGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPE 471

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
              Y +LI G     NL +A     EM+ RG 
Sbjct: 472 GIVYHSLIQGFCMHGNLVKAKELVSEMMSRGI 503



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 198/411 (48%), Gaps = 1/411 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           ME  G+  D   +N +I+AY + G ++E   +   M  +G+ P   TY  +I    + GR
Sbjct: 393 MEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGR 452

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA-PDIVSFS 139
              A +  ++M+ MGL P+   Y++L+   C   N+ +A+E+  EM  RG+  P+IV F+
Sbjct: 453 LADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFN 512

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           ++I    + G++  A   F  +   G  PD + +  +I+GY   G + +A  + D M+  
Sbjct: 513 SIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISA 572

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   DVV+YNT+++G CR   + +   LF EML +GV P   T+  ++HG   DG    A
Sbjct: 573 GIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGA 632

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +   M +     DI T   ++ G C+    ++A  ++  + +  +  N      +I+ 
Sbjct: 633 KKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDA 692

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
              +    EA  L+  +   G+ P   +   +IK   + G   +AD   S M   G  P 
Sbjct: 693 MYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPS 752

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           S   N +I   + +  + KA   + K++ + +  +  T ++++  F R+G+
Sbjct: 753 SRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGK 803



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 165/333 (49%), Gaps = 1/333 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   C    +  AK  + EM  +G+  P+ V +N++IN+ C+EG + EA  + + +   
Sbjct: 478 LIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI 537

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P V T+NSLI+G    G+ ++A  VLD M+  G+ PD  +YNTL+   CR   + + 
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDG 597

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM  +GV P  +++  ++     +G+   A     EM  +G   D     II+ G
Sbjct: 598 LILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CRN    EA+ M  ++       ++   NT+++ + + +   EA +LF+ +   G+ P+
Sbjct: 658 LCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPN 717

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +I    K+G++ +A N+F +M +    P     N +I    + GE+ KA     
Sbjct: 718 ASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMF 777

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            +  ++IS    +  +L+  +   G   E  +L
Sbjct: 778 KVDGKRISLEASTVSLLMALFSREGKYWEDVKL 810


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/482 (31%), Positives = 270/482 (56%), Gaps = 8/482 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK+ ++D+A     EM  KG  PD VTY T++++ C+ G +++A +L    +G+ 
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL----AGR- 239

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V  YN+LI+G+CK+GR + A ++L EM+  G+ P+  +Y+ ++   C   N+  A 
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +F +M  RG   +I +F+ LI G F R G+L  AL  ++ M   G  P+ V Y  +I+G
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMR-GKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C NG + EAL++ D+M   GC+ +V TY+ +++G  ++  L  A + +N M+  G  P+
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T ++   CK+   ++A +L + MT +   P+ +T+NT I G C  G +E A KL  
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLE 478

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M      PN  +Y  L++    M    EAF L+ E+  + ++P LV+ NT++ G+ R+G
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN-QGLVPDVITY 418
              +A +   K +  G  PDSI+YNT+I+ + ++  +  A  LV ++ + +   PD+ITY
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITY 598

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++ G C    + ++   L + I +G+ P+ +T+  L+                D++L+
Sbjct: 599 TSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILR 658

Query: 479 RG 480
           +G
Sbjct: 659 KG 660



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 249/487 (51%), Gaps = 6/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL  ++K          M++ G+ P+  TYN L+ A C+   ++ A +L   MS KG
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY ++++ LCK G+ D A+E+          P    YN L+   C++  +  A 
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAI 264

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   GV P++VS+S +I     +G ++ A   F +M   G   +   +T +I G 
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + EAL +   M++ GC  +VV YNT+++GLC    L EA  + ++M   G  P+ 
Sbjct: 325 FMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ LI G  K G++  A   ++ M     +P++VTY  ++D  CK    ++AN L   
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     +PN I++   I G C  G V  A +L   M G G  P + + N ++    R   
Sbjct: 445 MTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     ++ +  + P+ ++YNT++ GF R   M +A  L  K   +G  PD ITYN 
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT 564

Query: 421 ILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++  +C+QG++  +  ++ R+   K  +PD  TYT+LI G  +  N++EA  F D+ + +
Sbjct: 565 MIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQ 624

Query: 480 GFVPDDA 486
           G  P+ A
Sbjct: 625 GICPNFA 631



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 252/484 (52%), Gaps = 5/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L ++ ++D  +  L +M+  G+      +  +IN Y R G  E+A ++   +   G
Sbjct: 80  MIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFG 139

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V  YN L++ L  + +      +   M + GL P+  TYN LL   C+ + +  A 
Sbjct: 140 CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAH 199

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EMS +G  PD V+++T++    + G++D A    RE+ +    P   +Y  +I+G 
Sbjct: 200 KLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----REL-AGRFKPSVPVYNALIDGM 254

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A+K+  EM++ G   +VV+Y+ I+N LC +  +  A  LF +M  RG   + 
Sbjct: 255 CKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANI 314

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TFT LI G    G + +AL+L+ +M Q   +P++V YNTLI G C  G +E+A ++   
Sbjct: 315 HTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQ 374

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y ILI+G+   G +  A   W  M+  G +P +V+   ++   C++  
Sbjct: 375 MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM 434

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A+  + KM  EG  P++I++NT I G      ++ A  L+ +M+  G +P++ TYN 
Sbjct: 435 FDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNE 494

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L    R  +  ++  +   +  + L P+  TY T++ G      + EA +   + L RG
Sbjct: 495 LLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRG 554

Query: 481 FVPD 484
             PD
Sbjct: 555 TAPD 558



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 179/378 (47%), Gaps = 30/378 (7%)

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++  +I    R  ++D      ++MK  G+     L+  IINGY R G   +ALKM   +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
            E GC   V  YN +L+ L         + L+  M + G+ P+ +T+  L+   CK+  +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 257 NKALNLFDIMTQKSIKPDIVTY------------------------------NTLIDGFC 286
           + A  LF  M+ K   PD VTY                              N LIDG C
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMC 255

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G +E A KL  +M+   + PN +SY  +IN  C  G+V  AF L+ +M  +G    + 
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           +   +IKG    G   +A +    M+ +G +P+ ++YNTLI+G     ++++A  +  +M
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           +  G +P+V TY++++ GF + G +  +     RMI  G  P+  TYT +++     +  
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435

Query: 467 KEAFRFHDEMLQRGFVPD 484
            +A    ++M   G  P+
Sbjct: 436 DQANSLVEKMTLEGCTPN 453


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 153/466 (32%), Positives = 252/466 (54%), Gaps = 6/466 (1%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M   G+ PD  T N L+N  C    + E   +M  +  +G  P + TY +LI GLC + 
Sbjct: 121 QMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEH 180

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM----SRRGV--AP 133
           R  +A  +   M ++G +P+  TY TL+   CR  N+S A ++  EM    S  G+   P
Sbjct: 181 RISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKP 240

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
            ++S+S +I    ++ + D A   F EMK  G+ P  + YT +I+G+C  G   EA ++ 
Sbjct: 241 VVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLF 300

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           +EM+ +G   +VVT+N +++ LC+   + EA DL   M++RG+ P+  T+ +LI G C  
Sbjct: 301 NEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLV 360

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G++N A  LF  M  K  +PD++ Y  LI+G+CK  ++E+A KL+  M+     P+  +Y
Sbjct: 361 GDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTY 420

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
           G L+ G    G V +A +L+  M   GI   L      + G C++G   +A E  +K+ S
Sbjct: 421 GALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKS 480

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
             +  D   +N LI+G  +   ++ A+ L  K+  + L PDV+TYN+++  FCR G++  
Sbjct: 481 YNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVK 540

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           + ++  +M + G  PD+ TY TLI G      L++       M+QR
Sbjct: 541 ANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/455 (30%), Positives = 238/455 (52%), Gaps = 6/455 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC  +++      +  + ++G  PD VTY TLI   C E  + +A  L   M   G
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ------MGLSPDTATYNTLLVESCRKE 114
             P   TY +L+ GLC+ G    A ++  EML       +   P   +Y+ ++   C+  
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              EA ++F EM  +G+ P ++S+++LI  F   G+ + A   F EM + G+ P+ V + 
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFN 316

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+  C+ G V+EA  + + M+++G V +++TYN+++ G C    L  A +LF  M  +
Sbjct: 317 VLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 376

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  PD   +T LI+G+CK   + +A+ L++ M Q   +PD+ TY  L+ G  + G++  A
Sbjct: 377 GCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDA 436

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            KL+  M    I  +   YGI +NG C  G + EA  L+ ++    IK  +   N +I G
Sbjct: 437 KKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDG 496

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C++G    A E   K+  E + PD ++YN +I+ F R   + KA  L  KME  G  PD
Sbjct: 497 LCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPD 556

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
            ITY  ++ GF    ++     +L  M+++ ++ D
Sbjct: 557 KITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 221/421 (52%), Gaps = 6/421 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLM------N 54
           ++  LC +H+I  A +    M++ G  P+ +TY TL+   CR G +  A +L       +
Sbjct: 172 LIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS 231

Query: 55  SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
           S+ G   KP V +Y+ +I+ LCK  R D A+++ +EM   G++P   +Y +L+   C   
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGG 291

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              EA+ +F EM  +GV P++V+F+ LI +  + G++  A      M   G+VP+ + Y 
Sbjct: 292 KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 351

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I G+C  G +  A ++   M  KGC  DV+ Y  ++NG C+   + EA  L+N ML+ 
Sbjct: 352 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 411

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  PD  T+  L+ G  + G +  A  LF +M    I  D+  Y   ++G CK G + +A
Sbjct: 412 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 471

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L+  + S  I  +   +  LI+G C  G +  A+ L+ ++  + ++P +V+ N +I  
Sbjct: 472 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 531

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           +CR G   KA+    KM   G  PD I+Y TLI GF   + ++K   L+  M  + +  D
Sbjct: 532 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591

Query: 415 V 415
           V
Sbjct: 592 V 592


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 160/534 (29%), Positives = 268/534 (50%), Gaps = 74/534 (13%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRC 81
           QK   P+ V   T+I AY +    ++A  +   M    G +PG+ +YNSL+N L +  + 
Sbjct: 72  QKCKCPEDVAL-TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKW 130

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D A+        MGLSP+  TYN L+  SCRK+   +A+E+   M  +G +PD+ S+ TL
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I   ++NG +  AL  F EM   G+ PD   Y I+I+G+ + G +L A ++ + +L+   
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250

Query: 202 VM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           V  ++ +YN ++NGLC+     E+ ++++ M +     D YT++TLIHG C  GN++ A 
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK--------------------------- 293
            ++  M +  + PD+V YNT+++G+ + G +E+                           
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLF 370

Query: 294 -------ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE----------- 335
                  A  +W  +  +    + ++YG+L++G C  G++ +A  +  E           
Sbjct: 371 ENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTF 430

Query: 336 ------------------------MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
                                   M   G KP    CN +I G+ R+     A  F   M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           VS+G  P  ++YNTLING  + E   +A+ALV +M ++G  P++ITY++++ G C QG+ 
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC-QGKK 549

Query: 432 HDSELILW-RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D  L LW + +EKG  PD   +  +I+G  S   +++A + + EM QR  VP+
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPN 603



 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 257/485 (52%), Gaps = 2/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  + D AK  L  M ++G  PD  +Y TLIN+  + G++ +A +L + M  +G
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 214

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           + P V  YN LI+G  KKG    A E+ + +L+   + P+  +YN ++   C+     E+
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 274

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            EI+  M +     D+ ++STLI     +G LD A   ++EM   G+ PD V+Y  ++NG
Sbjct: 275 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 334

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y R G + E L++   M ++GC   VV+YN ++ GL     + EA  ++  + E+    D
Sbjct: 335 YLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCAD 393

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+HG CK+G +NKAL++ +         D   Y+++I+G C+ G +++   +  
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M      PN      +ING+     + +A R +  MV KG  PT+V+ NT+I G  ++ 
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S+A   + +M+ +G  P+ I+Y+ L+NG  + + +D A  L  +   +G  PDV  +N
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +I+ G C  G++ D+  +   M ++   P+  T+ TL+ G     + + A +  D +LQ 
Sbjct: 574 IIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQY 633

Query: 480 GFVPD 484
           G  PD
Sbjct: 634 GPQPD 638



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 249/494 (50%), Gaps = 35/494 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++N+L K+  +  A     EM ++GV PD   YN LI+ + ++G +  A ++   +  G 
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P + +YN +INGLCK G+ D + E+   M +     D  TY+TL+   C   N+  A
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 309

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-------------- 165
             ++ EM+  GV+PD+V ++T++  + R G+++  L  ++ M+  G              
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369

Query: 166 --------------LVP------DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                         L+P      D++ Y ++++G C+NG++ +AL + +E       +D 
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y++++NGLCR   L E   + ++M + G  P+ +    +I+G  +   +  AL  F  
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K   P +VTYNTLI+G  K     +A  L  +M+ +   PN I+Y +L+NG C    
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  LW + + KG KP +   N II G C SG    A +  S+M      P+ +++NT
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+ GF +  + ++A  +   +   G  PD+I+YN+ L G C   R+ D+   L   +++G
Sbjct: 610 LMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 669

Query: 446 LNPDRSTYTTLING 459
           + P   T+  L+  
Sbjct: 670 VLPTAITWNILVRA 683



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 221/446 (49%), Gaps = 36/446 (8%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           ++   VYP+  +YN +IN  C+ G  +E+F++ + M        ++TY++LI+GLC  G 
Sbjct: 246 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A  V  EM + G+SPD   YNT+L    R   + E  E++  M + G    +VS++ 
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 364

Query: 141 LI-GIFS----------------------------------RNGQLDRALMYFREMKSAG 165
           LI G+F                                   +NG L++AL    E ++  
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
              D   Y+ +ING CR G + E   + D+M + GC  +    N ++NG  RA  L +A 
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
             F  M+ +G FP   T+ TLI+G  K    ++A  L   M  K  KP+++TY+ L++G 
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C+  +++ A  LW   + +   P+   + I+I+G CS G V +A +L+ EM  +   P L
Sbjct: 545 CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNL 604

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ NT+++G+ +  D  +A +    ++  G  PD ISYN  + G      +  A   ++ 
Sbjct: 605 VTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLND 664

Query: 406 MENQGLVPDVITYNVILTGFCRQGRM 431
             ++G++P  IT+N+++      G +
Sbjct: 665 AVDRGVLPTAITWNILVRAVLDNGAL 690



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 166/327 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L ++ K+D A      + +K    D++TY  L++  C+ G+L +A  ++       
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                F Y+S+INGLC++GR D    VLD+M + G  P+    N ++    R   + +A 
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M  +G  P +V+++TLI   S+  +   A    +EM   G  P+ + Y++++NG 
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  AL +  + LEKG   DV  +N I++GLC +  + +A  L++EM +R   P+ 
Sbjct: 545 CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNL 604

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T  TL+ G  K  +  +A  ++D + Q   +PDI++YN  + G C    +  A     D
Sbjct: 605 VTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLND 664

Query: 301 MISRKISPNYISYGILINGYCSMGHVT 327
            + R + P  I++ IL+      G +T
Sbjct: 665 AVDRGVLPTAITWNILVRAVLDNGALT 691



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 1/138 (0%)

Query: 350 TIIKGYCRSGDASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           T+IK Y ++    +A +   +M    G  P   SYN+L+N  +     D+A +     E 
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            GL P++ TYN+++   CR+ +   ++ +L  M E+G +PD  +Y TLIN       + +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 469 AFRFHDEMLQRGFVPDDA 486
           A +  DEM +RG  PD A
Sbjct: 203 ALKLFDEMPERGVTPDVA 220


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 157/494 (31%), Positives = 261/494 (52%), Gaps = 13/494 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++ CK   +D AK F C + + G+ P   ++N LIN  C  G + EA +L + M+  G
Sbjct: 247 IMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 306

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TYN L+ G    G    A EV+ +ML  GLSPD  TY  LL   C+  N+    
Sbjct: 307 VEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 366

Query: 121 EIFCEMSRRGVA-PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M  RG     I+ +S ++    + G++D AL  F ++++ GL PD V Y+I+I+G
Sbjct: 367 ILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHG 426

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G    A+++ DEM  K  + +  T   I+ GLC+  ML EA  L + ++  G   D
Sbjct: 427 LCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLD 486

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I G+ K G + +AL LF +  +  I P++ T+N+LI G+CK   + +A K+  
Sbjct: 487 IILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILD 546

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    + P+ +SY  L++ Y + G +     L  EM  +GI PT V+ + I KG CR  
Sbjct: 547 VIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGW 606

Query: 360 D------------ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
                          K +  L  M SEG+ PD I+YNT+I    R +++ +AF L  KM+
Sbjct: 607 KLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMK 666

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           +Q L P   TYN+++   C  G +  ++  L+ + ++ ++  +  YTT+I  H  + + +
Sbjct: 667 SQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPE 726

Query: 468 EAFRFHDEMLQRGF 481
            A    +++L RGF
Sbjct: 727 MAVILFNQLLDRGF 740



 Score =  244 bits (622), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 249/468 (53%), Gaps = 13/468 (2%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           TY+T+++  CR+  LE+A   + +   K + P V ++NS+++  CK G  D AK     +
Sbjct: 208 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTV 267

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           L+ GL P   ++N L+   C   +++EA E+  +M++ GV PD V+++ L+  F   G +
Sbjct: 268 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMI 327

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVTYNT 210
             A    ++M   GL PD + YTI++ G C+ G +   L +  +ML +G  +  ++ Y+ 
Sbjct: 328 SGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSV 387

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +L+GLC+   + EA  LF ++   G+ PD   ++ +IHG CK G  + A+ ++D M  K 
Sbjct: 388 MLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKR 447

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I P+  T   ++ G C+ G + +A  L   +IS   + + I Y I+I+GY   G + EA 
Sbjct: 448 ILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEAL 507

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L+   +  GI P + + N++I GYC++ + ++A + L  +   G+ P  +SY TL++ +
Sbjct: 508 ELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAY 567

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW-RMIEK----- 444
               ++     L  +M+ +G+ P  +TY+VI  G CR  ++ +   +L  R++EK     
Sbjct: 568 ANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVL 627

Query: 445 ------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
                 G+ PD+ TY T+I       +L  AF    +M  +   P  A
Sbjct: 628 RDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSA 675



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 237/458 (51%), Gaps = 10/458 (2%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR-CDRAKEVLD 89
           + ++ L+    R   ++E+  ++  M  + L     +YNS++    +  +  D  KE+ D
Sbjct: 144 LVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKD 203

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +        +  TY+T++   CR++ + +A         + + P +VSF++++  + + G
Sbjct: 204 K--------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLG 255

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +D A  +F  +   GLVP    + I+ING C  G + EAL++  +M + G   D VTYN
Sbjct: 256 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 315

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            ++ G     M++ A ++  +ML++G+ PD  T+T L+ G C+ GN++  L L   M  +
Sbjct: 316 ILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSR 375

Query: 270 SIK-PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             +   I+ Y+ ++ G CK G +++A  L+ D+ +  ++P+ ++Y I+I+G C +G    
Sbjct: 376 GFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDM 435

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A R++ EM  K I P   +   I+ G C+ G   +A   L  ++S G   D I YN +I+
Sbjct: 436 AVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVID 495

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ +   +++A  L       G+ P+V T+N ++ G+C+   + ++  IL  +   GL P
Sbjct: 496 GYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVP 555

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              +YTTL++ + +  ++K       EM   G  P + 
Sbjct: 556 SVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNV 593



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 221/458 (48%), Gaps = 23/458 (5%)

Query: 6   CKDHKIDSAKMFLCEMEQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           C+   ID   + L +M  +G      + Y+ +++  C+ G ++EA  L   +   GL P 
Sbjct: 357 CQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPD 416

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           +  Y+ +I+GLCK G+ D A  V DEM    + P++ T   +++  C+K  + EA  +  
Sbjct: 417 LVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLD 476

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            +   G   DI+ ++ +I  ++++G ++ AL  F+    +G+ P+   +  +I GYC+  
Sbjct: 477 SLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQ 536

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA K+ D +   G V  VV+Y T+++       +   ++L  EM   G+ P   T++
Sbjct: 537 NIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYS 596

Query: 245 TLIHGHCKDG---NMNKAL---------NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
            +  G C+     N N+ L         ++   M  + I PD +TYNT+I   C+V  + 
Sbjct: 597 VIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLS 656

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           +A +L+  M S+ + P   +Y ILI+  C  G + +A R  Y +  + +  +  +  T+I
Sbjct: 657 RAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVI 716

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
           K +C  GD   A    ++++  G +     Y+ +IN   R     ++      M ++G+ 
Sbjct: 717 KAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGIS 776

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
           PD+    V++            EL+ W  I+ GL PD+
Sbjct: 777 PDLDICEVMIKS---------DELLSW-TIKWGLLPDQ 804



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 206/426 (48%), Gaps = 22/426 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  ++D A     ++E  G+ PD V Y+ +I+  C+ G  + A ++ + M  K 
Sbjct: 388 MLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKR 447

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T  +++ GLC+KG    A+ +LD ++  G + D   YN ++    +   + EA 
Sbjct: 448 ILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEAL 507

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F      G+ P++ +F++LI  + +   +  A      +K  GLVP  V YT +++ Y
Sbjct: 508 ELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAY 567

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA------------KMLTEADDLF 228
              G +    ++R EM  +G     VTY+ I  GLCR             ++L + + + 
Sbjct: 568 ANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVL 627

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M   G+ PD  T+ T+I   C+  ++++A  LF  M  +++ P   TYN LID  C  
Sbjct: 628 RDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIY 687

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G + KA++    +  R +S +  +Y  +I  +C  G    A  L+ +++ +G   ++   
Sbjct: 688 GCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDY 747

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           + +I   CR   A ++  F   M+S G+ PD              E M K+  L+S    
Sbjct: 748 SAVINRLCRRHLAIESKYFFCLMLSRGISPD----------LDICEVMIKSDELLSWTIK 797

Query: 409 QGLVPD 414
            GL+PD
Sbjct: 798 WGLLPD 803


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 160/534 (29%), Positives = 268/534 (50%), Gaps = 74/534 (13%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRC 81
           QK   P+ V   T+I AY +    ++A  +   M    G +PG+ +YNSL+N L +  + 
Sbjct: 72  QKCKCPEDVAL-TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKW 130

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D A+        MGLSP+  TYN L+  SCRK+   +A+E+   M  +G +PD+ S+ TL
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I   ++NG +  AL  F EM   G+ PD   Y I+I+G+ + G +L A ++ + +L+   
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250

Query: 202 VM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           V  ++ +YN ++NGLC+     E+ ++++ M +     D YT++TLIHG C  GN++ A 
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK--------------------------- 293
            ++  M +  + PD+V YNT+++G+ + G +E+                           
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLF 370

Query: 294 -------ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE----------- 335
                  A  +W  +  +    + ++YG+L++G C  G++ +A  +  E           
Sbjct: 371 ENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTF 430

Query: 336 ------------------------MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
                                   M   G KP    CN +I G+ R+     A  F   M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           VS+G  P  ++YNTLING  + E   +A+ALV +M ++G  P++ITY++++ G C QG+ 
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC-QGKK 549

Query: 432 HDSELILW-RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D  L LW + +EKG  PD   +  +I+G  S   +++A + + EM QR  VP+
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPN 603



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 254/479 (53%), Gaps = 2/479 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  + D AK  L  M ++G  PD  +Y TLIN+  + G++ +A +L + M  +G
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 214

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           + P V  YN LI+G  KKG    A E+ + +L+   + P+  +YN ++   C+     E+
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 274

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            EI+  M +     D+ ++STLI     +G LD A   ++EM   G+ PD V+Y  ++NG
Sbjct: 275 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 334

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y R G + E L++   M ++GC   VV+YN ++ GL     + EA  ++  + E+    D
Sbjct: 335 YLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCAD 393

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+HG CK+G +NKAL++ +         D   Y+++I+G C+ G +++   +  
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M      PN      +ING+     + +A R +  MV KG  PT+V+ NT+I G  ++ 
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S+A   + +M+ +G  P+ I+Y+ L+NG  + + +D A  L  +   +G  PDV  +N
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           +I+ G C  G++ D+  +   M ++   P+  T+ TL+ G     + + A +  D +LQ
Sbjct: 574 IIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 172/343 (50%), Gaps = 34/343 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC    +D A     EM + GV PD V YNT++N Y R G +EE  +L   M  +G
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 61  LKP---------GVF-------------------------TYNSLINGLCKKGRCDRAKE 86
            +          G+F                         TY  L++GLCK G  ++A  
Sbjct: 356 CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           +L+E        DT  Y++++   CR+  + E   +  +M++ G  P+    + +I  F 
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           R  +L+ AL +F  M S G  P  V Y  +ING  +     EA  +  EML KG   +++
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TY+ ++NGLC+ K L  A +L+ + LE+G  PD      +IHG C  G +  AL L+  M
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            Q+   P++VT+NTL++GF KV + E+A+K+W  ++    S N
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 1/138 (0%)

Query: 350 TIIKGYCRSGDASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           T+IK Y ++    +A +   +M    G  P   SYN+L+N  +     D+A +     E 
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            GL P++ TYN+++   CR+ +   ++ +L  M E+G +PD  +Y TLIN       + +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 469 AFRFHDEMLQRGFVPDDA 486
           A +  DEM +RG  PD A
Sbjct: 203 ALKLFDEMPERGVTPDVA 220


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 251/487 (51%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  K + +  FL  +  KG  PD +    LI  +     +E+A ++M  +    
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P VF YN++I+G CK  + + A +VL+ M   G  PD  TYN ++   C +  +  A 
Sbjct: 144 -EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  ++      P +++++ LI      G ++ A+    EM + GL+PD   Y  II G 
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  A ++   +  KGC  DV++YN +L          E + L  EM  RG  P+ 
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ LI   C+ G +++A+++  +M +K + PD  +Y+ LI   CK G ++ A  +   
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS    P+ ++Y  ++   C  G+  +A  ++ ++ G G  P + S NT+I      GD
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 442

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A   +  M+S+G+DPD I+YN+LI+   R+  +++A  L+  ME  G  P VI+YN+
Sbjct: 443 RSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 502

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C+  R+ D+  +   MIEKG  P+ +TY  LI G        EA    + +  R 
Sbjct: 503 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRD 562

Query: 481 FVPDDAF 487
            +  D+F
Sbjct: 563 VISQDSF 569


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 148/457 (32%), Positives = 246/457 (53%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    +  ++ +  +    + A  L   M   G+   + T+N LIN   + G    +  V
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              +L+ G  P+  T  TL+   C K  + +A     ++   G   + V + TLI    +
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            GQ   AL   R +    + P+ V+Y  II+  C+   V EA  +  EM+ KG   DVVT
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+ +++G C    L +A  LFN+M+   + PD YTF+ L+ G CK+G + +A N+  +M 
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ IKPD+VTY +L+DG+C V ++ KA  ++  M    ++ N  SY I+ING+C +  V 
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+ EM  K I P +V+ N++I G C+SG  S A + + +M   GV  D I+YN+++
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +   +DKA AL++KM+++G+ PD+ TY +++ G C+ GR+ D++ I   ++ KG N
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
               TYT +I G    +   +A     +M   G +P+
Sbjct: 474 ITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPN 510



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 239/424 (56%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +KG  P+ +T  TLI   C +G + +A    + +   G       Y +LINGLCK G+  
Sbjct: 119 KKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTS 178

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A ++L  +    + P+   YNT++   C+ + ++EA +++ EM  +G++PD+V++S LI
Sbjct: 179 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALI 238

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F   G+L+ A+  F +M S  + PD   ++I+++G+C+ G V EA  +   M+++G  
Sbjct: 239 SGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIK 298

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DVVTY ++++G C  K + +A  +FN M + GV  +  ++  +I+G CK   +++A+NL
Sbjct: 299 PDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNL 358

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  M  K+I PD+VTYN+LIDG CK G++  A KL  +M  R +  + I+Y  +++  C 
Sbjct: 359 FKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCK 418

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
              V +A  L  +M  +GI+P + +   +I G C+ G    A      ++ +G +    +
Sbjct: 419 NHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYT 478

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y  +I GF   +  DKA AL+SKME+ G +P+  TY +I+     +     +E +L  MI
Sbjct: 479 YTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMI 538

Query: 443 EKGL 446
            +GL
Sbjct: 539 ARGL 542



 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 251/463 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EME  G+  D VT+N LIN + + G    +F +  ++  KG +P   T  +LI GLC KG
Sbjct: 81  EMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKG 140

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A    D+++ +G   +   Y TL+   C+    S A ++   +  + V P++V ++
Sbjct: 141 QIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYN 200

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    +   ++ A   + EM S G+ PD V Y+ +I+G+C  G + +A+ + ++M+ +
Sbjct: 201 TIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISE 260

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               DV T++ +++G C+   + EA ++   M+++G+ PD  T+ +L+ G+C    +NKA
Sbjct: 261 EINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKA 320

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            ++F+ M Q  +  ++ +YN +I+GFCK+ ++++A  L+ +M  + I P+ ++Y  LI+G
Sbjct: 321 KSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDG 380

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G ++ A +L  EM  +G+    ++ N+I+   C++    KA   L+KM  EG+ PD
Sbjct: 381 LCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +Y  LI+G  +   +  A  +   +  +G    V TY V++ GFC       +  +L 
Sbjct: 441 MYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLS 500

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +M + G  P+  TY  +I     ++    A +   EM+ RG +
Sbjct: 501 KMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 222/412 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +I  A  F  ++   G + + V Y TLIN  C+ G    A QL+  + GK 
Sbjct: 132 LIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKL 191

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V  YN++I+ +CK    + A ++  EM+  G+SPD  TY+ L+   C    +++A 
Sbjct: 192 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAI 251

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M    + PD+ +FS L+  F + G++  A      M   G+ PD V Y  +++GY
Sbjct: 252 GLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGY 311

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V +A  + + M + G   +V +YN ++NG C+ K + EA +LF EM  + + PD 
Sbjct: 312 CLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDV 371

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G CK G ++ AL L D M  + +  D +TYN+++D  CK  +++KA  L   
Sbjct: 372 VTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 431

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I P+  +Y ILI+G C  G + +A  ++ +++ KG   T+ +   +I+G+C +  
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDL 491

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
             KA   LSKM   G  P++ +Y  +I     ++  D A  L+ +M  +GL+
Sbjct: 492 FDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 212/397 (53%)

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            + +L +  +P    +  +L    +      A  +  EM   G+A D+V+F+ LI  FS+
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    +   F  +   G  P+ +  T +I G C  G + +AL   D+++  G  ++ V 
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T++NGLC+    + A  L   +  + V P+   + T+I   CK   +N+A +L+  M 
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K I PD+VTY+ LI GFC +G++  A  L+  MIS +I+P+  ++ IL++G+C  G V 
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +   M+ +GIKP +V+  +++ GYC     +KA    + M   GV  +  SYN +I
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           NGF + + +D+A  L  +M  + ++PDV+TYN ++ G C+ G++  +  ++  M ++G+ 
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D+ TY ++++     + + +A     +M   G  PD
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 156/477 (32%), Positives = 256/477 (53%), Gaps = 4/477 (0%)

Query: 12  DSAKMFLCEMEQK--GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           DSA + L  +  K     P+   Y  ++    R G  ++  +++  M     + G  T+ 
Sbjct: 63  DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFL 122

Query: 70  SLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
            LI    +    D    V+D M+ + GL PDT  YN +L       ++   E    +MS 
Sbjct: 123 ILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSV 182

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G+ PD+ +F+ LI    R  QL  A++   +M S GLVPD   +T ++ GY   G +  
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER-GVFPDFYTFTTLI 247
           AL++R++M+E GC    V+ N I++G C+   + +A +   EM  + G FPD YTF TL+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +G CK G++  A+ + D+M Q+   PD+ TYN++I G CK+GE+++A ++   MI+R  S
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN ++Y  LI+  C    V EA  L   +  KGI P + + N++I+G C + +   A E 
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M S+G +PD  +YN LI+    +  +D+A  ++ +ME  G    VITYN ++ GFC+
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +  ++E I   M   G++ +  TY TLI+G      +++A +  D+M+  G  PD
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 251/487 (51%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N L   + +   ++   +M   G+ PD  T+N LI A CR   L  A  ++  M   G
Sbjct: 160 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   T+ +++ G  ++G  D A  + ++M++ G S    + N ++   C++  + +A 
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279

Query: 121 EIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
               EMS + G  PD  +F+TL+    + G +  A+     M   G  PD   Y  +I+G
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G V EA+++ D+M+ + C  + VTYNT+++ LC+   + EA +L   +  +G+ PD
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF +LI G C   N   A+ LF+ M  K  +PD  TYN LID  C  G++++A  +  
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M     + + I+Y  LI+G+C      EA  ++ EM   G+    V+ NT+I G C+S 
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A + + +M+ EG  PD  +YN+L+  F R  ++ KA  +V  M + G  PD++TY 
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +++G C+ GR+  +  +L  +  KG+N     Y  +I G   +    EA     EML++
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639

Query: 480 GFVPDDA 486
              P DA
Sbjct: 640 NEAPPDA 646



 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 262/487 (53%), Gaps = 3/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+ H++  A + L +M   G+ PD  T+ T++  Y  EG L+ A ++   M   G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSEA 119
                 + N +++G CK+GR + A   + EM  Q G  PD  T+NTL+   C+  ++  A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            EI   M + G  PD+ +++++I    + G++  A+    +M +    P+ V Y  +I+ 
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+   V EA ++   +  KG + DV T+N+++ GLC  +    A +LF EM  +G  PD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+  LI   C  G +++ALN+   M        ++TYNTLIDGFCK  +  +A +++ 
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    +S N ++Y  LI+G C    V +A +L  +M+ +G KP   + N+++  +CR G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D  KA + +  M S G +PD ++Y TLI+G  +   ++ A  L+  ++ +G+      YN
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN 614

Query: 420 VILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNN-LKEAFRFHDEML 477
            ++ G  R+ +  ++  +   M+E+    PD  +Y  +  G  +    ++EA  F  E+L
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELL 674

Query: 478 QRGFVPD 484
           ++GFVP+
Sbjct: 675 EKGFVPE 681



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 142/274 (51%), Gaps = 6/274 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC   K+D A   L +ME  G     +TYNTLI+ +C+     EA ++ + M   G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TYN+LI+GLCK  R + A +++D+M+  G  PD  TYN+LL   CR  ++ +A 
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR--EMKSAGLVPDNVLYTIIIN 178
           +I   M+  G  PDIV++ TLI    + G+++ A    R  +MK   L P    Y  +I 
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQ 618

Query: 179 GYCRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGV 236
           G  R     EA+ +  EMLE+     D V+Y  +  GLC     + EA D   E+LE+G 
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
            P+F +   L  G          + L +++ QK+
Sbjct: 679 VPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 2/241 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK +K   A+    EME  GV  ++VTYNTLI+  C+   +E+A QLM+ M  +G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP  +TYNSL+   C+ G   +A +++  M   G  PD  TY TL+   C+   +  A 
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
           ++   +  +G+     +++ +I    R  +   A+  FREM +     PD V Y I+  G
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655

Query: 180 YCR-NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            C   G + EA+    E+LEKG V +  +   +  GL    M      L N ++++  F 
Sbjct: 656 LCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFS 715

Query: 239 D 239
           +
Sbjct: 716 E 716


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 152/393 (38%), Positives = 234/393 (59%), Gaps = 11/393 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK+ K+  AK FL  ME  G+ P  VTYNTL+  +   G +E A  +++ M  KG
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TYN +++ +C +GR   A EVL EM ++GL PD+ +YN +L+  C   N  + E
Sbjct: 291 FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYN-ILIRGC--SNNGDLE 344

Query: 121 EIFC---EMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             F    EM ++G+ P   +++TLI G+F  N +++ A +  RE++  G+V D+V Y I+
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN-KIEAAEILIREIREKGIVLDSVTYNIL 403

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           INGYC++G   +A  + DEM+  G      TY +++  LCR     EAD+LF +++ +G+
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD     TL+ GHC  GNM++A +L   M   SI PD VTYN L+ G C  G+ E+A +
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L  +M  R I P++ISY  LI+GY   G    AF +  EM+  G  PTL++ N ++KG  
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
           ++ +   A+E L +M SEG+ P+  S+ ++I  
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/459 (32%), Positives = 246/459 (53%), Gaps = 3/459 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+   +D A      M++KG YP T T N ++    R   +E A+     M    
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+T+N +IN LCK+G+  +AK  L  M   G+ P   TYNTL+     +  +  A 
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM  +G  PD+ +++ ++      G   RA    REMK  GLVPD+V Y I+I G 
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGC 337

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             NG +  A   RDEM+++G V    TYNT+++GL     +  A+ L  E+ E+G+  D 
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G+C+ G+  KA  L D M    I+P   TY +LI   C+  +  +A++L+  
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + + P+ +    L++G+C++G++  AF L  EM    I P  V+ N +++G C  G 
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E + +M   G+ PD ISYNTLI+G+ ++ +   AF +  +M + G  P ++TYN 
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           +L G  +      +E +L  M  +G+ P+ S++ ++I  
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 239/457 (52%), Gaps = 3/457 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           T+ ++ L+   C+   ++EA +    M  KG  P   T N ++  L +  R + A     
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +M +M +  +  T+N ++   C++  + +A+     M   G+ P IV+++TL+  FS  G
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           +++ A +   EMKS G  PD   Y  I++  C  G   E L+   EM E G V D V+YN
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYN 331

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            ++ G      L  A    +EM+++G+ P FYT+ TLIHG   +  +  A  L   + +K
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            I  D VTYN LI+G+C+ G+ +KA  L  +M++  I P   +Y  LI   C      EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L+ ++VGKG+KP LV  NT++ G+C  G+  +A   L +M    ++PD ++YN L+ G
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
              E   ++A  L+ +M+ +G+ PD I+YN +++G+ ++G    + ++   M+  G NP 
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPT 571

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             TY  L+ G       + A     EM   G VP+D+
Sbjct: 572 LLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDS 608



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 127/250 (50%), Gaps = 35/250 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L  ++KI++A++ + E+ +KG+  D+VTYN LIN YC+ G  ++AF L + M   G
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDG 427

Query: 61  LKPGVFTYNSLINGLCKK------------------------------GRC-----DRAK 85
           ++P  FTY SLI  LC+K                              G C     DRA 
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L EM  M ++PD  TYN L+   C +    EA E+  EM RRG+ PD +S++TLI  +
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S+ G    A M   EM S G  P  + Y  ++ G  +N     A ++  EM  +G V + 
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607

Query: 206 VTYNTILNGL 215
            ++ +++  +
Sbjct: 608 SSFCSVIEAM 617



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 4/150 (2%)

Query: 1   MVNALCKDH----KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM 56
           M+N L   H     +D A   L EM+   + PD VTYN L+   C EG  EEA +LM  M
Sbjct: 469 MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
             +G+KP   +YN+LI+G  KKG    A  V DEML +G +P   TYN LL    + +  
Sbjct: 529 KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEG 588

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
             AEE+  EM   G+ P+  SF ++I   S
Sbjct: 589 ELAEELLREMKSEGIVPNDSSFCSVIEAMS 618


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 157/477 (32%), Positives = 254/477 (53%), Gaps = 4/477 (0%)

Query: 12  DSAKMFLCEMEQK--GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           DSA + L  +  K     P+   Y  ++    R G  ++  +++  M   G + G   + 
Sbjct: 63  DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFL 122

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
            LI    +    D    V+  M+   GL PDT  YN +L       N+   E    +MS 
Sbjct: 123 ILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSV 182

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G+ PD+ +F+ LI    R  QL  A++   +M S GLVPD   +T I+ GY   G +  
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDG 242

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER-GVFPDFYTFTTLI 247
           AL++R++M+E GC    V+ N I++G C+   + +A +   EM  + G FPD YTF TL+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +G CK G++  A+ + D+M Q+   PD+ TYN++I G CK+GE+++A +    MI+R  S
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCS 362

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN ++Y  LI+  C    V EA  L   +  KGI P + + N++I+G C + +   A E 
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M S+G +PD  +YN LI+    +  +D+A  ++ +ME  G    VITYN ++ GFC+
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++ ++E I   M   G++ +  TY TLI+G      +++A +  D+M+  G  PD
Sbjct: 483 ANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPD 539



 Score =  272 bits (695), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 264/487 (54%), Gaps = 3/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+ H++  A + L +M   G+ PD  T+ T++  Y  EG L+ A ++   M   G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFG 254

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSEA 119
                 + N +++G CK+GR + A   + EM  Q G  PD  T+NTL+   C+  ++  A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            EI   M + G  PD+ +++++I    + G++  A+ +  +M +    P+ V Y  +I+ 
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIST 374

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+   V EA ++   +  KG + DV T+N+++ GLC  +    A +LF EM  +G  PD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+  LI   C  G +++ALN+   M        ++TYNTLIDGFCK  ++ +A +++ 
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFD 494

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    +S N ++Y  LI+G C    V +A +L  +M+ +G KP   + N+++  +CR G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGG 554

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D  KA + +  M S G +PD ++Y TLI+G  +   ++ A  L+  ++ +G+      YN
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYN 614

Query: 420 VILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNN-LKEAFRFHDEML 477
            ++ G  R+ +  ++  +   M+E+    PD  +Y  +  G  +    ++EA  F  E+L
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELL 674

Query: 478 QRGFVPD 484
           ++GFVP+
Sbjct: 675 EKGFVPE 681



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 249/487 (51%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N L   + +   ++   +M   G+ PD  T+N LI A CR   L  A  ++  M   G
Sbjct: 160 MLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   T+ +++ G  ++G  D A  + ++M++ G S    + N ++   C++  + +A 
Sbjct: 220 LVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279

Query: 121 EIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
               EMS + G  PD  +F+TL+    + G +  A+     M   G  PD   Y  +I+G
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G V EA++  D+M+ + C  + VTYNT+++ LC+   + EA +L   +  +G+ PD
Sbjct: 340 LCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF +LI G C   N   A+ LF+ M  K  +PD  TYN LID  C  G++++A  +  
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M     + + I+Y  LI+G+C    + EA  ++ EM   G+    V+ NT+I G C+S 
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A + + +M+ EG  PD  +YN+L+  F R  ++ KA  +V  M + G  PD++TY 
Sbjct: 520 RVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +++G C+ GR+  +  +L  +  KG+      Y  +I G   +    EA     EML++
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639

Query: 480 GFVPDDA 486
                DA
Sbjct: 640 NEAAPDA 646



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 142/431 (32%), Positives = 229/431 (53%), Gaps = 42/431 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEME-QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V+  CK+ +++ A  F+ EM  Q G +PD  T+NTL+N  C+ G ++ A ++M+ M  +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P V+TYNS+I+GLCK G    A E LD+M+    SP+T TYNTL+   C++  + EA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIG--IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            E+   ++ +G+ PD+ +F++LI     +RN ++  A+  F EM+S G  PD   Y ++I
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTYNMLI 442

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDV-------------------------------- 205
           +  C  G + EAL M  +M   GC   V                                
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVS 502

Query: 206 ---VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
              VTYNT+++GLC+++ + +A  L ++M+  G  PD +T+ +L+   C+ G++ KA ++
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADI 562

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
              MT    +PDIVTY TLI G CK G +E A+KL   +  + I+    +Y  +I G   
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFR 622

Query: 323 MGHVTEAFRLWYEMVGKG-IKPTLVSCNTIIKGYCRSGDA-SKADEFLSKMVSEGVDPDS 380
               TEA  L+ EM+ +    P  VS   + +G C  G    +A +FL +++ +G  P+ 
Sbjct: 623 KRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEF 682

Query: 381 ISYNTLINGFV 391
            S   L  G +
Sbjct: 683 SSLYMLAEGLL 693



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 142/272 (52%), Gaps = 2/272 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC   K+D A   L +ME  G     +TYNTLI+ +C+   + EA ++ + M   G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TYN+LI+GLCK  R + A +++D+M+  G  PD  TYN+LL   CR  ++ +A 
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAA 560

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M+  G  PDIV++ TLI    + G+++ A    R ++  G+      Y  +I G 
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGL 620

Query: 181 CRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGVFP 238
            R     EA+ +  EMLE+     D V+Y  +  GLC     + EA D   E+LE+G  P
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +F +   L  G          + L +++ QK+
Sbjct: 681 EFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 1/130 (0%)

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM-ENQGLVPDV 415
           RSG      + L  M + G +  +  +  LI  + + E  D+   +V  M ++ GL PD 
Sbjct: 95  RSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDT 154

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
             YN +L        +   E+   +M   G+ PD ST+  LI      + L+ A    ++
Sbjct: 155 HFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLED 214

Query: 476 MLQRGFVPDD 485
           M   G VPD+
Sbjct: 215 MPSYGLVPDE 224


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 155/481 (32%), Positives = 262/481 (54%), Gaps = 3/481 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           ++  I  A+ F   M +  +  D  ++N +I++YC+ G + EAF + ++M   G  P + 
Sbjct: 506 REGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDIC 565

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TY SL+ GLC+ G   +AKE +  +L+   + D  T NTLLV  C+   + EA ++  +M
Sbjct: 566 TYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKM 625

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
             R + PD  +++ L+  F + G++  AL+  + M   GLVPD + YT ++NG    G V
Sbjct: 626 VTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQV 685

Query: 187 LEALKMRDEML-EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
             A  M  E++ ++G   D + YN+++NG  +   + E + L   M E  V+P   ++  
Sbjct: 686 KAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNI 745

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L+HG+ K G +++ L L+  M ++ IKPD VTY  LI G C+ G +E A K    M+  +
Sbjct: 746 LMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEE 805

Query: 306 --ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             + P +  Y  LIN  C +G +  AF L  +M   G+ P+ V+ ++I++G C+ G   +
Sbjct: 806 SGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 865

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A    S ++  G+ P   ++ TL++G  +E  +D AF L   ME+ GL  DV+TYNV++T
Sbjct: 866 AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLIT 925

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G C +  + D+  +   M  KGL P+ +TY TL     +   +++  +   ++  RG VP
Sbjct: 926 GLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 985

Query: 484 D 484
            
Sbjct: 986 S 986



 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 156/505 (30%), Positives = 266/505 (52%), Gaps = 22/505 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NAL   +K +   +FL E   +    D  T N ++N+ C +G L +A  ++  M    
Sbjct: 201 ILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCR 260

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TYN+++N   KKGRC  A  +LD+M + G+  D  TYN ++ + C+ +  + A 
Sbjct: 261 L-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAY 319

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M    + PD  S++TLI  F   G+++ A+  F +M    L P    YT +I+GY
Sbjct: 320 LLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGY 379

Query: 181 CRNGFVLEALKMRDE--------------------MLEKGCVMDVVTYNTILNGLCRAKM 220
           CRNG   EA ++  E                    ML  G   DV+TY+ ++NG+C+  M
Sbjct: 380 CRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGM 439

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           + E  ++ + M + GV P+   +TTL+   CK G+  +AL  F  + +  +  + V +N 
Sbjct: 440 IHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNA 499

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           L+  F + G + +A +    M   KIS +  S+  +I+ YC  G+V EAF ++  MV  G
Sbjct: 500 LLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHG 559

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
             P + +  ++++G C+ G   +A EF+  ++ +    D  + NTL+ G  +   +D+A 
Sbjct: 560 WPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEAL 619

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L  KM  + ++PD  TY ++L GFC++G++  + ++L  M+EKGL PD   YT L+NG 
Sbjct: 620 DLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGL 679

Query: 461 VSQNNLKEA-FRFHDEMLQRGFVPD 484
           V++  +K A + F + + + G   D
Sbjct: 680 VNEGQVKAASYMFQEIICKEGLYAD 704



 Score =  270 bits (691), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 153/508 (30%), Positives = 258/508 (50%), Gaps = 23/508 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAF---------- 50
           +++    + KI+ A     +M ++ + P   TY  LI+ YCR G  +EA           
Sbjct: 340 LIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITG 399

Query: 51  ----------QLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDT 100
                     Q++  M   G+ P V TY++LING+CK G     KE+L  M + G+ P+ 
Sbjct: 400 VRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNN 459

Query: 101 ATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE 160
             Y TL+   C+  +  EA + F ++ R G+  + V  + L+  F R G +  A  + + 
Sbjct: 460 VLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQY 519

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM 220
           M    +  D   +  II+ YC+ G VLEA  + D M+  G   D+ TY ++L GLC+   
Sbjct: 520 MSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGH 579

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           L +A +    +LE+    D  T  TL+ G CK G +++AL+L + M  ++I PD  TY  
Sbjct: 580 LVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTI 639

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK- 339
           L+DGFCK G++  A  L   M+ + + P+ I+Y  L+NG  + G V  A  ++ E++ K 
Sbjct: 640 LLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 699

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           G+    ++ N+++ GY + G  ++ +  +  M    V P S SYN L++G++++  + + 
Sbjct: 700 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 759

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI--EKGLNPDRSTYTTLI 457
             L   M  +G+ PD +TY +++ G C  G +  +   L +M+  E GL P  + Y  LI
Sbjct: 760 LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALI 819

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           N      ++  AF   ++M   G VP +
Sbjct: 820 NAKCRVGDIDGAFELKEDMKALGVVPSE 847



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 253/487 (51%), Gaps = 3/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   CK      A  +  ++ + G+  ++V +N L+ ++ REG + EA Q    MS   
Sbjct: 465 LVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMK 524

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V ++N +I+  C++G    A  V D M++ G  PD  TY +LL   C+  ++ +A+
Sbjct: 525 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 584

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E    +  +  A D  + +TL+    ++G LD AL    +M +  ++PD   YTI+++G+
Sbjct: 585 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGF 644

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-ERGVFPD 239
           C+ G ++ AL +   MLEKG V D + Y  +LNGL     +  A  +F E++ + G++ D
Sbjct: 645 CKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 704

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              + ++++G+ K G +N+   L   M +  + P   +YN L+ G+ K G++ +   L+ 
Sbjct: 705 CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 764

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV--GKGIKPTLVSCNTIIKGYCR 357
           DM+   I P+ ++Y +LI G C  G +  A +   +MV    G++P       +I   CR
Sbjct: 765 DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCR 824

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            GD   A E    M + GV P  ++ ++++ G  +   +++A  + S +   G+VP + T
Sbjct: 825 VGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIAT 884

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           +  ++ G C++ ++ D+  +   M   GL  D  TY  LI G  ++  + +A   ++EM 
Sbjct: 885 FTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMK 944

Query: 478 QRGFVPD 484
            +G +P+
Sbjct: 945 SKGLLPN 951



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 223/508 (43%), Gaps = 91/508 (17%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           + + L+NAY +EG + +A   +  M   G K  +F+ N+++N L    + +     L E 
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKES 221

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           L      D  T N +L   C +  +S+AE +                             
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESML---------------------------- 253

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
                  ++MK+  L P+ V Y  I+N Y + G    AL++ D+M + G   D+ TYN +
Sbjct: 254 -------QKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIM 305

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++ LC+ K    A  L   M E  + PD  ++ TLIHG   +G +N A+ +F+ M ++S+
Sbjct: 306 IDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSL 365

Query: 272 KPDIVTYNTLIDGFCKVG--------------------EMEKANKLWADMISRKISPNYI 311
           KP + TY  LIDG+C+ G                    E+ KA ++   M++  I P+ I
Sbjct: 366 KPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVI 425

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  LING C MG + E   +   M   G+ P  V   T++  +C++G A +A ++   +
Sbjct: 426 TYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDI 485

Query: 372 VSEGVDPDSISYNTLINGFVRE-----------------------------------ENM 396
              G+  +S+ +N L+  F RE                                    N+
Sbjct: 486 YRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNV 545

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            +AF++   M   G  PD+ TY  +L G C+ G +  ++  +  ++EK    D  T  TL
Sbjct: 546 LEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 605

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G      L EA    ++M+ R  +PD
Sbjct: 606 LVGICKHGTLDEALDLCEKMVTRNILPD 633



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 184/347 (53%), Gaps = 3/347 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEA-FQLMNSMSGK 59
           +++  CK  KI  A + L  M +KG+ PDT+ Y  L+N    EG ++ A +     +  +
Sbjct: 640 LLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 699

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL      YNS++NG  K G+ +  + ++  M +  + P +A+YN L+    +K  +S  
Sbjct: 700 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 759

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYTIII 177
             ++ +M + G+ PD V++  LI      G ++ A+ +  +M  + +GL P +  Y  +I
Sbjct: 760 LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALI 819

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           N  CR G +  A +++++M   G V   V  ++I+ GLC+   + EA  +F+ ++  G+ 
Sbjct: 820 NAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMV 879

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P   TFTTL+HG CK+  ++ A +L  +M    +K D+VTYN LI G C    +  A  L
Sbjct: 880 PTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDL 939

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           + +M S+ + PN  +Y  L     + G + +  +L  ++  +GI P+
Sbjct: 940 YEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 986



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 159/314 (50%), Gaps = 5/314 (1%)

Query: 1   MVNALCKDHKIDSAK-MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++N L  + ++ +A  MF   + ++G+Y D + YN+++N Y + G + E  +LM +M   
Sbjct: 675 LLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHEN 734

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P   +YN L++G  KKG+  R   +  +M++ G+ PD  TY  L+   C +  + E 
Sbjct: 735 EVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLC-EYGLIEI 793

Query: 120 EEIFCE---MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
              F E   +   G+ P    +  LI    R G +D A     +MK+ G+VP  V  + I
Sbjct: 794 AVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSI 853

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           + G C+ G V EA+ +   ++  G V  + T+ T+++GLC+   + +A  L   M   G+
Sbjct: 854 VRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGL 913

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
             D  T+  LI G C    +  AL+L++ M  K + P+I TY TL       G M+   K
Sbjct: 914 KVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEK 973

Query: 297 LWADMISRKISPNY 310
           L  D+  R I P+Y
Sbjct: 974 LLKDIEDRGIVPSY 987



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 36/220 (16%)

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG------- 354
           ISR    N  S  +L+N Y   G V +A    + M   G K +L SCN I+         
Sbjct: 152 ISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKS 211

Query: 355 ----------------------------YCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
                                        C  G  SKA+  L KM +  + P++++YNT+
Sbjct: 212 EYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTI 270

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           +N +V++     A  ++  ME  G+  D+ TYN+++   C+  R   + L+L RM E  L
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            PD  +Y TLI+G   +  +  A    ++ML++   P  A
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVA 370


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 263/468 (56%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           F  +ME  G+  +  T N +IN +CR      A+ ++  +   G +P   T+N+LINGLC
Sbjct: 87  FCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLC 146

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
            + +   A  ++  M++ G  P+  TYN+++   C+  + S A ++  +M  R V  D+ 
Sbjct: 147 LESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVF 206

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++ST+I    R+G +D A+  F+EM++ G+    V Y  ++ G C+ G   + +++  +M
Sbjct: 207 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDM 266

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             +  + +V+T+N +++   +   L EA++L+ EM+ +G+ P+  T+ +L+ G+C    +
Sbjct: 267 TSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRL 326

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A N+ D+M + +  PDIVT+ +LI G+CKV  +++  KL+  +  R +  N ++Y IL
Sbjct: 327 SEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSIL 386

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + G+C  G +  A  L+ EMV  G+ P +++   ++ G C +G   KA E    +    +
Sbjct: 387 VQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 446

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
           + D + Y  +I G  +   ++ A+ L   +  +G+ P+V+TY V+++G C++G + ++ +
Sbjct: 447 NLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 506

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +L +M E G  P+  TY TLI  H+   +L  + +  +EM   GF  D
Sbjct: 507 LLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 554



 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 241/422 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + K+  A + +  M + G  P+ VTYN+++N  C+ G    A  L+  M  + 
Sbjct: 141 LINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN 200

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  VFTY+++I+ LC+ G  D A  +  EM   G+     TYN+L+   C+    ++  
Sbjct: 201 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGV 260

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M+ R + P++++F+ LI +F + G+L  A   ++EM + G+ P+ + Y  +++GY
Sbjct: 261 QLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGY 320

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA  M D M+   C  D+VT+ +++ G C+ K + E   LF ++ +RG+  + 
Sbjct: 321 CMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANT 380

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ L+ G C+ G +  A  LF  M    + PD++TY  L+DG C  G++EKA +++ D
Sbjct: 381 VTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFED 440

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   K++ + + Y I+I G C  G V +A+ L+  +  KG+KP +++   +I G C+ G 
Sbjct: 441 LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A+  L KM  +G +P+  +YNTLI   +R+ ++  +  L+ +M++ G   D  +  +
Sbjct: 501 LSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 560

Query: 421 IL 422
           ++
Sbjct: 561 VI 562



 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 259/458 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  C+  K   A   L ++ + G  PDT T+NTLIN  C E  + EA  L+  M   G
Sbjct: 106 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENG 165

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYNS++NG+CK G    A ++L +M +  +  D  TY+T++   CR   +  A 
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+   +V++++L+G   + G+ +  +   ++M S  ++P+ + + ++I+ +
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA ++  EM+ KG   + +TYN++++G C    L+EA+++ + M+     PD 
Sbjct: 286 VKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDI 345

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFT+LI G+CK   +++ + LF  ++++ +  + VTY+ L+ GFC+ G++E A +L+ +
Sbjct: 346 VTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQE 405

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++YGIL++G C  G + +A  ++ ++    +   +V    II+G C+ G 
Sbjct: 406 MVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGK 465

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      +  +GV P+ ++Y  +I+G  ++ ++ +A  L+ KME  G  P+  TYN 
Sbjct: 466 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNT 525

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++    R G +  S  ++  M   G + D S+   +I+
Sbjct: 526 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 563



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 246/478 (51%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D K D A     EM +    P  V ++   +                 M   G+   ++T
Sbjct: 43  DIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT 102

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
            N +IN  C+  +   A  VL +++++G  PDT T+NTL+   C +  +SEA  +   M 
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G  P++V++++++    ++G    AL   R+M    +  D   Y+ II+  CR+G + 
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A+ +  EM  KG    +VTYN+++ GLC+A    +   L  +M  R + P+  TF  LI
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
               K+G + +A  L+  M  K I P+ +TYN+L+DG+C    + +AN +   M+    S
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ +++  LI GYC +  V E  +L+ ++  +G+    V+ + +++G+C+SG    A+E 
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +MVS GV PD ++Y  L++G      ++KA  +   ++   +  D++ Y +I+ G C+
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCK 462

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            G++ D+  +   +  KG+ P+  TYT +I+G   + +L EA     +M + G  P+D
Sbjct: 463 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPND 520



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 116/218 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  ++D       ++ ++G+  +TVTY+ L+  +C+ G LE A +L   M   G
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY  L++GLC  G+ ++A E+ +++ +  ++ D   Y  ++   C+   + +A 
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAW 470

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +FC +  +GV P++++++ +I    + G L  A +  R+M+  G  P++  Y  +I  +
Sbjct: 471 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAH 530

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
            R+G +  + K+ +EM   G   D  +   +++ L  A
Sbjct: 531 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 154/482 (31%), Positives = 270/482 (56%), Gaps = 8/482 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK+ ++D+A     EM  KG  PD VTY T++++ C+ G +++A +L    +G+ 
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL----AGR- 239

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V  YN+LI+G+CK+GR + A ++L EM+  G+ P+  +Y+ ++   C   N+  A 
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +F +M  RG   +I +F+ LI G F R G+L  AL  ++ M   G  P+ V Y  +I+G
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMR-GKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C NG + EAL++ D+M   GC+ +V TY+ +++G  ++  L  A + +N M+  G  P+
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T ++   CK+   ++A +L + MT +   P+ +T+NT I G C  G +E A KL  
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLE 478

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M      PN  +Y  L++    M    EAF L+ E+  + ++P LV+ NT++ G+ R+G
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN-QGLVPDVITY 418
              +A +   K +  G  PDSI+YNT+I+ + ++  +  A  LV ++ + +   PD+ITY
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITY 598

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++ G C    + ++   L + I +G+ P+ +T+  L+                D++L+
Sbjct: 599 TSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILR 658

Query: 479 RG 480
           +G
Sbjct: 659 KG 660



 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 249/487 (51%), Gaps = 6/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL  ++K          M++ G+ P+  TYN L+ A C+   ++ A +L   MS KG
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY ++++ LCK G+ D A+E+          P    YN L+   C++  +  A 
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAI 264

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   GV P++VS+S +I     +G ++ A   F +M   G   +   +T +I G 
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + EAL +   M++ GC  +VV YNT+++GLC    L EA  + ++M   G  P+ 
Sbjct: 325 FMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ LI G  K G++  A   ++ M     +P++VTY  ++D  CK    ++AN L   
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     +PN +++   I G C  G V  A +L   M G G  P + + N ++    R   
Sbjct: 445 MTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     ++ +  + P+ ++YNT++ GF R   M +A  L  K   +G  PD ITYN 
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT 564

Query: 421 ILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++  +C+QG++  +  ++ R+   K  +PD  TYT+LI G  +  N++EA  F D+ + +
Sbjct: 565 MIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQ 624

Query: 480 GFVPDDA 486
           G  P+ A
Sbjct: 625 GICPNFA 631



 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 252/484 (52%), Gaps = 5/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L ++ ++D  +  L +M+  G+      +  +IN Y R G  E+A ++   +   G
Sbjct: 80  MIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFG 139

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V  YN L++ L  + +      +   M + GL P+  TYN LL   C+ + +  A 
Sbjct: 140 CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAH 199

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EMS +G  PD V+++T++    + G++D A    RE+ +    P   +Y  +I+G 
Sbjct: 200 KLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----REL-AGRFKPSVPVYNALIDGM 254

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A+K+  EM++ G   +VV+Y+ I+N LC +  +  A  LF +M  RG   + 
Sbjct: 255 CKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANI 314

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TFT LI G    G + +AL+L+ +M Q   +P++V YNTLI G C  G +E+A ++   
Sbjct: 315 HTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQ 374

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y ILI+G+   G +  A   W  M+  G +P +V+   ++   C++  
Sbjct: 375 MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM 434

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A+  + KM  EG  P+++++NT I G      ++ A  L+ +M+  G +P++ TYN 
Sbjct: 435 FDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNE 494

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L    R  +  ++  +   +  + L P+  TY T++ G      + EA +   + L RG
Sbjct: 495 LLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRG 554

Query: 481 FVPD 484
             PD
Sbjct: 555 TAPD 558



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 179/378 (47%), Gaps = 30/378 (7%)

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++  +I    R  ++D      ++MK  G+     L+  IINGY R G   +ALKM   +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
            E GC   V  YN +L+ L         + L+  M + G+ P+ +T+  L+   CK+  +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 257 NKALNLFDIMTQKSIKPDIVTY------------------------------NTLIDGFC 286
           + A  LF  M+ K   PD VTY                              N LIDG C
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMC 255

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G +E A KL  +M+   + PN +SY  +IN  C  G+V  AF L+ +M  +G    + 
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           +   +IKG    G   +A +    M+ +G +P+ ++YNTLI+G     ++++A  +  +M
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           +  G +P+V TY++++ GF + G +  +     RMI  G  P+  TYT +++     +  
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435

Query: 467 KEAFRFHDEMLQRGFVPD 484
            +A    ++M   G  P+
Sbjct: 436 DQANSLVEKMTLEGCTPN 453


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 164/490 (33%), Positives = 248/490 (50%), Gaps = 9/490 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           ++NA CK   +  A+  L  M + G+ PDT TYN L+   CR G L  A  L   M  + 
Sbjct: 96  LINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRW 155

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G     ++Y  LI GLC  GR D A  V  +M +    P   TY  LL   C+   + EA
Sbjct: 156 GACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEA 215

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E +  EM  +GV P++V+++ LIG   + G+ D       +M+     PD   YT +++G
Sbjct: 216 EALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHG 275

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C++G V    K+  E + KG  ++V+TYN ++NG C+   +  A D+   M    V P 
Sbjct: 276 LCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPG 335

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF  +IHG C  G ++KA+     M    + P+ VT+N+LI G C VGE + A +L  
Sbjct: 336 VQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLD 395

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M    + P+  +Y I I+  C  G + EA  L+  +  KGIK   V   +++ GYC+ G
Sbjct: 396 LMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVG 455

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D   A   + KM SE   PD  +YNTLI+G  + + +D+A  L+ KM+ QG+ P   T+N
Sbjct: 456 DIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFN 515

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN-----GHVSQNNLKEAFRFHD 474
           +++       +  D+  +  +MI  G  PD+ TYT  I+     G   + N+  A     
Sbjct: 516 ILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV--- 572

Query: 475 EMLQRGFVPD 484
           EM + G  PD
Sbjct: 573 EMHEAGVFPD 582



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 246/488 (50%), Gaps = 24/488 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  A+  L EM  KGV P+ VTYN LI   C+EG  ++  +L+  M  + 
Sbjct: 202 LLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQR 261

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +TY  +++GLCK G+     +VL E +  G++ +  TYN L+   C+  +M  A 
Sbjct: 262 HSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAAL 321

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M R  V P + +F+ +I  F   G++ +A+ +  +M  AGL P+ V +  +I+G 
Sbjct: 322 DVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQ 381

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G    AL++ D M E G + D  TY   ++ LC    L EA  LF+ +  +G+    
Sbjct: 382 CSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHN 441

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+L+HG+C+ G+++ A  L + M  ++  PD+ TYNTLIDG CKV  +++A  L   
Sbjct: 442 VIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDK 501

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP-----TLVSCNTIIKGY 355
           M  + I P   ++ ILI          +A +++ +M+  G KP     TL       +G 
Sbjct: 502 MKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGA 561

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            +       D  + +M   GV PD  +YN +I  +V     +KAF    KM +  + PD 
Sbjct: 562 TKE---ENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDC 618

Query: 416 ITYNVILTGFCRQ--GRMHDSELILWRMI-------------EKGLNPDRSTYTTLINGH 460
            TY+++L   C +      D+E I W+M+             E    P  STY  L+ G 
Sbjct: 619 TTYSILLNYMCNKDDSDAFDNEKI-WKMVDVRNLQELFEQMCESDAAPGISTYKALLRGL 677

Query: 461 VSQNNLKE 468
            +Q  L+E
Sbjct: 678 CNQCRLEE 685



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 239/496 (48%), Gaps = 40/496 (8%)

Query: 29  DTVTYNTLINAYCREGF----LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           D  ++N  + AY   G     L        +M   G  P   TYN+LIN  CK      A
Sbjct: 50  DVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADA 109

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR-GVAPDIVSFSTLIG 143
           +  L  M + GL+PDT TYN L++  CR   ++ A  +F +M RR G   D  S++ LI 
Sbjct: 110 RAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIK 169

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
                G++D A   F +M      P    YT++++G C+   V EA  +  EM+ KG V 
Sbjct: 170 GLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +VVTYN ++ GLC+     +   L  +M  +   PD +T+T ++HG CK G +     + 
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVL 289

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                K +  +++TYN LI+G+CK G+M+ A  +   M   +++P   ++  +I+G+C  
Sbjct: 290 HEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCG 349

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD---- 379
           G V +A     +M G G+ P  V+ N++I G C  G+   A   L  M   GV PD    
Sbjct: 350 GKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTY 409

Query: 380 -------------------------------SISYNTLINGFVREENMDKAFALVSKMEN 408
                                          ++ Y +L++G+ +  ++D AF L+ KM +
Sbjct: 410 AIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMAS 469

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +  +PDV TYN ++ G C+  R+  +  +L +M ++G+ P   T+  LI   +      +
Sbjct: 470 ENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHAD 529

Query: 469 AFRFHDEMLQRGFVPD 484
           A + +++M+  G  PD
Sbjct: 530 AAKMYEQMISSGCKPD 545



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 221/509 (43%), Gaps = 51/509 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK  K+      L E   KGV  + +TYN LIN YC+ G ++ A  ++  M    
Sbjct: 272 VVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNR 331

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + PGV T+N +I+G C  G+  +A   L +M   GLSP+T T+N+L+   C       A 
Sbjct: 332 VNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIAL 391

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   GV PD  +++  I      GQL+ A   F  +   G+   NV+YT +++GY
Sbjct: 392 RLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGY 451

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A  + ++M  + C+ DV TYNT+++GLC+ K L  A DL ++M ++G+ P  
Sbjct: 452 CQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTT 511

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD-------------------------- 274
            TF  LI     D     A  +++ M     KPD                          
Sbjct: 512 CTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAV 571

Query: 275 -----------IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS- 322
                      + TYN +I  +   G  EKA      M+S  I P+  +Y IL+N  C+ 
Sbjct: 572 VEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNK 631

Query: 323 -------------MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
                        M  V     L+ +M      P + +   +++G C      + +  L 
Sbjct: 632 DDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLL 691

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           KM    +  D    + L+  +   E   +A      M +Q   P + +  ++L+G C  G
Sbjct: 692 KMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSG 751

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLIN 458
               +  I   M+  G N D   +  LI+
Sbjct: 752 DHGMAVSIFSDMLGLGYNYDEVVWKLLID 780



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 189/419 (45%), Gaps = 23/419 (5%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ALC + +++ A      +  KG+    V Y +L++ YC+ G ++ AF LM  M+ +  
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P V TYN+LI+GLCK  R DRA ++LD+M + G+ P T T+N L+ +    +  ++A +
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAK 532

Query: 122 IFCEMSRRGVAPDIVSFSTLIGI--FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++ +M   G  PD  +++  I    F    + +   M   EM  AG+ PD   Y  II  
Sbjct: 533 MYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKA 592

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y   G   +A     +ML      D  TY+ +LN +C      ++D   NE + + V   
Sbjct: 593 YVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKD---DSDAFDNEKIWKMV--- 646

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
                          ++     LF+ M +    P I TY  L+ G C    +E+   L  
Sbjct: 647 ---------------DVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLL 691

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M    I  +      L+  YC++    EA   +  M  +  +P L SC  ++ G C SG
Sbjct: 692 KMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSG 751

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           D   A    S M+  G + D + +  LI+    + +      ++S M+ +  V    TY
Sbjct: 752 DHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTY 810



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 96/255 (37%), Gaps = 52/255 (20%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAF---------------- 50
           K+  ID   M + EM + GV+PD  TYN +I AY   G  E+AF                
Sbjct: 563 KEENID---MAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCT 619

Query: 51  ---------------------------------QLMNSMSGKGLKPGVFTYNSLINGLCK 77
                                            +L   M      PG+ TY +L+ GLC 
Sbjct: 620 TYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCN 679

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           + R +  + +L +M    +  D    + LL   C  E   EA E F  M+ +   P + S
Sbjct: 680 QCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKS 739

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
              L+     +G    A+  F +M   G   D V++ ++I+     G     L+M   M 
Sbjct: 740 CCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMD 799

Query: 198 EKGCVMDVVTYNTIL 212
            K CV    TY +++
Sbjct: 800 AKKCVASTRTYASLV 814



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/146 (19%), Positives = 64/146 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +++  +  L +M+   +  D    + L+  YC      EA +   SM+ + 
Sbjct: 673 LLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQS 732

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +PG+ +   L++GLC  G    A  +  +ML +G + D   +  L+     K +     
Sbjct: 733 FQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACL 792

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFS 146
           E+   M  +       ++++L+ + +
Sbjct: 793 EMLSVMDAKKCVASTRTYASLVRLVA 818


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 280/520 (53%), Gaps = 37/520 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+LC   K+  A+  L +M+   + P+ VTYNT++N Y ++G  + A ++++ M   G
Sbjct: 236 VLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNG 294

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  ++TYN +I+ LCK  R  RA  +L  M ++ L+PD  +YNTL+     +  ++ A 
Sbjct: 295 IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAI 354

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP------------ 168
            IF +M R+ + P + +++ LI  + RNG+ D A     EM+  G+ P            
Sbjct: 355 YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGY 414

Query: 169 -----------------------DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                                  +  +YTI+I+G+C+ G V +A ++   ML  G   DV
Sbjct: 415 CKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDV 474

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TY+ ++NG+C+  M+ E  ++ + M + GV P+   +TTL+   CK G+  +AL  F  
Sbjct: 475 ITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD 534

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           + +  +  + V +N L+  F + G + +A +    M   KIS +  S+  +I+ YC  G+
Sbjct: 535 IYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGN 594

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V EAF ++  MV  G  P + +  ++++G C+ G   +A EF+  ++ +    D  + NT
Sbjct: 595 VLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNT 654

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+ G  +   +D+A  L  KM  + ++PD  TY ++L GFC++G++  + ++L  M+EKG
Sbjct: 655 LLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKG 714

Query: 446 LNPDRSTYTTLINGHVSQNNLKEA-FRFHDEMLQRGFVPD 484
           L PD   YT L+NG V++  +K A + F + + + G   D
Sbjct: 715 LVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 754



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 261/486 (53%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C++ + D A+  L EM+  GV P  +TY+ L+N YC+   L  A  L+  +  + 
Sbjct: 375 LIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRS 434

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +      Y  LI+G C+ G   +AK++L  ML  G+ PD  TY+ L+   C+   + E +
Sbjct: 435 ISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETK 494

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI   M + GV P+ V ++TL+  F + G    AL YF ++  +GLV ++V++  ++  +
Sbjct: 495 EILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSF 554

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G + EA + +  M       DV ++N I++  C+   + EA  +++ M+  G  PD 
Sbjct: 555 YREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDI 614

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+ G C+ G++ +A      + +K+   D  T NTL+ G CK G +++A  L   
Sbjct: 615 CTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEK 674

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++R I P+  +Y IL++G+C  G V  A  L   M+ KG+ P  ++   ++ G    G 
Sbjct: 675 MVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 734

Query: 361 ASKADEFLSKMV-SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A     +++  EG+  D I+YN+++NG+++   +++   L+  M    + P   +YN
Sbjct: 735 VKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYN 794

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++ G+ ++G++  +  +   M+++G+ PD  TY  LI G      ++ A +F ++M+  
Sbjct: 795 ILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLE 854

Query: 480 GFVPDD 485
           G  PD+
Sbjct: 855 GVFPDN 860



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/495 (30%), Positives = 263/495 (53%), Gaps = 17/495 (3%)

Query: 7    KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
            ++  I  A+ F   M +  +  D  ++N +I++YC+ G + EAF + ++M   G  P + 
Sbjct: 556  REGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDIC 615

Query: 67   TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            TY SL+ GLC+ G   +AKE +  +L+   + D  T NTLLV  C+   + EA ++  +M
Sbjct: 616  TYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKM 675

Query: 127  SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              R + PD  +++ L+  F + G++  AL+  + M   GLVPD + YT ++NG    G V
Sbjct: 676  VTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQV 735

Query: 187  LEALKMRDEML-EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
              A  M  E++ ++G   D + YN+++NG  +   + E + L   M E  V+P   ++  
Sbjct: 736  KAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNI 795

Query: 246  LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
            L+HG+ K G +++ L L+  M ++ IKPD VTY  LI G C+ G +E A K    M+   
Sbjct: 796  LMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEG 855

Query: 306  ISPNYISYGILINGYCS----------------MGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            + P+ +++ ILI  +                  +G +  AF L  +M   G+ P+ V+ +
Sbjct: 856  VFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAES 915

Query: 350  TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I++G C+ G   +A    S ++  G+ P   ++ TL++G  +E  +D AF L   ME+ 
Sbjct: 916  SIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC 975

Query: 410  GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            GL  DV+TYNV++TG C +  + D+  +   M  KGL P+ +TY TL     +   +++ 
Sbjct: 976  GLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDG 1035

Query: 470  FRFHDEMLQRGFVPD 484
             +   ++  RG VP 
Sbjct: 1036 EKLLKDIEDRGIVPS 1050



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 242/519 (46%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VNA  K+ K+  A   +  M++ G      + N ++NA       E  +  +     + 
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V T N ++N LC +G+  +A+ +L +M    L P+  TYNT+L    +K     A 
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSAL 284

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M + G+  D+ +++ +I    +  +  RA +  + M+   L PD   Y  +I+G+
Sbjct: 285 RILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGF 344

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G +  A+ + ++ML +     V TY  +++G CR     EA  +  EM   GV P  
Sbjct: 345 FGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSE 404

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ L++G+CK   +  AL+L   +  +SI  +   Y  LIDGFC++GE+ KA ++   
Sbjct: 405 LTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKC 464

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++  I P+ I+Y  LING C MG + E   +   M   G+ P  V   T++  +C++G 
Sbjct: 465 MLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGH 524

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVRE--------------------------- 393
           A +A ++   +   G+  +S+ +N L+  F RE                           
Sbjct: 525 AKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNC 584

Query: 394 --------ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
                    N+ +AF++   M   G  PD+ TY  +L G C+ G +  ++  +  ++EK 
Sbjct: 585 IIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKA 644

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              D  T  TL+ G      L EA    ++M+ R  +PD
Sbjct: 645 CAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPD 683



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 186/397 (46%), Gaps = 54/397 (13%)

Query: 1    MVNALCKDHKIDSAKMFLCE-MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
            ++  +CK   +D A + LCE M  + + PDT TY  L++ +C+ G +  A  L+  M  K
Sbjct: 655  LLVGICKHGTLDEA-LDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEK 713

Query: 60   GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSE 118
            GL P    Y  L+NGL  +G+   A  +  E++ + GL  D   YN+++    +   ++E
Sbjct: 714  GLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 773

Query: 119  AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
             E +   M    V P   S++ L+  + + GQL R L  +R+M   G+ PDNV Y ++I 
Sbjct: 774  IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIF 833

Query: 179  GYCRNGF-----------VLE--------------------------------------- 188
            G C  G            VLE                                       
Sbjct: 834  GLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDID 893

Query: 189  -ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
             A +++++M   G V   V  ++I+ GLC+   + EA  +F+ ++  G+ P   TFTTL+
Sbjct: 894  GAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLM 953

Query: 248  HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            HG CK+  ++ A +L  +M    +K D+VTYN LI G C    +  A  L+ +M S+ + 
Sbjct: 954  HGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLL 1013

Query: 308  PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            PN  +Y  L     + G + +  +L  ++  +GI P+
Sbjct: 1014 PNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 204/453 (45%), Gaps = 62/453 (13%)

Query: 77  KKGRCDRAK-----EVLDEMLQM-GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           K G+ D+A       +LD ++Q  GL   T  Y   +    + +  S+A  +   ++  G
Sbjct: 79  KSGKLDKAHGKLALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTG 138

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT-IIINGYCRNGFVLEA 189
            +   + FS+L+   SR                    P N+    +++N Y + G VL+A
Sbjct: 139 FSCSAI-FSSLLRTISRCD------------------PTNLFSVDLLVNAYVKEGKVLDA 179

Query: 190 LK-----------------------------------MRDEMLEKGCVMDVVTYNTILNG 214
                                                   E L++   +DV T N +LN 
Sbjct: 180 AAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNS 239

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           LC    L++A+ +  +M +    P+  T+ T+++ + K G    AL + D M +  I+ D
Sbjct: 240 LCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEAD 298

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
           + TYN +ID  CK+    +A  L   M    ++P+  SY  LI+G+   G +  A  ++ 
Sbjct: 299 LYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFN 358

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           +M+ + +KP++ +   +I GYCR+G   +A   L +M   GV P  ++Y+ L+NG+ +  
Sbjct: 359 QMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHS 418

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            +  A  L+  + ++ +  +   Y +++ GFC+ G +  ++ IL  M+  G++PD  TY+
Sbjct: 419 KLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYS 478

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            LING      + E       M + G +P++  
Sbjct: 479 ALINGMCKMGMIHETKEILSRMQKSGVLPNNVL 511



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 163/327 (49%), Gaps = 17/327 (5%)

Query: 1    MVNALCKDHKIDSAK-MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
            ++N L  + ++ +A  MF   + ++G+Y D + YN+++N Y + G + E  +LM +M   
Sbjct: 725  LLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHEN 784

Query: 60   GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             + P   +YN L++G  KKG+  R   +  +M++ G+ PD  TY  L+   C    +  A
Sbjct: 785  EVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIA 844

Query: 120  EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF----------------REMKS 163
             +   +M   GV PD ++F  LI  FS   ++  AL  F                 +MK+
Sbjct: 845  VKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKA 904

Query: 164  AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
             G+VP  V  + I+ G C+ G V EA+ +   ++  G V  + T+ T+++GLC+   + +
Sbjct: 905  LGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDD 964

Query: 224  ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
            A  L   M   G+  D  T+  LI G C    +  AL+L++ M  K + P+I TY TL  
Sbjct: 965  AFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTG 1024

Query: 284  GFCKVGEMEKANKLWADMISRKISPNY 310
                 G M+   KL  D+  R I P+Y
Sbjct: 1025 AMYATGTMQDGEKLLKDIEDRGIVPSY 1051


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 270/503 (53%), Gaps = 20/503 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+   +  A+  +  +   GV  D +  NTLI+ YC    + +A +L+ +     
Sbjct: 203 LVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSD 262

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-------------------GLSPDTA 101
           +K  + TYN+L+   CK G   RA+ + +E+L                      L P   
Sbjct: 263 VKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLV 322

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           TY TL+   C+   + E+  ++ +M   G+ PD+V+ S+++  F R+G+L  A + FREM
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
              GL P++V Y  IIN   ++G V+EA  ++ +M+ +G   D+VT  T+++GL +    
Sbjct: 383 YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKT 442

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
            EA+++F  +L+  + P+  T++ L+ G+CK G M  A  +   M ++ + P+++T++++
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSI 502

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           I+G+ K G + KA  +  +M+ R + PN I Y ILI+GY   G    A     EM  + +
Sbjct: 503 INGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRL 562

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
           + + V  + ++    R G   +A   +  M S+G+DPD ++Y +LI+G+ +E N   A +
Sbjct: 563 EESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 622

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +V +M+ + +  DV+ YN ++ G  R G+ +D   +  RMIE GL PD  TY T+IN + 
Sbjct: 623 IVQEMKEKNIRFDVVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDCITYNTIINTYC 681

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
            +   ++A    +EM   G +P+
Sbjct: 682 IKGKTEDALDILNEMKSYGIMPN 704



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 257/504 (50%), Gaps = 38/504 (7%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
             C+  K+  A +   EM + G+ P+ V+Y T+IN+  + G + EAF L + M  +G+  
Sbjct: 365 GFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF 424

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + T  ++++GL K G+   A+EV + +L++ L+P+  TY+ LL   C+   M  AE + 
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M +  V P++++FS++I  +++ G L +A+   REM    ++P+ ++Y I+I+GY + 
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G    A     EM  +      V ++ +LN L R   + EA  L  +M  +G+ PD   +
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 604

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +LI G+ K+GN   AL++   M +K+I+ D+V YN LI G  ++G+ +    + + MI 
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIE 663

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             ++P+ I+Y  +IN YC  G   +A  +  EM   GI P  V+ N +I G C++G    
Sbjct: 664 LGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFV-- 721

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK-----------------M 406
                         P  I++  L+  + R E  DK   +  K                 M
Sbjct: 722 --------------PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEM 767

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI----NGHVS 462
             +G+  D++TYN ++ G+C    +  +     +M   G+ P+ +TY TL+    N  + 
Sbjct: 768 VKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLM 827

Query: 463 QNNLKEAFRFHDEMLQRGFVPDDA 486
           +  ++E  +   EM +RG VP+ A
Sbjct: 828 EEMMEETEKLVSEMNERGLVPNAA 851



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 158/497 (31%), Positives = 253/497 (50%), Gaps = 51/497 (10%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ VTY+ L++ YC+ G +E A  ++  M  + + P V T++S+ING  KKG   +A +V
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC-EMSRRGVAPDIVSFSTLIGIFS 146
           L EM+Q  + P+T  Y  +L++   K    +  + FC EM  R +    V F  L+    
Sbjct: 519 LREMVQRNVMPNTIVY-AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLK 577

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           R G++D A     +M S G+ PD V Y  +I+GY + G  L AL +  EM EK    DVV
Sbjct: 578 RVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVV 637

Query: 207 TYNTILNGLCRAKMLTEADDLF--NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            YN ++ GL R   L + D  +  + M+E G+ PD  T+ T+I+ +C  G    AL++ +
Sbjct: 638 AYNALIKGLLR---LGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILN 694

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVG----------------EMEKANKLWA--------- 299
            M    I P+ VTYN LI G CK G                  EKA+K+           
Sbjct: 695 EMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASG 754

Query: 300 -----------DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
                      +M+ R IS + ++Y  LI GYC+  HV +A + + +M   GI P + + 
Sbjct: 755 LELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTY 814

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSE----GVDPDSISYNTLINGFVREENMDKAFALVS 404
           NT++ G   +G   +  E   K+VSE    G+ P++ +Y+ L++G+ R  N  K   L  
Sbjct: 815 NTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHI 874

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M  +G VP + TYNV+++ + + G+M ++  +L  ++ KG  P+  TY  L  G ++ +
Sbjct: 875 EMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLS 934

Query: 465 NLKEAFRFHDEMLQRGF 481
              E     D  L+R +
Sbjct: 935 YEPEI----DRSLKRSY 947



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 247/495 (49%), Gaps = 33/495 (6%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           +  +A      M   G+ P    +NTL+  +   G + +   + + M   G+ P VF+ N
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVN 133

Query: 70  SLINGLCKKGRCD------RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            L++ LCK G  D      R  +V+D         D  TYNT++   C+K  + +   + 
Sbjct: 134 VLVHSLCKVGDLDLALGYLRNNDVVD--------IDNVTYNTVIWGFCQKGLVDQGFGLL 185

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM +RG+  D ++ + L+  + R G +  A      +   G+  D +    +I+GYC  
Sbjct: 186 SEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEA 245

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE---------- 233
             + +A ++ +        +D+VTYNT+L   C+   LT A+ LFNE+L           
Sbjct: 246 VLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKN 305

Query: 234 ---------RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
                    + + P   T+TTLI  +CK   + ++ +L+  M    I PD+VT ++++ G
Sbjct: 306 NDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYG 365

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           FC+ G++ +A  L+ +M    + PN++SY  +IN     G V EAF L  +MV +GI   
Sbjct: 366 FCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFD 425

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           +V+C T++ G  + G   +A+E    ++   + P+ ++Y+ L++G+ +   M+ A  ++ 
Sbjct: 426 IVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQ 485

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           KME + + P+VIT++ I+ G+ ++G +  +  +L  M+++ + P+   Y  LI+G+    
Sbjct: 486 KMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAG 545

Query: 465 NLKEAFRFHDEMLQR 479
               A  F  EM  R
Sbjct: 546 EQDVADDFCKEMKSR 560



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 236/469 (50%), Gaps = 21/469 (4%)

Query: 35  TLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
           TLI  Y        A    + M   GL P +  +N+L+      G   + K +  +ML  
Sbjct: 64  TLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFC 123

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G+ PD  + N L+   C+  ++  A       +   V  D V+++T+I  F + G +D+ 
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYL--RNNDVVDIDNVTYNTVIWGFCQKGLVDQG 181

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
                EM   GL  D++   I++ GYCR G V  A  +   +++ G   DV+  NT+++G
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF----------- 263
            C A ++++A +L        V  D  T+ TL+   CK G++ +A +LF           
Sbjct: 242 YCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDED 301

Query: 264 -----DIMTQKSIK---PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
                D++TQ  IK   P +VTY TLI  +CK   +E+++ L+  MI   I P+ ++   
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSS 361

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           ++ G+C  G +TEA  L+ EM   G+ P  VS  TII    +SG   +A    S+MV  G
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG 421

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           +  D ++  T+++G  +     +A  +   +    L P+ +TY+ +L G+C+ G+M  +E
Sbjct: 422 ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE 481

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L+L +M ++ + P+  T++++ING+  +  L +A     EM+QR  +P+
Sbjct: 482 LVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 530



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 231/489 (47%), Gaps = 77/489 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  K++ A++ L +ME++ V P+ +T++++IN Y ++G L +A  ++  M  + 
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    Y  LI+G  K G  D A +   EM    L      ++ LL    R   M EA 
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 586

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---------------- 164
            +  +M  +G+ PDIV++++LI  + + G    AL   +EMK                  
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 646

Query: 165 ------------------GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
                             GL PD + Y  IIN YC  G   +AL + +EM   G + + V
Sbjct: 647 LRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAV 706

Query: 207 TYNTILNGLCRA---------KMLTEADD---------------------------LFNE 230
           TYN ++ GLC+          K L +A                             + +E
Sbjct: 707 TYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDE 766

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG- 289
           M++RG+  D  T+  LI G+C   ++ KAL  +  M    I P+I TYNTL+ G    G 
Sbjct: 767 MVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGL 826

Query: 290 ---EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
               ME+  KL ++M  R + PN  +Y IL++GY  +G+  +   L  EM+ KG  PTL 
Sbjct: 827 MEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLK 886

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR---EENMDKAFALV 403
           + N +I  Y +SG   +A E L+ ++++G  P+S +Y+ L  G++    E  +D++    
Sbjct: 887 TYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRS 946

Query: 404 SKMENQGLV 412
            ++E + L+
Sbjct: 947 YEIEVKKLL 955


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 144/452 (31%), Positives = 248/452 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++D     L +  + G+ P  VT+ TLIN   + G   +A +L + M  +G
Sbjct: 16  LINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P  +TY ++INGLCK G    A  +  +M + G   +  TY+TL+   C+   ++EA 
Sbjct: 76  CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEAL 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M  + ++P I ++++LI       +   A     EM S  ++P+ V + ++++ +
Sbjct: 136 DIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTF 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G VL A  +   M E G   DVVTYN+++ G      + EA  LF+ M+ +G  PD 
Sbjct: 196 CKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDV 255

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++++ LI+G+CK   +++A  LF+ M  +   P+ V+YNTLI G C++G + +A  L+ +
Sbjct: 256 FSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKN 315

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +    PN  +Y IL++G+C  G++ +AFRL+  M    +KP LV  N ++   C+SG+
Sbjct: 316 MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN 375

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E  S++   G+ P+   Y T+ING  +E  +D+A      ME+ G  PD  +YNV
Sbjct: 376 LKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNV 435

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           I+ GF +      +  ++  M ++G   D  T
Sbjct: 436 IIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 245/464 (52%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           ME  G+ P+T T N LIN +C+   ++  F ++      GL+P + T+ +LINGL K G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
             +A E+ D+M+  G  PD  TY T++   C+    + A  +F +M   G   ++V++ST
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    +  +++ AL  F  MK+  + P    YT +I G C      EA  + +EM    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            + +VVT+N +++  C+   +  A+ +   M E GV PD  T+ +L++G+     + +A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            LFD+M  K  KPD+ +Y+ LI+G+CK   +++A +L+ +MI +  +PN +SY  LI+G 
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +G + EA  L+  M   G  P L +   ++ G+C+ G   KA      M S  + P+ 
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           + YN L+N   +  N+  A  L S++   GL P+V  Y  I+ G C++G + ++      
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M + G  PD  +Y  +I G +   +   A     EM  RGF+ D
Sbjct: 421 MEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/430 (33%), Positives = 226/430 (52%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M   GL P   T N LIN  C+  R D    VL + +++GL P   T+ TL+    +   
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
            ++A E+F +M  RG  PD  +++T+I    + G+   A   F++M+ AG   + V Y+ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I+  C+   V EAL +   M  K     + TY +++ GLC      EA  L NEM    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P+  TF  L+   CK+G +  A  +   MT+  ++PD+VTYN+L+ G+    E+ +A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           KL+  MI++   P+  SY ILINGYC    + EA +L+ EM+ +G  P  VS NT+I G 
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+ G   +A +    M + G  P+  +Y  L++GF ++  + KAF L   M++  L P++
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           + YN+++   C+ G + D+  +   +   GL P+   YTT+ING   +  L EA      
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420

Query: 476 MLQRGFVPDD 485
           M   G  PD+
Sbjct: 421 MEDDGCPPDE 430


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  278 bits (710), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 261/485 (53%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   CK  K++ A+  L EME++ GV  D   Y  LI+ YC+ G + +A ++ + M   
Sbjct: 142 LIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKV 201

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GLK  +F  NSLING CK G+    + +L  M ++ L PD+ +Y TL+   CR    S+A
Sbjct: 202 GLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKA 261

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  +M R+G+ P +V+++TL+    R G    AL  +  M   G+ P+ V Y  +++G
Sbjct: 262 FNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDG 321

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G    AL + D++L +G    +  +NT++NGLC+   +  A + F  M E G  PD
Sbjct: 322 LFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPD 381

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL  G+CK GN+ +A  + + M ++ I P I  YN+LI G     ++ K   L A
Sbjct: 382 GITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLA 441

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M +R +SPN ++YG LI G+C  G + +AF  ++EM+GKG  P ++ C+ I+    R G
Sbjct: 442 EMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLG 501

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+  L KMV   +  D        N  +R+ +  K    + +   +  +P+ + YN
Sbjct: 502 RIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYN 561

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           + + G C+ G+++D+      +      PD  TY TLI+G  +   + EAF   DEM+ +
Sbjct: 562 IAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNK 621

Query: 480 GFVPD 484
           G VP+
Sbjct: 622 GLVPN 626



 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 151/465 (32%), Positives = 261/465 (56%), Gaps = 1/465 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G  P   + N+L++   + G    A  + + M    + P VFT   ++N  CK G+
Sbjct: 22  MGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGK 81

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            +RA E + EM ++G   +  +YN+L+       ++  A+ +   MS +GV  + V+ + 
Sbjct: 82  VERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTL 141

Query: 141 LIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           LI  + +  +++ A    REM K  G+V D   Y  +I+GYC+ G + +A+++RDEML+ 
Sbjct: 142 LIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKV 201

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  M++   N+++NG C+   + E + L   M +  + PD Y++ TL+ G+C+DG  +KA
Sbjct: 202 GLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKA 261

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            N+ D M +K I+P +VTYNTL+ G C+ G+ + A +LW  M+ R ++PN + Y  L++G
Sbjct: 262 FNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDG 321

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
              MG  + A  LW +++ +GI  ++ + NT+I G C+ G+   A E   +M   G  PD
Sbjct: 322 LFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPD 381

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y TL +G+ +  N+++AF +  KME + + P +  YN ++ G     ++     +L 
Sbjct: 382 GITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLA 441

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M  +GL+P+  TY  LI G   Q  L +AF  + EM+ +GF P+
Sbjct: 442 EMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPN 486



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 266/546 (48%), Gaps = 70/546 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK+ ++   +  L  M +  + PD+ +Y TL++ YCR+G   +AF + + M  KG
Sbjct: 213 LINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKG 272

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYN+L+ GLC+ G    A  +   MLQ G++P+   Y TLL    +  + S A 
Sbjct: 273 IEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRAL 332

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ ++  RG+   I +F+T+I    + G++D A   F+ M+  G  PD + Y  + +GY
Sbjct: 333 TLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGY 392

Query: 181 CRNGFVLEAL--------------------------------KMRD---EMLEKGCVMDV 205
           C+ G V EA                                 K+ D   EM  +G   +V
Sbjct: 393 CKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNV 452

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA------ 259
           VTY  ++ G C    L +A   + EM+ +G  P+    + ++    + G +++A      
Sbjct: 453 VTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK 512

Query: 260 --------------------------LNLFDIMTQKSIK---PDIVTYNTLIDGFCKVGE 290
                                       + D + + +IK   P+ V YN  + G CK G+
Sbjct: 513 MVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGK 572

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           +  A + +  +     +P+  +Y  LI+G+ + G+V EAF L  EMV KG+ P + + N 
Sbjct: 573 VNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNA 632

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++ G C+SG   +A     K+  +G+ P+ ++YN LI+G+ +  +  +A  L  KM  +G
Sbjct: 633 LLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEG 692

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           + P +ITY+ ++ GFC+Q  + ++  +L  M    ++   +T++ L+ G +   ++K+  
Sbjct: 693 ISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMS 752

Query: 471 RFHDEM 476
           + H+ M
Sbjct: 753 KLHNMM 758



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 170/344 (49%), Gaps = 38/344 (11%)

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           +I+  Y   G V  AL + D M + G    + + N++L+ L +      A  ++++M   
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            + PD +T   +++ +CK G + +A+     M +   + + V+YN+L+DG+  +G++E A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 295 NKLWADMISRKISPNYI------------------------------------SYGILIN 318
             +   M  + +  N +                                    +YG LI+
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           GYC +G + +A R+  EM+  G+K  L  CN++I GYC++G   + +  L  M    + P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           DS SY TL++G+ R+    KAF +  +M  +G+ P V+TYN +L G CR G   D+ L L
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDA-LRL 299

Query: 439 WR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           W  M+++G+ P+   Y TL++G     +   A    D++L RG 
Sbjct: 300 WHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGI 343


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 155/492 (31%), Positives = 253/492 (51%), Gaps = 8/492 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +  +  + D A      M++K   PD  T+  L++  C+ G  E+AF++ + M   G
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219

Query: 61  -LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P    + +++  L K  R   A+EV  +M + G  PD   YNT++    +  +  EA
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEA 279

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++   M  +   P  V++  L+    + G L+RA   FR M ++G  P++V+YT +I+G
Sbjct: 280 LKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG 339

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + ++G + EA  + DEM+E G   DV+T+  +++GLC++    +A   F EM+  G  P+
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TT+I G  K G +  A  +   M      PD VTY  L+DGFCK+G +++A +L  
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM---VGKGIKPTLVSCNTIIKGYC 356
           ++     SPN   Y  L+ G C  G V       +E      + + P L  C +II G C
Sbjct: 460 ELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGL--CCSIIVGLC 517

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR--EENMDKAFALVSKMENQGLVPD 414
           ++G   +A     +MVSEG  PD+ +YN LING  R  E  +++AFAL+  +E  G +PD
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPD 577

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +TY  +  G C+ G +  +  +L     +G N D   YT L  G   Q  +  A     
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 475 EMLQRGFVPDDA 486
           EM+++G  PD A
Sbjct: 638 EMVRQGGAPDAA 649



 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 252/492 (51%), Gaps = 8/492 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG-VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V+ LCK    + A     EM   G V PD   +  ++    +   ++EA ++   M   
Sbjct: 195 LVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKC 254

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P    YN++I+GL K G    A +VLD ML     P   TY  L+   C+   +  A
Sbjct: 255 GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERA 314

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           EE+F  M+  G  P+ V +++LI  F+++G++  A   F EM  AG  PD + +T++I+G
Sbjct: 315 EELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDG 374

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C++G   +A K  +EM+  GC  +VVTY TI+ GL +   +  A  +   M+  G FPD
Sbjct: 375 LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPD 434

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+ G CK G +++A  L D + + S  P++  Y++L+ G C  G +E  N L  
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE--NTLDD 492

Query: 300 DMISRKISPNYISYGI---LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
                K +   +  G+   +I G C  G + EA R++  MV +G KP   + N +I G C
Sbjct: 493 LFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC 552

Query: 357 RSGD--ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           RS +    +A   L  +   G  PD+++Y  L  G  +   +D+A  ++ +  ++G   D
Sbjct: 553 RSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNAD 612

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V+ Y  + TG C QG++  +  +   M+ +G  PD + Y  +ING +    L++A +F D
Sbjct: 613 VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFD 672

Query: 475 EMLQRGFVPDDA 486
           EM+ +G  P  A
Sbjct: 673 EMIGKGQKPTVA 684



 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 242/483 (50%), Gaps = 3/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV  L K  ++  A+    +ME+ G  PD + YNT+I+   + G  +EA +++++M  K 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY  L+N LCK G  +RA+E+   M   G  P++  Y +L+    +   M EA 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM   G  PD+++ + +I    ++G  ++A   F EM   G  P+ V YT II G 
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V  A ++   M+  GC  D VTY  +L+G C+   L EA  L +E+ +    P+ 
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470

Query: 241 YTFTTLIHGHCKDGNMNKALN-LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             +++L+ G C  G++   L+ LF+     +   D     ++I G CK G +++A +++ 
Sbjct: 471 QLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQ 530

Query: 300 DMISRKISPNYISYGILINGYCSM--GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
            M+S    P+  +Y ILING C      V  AF L +++   G  P  V+   +  G C+
Sbjct: 531 RMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCK 590

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G+  +A + L +  S G + D ++Y  L  G   +  +D+A +L  +M  QG  PD   
Sbjct: 591 IGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAA 650

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y  I+ G  +  ++ D+      MI KG  P  +TYT L+       N+ EAF   + ML
Sbjct: 651 YCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGML 710

Query: 478 QRG 480
            RG
Sbjct: 711 ARG 713



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/470 (31%), Positives = 233/470 (49%), Gaps = 10/470 (2%)

Query: 22  EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC 81
           EQ G   D  TYN L+N    E    + + +   M   G+ P  F++N LI    +  R 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG-VAPDIVSFST 140
           D A    + M +    PD  T+  L+   C+     +A E+F EM   G V PD    + 
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++    +  ++  A   F +M+  G  PD + Y  +I+G  + G   EALK+ D ML K 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV   VTY  ++N LC+A  L  A++LF  M   G  P+   +T+LIHG  K G M +A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +LFD M +   +PD++T+  +IDG CK G  E+A K + +M+     PN ++Y  +I G 
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G V  AFR+   M+  G  P  V+   ++ G+C+ G   +A + L ++      P+ 
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470

Query: 381 ISYNTLINGFVR----EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
             Y++L+ G       E  +D  F   SK   + L P +     I+ G C+ GR+ ++  
Sbjct: 471 QLYSSLVKGLCDGGSVENTLDDLFEQ-SKAAAENLDPGLCCS--IIVGLCKTGRLDEACR 527

Query: 437 ILWRMIEKGLNPDRSTYTTLING--HVSQNNLKEAFRFHDEMLQRGFVPD 484
           I  RM+ +G  PD +TY  LING     +N ++ AF    ++   G++PD
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPD 577



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 238/463 (51%), Gaps = 4/463 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  ++  A     EM + G  PD +T+  +I+  C+ G  E+A +    M   G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY ++I GL K GR   A  ++  M+  G  PD+ TY  LL   C+   + EA 
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM-YFREMKSAGLVPDNVLYTIIING 179
           ++  E+ +   +P++  +S+L+      G ++  L   F + K+A    D  L   II G
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVG 515

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK--MLTEADDLFNEMLERGVF 237
            C+ G + EA ++   M+ +GC  D  TYN ++NGLCR++   +  A  L +++   G  
Sbjct: 516 LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYL 575

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+T L  G CK G +++A+ + +  + +    D+V Y  L  G C  G++++A  L
Sbjct: 576 PDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSL 635

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           + +M+ +  +P+  +Y  +ING      + +A + + EM+GKG KPT+ +   +++  C 
Sbjct: 636 FQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695

Query: 358 SGDASKADEFLSKMVSEGVDPDSIS-YNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           +G+  +A      M++ G    S+  Y+ LI+GF +   +D A  L   M ++G VP  +
Sbjct: 696 AGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAV 755

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           T   +  G  R G+   ++ +L  M   G  P  +T+T +++G
Sbjct: 756 TSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDG 798



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 208/444 (46%), Gaps = 39/444 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK    + A     EM + G  P+ VTY T+I    + G +  AF++M  M   G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL-------------- 106
             P   TY  L++G CK GR D A ++LDE+ +   SP+   Y++L              
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490

Query: 107 ----------------------LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
                                 +V  C+   + EA  IF  M   G  PD  +++ LI  
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 145 F--SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
              SR  +++RA     +++  G +PD V YT +  G C+ G V  A+KM +E   +G  
Sbjct: 551 LCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DVV Y  +  GLC    +  A  LF EM+ +G  PD   +  +I+G  K   +  A   
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKF 670

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILINGYC 321
           FD M  K  KP + TY  L+   C  G +++A   +  M++R ++  + + Y  LI+G+C
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFC 730

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
               V  A +L+ +M+ +G  PT V+  ++  G  RSG   KA E L +M + G  P + 
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAA 790

Query: 382 SYNTLINGFVREENMDKAFALVSK 405
           ++  +++G  + +   K   LV +
Sbjct: 791 TFTAILDGLRKSDESGKLLKLVQE 814



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 54/111 (48%)

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G   D  +YN L+N  V E+N  + +A+  +M   G+ P+  ++N+++  F R  R  D+
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                 M  K   PD  T+  L++        ++AF    EM+  GFVP D
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 265/487 (54%), Gaps = 3/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG-VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +VN  CK  ++  A++    M++ G   P+ VTY+ LI+ YC+ G + E   L+  M  +
Sbjct: 155 LVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GLK  VF Y+SLI+  C +G  +  +E+ DEML+  +SP+  TY+ L+    R     EA
Sbjct: 215 GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREA 274

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+  +M+ RGV PD+V+++ L     +NG+   A+     M   G  P  + Y +++NG
Sbjct: 275 SEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNG 334

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG--VF 237
            C+   + +A  + + M++KG   D VTYNT+L GLC A  + EA DL+  +L     V 
Sbjct: 335 LCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVK 394

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD +T   LI G CK+G ++ A  +   M +  ++ +IVTYN LI+G+    ++ +A KL
Sbjct: 395 PDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKL 454

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           W   +    SPN ++Y ++ING C M  ++ A  L+ +M   GI+PT++  N ++   CR
Sbjct: 455 WKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCR 514

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
                +A     +M +   + D +S+N +I+G ++  ++  A  L+S+M    LVPD +T
Sbjct: 515 EDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVT 574

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           +++++  F + G + ++  +  +M+  G  P    + +L+ G+  +   ++      +M 
Sbjct: 575 FSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMA 634

Query: 478 QRGFVPD 484
            +  V D
Sbjct: 635 DKDVVLD 641



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 253/524 (48%), Gaps = 40/524 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  + D+      +M    V P   + + L  ++        AF +++ M+ +G
Sbjct: 48  LIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRG 107

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM--GLSPDTATYNTLLVESCRKENMSE 118
               V+  N ++ G C+ G+CD+A  +  +M +    + PD  TYNTL+   C+ + ++E
Sbjct: 108 FGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAE 167

Query: 119 AEEIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           A  +F  M + G   P++V++S LI  + ++G++   L    EM+  GL  D  +Y+ +I
Sbjct: 168 ARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLI 227

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           + +C  G +    ++ DEML +    +VVTY+ ++ GL R     EA ++  +M  RGV 
Sbjct: 228 SAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVR 287

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD   +T L  G CK+G    A+ + D+M QK  +P  +TYN +++G CK   M+ A  +
Sbjct: 288 PDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGV 347

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG--IKPTLVSCNTIIKGY 355
              M+ +   P+ ++Y  L+ G C  G + EA  LW  ++ +   +KP + +CN +I+G 
Sbjct: 348 VEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGL 407

Query: 356 CRSGDASKADEFLSKM-----------------------------------VSEGVDPDS 380
           C+ G    A    S M                                   V  G  P+S
Sbjct: 408 CKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNS 467

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++Y+ +ING  + + +  A  L  KM++ G+ P VI YN ++T  CR+  +  +  +   
Sbjct: 468 MTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQE 527

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M     N D  ++  +I+G +   ++K A     EM     VPD
Sbjct: 528 MRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPD 571



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 210/392 (53%), Gaps = 8/392 (2%)

Query: 97  SPDTATYNTLLVESCRKENMSEAE-EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           SP +    + L+++ RK    +A   ++ +M    V P   S S L   F        A 
Sbjct: 38  SPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAF 97

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK-GCVM-DVVTYNTILN 213
                M   G   +     +++ G+CR+G   +A+ +  +M     CV+ D VTYNT++N
Sbjct: 98  SVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVN 157

Query: 214 GLCRAKMLTEADDLFNEMLERG-VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           G C+AK L EA  LF  M + G   P+  T++ LI  +CK G + + L L + M ++ +K
Sbjct: 158 GFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLK 217

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            D+  Y++LI  FC  G++E   +L+ +M+ RK+SPN ++Y  L+ G    G   EA  +
Sbjct: 218 ADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEM 277

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             +M  +G++P +V+   +  G C++G A  A + L  MV +G +P +++YN ++NG  +
Sbjct: 278 LKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCK 337

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI--EK-GLNPD 449
           E+ MD AF +V  M  +G  PD +TYN +L G C  G++H++ + LW+++  EK  + PD
Sbjct: 338 EDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEA-MDLWKLLLSEKFHVKPD 396

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
             T   LI G   +  + +A R H  M++ G 
Sbjct: 397 VFTCNNLIQGLCKEGRVHDAARIHSSMVEMGL 428



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 237/454 (52%), Gaps = 2/454 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A C +  I++ +    EM ++ V P+ VTY+ L+    R G   EA +++  M+ +G
Sbjct: 226 LISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARG 285

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V  Y  L +GLCK GR   A +VLD M+Q G  P T TYN ++   C+++ M +A 
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG--LVPDNVLYTIIIN 178
            +   M ++G  PD V+++TL+      G++  A+  ++ + S    + PD      +I 
Sbjct: 346 GVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQ 405

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C+ G V +A ++   M+E G   ++VTYN ++ G   A+ L EA  L+   +E G  P
Sbjct: 406 GLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSP 465

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  T++ +I+G CK   ++ A  LF  M    I+P ++ YN L+   C+   +E+A  L+
Sbjct: 466 NSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLF 525

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M +   + + +S+ I+I+G    G V  A  L  EM    + P  V+ + +I  + + 
Sbjct: 526 QEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKL 585

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A     KMVS G  P  + +++L+ G+  +   +K  +L+ +M ++ +V D    
Sbjct: 586 GMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLT 645

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           + IL   C   R  D E IL +  ++  +  + T
Sbjct: 646 STILACLCHMSRNLDVEKILPKFSQQSEHTSKGT 679



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 224/427 (52%), Gaps = 5/427 (1%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P     ++LI+ L K  + D    V  +M+   + P   + + L        + S A  +
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA--GLVPDNVLYTIIINGY 180
              M++RG   ++ + + ++  F R+GQ D+A+  F +MK     +VPD V Y  ++NG+
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 181 CRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+   + EA  + + M + G C  ++VTY+ +++  C++  + E   L  EM   G+  D
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            + +++LI   C +G++     LFD M ++ + P++VTY+ L+ G  + G   +A+++  
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM +R + P+ ++Y +L +G C  G   +A ++   MV KG +P  ++ N ++ G C+  
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM--ENQGLVPDVIT 417
               A   +  MV +G  PD+++YNTL+ G      + +A  L   +  E   + PDV T
Sbjct: 340 RMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFT 399

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            N ++ G C++GR+HD+  I   M+E GL  +  TY  LI G+++   L EA +     +
Sbjct: 400 CNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAV 459

Query: 478 QRGFVPD 484
           + GF P+
Sbjct: 460 ESGFSPN 466


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  277 bits (709), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 151/457 (33%), Positives = 254/457 (55%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  T+N +I+  C++G L EA  L   M   G  P V TYNSLI+G  K G  +  + +
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           + EM + G + D  TYN L+    +   + +A   F EM R GV  ++V+ ST +  F +
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +  A+  F +M+  G++P+   YT +++G C+ G + +A+ + DEM+ +G V +VVT
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y  +++GLC+   +  ADD+ + M   GV  +   +TTLIHGH  + N  +AL+L + M 
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMK 436

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K ++ D+  Y TLI G CKV ++++A  L   M    + PN + Y  +++ +   G  +
Sbjct: 437 NKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKES 496

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L +++   G++P +V+   +I G C++G   +A     KM   G+DP+   Y TLI
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +GF +  ++ KA  L+++M ++G+  D + Y  ++ G  +QG +  +  +  +MIE GL 
Sbjct: 557 DGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQ 616

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D   YT  I+G  + N ++EA     EM+  G  PD
Sbjct: 617 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPD 653



 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/476 (32%), Positives = 258/476 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  A+     M+  G  PD VTYN+LI+ Y + G LEE   L++ M   G
Sbjct: 205 VIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSG 264

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V TYN+LIN   K G  ++A     EM ++G+  +  T +T +   C++  + EA 
Sbjct: 265 CAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAM 324

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M  RG+ P+  ++++L+    + G+LD A++   EM   GLVP+ V YT++++G 
Sbjct: 325 KLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL 384

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  A  +   M   G   + + Y T+++G    K    A DL NEM  +G+  D 
Sbjct: 385 CKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDV 444

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TLI G CK   +++A +L   M    ++P+ V Y T++D F K G+  +A  L   
Sbjct: 445 SLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHK 504

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + PN ++Y  LI+G C  G + EA   + +M   G+ P +    T+I G+C+ G 
Sbjct: 505 IPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGS 564

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            SKA   +++MV +G+  D + Y +LI+G +++ ++  AFAL +KM   GL  D+  Y  
Sbjct: 565 LSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTC 624

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            ++GFC    M ++  +L  MI  G+ PD++ Y  LI  +    N++EA    +EM
Sbjct: 625 FISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 266/485 (54%), Gaps = 11/485 (2%)

Query: 4   ALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCRE---GFLEEAFQLMNSMSGK 59
           +L  DH + D A   L  + Q  V P+T T N ++    R    G +   F+ + +    
Sbjct: 141 SLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA---- 196

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P VFT+N +I+ LCK+G    A+ +   M  MG SPD  TYN+L+    +   + E 
Sbjct: 197 ---PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEV 253

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E +  EM + G A D+V+++ LI  FS+ G +++A  YF EMK  G++ + V  +  ++ 
Sbjct: 254 ELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDA 313

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G V EA+K+  +M  +G + +  TY ++++G C+A  L +A  L +EM+ +G+ P+
Sbjct: 314 FCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 373

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T ++ G CK+G +  A ++  +M +  +K + + Y TLI G       E+A  L  
Sbjct: 374 VVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLN 433

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M ++ +  +   YG LI G C +  + EA  L ++M   G++P  V   TI+  + ++G
Sbjct: 434 EMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAG 493

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S+A   L K+   G+ P+ ++Y  LI+G  +  ++ +A +   KM   GL P+V  Y 
Sbjct: 494 KESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYT 553

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ GFC+ G +  +  ++  M++KG++ D+  YT+LI+GH+ Q +L+ AF    +M++ 
Sbjct: 554 TLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIET 613

Query: 480 GFVPD 484
           G   D
Sbjct: 614 GLQLD 618



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 230/408 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   K   I+ A  +  EM++ GV  + VT +T ++A+C+EG + EA +L   M  +G
Sbjct: 275 LINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRG 334

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTY SL++G CK GR D A  +LDEM+  GL P+  TY  ++   C++  ++ A+
Sbjct: 335 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVAD 394

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M R GV  + + ++TLI     N   +RAL    EMK+ G+  D  LY  +I G 
Sbjct: 395 DVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGL 454

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA  +  +M + G   + V Y TI++   +A   +EA  L +++ + G+ P+ 
Sbjct: 455 CKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNV 514

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK G++ +A++ FD M +  + P++  Y TLIDGFCK+G + KA  L  +
Sbjct: 515 VTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNE 574

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + +S + + Y  LI+G+   G +  AF L  +M+  G++  L      I G+C    
Sbjct: 575 MVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNM 634

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +A   LS+M+  G+ PD  +YN LI  + +  NM++A +L ++ME+
Sbjct: 635 MQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 109/252 (43%), Gaps = 41/252 (16%)

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            +S  P +  ++TL+      G ++ A +  A +   ++ PN  +   ++          
Sbjct: 128 HRSALPSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG 185

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
              RL+  +      P + + N +I   C+ G+  +A     +M + G  PD ++YN+LI
Sbjct: 186 LVRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLI 241

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILT------------------------ 423
           +G+ +   +++   LVS+M   G   DV+TYN ++                         
Sbjct: 242 DGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVM 301

Query: 424 -----------GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
                       FC++G + ++  +  +M  +G+ P+  TYT+L++G      L +A   
Sbjct: 302 ANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 361

Query: 473 HDEMLQRGFVPD 484
            DEM+ +G VP+
Sbjct: 362 LDEMVHQGLVPN 373


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 168/547 (30%), Positives = 265/547 (48%), Gaps = 71/547 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  K D AK  +  +   G+      Y  +I+  C+ G L+E+ QL++ M   G
Sbjct: 156 LLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDG 215

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + T++ LING CK G+   AKEV+ +M + GL+P+   Y TL+  SC+K +++EA 
Sbjct: 216 ASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAF 275

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  M+R G   D    + LI    R G++  A  + R M +  L P+++ +  IINGY
Sbjct: 276 RNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGY 335

Query: 181 CRNGFVLEALKMRDEMLEKG-----------------------------------CVMDV 205
              G  L+A  M DEM++ G                                     +D 
Sbjct: 336 GILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDT 395

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL----- 260
             YNTIL+  C+   L++A  LF EM++  V PD +T+  ++ G  + G M  AL     
Sbjct: 396 NIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEK 455

Query: 261 ---------------NLFD----------------IMTQKSIKPDIVTYNTLIDGFCKVG 289
                          +LFD                 M  K I PD +  N ++DG+ ++G
Sbjct: 456 ALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMG 515

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           +MEK  KL+  M S  ++P+  +Y IL++GY     + +  + +  M   GI P  ++C+
Sbjct: 516 KMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCH 575

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +II G C+SG      + L KM+ E    D ++ N LI      + M KAF L++     
Sbjct: 576 SIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLL 635

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G++PDV TYN I TG  R   + +S L+L  M+E+G+ P  + Y +LING     +++ A
Sbjct: 636 GIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGA 695

Query: 470 FRFHDEM 476
           FR  DEM
Sbjct: 696 FRLKDEM 702



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 257/485 (52%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +  +A   +  ME KG+  D  TYN LI+  C+     + + L+  M  + 
Sbjct: 16  ILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRM 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTYN+LINGL K+ +   A  V +EML + LSP+  TYN L+   C   N  +A 
Sbjct: 76  IAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQAL 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G+ PD V++  L+   S+  + D A      ++ +G+V     YT +I+G 
Sbjct: 136 RLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGL 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G + E+L++ D M + G   D++T++ ++NG C+A  +  A ++  +M + G+ P++
Sbjct: 196 CKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNY 255

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TLI+  CK G++ +A   +  MT+     D    N LI   C+ G + +A      
Sbjct: 256 VIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRH 315

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  ++PN I++  +INGY  +G   +AF ++ EM+  G  P+  +  +++KG C+ G+
Sbjct: 316 MSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGN 375

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + L K+       D+  YNT+++   +   +  A AL  +M    ++PD  TY +
Sbjct: 376 LREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAI 435

Query: 421 ILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           IL G  R+G+M  + L   + + +G L+P++  YT+L +G         A   ++EM  +
Sbjct: 436 ILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHK 495

Query: 480 GFVPD 484
           G  PD
Sbjct: 496 GINPD 500



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 230/429 (53%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M G G  P + TYN+++N  CKKGR   A +++D M   G+  D  TYN L+ + C+   
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
            ++   +  +M +R +AP+  +++TLI    +  ++  A   F EM    L P+ V Y I
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I+G+C  G   +AL++ D M  KG   D V Y  +L+GL +      A  L   +   G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           +   +  +T +I G CK G ++++L L D+M +    PDI+T++ LI+GFCK G+++ A 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           ++   M    ++PNY+ Y  LI   C  G +TEAFR +  M   G       CN +I   
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           CR+G  ++A++F+  M +  + P+SI+++ +ING+    +  KAF++  +M   G  P  
Sbjct: 301 CRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSH 360

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            TY  +L G C+ G + +++ +L+++       D + Y T+++    +  L +A     E
Sbjct: 361 FTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGE 420

Query: 476 MLQRGFVPD 484
           M+Q   +PD
Sbjct: 421 MVQFNVLPD 429



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 258/520 (49%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC+  ++  A+ F+  M    + P+++T++ +IN Y   G   +AF + + M   G
Sbjct: 296 LISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLG 355

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY SL+ GLCK G    AK++L ++  +  + DT  YNT+L E+C++  +S+A 
Sbjct: 356 HCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAV 415

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIING 179
            +F EM +  V PD  +++ ++   SR G++  AL++F +  + G L P+ V+YT + +G
Sbjct: 416 ALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDG 475

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G    A  + +EM  KG   D +  N +L+G  R   + + + LF +M    + P 
Sbjct: 476 LFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPS 535

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+HG+ K  ++ K    ++IMT+  I PD +T +++I G CK G ++   K+  
Sbjct: 536 LATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLK 595

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLW-------------------------- 333
            MI      + ++  +LI   C    + +AF L                           
Sbjct: 596 KMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRAS 655

Query: 334 ---------YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
                    ++M+ +GI PT     ++I G CR GD   A     +M + GV    ++ +
Sbjct: 656 ALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAES 715

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            ++ G  +   +++A  ++  M  + L+P V T+  ++   C++ ++ ++  +  +M   
Sbjct: 716 AMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALY 775

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G+  D   Y  LI+G  +  +   AF  ++EM +RG  P+
Sbjct: 776 GVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPN 815



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 232/465 (49%), Gaps = 2/465 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK   +  AK  L ++       DT  YNT+++  C+ G L +A  L   M    
Sbjct: 366 LLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFN 425

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
           + P   TY  ++ GL +KG+   A    ++ L  G LSP+   Y +L     +    + A
Sbjct: 426 VLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAA 485

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             I+ EM  +G+ PD ++ + ++  +SR G++++    F +M+S  L P    Y I+++G
Sbjct: 486 SYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHG 545

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y +   +L+  K  + M   G   D +T ++I+ GLC++ ML     +  +M+      D
Sbjct: 546 YSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVD 605

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T   LI   C+   M KA +L +I     I PD+ TYN +  G  +   + +++ L  
Sbjct: 606 QLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLH 665

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM+ R I+P    Y  LING C MG +  AFRL  EM   G+    V+ + +++G  + G
Sbjct: 666 DMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCG 725

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   L  M+ + + P   ++ TL++   ++  + +A  L  KM   G+  DV+ YN
Sbjct: 726 KVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYN 785

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           V+++G C  G    +  +   M E+GL P+ +TY TLI+  +S N
Sbjct: 786 VLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDA-ISTN 829



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 196/425 (46%), Gaps = 36/425 (8%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG-LKPG 64
           CK  K+  A     EM Q  V PD+ TY  ++    R+G +  A         +G L P 
Sbjct: 406 CKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPN 465

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDT------------------------ 100
              Y SL +GL K G+ + A  + +EM   G++PDT                        
Sbjct: 466 KVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFI 525

Query: 101 -----------ATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
                      ATYN LL    +K+++ +  + +  M+R G++PD ++  ++I    ++G
Sbjct: 526 KMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSG 585

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            LD      ++M     + D +   ++I   C    + +A  + +     G + DV TYN
Sbjct: 586 MLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYN 645

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            I  GL RA  L E+  L ++MLERG+ P    + +LI+G C+ G++  A  L D M   
Sbjct: 646 AIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAI 705

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            +    V  + ++ G  + G++E+A  +   M+ +++ P   ++  L++  C    ++EA
Sbjct: 706 GVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEA 765

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            +L  +M   G+K  +V+ N +I G C  GDA  A     +M   G+ P++ +Y TLI+ 
Sbjct: 766 LKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDA 825

Query: 390 FVREE 394
               E
Sbjct: 826 ISTNE 830



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 81/150 (54%)

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M G G  PT+V+ NTI+   C+ G    A + + +M S+G++ D  +YN LI+   +   
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
             K + L+ KM  + + P+  TYN ++ G  ++ ++  +  +   M+   L+P+R TY  
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           LI+GH    N ++A R  D M  +G  PD+
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDE 150



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 1/161 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N +C+   I  A     EME  GV    V  + ++    + G +EEA  +++ M  K 
Sbjct: 682 LINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKR 741

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V T+ +L++ LCKK +   A ++  +M   G+  D   YN L+   C   +   A 
Sbjct: 742 LIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAF 801

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRN-GQLDRALMYFRE 160
            ++ EM  RG+ P+  ++ TLI   S N G+++  L+ + E
Sbjct: 802 NLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVYLE 842


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 261/499 (52%), Gaps = 15/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+   +    + L EME KG  P  VTY +LIN   ++G LE+   L   M  +G
Sbjct: 245 LIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRG 304

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V  YNS+I+ LCK     +A  +L +M   G  PD  T+NTL+   C + ++ +AE
Sbjct: 305 LSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 364

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               E  RR + P+ +S++ LI  F   G+L  A     EM   G  PD V +  +I+G 
Sbjct: 365 HFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGL 424

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V EAL +R++M E+    DV  YN +++GLC+  ML  A ++  EMLE+ V PD 
Sbjct: 425 VVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDE 484

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + TLI G  +  N+  A  +F+ M  K ++PDIV+ N +I G+C+ G M +A    ++
Sbjct: 485 FVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSN 544

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P+  +Y  +I+GY   G++  A R   +M+ +  KP +V+ +++I GYC++GD
Sbjct: 545 MRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGD 604

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A+   + M +E + P+ ++Y  LI    +++ + +A      M      P+ +T + 
Sbjct: 605 TDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHY 664

Query: 421 ILTGF------------CRQGRMH--DSELILWRMIEKGL-NPDRSTYTTLINGHVSQNN 465
           ++ G             C    +H  D+ L++++ +   + +P  S Y  +I      N 
Sbjct: 665 LVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNM 724

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           L+EA  F + M ++G+VP+
Sbjct: 725 LREALDFKNRMAKKGYVPN 743



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 255/485 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L +  + D A+    EM  +    D  +   L+   C EG +EE  +L+ +  G G
Sbjct: 175 LLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAG 234

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  YN LI+G C++G   R   +L EM   G  P   TY +L+    +K ++ +  
Sbjct: 235 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIG 294

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM +RG++P++  ++++I    +     +A++  ++M ++G  PD + +  +I G 
Sbjct: 295 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGL 354

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A     E + +    + ++Y  +++G C    L  A DL  EM+ RG  PD 
Sbjct: 355 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDV 414

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LIHG    G +++AL + + MT++ + PD+  YN LI G CK   +  A  +  +
Sbjct: 415 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEE 474

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+   Y  LI+G+    ++ +A +++  M  KG++P +VSCN +IKGYC+ G 
Sbjct: 475 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGM 534

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A   +S M   G  PD  +Y T+I+G+ ++ N++ A   +  M  +   P+V+TY+ 
Sbjct: 535 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSS 594

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G+C+ G    +E +   M  + L+P+  TYT LI     ++ +  A  + + ML   
Sbjct: 595 LINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 654

Query: 481 FVPDD 485
             P+D
Sbjct: 655 CSPND 659



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 243/474 (51%), Gaps = 1/474 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNS 70
           D+    L  M   G  P       L+ AY   G L +A  +   +  + G  P V   N 
Sbjct: 115 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNR 174

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+  L ++ R D A+++ DEML      D  +   L+   C +  + E  ++       G
Sbjct: 175 LLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAG 234

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P +V ++ LI  + R G + R L+   EM++ G +P  V Y  +IN   + G + +  
Sbjct: 235 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIG 294

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM ++G   +V  YN++++ LC+    T+A  +  +M   G  PD  TF TLI G 
Sbjct: 295 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGL 354

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C +G++ KA +      ++ + P+ ++Y  LI GFC  GE+  A+ L  +M+ R  +P+ 
Sbjct: 355 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDV 414

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +++G LI+G    G V+EA  +  +M  + + P +   N +I G C+      A   L +
Sbjct: 415 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEE 474

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ + V PD   Y TLI+GF+R EN+  A  +   ME++G+ PD+++ N ++ G+C+ G 
Sbjct: 475 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGM 534

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M ++ L +  M + G  PD  TYTT+I+G+  Q NL  A R+  +M++R   P+
Sbjct: 535 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPN 588



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 152/338 (44%), Gaps = 56/338 (16%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK H + +AK  L EM +K V PD   Y TLI+ + R   L +A ++   M  KG
Sbjct: 455 LISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 514

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + + N++I G C+ G    A   +  M ++G  PD  TY T++    ++ N++ A 
Sbjct: 515 VRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 574

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
              C+M +R   P++V++S+LI  + + G  D A   F  M++  L P+ V YTI+I   
Sbjct: 575 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSL 634

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVT--------------------------------- 207
            +   VL A    + ML   C  + VT                                 
Sbjct: 635 FKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALL 694

Query: 208 -----------------YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
                            YN I+  LCR  ML EA D  N M ++G  P+  TF +L++G 
Sbjct: 695 VVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGF 754

Query: 251 CKDGNMNKALNLFDIMTQKSIKPD---IVTYNTLIDGF 285
           C  G   K++N   I+  +  + +   I  Y  L D +
Sbjct: 755 CSVG---KSMNWRTILPNEFQQEEFEIIFRYKFLFDQY 789



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 11/132 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY----PDTVTYNTLINAYCREGFLEEAFQLMNSM 56
           ++N++C +      K  L  + +K V+    P    YN +I + CR   L EA    N M
Sbjct: 676 VINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRM 735

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
           + KG  P   T+ SL+ G C  G+    + +L    Q         Y  L        + 
Sbjct: 736 AKKGYVPNPITFLSLLYGFCSVGKSMNWRTILPNEFQQEEFEIIFRYKFLF-------DQ 788

Query: 117 SEAEEIFCEMSR 128
              E + CE+SR
Sbjct: 789 YATESVCCEVSR 800


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 152/472 (32%), Positives = 259/472 (54%), Gaps = 5/472 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN  CK+ +++ A  F+ E+ ++G  PD VT+N+L+N +CR G + +A  +++ M  KG
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V+TYNSLI+G+CK G  ++A E+L +M+    SP+T TYNTL+   C++  +  A 
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   +  +G+ PD+ +F+TLI     +   D A+  F EMK+ G  PD   Y+I+I+  
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EAL +  EM   GC  + V YNT+++GLC+++ + +A+++F++M   GV    
Sbjct: 414 CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS 473

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G CK+  + +A  L D M  + +KPD  TYN+L+  FC+VG++EKA  +   
Sbjct: 474 VTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQT 533

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    P+  +YG LI G C  G V  A +L   +  KGI  T  + N +I+       
Sbjct: 534 MASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN-MDKAFALVSKMENQGLVPDVITYN 419
             +      +M+ +   PD++++  +  G       + +A     +M  +G++P+  ++ 
Sbjct: 594 TKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFG 653

Query: 420 VILTGFCRQGRMHDSELILWRMI-EKGLNPDRSTYTTLINGHVSQNNLKEAF 470
            +  G C    M D+ + L  M+ EK    +R   T++I G +      +A 
Sbjct: 654 FLAEGLCSLS-MEDTLIELINMVMEKAQMSERE--TSMIRGFLKIRKFNDAL 702



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 258/485 (53%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK H++  A + L EM   G+ PD +T+ TL+  +  EG L  A ++   M G G
Sbjct: 164 LIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYG 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +   L+NG CK+GR + A   + E+ + G SPD  T+N+L+   CR  N+++A 
Sbjct: 224 CLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDAL 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M  +G  PD+ ++++LI    + G+ ++A+   ++M      P+ V Y  +I+  
Sbjct: 284 DIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISAL 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A  +   ++ KG + DV T+NT++ GLC +K    A ++F EM  +G  PD 
Sbjct: 344 CKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDE 403

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LI   C +  + +AL L   M       + V YNTLIDG CK   +E A +++  
Sbjct: 404 FTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQ 463

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +S + ++Y  LI+G C    V EA +L  +M+ +G+KP   + N+++  +CR GD
Sbjct: 464 MELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGD 523

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA + +  M S G +PD  +Y TLI G  R   +D A  L+  ++ +G+V     YN 
Sbjct: 524 IEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNP 583

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           ++     + R  +   +   M+EK   PD  T+  +  G  +    ++EA  F  EML++
Sbjct: 584 VIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEK 643

Query: 480 GFVPD 484
           G +P+
Sbjct: 644 GILPE 648



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 254/483 (52%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +NAL +D+K+   +M   +M  +G+  D  T+N LI A C+   L  A  ++  M+  GL
Sbjct: 130 LNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGL 189

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP   T+ +L+ G  ++G  + A ++  +ML  G      +   L+   C++  + EA  
Sbjct: 190 KPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALR 249

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
              E+S  G +PD V+F++L+  F R G ++ AL     M   G  PD   Y  +I+G C
Sbjct: 250 FVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMC 309

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G   +A+++  +M+ + C  + VTYNT+++ LC+   +  A DL   ++ +G+ PD  
Sbjct: 310 KLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVC 369

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           TF TLI G C   N + A+ +F+ M  K  KPD  TY+ LID  C    +++A  L  +M
Sbjct: 370 TFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM 429

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            S   + N + Y  LI+G C    + +A  ++ +M   G+  + V+ NT+I G C++   
Sbjct: 430 ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRV 489

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A + + +M+ EG+ PD  +YN+L+  F R  +++KA  +V  M + G  PD+ TY  +
Sbjct: 490 EEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTL 549

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + G CR GR+  +  +L  +  KG+      Y  +I     +   KE  R   EM+++  
Sbjct: 550 IGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSD 609

Query: 482 VPD 484
            PD
Sbjct: 610 PPD 612



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 144/467 (30%), Positives = 237/467 (50%), Gaps = 2/467 (0%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           LC       +       TL+    +    +    L+  +   G  P   T+ +LI     
Sbjct: 43  LCTTPSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTN 102

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
               +   ++L+   ++G  PDT  YN  L        +   E +  +M   G+  D+ +
Sbjct: 103 FHEIENLLKILEN--ELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVST 160

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           F+ LI    +  QL  A++   EM + GL PD + +T ++ G+   G +  ALKM+ +ML
Sbjct: 161 FNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQML 220

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             GC++  V+   ++NG C+   + EA     E+ E G  PD  TF +L++G C+ GN+N
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN 280

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            AL++ D M +K   PD+ TYN+LI G CK+GE EKA ++   MI R+ SPN ++Y  LI
Sbjct: 281 DALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLI 340

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +  C    +  A  L   +V KG+ P + + NT+I+G C S +   A E   +M ++G  
Sbjct: 341 SALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCK 400

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD  +Y+ LI+    E  + +A  L+ +ME+ G   + + YN ++ G C+  R+ D+E I
Sbjct: 401 PDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEI 460

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +M   G++    TY TLI+G      ++EA +  D+M+  G  PD
Sbjct: 461 FDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPD 507



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/458 (33%), Positives = 239/458 (52%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G  PDT  YN  +NA   +  L+    L + M  +G+   V T+N LI  LCK  +   A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             +L+EM   GL PD  T+ TL+     + +++ A ++  +M   G     VS   L+  
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F + G+++ AL +  E+   G  PD V +  ++NG+CR G V +AL + D M+EKG   D
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           V TYN++++G+C+     +A ++  +M+ R   P+  T+ TLI   CK+  +  A +L  
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           I+  K + PD+ T+NTLI G C     + A +++ +M ++   P+  +Y ILI+  C   
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYER 417

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA  L  EM   G     V  NT+I G C+S     A+E   +M   GV   S++YN
Sbjct: 418 RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYN 477

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI+G  + + +++A  L+ +M  +GL PD  TYN +LT FCR G +  +  I+  M   
Sbjct: 478 TLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASN 537

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           G  PD  TY TLI G      +  A +    +  +G V
Sbjct: 538 GCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIV 575



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 174/346 (50%), Gaps = 2/346 (0%)

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+   +++   D      +++KS+G +P+   +  +I  +     +   LK+ +   E 
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--EL 117

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   D   YN  LN L     L   + L ++M+  G+  D  TF  LI   CK   +  A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + + + M    +KPD +T+ TL+ GF + G++  A K+   M+        +S  +L+NG
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C  G V EA R   E+  +G  P  V+ N+++ G+CR G+ + A + +  M+ +G DPD
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN+LI+G  +    +KA  ++ +M  +   P+ +TYN +++  C++  +  +  +  
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            ++ KGL PD  T+ TLI G     N   A    +EM  +G  PD+
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDE 403


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  277 bits (708), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 252/484 (52%), Gaps = 8/484 (1%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           ALC+  +   A   L  M + G  PD V Y T+I+A   +G + EA  L++ M   G   
Sbjct: 189 ALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAA 248

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V T+N ++ GLC  G    A  ++D M+  G +P   TY  LL   CR     EA  + 
Sbjct: 249 DVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML 308

Query: 124 CEMSRRGVAPDI--VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
                 G  P++  V  +T+I      G+L RA   +  M S G  PD   Y I+++G C
Sbjct: 309 ------GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G    A++M DEM EKGC  ++VTY+T+L+  CR  M  +A  + ++M  +G   +  
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  +I+   KDG +++A+ L   M  +  KPDI TYNT+I   C   +M++A  ++ ++
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +   +  N I+Y  LI+     G   E  RL  EMV  G    +VS N +IK  C+ G+ 
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNV 542

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            ++   L +M+++G+ P++ SYN LIN   +   +  A  L  +M NQGL PD++TYN +
Sbjct: 543 DRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 602

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + G C+ G  H +  +L ++  + ++PD  TY  LI+ H     L +A    D+ +  G 
Sbjct: 603 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGI 662

Query: 482 VPDD 485
           VP++
Sbjct: 663 VPNE 666



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 222/428 (51%), Gaps = 4/428 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC    +  A   +  M   G  P  VTY  L+   CR    +EA+    +M G+ 
Sbjct: 256 VVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY----AMLGRV 311

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  V   N++I G   +G+  RA E+ + M   G  PD  TYN L+   C+      A 
Sbjct: 312 PEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAV 371

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G AP+IV++STL+  F RNG  D A     +M + G   ++  Y  II   
Sbjct: 372 RMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYAL 431

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G + EA+++  EM  +GC  D+ TYNTI+  LC    + EA+ +F  +LE GV  + 
Sbjct: 432 GKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANG 491

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIH     G   + L L + M       D+V+YN LI   CK G ++++  L  +
Sbjct: 492 ITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEE 551

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+++ I PN  SY +LIN  C  G V +A  L  EM+ +G+ P +V+ NT+I G C+ G 
Sbjct: 552 MMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 611

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   L K+ +E V PD ++YN LI+   +   +D A  L+ K  + G+VP+  T+ +
Sbjct: 612 THAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGM 671

Query: 421 ILTGFCRQ 428
           ++  F RQ
Sbjct: 672 MVQNFVRQ 679



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 204/399 (51%), Gaps = 5/399 (1%)

Query: 83  RAKEVLDEM-LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           RA  +LD+M  +  ++P   +YN +L    R +  ++A  ++  M R  V P   +F   
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
                R G+   AL   R M   G VPD VLY  +I+     G V EA  + DEML  GC
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             DV T+N ++ GLC    + EA  L + M+  G  P   T+  L+ G C+    ++A  
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY- 305

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
               M  +  + ++V  NT+I G    G++ +A +L+  M S+   P+  +Y IL++G C
Sbjct: 306 ---AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
            +G    A R+  EM  KG  P +V+ +T++  +CR+G    A   L +M ++G   +S 
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            YN +I    ++  +D+A  LV +M++QG  PD+ TYN I+   C   +M ++E I   +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +E+G+  +  TY TLI+  +     +E  R  +EM+  G
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG 521


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 270/511 (52%), Gaps = 27/511 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +  K+ ++D       +M   GV P+T T+N LI   C  G L++A +L + M  KG
Sbjct: 27  LLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKG 86

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P  +++  L+ G C+ G   +  E+L EM ++G SP+   YNTL+   C++    +AE
Sbjct: 87  CEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAE 146

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV----PDNVLYTII 176
           ++  EM + G++PD+V+F+  I     +G++  A   FR+M+   ++    P+ + Y ++
Sbjct: 147 KLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLM 206

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           + G+C+ G + EA  + ++M     +M+  +YN  L GL R   L EA  +  EM++ G+
Sbjct: 207 LGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGM 266

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+ Y++  ++ G CK+G +  A  L  +MT   + PD VTY TL+ G+C  G++ +AN 
Sbjct: 267 EPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANN 326

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +  +M+    SPN  +  IL+      G ++EA  L  +M  KG     V+CN +I G C
Sbjct: 327 VLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLC 386

Query: 357 RSGDASKADEFLSKMVSEG--------------VD---------PDSISYNTLINGFVRE 393
            +G   KA E ++ M + G              VD         PD ISY+T+I+G  + 
Sbjct: 387 NNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKA 446

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             + +A     +M  + L PD   Y+V +  FC++G++  +  +L  M +KG N    TY
Sbjct: 447 GRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTY 506

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +LI G  S+N + E +   DEM +RG  PD
Sbjct: 507 NSLIMGLGSKNQIFEIYGLIDEMRERGVSPD 537



 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 155/519 (29%), Positives = 259/519 (49%), Gaps = 62/519 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC    +D A+    +M +KG  P+  ++  L+  YCR GF  +  +L+  M   G
Sbjct: 62  LIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLG 121

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    YN+LI+  CK+G+ D A++++DEM + GLSPD  T+N  +   C    + EA 
Sbjct: 122 FSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEAS 181

Query: 121 EIFCEMSRRGV----APDIVSFSTLIGIFSRNGQLDRALMYFREMKSA------------ 164
            IF +M    V     P+I++++ ++G F + G L+ A   F +MK +            
Sbjct: 182 RIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIW 241

Query: 165 -----------------------GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
                                  G+ P+   Y I+++G C+NG + +A  +   M   G 
Sbjct: 242 LLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGV 301

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + D VTY T+L+G C    ++EA+++  EM+  G  P+ YT   L++   K+G +++A  
Sbjct: 302 LPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEE 361

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA----NKLWA------------------ 299
           L   M +K    D VT N +IDG C  G+++KA    N +W                   
Sbjct: 362 LLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVD 421

Query: 300 DMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           D  SRK   P+ ISY  +I+G C  G V EA + + EM+GK ++P     +  I  +C+ 
Sbjct: 422 DSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKE 481

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  S A   L  M  +G +    +YN+LI G   +  + + + L+ +M  +G+ PDV  Y
Sbjct: 482 GKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIY 541

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           N +L+  C  GR+ D+  +L  M++KG++P+ S+++ LI
Sbjct: 542 NNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILI 580



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 238/454 (52%), Gaps = 27/454 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           ++++ CK+ K D A+  + EM + G+ PD VT+N  I+A C  G + EA ++   M    
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191

Query: 60  --GL-KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
             GL +P + TYN ++ G CK+G  + A+ + ++M       +  +YN  L+   R   +
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKL 251

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            EA+ +  EM   G+ P++ S++ ++    +NG L  A M  R M S+G++PD V YT +
Sbjct: 252 LEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTL 311

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++GYC  G V EA  +  EM+  GC  +  T N +L  L +   ++EA++L  +M E+G 
Sbjct: 312 LHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGY 371

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIM-----------------------TQKSIKP 273
             D  T   +I G C +G ++KA+ + + M                       ++K   P
Sbjct: 372 VIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMP 431

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D+++Y+T+I G CK G + +A K + +M+ + + P+   Y + I+ +C  G ++ AFR+ 
Sbjct: 432 DLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVL 491

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            +M  KG   TL + N++I G        +    + +M   GV PD   YN +++     
Sbjct: 492 KDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEG 551

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +  A +++ +M  +G+ P++ ++++++  FC+
Sbjct: 552 GRVKDAPSVLDEMLQKGISPNISSFSILIKAFCK 585



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 233/480 (48%), Gaps = 62/480 (12%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P ++ YN L+    K+GR D    +  +M+  G+SP+T T+N L+   C    + +A E+
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           F +M  +G  P+  SF  L+  + R G   + L    EM+  G  P+ V+Y  +I+ +C+
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF----P 238
            G   +A K+ DEM + G   DVVT+N  ++ LC +  + EA  +F +M    V     P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFD-------IMTQKS--------------------- 270
           +  T+  ++ G CK+G + +A  LF+       +M ++S                     
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 271 -------IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
                  ++P++ +YN ++DG CK G +  A  L   M S  + P+ ++Y  L++GYC  
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G V+EA  +  EM+  G  P   +CN ++    + G  S+A+E L KM  +G   D+++ 
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 384 NTLINGFVREENMDKAFALVSKMENQG-----------------------LVPDVITYNV 420
           N +I+G      +DKA  +V+ M   G                        +PD+I+Y+ 
Sbjct: 379 NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYST 438

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I++G C+ GR+ +++     M+ K L PD + Y   I+    +  +  AFR   +M ++G
Sbjct: 439 IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKG 498



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 242/538 (44%), Gaps = 96/538 (17%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVY----PDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++ALC   K+  A     +M+   V     P+ +TYN ++  +C+EG LEEA  L   M 
Sbjct: 168 ISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMK 227

Query: 58  ---------------------GK--------------GLKPGVFTYNSLINGLCKKGRCD 82
                                GK              G++P V++YN +++GLCK G   
Sbjct: 228 VSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLF 287

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A+ ++  M   G+ PDT TY TLL   C    +SEA  +  EM R G +P+  + + L+
Sbjct: 288 DARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILL 347

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG-- 200
               + G++  A    ++M   G V D V   I+I+G C NG + +A+++ + M   G  
Sbjct: 348 YSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSA 407

Query: 201 ---------------------CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
                                C+ D+++Y+TI++GLC+A  + EA   F EM+ + + PD
Sbjct: 408 ALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPD 467

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +   IH  CK+G ++ A  +   M +K     + TYN+LI G     ++ +   L  
Sbjct: 468 SAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLID 527

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS- 358
           +M  R +SP+   Y  +++  C  G V +A  +  EM+ KGI P + S + +IK +C++ 
Sbjct: 528 EMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKAC 587

Query: 359 ---------------------------------GDASKADEFLSKMVSEGVDPDSISYNT 385
                                            G+  KA E     +    D  +  Y  
Sbjct: 588 DFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKD 647

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           LI+   ++E +D A  ++ K+ ++G   D  ++  ++ G  ++G  H+++ +  +M+E
Sbjct: 648 LIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/455 (32%), Positives = 246/455 (54%), Gaps = 12/455 (2%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P   TY  LI   CR G L+  F  + ++  KG +    T+  L+ GLC   R   A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 86  E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR---GVAPDIVSFSTL 141
           + VL  M ++G  PD  +YN LL   C +    EA E+   M+     G  PD+VS++T+
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 142 IGIFSRNG--------QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           +  F + G         +D+A+     M   G++PD + Y  I++GYC +G   EA+   
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
            +M   G   +VVTY++++N LC+    TEA  +F+ M +RG+ PD  T+ TL+ GHCK+
Sbjct: 268 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKE 327

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G + ++  LFD+M +  +KPDI+TYNTLIDG C  G+M++A KL A M+S  + P+ ++Y
Sbjct: 328 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 387

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
           G LINGYC +  + +A  L+ EMV  G+ P +++ N I++G   +   + A E    +  
Sbjct: 388 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 447

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G   +  +YN +++G  +    D+A  +   +    L  +  T+N+++    + GRM +
Sbjct: 448 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDE 507

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           ++ +       GL PD  TY+ +    + Q +L+E
Sbjct: 508 AKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE 542



 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 246/481 (51%), Gaps = 12/481 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++   C+  ++D     L  + +KG   D +T+  L+   C +    +A  + +  M+  
Sbjct: 98  LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ---MGLSPDTATYNTLL--------V 108
           G  P VF+YN+L+ GLC + R   A E+L  M      G  PD  +YNT+L         
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQ 217

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
                + M +A E+   M + GV PD +++++++  +  +GQ   A+   ++M+S G+ P
Sbjct: 218 TKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 277

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y+ ++N  C+NG   EA K+ D M ++G   D+ TY T+L G C+   + E++ LF
Sbjct: 278 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF 337

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
           + M+  GV PD  T+ TLI G C  G M++A  L   M    +KPDIVTY TLI+G+C+V
Sbjct: 338 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 397

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
             M+ A  L+ +M+S  +SPN I+Y I++ G         A  L+  +   G +  L + 
Sbjct: 398 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 457

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N I+ G C++    +A      +    +  ++ ++N +I   ++   MD+A  L +    
Sbjct: 458 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 517

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            GLVPDV TY+++      QG + + + +   M E G + D     +++   + + ++  
Sbjct: 518 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITR 577

Query: 469 A 469
           A
Sbjct: 578 A 578



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 234/469 (49%), Gaps = 12/469 (2%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC D +  D+  + L  M + G  PD  +YN L+   C E   +EA +L++ M+  
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 58  -GKGLKPGVFTYNSLINGLCKKG--------RCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
            G G  P V +YN+++NG  K+G          D+A EVL+ M++ G+ PD  TYN++L 
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 252

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
             C      EA     +M   GV P++V++S+L+    +NG+   A   F  M   GL P
Sbjct: 253 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 312

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           D   Y  ++ G+C+ G V+E+ K+ D M+  G   D++TYNT+++G C A  + EA  L 
Sbjct: 313 DIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 372

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
             M+  GV PD  T+ TLI+G+C+   M+ AL LF  M    + P+I+TYN ++ G    
Sbjct: 373 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
                A +L+  +          +Y I+++G C      EA R++  +    ++    + 
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 492

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I    + G   +A +  +   + G+ PD  +Y+ +    + + ++++   L   ME 
Sbjct: 493 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 552

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            G   D    N I+    ++G +  +   L+ + EK  + + ST + L+
Sbjct: 553 NGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 601



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 213/438 (48%), Gaps = 48/438 (10%)

Query: 49  AFQLMNSMSGKG---LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           A    N M+  G   + P V TY  LI   C+ GR D     L  +++ G   D  T+  
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           LL   C  +  S+A +I                                    R M   G
Sbjct: 133 LLKGLCADKRTSDAMDIV----------------------------------LRRMTELG 158

Query: 166 LVPDNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR----- 217
            +PD   Y  ++ G C   R+   LE L M  +    G   DVV+YNT+LNG  +     
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQT 218

Query: 218 ---AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
              A+ + +A ++ N M++ GV PD  T+ +++HG+C  G   +A+     M    ++P+
Sbjct: 219 KLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 278

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
           +VTY++L++  CK G   +A K++  M  R + P+  +Y  L+ G+C  G V E+ +L+ 
Sbjct: 279 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFD 338

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
            MV  G+KP +++ NT+I G C +G   +A + L+ MVS GV PD ++Y TLING+ R  
Sbjct: 339 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 398

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            MD A AL  +M + G+ P++ITYN+IL G     R   ++ +   + + G   + STY 
Sbjct: 399 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 458

Query: 455 TLINGHVSQNNLKEAFRF 472
            +++G    N   EA R 
Sbjct: 459 IILHGLCKNNLTDEALRM 476



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 140/283 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK+ ++  ++     M + GV PD +TYNTLI+  C  G ++EA +L+ SM   G
Sbjct: 320 LLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 379

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP + TY +LING C+  R D A  +  EM+  G+SP+  TYN +L         + A+
Sbjct: 380 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 439

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++  +++ G   ++ +++ ++    +N   D AL  F+ +    L  +   + I+I   
Sbjct: 440 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 499

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA  +       G V DV TY+ +   L     L E DDLF  M E G   D 
Sbjct: 500 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 559

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
               +++    + G++ +A     ++ +K    +  T + L++
Sbjct: 560 RMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 602



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 134/279 (48%), Gaps = 16/279 (5%)

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS---IKPDIVTYN 279
           +A  +F+E+L RG     Y     +    +      A++ ++ M +     + P + TY 
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL-WYEMVG 338
            LI   C+ G ++       +++ +    + I++  L+ G C+    ++A  +    M  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE---GVDPDSISYNTLINGFVRE-- 393
            G  P + S N ++KG C    + +A E L  M  +   G  PD +SYNT++NGF +E  
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGI 216

Query: 394 ------ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
                 + MDKA  +++ M   G++PD +TYN IL G+C  G+  ++   L +M   G+ 
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 276

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P+  TY++L+N         EA +  D M +RG  PD A
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 48/110 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ AL K  ++D AK         G+ PD  TY+ +      +G LEE   L  SM   G
Sbjct: 495 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 554

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES 110
                   NS++  L ++G   RA   L  + +   S + +T + LL  S
Sbjct: 555 CSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESS 604


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 274/487 (56%), Gaps = 2/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK++ + SA +   +ME++G  P++VT++ LI  + + G +E+A +    M   G
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P VF  +++I G  K  + + A ++ DE  + GL+ +    NT+L   C++    EA 
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEAT 463

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M  RG+ P++VS++ ++    R   +D A + F  +   GL P+N  Y+I+I+G 
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVFPD 239
            RN     AL++ + M      ++ V Y TI+NGLC+    ++A +L   M+E + +   
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++ ++I G  K+G M+ A+  ++ M    I P+++TY +L++G CK   M++A ++  
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M ++ +  +  +YG LI+G+C   ++  A  L+ E++ +G+ P+    N++I G+   G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +   A +   KM+ +G+  D  +Y TLI+G +++ N+  A  L ++M+  GLVPD I Y 
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           VI+ G  ++G+      +   M +  + P+   Y  +I GH  + NL EAFR HDEML +
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823

Query: 480 GFVPDDA 486
           G +PD A
Sbjct: 824 GILPDGA 830



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 164/522 (31%), Positives = 268/522 (51%), Gaps = 38/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  ++ K   A   L    ++G  PD++ Y+  + A C+   L  A  L+  M  K 
Sbjct: 239 LMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK 298

Query: 61  L-KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           L  P   TY S+I    K+G  D A  + DEML  G+S +     +L+   C+  ++  A
Sbjct: 299 LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSA 358

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F +M + G +P+ V+FS LI  F +NG++++AL ++++M+  GL P       II G
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG 418

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + +     EALK+ DE  E G + +V   NTIL+ LC+     EA +L ++M  RG+ P+
Sbjct: 419 WLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID---------------- 283
             ++  ++ GHC+  NM+ A  +F  + +K +KP+  TY+ LID                
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537

Query: 284 -------------------GFCKVGEMEKANKLWADMISRK-ISPNYISYGILINGYCSM 323
                              G CKVG+  KA +L A+MI  K +  + +SY  +I+G+   
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G +  A   + EM G GI P +++  +++ G C++    +A E   +M ++GV  D  +Y
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
             LI+GF +  NM+ A AL S++  +GL P    YN +++GF   G M  +  +  +M++
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            GL  D  TYTTLI+G +   NL  A   + EM   G VPD+
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 247/544 (45%), Gaps = 78/544 (14%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +DSAK F  E+  +        +N L+NAY ++   + A  ++N M    + P     N 
Sbjct: 151 VDSAKSFGFEVNSRA-------FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNR 203

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
            ++ L ++     AKE+   M+ +G+  D  T   L+  S R+E  +EA E+      RG
Sbjct: 204 TLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERG 263

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL-VPDNVLYTIIINGYCRNGFVLEA 189
             PD + +S  +    +   L  A    REMK   L VP    YT +I    + G + +A
Sbjct: 264 AEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDA 323

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           ++++DEML  G  M+VV   +++ G C+   L  A  LF++M + G  P+  TF+ LI  
Sbjct: 324 IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEW 383

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF------------------------ 285
             K+G M KAL  +  M    + P +   +T+I G+                        
Sbjct: 384 FRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV 443

Query: 286 ----------CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
                     CK G+ ++A +L + M SR I PN +SY  ++ G+C   ++  A  ++  
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503

Query: 336 MVGKGIKPT--------------------------LVSCN---------TIIKGYCRSGD 360
           ++ KG+KP                           + S N         TII G C+ G 
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563

Query: 361 ASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            SKA E L+ M+ E  +    +SYN++I+GF +E  MD A A   +M   G+ P+VITY 
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+  RM  +  +   M  KG+  D   Y  LI+G   ++N++ A     E+L+ 
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683

Query: 480 GFVP 483
           G  P
Sbjct: 684 GLNP 687



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 209/410 (50%), Gaps = 2/410 (0%)

Query: 51  QLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES 110
           +L++S    G +     +N L+N   K  + D A +++++ML++ + P     N  L   
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
            ++ +++EA+E++  M   GV  D V+   L+    R  +   AL         G  PD+
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGLCRAKMLTEADDLFN 229
           +LY++ +   C+   +  A  +  EM EK  CV    TY +++    +   + +A  L +
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
           EML  G+  +    T+LI GHCK+ ++  AL LFD M ++   P+ VT++ LI+ F K G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           EMEKA + +  M    ++P+      +I G+       EA +L+ E    G+    V CN
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFV-CN 447

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           TI+   C+ G   +A E LSKM S G+ P+ +SYN ++ G  R++NMD A  + S +  +
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           GL P+  TY++++ G  R     ++  ++  M    +  +   Y T+ING
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 158/293 (53%), Gaps = 3/293 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEM-EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++N LCK  +   A+  L  M E+K +    ++YN++I+ + +EG ++ A      M G 
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P V TY SL+NGLCK  R D+A E+ DEM   G+  D   Y  L+   C++ NM  A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F E+   G+ P    +++LI  F   G +  AL  +++M   GL  D   YT +I+G
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++G ++ A ++  EM   G V D + Y  I+NGL +     +   +F EM +  V P+
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 793

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
              +  +I GH ++GN+++A  L D M  K I PD  T++ L+ G  +VG ++
Sbjct: 794 VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGNLQ 844


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 269/496 (54%), Gaps = 15/496 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+ ++++ A+  L  M++ G  PD   YN LI+ Y +     +AF+ +  M    
Sbjct: 48  LLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH 107

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY ++++GLCK  R   A ++LDEM   G SP+  TYN ++   C +  + EA+
Sbjct: 108 CLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAK 167

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM+ RG  PD+V++++ I    +  ++D A  +   M    + PD V YT +ING 
Sbjct: 168 KMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGL 224

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  A +M D M  +GC  DVVTY+++++G C+   +  A  L + ML+ G  P+ 
Sbjct: 225 CKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 284

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + +L+    + G++ KA ++   M ++   PD+V+YN  IDG CK   ++KA  ++  
Sbjct: 285 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 344

Query: 301 MISRKISPNYISYGILI----------NGYCSMGHVTEAFRLWYEMVGKGI-KPTLVSCN 349
           M+ R  +PN  SY +LI          +G C  G   EA  L+ +++ + I +P +   N
Sbjct: 345 MVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 404

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            ++  +C+     KA +   +M+ +    + +++N L++G   ++ +  A  ++  M ++
Sbjct: 405 VMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDE 463

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G +PD +TY  ++   C+ G+   +  +    ++ G  PD  TY+ LI G V +N  +EA
Sbjct: 464 GFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA 523

Query: 470 FRFHDEMLQRGFVPDD 485
           +    ++++R +VPDD
Sbjct: 524 YLLFTKLVERRWVPDD 539



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 245/467 (52%), Gaps = 15/467 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K      A  FL EM +    P  VTY  +++  C+     +A +L++ M  KG
Sbjct: 83  LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKG 142

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P ++TYN ++ GLC++ + D AK++L+EM   G  PD  TYN+ +   C+ + + EA 
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR 202

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +    ++R  V PD+VS++T+I    ++G LD A      M + G  PD V Y+ +I+G+
Sbjct: 203 KF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGF 259

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  A+ + D ML+ GC  ++V YN++L  L R   + +A+D+  EM  RG  PD 
Sbjct: 260 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 319

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP----------DIVTYNTLIDGFCKVGE 290
            ++   I G CK   + KA  +FD M ++   P          DI+ Y  L+DG CK G 
Sbjct: 320 VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGR 379

Query: 291 MEKANKLWADMISRKI-SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            ++A  L++ ++  KI  P+   Y ++++ +C    + +A ++  +M+ K     +V+ N
Sbjct: 380 FDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWN 438

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            ++ G C     S A+  L  MV EG  PD ++Y TL++   +      A  L  +    
Sbjct: 439 ILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKG 498

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           G VPDV+TY+ ++TG   +    ++ L+  +++E+   PD  T   L
Sbjct: 499 GCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 137/431 (31%), Positives = 229/431 (53%), Gaps = 14/431 (3%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +  VFTYN L+  L ++ R D+A  V  EM+     PD  T+  LL   CR   + +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++   M   G  PD   ++ LI  +S+     +A  +  EM     +P  V YT I++G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+     +A+K+ DEM +KGC  ++ TYN I+ GLC  + L EA  +  EM  RG FPD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ + I G CK   +++A      + +  + PD+V+Y T+I+G CK G+++ A+++  
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M +R  +P+ ++Y  LI+G+C  G V  A  L   M+  G +P +V+ N+++    R G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP------ 413
              KA++ L +M   G  PD +SYN  I+G  + E + KA A+  +M  +G  P      
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 414 ----DVITYNVILTGFCRQGRMHDSELILWRMI-EKGLNPDRSTYTTLINGHVSQNNLKE 468
               D++ Y V+L G C+ GR  ++  +  +++ EK   PD   Y  +++ H  +  + +
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 418

Query: 469 AFRFHDEMLQR 479
           A + H +ML++
Sbjct: 419 ALQIHKQMLEK 429



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 248/505 (49%), Gaps = 48/505 (9%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G   +  TYN L+    RE   ++A  +   M  K  +P  FT+  L+ GLC+  + ++A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           +++L  M +MG  PD A YN L+    + ++  +A +   EM +    P +V+++ ++  
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             +  +   A+    EM+  G  P+   Y +I+ G C    + EA KM +EM  +G   D
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VVTYN+ + GLC+   + EA      M    V PD  ++TT+I+G CK G+++ A  + D
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M+ +   PD+VTY++LIDGFCK GE+E+A  L   M+     PN ++Y  L+     +G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           H+ +A  +  EM  +G  P +VS N  I G C++    KA     +MV  G  P++ SY+
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 385 TLI----------NGFVREENMDKAFALVSKMENQGLV-PD------------------- 414
            LI          +G  +    D+A AL SK+ ++ +  PD                   
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 418

Query: 415 ---------------VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
                          V+T+N+++ G C   R+ D+E +L  M+++G  PD  TY TL++ 
Sbjct: 419 ALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 478

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
                    A    +E ++ G VPD
Sbjct: 479 MCKCGKSAAALELFEEAVKGGCVPD 503



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 217/404 (53%), Gaps = 13/404 (3%)

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           MG   +  TYN LL++  R+    +A  +F EM  +   PD  +F+ L+    R+ QL++
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A      MK  G VPD+ +Y  +I+GY +     +A K   EM++  C+  VVTY  I++
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLC+A+   +A  L +EM ++G  P+ YT+  ++ G C++  +++A  + + M  +   P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D+VTYN+ I G CK   +++A K  A M    ++P+ +SY  +ING C  G +  A R+ 
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
             M  +G  P +V+ +++I G+C+ G+  +A   L  M+  G  P+ ++YN+L+    R 
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST- 452
            ++ KA  ++ +ME +G  PDV++YN  + G C+  R+  ++ +  RM+E+G  P+ S+ 
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 453 ---------YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
                    YT L++G        EA     ++L       D F
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 401


>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
          Length = 807

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 263/477 (55%), Gaps = 2/477 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG-LKPGVFTY 68
           K D A     EME  G+ P   ++  LI+  C++G + EA   +     +G  KP   T+
Sbjct: 194 KADVALAIFKEMESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTF 253

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N+L++ LC  G    AK V   ML+ GL+P   TY+T++   C+  +++EA +IF  ++ 
Sbjct: 254 NTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTE 313

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G+  DIV+ ++LI  F  +G           M+  G+ PD V YTI+I G+C  G V E
Sbjct: 314 EGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEE 373

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
            +++R ++L +G  +++VTY+ ++N L +  +  E ++LF E+   G+  D   ++ LIH
Sbjct: 374 GMRIRKDILGQGIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIH 433

Query: 249 GHCKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           G CK G + +AL ++++M   + + P  V + +++ G CK G +++A      + S+   
Sbjct: 434 GFCKLGEIGRALQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQP 493

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            + + Y ++I+GY  +G +  A +L+  ++  G+ PT+V+CN+++ GYC+ GD   A+ +
Sbjct: 494 SDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESY 553

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
              +    + P +++Y TL++       +    ++  +M  +G+ P+ ITY+V++ G C+
Sbjct: 554 FMAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCK 613

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Q   HD++ +L  M  +G + D   Y TLI G     + K AF  ++ M+ RG +P 
Sbjct: 614 QLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVYELMVCRGVMPS 670



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 243/520 (46%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC    I  AK   C M + G+ P   TY+T+I+  C+ G + EAF +  S++ +G
Sbjct: 256 LMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEG 315

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC--------- 111
           ++  + T NSLING    G      ++++ M  +G+ PD  TY  L+   C         
Sbjct: 316 MELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGM 375

Query: 112 --RKENMS------------------------EAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
             RK+ +                         E E +F E+   G+  D++++S LI  F
Sbjct: 376 RIRKDILGQGIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGF 435

Query: 146 SRNGQLDRALMYFREMK-SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
            + G++ RAL  +  M  S  ++P +V +  I+ G C+ GF+ EA    + +  K    D
Sbjct: 436 CKLGEIGRALQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQPSD 495

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VV YN +++G  +   +  A  L++ ++  G+ P   T  +L++G+CK G+++ A + F 
Sbjct: 496 VVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFM 555

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            +    + P  VTY TL+D   + G++     ++ +M  + I PN I+Y ++I G C   
Sbjct: 556 AIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQL 615

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
              +A  +  +M  +G     +  NT+I+G+C + DA  A      MV  GV P  ++YN
Sbjct: 616 MFHDAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVYELMVCRGVMPSPVTYN 675

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L+N    +  +  A   +     QG       Y  ++   C +G  + + + + ++++ 
Sbjct: 676 LLVNVLCLKGLVIHAEMKLESFRKQGAELRKFAYTTLIKAQCAKGMPYKAIMWVGKLLDA 735

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G       ++  IN    +   +EA      ML  G  PD
Sbjct: 736 GFEASIEDFSAAINRLCKRQFTREALMLISIMLSVGVYPD 775



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 210/438 (47%), Gaps = 3/438 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   GV PD VTY  LI  +C  G +EE  ++   + G+G++  + TY+ LIN L KKG 
Sbjct: 346 MRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVTYSVLINALFKKGL 405

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM--SRRGVAPDIVSF 138
               + +  E+  +GL  D   Y+ L+   C+   +  A +++  M  S+R +   +   
Sbjct: 406 FYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLMCCSQRVIPTSVNHV 465

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           S L+G+  + G LD A  Y   + S     D VLY ++I+GY + G +  A+++ D ++ 
Sbjct: 466 SILLGL-CKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIM 524

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G    +VT N++L G C+   L  A+  F  +    + P   T+TTL+    + G ++ 
Sbjct: 525 AGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALSEAGKVHS 584

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
            L++F  MT K I+P+ +TY+ +I G CK      A  +  DM       + I Y  LI 
Sbjct: 585 MLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQ 644

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G+C       AF ++  MV +G+ P+ V+ N ++   C  G    A+  L     +G + 
Sbjct: 645 GFCETQDAKNAFYVYELMVCRGVMPSPVTYNLLVNVLCLKGLVIHAEMKLESFRKQGAEL 704

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
              +Y TLI     +    KA   V K+ + G    +  ++  +   C++    ++ +++
Sbjct: 705 RKFAYTTLIKAQCAKGMPYKAIMWVGKLLDAGFEASIEDFSAAINRLCKRQFTREALMLI 764

Query: 439 WRMIEKGLNPDRSTYTTL 456
             M+  G+ PD   Y  L
Sbjct: 765 SIMLSVGVYPDIQLYRVL 782



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 209/387 (54%), Gaps = 5/387 (1%)

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
            +  ++ L     R +   +A  +  +M+   +   I ++ +L+    +    D AL  F
Sbjct: 146 SSIVWDALANSYARAQMNHDALYVLSKMNSLNMQISITTYDSLLYSLRKA---DVALAIF 202

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV-VTYNTILNGLCR 217
           +EM+S G+ P +  + I+I+G C+ G + EAL    E  ++G    + +T+NT+++ LC 
Sbjct: 203 KEMESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCN 262

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              + +A  +F  ML+ G+ P  +T++T+IHG CK G++N+A ++F  +T++ ++ DIVT
Sbjct: 263 WGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVT 322

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
            N+LI+GF   G   +  K+   M    + P+ ++Y ILI G+C  G V E  R+  +++
Sbjct: 323 CNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDIL 382

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
           G+GI+  +V+ + +I    + G   + +    ++ S G++ D I+Y+ LI+GF +   + 
Sbjct: 383 GQGIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIG 442

Query: 398 KAFALVSKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           +A  + + M  +Q ++P  + +  IL G C++G + ++   L  +  K    D   Y  +
Sbjct: 443 RALQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVV 502

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVP 483
           I+G+    ++  A + +D ++  G  P
Sbjct: 503 IDGYAKVGDIGNAVQLYDAIIMAGMCP 529



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 115/241 (47%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK   +  A+ +   ++   + P TVTY TL++A    G +     +   M+GKG++P  
Sbjct: 542 CKFGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNA 601

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TY+ +I GLCK+     AK VLD+M + G   D   YNTL+   C  ++   A  ++  
Sbjct: 602 ITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVYEL 661

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  RGV P  V+++ L+ +    G +  A M     +  G       YT +I   C  G 
Sbjct: 662 MVCRGVMPSPVTYNLLVNVLCLKGLVIHAEMKLESFRKQGAELRKFAYTTLIKAQCAKGM 721

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
             +A+    ++L+ G    +  ++  +N LC+ +   EA  L + ML  GV+PD   +  
Sbjct: 722 PYKAIMWVGKLLDAGFEASIEDFSAAINRLCKRQFTREALMLISIMLSVGVYPDIQLYRV 781

Query: 246 L 246
           L
Sbjct: 782 L 782



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 139/313 (44%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            LCK   +D A+ +L  +  K    D V YN +I+ Y + G +  A QL +++   G+ P
Sbjct: 470 GLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCP 529

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + T NSL+ G CK G    A+     +    L P T TY TL+        +     IF
Sbjct: 530 TIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSIF 589

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM+ +G+ P+ +++S +I    +      A     +M   G   D + Y  +I G+C  
Sbjct: 590 KEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFCET 649

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
                A  + + M+ +G +   VTYN ++N LC   ++  A+       ++G     + +
Sbjct: 650 QDAKNAFYVYELMVCRGVMPSPVTYNLLVNVLCLKGLVIHAEMKLESFRKQGAELRKFAY 709

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           TTLI   C  G   KA+     +     +  I  ++  I+  CK     +A  L + M+S
Sbjct: 710 TTLIKAQCAKGMPYKAIMWVGKLLDAGFEASIEDFSAAINRLCKRQFTREALMLISIMLS 769

Query: 304 RKISPNYISYGIL 316
             + P+   Y +L
Sbjct: 770 VGVYPDIQLYRVL 782



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 68/176 (38%)

Query: 377 DPDSISYNTLINGFVREE---------------NM-----------------DKAFALVS 404
           D  SI ++ L N + R +               NM                 D A A+  
Sbjct: 144 DSSSIVWDALANSYARAQMNHDALYVLSKMNSLNMQISITTYDSLLYSLRKADVALAIFK 203

Query: 405 KMENQGLVPDVITYNVILTGFCRQGR---------------------------------- 430
           +ME+ G+ P   ++ +++ G C+QG+                                  
Sbjct: 204 EMESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCNW 263

Query: 431 --MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             + D++ +   M++ GLNP R TY+T+I+G     ++ EAF     + + G   D
Sbjct: 264 GFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELD 319


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 155/482 (32%), Positives = 245/482 (50%), Gaps = 1/482 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C+      +   L  M +KG  PD +    LI  +     + +A ++M  +   G +P V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
           F YN+LING CK  R D A  VLD M     SPDT TYN ++   C +  +  A ++  +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           +      P +++++ LI      G +D AL    EM S GL PD   Y  II G C+ G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V  A +M   +  KGC  DV++YN +L  L       E + L  +M      P+  T++ 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI   C+DG + +A+NL  +M +K + PD  +Y+ LI  FC+ G ++ A +    MIS  
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ ++Y  ++   C  G   +A  ++ ++   G  P   S NT+      SGD  +A 
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
             + +MVS G+DPD I+YN++I+   RE  +DKAF L+  M +    P V+TYN++L GF
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGF 514

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C+  R+ D+  +L  M+  G  P+ +TYT LI G        EA    +++++   + + 
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEY 574

Query: 486 AF 487
           +F
Sbjct: 575 SF 576



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 204/372 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ +LC   K+D A   L ++      P  +TY  LI A   EG ++EA +L++ M  +G
Sbjct: 195 MIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG 254

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP +FTYN++I G+CK+G  DRA E++  +   G  PD  +YN LL     +    E E
Sbjct: 255 LKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGE 314

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M      P++V++S LI    R+G+++ A+   + MK  GL PD   Y  +I  +
Sbjct: 315 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 374

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A++  + M+  GC+ D+V YNT+L  LC+     +A ++F ++ E G  P+ 
Sbjct: 375 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 434

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ T+       G+  +AL++   M    I PD +TYN++I   C+ G ++KA +L  D
Sbjct: 435 SSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVD 494

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S +  P+ ++Y I++ G+C    + +A  +   MVG G +P   +   +I+G   +G 
Sbjct: 495 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGY 554

Query: 361 ASKADEFLSKMV 372
            ++A E  + +V
Sbjct: 555 RAEAMELANDLV 566



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 206/407 (50%), Gaps = 4/407 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK ++ID A   L  M  K   PDTVTYN +I + C  G L+ A ++++ +    
Sbjct: 160 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN 219

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY  LI     +G  D A ++LDEML  GL PD  TYNT++   C++  +  A 
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 279

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   +  +G  PD++S++ L+      G+ +       +M S    P+ V Y+I+I   
Sbjct: 280 EMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 339

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G + EA+ +   M EKG   D  +Y+ ++   CR   L  A +    M+  G  PD 
Sbjct: 340 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 399

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T++   CK+G  ++AL +F  + +    P+  +YNT+       G+  +A  +  +
Sbjct: 400 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I P+ I+Y  +I+  C  G V +AF L  +M      P++V+ N ++ G+C++  
Sbjct: 460 MVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 519

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF----VREENMDKAFALV 403
              A + L  MV  G  P+  +Y  LI G      R E M+ A  LV
Sbjct: 520 IEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 190/408 (46%), Gaps = 34/408 (8%)

Query: 110 SCRKENMSEAEEIFCEMSRRGVAPDIV--------------------------------- 136
           SCR  N  E+  +   M R+G  PD++                                 
Sbjct: 95  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDV 154

Query: 137 -SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
            +++ LI  F +  ++D A      M+S    PD V Y I+I   C  G +  ALK+ D+
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           +L   C   V+TY  ++        + EA  L +EML RG+ PD +T+ T+I G CK+G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +++A  +   +  K  +PD+++YN L+      G+ E+  KL   M S K  PN ++Y I
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LI   C  G + EA  L   M  KG+ P   S + +I  +CR G    A EFL  M+S+G
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             PD ++YNT++    +    D+A  +  K+   G  P+  +YN + +     G    + 
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            ++  M+  G++PD  TY ++I+    +  + +AF    +M    F P
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHP 502



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 169/309 (54%), Gaps = 1/309 (0%)

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           I +  CR+G  +E+L + + M+ KG   DV+    ++ G    + + +A  +  E+LE+ 
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKF 149

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             PD + +  LI+G CK   ++ A  + D M  K   PD VTYN +I   C  G+++ A 
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           K+   ++S    P  I+Y ILI      G V EA +L  EM+ +G+KP + + NTII+G 
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+ G   +A E +  +  +G +PD ISYN L+   + +   ++   L++KM ++   P+V
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           +TY++++T  CR G++ ++  +L  M EKGL PD  +Y  LI     +  L  A  F + 
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389

Query: 476 MLQRGFVPD 484
           M+  G +PD
Sbjct: 390 MISDGCLPD 398



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 137/246 (55%), Gaps = 1/246 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+D KI+ A   L  M++KG+ PD  +Y+ LI A+CREG L+ A + + +M   G
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +  YN+++  LCK G+ D+A E+  ++ ++G SP++++YNT+        +   A 
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM   G+ PD ++++++I    R G +D+A     +M+S    P  V Y I++ G+
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGF 514

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A+ + D M+  GC  +  TY  ++ G+  A    EA +L N+++      + 
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISE- 573

Query: 241 YTFTTL 246
           Y+F  L
Sbjct: 574 YSFKRL 579


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 259/456 (56%), Gaps = 16/456 (3%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           +++  + L+ AY + G ++ A +  +     G +    + N ++  L K+GR    + V 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            EM++  +  +  T++ ++   C+     +A ++  +M   G +P +++++T+I  + + 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G++ +A    +EM +  + P+ + + I+I+G+CR+  V  A K+ +EM  +G   +VVTY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N+++NGLC    L EA  L ++M   G+ P+  T+  LI+G CK   + +A  + D + +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           + + P+++T+NTLID + K G M+ A  L + M+   + PN  +Y  LI G+C  G+V E
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A +L  EM G G+K  LV+ N ++   C+ G+  KA   L +M   G++P  ++YN LI+
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALID 517

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ RE N   A  + + ME +G   +++TYNV++ GFC +G++ ++  +L  M+EKGL P
Sbjct: 518 GYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 577

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +R+TY  L                 DEM+++GF+PD
Sbjct: 578 NRTTYDIL----------------RDEMMEKGFIPD 597



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 137/400 (34%), Positives = 238/400 (59%), Gaps = 5/400 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ +L K+ +I   +    EM ++ +  + VT++ +IN  C+ G  ++A  ++  M   G
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN++I+G CK G+  +A  +L EM+   + P+  T+N L+   CR EN++ A+
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM R+G+ P++V++++LI     NG+LD AL    +M   GL P+ V Y  +ING+
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA +M D++ ++G   +V+T+NT+++   +A  + +A  L + ML+ GV P+ 
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G C++GN+ +A  L   M    +K D+VTYN L+D  CK GE  KA +L  +
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    ++P++++Y  LI+GY   G+ T A  +   M  KG +  +V+ N +IKG+C  G 
Sbjct: 500 MFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGK 559

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
             +A+  L++M+ +G+ P+  +Y+ L     R+E M+K F
Sbjct: 560 LEEANRLLNEMLEKGLIPNRTTYDIL-----RDEMMEKGF 594



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/461 (31%), Positives = 249/461 (54%), Gaps = 23/461 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V A  K+ ++D A          G     ++ N ++ +  +EG +     +   M  + 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V T++ +INGLCK G+  +A +V+++M   G SP   TYNT++   C+   M +A+
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  + + P+ ++F+ LI  F R+  +  A   F EM+  GL P+ V Y  +ING 
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C NG + EAL ++D+M   G   +VVTYN ++NG C+ KML EA ++ +++ +RG+ P+ 
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI  + K G M+ A  L  +M    + P++ TYN LI GFC+ G +++A KL  +
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +  + ++Y IL++  C  G   +A RL  EM   G+ P+ ++ N +I GY R G+
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGN 524

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           ++ A    + M  +G   + ++YN LI GF  +  +++A  L+++M  +GL+P+  TY++
Sbjct: 525 STAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI 584

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +                   M+EKG  PD       I+GH+
Sbjct: 585 LRD----------------EMMEKGFIPD-------IDGHL 602



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/135 (20%), Positives = 66/135 (48%)

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++  Y ++G+   A E   +    G    ++S N ++   V+E  +    ++  +M  + 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           +  +V+T++V++ G C+ G+   +  ++  M   G +P   TY T+I+G+     + +A 
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284

Query: 471 RFHDEMLQRGFVPDD 485
               EM+ +   P++
Sbjct: 285 ALLKEMVAKRIHPNE 299


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 239/448 (53%), Gaps = 8/448 (1%)

Query: 35  TLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            LI   C  G   EA +++ S      +P V +YN+++ G C  G+ D A+ ++     M
Sbjct: 95  ALIKKLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVA---AM 146

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
            + PDT TYNTL+   C +     A  +  +M RRG  PD+V+++ L+    +     +A
Sbjct: 147 PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA 206

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
           +    EM+  G  PD V Y +++NG C+ G V +A++    +   GC  + V+YN +L G
Sbjct: 207 VKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKG 266

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           LC A+   +A+ L  EM  +G  P+  TF  LI   C+ G +  A+ + D + +    P+
Sbjct: 267 LCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPN 326

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
            ++YN ++  FCK  +M++A      M+S    P+ +SY  L+   C  G V  A  L +
Sbjct: 327 SLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLH 386

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           ++  KG  P L+S NT+I G  ++G   +A E L++MV++G+ PD I+Y+T+ +G  RE 
Sbjct: 387 QLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREG 446

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            +++A     K+++ G+ P+ + YN IL G C++   H +  +   M+  G  P+ STYT
Sbjct: 447 RIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYT 506

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            LI G   +  +KEA     E+  RG V
Sbjct: 507 ILIEGLAYEGLVKEAREMMAELCSRGVV 534



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 245/446 (54%), Gaps = 8/446 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +   A+  L   E     PD ++YN ++  YC  G L+ A +L+ +M    
Sbjct: 96  LIKKLCASGRTAEARRVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAMP--- 147

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  +TYN+LI GLC +GR D A  VLD+ML+ G  PD  TY  LL  +C++    +A 
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  +G APDIV+++ ++    + G++D A+ + + + S G  P+ V Y I++ G 
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +A K+  EM  KG   +VVT+N +++ LCR  ++  A ++ +++ + G  P+ 
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNS 327

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  ++H  CK   M++A+   ++M      PDIV+YNTL+   C+ GE++ A +L   
Sbjct: 328 LSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  +P  ISY  +I+G    G   EA  L  EMV KG++P +++ +TI  G CR G 
Sbjct: 388 LKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGR 447

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +   K+   G+ P+++ YN ++ G  +      A  L + M + G +P+  TY +
Sbjct: 448 IEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTI 507

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           ++ G   +G + ++  ++  +  +G+
Sbjct: 508 LIEGLAYEGLVKEAREMMAELCSRGV 533


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 259/461 (56%), Gaps = 1/461 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G  P+ VT++TLI+AYC+EG L++AF L + M+G G+ P +  Y+ LI+GL K GR +  
Sbjct: 302 GPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDG 361

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           + +L   L  G+  D   +++ +    +  ++    +I+  M   G++P++VS S LI  
Sbjct: 362 QRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKG 421

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F +NG++  A   F ++   G  P  + Y+ +I G+C++G + +   + ++M++K C  D
Sbjct: 422 FCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPD 481

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            + Y+ ++NGLC+  ++ +A   F + + RG+ P+ +T  TL+   C+   +  A+ ++ 
Sbjct: 482 TIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYY 541

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M   +IK D VTY  LI G  + G +++A  L+  M+ +   P+ I+Y  LI+G C + 
Sbjct: 542 LMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLK 601

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
             +    ++  M    + P +   N +I  + R G    A      +V  G  PD  ++N
Sbjct: 602 KSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFN 661

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           T+I  +   + +D A  L +KM ++ L P+ IT+ +++  FCR+GRM D+ L+  +M+E+
Sbjct: 662 TMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEE 721

Query: 445 GLNPDRSTYTTLINGHV-SQNNLKEAFRFHDEMLQRGFVPD 484
           G  P+  TY+ LI+G+  SQ+ ++   + ++EML+    P+
Sbjct: 722 GPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPN 762



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 245/438 (55%), Gaps = 1/438 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            M  +G+ P+ V+ + LI  +C+ G + EA  L   +   G +P + TY++LI G CK G
Sbjct: 402 RMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSG 461

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
                  + ++M++    PDT  Y+ L+   C++  + +A   F +   RG++P++ + +
Sbjct: 462 NLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLN 521

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  F R   +  A+  +  M    +  D V YTI+I G  + G V EAL +  +ML+K
Sbjct: 522 TLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKK 581

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               DV+TY T+++GLC+ K  +    +F+ M +  V PD   +  LI+ H ++G++  A
Sbjct: 582 DFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAA 641

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L LF  + ++  KPD+ T+NT+I  +C    ++ A +L+A M S ++ PN I++ ILI+ 
Sbjct: 642 LGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDA 701

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD-EFLSKMVSEGVDP 378
           +C  G + +A  ++ +M+ +G +P LV+ + +I GY +S    ++  +  ++M+   + P
Sbjct: 702 FCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAP 761

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           + +SY+ LI+G  +   M +A        ++ L+PDVI Y +++ G+C+ GR+ ++ ++ 
Sbjct: 762 NIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLY 821

Query: 439 WRMIEKGLNPDRSTYTTL 456
             M+   L PDR    TL
Sbjct: 822 DNMLLNRLTPDRFLERTL 839



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 210/422 (49%), Gaps = 36/422 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C++ +I  A     ++ + G  P  +TY+ LI  +C+ G L + F L   M  K 
Sbjct: 418 LIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKR 477

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P    Y+ LINGLCK+G    A     + +  GLSP+  T NTLL   CR + +  A 
Sbjct: 478 CEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAM 537

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM------------------- 161
           +++  M    +  D V+++ LI   ++ G++D ALM F +M                   
Sbjct: 538 KVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGL 597

Query: 162 -----KSAGL-----------VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                 SAGL            PD  +Y ++IN + R G +  AL +   ++E+G   DV
Sbjct: 598 CKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDV 657

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T+NT++   C  K L +A  LF +M    + P+  TFT LI   C++G M+ A+ +F  
Sbjct: 658 FTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSK 717

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEM-EKANKLWADMISRKISPNYISYGILINGYCSMG 324
           M ++  +P++VTY+ LI G+ K   M E   KL+ +M+   I+PN +SY ILI+G C  G
Sbjct: 718 MLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRG 777

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA   +   + K + P +++   +I+GYC+ G  ++A      M+   + PD     
Sbjct: 778 LMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLER 837

Query: 385 TL 386
           TL
Sbjct: 838 TL 839



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 206/422 (48%), Gaps = 39/422 (9%)

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRG--VAPDIVSFSTLIGIFSRNGQLDRALMY 157
           +  Y  L+   CRK    ++ +IF  +  +G  V+P++V    L+G    +  ++  +  
Sbjct: 167 SVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYL--LLGSLIDSHCVEVIVDK 224

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
           + E+ SA       +Y  ++N +   G V   L+    +++ G  +D++T N IL G+  
Sbjct: 225 YGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWM 284

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              +  ADD FN ++  G  P+  TF+TLI  +CK+GN++KA  LFD+M    + PD++ 
Sbjct: 285 QNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIV 344

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           Y+ LIDG  K G +E   +L    + + I  + + +   ++ Y  +G +    +++  M+
Sbjct: 345 YSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRML 404

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            +GI P +VSC+ +IKG+C++G   +A     +++  G +P  ++Y+ LI GF +  N+ 
Sbjct: 405 NEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLR 464

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP--------- 448
             F L   M  +   PD I Y+V++ G C+QG + D+    ++ + +GL+P         
Sbjct: 465 DGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLL 524

Query: 449 --------------------------DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
                                     D  TYT LI G      + EA     +ML++ F 
Sbjct: 525 DSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFK 584

Query: 483 PD 484
           PD
Sbjct: 585 PD 586



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 227/462 (49%), Gaps = 10/462 (2%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGL--KPGV--FTYNSLINGLCKKGRCDRAK 85
           +V Y  LI +YCR+G  +++  +   +  KG+   P V      SLI+  C +   D+  
Sbjct: 167 SVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYG 226

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GI 144
           E+   M +   S     Y  ++     K  +         + + G   DI++ + ++ GI
Sbjct: 227 ELCSAMREQPFS----VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGI 282

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + +N  +  A  YF  +   G  P+ V ++ +I+ YC+ G + +A  + D M   G   D
Sbjct: 283 WMQN-DIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPD 341

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           ++ Y+ +++GL +A  L +   L    L++G+  D   F++ +  + K G++ + + ++ 
Sbjct: 342 LIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYK 401

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  + I P++V+ + LI GFC+ G + +A  L+  ++     P+ ++Y  LI G+C  G
Sbjct: 402 RMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSG 461

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           ++ + F L+ +M+ K  +P  +  + +I G C+ G    A  F  + V+ G+ P+  + N
Sbjct: 462 NLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLN 521

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TL++ F R + +  A  +   M    +  D +TY +++ G  + GR+ ++ ++ ++M++K
Sbjct: 522 TLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKK 581

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              PD  TY TLI+G              D M +    PD A
Sbjct: 582 DFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIA 623


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 156/491 (31%), Positives = 261/491 (53%), Gaps = 28/491 (5%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M Q GV P+T T+N LI + C    L+ A +L + MS KG +P  FT   L+ G C+ G
Sbjct: 141 DMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAG 200

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R  +A E +D   +MG + +   YNTL+   C+++   EAE++   M+ +G+ PD+V+F+
Sbjct: 201 RTKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFN 258

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLV----PDNVLYTIIINGYCRNGFVLEALKMRDE 195
           + I    R G++  A   FR+M+  G +    P+ V + +++ G+C+ G + EA  + + 
Sbjct: 259 SRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVET 318

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M + G  + + +YNT L GL R   L E   + +EM+E G+ P+ Y++  ++ G C++  
Sbjct: 319 MKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHM 378

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           M  A  L D+M    + PD VTY TL+ G+C  G++ +A  +  +MI +   PN  +   
Sbjct: 379 MLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNT 438

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           L+N     G  +EA  +  +M  K  +   V+CN ++ G CR+G+  KA E +S+M ++G
Sbjct: 439 LLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDG 498

Query: 376 VD----------------------PDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
            +                      PD I+Y TLING  +   +++A     +M  + L P
Sbjct: 499 TNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHP 558

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D +TY+  +  FC+QG++  +  +L  M   G +    TY +LI G  S+  + E +   
Sbjct: 559 DSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLM 618

Query: 474 DEMLQRGFVPD 484
           DEM +RG  PD
Sbjct: 619 DEMRERGIHPD 629



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 265/539 (49%), Gaps = 64/539 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+ + +D A+    +M +KG  P+  T   L+  +CR G  ++A + ++   G  
Sbjct: 157 LIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDGKMGGN 216

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V  YN+L++  CK+   D A+++++ M + GL PD  T+N+ +   CR   + EA 
Sbjct: 217 VNRVV--YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEAS 274

Query: 121 EIFCEMSRRG----VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            IF +M   G      P++V+F+ ++  F + G ++ A      MK  G       Y   
Sbjct: 275 RIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTW 334

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           + G  RNG +LE   + DEM+E G   ++ +YN +++GLCR  M+ +A  L + M+  GV
Sbjct: 335 LLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGV 394

Query: 237 FPDFYTFTTLIHGHC-----------------------------------KDGNMNKALN 261
           +PD  T+TTL+HG+C                                   K+G  ++A  
Sbjct: 395 YPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEE 454

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS-------------- 307
           +   M +KS + D VT N +++G C+ GE+EKA+++ ++M +   +              
Sbjct: 455 MLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNS 514

Query: 308 --------PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                   P+ I+Y  LING C +G + EA + + EM+ K + P  V+ +T +  +C+ G
Sbjct: 515 IHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQG 574

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S A   L  M   G      +YN+LI G   +  + + + L+ +M  +G+ PD+ TYN
Sbjct: 575 KISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYN 634

Query: 420 VILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            ++   C  G+  D+  +L  M++KG ++P+ S++  LI       + K A    D  L
Sbjct: 635 NMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVAL 693



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 225/455 (49%), Gaps = 28/455 (6%)

Query: 52  LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC 111
           L   M   G+ P  +T+N LI  LC+    D A+E+ D+M + G  P+  T   L+   C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           R     +A E F +  + G   + V ++TL+  F +    D A      M   GL+PD V
Sbjct: 198 RAGRTKQALE-FVD-GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCV----MDVVTYNTILNGLCRAKMLTEADDL 227
            +   I+  CR G V EA ++  +M   G +     +VVT+N +L G C+  M+ EA  L
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
              M + G F    ++ T + G  ++G + +  ++ D M +  I+P+I +YN ++DG C+
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCR 375

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
              M  A +L   M+S  + P+ ++Y  L++GYCS G V EA  +  EM+ KG  P   +
Sbjct: 376 NHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYT 435

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           CNT++    + G  S+A+E L KM  +    D+++ N ++NG  R   ++KA  +VS+M 
Sbjct: 436 CNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMW 495

Query: 408 NQGL----------------------VPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
             G                       VPDVITY  ++ G C+ G++ +++     M+ K 
Sbjct: 496 TDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKN 555

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           L+PD  TY T +     Q  +  A R   +M + G
Sbjct: 556 LHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNG 590



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 162/565 (28%), Positives = 254/565 (44%), Gaps = 96/565 (16%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V++ CK    D A+  +  M +KG+ PD VT+N+ I+A CR G + EA ++   M   G
Sbjct: 225 LVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDG 284

Query: 61  ----LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
                KP V T+N ++ G C++G  + A+ +++ M + G      +YNT L+   R   +
Sbjct: 285 ELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKL 344

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            E   +  EM   G+ P+I S++ ++    RN  +  A      M S G+ PD V YT +
Sbjct: 345 LEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTL 404

Query: 177 INGYCRNGFVLEALKMRDEMLEKGC----------------------------------- 201
           ++GYC  G V EA  + +EM+ KGC                                   
Sbjct: 405 LHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSY 464

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV----------------------FPD 239
            +D VT N ++NGLCR   L +A ++ +EM   G                        PD
Sbjct: 465 QLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPD 524

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTLI+G CK G + +A   F  M  K++ PD VTY+T +  FCK G++  A ++  
Sbjct: 525 VITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLK 584

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM     S    +Y  LI G  S G + E + L  EM  +GI P + + N +I   C  G
Sbjct: 585 DMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGG 644

Query: 360 DASKADEFLSKMVSEG-VDPDSISYNTLINGFVRE-------ENMDKAF-------ALVS 404
               A   L +M+ +G V P+  S+  LI  F +        E  D A        AL S
Sbjct: 645 KTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYS 704

Query: 405 KMENQ--------------------GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            M N+                     L+     Y  ++   C+ GR+ D+  +L ++I+K
Sbjct: 705 LMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDK 764

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEA 469
           G   D S++  +I+G   + N ++A
Sbjct: 765 GYCFDHSSFIPVIDGLSKRGNKQQA 789



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 211/430 (49%), Gaps = 24/430 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC++H +  A+  +  M   GVYPDTVTY TL++ YC +G + EA  ++N M  KG
Sbjct: 369 VMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKG 428

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +T N+L+N L K+GR   A+E+L +M +     DT T N ++   CR   + +A 
Sbjct: 429 CHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKAS 488

Query: 121 EIFCEMSRRGV----------------------APDIVSFSTLIGIFSRNGQLDRALMYF 158
           E+  EM   G                        PD+++++TLI    + G+L+ A   F
Sbjct: 489 EVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKF 548

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
            EM +  L PD+V Y   +  +C+ G +  AL++  +M   GC   + TYN+++ GL   
Sbjct: 549 IEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSK 608

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI-KPDIVT 277
             + E   L +EM ERG+ PD  T+  +I+  C+ G    A +L   M  K +  P++ +
Sbjct: 609 GQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSS 668

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           +  LI  FCK G+ + A +L+ D+           Y ++ N   + G +++A  L+   +
Sbjct: 669 FKILIKAFCKSGDFKVACELF-DVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASL 727

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            + +         +I   C+ G    A   L K++ +G   D  S+  +I+G  +  N  
Sbjct: 728 ERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQ 787

Query: 398 KAFALVSKME 407
           +A  L   ME
Sbjct: 788 QADELGRIME 797


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 248/468 (52%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            L EME KGV P+  TY T +    R   +  A+  +  +  +G     + +N++I G C
Sbjct: 233 LLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFC 292

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           ++G+   A EV D M + GL PDT +Y+ L+   C++ ++    ++  EM+R G+AP +V
Sbjct: 293 REGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLV 352

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           S+S+L+    R G+++ A   FR ++  G   D+++Y+II+NG C++  +     + ++M
Sbjct: 353 SYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDM 412

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           +    V D   Y +++   CR + LT+A  +F  ML+ GV P+  T T L+ G  K+  +
Sbjct: 413 VHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMI 472

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A      + Q  I P++  Y  +I+G CKV + +    ++ADMI R   P+ + Y I+
Sbjct: 473 DEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSII 532

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+ +     + EAFRL+++M+ +G KP + +  ++I G C      +       M+ EG+
Sbjct: 533 IDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGL 592

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD I Y +LI  + +  NM  A  +   M   GL  D   Y  ++ GF +   M  ++ 
Sbjct: 593 TPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQC 652

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  M  KGL P   TYT LI G+    + ++A   ++ MLQ G  PD
Sbjct: 653 LMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPD 700



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 222/438 (50%), Gaps = 2/438 (0%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK--EVLDEMLQMGLSPDTATYNTL 106
           A  L + M   G  P V++Y+ L++      R   A+  E+L EM   G+ P+ ATY T 
Sbjct: 193 ARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTY 252

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
           L    R   ++ A      + +RG   +   F+ +I  F R GQ+  A+  F  MK  GL
Sbjct: 253 LYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGL 312

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
           VPD   Y+I+++G C+ G VL    +  EM   G    +V+Y+++L+GLCRA  +  A +
Sbjct: 313 VPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFE 372

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           LF  + E+G   D   ++ +++G C+  N+    +L++ M   +  PD   Y +LI  FC
Sbjct: 373 LFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFC 432

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           +   +  A  ++  M+   +SPN ++  IL++G+     + EAF   +++   GI P L 
Sbjct: 433 RHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLC 492

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
               II G C+   +       + M+  G  PD++ Y+ +I+ FV+   + +AF L  KM
Sbjct: 493 MYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKM 552

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
            ++G  P+V TY  ++ G C   R+ +   +   MI +GL PDR  YT+LI  +  ++N+
Sbjct: 553 LDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNM 612

Query: 467 KEAFRFHDEMLQRGFVPD 484
           K A      M + G   D
Sbjct: 613 KAALEIFRGMGKLGLSAD 630



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 208/380 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK   + +    L EM + G+ P  V+Y++L++  CR G +E AF+L   +  +G
Sbjct: 322 LVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQG 381

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K     Y+ ++NG C+    +   ++ ++M+     PD   Y +L+   CR  N+++A 
Sbjct: 382 FKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDAL 441

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M   GV+P++V+ + L+  F +   +D A ++  +++  G+VP+  +Y +IING 
Sbjct: 442 GVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGL 501

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+         +  +M+++G V D V Y+ I++   +A  L EA  LF++ML+ G  P+ 
Sbjct: 502 CKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNV 561

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+T+LI+G C D  + + + LF  M  + + PD + Y +LI  +CK   M+ A +++  
Sbjct: 562 FTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRG 621

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +S +   Y  LI G+  +  +  A  L  EM  KG+ P++V+   +I GY + GD
Sbjct: 622 MGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGD 681

Query: 361 ASKADEFLSKMVSEGVDPDS 380
             KA+   + M+  G+ PD+
Sbjct: 682 ERKANMTYNSMLQAGITPDA 701



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 120/254 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+   K+  ID A +FL ++ Q G+ P+   Y  +IN  C+    +  + +   M  +G
Sbjct: 462 LVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRG 521

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    Y+ +I+   K  +   A  +  +ML  G  P+  TY +L+   C  + + E  
Sbjct: 522 YVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVV 581

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M   G+ PD + +++LI  + +   +  AL  FR M   GL  D  LYT +I G+
Sbjct: 582 TLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGF 641

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   +  A  + +EM  KG    VVTY  ++ G  +     +A+  +N ML+ G+ PD 
Sbjct: 642 SKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDA 701

Query: 241 YTFTTLIHGHCKDG 254
                L  G+  DG
Sbjct: 702 KLSCILGFGNDADG 715



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 89/185 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++  K  K+  A     +M  +G  P+  TY +LIN  C +  L E   L   M  +G
Sbjct: 532 IIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEG 591

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    Y SLI   CK+     A E+   M ++GLS D   Y  L+    +   M  A+
Sbjct: 592 LTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQ 651

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+ +G+ P +V+++ LI  + + G   +A M +  M  AG+ PD  L  I+  G 
Sbjct: 652 CLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCILGFGN 711

Query: 181 CRNGF 185
             +GF
Sbjct: 712 DADGF 716


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 253/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C+   +  A+  L  M +    PD   YN LINAY   G   +A   ++ M   G
Sbjct: 284 MILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNG 343

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + T++++I   C +G    A+++ + + ++GLSP+ A YNTL+    +  ++ +A 
Sbjct: 344 CKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQAN 403

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM  +G+APD  +F+ L+    + G+   +   FR+   + LVPD  LY + + G 
Sbjct: 404 MLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGL 463

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA++  ++MLEKG    VV +N+++    RA     A   +  ML  G+ P  
Sbjct: 464 CWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSS 523

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T ++++ G  K G + +A +L   M  K +  + V +  L+DG+ KVG+   A+ LW +
Sbjct: 524 STCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYE 583

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +R I P+ I++   I+G    G V EA+  + EM  KG  P     N++I G C  G 
Sbjct: 584 MEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGK 643

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +   +M  +G+ PD  + N +INGF +E  M  AF   ++M + G+ PD +TYN 
Sbjct: 644 LHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNT 703

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G+C+   M  ++  L +M   G +PD +TY   I G  S   +  A    DE++  G
Sbjct: 704 LIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVG 763

Query: 481 FVPD 484
            VP+
Sbjct: 764 VVPN 767



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 240/447 (53%), Gaps = 2/447 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K   +  A M   EM  KG+ PD  T+N L+    + G   ++++L    S   L P   
Sbjct: 395 KARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCS 454

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            Y+  + GLC  G+ D A + L++ML+ G+ P    +N+++    R      A + +  M
Sbjct: 455 LYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIM 514

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G+ P   + S+++   S+ G+L  A     +M   GL  + V +T++++GY + G  
Sbjct: 515 LMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDT 574

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             A  +  EM  +G   D + ++  ++GL +A ++ EA + F+EM ++G  P+ + + +L
Sbjct: 575 AGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSL 634

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           IHG C  G +++AL L   M QK + PDI T N +I+GFCK G M+ A   +A+M    +
Sbjct: 635 IHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGV 694

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           +P+ ++Y  LI GYC +  +  A     +M   G  P + + N  I+G+C S   S+A  
Sbjct: 695 TPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVT 754

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            L ++++ GV P++++YNT++N  V  + +D+A  L +K+     VP+V+T NV+L+ FC
Sbjct: 755 MLDELIAVGVVPNTVTYNTMMNA-VCTDMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFC 813

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTY 453
           +QG M +  LI  + + K L  D   Y
Sbjct: 814 KQG-MPEKALIWGQKLNKLLRADFIGY 839



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 240/464 (51%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G  P    +N +I  +C++G+L  A  L+  M     +P V+ YN LIN    +GR
Sbjct: 269 MIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGR 328

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A   L  M++ G  P   T++T++   C + N+ EA +IF  +   G++P++  ++T
Sbjct: 329 TSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNT 388

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  + +   + +A M + EM+  G+ PD   + I++ G  + G   ++ ++  +     
Sbjct: 389 LMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSS 448

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            V D   Y+  + GLC A  L EA     +MLE+G+ P    F ++I  + + G  + A 
Sbjct: 449 LVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAH 508

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             + IM    + P   T ++++ G  K G +++A  L   MI + +  N +++ +L++GY
Sbjct: 509 KAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGY 568

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G    A  LWYEM  +GI P  ++ +  I G  ++G   +A E  S+M  +G  P++
Sbjct: 569 FKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNN 628

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
             YN+LI+G      + +A  L  +M  +GL+PD+ T N+I+ GFC++GRM  +      
Sbjct: 629 FVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAE 688

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M   G+ PD  TY TLI G+    ++  A  F ++M   G+ PD
Sbjct: 689 MHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPD 732



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 232/456 (50%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D    NTL+  +       E+ ++++ M   G++P     + L   L + G      ++L
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLL 266

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
             M++ G  P    +N +++  C+K  +  AE +   M +    PD+ +++ LI  +   
Sbjct: 267 RGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIR 326

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+   AL +   M   G  P  + ++ II  +C  G V+EA K+ + + E G   +V  Y
Sbjct: 327 GRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMY 386

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           NT+++G  +A+ + +A+ L+ EM ++G+ PD  TF  L+ G+ K G    +  LF   + 
Sbjct: 387 NTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSL 446

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
            S+ PD   Y+  + G C  G++++A +   DM+ + + P+ +++  +I  Y   G    
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDN 506

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A + +  M+  G+ P+  +C++++ G  + G   +A + L KM+ +G+  + +++  L++
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ +  +   A +L  +ME +G+ PD I ++  + G  + G + ++      M +KG  P
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVP 626

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   Y +LI+G  +   L EA +   EM Q+G +PD
Sbjct: 627 NNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPD 662



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 206/417 (49%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N+L+ G         + E+L  M ++G+ P ++  + L     R  +     ++   M R
Sbjct: 212 NTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIR 271

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G  P   +F+ +I  F + G L  A      M      PD   Y I+IN Y   G   +
Sbjct: 272 DGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSD 331

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           AL     M++ GC   ++T++TI+   C    + EA  +F  + E G+ P+   + TL+ 
Sbjct: 332 ALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMS 391

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G+ K  ++ +A  L++ M  K I PD  T+N L+ G  K G+   + +L+ D     + P
Sbjct: 392 GYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVP 451

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           +   Y + + G C  G + EA +   +M+ KG+ P++V+ N++I  Y R+G    A +  
Sbjct: 452 DCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAY 511

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             M+  G+ P S + ++++ G  ++  + +A  L+ KM ++GL  + + + V+L G+ + 
Sbjct: 512 KIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKV 571

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G    +  + + M  +G+ PD   ++  I+G      ++EA+    EM ++GFVP++
Sbjct: 572 GDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNN 628



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 159/369 (43%), Gaps = 6/369 (1%)

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA-LMYFREMKSAGLVPDNVLYTIII 177
           A  I    S + +A D++S+     +  R G    A L+ F          D  +   ++
Sbjct: 161 AAHILAAESLQLLAQDVISW-----VIRRIGASRSAHLVEFMWANHHKYESDFSILNTLM 215

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G+  +    E+L++   M E G        + +   L R         L   M+  G  
Sbjct: 216 RGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPR 275

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P  + F  +I   C+ G +  A +L  +M +   +PD+  YN LI+ +   G    A   
Sbjct: 276 PCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGF 335

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              MI     P+ I++  +I  +C+ G+V EA +++  +   G+ P +   NT++ GY +
Sbjct: 336 LHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFK 395

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           + D  +A+    +M  +G+ PD  ++N L+ G  +      ++ L        LVPD   
Sbjct: 396 ARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSL 455

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y+V + G C  G++ ++   L  M+EKG+ P    + ++I  +        A + +  ML
Sbjct: 456 YDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIML 515

Query: 478 QRGFVPDDA 486
             G VP  +
Sbjct: 516 MFGLVPSSS 524


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 157/500 (31%), Positives = 258/500 (51%), Gaps = 14/500 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV  LCK+ K++  +  + +   +G  P+ + YNTLI+ YC++G +E A  L   +  KG
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY ++ING CKKG       +L EM   GL+ +   YNT++    +  ++ +A 
Sbjct: 270 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAV 329

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E    M   G  PDIV+++TLI    R+G++  A     +    GL+P+   YT +I+ Y
Sbjct: 330 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAY 389

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A     EM E+G   D+VTY  +++GL  A  +  A  +  +MLERGVFPD 
Sbjct: 390 CKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDA 449

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  L+ G CK   +  A  L   M  +S+ PD   Y TL+DGF + G +++A KL+  
Sbjct: 450 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 509

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            I + ++P  + Y  +I GYC  G + +A      M  + + P   + +T+I GY +  D
Sbjct: 510 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHD 569

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   +MV     P+ ++Y +LINGF R+ ++ ++  +  +M+  GLVP+V+TY++
Sbjct: 570 LDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSI 629

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS-------------QNNLK 467
           ++  FC++ ++ D+      M+     P+  T+  L+NG                Q N +
Sbjct: 630 LIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQ 689

Query: 468 EAF-RFHDEMLQRGFVPDDA 486
             F  F   M+  G+ P  A
Sbjct: 690 SMFLNFFGRMISDGWAPRSA 709



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 274/564 (48%), Gaps = 81/564 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMN-SMSGK 59
           ++  L +       ++ L  M  + + P     + +I AY   G +E+A +L    +   
Sbjct: 100 LLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTY 159

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM------------------------- 94
              P V   NSL+N L K GR + A+++ DEML++                         
Sbjct: 160 TYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGK 219

Query: 95  --------------GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
                         G  P+   YNTL+   C+K +M  A  +F E+  +G  P + ++  
Sbjct: 220 LEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGA 279

Query: 141 LIGIFSRNG---QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           +I  F + G    +DR LM   EM S GL  +  +Y  II+   ++G +++A++  + M+
Sbjct: 280 IINGFCKKGDFKAIDRLLM---EMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 336

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           E GC  D+VTYNT+++G CR   ++EAD L  + L +G+ P+ +++T LIH +CK G  +
Sbjct: 337 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD 396

Query: 258 KALNLFDIMTQKSIKPDIVT-----------------------------------YNTLI 282
           +A N    MT++  KPD+VT                                   YN L+
Sbjct: 397 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM 456

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            G CK  ++  A  L A+M+ + + P+   Y  L++G+   G++ EA +L+   + KG+ 
Sbjct: 457 SGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMN 516

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P +V  N +IKGYC+ G    A   +++M    + PD  +Y+T+I+G+V++ ++D A  +
Sbjct: 517 PGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKM 576

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M      P+V+TY  ++ GFCR+G +H S  I   M   GL P+  TY+ LI     
Sbjct: 577 FREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCK 636

Query: 463 QNNLKEAFRFHDEMLQRGFVPDDA 486
           +  L +A  F +EML    VP+D 
Sbjct: 637 EAKLIDAASFFEEMLMNKCVPNDV 660



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 238/458 (51%), Gaps = 15/458 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+D K+  A   L +   KG+ P+  +Y  LI+AYC++G  + A   +  M+ +G
Sbjct: 350 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 409

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + TY +L++GL   G  D A  + ++ML+ G+ PD   YN L+   C+K  +  A+
Sbjct: 410 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 469

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  + V PD   ++TL+  F RNG LD A   F      G+ P  V Y  +I GY
Sbjct: 470 LLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGY 529

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A+   + M ++    D  TY+T+++G  +   L  A  +F EM++    P+ 
Sbjct: 530 CKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 589

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI+G C+ G+++++L +F  M    + P++VTY+ LI  FCK  ++  A   + +
Sbjct: 590 VTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEE 649

Query: 301 MISRKISPNYISYGILINGYCSMG--HVTEA------------FRLWYEMVGKGIKPTLV 346
           M+  K  PN +++  L+NG+   G   ++E                +  M+  G  P   
Sbjct: 650 MLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSA 709

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + N+I+   C+ G    A +  +KM S+G  PDS+S+  L++G   E    +   +VS  
Sbjct: 710 AYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCN 769

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            N+  +   + Y+ IL  +  QG   ++ +IL  M E+
Sbjct: 770 LNERELQIAVNYSSILDQYLPQG-TSEASVILQTMFEE 806



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 220/424 (51%), Gaps = 7/424 (1%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA--EEIF 123
           F Y+SL+  L +       + VL+ M    +SP T    ++++++     + E   E  +
Sbjct: 95  FAYSSLLKLLARSRVFSEMEVVLENMRVEEMSP-TREAMSIVIQAYSDSGLVEKALELYY 153

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM----KSAGLVPDNVLYTIIING 179
             +      PD+++ ++L+ +  + G+++ A   + EM     +     DN    I++ G
Sbjct: 154 FVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKG 213

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G + E  K+ ++   +GC+ +++ YNT+++G C+   +  A+ LF E+  +G  P 
Sbjct: 214 LCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPT 273

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +I+G CK G+      L   M  + +  ++  YNT+ID   K G + KA +   
Sbjct: 274 VETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIE 333

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            MI     P+ ++Y  LI+G C  G V+EA +L  + +GKG+ P   S   +I  YC+ G
Sbjct: 334 GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 393

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A  +L +M   G  PD ++Y  L++G V    +D A  +  KM  +G+ PD   YN
Sbjct: 394 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 453

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++++G C++ ++  ++L+L  M+++ + PD   Y TL++G +   NL EA +  +  +++
Sbjct: 454 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 513

Query: 480 GFVP 483
           G  P
Sbjct: 514 GMNP 517



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 184/355 (51%), Gaps = 9/355 (2%)

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++S+L+ + +R+       +    M+   + P     +I+I  Y  +G V +AL++   +
Sbjct: 96  AYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155

Query: 197 LEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLE------RGVFPDFYTFTTLIHG 249
           L+      DV+  N++LN L +   +  A  L++EMLE      R V  D Y+   ++ G
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCV--DNYSTCIMVKG 213

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK+G + +   L +    +   P+I+ YNTLIDG+CK G+ME AN L+ ++  +   P 
Sbjct: 214 LCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPT 273

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +YG +ING+C  G      RL  EM  +G+   +   NTII    + G   KA E + 
Sbjct: 274 VETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIE 333

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M+  G  PD ++YNTLI+G  R+  + +A  L+ +   +GL+P+  +Y  ++  +C+QG
Sbjct: 334 GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 393

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
               +   L  M E+G  PD  TY  L++G V    +  A    ++ML+RG  PD
Sbjct: 394 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPD 448


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/472 (32%), Positives = 250/472 (52%), Gaps = 26/472 (5%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+++G  PD  TY+ ++   C+ G L++A +L+  +   G+K  V TY+ +I+G CK  
Sbjct: 63  QMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKAS 122

Query: 80  RCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           R D A E+   M   G   PD  T+N+LL   C  E MSEA  +F  M++ G  P+++S+
Sbjct: 123 RVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISY 182

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           STL+    + G+LD A   + EM     VPD V YT  + G C+   V EA     +M+ 
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242

Query: 199 KGCVMDVVTYNTILN-----------------GLCRAKMLTEADDLFNEMLERGVFPDFY 241
           KG   D V ++T++                   LCR+ ML EA   F EM+ R   P   
Sbjct: 243 KGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIK-----PDIVTYNTLIDGFCKVGEMEKANK 296
            F TLIH  CK   +   + LF  M  KS+K     P++ TYN ++D  CK  ++++A +
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRM--KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L  +M +  +SP+ ++Y  L++G C +G +  A  L  EM  +G+ P   +  +I+    
Sbjct: 361 LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALS 420

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           ++G    A   L  M + G  PD ++YNTL++G  +   +D+A   ++KM      PDV 
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF 480

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +Y +I+T  CR G+   +  I   M+++G+ PD   Y +L++G +++N L++
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDG-LARNGLED 531



 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 248/483 (51%), Gaps = 21/483 (4%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           QKG      TYN  ++A  +    + A++    M  +G  P  FTY+ ++ GLCK G  D
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG-VAPDIVSFSTL 141
           +AKE+L ++ + G+  +  TY+ ++   C+   + +A EIF  MS  G   PD+V+F++L
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           +       ++  A + F  M  AG  P+ + Y+ +++G C+ G + EA ++ +EM+EK C
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI-----HGH------ 250
           V D+V Y + + GLC+A  + EA D   +M+ +G   D   F+T+I      GH      
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270

Query: 251 ------CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
                 C+ G +++A   F+ M  ++  P    +NTLI   CK   +     L+  M S 
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330

Query: 305 K---ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           K     PN  +Y I+++  C    + EA  L  EM   G+ P +V+ + ++ G C+ G  
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A + L +M  EGV PDS +  +++N   +   +D A + +  M+ +G  PD++TYN +
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTL 450

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L G C+ GR+ ++   L +M+     PD  +YT +I           A     EM++RG 
Sbjct: 451 LDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGV 510

Query: 482 VPD 484
           +PD
Sbjct: 511 LPD 513



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 255/498 (51%), Gaps = 28/498 (5%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++  CK  ++D A ++F       G  PD VT+N+L+   C    + EAF L   M+  
Sbjct: 114 VIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKA 173

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P V +Y++L++GLCK GR D A  + +EM++    PD   Y + +   C+   ++EA
Sbjct: 174 GCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEA 233

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFS-----------------RNGQLDRALMYFREMK 162
            +   +M  +G   D V+FST+IGI                   R+G LD A   F EM 
Sbjct: 234 CDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMI 293

Query: 163 SAGLVPDNVLYTIIINGYCR-----NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
           S    P   L+  +I+  C+     +G +L   +    M E  C  ++ TYN +++ LC+
Sbjct: 294 SRNHPPSAELFNTLIHAVCKSKRLPDGVLL--FQRMKSMKEFYCPPNLETYNIMVDNLCK 351

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
           AK L EA +L NEM   G+ PD  T++ L+ G CK G +++A +L + M+++ + PD  T
Sbjct: 352 AKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
             ++++   K G+++ A      M +R  +P+ ++Y  L++G C  G + EA     +MV
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
                P + S   II   CRSG A+ A     +MV  GV PD++ Y++L++G  R    D
Sbjct: 472 AAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            A  L   ++     PD + + ++L G C+ G+  D+  ++ RM + G   D  TY +++
Sbjct: 532 LALEL---LKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVV 588

Query: 458 NGHVSQNNLKEAFRFHDE 475
           +G      + +A +  D+
Sbjct: 589 SGLRKLGKVDKARQLVDD 606



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 133/233 (57%), Gaps = 3/233 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK  K+D A   L EM ++GV+PD+ T  +++NA  + G ++ A   + +M  +G
Sbjct: 380 LVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARG 439

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN+L++GLCK GR D A   L +M+    +PD  +Y  ++   CR    + A 
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAH 499

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF EM +RGV PD V + +L+   +RNG  D AL     +K++   PD V++ ++++G 
Sbjct: 500 AIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLDGL 556

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           C+ G   +A ++ + M + G   D  TY ++++GL +   + +A  L ++  E
Sbjct: 557 CKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASE 609


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 170/540 (31%), Positives = 263/540 (48%), Gaps = 56/540 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLE------------- 47
           +++AL + +++D        M ++ V  D  TY+ LI A+CR G ++             
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251

Query: 48  --------EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD 99
                    A +L  SM  KGL P  +TY+ LI+GLCK  R + AK +L EM  +G+S D
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
             TY+ L+    +  N   A+ +  EM   G+      +   I + S+ G +++A   F 
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
            M ++GL+P    Y  +I GYCR   V +  ++  EM ++  V+   TY T++ G+C + 
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            L  A ++  EM+  G  P+   +TTLI    ++     A+ +   M ++ I PDI  YN
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           +LI G  K   M++A     +M+   + PN  +YG  I+GY        A +   EM   
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 340 GIKPTLVSCNTIIKGYCRS-------------------GDASK----------------A 364
           G+ P  V C  +I  YC+                    GDA                  A
Sbjct: 552 GVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           +E   +M  +G+ PD  SY  LINGF +  NM KA ++  +M  +GL P+VI YN++L G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           FCR G +  ++ +L  M  KGL+P+  TY T+I+G+    +L EAFR  DEM  +G VPD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 152/518 (29%), Positives = 258/518 (49%), Gaps = 38/518 (7%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           + K+  ++ AK     M   G+ P    Y +LI  YCRE  + + ++L+  M  + +   
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
            +TY +++ G+C  G  D A  ++ EM+  G  P+   Y TL+    +     +A  +  
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM  +G+APDI  +++LI   S+  ++D A  +  EM   GL P+   Y   I+GY    
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
               A K   EM E G + + V    ++N  C+ + + EA   +  M+++G+  D  T+T
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            L++G  K+  ++ A  +F  M  K I PD+ +Y  LI+GF K+G M+KA+ ++ +M+  
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            ++PN I Y +L+ G+C  G + +A  L  EM  KG+ P  V+  TII GYC+SGD ++A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF------------------ALVS-- 404
                +M  +G+ PDS  Y TL++G  R  ++++A                   AL++  
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWV 776

Query: 405 ----KMENQGLV--------------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
               K E +  V              P+ +TYN+++   C++G +  ++ +  +M    L
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P   TYT+L+NG+       E F   DE +  G  PD
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 264/548 (48%), Gaps = 79/548 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  +C    +D A   + EM   G  P+ V Y TLI  + +     +A +++  M  +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT--------------- 105
           + P +F YNSLI GL K  R D A+  L EM++ GL P+  TY                 
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 106 --------------------LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                               L+ E C+KE + EA   +  M  +G+  D  +++ L+   
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +N ++D A   FREM+  G+ PD   Y ++ING+ + G + +A  + DEM+E+G   +V
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           + YN +L G CR+  + +A +L +EM  +G+ P+  T+ T+I G+CK G++ +A  LFD 
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKA------------------------------- 294
           M  K + PD   Y TL+DG C++ ++E+A                               
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKT 782

Query: 295 -------NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
                  N+L      R   PN ++Y I+I+  C  G++  A  L+++M    + PT+++
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
             +++ GY + G  ++      + ++ G++PD I Y+ +IN F++E    KA  LV +M 
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902

Query: 408 NQGLVPD-----VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH-V 461
            +  V D     + T   +L+GF + G M  +E ++  M+     PD +T   LIN   +
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962

Query: 462 SQNNLKEA 469
           S N   EA
Sbjct: 963 SSNQRVEA 970



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 251/469 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +++ AK  L EM+  GV  D  TY+ LI+   +    + A  L++ M   G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +    + Y+  I  + K+G  ++AK + D M+  GL P    Y +L+   CR++N+ +  
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM +R +     ++ T++     +G LD A    +EM ++G  P+ V+YT +I  +
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +N    +A+++  EM E+G   D+  YN+++ GL +AK + EA     EM+E G+ P+ 
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+   I G+ +      A      M +  + P+ V    LI+ +CK  ++ +A   +  
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRS 582

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + I  +  +Y +L+NG      V +A  ++ EM GKGI P + S   +I G+ + G+
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA     +MV EG+ P+ I YN L+ GF R   ++KA  L+ +M  +GL P+ +TY  
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           I+ G+C+ G + ++  +   M  KGL PD   YTTL++G    N+++ A
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 224/501 (44%), Gaps = 49/501 (9%)

Query: 19  CEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKK 78
           C  E  G   D V +  L + Y  +G++EEA  + +S  G  L P +     L++ L + 
Sbjct: 140 CSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRW 199

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
            R D   +V   M++  +  D  TY+ L++  CR  N+   +++               F
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL--------------F 245

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
            T     +    +D AL     M   GLVP    Y ++I+G C+   + +A  +  EM  
Sbjct: 246 KTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS 305

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G  +D  TY+ +++GL + +    A  L +EM+  G+    Y +   I    K+G M K
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  LFD M    + P    Y +LI+G+C+   + +  +L  +M  R I  +  +YG ++ 
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G CS G +  A+ +  EM+  G +P +V   T+IK + ++     A   L +M  +G+ P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF------------- 425
           D   YN+LI G  + + MD+A + + +M   GL P+  TY   ++G+             
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545

Query: 426 ----------------------CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
                                 C++ ++ ++      M+++G+  D  TYT L+NG    
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
           + + +A     EM  +G  PD
Sbjct: 606 DKVDDAEEIFREMRGKGIAPD 626



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 34/249 (13%)

Query: 257 NKALNLFD-IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI--------- 306
           +K L+ F+ + +QK  +  + +++ L    C  G  EKA  +   MI R           
Sbjct: 78  SKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSI 137

Query: 307 ----------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
                     S + + +GIL +GY + G++ EA  ++   +G  + P L  C  ++    
Sbjct: 138 VRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           R        +    MV   V  D  +Y+ LI    R  N+     ++ K E +       
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTA--- 254

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           T NV        G +   E     MI KGL P + TY  LI+G      L++A     EM
Sbjct: 255 TLNV-------DGALKLKE----SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303

Query: 477 LQRGFVPDD 485
              G   D+
Sbjct: 304 DSLGVSLDN 312


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 170/540 (31%), Positives = 263/540 (48%), Gaps = 56/540 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLE------------- 47
           +++AL + +++D        M ++ V  D  TY+ LI A+CR G ++             
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251

Query: 48  --------EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD 99
                    A +L  SM  KGL P  +TY+ LI+GLCK  R + AK +L EM  +G+S D
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
             TY+ L+    +  N   A+ +  EM   G+      +   I + S+ G +++A   F 
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
            M ++GL+P    Y  +I GYCR   V +  ++  EM ++  V+   TY T++ G+C + 
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            L  A ++  EM+  G  P+   +TTLI    ++     A+ +   M ++ I PDI  YN
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           +LI G  K   M++A     +M+   + PN  +YG  I+GY        A +   EM   
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 340 GIKPTLVSCNTIIKGYCRSG-------------------DASK----------------A 364
           G+ P  V C  +I  YC+ G                   DA                  A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           +E   +M  +G+ PD  SY  LINGF +  NM KA ++  +M  +GL P+VI YN++L G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           FCR G +  ++ +L  M  KGL+P+  TY T+I+G+    +L EAFR  DEM  +G VPD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/518 (29%), Positives = 257/518 (49%), Gaps = 38/518 (7%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           + K+  ++ AK     M   G+ P    Y +LI  YCRE  + + ++L+  M  + +   
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
            +TY +++ G+C  G  D A  ++ EM+  G  P+   Y TL+    +     +A  +  
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM  +G+APDI  +++LI   S+  ++D A  +  EM   GL P+   Y   I+GY    
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
               A K   EM E G + + V    ++N  C+   + EA   +  M+++G+  D  T+T
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            L++G  K+  ++ A  +F  M  K I PD+ +Y  LI+GF K+G M+KA+ ++ +M+  
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            ++PN I Y +L+ G+C  G + +A  L  EM  KG+ P  V+  TII GYC+SGD ++A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF------------------ALVS-- 404
                +M  +G+ PDS  Y TL++G  R  ++++A                   AL++  
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWV 776

Query: 405 ----KMENQGLV--------------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
               K E +  V              P+ +TYN+++   C++G +  ++ +  +M    L
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P   TYT+L+NG+       E F   DE +  G  PD
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 249/488 (51%), Gaps = 5/488 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  +C    +D A   + EM   G  P+ V Y TLI  + +     +A +++  M  +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +F YNSLI GL K  R D A+  L EM++ GL P+  TY   +         + A+
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   EM   GV P+ V  + LI  + + G++  A   +R M   G++ D   YT+++NG 
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +N  V +A ++  EM  KG   DV +Y  ++NG  +   + +A  +F+EM+E G+ P+ 
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  L+ G C+ G + KA  L D M+ K + P+ VTY T+IDG+CK G++ +A +L+ +
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+   Y  L++G C +  V  A  + +    KG   +    N +I    + G 
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITI-FGTNKKGCASSTAPFNALINWVFKFGK 781

Query: 361 ASKADEFLSKMVSEGVD----PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
                E L++++    D    P+ ++YN +I+   +E N++ A  L  +M+N  L+P VI
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY  +L G+ + GR  +   +    I  G+ PD   Y+ +IN  + +    +A    D+M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 477 LQRGFVPD 484
             +  V D
Sbjct: 902 FAKNAVDD 909



 Score =  257 bits (657), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 252/469 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +++ AK  L EM+  GV  D  TY+ LI+   +    + A  L++ M   G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +    + Y+  I  + K+G  ++AK + D M+  GL P    Y +L+   CR++N+ +  
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM +R +     ++ T++     +G LD A    +EM ++G  P+ V+YT +I  +
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +N    +A+++  EM E+G   D+  YN+++ GL +AK + EA     EM+E G+ P+ 
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+   I G+ +      A      M +  + P+ V    LI+ +CK G++ +A   +  
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + I  +  +Y +L+NG      V +A  ++ EM GKGI P + S   +I G+ + G+
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA     +MV EG+ P+ I YN L+ GF R   ++KA  L+ +M  +GL P+ +TY  
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           I+ G+C+ G + ++  +   M  KGL PD   YTTL++G    N+++ A
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751



 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 251/479 (52%), Gaps = 11/479 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K  ++D A+ FL EM + G+ P+  TY   I+ Y        A + +  M   G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P       LIN  CKKG+   A      M+  G+  D  TY  L+    + + + +AE
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF EM  +G+APD+ S+  LI  FS+ G + +A   F EM   GL P+ ++Y +++ G+
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G + +A ++ DEM  KG   + VTY TI++G C++  L EA  LF+EM  +G+ PD 
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA----NK 296
           + +TTL+ G C+  ++ +A+ +F    +K        +N LI+   K G+ E      N+
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L      R   PN ++Y I+I+  C  G++  A  L+++M    + PT+++  +++ GY 
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD-- 414
           + G  ++      + ++ G++PD I Y+ +IN F++E    KA  LV +M  +  V D  
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911

Query: 415 ---VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH-VSQNNLKEA 469
              + T   +L+GF + G M  +E ++  M+     PD +T   LIN   +S N   EA
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 224/501 (44%), Gaps = 49/501 (9%)

Query: 19  CEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKK 78
           C  E  G   D V +  L + Y  + ++EEA  + +S  G  L P +     L++ L + 
Sbjct: 140 CSQEFVGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRW 199

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
            R D   +V   M++  +  D  TY+ L++  CR  N+   +++               F
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL--------------F 245

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
            T     +    +D AL     M   GLVP    Y ++I+G C+   + +A  +  EM  
Sbjct: 246 KTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS 305

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G  +D  TY+ +++GL + +    A  L +EM+  G+    Y +   I    K+G M K
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  LFD M    + P    Y +LI+G+C+   + +  +L  +M  R I  +  +YG ++ 
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G CS G +  A+ +  EM+  G +P +V   T+IK + ++     A   L +M  +G+ P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF------------- 425
           D   YN+LI G  + + MD+A + + +M   GL P+  TY   ++G+             
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545

Query: 426 ----------------------CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
                                 C++G++ ++      M+++G+  D  TYT L+NG    
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
           + + +A     EM  +G  PD
Sbjct: 606 DKVDDAEEIFREMRGKGIAPD 626



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 97/249 (38%), Gaps = 34/249 (13%)

Query: 257 NKALNLFD-IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI--------- 306
           +K L+ F+ + +QK  +  + +++ L    C  G  EKA  +   MI R           
Sbjct: 78  SKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSI 137

Query: 307 ----------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
                     S + + +GIL +GY +  ++ EA  ++   +G  + P L  C  ++    
Sbjct: 138 VRCSQEFVGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           R        +    MV   V  D  +Y+ LI    R  N+     ++ K E +       
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTA--- 254

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           T NV        G +   E     MI KGL P + TY  LI+G      L++A     EM
Sbjct: 255 TLNV-------DGALKLKE----SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303

Query: 477 LQRGFVPDD 485
              G   D+
Sbjct: 304 DSLGVSLDN 312


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 159/515 (30%), Positives = 256/515 (49%), Gaps = 35/515 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC   +I  A   L EM ++G  P    Y+ ++ A CR G    A +++  +  +G
Sbjct: 128 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 187

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V   N ++N +C +G  D+A  +L ++   G  PD  +YN +L   C  +     +
Sbjct: 188 CALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ 247

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R    P+IV+F+TLI    RNG  +R      +M   G  PD  +Y  II+G 
Sbjct: 248 ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGI 307

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++ + M   G   +VV YNT+L GLC A+   E ++L  EM ++    D 
Sbjct: 308 CKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 367

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  L+   C++G +++ + L + M      PD++TY T+I+GFCK G +++A  L   
Sbjct: 368 VTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 427

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +    PN ISY I++ G CS     +A  L  +M+ +G     ++ NT+I   C+ G 
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L +M+  G  PD ISY+T+I+G  +    D+A  L++ M N+G+ P+ I Y+ 
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547

Query: 421 ILTGFCRQGRMHD--------------SELILWR---------------------MIEKG 445
           I +   R+GR++               S+ +L+                      M+  G
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             P+ STYT LI G  S+  +KEA     E+  +G
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 212/452 (46%), Gaps = 38/452 (8%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN ++  YCR G LE A +L  ++    + P  +TY  ++  LC +GR            
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGR------------ 137

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
                                  +++A  +  EM RRG AP    +  ++    R G   
Sbjct: 138 -----------------------IADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 174

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            A+    ++ + G   D     +++N  C  G V +AL +  ++   GC  DVV+YN +L
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVL 234

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            GLC AK      +L  EM+     P+  TF TLI   C++G   +   +   M +    
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCT 294

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           PDI  Y T+IDG CK G ++ A+++   M S  + PN + Y  L+ G CS     E   L
Sbjct: 295 PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             EM  K      V+ N ++  +C++G   +  E L +M+  G  PD I+Y T+INGF +
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCK 414

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           E  +D+A  L+  M   G  P+ I+Y ++L G C   R  D+E ++ +MI++G   +  T
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 474

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + TLIN    +  +++A     +ML  G  PD
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 132/278 (47%), Gaps = 3/278 (1%)

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ G CRA  L  A  L   +    V P+ YT+  ++   C  G +  AL + D M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++   P    Y+ +++  C+ G    A ++  D+ +R  + +  +  +++N  C  G V 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  ++   G +P +VS N ++KG C +       E + +MV     P+ +++NTLI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   R    ++   ++++M   G  PD+  Y  I+ G C++G +  +  IL RM   GL 
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           P+   Y TL+ G  S    +E      EM  +    DD
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 367


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/472 (32%), Positives = 250/472 (52%), Gaps = 26/472 (5%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+++G  PD  TY+ ++   C+ G L++A +L+  +   G+K  V TY+ +I+G CK  
Sbjct: 63  QMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKAS 122

Query: 80  RCDRAKEVLDEM-LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           R D A E+   M    G  PD  T+N+LL   C  E MSEA  +F  M++ G  P+++S+
Sbjct: 123 RVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISY 182

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           STL+    + G+LD A   + EM     VPD V YT  + G C+   V EA     +M+ 
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242

Query: 199 KGCVMDVVTYNTIL-----------------NGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           KG   D V ++T++                   LCR+ ML EA   F EM+ R   P   
Sbjct: 243 KGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIK-----PDIVTYNTLIDGFCKVGEMEKANK 296
            F TLIH  CK   +   + LF  M  KS+K     P++ TYN ++D  CK  ++++A +
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRM--KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L  +M +  +SP+ ++Y  L++G C +G +  A  L  EM  +G+ P   +  +I+    
Sbjct: 361 LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALS 420

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           ++G    A   L  M + G  PD ++YNTL++G  +   +D+A   ++KM      PDV 
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF 480

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +Y +I+T  CR G+   +  I   M+++G+ PD   Y +L++G +++N L++
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDG-LARNGLED 531



 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 248/483 (51%), Gaps = 21/483 (4%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           QKG      TYN  ++A  +    + A++    M  +G  P  FTY+ ++ GLCK G  D
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG-VAPDIVSFSTL 141
           +AKE+L ++ + G+  +  TY+ ++   C+   + +A EIF  MS  G   PD+V+F++L
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           +       ++  A + F  M  AG  P+ + Y+ +++G C+ G + EA ++ +EM+EK C
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI-----HGH------ 250
           V D+V Y + + GLC+A  + EA D   +M+ +G   D   F+T+I      GH      
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270

Query: 251 ------CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
                 C+ G +++A   F+ M  ++  P    +NTLI   CK   +     L+  M S 
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330

Query: 305 K---ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           K     PN  +Y I+++  C    + EA  L  EM   G+ P +V+ + ++ G C+ G  
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A + L +M  EGV PDS +  +++N   +   +D A + +  M+ +G  PD++TYN +
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTL 450

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L G C+ GR+ ++   L +M+     PD  +YT +I           A     EM++RG 
Sbjct: 451 LDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGV 510

Query: 482 VPD 484
           +PD
Sbjct: 511 LPD 513



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 253/498 (50%), Gaps = 28/498 (5%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++  CK  ++D A ++F       G  PD VT+N+L+   C    + EAF L   M+  
Sbjct: 114 VIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKA 173

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P V +Y++L++GLCK GR D A  + +EM++    PD   Y + +   C+   ++EA
Sbjct: 174 GCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEA 233

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFS-----------------RNGQLDRALMYFREMK 162
            +   +M  +G   D V+FST+IGI                   R+G LD A   F EM 
Sbjct: 234 CDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMI 293

Query: 163 SAGLVPDNVLYTIIINGYCR-----NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
           S    P   L+  +I+  C+     +G +L   +    M E  C  ++ TYN +++ LC+
Sbjct: 294 SRNHPPSAELFNTLIHAVCKSKRLPDGVLL--FQRMKSMKEFYCPPNLETYNIMVDNLCK 351

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
           AK L EA +L NEM   G+ PD  T++ L+ G CK G +++A +L + M+++ + PD  T
Sbjct: 352 AKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
             ++++   K G+++ A      M +R  +P+ ++Y  L++G C  G + EA     +MV
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
                P + S   II   CRSG A+ A     +MV  GV PD++ Y++L++G  R    D
Sbjct: 472 AAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            A  L   ++     PD + + +++ G C+ G+  D+  ++ RM + G   D  TY  ++
Sbjct: 532 LALEL---LKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVV 588

Query: 458 NGHVSQNNLKEAFRFHDE 475
            G      + +A +  D+
Sbjct: 589 RGLRKLGKVDKARQLVDD 606



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 131/233 (56%), Gaps = 3/233 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK  K+D A   L EM ++GV+PD+ T  +++NA  + G ++ A   + +M  +G
Sbjct: 380 LVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARG 439

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN+L++GLCK GR D A   L +M+    +PD  +Y  ++   CR    + A 
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAH 499

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF EM +RGV PD V + +L+   +RNG  D AL     +K++   PD V++ ++++G 
Sbjct: 500 AIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVDGL 556

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           C+ G   +A ++ + M + G   D  TY  ++ GL +   + +A  L ++  E
Sbjct: 557 CKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASE 609


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 265/488 (54%), Gaps = 6/488 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ +LC    +D A      +  +G+ PD +TY+TL++ + +   L+ A  L++ M    
Sbjct: 165 MLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYE 224

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           ++P    YN+L+ G  + G  ++A  V +++++  G SP+ ATYN +L   C+     EA
Sbjct: 225 VQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEA 284

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++  M      PD++++ T+I    R+  +D A   + EM   GLVPD V+Y  ++ G
Sbjct: 285 GDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKG 344

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER--GVF 237
           +C  G V EA K  D M   G + +V +YN +L GL    M+ +A DL+ E+LE+   + 
Sbjct: 345 FCHAGRVGEAWKFWDSMSVSG-IRNVTSYNIMLKGLFDGGMVDKATDLW-ELLEKDDSLS 402

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  TF+T+IHG C+ G  NK+L + +       + D  +Y+++I G CK G ++ A KL
Sbjct: 403 PDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKL 462

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  +      PN   Y  LING+C     ++A R++ +M      PT ++ NT+I G C+
Sbjct: 463 YEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCK 522

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +    +A  F  +M+ +G   D  +Y +LI G  R++ +D A AL +++ ++GL  DV+ 
Sbjct: 523 AEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVM 582

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +N+++ G C  G++ ++  +L  M EK    P+  TY TL++G        +A      +
Sbjct: 583 HNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAI 642

Query: 477 LQRGFVPD 484
           L+ G VPD
Sbjct: 643 LENGLVPD 650



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 242/458 (52%), Gaps = 10/458 (2%)

Query: 35  TLINAYCREGFLEEAFQLMNSM-SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
            +++A+ R    + A      + S  G  PGV ++N+L++   +  R   A      +  
Sbjct: 89  VVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSH 148

Query: 94  MG----LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
                 ++P+  TYN +L   C + ++  A  +F  +  RG+APD +++STL+  F +N 
Sbjct: 149 GAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML-EKGCVMDVVTY 208
           +LD AL    EM S  + PD V Y  ++ G  RNG   +A+++ ++++ + G   ++ TY
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N +L+GLC+  M  EA D++  M+     PD  T+ T+IHG C+  +++ A  ++  M +
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PD+V YN+L+ GFC  G + +A K W  M    I  N  SY I++ G    G V +
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDK 387

Query: 329 AFRLWYEMVGK--GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           A  LW E++ K   + P +V+ +T+I G C  G A+K+ + L +  + G + D  SY+++
Sbjct: 388 ATDLW-ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSM 446

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G  ++  +D A  L  K+      P+   YN ++ GFC+  +  D+  +  +M E   
Sbjct: 447 ISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDC 506

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +P   TY TLI+G        EA RF  EML++G + D
Sbjct: 507 SPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLD 544



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 228/395 (57%), Gaps = 5/395 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LC+   +DSA     EM + G+ PD V YN+L+  +C  G + EA++  +SMS  G
Sbjct: 306 MIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG 365

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM--GLSPDTATYNTLLVESCRKENMSE 118
           ++  V +YN ++ GL   G  D+A + L E+L+    LSPD  T++T++   C K   ++
Sbjct: 366 IR-NVTSYNIMLKGLFDGGMVDKATD-LWELLEKDDSLSPDMVTFSTMIHGLCEKGFANK 423

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           + +I  E    G   D  S+S++I    ++G+LD A+  + ++      P++ +Y  +IN
Sbjct: 424 SLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALIN 483

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+     +A+++  +M E  C    +TYNT+++GLC+A+   EA     EMLE+G   
Sbjct: 484 GFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCML 543

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+ +LI G C+D  ++ AL L++ +  K ++ D+V +N LI G C  G++++A++L 
Sbjct: 544 DVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLL 603

Query: 299 ADMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           ++M  +    PN ++Y  L++G+   G   +A  LW  ++  G+ P ++S NT IKG C 
Sbjct: 604 SEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCS 663

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
                +  + L++M++ G+ P +I++N L+   ++
Sbjct: 664 CNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIK 698



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 151/293 (51%), Gaps = 1/293 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LC+    + +   L E    G   D  +Y+++I+  C++G L++A +L   +S   
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP    YN+LING C+  +   A  V  +M +   SP T TYNTL+   C+ E   EA 
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEAS 530

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM  +G   D+ ++ +LI    R+ ++D AL  + ++   GL  D V++ I+I+G 
Sbjct: 531 RFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGL 590

Query: 181 CRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C  G V EA ++  EM EK  C  +VVTYNT+++G        +A  L+  +LE G+ PD
Sbjct: 591 CSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPD 650

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
             ++ T I G C      + + L + M    I P  +T+N L+    K G ++
Sbjct: 651 IISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 156/485 (32%), Positives = 253/485 (52%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L   +K+   ++    M  +G+ PD  T+N LI A CR   +  A  LM  M   G
Sbjct: 166 LLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFG 225

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   T+ +++ G  ++G  D A  V ++M++ G      T N L+   C++  + EA 
Sbjct: 226 LLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEAL 285

Query: 121 EIFCEMS-RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
               EMS R G  PD  +F+ L+   S+ G +  AL     M   G  PD   Y  +I+G
Sbjct: 286 RFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISG 345

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G V EA+K+ ++M+E+ C  + VTYNTI++ LC+   + EA  L   +  +G+ PD
Sbjct: 346 LCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPD 405

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ +LI G C   N   A+ L+  M  K   PD  TYN LID  C  G++++A  L  
Sbjct: 406 VCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLK 465

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M     + N I+Y  LI+G+C    + EA  ++ +M  +G+    V+ NT+I G C+S 
Sbjct: 466 EMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSE 525

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A + + +M+ EG+ PD  +YN+L+  F +  ++ KA  +V  M + G  PD++TY 
Sbjct: 526 RVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYG 585

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+ GR+  +  +L  +  KG+N     Y  +I     +   KEA R   EM+++
Sbjct: 586 TLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEK 645

Query: 480 GFVPD 484
              PD
Sbjct: 646 AEAPD 650



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 260/524 (49%), Gaps = 41/524 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAY-------------------- 40
           ++ ALC+ H+I  A + + EME  G+ PD  T+ T++  +                    
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG 260

Query: 41  ---------------CREGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRA 84
                          C+EG +EEA + +  MS + G  P  +T+N L+NGL K G    A
Sbjct: 261 CVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHA 320

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            EV+D ML+ G  PD  TYN+L+   C+   + EA ++  +M  R  +P+ V+++T+I  
Sbjct: 321 LEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIST 380

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC--RNGFVLEALKMRDEMLEKGCV 202
             +  Q++ A      +   G++PD   Y  +I G C  RN  V  A+++  EM  KGC 
Sbjct: 381 LCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTV--AMELYKEMKTKGCH 438

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D  TYN +++ LC    L EA +L  EM   G   +  T+ TLI G CK+  + +A  +
Sbjct: 439 PDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEI 498

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           FD M  + +  + VTYNTLIDG CK   +E+A++L   MI   + P+  +Y  L+  +C 
Sbjct: 499 FDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCK 558

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G + +A  +   M   G +P +V+  T+I G C++G    A + L  +  +G++    +
Sbjct: 559 AGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHA 618

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR-QGRMHDSELILWRM 441
           YN +I    R +   +A  L  +M  +   PD +TY ++  G C+  G + ++   +  M
Sbjct: 619 YNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEM 678

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +E+G  P+ S++  L  G  S   +    +  D ++++    D+
Sbjct: 679 LERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDN 722



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/461 (32%), Positives = 239/461 (51%), Gaps = 37/461 (8%)

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEM----------------------------- 91
            KP    +  +++ L K G  D  K++L EM                             
Sbjct: 85  FKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEIL 144

Query: 92  -------LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
                  ++ G+  +T  YN LL        +   E     M  RG+ PD+ +F+ LI  
Sbjct: 145 QFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKA 204

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             R  Q+  A++   EM+  GL+PD   +T I+ G+   G +  A++++++M+E GCV+ 
Sbjct: 205 LCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVT 264

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEM-LERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
            VT N ++NG C+   + EA     EM L  G FPD YTF  L++G  K G++  AL + 
Sbjct: 265 NVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVM 324

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D+M ++   PDI TYN+LI G CK+GE+++A K+   MI R  SPN ++Y  +I+  C  
Sbjct: 325 DMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKE 384

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             V EA +L   + GKGI P + + N++I+G C S + + A E   +M ++G  PD  +Y
Sbjct: 385 NQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTY 444

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N LI+       + +A  L+ +ME  G   +VITYN ++ GFC+  R+ ++E I  +M  
Sbjct: 445 NMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMEL 504

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +G++ +  TY TLI+G      ++EA +  D+M+  G  PD
Sbjct: 505 QGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPD 545



 Score = 41.6 bits (96), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 35/184 (19%), Positives = 72/184 (39%), Gaps = 1/184 (0%)

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           + ++SPN+    +L +              ++       KP+      ++    ++G+  
Sbjct: 47  ATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFD 106

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ-GLVPDVITYNVI 421
              + L +M       D+ S    I  +      ++    V  ME + G+V +   YN +
Sbjct: 107 AMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFL 166

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L       ++   E+    M+ +G+ PD ST+  LI      + ++ A    +EM   G 
Sbjct: 167 LNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGL 226

Query: 482 VPDD 485
           +PD+
Sbjct: 227 LPDE 230


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 170/540 (31%), Positives = 263/540 (48%), Gaps = 56/540 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLE------------- 47
           +++AL + +++D        M ++ V  D  TY+ LI A+CR G ++             
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251

Query: 48  --------EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD 99
                    A +L  SM  KGL P  +TY+ LI+GLCK  R + AK +L EM  +G+S D
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
             TY+ L+    +  N   A+ +  EM   G+      +   I + S+ G +++A   F 
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
            M ++GL+P    Y  +I GYCR   V +  ++  EM ++  V+   TY T++ G+C + 
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            L  A ++  EM+  G  P+   +TTLI    ++     A+ +   M ++ I PDI  YN
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           +LI G  K   M++A     +M+   + PN  +YG  I+GY        A +   EM   
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 340 GIKPTLVSCNTIIKGYCRSG-------------------DASK----------------A 364
           G+ P  V C  +I  YC+ G                   DA                  A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           +E   +M  +G+ PD  SY  LINGF +  NM KA ++  +M  +GL P+VI YN++L G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           FCR G +  ++ +L  M  KGL+P+  TY T+I+G+    +L EAFR  DEM  +G VPD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/518 (29%), Positives = 257/518 (49%), Gaps = 38/518 (7%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           + K+  ++ AK     M   G+ P    Y +LI  YCRE  + + ++L+  M  + +   
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
            +TY +++ G+C  G  D A  ++ EM+  G  P+   Y TL+    +     +A  +  
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM  +G+APDI  +++LI   S+  ++D A  +  EM   GL P+   Y   I+GY    
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
               A K   EM E G + + V    ++N  C+   + EA   +  M+++G+  D  T+T
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            L++G  K+  ++ A  +F  M  K I PD+ +Y  LI+GF K+G M+KA+ ++ +M+  
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            ++PN I Y +L+ G+C  G + +A  L  EM  KG+ P  V+  TII GYC+SGD ++A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF------------------ALVS-- 404
                +M  +G+ PDS  Y TL++G  R  ++++A                   AL++  
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWV 776

Query: 405 ----KMENQGLV--------------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
               K E +  V              P+ +TYN+++   C++G +  ++ +  +M    L
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P   TYT+L+NG+       E F   DE +  G  PD
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874



 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 249/488 (51%), Gaps = 5/488 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  +C    +D A   + EM   G  P+ V Y TLI  + +     +A +++  M  +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +F YNSLI GL K  R D A+  L EM++ GL P+  TY   +         + A+
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   EM   GV P+ V  + LI  + + G++  A   +R M   G++ D   YT+++NG 
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +N  V +A ++  EM  KG   DV +Y  ++NG  +   + +A  +F+EM+E G+ P+ 
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  L+ G C+ G + KA  L D M+ K + P+ VTY T+IDG+CK G++ +A +L+ +
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+   Y  L++G C +  V  A  + +    KG   +    N +I    + G 
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITI-FGTNKKGCASSTAPFNALINWVFKFGK 781

Query: 361 ASKADEFLSKMVSEGVD----PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
                E L++++    D    P+ ++YN +I+   +E N++ A  L  +M+N  L+P VI
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY  +L G+ + GR  +   +    I  G+ PD   Y+ +IN  + +    +A    D+M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 477 LQRGFVPD 484
             +  V D
Sbjct: 902 FAKNAVDD 909



 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 252/469 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +++ AK  L EM+  GV  D  TY+ LI+   +    + A  L++ M   G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +    + Y+  I  + K+G  ++AK + D M+  GL P    Y +L+   CR++N+ +  
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM +R +     ++ T++     +G LD A    +EM ++G  P+ V+YT +I  +
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +N    +A+++  EM E+G   D+  YN+++ GL +AK + EA     EM+E G+ P+ 
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+   I G+ +      A      M +  + P+ V    LI+ +CK G++ +A   +  
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + I  +  +Y +L+NG      V +A  ++ EM GKGI P + S   +I G+ + G+
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA     +MV EG+ P+ I YN L+ GF R   ++KA  L+ +M  +GL P+ +TY  
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           I+ G+C+ G + ++  +   M  KGL PD   YTTL++G    N+++ A
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 251/479 (52%), Gaps = 11/479 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K  ++D A+ FL EM + G+ P+  TY   I+ Y        A + +  M   G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P       LIN  CKKG+   A      M+  G+  D  TY  L+    + + + +AE
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF EM  +G+APD+ S+  LI  FS+ G + +A   F EM   GL P+ ++Y +++ G+
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G + +A ++ DEM  KG   + VTY TI++G C++  L EA  LF+EM  +G+ PD 
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA----NK 296
           + +TTL+ G C+  ++ +A+ +F    +K        +N LI+   K G+ E      N+
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L      R   PN ++Y I+I+  C  G++  A  L+++M    + PT+++  +++ GY 
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD-- 414
           + G  ++      + ++ G++PD I Y+ +IN F++E    KA  LV +M  +  V D  
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911

Query: 415 ---VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH-VSQNNLKEA 469
              + T   +L+GF + G M  +E ++  M+     PD +T   LIN   +S N   EA
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 225/501 (44%), Gaps = 49/501 (9%)

Query: 19  CEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKK 78
           C  E  G   D V +  L + Y  +G++EEA  + +S  G  L P +     L++ L + 
Sbjct: 140 CSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRW 199

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
            R D   +V   M++  +  D  TY+ L++  CR  N+   +++               F
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL--------------F 245

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
            T     +    +D AL     M   GLVP    Y ++I+G C+   + +A  +  EM  
Sbjct: 246 KTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS 305

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G  +D  TY+ +++GL + +    A  L +EM+  G+    Y +   I    K+G M K
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  LFD M    + P    Y +LI+G+C+   + +  +L  +M  R I  +  +YG ++ 
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G CS G +  A+ +  EM+  G +P +V   T+IK + ++     A   L +M  +G+ P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF------------- 425
           D   YN+LI G  + + MD+A + + +M   GL P+  TY   ++G+             
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545

Query: 426 ----------------------CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
                                 C++G++ ++      M+++G+  D  TYT L+NG    
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
           + + +A     EM  +G  PD
Sbjct: 606 DKVDDAEEIFREMRGKGIAPD 626



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 34/249 (13%)

Query: 257 NKALNLFD-IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI--------- 306
           +K L+ F+ + +QK  +  + +++ L    C  G  EKA  +   MI R           
Sbjct: 78  SKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSI 137

Query: 307 ----------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
                     S + + +GIL +GY + G++ EA  ++   +G  + P L  C  ++    
Sbjct: 138 VRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           R        +    MV   V  D  +Y+ LI    R  N+     ++ K E +       
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTA--- 254

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           T NV        G +   E     MI KGL P + TY  LI+G      L++A     EM
Sbjct: 255 TLNV-------DGALKLKE----SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303

Query: 477 LQRGFVPDD 485
              G   D+
Sbjct: 304 DSLGVSLDN 312


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 162/530 (30%), Positives = 262/530 (49%), Gaps = 46/530 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +   LCK+ K++  +  + +   KG  P+ V YNTLI+ YC+ G +E A  L   +  KG
Sbjct: 208 VTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKG 267

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS----------------------- 97
             P V TY ++IN  CKKG+ +   ++L EM + GL+                       
Sbjct: 268 FLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAA 327

Query: 98  ------------PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                       PD ATYNTL+  SC K  + EAEE+     RRG+ P+  S++ LI  F
Sbjct: 328 DAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAF 387

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S+NG+  RA     EM   G   D + Y  +++G    G V  AL +RD+M+E+G + D 
Sbjct: 388 SKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDA 447

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN +++GLC+      A  L  EML++ V PD +   TL+ G  + GN+++A  LF +
Sbjct: 448 NIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQL 507

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
             ++ I   +V  N +I G+CK G M  A   +  M +   SP+  +Y  +I+GY     
Sbjct: 508 TIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQND 567

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A R++  M+ K  KP +V+  ++I G+CR+GD ++A++   +M S G +P+ ++Y  
Sbjct: 568 LRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTI 627

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL--------- 436
           LI  F +E  + KA     +M     +P+  T+N ++ G      +  S           
Sbjct: 628 LIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLT 687

Query: 437 --ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                 MI  G +   + Y +++        +K A + HD+M+ +GF PD
Sbjct: 688 LEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPD 737



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 243/486 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L    K++ A+    EM  +    D  T   +    C+EG +EE   L+    GKG
Sbjct: 173 LLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKG 232

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +  YN+LI+G CK G  +RA  +  E+   G  P   TY  ++   C+K      +
Sbjct: 233 CVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVD 292

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  RG+A  +  F+ +I    ++G    A    R M  +G  PD   Y  +ING 
Sbjct: 293 KLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGS 352

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V EA ++ +  + +G   +  +Y  +++   +      A +L  EM ERG   D 
Sbjct: 353 CSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDL 412

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  L+HG    G ++ AL + D M ++ I PD   YN L+ G CK G    A +L  +
Sbjct: 413 IAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVE 472

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + ++P+      L++G+   G++ EA +L+   + +GI  ++V CN +IKGYC+ G 
Sbjct: 473 MLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGM 532

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A     +M +    PD  +Y+T+I+G+V++ ++  A  +   M  +   P+V+T+  
Sbjct: 533 MNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTS 592

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFCR G ++ +E +   M   G  P+  TYT LI     +  L +A  F ++ML   
Sbjct: 593 LINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINK 652

Query: 481 FVPDDA 486
            +P+DA
Sbjct: 653 CIPNDA 658



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 245/465 (52%), Gaps = 1/465 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS-MSGKGLKPGVFTYNSLINGLCKKG 79
           M+ K + P     + +I+AY   G ++EA +L N+ +      P VF  NSL+N L   G
Sbjct: 122 MKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHG 181

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + + A++V DEM+      D  T   +    C++  + E   +  +   +G  P+IV ++
Sbjct: 182 KVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYN 241

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TLI  + +NG ++RA + F+E+K  G +P    Y  +IN +C+ G      K+  EM E+
Sbjct: 242 TLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKER 301

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  + +  +N I++   +     EA D    M+E G  PD  T+ TLI+G C  G + +A
Sbjct: 302 GLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREA 361

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             L +   ++ + P+  +Y  LI  F K GE  +A++L  +M  R  + + I+YG L++G
Sbjct: 362 EELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHG 421

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
               G V  A  +  +M+ +GI P     N ++ G C+ G    A + L +M+ + V PD
Sbjct: 422 LVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPD 481

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +    TL++GF+R  N+D+A  L      +G+   V+  N ++ G+C+ G M+D+ L   
Sbjct: 482 AFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFK 541

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           RM     +PD  TY+T+I+G+V QN+L+ A R    ML++   P+
Sbjct: 542 RMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPN 586



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 159/350 (45%), Gaps = 46/350 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +  +AK  L EM  + V PD     TL++ + R G L+EA +L      +G
Sbjct: 453 LMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERG 512

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V   N++I G CK G  + A      M     SPD  TY+T++    ++ ++  A 
Sbjct: 513 IDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGAL 572

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M ++   P++V+F++LI  F RNG L+RA   F EM+S G  P+ V YTI+I  +
Sbjct: 573 RMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYF 632

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL------------------------- 215
           C+ G + +A    ++ML   C+ +  T+N ++NGL                         
Sbjct: 633 CKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFG 692

Query: 216 ---------------------CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
                                C+ KM+  A  L ++M+ +G  PD  +F  L+HG C +G
Sbjct: 693 MMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEG 752

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            +    N+      +      V Y+  +D F   G    A+ L   ++ +
Sbjct: 753 RLQDWNNVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTLVEK 802



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 19/110 (17%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR---------C 81
             YN+++   C+   ++ A QL + M  KG  P   ++ +L++GLC +GR         C
Sbjct: 704 AAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPC 763

Query: 82  D----------RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +          +  E LD+ L  GL+ D +     LVE  +  N  ++ +
Sbjct: 764 NFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTLVEKFKFHNQKKSHQ 813


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 157/481 (32%), Positives = 258/481 (53%), Gaps = 7/481 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LCK+ +I+ A  F+   E++G  PD VT+N L+N  CR G +++  ++M+ M  KG
Sbjct: 275 LVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKG 332

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  V+TYNSLI+GLCK G  D A E+L  M+     P+T TYNTL+   C++ ++  A 
Sbjct: 333 FELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAAT 392

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   ++ +GV PD+ +F++LI         + A+  F EMK  G  PD   Y+I+I   
Sbjct: 393 ELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESL 452

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EAL +  EM   GC  +VV YNT+++GLC+   + +A+D+F++M   GV    
Sbjct: 453 CSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSS 512

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI+G CK   + +A  L D M  + +KPD  TY T++  FC+ G++++A  +  +
Sbjct: 513 VTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQN 572

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P+ ++YG LI G C  G V  A +L   +  KG+  T  + N +I+  C+   
Sbjct: 573 MTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKR 632

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN-MDKAFALVSKMENQGLVPDVITYN 419
             +A     +M+ +G  PD I+Y  +  G       + +A     +M  +G++P+  ++ 
Sbjct: 633 TKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFG 692

Query: 420 VILTGFCRQGRMHDSELILWRMI-EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            +  G C    M D+ + L  M+ EKG      + T++I G +      +A      +L 
Sbjct: 693 FLAEGLCSLS-MEDTLIQLINMVMEKGRF--SQSETSIIRGFLKIQKFNDALANLGAILD 749

Query: 479 R 479
           R
Sbjct: 750 R 750



 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 253/485 (52%), Gaps = 3/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK H++  A + L +M   G+ PD  T+ TL+  +  E  +E A ++   M   G
Sbjct: 205 LIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESG 264

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    + N L+NGLCK+GR + A   + E  + G  PD  T+N L+   CR  ++ +  
Sbjct: 265 CELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGL 322

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M  +G   D+ ++++LI    + G++D A+     M S    P+ V Y  +I   
Sbjct: 323 EMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTL 382

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V  A ++   +  KG + DV T+N+++ GLC       A +LF EM E+G  PD 
Sbjct: 383 CKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDE 442

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LI   C +  + +AL L   M       ++V YNTLIDG CK   +  A  ++  
Sbjct: 443 FTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQ 502

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +S + ++Y  LING C    V EA +L  +M+ +G+KP   +  T++K +C+ GD
Sbjct: 503 MEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGD 562

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + +  M   G +PD ++Y TLI G  +   +D A  L+  ++ +G+V     YN 
Sbjct: 563 IKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNP 622

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           ++   C++ R  ++  +   M+EKG  PD  TY  +  G  +    ++EA  F  EML++
Sbjct: 623 VIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEK 682

Query: 480 GFVPD 484
           G +P+
Sbjct: 683 GILPE 687



 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 152/467 (32%), Positives = 237/467 (50%), Gaps = 2/467 (0%)

Query: 16  MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL 75
           +FL       V PDT  YN  ++   +   L+    L + M    + P V T+N LI  L
Sbjct: 150 LFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRAL 209

Query: 76  CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           CK  +   A  +L++M   GL PD  T+ TL+     + ++  A  I   M   G     
Sbjct: 210 CKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTS 269

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           VS + L+    + G+++ AL +  E    G  PD V +  ++NG CR G + + L+M D 
Sbjct: 270 VSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDF 327

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           MLEKG  +DV TYN++++GLC+   + EA ++ + M+ R   P+  T+ TLI   CK+ +
Sbjct: 328 MLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENH 387

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +  A  L  ++T K + PD+ T+N+LI G C     E A +L+ +M  +   P+  +Y I
Sbjct: 388 VEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSI 447

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LI   CS   + EA  L  EM   G    +V  NT+I G C++     A++   +M   G
Sbjct: 448 LIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLG 507

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           V   S++YNTLING  + + +++A  L+ +M  +GL PD  TY  +L  FC+QG +  + 
Sbjct: 508 VSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAA 567

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            I+  M   G  PD  TY TLI G      +  A +    +  +G V
Sbjct: 568 DIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMV 614



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 240/483 (49%), Gaps = 2/483 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ L K +K+   +    +M    V PD  T+N LI A C+   L  A  ++  M   GL
Sbjct: 171 LSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGL 230

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P   T+ +L+ G  ++   + A  + + M++ G    + + N L+   C++  + EA  
Sbjct: 231 RPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALR 290

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
              E    G  PD V+F+ L+    R G + + L     M   G   D   Y  +I+G C
Sbjct: 291 FIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC 348

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G + EA+++   M+ + C  + VTYNT++  LC+   +  A +L   +  +GV PD  
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVC 408

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           TF +LI G C   N   A+ LF+ M +K   PD  TY+ LI+  C    +++A  L  +M
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
                + N + Y  LI+G C    V +A  ++ +M   G+  + V+ NT+I G C+S   
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A + + +M+ EG+ PD  +Y T++  F ++ ++ +A  +V  M   G  PD++TY  +
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + G C+ GR+  +  +L  +  KG+      Y  +I     +   KEA R   EM+++G 
Sbjct: 589 IGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGD 648

Query: 482 VPD 484
            PD
Sbjct: 649 PPD 651



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 185/391 (47%), Gaps = 19/391 (4%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
            PD+++  +L   +  + N S    +F E+ R+                +R G  D  L 
Sbjct: 69  QPDSSSALSLFQWASAQPNYSAHPSVFHELLRQ---------------LARAGSFDSMLT 113

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM--DVVTYNTILNG 214
             R+M S+ +  D   + I +  Y  +  +   +     ++E+   +  D   YN  L+ 
Sbjct: 114 LLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSL 173

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           L +A  L   + L ++M+   V PD  TF  LI   CK   +  A+ + + M    ++PD
Sbjct: 174 LVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPD 233

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
             T+ TL+ GF +  ++E A ++   M+        +S  +L+NG C  G + EA R  Y
Sbjct: 234 EKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIY 293

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           E   +G  P  V+ N ++ G CR+G   +  E +  M+ +G + D  +YN+LI+G  +  
Sbjct: 294 E--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLG 351

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            +D+A  ++  M ++   P+ +TYN ++   C++  +  +  +   +  KG+ PD  T+ 
Sbjct: 352 EIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFN 411

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +LI G    +N + A    +EM ++G  PD+
Sbjct: 412 SLIQGLCLTSNREIAMELFEEMKEKGCDPDE 442


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 161/506 (31%), Positives = 265/506 (52%), Gaps = 25/506 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+   +    + L EME KG+ P  VTY TL++   R+G LE+   L++ M  + 
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V  YNS+I+ LCK     +A  VL +M   G  PD  T++TL+   C++  + EAE
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAE 419

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E +R  + P++ S+++LI  F   G++  A     EM   G  PD V +  +I+G 
Sbjct: 420 RLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGL 479

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V EAL +R++M  +  + D   YN +++GLC+ KML  A +L  EMLE+ V PD 
Sbjct: 480 VVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDK 539

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y +TTLI G  ++ ++++A  +F+ M QK I PD+V YN +I G+C+ G M +A +  + 
Sbjct: 540 YVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMST 599

Query: 301 MISRKIS--PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           M  RK+   P+  +Y  LI GY   G+++ A  L  +M+ +  +P +V+ +++I GYC+ 
Sbjct: 600 M--RKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKL 657

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           GD   A+     M S+G+ P+ I+Y  LI    +++ + +A      M      P+  T 
Sbjct: 658 GDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTL 717

Query: 419 NVILTGFCR------------------QGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
           + ++TG C                   +G + D   I   ++    +P  S Y  +I   
Sbjct: 718 HSLVTGLCNSMASIISSHCSSTVNLHGKGALLD---IFRALVNDRCDPRNSAYNAIIFSL 774

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDDA 486
              N L EA    ++M  +G+ PD A
Sbjct: 775 CIHNMLGEALDLKNKMANKGYKPDSA 800



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 243/474 (51%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D A+    EM  +    D  +   ++   C EG +E+  +L+ +  G G  P    YN L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I+G C++G   R   +L EM   GL P   TY TL+    RK ++ +   +  EM  R +
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P++  ++++I    +     +AL+  ++M + G  PD + ++ +I+G C+ G V EA +
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  E        ++ +Y ++++G C    +  A +L  EM+ERG  PD  TF  LIHG  
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
             G +++AL + + M  + + PD   YN LI G CK   +  A  L  +M+ + + P+  
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y  LI+G+     + EA +++  M  KGI P +V  N +IKGYC+ G  ++A E +S M
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTM 600

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
              G  PD  +Y TLI G+ ++ N+  A +L+  M  +   P+V+ Y+ ++ G+C+ G  
Sbjct: 601 RKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDT 660

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             +E +   M  +GL P+  TYT LI     ++ +  A  + + ML     P+D
Sbjct: 661 DAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPND 714



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 212/439 (48%), Gaps = 41/439 (9%)

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
           C RA+E        G  P     N LL     +    +A +++ EM       D  S   
Sbjct: 211 CQRARE------HHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCV 264

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++      G +++ L        AG VP+ V Y ++I+GYCR G V   + +  EM  KG
Sbjct: 265 MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKG 324

Query: 201 CVMDVVT-----------------------------------YNTILNGLCRAKMLTEAD 225
            +  VVT                                   YN++++ LC+ +  ++A 
Sbjct: 325 LLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQAL 384

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            +  +M   G  PD  TF+TLI G C++G + +A  L    T+  + P++ +Y +LI GF
Sbjct: 385 VVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGF 444

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  GE+  A+ L  +M+ R  +P+ +++G LI+G    G V+EA  +  +M  + + P  
Sbjct: 445 CVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDA 504

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
              N +I G C+      A   + +M+ + V PD   Y TLI+GF+R E++D+A  +   
Sbjct: 505 NIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEF 564

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ME +G+ PDV+ YN ++ G+C+ G M+++   +  M + G  PD  TYTTLI G+  Q N
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +  A     +M++R   P+
Sbjct: 625 ISGALSLLCDMMKRRCQPN 643



 Score = 45.4 bits (106), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 31/66 (46%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    YN +I + C    L EA  L N M+ KG KP   T+ SL+ G C  G+    + +
Sbjct: 762 PRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTI 821

Query: 88  LDEMLQ 93
           L    Q
Sbjct: 822 LPNEFQ 827


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 264/483 (54%), Gaps = 7/483 (1%)

Query: 3   NALCKDHKIDSAKMF----LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           +A C+D    + ++F     C   +    P   TYN LIN Y R    +    +   +  
Sbjct: 89  SAACRDVPALAVELFKRMDRCACPEAA--PTIYTYNILINCYRRARRPDLGLPVFGRLLR 146

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            GL P VF+YN+LI+G  K+G  D+A ++  +M + G+ P+  TY++L+   C+ + M +
Sbjct: 147 TGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDK 206

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           AE +  +M   GV P+ ++++ LI  +S +G    ++  F+EM S+ LVPD       + 
Sbjct: 207 AERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMT 266

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
             C++G + EA  + D M+ KG   DV++Y  +L+G   A  +   D+LFN M+  GV P
Sbjct: 267 ALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVP 326

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D + F TLI+ + + G M+K+L +F+ MT++ + PDI+T++T+I  FC++G ++ A + +
Sbjct: 327 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKF 386

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT-IIKGYCR 357
             MI   + P+   Y  LI G C+   + +A  L  +M+ KGI P  +   T II   C+
Sbjct: 387 NHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCK 446

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G  ++  + +  ++  G  P+ I++N+L++G+    NM +A  L+  ME+ G+ PD+ T
Sbjct: 447 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYT 506

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN ++ G+C+ GR+ D+  +   M+ K +     +Y  +++G         A     EM+
Sbjct: 507 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMI 566

Query: 478 QRG 480
           + G
Sbjct: 567 ESG 569



 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 268/520 (51%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  ++D A+  L +M   GV P+ +TYN LI+ Y   G  +E+ ++   MS   
Sbjct: 194 LINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSL 253

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY----------------- 103
           L P V   NS +  LCK GR   A+++ D M+  G  PD  +Y                 
Sbjct: 254 LVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMD 313

Query: 104 ------------------NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                             NTL+    R   M ++  +F +M+++GV PDI++FST+I  F
Sbjct: 314 NLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAF 373

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G+LD A+  F  M   G+ PD  +Y+ +I G C    +++A ++  +ML KG     
Sbjct: 374 CRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPC 433

Query: 206 VTYNT-ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + + T I+N LC+   + E  D+ + ++  G  P+  TF +L+ G+C  GNM +A+ L D
Sbjct: 434 IKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD 493

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M    ++PDI TYNTL+DG+CK G ++ A  L+ DM+ ++++   +SY I+++G     
Sbjct: 494 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQAR 553

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               A  +++EM+  G+  ++ +  T++ G CR+    +A+  L K+ S  V  D +++N
Sbjct: 554 RTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFN 613

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            +I    +     +A  L + +   GLVP ++TY V++T   ++    D++ +   M + 
Sbjct: 614 IVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKS 673

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              PD      +I   +++  + +A  +  ++ ++G +P+
Sbjct: 674 SCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE 713



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 247/470 (52%), Gaps = 1/470 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   +  + D        + + G+ PD  +YN LI+ + +EG +++A  L   M  +G
Sbjct: 124 LINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQG 183

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY+SLINGLCK    D+A+ VL +M+  G+ P+  TYN L+          E+ 
Sbjct: 184 IMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESV 243

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EMS   + PD+ + ++ +    ++G++  A   F  M   G  PD + Y  +++GY
Sbjct: 244 RVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGY 303

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G +     + + M+ +G V D   +NT++N   R  M+ ++  +F +M ++GV PD 
Sbjct: 304 ATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDI 363

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+T+I   C+ G ++ A+  F+ M    + PD   Y+ LI G C   ++ KA +L +D
Sbjct: 364 ITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISD 423

Query: 301 MISRKISPNYIS-YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           M+S+ I P  I  +  +IN  C  G V E   +   ++  G +P L++ N+++ GYC  G
Sbjct: 424 MLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG 483

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  +A   L  M S GV+PD  +YNTL++G+ +   +D A  L   M ++ +    ++YN
Sbjct: 484 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYN 543

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           +IL G  +  R   ++ +   MIE G+     TY T++ G    N   EA
Sbjct: 544 IILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA 593



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 221/399 (55%), Gaps = 6/399 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +   +D + +   +M ++GV PD +T++T+I+A+CR G L++A +  N M   G
Sbjct: 334 LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG 393

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES-CRKENMSEA 119
           + P    Y+ LI G C +    +AKE++ +ML  G+ P    + T ++ + C++  ++E 
Sbjct: 394 VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 453

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +++   +   G  P++++F++L+  +   G +  A+     M+S G+ PD   Y  +++G
Sbjct: 454 KDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDG 513

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC++G + +AL +  +ML K   +  V+YN IL+GL +A+    A ++F+EM+E G+   
Sbjct: 514 YCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVS 573

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+ T++ G C++   ++A  L + +   ++K DI+T+N +I    KVG  ++A +L+A
Sbjct: 574 IHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFA 633

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + P  ++Y ++I          +A  L+  M      P     N II+     G
Sbjct: 634 AISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKG 693

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLI-----NGFVRE 393
           + +KA  +LSK+  +G+ P++ + + LI     NG  RE
Sbjct: 694 EVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYRE 732



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 211/411 (51%), Gaps = 1/411 (0%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           +GV PD   +NTLINAY R G ++++  +   M+ +G+ P + T++++I+  C+ GR D 
Sbjct: 322 EGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDD 381

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF-STLI 142
           A E  + M+  G+ PDTA Y+ L+   C + ++ +A+E+  +M  +G+ P  + F +++I
Sbjct: 382 AMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSII 441

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               + G++         +   G  P+ + +  +++GYC  G + EA+ + D M   G  
Sbjct: 442 NNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVE 501

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D+ TYNT+++G C+   + +A  LF +ML + V     ++  ++HG  +      A  +
Sbjct: 502 PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEM 561

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  M +  +   I TY T++ G C+    ++AN L   + S  +  + +++ I+I     
Sbjct: 562 FHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 621

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +G   EA  L+  +   G+ PT+++   +I    +      AD   S M      PDS  
Sbjct: 622 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 681

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            N +I   + +  + KA   +SK++ +G++P+  T ++++  F   G+  +
Sbjct: 682 LNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYRE 732



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 201/413 (48%), Gaps = 46/413 (11%)

Query: 82  DRAKEVLDEMLQMGLSPDTAT-YNTLLVESCR-------KENMSEAEEIFCEMSRRG--- 130
           D A+ + DE+L    +P  A   N LL    R       ++  + A E+F  M R     
Sbjct: 54  DDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPE 113

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
            AP I +++ LI  + R  + D  L  F  +   GL P                      
Sbjct: 114 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGP---------------------- 151

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
                        DV +YN +++G  +   + +A DLF +M E+G+ P+  T+++LI+G 
Sbjct: 152 -------------DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGL 198

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK   M+KA  +   M    ++P+ +TYN LI G+   G  +++ +++ +M S  + P+ 
Sbjct: 199 CKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDV 258

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +    +   C  G + EA  ++  MV KG KP ++S   ++ GY  +G  +  D   + 
Sbjct: 259 GNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNV 318

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV EGV PD   +NTLIN + R   MDK+  +   M  QG+ PD+IT++ +++ FCR GR
Sbjct: 319 MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGR 378

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           + D+      MI+ G+ PD + Y+ LI G  ++ +L +A     +ML +G  P
Sbjct: 379 LDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPP 431



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 162/308 (52%), Gaps = 2/308 (0%)

Query: 181 CRN--GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           CR+     +E  K  D          + TYN ++N   RA+       +F  +L  G+ P
Sbjct: 92  CRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGP 151

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D +++  LI G  K+G ++KA +LF  M ++ I P++VTY++LI+G CK  EM+KA ++ 
Sbjct: 152 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 211

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+   + PN ++Y  LI+GY + G   E+ R++ EM    + P + +CN+ +   C+ 
Sbjct: 212 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 271

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A +    MV +G  PD ISY  L++G+     +     L + M  +G+VPD   +
Sbjct: 272 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 331

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N ++  + R G M  S L+   M ++G+NPD  T++T+I+       L +A    + M+ 
Sbjct: 332 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 391

Query: 479 RGFVPDDA 486
            G  PD A
Sbjct: 392 TGVPPDTA 399



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 167/371 (45%), Gaps = 36/371 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A C+  ++D A      M   GV PDT  Y+ LI   C    L +A +L++ M  KG
Sbjct: 369 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 428

Query: 61  LKPGVFTY-NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           + P    +  S+IN LCK+GR    K+V+D ++  G  P+  T+N+L+   C   NM EA
Sbjct: 429 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 488

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN- 178
             +   M   GV PDI +++TL+  + ++G++D AL  FR+M    +   +V Y II++ 
Sbjct: 489 VGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHG 548

Query: 179 ----------------------------------GYCRNGFVLEALKMRDEMLEKGCVMD 204
                                             G CRN    EA  + +++       D
Sbjct: 549 LFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFD 608

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           ++T+N ++  + +     EA +LF  +   G+ P   T+  +I    K+ +   A NLF 
Sbjct: 609 ILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFS 668

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M + S  PD    N +I      GE+ KA    + +  + I P   +  +LI  +   G
Sbjct: 669 SMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNG 728

Query: 325 HVTEAFRLWYE 335
              E  +L  E
Sbjct: 729 KYREYIKLLPE 739


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 142/420 (33%), Positives = 248/420 (59%), Gaps = 3/420 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G+     + N L++   + G + +   +   M  + ++P + ++N +INGLCK G+ ++A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKEN---MSEAEEIFCEMSRRGVAPDIVSFSTL 141
            +++++M   G+S +  TYNTL+   C+      M +A+ I  EM   G+ P+ V+F+ L
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F ++  +  A+  F EM   G+ P+ V Y  +ING C NG V EA  +RD+M+    
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             +++T+N +LNG C+ KM+ +A +LF++M ++G+ P+  T+  LI  +CKD NM  A  
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L+ IM  K + PD+ TYN LI G C+ G++E A  L ++M ++ +  + I+Y ILI+  C
Sbjct: 363 LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
           + G + +A RL  EM  KG+KP+ ++ NT+I GYC+ G+   A    S+M   G   +  
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVA 482

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +YN LI GF +++ ++ A  L+++M  +GL+P+ +TY ++      +G + D E  L+++
Sbjct: 483 TYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKV 542



 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 259/459 (56%), Gaps = 19/459 (4%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           +++  + L+ AY +       F+     S  GLK  V + N L++GL K G     + V 
Sbjct: 92  NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            EM++  + P   ++N ++   C+   +++A +I  +M  RGV+ ++++++TLI  + + 
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211

Query: 149 GQLDR---ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           G++ +   A    +EM++ G+ P+ V + I+I+G+C++  V  A+K+  EM  +G   +V
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYN+++NGLC    + EA  L ++M+   + P+  T   L++G CK+  + +A  LFD 
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++ I P++ TYN LID +CK   ME A  L+  M+ + + P+  +Y  LI G C  G 
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  L  EM  K +K  L++ N +I   C  G+  KA   L +M  +G+ P  ++YNT
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT 451

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+G+ +E N+  A  L S+ME  G + +V TYNV++ GFC++ ++ D+  +L  M+EKG
Sbjct: 452 MIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKG 511

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L P+R TY  +                 +EM+++GFVPD
Sbjct: 512 LIPNRMTYEIVT----------------EEMMEKGFVPD 534



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 235/403 (58%), Gaps = 8/403 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  +I   +    EM ++ + P  +++N +IN  C+ G L +A  ++  M  +G
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193

Query: 61  LKPGVFTYNSLINGLCKKGRCD---RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           +   V TYN+LI+G CK G+     +A  +L EM   G+ P+  T+N L+   C+ +N+S
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A ++F EM+R+GV P++V++++LI     NG+++ A     +M ++ L P+ + +  ++
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG+C+N  V +A ++ D+M ++G   +V TYN +++  C+ + + +A  L+  ML +GV 
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+  LI G C+ G++  A NL   M  K +K D++TYN LID  C  GEM+KA +L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M  + + P+ ++Y  +I+GYC  G++  A  L  +M   G    + + N +IKG+C+
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
                 A+  L++M+ +G+ P+ ++Y       V EE M+K F
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYE-----IVTEEMMEKGF 531



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 187/331 (56%), Gaps = 3/331 (0%)

Query: 1   MVNALCKDHKIDS---AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           +++  CK  KI     A   L EM   G+ P+ VT+N LI+ +C++  +  A ++   M+
Sbjct: 204 LIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMN 263

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            +G+KP V TYNSLINGLC  G+ + A  + D+M+   L P+  T+N LL   C+ + + 
Sbjct: 264 RQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVK 323

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A E+F +M ++G+ P++ +++ LI  + ++  ++ A   +R M   G+ PD   Y  +I
Sbjct: 324 QAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLI 383

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G CR G +  A  +  EM  K    D++TYN +++ LC    + +A  L +EM  +G+ 
Sbjct: 384 AGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLK 443

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P   T+ T+I G+CK+GN+  ALNL   M +     ++ TYN LI GFCK  ++E AN L
Sbjct: 444 PSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGL 503

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTE 328
             +M+ + + PN ++Y I+       G V +
Sbjct: 504 LNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 196/370 (52%), Gaps = 3/370 (0%)

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            E  +I   +S      + +    L+  +++N +       F+     GL         +
Sbjct: 75  QEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPL 134

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++G  + G + +   +  EM+ +     ++++N ++NGLC+   L +A D+  +M  RGV
Sbjct: 135 MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV 194

Query: 237 FPDFYTFTTLIHGHC---KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
             +  T+ TLI G+C   K G M KA  +   M    I P+ VT+N LIDGFCK   +  
Sbjct: 195 SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSA 254

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A K++A+M  + + PN ++Y  LING C+ G V EA  L  +MV   +KP +++ N ++ 
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLN 314

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G+C++    +A E    M  +G+ P+  +YN LI+ + ++ENM+ AFAL   M  +G+ P
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCP 374

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           DV TYN ++ G CR+G +  +  ++  M  K L  D  TY  LI+   ++  +K+A R  
Sbjct: 375 DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLL 434

Query: 474 DEMLQRGFVP 483
           DEM ++G  P
Sbjct: 435 DEMCRKGLKP 444



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 16/135 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC   ++  A   L EM +KG+ P  +TYNT+I+ YC+EG L  A  L + M   G
Sbjct: 417 LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V TYN LI G CKK + + A  +L+EML+ GL P+  TY                E
Sbjct: 477 RLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY----------------E 520

Query: 121 EIFCEMSRRGVAPDI 135
            +  EM  +G  PDI
Sbjct: 521 IVTEEMMEKGFVPDI 535


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 242/436 (55%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           A  L   +   G+ P +FT+N LIN  C     + A  ++ ++L+MG  PDT T+NTL+ 
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
             C    + EA      +   G   D  S+ TLI    + G+   AL   R++    +  
Sbjct: 147 GLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKI 206

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V+Y  II+  C++  V++A ++  +M+ K    DVVT++ ++ G C    L EA  LF
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            EM+ + + PD+YTF  L+   CK+GN+  A N+  +M ++ + P++VTY++L+DG+C V
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            ++ KA  +   +     +PN  SY  +ING+C +  V EA  L+ +M  KGI P  V+ 
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N++I G C+SG  S A E + +M   G   +  +YN LI+   +  ++D+A ALV K+++
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKD 446

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           QG+ PD+ T+N+++ G C+ GR+ +++ +   ++ KG + +  TY  ++NG   +    E
Sbjct: 447 QGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDE 506

Query: 469 AFRFHDEMLQRGFVPD 484
           A     +M   G +PD
Sbjct: 507 AEALLSKMDDNGIIPD 522



 Score =  267 bits (682), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 249/444 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +++ A   + ++ + G  PDT+T+NTLI   C  G ++EA    + +   G
Sbjct: 109 LINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALG 168

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                F+Y +LINGLCK G    A ++L ++    +  +   YNT++   C+ + + +A 
Sbjct: 169 FHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAY 228

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++ +M  + ++PD+V+FS LI  F   GQL+ A   FREM    + PD   + I+++  
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDAL 288

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A  M   M+++G + +VVTY+++++G C    + +A  + N + + G  P+ 
Sbjct: 289 CKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNA 348

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++ T+I+G CK   +++AL+LF+ M  K I PD VTYN+LIDG CK G +  A +L  +
Sbjct: 349 HSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDE 408

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M       N  +Y  LI+  C   HV +A  L  ++  +GI+P + + N +I G C+ G 
Sbjct: 409 MHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGR 468

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +    ++S+G   ++ +YN ++NG  +E   D+A AL+SKM++ G++PD +TY  
Sbjct: 469 LKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYET 528

Query: 421 ILTGFCRQGRMHDSELILWRMIEK 444
           ++     +     +E +L  MI +
Sbjct: 529 LIQALFHKDENEKAEKLLREMIAR 552



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 246/462 (53%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           +E  G+ PD  T+N LIN YC    +  AF +M  +   G +P   T+N+LI GLC  G+
Sbjct: 94  LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A    D +L +G   D  +Y TL+   C+      A ++  ++  + V  ++V ++T
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I    ++  +  A   + +M +  + PD V ++ +I G+C  G + EA  +  EM+ K 
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D  T+N +++ LC+   L  A ++   M++ GV P+  T+++L+ G+C    +NKA 
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           ++ + ++Q    P+  +Y T+I+GFCK+  +++A  L+ DM  + I+P+ ++Y  LI+G 
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGL 393

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G ++ A+ L  EM   G    + + N +I   C++    +A   + K+  +G+ PD 
Sbjct: 394 CKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDM 453

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            ++N LI G  +   +  A  +   + ++G   +  TYN+++ G C++G   ++E +L +
Sbjct: 454 YTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSK 513

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           M + G+ PD  TY TLI     ++  ++A +   EM+ R  V
Sbjct: 514 MDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 216/376 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +  +A   L +++ K V  + V YNT+I++ C+   + +A++L + M  K 
Sbjct: 179 LINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKK 238

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+++LI G C  G+ + A  +  EM+   ++PD  T+N L+   C++ N+  A+
Sbjct: 239 ISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAK 298

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M + GV P++V++S+L+  +    Q+++A      +   G  P+   Y  +ING+
Sbjct: 299 NMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGF 358

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EAL + ++M  KG   D VTYN++++GLC++  ++ A +L +EM + G   + 
Sbjct: 359 CKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANI 418

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  LI   CK+ ++++A+ L   +  + I+PD+ T+N LI G CKVG ++ A  ++ D
Sbjct: 419 FTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQD 478

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++S+  S N  +Y I++NG C  G   EA  L  +M   GI P  V+  T+I+      +
Sbjct: 479 LLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDE 538

Query: 361 ASKADEFLSKMVSEGV 376
             KA++ L +M++  V
Sbjct: 539 NEKAEKLLREMIARDV 554



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 195/363 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCK   +  A     +M  K + PD VT++ LI  +C  G LEEAF L   M  K 
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T+N L++ LCK+G    AK +L  M++ G+ P+  TY++L+   C    +++A+
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   +S+ G AP+  S+ T+I  F +   +D AL  F +M+  G+ PD V Y  +I+G 
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGL 393

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  A ++ DEM + G   ++ TYN +++ LC+   + +A  L  ++ ++G+ PD 
Sbjct: 394 CKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDM 453

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF  LI+G CK G +  A ++F  +  K    +  TYN +++G CK G  ++A  L + 
Sbjct: 454 YTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSK 513

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I P+ ++Y  LI          +A +L  EM+ + +   L     ++     + D
Sbjct: 514 MDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEMVLHLESEAKD 573

Query: 361 ASK 363
             K
Sbjct: 574 QEK 576



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 196/361 (54%), Gaps = 4/361 (1%)

Query: 123 FCEMSRRGVAPDIVSFSTLIG--IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           F  + R      I+ F+ ++G  + S N     A+   R ++  G+ PD   + I+IN Y
Sbjct: 54  FNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCY 113

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    +  A  M  ++L+ G   D +T+NT++ GLC    + EA    + +L  G   D 
Sbjct: 114 CHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQ 173

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++ TLI+G CK G    AL +   +  K +K ++V YNT+ID  CK   +  A +L++ 
Sbjct: 174 FSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQ 233

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI++KISP+ +++  LI G+C +G + EAF L+ EMV K I P   + N ++   C+ G+
Sbjct: 234 MIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGN 293

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   L  M+ EGV P+ ++Y++L++G+     ++KA  +++ +   G  P+  +Y  
Sbjct: 294 LKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCT 353

Query: 421 ILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++ GFC+  +M D  L L+  ++ KG+ PD+ TY +LI+G      +  A+   DEM   
Sbjct: 354 MINGFCKI-KMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDN 412

Query: 480 G 480
           G
Sbjct: 413 G 413



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 35/195 (17%)

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           H   A  L   +   GI P + + N +I  YC   + + A   ++K++  G +PD+I++N
Sbjct: 83  HYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFN 142

Query: 385 TLI-----NGFVREE------------NMDK------------------AFALVSKMENQ 409
           TLI     NG V+E             ++D+                  A  ++ K++ +
Sbjct: 143 TLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGK 202

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            +  +V+ YN I+   C+   + D+  +  +MI K ++PD  T++ LI G      L+EA
Sbjct: 203 LVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEA 262

Query: 470 FRFHDEMLQRGFVPD 484
           F    EM+ +   PD
Sbjct: 263 FGLFREMVLKNINPD 277


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 264/483 (54%), Gaps = 7/483 (1%)

Query: 3   NALCKDHKIDSAKMF----LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           +A C+D    + ++F     C   +    P   TYN LIN Y R    +    +   +  
Sbjct: 160 SAACRDVPALAVELFKRMDRCACPEAA--PTIYTYNILINCYRRARRPDLGLPVFGRLLR 217

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            GL P VF+YN+LI+G  K+G  D+A ++  +M + G+ P+  TY++L+   C+ + M +
Sbjct: 218 TGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDK 277

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           AE +  +M   GV P+ ++++ LI  +S +G    ++  F+EM S+ LVPD       + 
Sbjct: 278 AERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMT 337

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
             C++G + EA  + D M+ KG   DV++Y  +L+G   A  +   D+LFN M+  GV P
Sbjct: 338 ALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVP 397

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D + F TLI+ + + G M+K+L +F+ MT++ + PDI+T++T+I  FC++G ++ A + +
Sbjct: 398 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKF 457

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT-IIKGYCR 357
             MI   + P+   Y  LI G C+   + +A  L  +M+ KGI P  +   T II   C+
Sbjct: 458 NHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCK 517

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G  ++  + +  ++  G  P+ I++N+L++G+    NM +A  L+  ME+ G+ PD+ T
Sbjct: 518 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYT 577

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN ++ G+C+ GR+ D+  +   M+ K +     +Y  +++G         A     EM+
Sbjct: 578 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMI 637

Query: 478 QRG 480
           + G
Sbjct: 638 ESG 640



 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 268/520 (51%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  ++D A+  L +M   GV P+ +TYN LI+ Y   G  +E+ ++   MS   
Sbjct: 265 LINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSL 324

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY----------------- 103
           L P V   NS +  LCK GR   A+++ D M+  G  PD  +Y                 
Sbjct: 325 LVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMD 384

Query: 104 ------------------NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                             NTL+    R   M ++  +F +M+++GV PDI++FST+I  F
Sbjct: 385 NLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAF 444

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G+LD A+  F  M   G+ PD  +Y+ +I G C    +++A ++  +ML KG     
Sbjct: 445 CRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPC 504

Query: 206 VTYNT-ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + + T I+N LC+   + E  D+ + ++  G  P+  TF +L+ G+C  GNM +A+ L D
Sbjct: 505 IKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD 564

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M    ++PDI TYNTL+DG+CK G ++ A  L+ DM+ ++++   +SY I+++G     
Sbjct: 565 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQAR 624

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               A  +++EM+  G+  ++ +  T++ G CR+    +A+  L K+ S  V  D +++N
Sbjct: 625 RTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFN 684

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            +I    +     +A  L + +   GLVP ++TY V++T   ++    D++ +   M + 
Sbjct: 685 IVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKS 744

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              PD      +I   +++  + +A  +  ++ ++G +P+
Sbjct: 745 SCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE 784



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 247/470 (52%), Gaps = 1/470 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   +  + D        + + G+ PD  +YN LI+ + +EG +++A  L   M  +G
Sbjct: 195 LINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQG 254

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY+SLINGLCK    D+A+ VL +M+  G+ P+  TYN L+          E+ 
Sbjct: 255 IMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESV 314

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EMS   + PD+ + ++ +    ++G++  A   F  M   G  PD + Y  +++GY
Sbjct: 315 RVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGY 374

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G +     + + M+ +G V D   +NT++N   R  M+ ++  +F +M ++GV PD 
Sbjct: 375 ATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDI 434

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+T+I   C+ G ++ A+  F+ M    + PD   Y+ LI G C   ++ KA +L +D
Sbjct: 435 ITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISD 494

Query: 301 MISRKISPNYIS-YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           M+S+ I P  I  +  +IN  C  G V E   +   ++  G +P L++ N+++ GYC  G
Sbjct: 495 MLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG 554

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  +A   L  M S GV+PD  +YNTL++G+ +   +D A  L   M ++ +    ++YN
Sbjct: 555 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYN 614

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           +IL G  +  R   ++ +   MIE G+     TY T++ G    N   EA
Sbjct: 615 IILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA 664



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 221/399 (55%), Gaps = 6/399 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +   +D + +   +M ++GV PD +T++T+I+A+CR G L++A +  N M   G
Sbjct: 405 LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG 464

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES-CRKENMSEA 119
           + P    Y+ LI G C +    +AKE++ +ML  G+ P    + T ++ + C++  ++E 
Sbjct: 465 VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 524

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +++   +   G  P++++F++L+  +   G +  A+     M+S G+ PD   Y  +++G
Sbjct: 525 KDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDG 584

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC++G + +AL +  +ML K   +  V+YN IL+GL +A+    A ++F+EM+E G+   
Sbjct: 585 YCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVS 644

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+ T++ G C++   ++A  L + +   ++K DI+T+N +I    KVG  ++A +L+A
Sbjct: 645 IHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFA 704

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + P  ++Y ++I          +A  L+  M      P     N II+     G
Sbjct: 705 AISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKG 764

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLI-----NGFVRE 393
           + +KA  +LSK+  +G+ P++ + + LI     NG  RE
Sbjct: 765 EVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYRE 803



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 211/411 (51%), Gaps = 1/411 (0%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           +GV PD   +NTLINAY R G ++++  +   M+ +G+ P + T++++I+  C+ GR D 
Sbjct: 393 EGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDD 452

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF-STLI 142
           A E  + M+  G+ PDTA Y+ L+   C + ++ +A+E+  +M  +G+ P  + F +++I
Sbjct: 453 AMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSII 512

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               + G++         +   G  P+ + +  +++GYC  G + EA+ + D M   G  
Sbjct: 513 NNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVE 572

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D+ TYNT+++G C+   + +A  LF +ML + V     ++  ++HG  +      A  +
Sbjct: 573 PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEM 632

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  M +  +   I TY T++ G C+    ++AN L   + S  +  + +++ I+I     
Sbjct: 633 FHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 692

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +G   EA  L+  +   G+ PT+++   +I    +      AD   S M      PDS  
Sbjct: 693 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 752

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            N +I   + +  + KA   +SK++ +G++P+  T ++++  F   G+  +
Sbjct: 753 LNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYRE 803



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 172/317 (54%)

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            P    Y I+IN Y R       L +   +L  G   DV +YN +++G  +   + +A D
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           LF +M E+G+ P+  T+++LI+G CK   M+KA  +   M    ++P+ +TYN LI G+ 
Sbjct: 246 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 305

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
             G  +++ +++ +M S  + P+  +    +   C  G + EA  ++  MV KG KP ++
Sbjct: 306 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 365

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           S   ++ GY  +G  +  D   + MV EGV PD   +NTLIN + R   MDK+  +   M
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 425

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
             QG+ PD+IT++ +++ FCR GR+ D+      MI+ G+ PD + Y+ LI G  ++ +L
Sbjct: 426 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDL 485

Query: 467 KEAFRFHDEMLQRGFVP 483
            +A     +ML +G  P
Sbjct: 486 VKAKELISDMLSKGIPP 502



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 163/311 (52%), Gaps = 2/311 (0%)

Query: 178 NGYCRN--GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +  CR+     +E  K  D          + TYN ++N   RA+       +F  +L  G
Sbjct: 160 SAACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTG 219

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + PD +++  LI G  K+G ++KA +LF  M ++ I P++VTY++LI+G CK  EM+KA 
Sbjct: 220 LGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAE 279

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           ++   M+   + PN ++Y  LI+GY + G   E+ R++ EM    + P + +CN+ +   
Sbjct: 280 RVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTAL 339

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+ G   +A +    MV +G  PD ISY  L++G+     +     L + M  +G+VPD 
Sbjct: 340 CKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDR 399

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
             +N ++  + R G M  S L+   M ++G+NPD  T++T+I+       L +A    + 
Sbjct: 400 HVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNH 459

Query: 476 MLQRGFVPDDA 486
           M+  G  PD A
Sbjct: 460 MIDTGVPPDTA 470



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 167/371 (45%), Gaps = 36/371 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A C+  ++D A      M   GV PDT  Y+ LI   C    L +A +L++ M  KG
Sbjct: 440 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 499

Query: 61  LKPGVFTY-NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           + P    +  S+IN LCK+GR    K+V+D ++  G  P+  T+N+L+   C   NM EA
Sbjct: 500 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 559

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN- 178
             +   M   GV PDI +++TL+  + ++G++D AL  FR+M    +   +V Y II++ 
Sbjct: 560 VGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHG 619

Query: 179 ----------------------------------GYCRNGFVLEALKMRDEMLEKGCVMD 204
                                             G CRN    EA  + +++       D
Sbjct: 620 LFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFD 679

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           ++T+N ++  + +     EA +LF  +   G+ P   T+  +I    K+ +   A NLF 
Sbjct: 680 ILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFS 739

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M + S  PD    N +I      GE+ KA    + +  + I P   +  +LI  +   G
Sbjct: 740 SMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNG 799

Query: 325 HVTEAFRLWYE 335
              E  +L  E
Sbjct: 800 KYREYIKLLPE 810


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 157/494 (31%), Positives = 258/494 (52%), Gaps = 13/494 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +D AK F C + + G+ P   ++N LIN  C  G + EA +L + M+  G
Sbjct: 270 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 329

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TYN L  G    G    A EV+ +ML  GLSPD  TY  LL   C+  N+    
Sbjct: 330 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 389

Query: 121 EIFCEMSRRGVAPD-IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M  RG   + I+  S ++    + G++D AL  F +MK+ GL PD V Y+I+I+G
Sbjct: 390 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 449

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G    AL + DEM +K  + +  T+  +L GLC+  ML EA  L + ++  G   D
Sbjct: 450 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 509

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I G+ K G + +AL LF ++ +  I P + T+N+LI G+CK   + +A K+  
Sbjct: 510 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 569

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    ++P+ +SY  L++ Y + G+      L  EM  +GI PT V+ + I KG CR  
Sbjct: 570 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 629

Query: 360 DA------------SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
                          K  + L  M SEG+ PD I+YNT+I    R +++  AF  +  M+
Sbjct: 630 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 689

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           ++ L     TYN+++   C  G +  ++  ++ + E+ ++  +  YTTLI  H  + + +
Sbjct: 690 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 749

Query: 468 EAFRFHDEMLQRGF 481
            A +   ++L RGF
Sbjct: 750 MAVKLFHQLLHRGF 763



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 233/458 (50%), Gaps = 10/458 (2%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR-CDRAKEVLD 89
           + ++ L+    R   ++++  ++  M  + L     +YNS++    +  +  D  KE+ D
Sbjct: 167 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 226

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +        +  TY+T++   CR++ + +A         + + P +VSF++++  + + G
Sbjct: 227 K--------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG 278

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +D A  +F  +   GLVP    + I+ING C  G + EAL++  +M + G   D VTYN
Sbjct: 279 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 338

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +  G     M++ A ++  +ML++G+ PD  T+T L+ G C+ GN++  L L   M  +
Sbjct: 339 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 398

Query: 270 SIKPD-IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + + I+  + ++ G CK G +++A  L+  M +  +SP+ ++Y I+I+G C +G    
Sbjct: 399 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 458

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+ EM  K I P   +   ++ G C+ G   +A   L  ++S G   D + YN +I+
Sbjct: 459 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 518

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ +   +++A  L   +   G+ P V T+N ++ G+C+   + ++  IL  +   GL P
Sbjct: 519 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 578

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              +YTTL++ + +  N K       EM   G  P + 
Sbjct: 579 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 616



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 218/457 (47%), Gaps = 23/457 (5%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVT-YNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           C+   ID   + L +M  +G   +++   + +++  C+ G ++EA  L N M   GL P 
Sbjct: 380 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 439

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           +  Y+ +I+GLCK G+ D A  + DEM    + P++ T+  LL+  C+K  + EA  +  
Sbjct: 440 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 499

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            +   G   DIV ++ +I  ++++G ++ AL  F+ +   G+ P    +  +I GYC+  
Sbjct: 500 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 559

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA K+ D +   G    VV+Y T+++           D+L  EM   G+ P   T++
Sbjct: 560 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYS 619

Query: 245 TLIHGHC---KDGNMNKALN--LFDI-------MTQKSIKPDIVTYNTLIDGFCKVGEME 292
            +  G C   K  N N  L   +F+        M  + I PD +TYNT+I   C+V  + 
Sbjct: 620 VIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS 679

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
            A      M SR +  +  +Y ILI+  C  G++ +A    Y +  + +  +  +  T+I
Sbjct: 680 GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 739

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
           K +C  GD   A +   +++  G +     Y+ +IN   R   ++++      M +QG+ 
Sbjct: 740 KAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGIS 799

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           PD+    V++            EL+ W  I+ GL PD
Sbjct: 800 PDLDICEVMIKS---------DELLSW-TIKWGLLPD 826



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 201/426 (47%), Gaps = 22/426 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  +ID A     +M+  G+ PD V Y+ +I+  C+ G  + A  L + M  K 
Sbjct: 411 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 470

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ GLC+KG    A+ +LD ++  G + D   YN ++    +   + EA 
Sbjct: 471 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 530

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  +   G+ P + +F++LI  + +   +  A      +K  GL P  V YT +++ Y
Sbjct: 531 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 590

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA------------KMLTEADDLF 228
              G      ++R EM  +G     VTY+ I  GLCR             ++  +     
Sbjct: 591 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 650

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M   G+ PD  T+ T+I   C+  +++ A    +IM  +++     TYN LID  C  
Sbjct: 651 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 710

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G + KA+     +  + +S +  +Y  LI  +C  G    A +L+++++ +G   ++   
Sbjct: 711 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 770

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           + +I   CR    +++  F   M+S+G+ PD              E M K+  L+S    
Sbjct: 771 SAVINRLCRRHLVNESKFFFCLMLSQGISPD----------LDICEVMIKSDELLSWTIK 820

Query: 409 QGLVPD 414
            GL+PD
Sbjct: 821 WGLLPD 826


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 157/494 (31%), Positives = 258/494 (52%), Gaps = 13/494 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +D AK F C + + G+ P   ++N LIN  C  G + EA +L + M+  G
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TYN L  G    G    A EV+ +ML  GLSPD  TY  LL   C+  N+    
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347

Query: 121 EIFCEMSRRGVAPD-IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M  RG   + I+  S ++    + G++D AL  F +MK+ GL PD V Y+I+I+G
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G    AL + DEM +K  + +  T+  +L GLC+  ML EA  L + ++  G   D
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I G+ K G + +AL LF ++ +  I P + T+N+LI G+CK   + +A K+  
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    ++P+ +SY  L++ Y + G+      L  EM  +GI PT V+ + I KG CR  
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587

Query: 360 DA------------SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
                          K  + L  M SEG+ PD I+YNT+I    R +++  AF  +  M+
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           ++ L     TYN+++   C  G +  ++  ++ + E+ ++  +  YTTLI  H  + + +
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707

Query: 468 EAFRFHDEMLQRGF 481
            A +   ++L RGF
Sbjct: 708 MAVKLFHQLLHRGF 721



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 233/458 (50%), Gaps = 10/458 (2%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR-CDRAKEVLD 89
           + ++ L+    R   ++++  ++  M  + L     +YNS++    +  +  D  KE+ D
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 184

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +        +  TY+T++   CR++ + +A         + + P +VSF++++  + + G
Sbjct: 185 K--------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG 236

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +D A  +F  +   GLVP    + I+ING C  G + EAL++  +M + G   D VTYN
Sbjct: 237 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +  G     M++ A ++  +ML++G+ PD  T+T L+ G C+ GN++  L L   M  +
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356

Query: 270 SIKPD-IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + + I+  + ++ G CK G +++A  L+  M +  +SP+ ++Y I+I+G C +G    
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 416

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+ EM  K I P   +   ++ G C+ G   +A   L  ++S G   D + YN +I+
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ +   +++A  L   +   G+ P V T+N ++ G+C+   + ++  IL  +   GL P
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 536

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              +YTTL++ + +  N K       EM   G  P + 
Sbjct: 537 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 195/405 (48%), Gaps = 13/405 (3%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVT-YNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           C+   ID   + L +M  +G   +++   + +++  C+ G ++EA  L N M   GL P 
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           +  Y+ +I+GLCK G+ D A  + DEM    + P++ T+  LL+  C+K  + EA  +  
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            +   G   DIV ++ +I  ++++G ++ AL  F+ +   G+ P    +  +I GYC+  
Sbjct: 458 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA K+ D +   G    VV+Y T+++           D+L  EM   G+ P   T++
Sbjct: 518 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYS 577

Query: 245 TLIHGHC---KDGNMNKALN--LFDI-------MTQKSIKPDIVTYNTLIDGFCKVGEME 292
            +  G C   K  N N  L   +F+        M  + I PD +TYNT+I   C+V  + 
Sbjct: 578 VIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS 637

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
            A      M SR +  +  +Y ILI+  C  G++ +A    Y +  + +  +  +  T+I
Sbjct: 638 GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 697

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
           K +C  GD   A +   +++  G +     Y+ +IN   R   M+
Sbjct: 698 KAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 177/369 (47%), Gaps = 12/369 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  +ID A     +M+  G+ PD V Y+ +I+  C+ G  + A  L + M  K 
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ GLC+KG    A+ +LD ++  G + D   YN ++    +   + EA 
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  +   G+ P + +F++LI  + +   +  A      +K  GL P  V YT +++ Y
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA------------KMLTEADDLF 228
              G      ++R EM  +G     VTY+ I  GLCR             ++  +     
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 608

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M   G+ PD  T+ T+I   C+  +++ A    +IM  +++     TYN LID  C  
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G + KA+     +  + +S +  +Y  LI  +C  G    A +L+++++ +G   ++   
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 728

Query: 349 NTIIKGYCR 357
           + +I   CR
Sbjct: 729 SAVINRLCR 737



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 11/202 (5%)

Query: 3   NALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK 62
           N + ++   +  K  L +ME +G+ PD +TYNT+I   CR   L  AF  +  M  + L 
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
               TYN LI+ LC  G   +A   +  + +  +S     Y TL+   C K +   A ++
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 712

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV-----PDNVLYTIII 177
           F ++  RG    I  +S +I    R     R LM     +S G+        + +Y  I+
Sbjct: 713 FHQLLHRGFNVSIRDYSAVINRLCR-----RHLMNCFPGQSNGVCCLISNERSFVYCPIL 767

Query: 178 NGYCRNGFVLEALKMRDEMLEK 199
           +  CR    L   K+  E+L K
Sbjct: 768 SANCRR-HTLSVEKLSHEVLLK 788



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 59/117 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+   +  A +FL  M+ + +   + TYN LI++ C  G++ +A   + S+  + 
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           +    F Y +LI   C KG  + A ++  ++L  G +     Y+ ++   CR+  M+
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 257/462 (55%), Gaps = 5/462 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ LCK  KI+ A    C   Q+ +      Y+ LI      G +++A +    ++G+ +
Sbjct: 312 LSGLCKSGKIEQA-FEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNI 370

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P   T +S+I  LCK GR D A  +L+ M++ G  PD AT++ L+ E C+ + + EA+E
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE 430

Query: 122 IFCEMSRR--GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA-GLVPDNVLYTIIIN 178
               M R+    +    S+++L+    +  ++ +A   F  M S    VPD V Y+I+I+
Sbjct: 431 FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILID 490

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C+   +  A K+  +M++  CV +V TYN  LNGL R   + +A  ++ EM+  G  P
Sbjct: 491 GFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSP 550

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T++TLIHG       ++A  LF+ M  +  +P+ VTYN L+ G CK  + ++A++L+
Sbjct: 551 DVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 610

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+ R   P+ ++Y  L+ G+C++G + +A  ++ EMV KG  P +V+ N ++KG+ R+
Sbjct: 611 RKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 670

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME-NQGLVPDVIT 417
           G   +A +    MVS    PD++S+N +I+G  + + +D A  +  +ME + G  PD++T
Sbjct: 671 GKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVT 730

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           YN ++ G C + R+ ++  +   +    L+PD   +  L+  
Sbjct: 731 YNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 255/492 (51%), Gaps = 13/492 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN + +D  I+++K+F   M + G  PD   Y+ ++ A+C+   L+EAF+L   M+ + 
Sbjct: 241 LVNFVIQDKAIEASKLFRA-MVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVES 299

Query: 61  LKP-GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN---TLLVESCRKENM 116
             P     + + ++GLCK G+ ++A E    M Q  LS     Y+    LL+ES R   +
Sbjct: 300 KAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGR---I 355

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +AEE   E++ R + P   +  ++I    + G++D AL     M   G  PD   ++++
Sbjct: 356 DKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSML 415

Query: 177 INGYCRNGFVLEALKMRDEMLEK--GCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-E 233
           IN  C+   + EA +    M  K         +YN++LN LC+AK + +A  +F+ M+ E
Sbjct: 416 INELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSE 475

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           R   PD  +++ LI G CK   + +A  L+  M   +  P++ TYN  ++G  + G +  
Sbjct: 476 RSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIAD 535

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  ++ +M++   SP+ I+Y  LI+G+       +A  L+  M+ +G +P  V+ N ++ 
Sbjct: 536 AQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLH 595

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G C+     +A E   KMV  G DPD ++Y TL+ GF     +++A  +  +M ++G  P
Sbjct: 596 GLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDP 655

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           DV+ YN +L GF R G+  +++ +   M+ +   PD  ++  +I+G      L +A    
Sbjct: 656 DVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVF 715

Query: 474 DEMLQ-RGFVPD 484
           + M Q  G  PD
Sbjct: 716 ERMEQDHGCSPD 727



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 249/489 (50%), Gaps = 6/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYP-DTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           MV A CK   +D A     EM  +   P + V +   ++  C+ G +E+AF+   +M  +
Sbjct: 275 MVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-E 333

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            L      Y+ LI  L + GR D+A+E   E+    + P + T ++++ E C+   +  A
Sbjct: 334 SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSA 393

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYTIII 177
             +   M +RG  PD+ + S LI    +  ++  A  + + M  K +        Y  ++
Sbjct: 394 LSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLL 453

Query: 178 NGYCRNGFVLEALKMRDEML-EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           N  C+   V +A  +   M+ E+  V DVV+Y+ +++G C+   L  A+ L+ +M++   
Sbjct: 454 NSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 513

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+  T+   ++G  + G +  A  +++ M      PD++TY+TLI GF    + ++A++
Sbjct: 514 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHE 573

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+  MISR   PN ++Y  L++G C      EA  L+ +MV +G  P  V+  T++ G+C
Sbjct: 574 LFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFC 633

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
             G   +A E   +MVS+G DPD ++YN L+ GF R     +A  L   M ++   PD +
Sbjct: 634 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTV 693

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           ++N+++ G  +  R+ D+  +  RM +  G +PD  TY +LI G   +  L EA +   E
Sbjct: 694 SHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKE 753

Query: 476 MLQRGFVPD 484
           + +    PD
Sbjct: 754 IDRLKLSPD 762



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/557 (25%), Positives = 258/557 (46%), Gaps = 73/557 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +   +  A     +M  +GV P+  TY  L+ + C E   +EA +    M  KG
Sbjct: 135 LLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKG 194

Query: 61  LKPGVFTYNSL---INGLCKKGRCDR--------------------------------AK 85
            KP    Y  +   +    K+G   R                                A 
Sbjct: 195 FKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEAS 254

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP-DIVSFSTLIGI 144
           ++   M++ G  PD   Y+ +++  C+ EN+ EA ++F EM+    AP + V+++  +  
Sbjct: 255 KLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSG 314

Query: 145 FSRNGQLDRALMYFREMK----SAGLVPDNVLYTIIING--------------------- 179
             ++G++++A    R M+    S+  V D ++  +I +G                     
Sbjct: 315 LCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSS 374

Query: 180 ---------YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
                     C+ G V  AL + + M+++G   D+ T++ ++N LC+A  + EA +    
Sbjct: 375 GTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQG 434

Query: 231 MLER--GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCK 287
           M  +        +++ +L++  CK   +++A  +F  M +++S  PD+V+Y+ LIDGFCK
Sbjct: 435 MDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCK 494

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
           + E+ +A KL+  MI     PN  +Y   +NG    G + +A  ++ EMV  G  P +++
Sbjct: 495 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVIT 554

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            +T+I G+  +    +A E    M+S G  P++++YN L++G  +E   D+A  L  KM 
Sbjct: 555 YSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 614

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G  PD +TY  +L GFC  G++  +  +   M+ KG +PD   Y  L+ G        
Sbjct: 615 ERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 674

Query: 468 EAFRFHDEMLQRGFVPD 484
           EA +    M+ R   PD
Sbjct: 675 EAKQLFQVMVSRQCKPD 691



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 246/544 (45%), Gaps = 73/544 (13%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           A  F   ++ +    D  TYN L++   R   L++A Q+   M  +G+ P  FTY  L+ 
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYN----------------------------- 104
             C +   D A     EM+  G  P +  Y                              
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAV 232

Query: 105 ------TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
                  LLV    ++   EA ++F  M + G  PD   +S ++    +   LD A   F
Sbjct: 233 EMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLF 292

Query: 159 REMKSAGLVP-DNVLYTIIINGYCRNGFVLEALK----MRDEMLEKGCVMDVV------- 206
            EM      P +NV +T  ++G C++G + +A +    M++ +     V D++       
Sbjct: 293 LEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIES 352

Query: 207 -----------------------TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
                                  T ++++  LC+A  +  A  L   M++RG  PD  T 
Sbjct: 353 GRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATH 412

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQK--SIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           + LI+  CK   + +A      M +K  S      +YN+L++  CK  ++ +A  +++ M
Sbjct: 413 SMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTM 472

Query: 302 IS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +S R   P+ +SY ILI+G+C +  +  A +L+ +M+     P + + N  + G  R G 
Sbjct: 473 VSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGR 532

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A     +MV+ G  PD I+Y+TLI+GF      D+A  L   M ++G  P+ +TYN 
Sbjct: 533 IADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNC 592

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C++ +  ++  +  +M+E+G +PDR TYTTL+ G  +   +++A    DEM+ +G
Sbjct: 593 LLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKG 652

Query: 481 FVPD 484
             PD
Sbjct: 653 HDPD 656



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 197/358 (55%), Gaps = 4/358 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK--GVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-S 57
           ++N LCK  KI  A+ FL  M++K         +YN+L+N+ C+   + +AF + ++M S
Sbjct: 415 LINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVS 474

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            +   P V +Y+ LI+G CK     RA+++  +M+ +   P+  TYN  L    RK  ++
Sbjct: 475 ERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIA 534

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A+ ++ EM   G +PD++++STLI  FS   + D+A   F  M S G  P+ V Y  ++
Sbjct: 535 DAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLL 594

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G C+     EA ++  +M+E+GC  D VTY T+L G C    + +A ++F+EM+ +G  
Sbjct: 595 HGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD 654

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD   +  L+ G  + G   +A  LF +M  +  KPD V++N +IDG  K   ++ A ++
Sbjct: 655 PDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEV 714

Query: 298 WADM-ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
           +  M      SP+ ++Y  LI G C    ++EA +++ E+    + P   + N +++ 
Sbjct: 715 FERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 191/442 (43%), Gaps = 77/442 (17%)

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA   F  +  R    D+ +++ L+    R+  L +A   F +M + G+VP+   Y +++
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI-------------------------- 211
              C      EA++   EM++KG       Y  +                          
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 212 ----------LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
                     +N + + K + EA  LF  M++ G  PD   ++ ++  HCK  N+++A  
Sbjct: 232 VEMMLKKALLVNFVIQDKAI-EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290

Query: 262 LFDIMTQKSIKP-DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           LF  M  +S  P + V +   + G CK G++E+A +    M    +S +   Y +LI   
Sbjct: 291 LFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLL 349

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G + +A     E+ G+ I+P+  +C+++I+  C++G    A   L  M+  G  PD 
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409

Query: 381 IS-------------------------------------YNTLINGFVREENMDKAFALV 403
            +                                     YN+L+N   + + + +AFA+ 
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIF 469

Query: 404 SKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           S M   +  VPDV++Y++++ GFC+   +  +E +  +MI+    P+ +TY   +NG + 
Sbjct: 470 STMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMR 529

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
           +  + +A   ++EM+  G  PD
Sbjct: 530 KGRIADAQGVYEEMVAAGCSPD 551



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 104/216 (48%), Gaps = 1/216 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++      K D A      M  +G  P+ VTYN L++  C+E   +EA +L   M  +G
Sbjct: 558 LIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 617

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY +L+ G C  G+ ++A EV DEM+  G  PD   YN LL    R     EA+
Sbjct: 618 CDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAK 677

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
           ++F  M  R   PD VS + +I   S+  +LD A+  F  M +  G  PD V Y  +I G
Sbjct: 678 QLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 737

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            C    + EA+K+  E+       D   +N +L  +
Sbjct: 738 LCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 72/307 (23%)

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           H +DG   +AL  F  +  ++ K D+ TYN L+D   +  ++++A +++  M+++ + PN
Sbjct: 106 HLRDGG--EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPN 163

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI---IKGYCRSGDASK--- 363
             +Y +L+   C   +  EA R + EMV KG KP+      +   +K   + G+ S+   
Sbjct: 164 GFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFG 223

Query: 364 -----------------------------ADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
                                        A +    MV  G  PD+  Y+ ++    + E
Sbjct: 224 RDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLE 283

Query: 395 NMDKAFALVSKMENQGLVP-DVITYNVILTGFCRQGRMHDS------------------E 435
           N+D+AF L  +M  +   P + + +   L+G C+ G++  +                  +
Sbjct: 284 NLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYD 343

Query: 436 LILWRMIEKG----------------LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++  +IE G                + P   T  ++I        +  A    + M++R
Sbjct: 344 MLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKR 403

Query: 480 GFVPDDA 486
           G+ PD A
Sbjct: 404 GYCPDMA 410


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 249/491 (50%), Gaps = 22/491 (4%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++   K  L  M  +G YP+   +N+LI+AYC+      A++L   M   G +PG   YN
Sbjct: 329 QLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYN 388

Query: 70  SLINGLCKKGR------CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
             I  +C           D  ++   EML +G+  +    +      C      +A +I 
Sbjct: 389 IFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKII 448

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
           CEM  +G  PD  ++S +IG      ++++A   F EMK  G+VP    YTI+I+ +C+ 
Sbjct: 449 CEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKA 508

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +A K  DEML KGC  +VVTY  +++   +AK +  AD+LF  ML  G  P+  T+
Sbjct: 509 GLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTY 568

Query: 244 TTLIHGHCKDGNMNKALNLF-----DIMTQKSIK-----------PDIVTYNTLIDGFCK 287
           T LI GHCK G + KA  ++     DI +    K           P+++TY  L+DG CK
Sbjct: 569 TALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCK 628

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
              +++A++L   M++    PN I Y  +I+G+C +G + +A  ++ +M  +G  P L +
Sbjct: 629 ANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYT 688

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            ++ I    +        + LSKM+     P+ + Y  +++G  +    D+A+ L+ KME
Sbjct: 689 YSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKME 748

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G  P+V+TY  ++ GF + G++     +   M  KG  P+  TY  LIN   S   L 
Sbjct: 749 EKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLD 808

Query: 468 EAFRFHDEMLQ 478
           EA++  DEM Q
Sbjct: 809 EAYKLLDEMKQ 819



 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 252/538 (46%), Gaps = 59/538 (10%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LCK  K   A   + E E     PDTV YN +++  C     EEA  +++ M      P
Sbjct: 255 SLCKGGKCREAFDLIDEAED--FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIP 312

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V TY  L++G  +KG+  R K +L  M+  G  P+   +N+L+   C+  + S A ++F
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLF 372

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRN----------------------------------- 148
            +M + G  P  + ++  IG    N                                   
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFA 432

Query: 149 ------GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
                 G+ D+A     EM   G VPD+  Y+ +I   C    V +A  + +EM   G V
Sbjct: 433 RCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIV 492

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
             V TY  +++  C+A ++ +A   F+EML +G  P+  T+T LIH + K   M  A  L
Sbjct: 493 PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADEL 552

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS--------------- 307
           F++M  +  KP++VTY  LIDG CK G++EKA +++A M     S               
Sbjct: 553 FEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCE 612

Query: 308 -PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            PN I+YG L++G C    V EA  L   M+  G +P  +  + +I G+C+ G    A E
Sbjct: 613 GPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQE 672

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
             +KM   G  P+  +Y++ I+   ++  +D    ++SKM      P+V+ Y  ++ G C
Sbjct: 673 VFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLC 732

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G+  ++  ++ +M EKG NP+  TYT +I+G      +++      +M  +G  P+
Sbjct: 733 KIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPN 790



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 236/516 (45%), Gaps = 86/516 (16%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K D A   +CEM  KG  PD  TY+ +I   C    +E+AF L   M   G+ P 
Sbjct: 435 LCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPS 494

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  LI+  CK G   +A++  DEML  G +P+  TY  L+    + + M  A+E+F 
Sbjct: 495 VYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFE 554

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK----SAGL------------VP 168
            M   G  P++V+++ LI    + GQ+++A   +  M+    S+ +             P
Sbjct: 555 MMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGP 614

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + + Y  +++G C+   V EA ++ D ML  GC  + + Y+ +++G C+   L +A ++F
Sbjct: 615 NVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVF 674

Query: 229 NEMLERGVFPDFYTF-----------------------------------TTLIHGHCKD 253
            +M ERG  P+ YT+                                   T ++ G CK 
Sbjct: 675 TKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKI 734

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G  ++A  L   M +K   P++VTY  +IDGF K G++E+  +L+ DM S+  +PN+I+Y
Sbjct: 735 GKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITY 794

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG------------------- 354
            +LIN  CS G + EA++L  EM        ++S   II+G                   
Sbjct: 795 RVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENE 854

Query: 355 --------------YCRSGDASKADEFLSKMVSEGVDPDS--ISYNTLINGFVREENMDK 398
                         Y ++G    A + L ++ S      S    Y +LI        +DK
Sbjct: 855 SVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDK 914

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           A  L + M ++ +VP++     ++ G  +  +  ++
Sbjct: 915 ALELYASMISKNVVPELSILVHLIKGLIKVDKWQEA 950



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 236/473 (49%), Gaps = 18/473 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM   GV  + V  +      C  G  ++AF+++  M GKG  P   TY+ +I  LC   
Sbjct: 415 EMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDAS 474

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + ++A  + +EM + G+ P   TY  L+   C+   + +A + F EM  +G  P++V+++
Sbjct: 475 KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYT 534

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM--- 196
            LI  + +  Q+  A   F  M   G  P+ V YT +I+G+C+ G + +A ++   M   
Sbjct: 535 ALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGD 594

Query: 197 -----LEKGCVMD--------VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
                ++K   +D        V+TY  +++GLC+A  + EA +L + ML  G  P+   +
Sbjct: 595 IESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVY 654

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             +I G CK G +  A  +F  M+++   P++ TY++ ID   K   ++   K+ + M+ 
Sbjct: 655 DAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLE 714

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
              +PN + Y  +++G C +G   EA++L  +M  KG  P +V+   +I G+ +SG   +
Sbjct: 715 NSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQ 774

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
             E    M S+G  P+ I+Y  LIN       +D+A+ L+ +M+       ++++  I+ 
Sbjct: 775 CLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIE 834

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           GF ++     S  +L  + E    P  S Y  LI+ ++    L+ A    +E+
Sbjct: 835 GFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEI 885



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/541 (25%), Positives = 243/541 (44%), Gaps = 59/541 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C++   + A   L  ++  G  P   TYN LI  + R   L+ A+ +   M    
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYA 241

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                +T +     LCK G+C  A +++DE       PDT  YN ++   C      EA 
Sbjct: 242 FVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAM 299

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I   M      P++V++  L+    R GQL R       M + G  P+  ++  +I+ Y
Sbjct: 300 DILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAY 359

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYN------------------------------- 209
           C++     A K+  +M++ GC    + YN                               
Sbjct: 360 CKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDL 419

Query: 210 -TILNG---------LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             +LN          LC A    +A  +  EM+ +G  PD  T++ +I   C    + KA
Sbjct: 420 GVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKA 479

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            +LF+ M +  I P + TY  LID FCK G +++A K + +M+ +  +PN ++Y  LI+ 
Sbjct: 480 FSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHA 539

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV----SEG 375
           Y     +  A  L+  M+ +G KP +V+   +I G+C++G   KA +  ++M     S  
Sbjct: 540 YLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSD 599

Query: 376 VD------------PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           +D            P+ I+Y  L++G  +   + +A  L+  M   G  P+ I Y+ ++ 
Sbjct: 600 MDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVID 659

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GFC+ G++ D++ +  +M E+G +P+  TY++ I+     N L    +   +ML+    P
Sbjct: 660 GFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTP 719

Query: 484 D 484
           +
Sbjct: 720 N 720



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 210/423 (49%), Gaps = 26/423 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-- 58
           +++A  K  ++  A      M  +G  P+ VTY  LI+ +C+ G +E+A Q+   M G  
Sbjct: 536 LIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDI 595

Query: 59  ------KGLK--------PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                 K  K        P V TY +L++GLCK  R   A E+LD ML  G  P+   Y+
Sbjct: 596 ESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYD 655

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            ++   C+   + +A+E+F +MS RG +P++ ++S+ I    ++ +LD  L    +M   
Sbjct: 656 AVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLEN 715

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V+YT +++G C+ G   EA K+  +M EKGC  +VVTY  +++G  ++  + + 
Sbjct: 716 SCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQC 775

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            +LF +M  +G  P+F T+  LI+  C +G +++A  L D M Q      I+++  +I+G
Sbjct: 776 LELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEG 835

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           F +  E   +  L  ++   +  P    Y ILI+ Y   G +  A  L  E+      P+
Sbjct: 836 FSQ--EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISS---SPS 890

Query: 345 LVSCN-----TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
               N     ++I+    +    KA E  + M+S+ V P+      LI G ++ +   +A
Sbjct: 891 HAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEA 950

Query: 400 FAL 402
             L
Sbjct: 951 LQL 953



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 145/354 (40%), Gaps = 43/354 (12%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           L   ++   CRNG+   AL+    + + G      TYN ++    RA  L  A  +  EM
Sbjct: 178 LLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREM 237

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           L      D YT +   +  CK G   +A +L D    +   PD V YN ++ G C+    
Sbjct: 238 LSYAFVMDRYTLSCFAYSLCKGGKCREAFDLID--EAEDFVPDTVFYNRMVSGLCEASLF 295

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           E+A  +   M S    PN ++Y IL++G    G +    R+   M+ +G  P     N++
Sbjct: 296 EEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSL 355

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE----------------- 394
           I  YC+S D S A +   KM+  G  P  + YN  I      E                 
Sbjct: 356 IHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSE 415

Query: 395 ------------------------NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
                                     D+AF ++ +M  +G VPD  TY+ ++   C   +
Sbjct: 416 MLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASK 475

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  +  +   M   G+ P   TYT LI+       +++A ++ DEML +G  P+
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPN 529



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 48/277 (17%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LCK  K D A   + +ME+KG  P+ VTY  +I+ + + G +E+  +L   M  KG
Sbjct: 727 MVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKG 786

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE------ 114
             P   TY  LIN  C  G  D A ++LDEM Q    P     +  ++E   +E      
Sbjct: 787 CAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQT-YWPKHILSHRKIIEGFSQEFITSIG 845

Query: 115 ---NMSEAEEI------------FCEMSRRGVAPDIVS---------------FSTLIGI 144
               +SE E +            + +  R  VA D++                +++LI  
Sbjct: 846 LLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIEN 905

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
            S   ++D+AL  +  M S  +VP+  +   +I G  +     EAL++ D +    C MD
Sbjct: 906 LSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSI----CQMD 961

Query: 205 VVTYNTILNG-------LCRAKMLTEADDLFNEMLER 234
           +        G       L  A M+     +  E+LER
Sbjct: 962 IHWLQEKATGRTEEMVKLVIAAMVEAETGVSEEILER 998


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 255/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D AK     M  KGV P+  TY  LI+ Y   G  +E  Q++  MS  G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG 267

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P    Y  L++ LCK GRC  A+ + D +++ G+ P    Y  LL     +  +SE  
Sbjct: 268 LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMH 327

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M R GV+PD   F+ +   +++   +D A+  F +M+   L P  V Y  +I+  
Sbjct: 328 SFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDAL 387

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A+   ++M+ +G   D+  +++++ GLC      +A+ LF E+L++G+  + 
Sbjct: 388 CKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNA 447

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F  L+   C++G + +A  L D+M +  ++PD+++YNTL+DG C  G +++A KL   
Sbjct: 448 AFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDV 507

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+  +Y  L++GYC    + +A+ L+ EM+ KG+ P +V+ NTI+ G  + G 
Sbjct: 508 MVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGR 567

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E    M++     D  +Y  ++NG  R   +D+AF +   + ++ L  D+ T N+
Sbjct: 568 FCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINI 627

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  D+  +   +   GL PD  TY  +    + + +L+E       M + G
Sbjct: 628 MIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENG 687

Query: 481 FVPD 484
             P+
Sbjct: 688 TAPN 691



 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 153/488 (31%), Positives = 252/488 (51%), Gaps = 4/488 (0%)

Query: 1   MVNALCKDHKIDSAK-MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++  LC   ++D A  + L  M + G   + ++YN L+   C E   EEA +LM+ M+  
Sbjct: 134 LLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADD 193

Query: 60  G---LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
           G     P V TY ++I+GLCK    DRAK V   M+  G+ P+  TY  L+         
Sbjct: 194 GDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKW 253

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            E  ++  EMS  G+ PD V ++ L+    +NG+   A   F  +   G+ P   +Y I+
Sbjct: 254 KEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGIL 313

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++GY   G + E     D M+  G   D   +N + N   +  M+ EA  +F++M ++ +
Sbjct: 314 LHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWL 373

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P    +  LI   CK G ++ A+  F+ M  + + PDI  +++L+ G C V + EKA K
Sbjct: 374 SPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEK 433

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+ +++ + I  N   + IL+   C  G V EA RL   M+   ++P ++S NT++ G+C
Sbjct: 434 LFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHC 493

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
            +G   +A + L  MVS G+ PD  +YNTL++G+ +   +D A++L  +M  +GL P V+
Sbjct: 494 LTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVV 553

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN IL G  + GR  +++ +   MI      D  TYT ++NG    N + EAF+    +
Sbjct: 554 TYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSL 613

Query: 477 LQRGFVPD 484
             +    D
Sbjct: 614 CSKDLQLD 621



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 211/417 (50%), Gaps = 11/417 (2%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE---EIFCEMSRR---GVAPDI 135
           D A ++ DEML         T+N LL    R    S +E    +F  M R     VAP  
Sbjct: 33  DDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSS 92

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN-VLYTIIINGYCRNGFVLEALK-MR 193
            +++ LIG F R G+L      F  +   G   +N V++  ++ G C    V EA   + 
Sbjct: 93  CTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILL 152

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG---VFPDFYTFTTLIHGH 250
             M E GC ++V++YN +L GLC  K   EA +L + M + G     P+  T+TT+I G 
Sbjct: 153 RRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGL 212

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK   +++A  +F  M  K ++P+  TY  LI G+   G+ ++  ++  +M +  + P+ 
Sbjct: 213 CKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDC 272

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           + Y +L++  C  G  TEA  ++  ++ KGIKP +     ++ GY   G  S+   FL  
Sbjct: 273 VIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDL 332

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV  GV PD   +N + N + ++  +D+A  +  KM  Q L P V+ Y  ++   C+ GR
Sbjct: 333 MVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGR 392

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           + D+ L   +MI +G+ PD   +++L+ G  + +  ++A +   E+L +G   + AF
Sbjct: 393 VDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAF 449



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 231/487 (47%), Gaps = 48/487 (9%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-------QMGLSP 98
           L++A +L + M        V T+N L+  +  + RC  A E++  +         + ++P
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLT-VVSRARCSSASELVVSLFNRMIRECSVKVAP 90

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA-PDIVSFSTLIGIFSRNGQLDRAL-M 156
            + TY  L+   CR   +      F  + + G +  + V F  L+       ++D A  +
Sbjct: 91  SSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDI 150

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG---CVMDVVTYNTILN 213
             R M   G   + + Y I++ G C      EAL++   M + G      +VVTY T+++
Sbjct: 151 LLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVID 210

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH----------------------- 250
           GLC+A+M+  A  +F  M+++GV P+ +T+T LIHG+                       
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQP 270

Query: 251 ------------CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
                       CK+G   +A N+FD + +K IKP +  Y  L+ G+   G + + +   
Sbjct: 271 DCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFL 330

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+   +SP++  + I+ N Y     + EA  ++ +M  + + P +V+   +I   C+ 
Sbjct: 331 DLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKL 390

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A    ++M++EGV PD   +++L+ G    +  +KA  L  ++ +QG+  +   +
Sbjct: 391 GRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFF 450

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N+++   CR+GR+ +++ ++  M+   + PD  +Y TL++GH     + EA +  D M+ 
Sbjct: 451 NILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS 510

Query: 479 RGFVPDD 485
            G  PD+
Sbjct: 511 IGLKPDE 517


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 147/478 (30%), Positives = 250/478 (52%), Gaps = 1/478 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K H +D   +    M +K   P    ++ L+ A  R G    A  L + +  KG+ P + 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T   LIN  C +     A  +L  +L+MG  P+  T+NTL+   C    +S+A     ++
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
             +G   D  S+ +LI    +NGQ   AL   ++M+   + P+ + Y+ +I+G C++  +
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +AL++   +  +G ++DVV YN++++G C      EA  L   M+   + PD YTF  L
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           +   CK+G + +A  +F +M ++  KPDIVTYN L++GFC    + +A +L+  M+ R +
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ ++Y +LINGYC +  V EA  L+ E+  K + P L + N++I G C+ G  S   E
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQE 391

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            + +M   G  PD ++YN  ++ F + +  +KA +L  ++  QG+ PD   Y+VI+  FC
Sbjct: 392 LVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFC 450

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  ++  +E  L  ++  G  P+  TYT +IN      +  EA     +M      PD
Sbjct: 451 KGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPD 508



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 248/451 (54%), Gaps = 1/451 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C    +  A   L  + + G  P+ VT+NTLIN +C  G + +A      +  KG
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                F+Y SLINGLCK G+   A ++L +M +  + P+  TY+T++   C+   +++A 
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  ++ RG+  D+V++++LI      GQ   A      M    + PD+  + I+++  
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA  +   M+++G   D+VTYN ++ G C +  ++EA +LFN M++RG+ PD 
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LI+G+CK   +++A+ LF  +  K++ P++ TYN+LIDG CK+G M    +L  +
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDE 395

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R  SP+ ++Y I ++ +C      +A  L+ ++V +GI P     + I++ +C+   
Sbjct: 396 MCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEK 454

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A+E L  ++  G  P+  +Y  +IN   ++ + D+A  L+SKM++    PD +T+  
Sbjct: 455 LKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFET 514

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           I+     +     +E +   MIE+GL  D +
Sbjct: 515 IIGALQERNETDKAEKLRLEMIERGLVNDEA 545



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 252/486 (51%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A+ +     +A     ++  KG+ P   T   LIN YC +  L  AF L+ ++   G
Sbjct: 61  LLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMG 120

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T+N+LING C  G   +A     +++  G   D  +Y +L+   C+     +A 
Sbjct: 121 FQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDAL 180

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M    V P+++++ST+I    ++  +  AL  F  + S G++ D V Y  +I+G 
Sbjct: 181 QLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGC 240

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EA ++   M+      D  T+N +++ LC+   + EA  +F  M++RG  PD 
Sbjct: 241 CSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDI 300

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L+ G C   N+++A  LF+ M ++ ++PD++ YN LI+G+CK+  +++A  L+ +
Sbjct: 301 VTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKE 360

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + PN  +Y  LI+G C +G ++    L  EM  +G  P +V+ N  +  +C+S  
Sbjct: 361 IRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKP 420

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA     ++V +G+ PD   Y+ ++  F + E +  A   +  +   G  P+V TY +
Sbjct: 421 YEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTI 479

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C+     ++  +L +M +    PD  T+ T+I     +N   +A +   EM++RG
Sbjct: 480 MINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERG 539

Query: 481 FVPDDA 486
            V D+A
Sbjct: 540 LVNDEA 545



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 131/258 (50%), Gaps = 3/258 (1%)

Query: 231 MLERGVFPDFYTFTTLIHGHC---KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           +L R +   F++      GH    K   ++  L  F+ M +K   P I  ++ L+    +
Sbjct: 8   VLPRSIHILFFSQHVRFFGHLHPPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVR 67

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
           +G    A  L++ + S+ I+P+  +  ILIN YC   H++ AF L   ++  G +P +V+
Sbjct: 68  MGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVT 127

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            NT+I G+C +G  SKA  F   ++++G   D  SY +LING  +      A  L+ KME
Sbjct: 128 FNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKME 187

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
              + P++ITY+ ++ G C+   + D+  +   +  +G+  D   Y +LI+G  S    +
Sbjct: 188 EDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWR 247

Query: 468 EAFRFHDEMLQRGFVPDD 485
           EA R    M++    PDD
Sbjct: 248 EATRLLTMMVRGNINPDD 265


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 275/553 (49%), Gaps = 70/553 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LC+D +   A     EM++ GV P+ VTY T I++  +   + E+  L+  M  +G
Sbjct: 300 LVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRG 359

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   +  Y ++++ L K+G+ + AK+VL   L   ++P+  TY  L+   CR  N+  AE
Sbjct: 360 VAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAE 419

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M  + V+P++V+FS+++    + G + +A  Y R+MK +G+ P+ V Y  +I+G+
Sbjct: 420 QMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGF 479

Query: 181 --C---------------------------------RNGFVLEALKMRDEMLEKGCVMDV 205
             C                                 +NG + EA  +  +M E+G ++D 
Sbjct: 480 FKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDH 539

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V Y T+++GL +   +  A  +  E++ER + PD   +   I+  C+ G  ++A +    
Sbjct: 540 VNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKE 599

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    ++PD  TYNT+I   C+ G   KA KL  +M    I PN I+Y  L+ G    G 
Sbjct: 600 MRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGV 659

Query: 326 VTEAFRLWYEMVGKGIKPT-------LVSC----------------------------NT 350
           V +A  L  EM   G  PT       L +C                            NT
Sbjct: 660 VEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNT 719

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++   C  G   KA   L +M+  G+ PD+I++N LI G  +  ++D AFA  ++M +QG
Sbjct: 720 LVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQG 779

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           L P++ T+N +L G    GR+ +++ ++  M + GL P+  TY  L+ G+  ++N  EA 
Sbjct: 780 LSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEAL 839

Query: 471 RFHDEMLQRGFVP 483
           R + EM+ +GF+P
Sbjct: 840 RLYCEMVSKGFIP 852



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 247/470 (52%), Gaps = 3/470 (0%)

Query: 18  LCEMEQKGVYPD---TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLING 74
           L EM  +G   D    V +N LI+ YC+   +  A  ++  M+ +GL   V  YN+L+ G
Sbjct: 174 LAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAG 233

Query: 75  LCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPD 134
               G  D A EV + M   G+ P   T+ TL+ E C+ + + EA  ++  M R GV PD
Sbjct: 234 FFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPD 293

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           +V+ S L+    R+G+   A   FREM   G+ P++V Y   I+   +   V E+L +  
Sbjct: 294 VVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLG 353

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM+ +G  MD+V Y T+++ L +   + EA D+    L   + P+  T+T L+  HC+ G
Sbjct: 354 EMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAG 413

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
           N++ A  +   M +KS+ P++VT++++++G  K G + KA      M    I+PN ++YG
Sbjct: 414 NIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYG 473

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            LI+G+        A  ++ +M+ +G++      ++++ G  ++G+  +A+     M   
Sbjct: 474 TLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGER 533

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+  D ++Y TL++G  +  NM  A  +  ++  + L PD + YNV +   CR G+  ++
Sbjct: 534 GLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEA 593

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  L  M   GL PD++TY T+I+    + N  +A +  +EM      P+
Sbjct: 594 KSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643



 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 250/484 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K   I  A  ++ +M+  G+ P+ VTY TLI+ + +    E A  +   M  +G
Sbjct: 440 ILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEG 499

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++   F  +SL+NGL K G  + A+ +  +M + GL  D   Y TL+    +  NM  A 
Sbjct: 500 VEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAAL 559

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E+  R ++PD V ++  I    R G+   A  + +EM++ GL PD   Y  +I+  
Sbjct: 560 KVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQ 619

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G   +ALK+ +EM       +++TY T++ GL  A ++ +A  L NEM   G  P  
Sbjct: 620 CREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTP 679

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++       +    L + ++M    +  DI  YNTL+   C  G   KA  +  +
Sbjct: 680 LTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDE 739

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R I+P+ I++  LI G+C   H+  AF  + +M+ +G+ P + + NT++ G   +G 
Sbjct: 740 MLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGR 799

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +AD  + +M   G++P++++Y+ L+ G+ ++ N  +A  L  +M ++G +P   TYN 
Sbjct: 800 IGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNS 859

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++ F + G M+ ++ +   M  +G+    STY  L+NG     N  E      +M + G
Sbjct: 860 LISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELG 919

Query: 481 FVPD 484
           F P 
Sbjct: 920 FKPS 923



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/440 (31%), Positives = 233/440 (52%), Gaps = 4/440 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L K+  I+ A+    +M ++G+  D V Y TL++   + G +  A ++   +  + 
Sbjct: 510 LVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN 569

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    YN  IN LC+ G+   AK  L EM   GL PD ATYNT++   CR+ N S+A 
Sbjct: 570 LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKAL 629

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING- 179
           ++  EM    + P++++++TL+      G +++A     EM SAG  P  + Y  ++   
Sbjct: 630 KLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQAC 689

Query: 180 -YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
              R+ +V+  L++ + M+  G   D+  YNT+++ LC   M  +A  + +EML RG+ P
Sbjct: 690 SGSRSPYVI--LEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAP 747

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  TF  LI GHCK  +++ A   +  M  + + P+I T+NTL+ G    G + +A+ + 
Sbjct: 748 DTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVI 807

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M    + PN ++Y IL+ GY    +  EA RL+ EMV KG  P   + N++I  + ++
Sbjct: 808 CEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKA 867

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  ++A E  S+M   GV   S +Y+ L+NG+ +  N  +   L+  M+  G  P   T 
Sbjct: 868 GMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTI 927

Query: 419 NVILTGFCRQGRMHDSELIL 438
           + +   F + G   ++  +L
Sbjct: 928 SSMSRAFSKPGMTWEARRLL 947



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 240/475 (50%), Gaps = 2/475 (0%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGKGLKP-GVFTYNSL 71
           A   L EM ++GV  D VT +T +    R G + EA  L   +  G+G+   GV  +N+L
Sbjct: 136 APPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNAL 195

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I+G CK      A  V++ M   GLS D   YNTL+       +   A E+   M   GV
Sbjct: 196 IDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGV 255

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P +V+ +TLIG + +  +++ A   +  M  +G++PD V  + +++G CR+G   EA  
Sbjct: 256 EPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYA 315

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  EM + G   + VTY T ++ L + + + E+  L  EM+ RGV  D   +TT++    
Sbjct: 316 LFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLG 375

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K+G + +A ++       +I P+ VTY  L+D  C+ G ++ A ++   M  + +SPN +
Sbjct: 376 KEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVV 435

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           ++  ++NG    G + +A     +M   GI P +V+  T+I G+ +      A +    M
Sbjct: 436 TFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDM 495

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           + EGV+ ++   ++L+NG  +  N+++A AL   M  +GL+ D + Y  ++ G  + G M
Sbjct: 496 LHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNM 555

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +  +   ++E+ L+PD   Y   IN         EA  F  EM   G  PD A
Sbjct: 556 PAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQA 610



 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 251/542 (46%), Gaps = 70/542 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+A C+   ID A+  L +ME+K V P+ VT+++++N   + G + +A   M  M   G
Sbjct: 405 LVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSG 464

Query: 61  LKPGVFTY-----------------------------------NSLINGLCKKGRCDRAK 85
           + P V TY                                   +SL+NGL K G  + A+
Sbjct: 465 IAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAE 524

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  +M + GL  D   Y TL+    +  NM  A ++  E+  R ++PD V ++  I   
Sbjct: 525 ALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCL 584

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G+   A  + +EM++ GL PD   Y  +I+  CR G   +ALK+ +EM       ++
Sbjct: 585 CRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNL 644

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFP--------------------------- 238
           +TY T++ GL  A ++ +A  L NEM   G  P                           
Sbjct: 645 ITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHEL 704

Query: 239 --------DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
                   D   + TL+H  C  G   KA  + D M  + I PD +T+N LI G CK   
Sbjct: 705 MMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSH 764

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           ++ A   +A M+ + +SPN  ++  L+ G  S G + EA  +  EM   G++P  ++ + 
Sbjct: 765 LDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDI 824

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++ GY +  +  +A     +MVS+G  P + +YN+LI+ F +   M++A  L S+M+ +G
Sbjct: 825 LVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRG 884

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           ++    TY+++L G+ +     +  ++L  M E G  P + T +++           EA 
Sbjct: 885 VLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEAR 944

Query: 471 RF 472
           R 
Sbjct: 945 RL 946



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 195/370 (52%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N LC+  K   AK FL EM   G+ PD  TYNT+I+A CREG   +A +L+N M    +
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP + TY +L+ GL + G  ++AK +L+EM   G +P   TY  +L       +     E
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILE 700

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +   M   G+  DI  ++TL+ +   +G   +A +   EM   G+ PD + +  +I G+C
Sbjct: 701 VHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHC 760

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++  +  A     +ML +G   ++ T+NT+L GL  A  + EAD +  EM + G+ P+  
Sbjct: 761 KSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNL 820

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  L+ G+ K  N  +AL L+  M  K   P   TYN+LI  F K G M +A +L+++M
Sbjct: 821 TYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEM 880

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R +     +Y IL+NG+  + + TE   L  +M   G KP+  + +++ + + + G  
Sbjct: 881 KRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMT 940

Query: 362 SKADEFLSKM 371
            +A   L  +
Sbjct: 941 WEARRLLKTL 950



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 227/486 (46%), Gaps = 49/486 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL     + +A  F      + V  D +T N++I +YC    L  A  L+ S SG  
Sbjct: 57  LIPALASSGLVAAASRF------RPVPGDPLTLNSIILSYCSLHALRPALSLLRSSSGP- 109

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                                           Q  ++ DT +YN  L     + +   A 
Sbjct: 110 --------------------------------QPQVAADTVSYNIFLAGLSEQGHGRLAP 137

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA------LMYFREMKSAGLVPDNVLYT 174
            +  EM +RGV  D V+ ST +   SR G +  A      L+  R +   G+V  N L  
Sbjct: 138 PVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNAL-- 195

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
             I+GYC+   +  AL + + M  +G  +DVV YNT++ G   +     A ++   M   
Sbjct: 196 --IDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKAD 253

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           GV P   T TTLI  +CK   + +A  L++ M +  + PD+VT + L+DG C+ G   +A
Sbjct: 254 GVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEA 313

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L+ +M    ++PN+++Y   I+    +  V E+  L  EMV +G+   LV   T++  
Sbjct: 314 YALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDR 373

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             + G   +A + L   +S+ + P+ ++Y  L++   R  N+D A  ++ +ME + + P+
Sbjct: 374 LGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPN 433

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V+T++ IL G  ++G +  +   + +M + G+ P+  TY TLI+G       + A   + 
Sbjct: 434 VVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYR 493

Query: 475 EMLQRG 480
           +ML  G
Sbjct: 494 DMLHEG 499



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 123/235 (52%), Gaps = 4/235 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LC       A + L EM  +G+ PDT+T+N LI  +C+   L+ AF     M  +G
Sbjct: 720 LVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQG 779

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + T+N+L+ GL   GR   A  V+ EM +MGL P+  TY+ L+    +K N  EA 
Sbjct: 780 LSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEAL 839

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++CEM  +G  P   ++++LI  F++ G +++A   F EMK  G++  +  Y I++NG+
Sbjct: 840 RLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW 899

Query: 181 C--RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
              RNG   E   +  +M E G      T +++     +  M  EA  L   + +
Sbjct: 900 SKLRNG--TEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 44/94 (46%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K   ++ AK    EM+++GV   + TY+ L+N + +     E   L+  M   G
Sbjct: 860 LISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELG 919

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            KP   T +S+     K G    A+ +L  + ++
Sbjct: 920 FKPSKGTISSMSRAFSKPGMTWEARRLLKTLFKV 953


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 154/519 (29%), Positives = 260/519 (50%), Gaps = 73/519 (14%)

Query: 38  NAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL 96
           +AY +    ++A  +   M    G +PG+ +YNSL+N L +  + D A+        MGL
Sbjct: 61  HAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGL 120

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           SP+  TYN L+  SCRK+   +A+E+   M  +G +PD+ S+ TLI   ++NG +  AL 
Sbjct: 121 SPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALK 180

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGL 215
            F EM   G+ PD   Y I+I+G+ + G +L A ++ + +L+   V  ++ +YN ++NGL
Sbjct: 181 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL 240

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
           C+     E+ ++++ M +     D YT++TLIHG C  GN++ A  ++  M +  + PD+
Sbjct: 241 CKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDV 300

Query: 276 VTYNTLIDGFCKVGEMEK----------------------------------ANKLWADM 301
           V YNT+++G+ + G +E+                                  A  +W  +
Sbjct: 301 VVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELL 360

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYE-------------------------- 335
             +    + ++YG+L++G C  G++ +A  +  E                          
Sbjct: 361 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 420

Query: 336 ---------MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
                    M   G KP    CN +I G+ R+     A  F   MVS+G  P  ++YNTL
Sbjct: 421 DEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 480

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW-RMIEKG 445
           ING  + E   +A+ALV +M  +G  P++ITY++++ G C QG+  D  L LW + +EKG
Sbjct: 481 INGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLC-QGKKLDMALNLWCQALEKG 539

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             PD   +  +I+G  S   +++A + + EM QR  VP+
Sbjct: 540 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPN 578



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 263/520 (50%), Gaps = 37/520 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NAL + +K D A+ F    E  G+ P+  TYN LI   CR+   ++A +L+N M G+G
Sbjct: 95  LLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQG 154

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL------------- 107
             P VF+Y +LIN L K G    A ++ DEM + G++PD A YN L+             
Sbjct: 155 FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNAS 214

Query: 108 ---------------VES--------CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
                          + S        C+     E+ EI+  M +     D+ ++STLI  
Sbjct: 215 EIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 274

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
              +G LD A   ++EM   G+ PD V+Y  ++NGY R G + E L++   M ++GC   
Sbjct: 275 LCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RT 333

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VV+YN ++ GL     + EA  ++  + E+    D  T+  L+HG CK+G +NKAL++ +
Sbjct: 334 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 393

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
                    D   Y+++I+G C+ G +++   +   M      PN      +ING+    
Sbjct: 394 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRAS 453

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A R +  MV KG  PT+V+ NT+I G  ++   S+A   + +M+ +G  P+ I+Y+
Sbjct: 454 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYS 513

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L+NG  + + +D A  L  +   +G  PDV  +N+I+ G C  G++ D+  +   M ++
Sbjct: 514 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 573

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              P+  T+ TL+ G     + + A +  D +LQ G  PD
Sbjct: 574 NCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPD 613



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 254/497 (51%), Gaps = 35/497 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++N+L K+  +  A     EM ++GV PD   YN LI+ + ++G +  A ++   +  G 
Sbjct: 165 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 224

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P + +YN +INGLCK G+ D + E+   M +     D  TY+TL+   C   N+  A
Sbjct: 225 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 284

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-------------- 165
             ++ EM+  GV+PD+V ++T++  + R G+++  L  ++ M+  G              
Sbjct: 285 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 344

Query: 166 --------------LVP------DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                         L+P      D++ Y ++++G C+NG++ +AL + +E       +D 
Sbjct: 345 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 404

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y++++NGLCR   L E   + ++M + G  P+ Y    +I+G  +   +  AL  F  
Sbjct: 405 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGN 464

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K   P +VTYNTLI+G  K     +A  L  +M+ +   PN I+Y +L+NG C    
Sbjct: 465 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKK 524

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  LW + + KG KP +   N II G C SG    A +  S+M      P+ +++NT
Sbjct: 525 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNT 584

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+ GF +  + ++A  +   +   GL PD+I+YN+ L G C   R+ D+   L   +++G
Sbjct: 585 LMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 644

Query: 446 LNPDRSTYTTLINGHVS 462
           + P   T+  L+ G+++
Sbjct: 645 VLPTAITWNILVQGYLA 661



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 172/331 (51%), Gaps = 1/331 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L ++ K+D A      + +K    D++TY  L++  C+ G+L +A  ++       
Sbjct: 340 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 399

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                F Y+S+INGLC++GR D    VLD+M + G  P+    N ++    R   + +A 
Sbjct: 400 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDAL 459

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M  +G  P +V+++TLI   S+  +   A    +EM   G  P+ + Y++++NG 
Sbjct: 460 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGL 519

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  AL +  + LEKG   DV  +N I++GLC +  + +A  L++EM +R   P+ 
Sbjct: 520 CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNL 579

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T  TL+ G  K  +  +A  ++D + Q  ++PDI++YN  + G C    +  A     D
Sbjct: 580 VTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLND 639

Query: 301 MISRKISPNYISYGILINGYCSM-GHVTEAF 330
            + R + P  I++ IL+ GY ++ G++   F
Sbjct: 640 AVDRGVLPTAITWNILVQGYLALKGYMEPVF 670



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 6/156 (3%)

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE-GVDPDSISYNTLINGF 390
           +++ ++ +   P LV+       Y ++    +A +   +M    G  P   SYN+L+N  
Sbjct: 45  VFHHILKRLFDPKLVA-----HAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 99

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
           +     D+A +     E  GL P++ TYN+++   CR+ +   ++ +L  M  +G +PD 
Sbjct: 100 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDV 159

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            +Y TLIN       + +A +  DEM +RG  PD A
Sbjct: 160 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 195


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 157/494 (31%), Positives = 258/494 (52%), Gaps = 13/494 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +D AK F C + + G+ P   ++N LIN  C  G + EA +L + M+  G
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TYN L  G    G    A EV+ +ML  GLSPD  TY  LL   C+  N+    
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347

Query: 121 EIFCEMSRRGVAPD-IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M  RG   + I+  S ++    + G++D AL  F +MK+ GL PD V Y+I+I+G
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G    AL + DEM +K  + +  T+  +L GLC+  ML EA  L + ++  G   D
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I G+ K G + +AL LF ++ +  I P + T+N+LI G+CK   + +A K+  
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    ++P+ +SY  L++ Y + G+      L  EM  +GI PT V+ + I KG CR  
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587

Query: 360 DA------------SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
                          K  + L  M SEG+ PD I+YNT+I    R +++  AF  +  M+
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           ++ L     TYN+++   C  G +  ++  ++ + E+ ++  +  YTTLI  H  + + +
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707

Query: 468 EAFRFHDEMLQRGF 481
            A +   ++L RGF
Sbjct: 708 MAVKLFHQLLHRGF 721



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 233/458 (50%), Gaps = 10/458 (2%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR-CDRAKEVLD 89
           + ++ L+    R   ++++  ++  M  + L     +YNS++    +  +  D  KE+ D
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 184

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +        +  TY+T++   CR++ + +A         + + P +VSF++++  + + G
Sbjct: 185 K--------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG 236

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +D A  +F  +   GLVP    + I+ING C  G + EAL++  +M + G   D VTYN
Sbjct: 237 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +  G     M++ A ++  +ML++G+ PD  T+T L+ G C+ GN++  L L   M  +
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356

Query: 270 SIKPD-IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + + I+  + ++ G CK G +++A  L+  M +  +SP+ ++Y I+I+G C +G    
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 416

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+ EM  K I P   +   ++ G C+ G   +A   L  ++S G   D + YN +I+
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ +   +++A  L   +   G+ P V T+N ++ G+C+   + ++  IL  +   GL P
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 536

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              +YTTL++ + +  N K       EM   G  P + 
Sbjct: 537 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 195/405 (48%), Gaps = 13/405 (3%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVT-YNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           C+   ID   + L +M  +G   +++   + +++  C+ G ++EA  L N M   GL P 
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           +  Y+ +I+GLCK G+ D A  + DEM    + P++ T+  LL+  C+K  + EA  +  
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            +   G   DIV ++ +I  ++++G ++ AL  F+ +   G+ P    +  +I GYC+  
Sbjct: 458 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA K+ D +   G    VV+Y T+++           D+L  EM   G+ P   T++
Sbjct: 518 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYS 577

Query: 245 TLIHGHC---KDGNMNKALN--LFDI-------MTQKSIKPDIVTYNTLIDGFCKVGEME 292
            +  G C   K  N N  L   +F+        M  + I PD +TYNT+I   C+V  + 
Sbjct: 578 VIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS 637

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
            A      M SR +  +  +Y ILI+  C  G++ +A    Y +  + +  +  +  T+I
Sbjct: 638 GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 697

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
           K +C  GD   A +   +++  G +     Y+ +IN   R   M+
Sbjct: 698 KAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 177/369 (47%), Gaps = 12/369 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  +ID A     +M+  G+ PD V Y+ +I+  C+ G  + A  L + M  K 
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ GLC+KG    A+ +LD ++  G + D   YN ++    +   + EA 
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  +   G+ P + +F++LI  + +   +  A      +K  GL P  V YT +++ Y
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA------------KMLTEADDLF 228
              G      ++R EM  +G     VTY+ I  GLCR             ++  +     
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 608

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M   G+ PD  T+ T+I   C+  +++ A    +IM  +++     TYN LID  C  
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G + KA+     +  + +S +  +Y  LI  +C  G    A +L+++++ +G   ++   
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 728

Query: 349 NTIIKGYCR 357
           + +I   CR
Sbjct: 729 SAVINRLCR 737



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 59/117 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+   +  A +FL  M+ + +   + TYN LI++ C  G++ +A   + S+  + 
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           +    F Y +LI   C KG  + A ++  ++L  G +     Y+ ++   CR+  M+
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 153/482 (31%), Positives = 245/482 (50%), Gaps = 1/482 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C+      +   L  M +KG  PD +    LI  +     + +A ++M  +   G +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
           F YN+LING CK  R D A  VLD M     SPDT TYN ++   C +  +  A ++  +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           +      P +++++ LI      G +D AL    EM S GL PD   Y  II G C+ G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V  A +M   +  KGC  DV++YN +L  L       E + L  +M      P+  T++ 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI   C+DG + +A+NL  +M +K + PD  +Y+ LI  FC+ G ++ A +    MIS  
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ ++Y  ++   C  G   +A  ++ ++   G  P   S NT+      SGD  +A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
             + +M+S G+DPD I+YN++I+   RE  +D+AF L+  M +    P V+TYN++L GF
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C+  R+ D+  +L  M+  G  P+ +TYT LI G        EA    +++++   + + 
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY 578

Query: 486 AF 487
           +F
Sbjct: 579 SF 580



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 204/372 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ +LC   K+D A   L ++      P  +TY  LI A   EG ++EA +LM+ M  +G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP +FTYN++I G+CK+G  DRA E++  +   G  PD  +YN LL     +    E E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M      P++V++S LI    R+G+++ A+   + MK  GL PD   Y  +I  +
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A++  + M+  GC+ D+V YNT+L  LC+     +A ++F ++ E G  P+ 
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ T+       G+  +AL++   M    I PD +TYN++I   C+ G +++A +L  D
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S +  P+ ++Y I++ G+C    + +A  +   MVG G +P   +   +I+G   +G 
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558

Query: 361 ASKADEFLSKMV 372
            ++A E  + +V
Sbjct: 559 RAEAMELANDLV 570



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 205/407 (50%), Gaps = 4/407 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK ++ID A   L  M  K   PDTVTYN +I + C  G L+ A +++N +    
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY  LI     +G  D A +++DEML  GL PD  TYNT++   C++  +  A 
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   +  +G  PD++S++ L+      G+ +       +M S    P+ V Y+I+I   
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G + EA+ +   M EKG   D  +Y+ ++   CR   L  A +    M+  G  PD 
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T++   CK+G  ++AL +F  + +    P+  +YNT+       G+  +A  +  +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I P+ I+Y  +I+  C  G V EAF L  +M      P++V+ N ++ G+C++  
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF----VREENMDKAFALV 403
              A   L  MV  G  P+  +Y  LI G      R E M+ A  LV
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 190/376 (50%), Gaps = 1/376 (0%)

Query: 110 SCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD 169
           SCR  N  E+  +   M R+G  PD++  + LI  F     + +A+     ++  G  PD
Sbjct: 99  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPD 157

Query: 170 NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
              Y  +ING+C+   + +A ++ D M  K    D VTYN ++  LC    L  A  + N
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
           ++L     P   T+T LI     +G +++AL L D M  + +KPD+ TYNT+I G CK G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A ++  ++  +   P+ ISY IL+    + G   E  +L  +M  +   P +V+ +
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I   CR G   +A   L  M  +G+ PD+ SY+ LI  F RE  +D A   +  M + 
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G +PD++ YN +L   C+ G+   +  I  ++ E G +P+ S+Y T+ +   S  +   A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 470 FRFHDEMLQRGFVPDD 485
                EM+  G  PD+
Sbjct: 458 LHMILEMMSNGIDPDE 473



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 169/309 (54%), Gaps = 1/309 (0%)

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           I +  CR+G  +E+L + + M+ KG   DV+    ++ G    + + +A  +  E+LE+ 
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             PD + +  LI+G CK   ++ A  + D M  K   PD VTYN +I   C  G+++ A 
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           K+   ++S    P  I+Y ILI      G V EA +L  EM+ +G+KP + + NTII+G 
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+ G   +A E +  +  +G +PD ISYN L+   + +   ++   L++KM ++   P+V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           +TY++++T  CR G++ ++  +L  M EKGL PD  +Y  LI     +  L  A  F + 
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 476 MLQRGFVPD 484
           M+  G +PD
Sbjct: 394 MISDGCLPD 402



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 52/94 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LC++  +D A   L +M     +P  VTYN ++  +C+   +E+A  ++ SM G G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            +P   TY  LI G+   G    A E+ ++++++
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 157/494 (31%), Positives = 258/494 (52%), Gaps = 13/494 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +D AK F C + + G+ P   ++N LIN  C  G + EA +L + M+  G
Sbjct: 241 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 300

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TYN L  G    G    A EV+ +ML  GLSPD  TY  LL   C+  N+    
Sbjct: 301 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 360

Query: 121 EIFCEMSRRGVAPD-IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M  RG   + I+  S ++    + G++D AL  F +MK+ GL PD V Y+I+I+G
Sbjct: 361 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 420

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G    AL + DEM +K  + +  T+  +L GLC+  ML EA  L + ++  G   D
Sbjct: 421 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 480

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I G+ K G + +AL LF ++ +  I P + T+N+LI G+CK   + +A K+  
Sbjct: 481 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 540

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    ++P+ +SY  L++ Y + G+      L  EM  +GI PT V+ + I KG CR  
Sbjct: 541 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 600

Query: 360 DA------------SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
                          K  + L  M SEG+ PD I+YNT+I    R +++  AF  +  M+
Sbjct: 601 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 660

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           ++ L     TYN+++   C  G +  ++  ++ + E+ ++  +  YTTLI  H  + + +
Sbjct: 661 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 720

Query: 468 EAFRFHDEMLQRGF 481
            A +   ++L RGF
Sbjct: 721 MAVKLFHQLLHRGF 734



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 233/458 (50%), Gaps = 10/458 (2%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR-CDRAKEVLD 89
           + ++ L+    R   ++++  ++  M  + L     +YNS++    +  +  D  KE+ D
Sbjct: 138 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 197

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +        +  TY+T++   CR++ + +A         + + P +VSF++++  + + G
Sbjct: 198 K--------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG 249

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +D A  +F  +   GLVP    + I+ING C  G + EAL++  +M + G   D VTYN
Sbjct: 250 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 309

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +  G     M++ A ++  +ML++G+ PD  T+T L+ G C+ GN++  L L   M  +
Sbjct: 310 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 369

Query: 270 SIKPD-IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + + I+  + ++ G CK G +++A  L+  M +  +SP+ ++Y I+I+G C +G    
Sbjct: 370 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 429

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+ EM  K I P   +   ++ G C+ G   +A   L  ++S G   D + YN +I+
Sbjct: 430 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 489

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ +   +++A  L   +   G+ P V T+N ++ G+C+   + ++  IL  +   GL P
Sbjct: 490 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 549

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              +YTTL++ + +  N K       EM   G  P + 
Sbjct: 550 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 587



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 218/457 (47%), Gaps = 23/457 (5%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVT-YNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           C+   ID   + L +M  +G   +++   + +++  C+ G ++EA  L N M   GL P 
Sbjct: 351 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 410

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           +  Y+ +I+GLCK G+ D A  + DEM    + P++ T+  LL+  C+K  + EA  +  
Sbjct: 411 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 470

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            +   G   DIV ++ +I  ++++G ++ AL  F+ +   G+ P    +  +I GYC+  
Sbjct: 471 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 530

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA K+ D +   G    VV+Y T+++           D+L  EM   G+ P   T++
Sbjct: 531 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYS 590

Query: 245 TLIHGHC---KDGNMNKALN--LFDI-------MTQKSIKPDIVTYNTLIDGFCKVGEME 292
            +  G C   K  N N  L   +F+        M  + I PD +TYNT+I   C+V  + 
Sbjct: 591 VIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS 650

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
            A      M SR +  +  +Y ILI+  C  G++ +A    Y +  + +  +  +  T+I
Sbjct: 651 GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 710

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
           K +C  GD   A +   +++  G +     Y+ +IN   R   ++++      M +QG+ 
Sbjct: 711 KAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGIS 770

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           PD+    V++            EL+ W  I+ GL PD
Sbjct: 771 PDLDICEVMIKS---------DELLSW-TIKWGLLPD 797



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 201/426 (47%), Gaps = 22/426 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  +ID A     +M+  G+ PD V Y+ +I+  C+ G  + A  L + M  K 
Sbjct: 382 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 441

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+ +L+ GLC+KG    A+ +LD ++  G + D   YN ++    +   + EA 
Sbjct: 442 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 501

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  +   G+ P + +F++LI  + +   +  A      +K  GL P  V YT +++ Y
Sbjct: 502 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 561

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA------------KMLTEADDLF 228
              G      ++R EM  +G     VTY+ I  GLCR             ++  +     
Sbjct: 562 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 621

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M   G+ PD  T+ T+I   C+  +++ A    +IM  +++     TYN LID  C  
Sbjct: 622 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 681

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G + KA+     +  + +S +  +Y  LI  +C  G    A +L+++++ +G   ++   
Sbjct: 682 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 741

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           + +I   CR    +++  F   M+S+G+ PD              E M K+  L+S    
Sbjct: 742 SAVINRLCRRHLVNESKFFFCLMLSQGISPD----------LDICEVMIKSDELLSWTIK 791

Query: 409 QGLVPD 414
            GL+PD
Sbjct: 792 WGLLPD 797


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 143/396 (36%), Positives = 221/396 (55%), Gaps = 6/396 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LC   K   A   L +M      P+ VTYNT+I  +C  G ++   ++M  M  +G
Sbjct: 122 MLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREMRERG 177

Query: 61  -LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSE 118
            + P  +TY ++I+G CK G+ + A +V DEML  G + P+   YN L+   C + N+  
Sbjct: 178 GIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEV 237

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A     EM  RGV+  + +++  +      G+   A     EM   GL PD   Y I+IN
Sbjct: 238 ALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILIN 297

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYC+ G   +A+KM + M+ KG    VVTY ++++ L    M+ E D LFN+ + RG+ P
Sbjct: 298 GYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRP 357

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D + +  LI+ HC  G+M++A  +   M +K I PD VTYNTL+ G C +G +++A  L 
Sbjct: 358 DLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLI 417

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R I P+ +SY  LI+GY   G + +A ++  EM+GKG  PTL++ N +IKG C +
Sbjct: 418 EEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLN 477

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           G    A++ + +MV  G+ PD  +Y +LI G   E+
Sbjct: 478 GQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTED 513



 Score =  267 bits (682), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 141/400 (35%), Positives = 230/400 (57%), Gaps = 6/400 (1%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T+N ++  LC  G+  RA E+L +M     SP+  TYNT++   C +  +    EI  EM
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMREM 173

Query: 127 SRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV-PDNVLYTIIINGYCRNG 184
             RG +APD  +++T+I  + + G+++ A   F EM + G V P+ V+Y  +I GYC  G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            +  AL+ R EM+++G  M V TYN  ++ L       EA  L  EM E+G+ PD +T+ 
Sbjct: 234 NLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYN 293

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI+G+CK+G   KA+ +F++M  K I+  +VTY +LI      G +++ ++L+ D + R
Sbjct: 294 ILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRR 353

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            I P+   Y  LIN +C+ G +  AF +  EM  K I P  V+ NT+++G C  G   +A
Sbjct: 354 GIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEA 413

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
              + +M   G+ PD +SYNTLI+G+  + ++  A  +  +M  +G  P ++TYN ++ G
Sbjct: 414 RGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKG 473

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            C  G+  D+E ++  M+  G+ PD STY +LI G  +++
Sbjct: 474 LCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTED 513



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 211/399 (52%), Gaps = 6/399 (1%)

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           ++ ++ L   T T+N +L   C       A E+  +M     +P+ V+++T+I  F   G
Sbjct: 106 DIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARG 161

Query: 150 QLDRALMYFREMKS-AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV-MDVVT 207
           ++   +   REM+   G+ PD   Y  +I+G+C+ G V +A K+ DEML +G V  + V 
Sbjct: 162 RVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVM 221

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++ G C    L  A     EM++RGV     T+   +H    +G   +A  L + M 
Sbjct: 222 YNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMG 281

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +K + PD  TYN LI+G+CK G+ +KA K++  M+ + I    ++Y  LI+     G V 
Sbjct: 282 EKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQ 341

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           E  RL+ + V +GI+P L   N +I  +C  GD  +A E + +M  + + PD ++YNTL+
Sbjct: 342 ETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLM 401

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G      +D+A  L+ +M  +G+ PD+++YN +++G+  +G + D+  +   M+ KG N
Sbjct: 402 RGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFN 461

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P   TY  +I G        +A     EM+  G  PDD+
Sbjct: 462 PTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDS 500


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 256/486 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC+D +   A     EM++ G  P+ VTY TLI++  + G  +E   L+  M  +G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   + TY +L++ L K+G+ D  K+ L   L   LSP+  TY  L+   C+  N+ EAE
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  + ++P++V+FS++I  F + G LD+A  Y R MK  G+ P+ V Y  +I+G+
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      AL++  +ML +G  ++    ++++NGL +   + EA  LF +    G+  D 
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TTLI G  K G+M  A      +  +++ PD V YN  I+  C +G+ ++A     +
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  + P+  +Y  +I  +C  G   +A +L +EM    IKP L++ NT++ G   +G 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L++MVS G  P S+++  ++    +   +D    +   M N GL  D+  YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L   C  G    + ++L  M+  G+ PD  T+  LI GH   ++L  AF  + +ML + 
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 481 FVPDDA 486
             P+ A
Sbjct: 760 ISPNIA 765



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 255/515 (49%), Gaps = 36/515 (6%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFL----------------- 46
           A   DH    A   L EM ++GV  D VT NTL+   CR G +                 
Sbjct: 111 AALSDHA--HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWM 168

Query: 47  -----------------EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
                              A  + + M+ +GL   V  YN+L+ G C+ G+ D A+ VLD
Sbjct: 169 SSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
            M + G+ P+ ATY   +V  CR + + EA +++  M R GV  D+V+ S L+    R+G
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           +   A   FREM   G  P++V Y  +I+   + G   E L +  EM+ +G VMD+VTY 
Sbjct: 289 RFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +++ L +     E  D     L   + P+  T+T LI   CK  N+++A  +   M +K
Sbjct: 349 ALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEK 408

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
           SI P++VT++++I+GF K G ++KA +    M  R I+PN ++YG LI+G+        A
Sbjct: 409 SISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAA 468

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             ++++M+ +G+K      ++++ G  ++G   +A          G+  D ++Y TLI+G
Sbjct: 469 LEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDG 528

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             +  +M  AF    ++ ++ ++PD + YNV +   C  G+  +++  L  M   GL PD
Sbjct: 529 LFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPD 588

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +STY T+I  H  +    +A +   EM      P+
Sbjct: 589 QSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 225/438 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L ++ KI+ A     +    G+  D V Y TLI+   + G +  AF+    +  + 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    YN  IN LC  G+   AK  L EM  MGL PD +TYNT++V  CRK   ++A 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM    + P++++++TL+      G +++A     EM SAG  P ++ +  ++   
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++  +   L + + M+  G   D+  YNT+L  LC   M  +A  +  EML  G+ PD 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI GHCK  +++ A   +  M  ++I P+I T+NTL+ G   VG + +A  +  +
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + PN ++Y IL  G+    +  EA RL+ EMVGKG  P + + N +I  + ++G 
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A E    M   GV P S +Y+ L++G+ R  N  +    +  M+ +G  P   T + 
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909

Query: 421 ILTGFCRQGRMHDSELIL 438
           I   F + G    ++ +L
Sbjct: 910 ICRAFSKPGMTWQAQRLL 927



 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 253/519 (48%), Gaps = 35/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK H +D A+  L EME+K + P+ VT++++IN + + G L++A +    M  +G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 61  LKPGVFTY-----------------------------------NSLINGLCKKGRCDRAK 85
           + P V TY                                   +SL+NGL + G+ + A 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  +    GLS D   Y TL+    +  +M  A +   E+  R + PD V ++  I   
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+   A  +  EM++ GL PD   Y  +I  +CR G   +ALK+  EM       ++
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TYNT++ GL     + +A  L NEM+  G  P   T   ++    +   ++  L++ + 
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    +  DI  YNTL+   C  G   KA  +  +M+   I+P+ I++  LI G+C   H
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  AF  + +M+ + I P + + NT++ G    G   +A   L +M   G++P++++Y+ 
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L  G  ++ N  +A  L  +M  +G VP V TYN +++ F + G M  ++ +   M ++G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++P   TY  L++G     N  E  +   +M ++GF P 
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPS 903



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 193/370 (52%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N LC   K   AK FL EM   G+ PD  TYNT+I ++CR+G   +A +L++ M    +
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP + TYN+L+ GL   G  ++AK +L+EM+  G SP + T+  +L    +   +    +
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           I   M   G+  DI  ++TL+ +   +G   +A +   EM  +G+ PD + +  +I G+C
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++  +  A     +ML +    ++ T+NT+L GL     + EA  +  EM + G+ P+  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  L  GH K  N  +A+ L+  M  K   P + TYN LI  F K G M +A +L+ DM
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R + P   +Y IL++G+  + + TE  +   +M  KG  P+  + + I + + + G  
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 362 SKADEFLSKM 371
            +A   L  +
Sbjct: 921 WQAQRLLKNL 930



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 115/231 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC       A + L EM   G+ PDT+T+N LI  +C+   L+ AF     M  + 
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + T+N+L+ GL   GR   A  VL EM + GL P+  TY+ L     ++ N  EA 
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++CEM  +G  P + +++ LI  F++ G + +A   F++M+  G+ P +  Y I+++G+
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            R     E  K   +M EKG      T + I     +  M  +A  L   +
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/94 (22%), Positives = 45/94 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K   +  AK    +M+++GV+P + TY+ L++ + R     E  + +  M  KG
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
             P   T + +     K G   +A+ +L  + ++
Sbjct: 900 FSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 166/553 (30%), Positives = 275/553 (49%), Gaps = 70/553 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LC+D +   A     EM++ GV P+ VTY TLI++  +     E+  L+  M  +G
Sbjct: 298 LVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRG 357

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   +  Y +L++ L K+G+ + AK+VL       ++P+  TY  L+   CR  N+  AE
Sbjct: 358 VVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAE 417

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M  + V P++V+FS++I    + G L +A  Y R+MK +G+ P+ V Y  +I+G+
Sbjct: 418 QVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGF 477

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      AL +  +ML +G   +    ++++NGL +   +  A+ LF +M ERG+  D 
Sbjct: 478 FKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDH 537

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV------------------------ 276
             +TTL+ G  K GNM  A  +   + +K++ PD V                        
Sbjct: 538 VNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKE 597

Query: 277 -----------TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                      TYNT+I   C+ G+  KA KL  +M    I PN I+Y  L+ G    G 
Sbjct: 598 MRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGV 657

Query: 326 VTEAFRLWYEMVGKGIKPT-------LVSC----------------------------NT 350
           V +A  L  EM   G  PT       L +C                            NT
Sbjct: 658 VKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNT 717

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++   C  G A  A   L +M++ G+ PD+I++N LI G  +  ++D AFA+ ++M +QG
Sbjct: 718 LVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG 777

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           L P++ T+N +L G    GR+ +++ +L  M + GL P+  TY  L+ G+  ++N  EA 
Sbjct: 778 LSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEAL 837

Query: 471 RFHDEMLQRGFVP 483
           R + EM+ +GF+P
Sbjct: 838 RLYCEMVSKGFIP 850



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 240/456 (52%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D V +N LI+ YC+   +  A  ++  M+ +G+   V  YNSL+ G    G  D A EV+
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           + M   G+ P+  TY  L+ E C+ + M EA  ++  M R GV PD+V+ S L+    R+
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRD 305

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           GQ   A   FREM   G+ P++V Y  +I+   +     E+L +  EM+ +G VMD+V Y
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
             +++ L +   + EA D+        + P+F T+T L+  HC+ GN++ A  +   M +
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE 425

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           KS+ P++VT++++I+G  K G + KA      M    I+PN ++YG LI+G+        
Sbjct: 426 KSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEA 485

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  ++ +M+ +G++      ++++ G  ++G+   A+     M   G+  D ++Y TL++
Sbjct: 486 ALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMD 545

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  +  NM  AF +  ++  + L PD + YNV +   C  G+  +++  L  M   GL P
Sbjct: 546 GLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEP 605

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D++TY T+I     +    +A +   EM +    P+
Sbjct: 606 DQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPN 641



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/441 (31%), Positives = 234/441 (53%), Gaps = 6/441 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L K+  I+ A+    +M+++G+  D V Y TL++   + G +  AF++   +  K 
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    YN  IN LC  G+   AK  L EM   GL PD ATYNT++   CR+   S+A 
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII--- 177
           ++  EM R  + P++++++TL+      G + +A     EM SAG  P ++ +  ++   
Sbjct: 628 KLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQAC 687

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G  R   +LE   + + M+  G   D+  YNT+++ LC   M   A  + +EML RG+ 
Sbjct: 688 SGSRRPDVILE---IHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIA 744

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  TF  LI GHCK  +++ A  ++  M  + + P+I T+NTL+ G    G + +A+ +
Sbjct: 745 PDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTV 804

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
            +DM    + PN ++Y IL+ GY    +  EA RL+ EMV KG  P   + N+++  + +
Sbjct: 805 LSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAK 864

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +G  ++A E  S+M   GV   S +Y+ L+NG+ +  N  +   L+  M+  G  P   T
Sbjct: 865 AGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGT 924

Query: 418 YNVILTGFCRQGRMHDSELIL 438
            + +   F R G   ++  +L
Sbjct: 925 ISSMSRAFSRPGMTGEARRLL 945



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 247/483 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K   +  A  ++ +M+  G+ P+ VTY TLI+ + +    E A  +   M  +G
Sbjct: 438 IINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEG 497

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++   F  +SL+NGL K G  + A+ +  +M + GL  D   Y TL+    +  NM  A 
Sbjct: 498 VEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAF 557

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E+  + ++PD V ++  I      G+   A  + +EM++ GL PD   Y  +I   
Sbjct: 558 KVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAAR 617

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G   +ALK+  EM       +++TY T++ GL  A ++ +A  L NEM   G  P  
Sbjct: 618 CREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTS 677

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T   ++         +  L + ++M    +  DI  YNTL+   C  G    A  +  +
Sbjct: 678 LTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDE 737

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++R I+P+ I++  LI G+C   H+  AF ++ +M+ +G+ P + + NT++ G   +G 
Sbjct: 738 MLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGR 797

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +AD  LS M   G++P++++Y+ L+ G+ ++ N  +A  L  +M ++G +P   TYN 
Sbjct: 798 IGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNS 857

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++ F + G M+ ++ +   M  +G+    STY  L+NG     N  E      +M + G
Sbjct: 858 LMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELG 917

Query: 481 FVP 483
           F P
Sbjct: 918 FKP 920



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 246/462 (53%), Gaps = 4/462 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V  DTV+YN  + A   +G    A  +++ M  +G+     T ++ + GLC+ G    A 
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 86  EVLDEMLQMGLSP---DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
             L EML  G      D   +N L+   C+ ++M+ A  +   M+ +GVA D+V +++L+
Sbjct: 171 -ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLV 229

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F  +G  D AL     MK+ G+ P+ V YT +I  YC+   + EA  + + M+  G +
Sbjct: 230 AGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVL 289

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DVVT + +++GLCR    +EA  LF EM + GV P+  T+ TLI    K    +++L L
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
              M  + +  D+V Y  L+D   K G++E+A  +     S  I+PN+++Y +L++ +C 
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCR 409

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G++  A ++  +M  K + P +V+ ++II G  + G   KA +++ KM   G+ P+ ++
Sbjct: 410 AGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVT 469

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y TLI+GF + +  + A  +   M ++G+  +    + ++ G  + G +  +E +   M 
Sbjct: 470 YGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMD 529

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           E+GL  D   YTTL++G     N+  AF+   E++++   PD
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPD 571



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 241/475 (50%), Gaps = 2/475 (0%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGKGLKP-GVFTYNSL 71
           A   L EM ++GV  D VT +T +   CR G + EA  L   +  G+G+    V  +N+L
Sbjct: 134 APPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNAL 193

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I+G CK      A  V++ M   G++ D   YN+L+       +   A E+   M   GV
Sbjct: 194 IDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGV 253

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P++V+++ LIG + +   +D A   +  M  +G++PD V  + +++G CR+G   EA  
Sbjct: 254 EPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYA 313

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  EM + G   + VTY T+++ L +A+  +E+  L  EM+ RGV  D   +T L+    
Sbjct: 314 LFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLG 373

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K+G + +A ++       +I P+ VTY  L+D  C+ G ++ A ++   M  + + PN +
Sbjct: 374 KEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVV 433

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           ++  +ING    G + +A     +M   GI P +V+  T+I G+ +      A +    M
Sbjct: 434 TFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDM 493

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           + EGV+ ++   ++L+NG  +  N++ A AL   M+ +GL+ D + Y  ++ G  + G M
Sbjct: 494 LHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNM 553

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +  +   ++EK L+PD   Y   IN   +     EA  F  EM   G  PD A
Sbjct: 554 PAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQA 608



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 248/542 (45%), Gaps = 70/542 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+A C+   ID A+  L +ME+K V P+ VT++++IN   + G L +A   M  M   G
Sbjct: 403 LVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSG 462

Query: 61  LKPGVFTY-----------------------------------NSLINGLCKKGRCDRAK 85
           + P V TY                                   +SL+NGL K G  + A+
Sbjct: 463 IAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAE 522

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  +M + GL  D   Y TL+    +  NM  A ++  E+  + ++PD V ++  I   
Sbjct: 523 ALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCL 582

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+   A  + +EM++ GL PD   Y  +I   CR G   +ALK+  EM       ++
Sbjct: 583 CTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNL 642

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFP--------------------------- 238
           +TY T++ GL  A ++ +A  L NEM   G  P                           
Sbjct: 643 ITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHEL 702

Query: 239 --------DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
                   D   + TL+H  C  G    A  + D M  + I PD +T+N LI G CK   
Sbjct: 703 MMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSH 762

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           ++ A  ++A M+ + +SPN  ++  L+ G  S G + EA  +  +M   G++P  ++ + 
Sbjct: 763 LDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDI 822

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++ GY +  +  +A     +MVS+G  P + +YN+L++ F +   M++A  L S+M+ +G
Sbjct: 823 LVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRG 882

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           ++    TY+++L G+ +     +  ++L  M E G  P + T +++           EA 
Sbjct: 883 VLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEAR 942

Query: 471 RF 472
           R 
Sbjct: 943 RL 944



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 199/374 (53%), Gaps = 8/374 (2%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N LC   K   AK FL EM   G+ PD  TYNT+I A CREG   +A +L+  M    +
Sbjct: 579 INCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSI 638

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC----RKENMS 117
           KP + TY +L+ GL + G   +AK +L+EM   G +P + T+  +L ++C    R + + 
Sbjct: 639 KPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVL-QACSGSRRPDVIL 697

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           E  E+   M   G+  DI  ++TL+ +   +G    A +   EM + G+ PD + +  +I
Sbjct: 698 EIHEL---MMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALI 754

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G+C++  +  A  +  +ML +G   ++ T+NT+L GL  A  + EAD + ++M + G+ 
Sbjct: 755 LGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLE 814

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  L+ G+ K  N  +AL L+  M  K   P   TYN+L+  F K G M +A +L
Sbjct: 815 PNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKEL 874

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +++M  R +     +Y IL+NG+  + +  E   L  +M   G KP+  + +++ + + R
Sbjct: 875 FSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSR 934

Query: 358 SGDASKADEFLSKM 371
            G   +A   L  +
Sbjct: 935 PGMTGEARRLLKTL 948



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 126/235 (53%), Gaps = 4/235 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LC      +A + L EM  +G+ PDT+T+N LI  +C+   L+ AF +   M  +G
Sbjct: 718 LVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG 777

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + T+N+L+ GL   GR   A  VL +M ++GL P+  TY+ L+    +K N  EA 
Sbjct: 778 LSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEAL 837

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++CEM  +G  P   ++++L+  F++ G +++A   F EMK  G++  +  Y I++NG+
Sbjct: 838 RLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW 897

Query: 181 C--RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
              RNG  +E   +  +M E G      T +++     R  M  EA  L   + +
Sbjct: 898 SKLRNG--IEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 247/457 (54%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    +  L+ +  +         L   M   G+ P V+T   +IN  C   R D A  V
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  PDTAT+ TL+   C    + EA ++F +M   G  P++V++ TL+    +
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           + QL  AL  F EM + G+ PD   Y  +I+  C          + +EM++   + +VV+
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
            N +++ LC+   +TEA D+ + M++ GV PD  T+  L+ GHC    M++A+ +FD+M 
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +     ++V+YNTLI+G+CK+  ++KA  L+ +M  +++ PN ++Y  LI+G C +G + 
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQ 353

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EMV  G  P LV+ + ++   C++   ++A   L  +    +DPD   YN  I
Sbjct: 354 DAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAI 413

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  R  +++ A  L S +  +GL PDV T+N+++ G C++G + ++  +   M E G  
Sbjct: 414 DGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCL 473

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  TY T+  G +  N    A +  +EML RGF  D
Sbjct: 474 RNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSAD 510



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 241/452 (53%), Gaps = 1/452 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ PD  T   +IN++C    ++ A  ++  +   G +P   T+ +L+ GLC  G
Sbjct: 81  KMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVG 140

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A +V D+M+  G  P+  TY TL+   C+   ++EA  +F EM  +G++PDI +++
Sbjct: 141 KIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYN 200

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           +LI       +         EM  + ++P+ V   I+++  C+ G V EA  + D M++ 
Sbjct: 201 SLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQG 260

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   DVVTY  +++G C    + EA  +F+ M+  G   +  ++ TLI+G+CK   ++KA
Sbjct: 261 GVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKA 320

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + LF+ M ++ + P+ +TY+TLI G C VG ++ A  L+ +M++    PN ++Y IL++ 
Sbjct: 321 MYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDY 380

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C    + EA  L   + G  + P +   N  I G CR+GD   A +  S +   G+ PD
Sbjct: 381 LCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPD 440

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             ++N +I G  +   +D+A  L  +M+  G + +  TYN I  G  +  +   +  +L 
Sbjct: 441 VWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLE 500

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            M+ +G + D ST T L+   +S + L ++ +
Sbjct: 501 EMLARGFSADVST-TALLVKMLSDDGLDQSVK 531



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 226/422 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C  +++D A   L ++ + G  PDT T+ TL+   C  G + EA  + + M G+G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +L+NGLCK  +   A  +  EM+  G+SPD  TYN+L+   C         
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM +  + P++VS + ++    + G++  A      M   G+ PD V Y  +++G+
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA+K+ D M+  GCV +VV+YNT++NG C+ + + +A  LF EM  + + P+ 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLIHG C  G +  A+ LF+ M      P++VTY+ L+D  CK   + +A  L   
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+   Y I I+G C  G +  A  L+  +  +G++P + + N +I+G C+ G 
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +   +M   G   +  +YNT+  G ++     +A  L+ +M  +G   DV T  +
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTAL 516

Query: 421 IL 422
           ++
Sbjct: 517 LV 518



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 219/435 (50%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L++A    + M      P +F +  L+  + K         +  +M   G+ PD  T   
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   C    +  A  +  ++ + G  PD  +F+TL+      G++  AL  F +M   G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+ V Y  ++NG C++  + EAL +  EM+ KG   D+ TYN++++ LC         
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            L NEM++  + P+  +   ++   CK+G + +A ++ D+M Q  ++PD+VTY  L+DG 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C   EM++A K++  M+      N +SY  LINGYC +  + +A  L+ EM  + + P  
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++ +T+I G C  G    A    ++MV+ G  P+ ++Y+ L++   +   + +A AL+  
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +E   L PDV  YN+ + G CR G +  +  +   +  +GL PD  T+  +I G   +  
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 466 LKEAFRFHDEMLQRG 480
           L EA +   EM + G
Sbjct: 457 LDEASKLFREMDENG 471



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 201/393 (51%), Gaps = 2/393 (0%)

Query: 94  MGLSPD--TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           + L P   +++ N    +S     + +A   F  M      P I  F+ L+   ++    
Sbjct: 13  LSLPPHFLSSSQNNFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHY 72

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
              L   ++M S G+ PD    TI+IN +C    V  AL +  ++L+ G   D  T+ T+
Sbjct: 73  STVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTL 132

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           + GLC    + EA D+F++M+  G  P+  T+ TL++G CKD  + +ALNLF  M  K I
Sbjct: 133 VRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGI 192

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            PDI TYN+LI   C + E +    L  +M+  KI PN +S  I+++  C  G VTEA  
Sbjct: 193 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHD 252

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +   M+  G++P +V+   ++ G+C   +  +A +    MV  G   + +SYNTLING+ 
Sbjct: 253 VVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYC 312

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           + + +DKA  L  +M  Q L+P+ +TY+ ++ G C  GR+ D+  +   M+  G  P+  
Sbjct: 313 KIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLV 372

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TY+ L++     + L EA      +      PD
Sbjct: 373 TYSILLDYLCKNHRLAEAMALLKAIEGSNLDPD 405



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 193/353 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCKD ++  A     EM  KG+ PD  TYN+LI+A C     +    L+N M    
Sbjct: 167 LMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSK 226

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V + N +++ LCK+G+   A +V+D M+Q G+ PD  TY  L+   C +  M EA 
Sbjct: 227 IMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAV 286

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R G   ++VS++TLI  + +  ++D+A+  F EM    L+P+ + Y+ +I+G 
Sbjct: 287 KVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGL 346

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A+ + +EM+  G + ++VTY+ +L+ LC+   L EA  L   +    + PD 
Sbjct: 347 CHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDV 406

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +   I G C+ G++  A +LF  +  + ++PD+ T+N +I G CK G +++A+KL+ +
Sbjct: 407 QVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFRE 466

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           M       N  +Y  +  G       + A +L  EM+ +G    + +   ++K
Sbjct: 467 MDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVK 519



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 132/289 (45%), Gaps = 35/289 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTY--------------------------- 33
           +V+ALCK+ K+  A   +  M Q GV PD VTY                           
Sbjct: 237 VVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNG 296

Query: 34  --------NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                   NTLIN YC+   +++A  L   M  + L P   TY++LI+GLC  GR   A 
Sbjct: 297 CVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAI 356

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            + +EM+  G  P+  TY+ LL   C+   ++EA  +   +    + PD+  ++  I   
Sbjct: 357 ALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGM 416

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G L+ A   F  +   GL PD   + I+I G C+ G + EA K+  EM E GC+ + 
Sbjct: 417 CRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNG 476

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
            TYNTI  GL +    + A  L  EML RG   D  T   L+     DG
Sbjct: 477 CTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 40/93 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCK   +D A     EM++ G   +  TYNT+     +      A QL+  M  +G
Sbjct: 447 MIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG 506

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
               V T   L+  L   G     K++L E ++
Sbjct: 507 FSADVSTTALLVKMLSDDGLDQSVKQILCEFMR 539


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 161/505 (31%), Positives = 261/505 (51%), Gaps = 27/505 (5%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           ++ K+DS      +M   GV P+T T N LI   C  G  E+A ++ + M  KG +P  F
Sbjct: 128 REDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEF 187

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           ++  L+ G C+ G   RA E+LD M   G+ P+   YNTL+   CR+    EAE +   M
Sbjct: 188 SFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERM 247

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK---SAGLV-PDNVLYTIIINGYCR 182
              G+ PD+V+F++ I      G++  A   FR+M+     GL  P+   + +++ G+C+
Sbjct: 248 REDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCK 307

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G + EA  + + M   G +M++ +YN  L GL R   L EA     EM+++G+ P+ Y+
Sbjct: 308 EGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYS 367

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           F T++ G CK+G ++ A  +  +M    I PD VTY+TL+ G C  G++ KAN +  +M+
Sbjct: 368 FNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMM 427

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
            R  SPN  +  IL++     G + EA +L  +M  +      V+CN +I G C+SG   
Sbjct: 428 RRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLD 487

Query: 363 KADEFLSKMVSEG--------------VD---------PDSISYNTLINGFVREENMDKA 399
           +A E +  M   G              VD         PD I+Y+ +ING  +   +D+A
Sbjct: 488 EAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEA 547

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
                +M  + L PD I Y+  +  FC+ G++  +  +L  M ++G N    TY +LI G
Sbjct: 548 RKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILG 607

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
             S+N + E +   D+M ++G  P+
Sbjct: 608 LGSKNQIFEIYGLLDDMKEKGITPN 632



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 241/514 (46%), Gaps = 64/514 (12%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGK--GLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           V+   LI    + G  + AF    S   +     P V+ YN ++    ++ + D    + 
Sbjct: 80  VSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLY 139

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            +M+  G+SP+T T N L+   C      +A E+F +M  +G  P+  SF  L+  + R 
Sbjct: 140 KDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G   RAL     M S G+ P+ V+Y  +I+ +CR G   EA ++ + M E G   DVVT+
Sbjct: 200 GLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTF 259

Query: 209 NTILNGLCRAKMLTEADDLFNEML---ERGV-FPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           N+ ++ LC A  + EA  +F +M    E G+  P+  TF  ++ G CK+G + +A  L +
Sbjct: 260 NSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVE 319

Query: 265 IMTQ-----------------------------------KSIKPDIVTYNTLIDGFCKVG 289
            M +                                   K I+P+I ++NT++DG CK G
Sbjct: 320 SMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNG 379

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +  A  +   MIS  I P+ ++Y  L++G CS G V +A  + +EM+ +G  P   +CN
Sbjct: 380 LISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCN 439

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            ++    + G   +A++ L KM     D D+++ N +I+G  +   +D+A  +V  M   
Sbjct: 440 ILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIH 499

Query: 410 G-----------------------LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           G                        +PD+ITY++I+ G C+ GR+ ++      M+ K L
Sbjct: 500 GSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSL 559

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +PD   Y T I+       +  AFR   +M +RG
Sbjct: 560 HPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 240/500 (48%), Gaps = 57/500 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   CK+  ++ AK  +  M++ G   +  +YN  +    R G L EA   +  M  KG
Sbjct: 301 MLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKG 360

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P ++++N++++GLCK G    A+ ++  M+  G+ PDT TY+TLL   C    + +A 
Sbjct: 361 IEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKAN 420

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM RRG +P+  + + L+    + G++  A    ++M       DNV   I+I+G 
Sbjct: 421 NILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGL 480

Query: 181 CRNGFVLEALKMRDEMLEKG-----------------------CVMDVVTYNTILNGLCR 217
           C++G + EA+++ + M   G                       C+ D++TY+ I+NGLC+
Sbjct: 481 CKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCK 540

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
           A  L EA   F EM+ + + PD   + T IH  CK G ++ A  +   M ++     + T
Sbjct: 541 AGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQT 600

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           YN+LI G     ++ +   L  DM  + I+PN  +Y  +I+  C  G + +A  L  EM+
Sbjct: 601 YNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEML 660

Query: 338 GKGIKPTLVSCNTIIKGYCRS----------------------------------GDASK 363
            KGI P + S   +IK +C++                                  G+ S+
Sbjct: 661 QKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSE 720

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E     +    D  +  YN LI    ++E ++ A  ++ KM ++G   D  ++  ++ 
Sbjct: 721 AKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVID 780

Query: 424 GFCRQGRMHDSELILWRMIE 443
           G  ++G+ HD++ +  RM++
Sbjct: 781 GLGKRGKKHDADELAERMMD 800



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 187/358 (52%), Gaps = 4/358 (1%)

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
           P +  ++ ++    R  ++D     +++M  AG+ P+     ++I G C +G   +A ++
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
            D+M  KGC  +  ++  ++ G CRA +   A +L + M   GV P+   + TLI   C+
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM-ISRKIS---P 308
           +G   +A  L + M +  + PD+VT+N+ I   C  G++ +A++++ DM I  ++    P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N  ++ +++ G+C  G + EA  L   M   G    L S N  + G  R+G   +A   L
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +MV +G++P+  S+NT+++G  +   +  A  ++  M + G+ PD +TY+ +L G C  
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCST 413

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G++  +  IL  M+ +G +P+  T   L++    +  + EA +   +M +R +  D+ 
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNV 471



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 139/272 (51%), Gaps = 6/272 (2%)

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK--SIK 272
           L RAKM+++ D L   +L++       +   LI    K G  + A + F     +  +  
Sbjct: 54  LIRAKMISQIDHLQQLLLQQPQEVSHVSLIALIRILAKSGLSDLAFSQFQSFRSQVPANP 113

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P +  YN +++   +  +++  + L+ DM+   +SP   +  +LI G C  G   +A  +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + +M  KG +P   S   +++GYCR+G + +A E L  M S GV P+ + YNTLI+ F R
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI---EKGL-NP 448
           E   ++A  LV +M   GL PDV+T+N  ++  C  G++ ++  I   M    E GL  P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + +T+  ++ G   +  L+EA    + M + G
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNG 325



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN LI   C++  LE A  +++ M  KG +    ++  +I+GL K+G+   A E+ + M+
Sbjct: 740 YNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMM 799

Query: 93  QMG 95
            M 
Sbjct: 800 DMA 802


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 155/481 (32%), Positives = 260/481 (54%), Gaps = 5/481 (1%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +D K+D A     +M +   +P  V ++ L++A  +    +    L   M   G+   ++
Sbjct: 52  QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TY+  IN  C++ +   A  +L +M+++G  P   T N+LL   C    +SEA  +  +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 127 SRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
              G  PD V+F+TL+ G+F  N +   A+     M   G  PD V Y  +ING C+ G 
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHN-KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230

Query: 186 VLEALKMRDEMLEKGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
              AL + ++M EKG +  DVV YNTI++GLC+ K + +A DLFN+M  +G+ PD +T+ 
Sbjct: 231 PDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI-S 303
            LI   C  G  + A  L   M +K+I PD+V +N LID F K G++ +A KL+ +M+ S
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           +   P+ ++Y  LI G+C    V E   ++ EM  +G+    V+  T+I G+ ++ D   
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A     +MVS+GV PD ++YN L++G     N++ A  +   M+ + +  D++TY  ++ 
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             C+ G++ D   +   +  KG+ P+  TYTT+++G   +   +EA     EM + G +P
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529

Query: 484 D 484
           +
Sbjct: 530 N 530



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 141/437 (32%), Positives = 242/437 (55%), Gaps = 2/437 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C  ++I  A   + +M + G  PDTVT+ TL++   +     EA  L+  M  KG
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TY ++INGLCK+G  D A  +L++M +  +  D   YNT++   C+ ++M +A 
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M  +G+ PD+ +++ LI      G+   A     +M    + PD V +  +I+ +
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330

Query: 181 CRNGFVLEALKMRDEMLE-KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            + G ++EA K+ DEM++ K C  DVV YNT++ G C+ K + E  ++F EM +RG+  +
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTLIHG  +  + + A  +F  M    + PDI+TYN L+DG C  G +E A  ++ 
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  R +  + ++Y  +I   C  G V + + L+  +  KG+KP +V+  T++ G+CR G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +AD    +M  +G  P+S +YNTLI   +R+ +   +  L+ +M + G   D  T+ 
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570

Query: 420 VILTGFCRQGRMHDSEL 436
           ++ T     GR+  S L
Sbjct: 571 LV-TNMLHDGRLDKSFL 586



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 249/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K +K D       +M+  G+  +  TY+  IN +CR   L  A  ++  M   G
Sbjct: 81  LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + T NSL+NG C   R   A  ++D+M++MG  PDT T+ TL+    +    SEA 
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G  PD+V++  +I    + G+ D AL    +M+   +  D V+Y  II+G 
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A  + ++M  KG   DV TYN +++ LC     ++A  L ++MLE+ + PD 
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQ-KSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             F  LI    K+G + +A  L+D M + K   PD+V YNTLI GFCK   +E+  +++ 
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R +  N ++Y  LI+G+        A  ++ +MV  G+ P +++ N ++ G C +G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +   A      M    +  D ++Y T+I    +   ++  + L   +  +G+ P+V+TY 
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +++GFCR+G   +++ +   M E G  P+  TY TLI   +   +   +     EM   
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560

Query: 480 GFVPD 484
           GF  D
Sbjct: 561 GFAGD 565



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 134/267 (50%)

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           L +A  LF +M++   FP    F+ L+    K    +  ++L + M    I  ++ TY+ 
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
            I+ FC+  ++  A  +   M+     P+ ++   L+NG+C    ++EA  L  +MV  G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
            +P  V+  T++ G  +   AS+A   + +MV +G  PD ++Y  +ING  +    D A 
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L++KME   +  DV+ YN I+ G C+   M D+  +  +M  KG+ PD  TY  LI+  
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            +     +A R   +ML++   PD  F
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVF 322


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 261/485 (53%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    ++SA     E+ + GV P+   ++ LI    + G +E+A +L   M   G
Sbjct: 333 LIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMG 392

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P VF  N L+ G  K+   + A  +LD  ++ G++    TYN +L+  C    ++EA 
Sbjct: 393 LQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEAC 451

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +M  +G+ P +VS++ +I    + G +D A      +  +GL P+ + YTI++ G 
Sbjct: 452 NLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGS 511

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A  M D+M+  G V    T+N+I+NGLC+   ++EA D  N  +++   P  
Sbjct: 512 FKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTS 571

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I G+ K+G ++ A +++  M +  I P+++TY +LI+GFCK  +M+ A K+  D
Sbjct: 572 MTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDD 631

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + +  +   Y  LI G+C M  +  A + + +++  G+ P  +  N +I  Y    +
Sbjct: 632 MKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNN 691

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M++  +  D   Y +LI+G ++E  +  A  L S+M  +G+VPD+  YNV
Sbjct: 692 MEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNV 751

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C  G++ ++  IL  M    + P    Y TLI GH  + NL+EAFR HDEML +G
Sbjct: 752 LINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKG 811

Query: 481 FVPDD 485
            VPDD
Sbjct: 812 LVPDD 816



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 245/451 (54%), Gaps = 1/451 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ++ A      M+  G+ P     N L+  + ++  LE A+ L++     G+   V TYN 
Sbjct: 378 VEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNI 436

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           ++  LC+ G+ + A  + D+M+  G++P   +YN +++  C+K  M +A E+   +   G
Sbjct: 437 VLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESG 496

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + P+ ++++ L+    + G  + A   F +M +AG+VP +  +  IING C+ G V EA 
Sbjct: 497 LKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEAR 556

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
              +  +++  +   +TYN I++G  +   +  A+ ++ EM    + P+  T+T+LI+G 
Sbjct: 557 DKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGF 616

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK   M+ AL + D M +K ++ DI  Y TLI GFCK+ +ME A K ++ ++   ++PN 
Sbjct: 617 CKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNT 676

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           I Y I+I+ Y ++ ++  A  L  EM+   I   L    ++I G  + G  S A +  S+
Sbjct: 677 IVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSE 736

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+  G+ PD   YN LING      ++ A  ++ +M+   + P V+ YN ++ G  ++G 
Sbjct: 737 MLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGN 796

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           + ++  +   M++KGL PD +TY  L+NG +
Sbjct: 797 LQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 827



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 218/385 (56%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC+  K++ A     +M  KG+ P  V+YN +I  +C++G +++A ++MN +   GLKP 
Sbjct: 441 LCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPN 500

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
             TY  L+ G  KKG C+ A  + D+M+  G+ P   T+N+++   C+   +SEA +   
Sbjct: 501 AITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLN 560

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
              ++   P  ++++ +I  + + G +D A   +REM  + + P+ + YT +ING+C++ 
Sbjct: 561 TFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSN 620

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            +  ALKM D+M  KG  +D+  Y T++ G C+ + +  A   F+++LE G+ P+   + 
Sbjct: 621 KMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYN 680

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            +I  +    NM  ALNL   M    I  D+  Y +LIDG  K G++  A  L+++M+ R
Sbjct: 681 IMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCR 740

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            I P+   Y +LING C+ G +  A ++  EM G  I PT++  NT+I G+ + G+  +A
Sbjct: 741 GIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEA 800

Query: 365 DEFLSKMVSEGVDPDSISYNTLING 389
                +M+ +G+ PD  +Y+ L+NG
Sbjct: 801 FRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 249/512 (48%), Gaps = 36/512 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A+ + + ++ A     EM ++ +Y D  T   L+ A  + G   EA +     +G+G
Sbjct: 193 LLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRG 252

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY----------------- 103
           LK    +Y+ +I  +C+    D A ++++   ++G  P   TY                 
Sbjct: 253 LKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEAL 312

Query: 104 ------------------NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                              +L+   C + +++ A  +F E+   GV P++  FS LI   
Sbjct: 313 RLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWC 372

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S+ G +++A   +  MK  GL P   +   ++ G+ +   +  A  + D  +E G +  V
Sbjct: 373 SKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENG-IASV 431

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYN +L  LC    + EA +L+++M+ +G+ P   ++  +I GHCK G M+ A  + + 
Sbjct: 432 VTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNG 491

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           + +  +KP+ +TY  L++G  K G+ E A  ++  M++  I P   ++  +ING C +G 
Sbjct: 492 IIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGR 551

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V+EA       + +   PT ++ N II GY + G    A+    +M    + P+ I+Y +
Sbjct: 552 VSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTS 611

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LINGF +   MD A  +   M+ +GL  D+  Y  ++ GFC+   M ++     +++E G
Sbjct: 612 LINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVG 671

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           L P+   Y  +I+ + + NN++ A   H EM+
Sbjct: 672 LTPNTIVYNIMISAYRNLNNMEAALNLHKEMI 703



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 228/456 (50%), Gaps = 1/456 (0%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D+  +N L+ +Y R   + EA +   +M   G+ P V   N L+  + ++   + A  + 
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           DEM +  +  D  T   L+    +     EAE  F + + RG+  D  S+S +I    R 
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
             LD A       +  G VP    Y  +I    R G   EAL+++DEM++    ++V   
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
            +++ G C    +  A  LF+E++E GV P+   F+ LI    K GN+ KA  L+  M  
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKC 390

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             ++P +   N L+ GF K   +E A  L    +   I+ + ++Y I++   C +G V E
Sbjct: 391 MGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNE 449

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  LW +M+GKGI P+LVS N +I G+C+ G    A E ++ ++  G+ P++I+Y  L+ 
Sbjct: 450 ACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILME 509

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  ++ + + AF +  +M   G+VP   T+N I+ G C+ GR+ ++   L   I++   P
Sbjct: 510 GSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIP 569

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              TY  +I+G+V +  +  A   + EM +    P+
Sbjct: 570 TSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPN 605



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 247/513 (48%), Gaps = 36/513 (7%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           + +KI  A      M + GV P     N L+ A  R   +E+A +L + M+ + +    +
Sbjct: 164 RANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCY 223

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T   L+    K G+   A+    +    GL  D A+Y+ ++   CR  ++  A ++    
Sbjct: 224 TLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGD 283

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV-LYTIIINGYCRNGF 185
              G  P   +++ +IG   R G    AL    EM  +  VP NV + T +I GYC  G 
Sbjct: 284 EELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSR-VPVNVAVATSLIKGYCVRGD 342

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V  AL++ DE++E G   +V  ++ ++    +   + +A++L+  M   G+ P  +    
Sbjct: 343 VNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNF 402

Query: 246 LIHGH----------------------------------CKDGNMNKALNLFDIMTQKSI 271
           L+ G                                   C+ G +N+A NL+D M  K I
Sbjct: 403 LLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGI 462

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P +V+YN +I G CK G M+ A+++   +I   + PN I+Y IL+ G    G    AF 
Sbjct: 463 TPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFN 522

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           ++ +MV  GI PT  + N+II G C+ G  S+A + L+  + +   P S++YN +I+G+V
Sbjct: 523 MFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYV 582

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +E  +D A ++  +M    + P+VITY  ++ GFC+  +M  +  +   M  KGL  D +
Sbjct: 583 KEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDIT 642

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            Y TLI G     +++ A +F  ++L+ G  P+
Sbjct: 643 VYATLIAGFCKMQDMENACKFFSKLLEVGLTPN 675



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 194/354 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   CK   +D A   +  + + G+ P+ +TY  L+    ++G  E AF + + M   G
Sbjct: 472 MILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAG 531

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +T+NS+INGLCK GR   A++ L+  ++    P + TYN ++    ++  +  AE
Sbjct: 532 IVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAE 591

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM R  ++P+++++++LI  F ++ ++D AL    +MK  GL  D  +Y  +I G+
Sbjct: 592 SVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGF 651

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A K   ++LE G   + + YN +++       +  A +L  EM+   +  D 
Sbjct: 652 CKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDL 711

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+LI G  K+G ++ AL+L+  M  + I PDI  YN LI+G C  G++E A K+  +
Sbjct: 712 KIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKE 771

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
           M    I+P  + Y  LI G+   G++ EAFRL  EM+ KG+ P   + + ++ G
Sbjct: 772 MDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 96/214 (44%)

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D   +N L+  + +  ++ +A + +  M+   + P      +L+        V +A RL+
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EM  + I     +   +++   + G   +A+ +  +    G+  D+ SY+ +I    R 
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            ++D A  LV   E  G VP   TY  ++    R G   ++  +   M++  +  + +  
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           T+LI G+  + ++  A R  DE+++ G  P+ A 
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAI 364


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  274 bits (700), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 262/485 (54%), Gaps = 5/485 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K +K +       +M+  G+  D  TY+  IN +CR   L  A  ++  M   G
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T +SL+NG C   R   A  ++D+M++MG  PDT T+ TL+         SEA 
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +RG  PD+V++ T++    + G +D AL    +M++A +  + V++  II+  
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V  A+ +  EM  KG   +VVTYN+++N LC     ++A  L + MLE+ + P+ 
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI    K+G + +A  L + M Q+SI PD +TYN LI+GFC    +++A +++  
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+   PN  +Y  LING+C    V +   L+ EM  +G+    V+  TII+G+ ++GD
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +MVS  V  D ++Y+ L++G      +D A  +   ++   +  ++  YN 
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508

Query: 421 ILTGFCRQGRMHDSELILWRMI-EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++ G C+ G++ ++    W +     + PD  TY T+I+G  S+  L+EA     +M + 
Sbjct: 509 MIEGMCKAGKVGEA----WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564

Query: 480 GFVPD 484
           G +P+
Sbjct: 565 GTLPN 569



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 138/436 (31%), Positives = 235/436 (53%), Gaps = 4/436 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L   +K   A   + +M Q+G  PD VTY T++N  C+ G ++ A  L+N M    
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V  +N++I+ LCK    + A ++  EM   G+ P+  TYN+L+   C     S+A 
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  + + P++V+F+ LI  F + G+L  A     EM    + PD + Y ++ING+
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA +M   M+ K C+ ++ TYNT++NG C+ K + +  +LF EM +RG+  + 
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TT+I G  + G+ + A  +F  M    +  DI+TY+ L+ G C  G+++ A  ++  
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   ++  N   Y  +I G C  G V EA+ L+  +    IKP +V+ NT+I G C    
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL 550

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +AD+   KM  +G  P+S +YNTLI   +R+ +   +  L+ +M + G V D  T ++
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL 610

Query: 421 ILTGFCRQGRMHDSEL 436
           + T     GR+  S L
Sbjct: 611 V-TNMLHDGRLDKSFL 625



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 242/458 (52%), Gaps = 3/458 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I  A   + +M + G  PDT T+ TLI+         EA  L++ M  +G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TY +++NGLCK+G  D A  +L++M    +  +   +NT++   C+  ++  A 
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  +G+ P++V++++LI      G+   A      M    + P+ V +  +I+ +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G ++EA K+ +EM+++    D +TYN ++NG C    L EA  +F  M+ +   P+ 
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI+G CK   +   + LF  M+Q+ +  + VTY T+I GF + G+ + A  ++  
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S ++  + ++Y IL++G CS G +  A  ++  +    ++  +   NT+I+G C++G 
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    +    + PD ++YNT+I+G   +  + +A  L  KM+  G +P+  TYN 
Sbjct: 519 VGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++    R      S  ++  M   G   D ST + + N
Sbjct: 576 LIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 222/415 (53%), Gaps = 1/415 (0%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L N L    + D A ++  +M++    P    +N LL    +         +  +M   G
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           ++ D+ ++S  I  F R  QL  AL    +M   G  PD V  + ++NGYC +  + +A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            + D+M+E G   D  T+ T+++GL      +EA  L ++M++RG  PD  T+ T+++G 
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK G+++ ALNL + M    IK ++V +NT+ID  CK   +E A  L+ +M ++ I PN 
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LIN  C+ G  ++A RL   M+ K I P +V+ N +I  + + G   +A++   +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+   +DPD+I+YN LINGF     +D+A  +   M ++  +P++ TYN ++ GFC+  R
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           + D   +   M ++GL  +  TYTT+I G     +   A     +M+    VP D
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR-VPTD 467



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 86/170 (50%)

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
           IL N    +  V +A  L+ +MV     P++V  N ++    +            +M + 
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+  D  +Y+  IN F R   +  A A+++KM   G  PD++T + +L G+C   R+ D+
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++ +M+E G  PD  T+TTLI+G    N   EA    D+M+QRG  PD
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 147/405 (36%), Positives = 233/405 (57%), Gaps = 3/405 (0%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N L++A  +E        +   M  + + P + T+N++INGLCK G+ ++A +V+D+M  
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258

Query: 94  MGLSPDTATYNTLLVESC---RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
            G  P+  TYNTL+   C   R   M +A+ I  EM    V+P+ V+F+ LI  F ++  
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDEN 318

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           L  AL  F EM+S GL P  V Y  ++NG C  G + EA  + DEML      +V+TYN 
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++NG C+ K+L EA +LF+ + ++G+ P+  TF TL+HG+CK G M +A  L  +M +K 
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKG 438

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
             P+  TYN LI GFC+ G+ME+   L  +M  R +  + ++Y ILI+ +C      +A 
Sbjct: 439 FLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAA 498

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           RL  EM+ KG+KP+ ++ N ++ GYC  G+   A     +M  EG   + ++YN LI G+
Sbjct: 499 RLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGY 558

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
            R+  ++ A  L+++M  +GL+P+  TY +I      +G + D E
Sbjct: 559 CRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIE 603



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 243/403 (60%), Gaps = 8/403 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL K+++    +    EM ++ + P+ +T+NT+IN  C+ G L +A  +++ M   G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260

Query: 61  LKPGVFTYNSLINGLCKKGRCD---RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             P V TYN+LI+G CK GR     +A  +L EM++  +SP++ T+N L+   C+ EN+S
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A ++F EM  +G+ P +V++++L+      G+L+ A +   EM S+ L P+ + Y  +I
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NGYC+   + EA ++ D + ++G   +V+T+NT+L+G C+   + EA  L   MLE+G  
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL 440

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  LI G C++G M +  NL + M  + +K D VTYN LI  +C+  E +KA +L
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M+ + + P++++Y IL+NGYC  G++  A  L  +M  +G    +V+ N +I+GYCR
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
            G    A+  L++M+ +G+ P+  +Y       ++EE M+K F
Sbjct: 561 KGKLEDANGLLNEMLEKGLIPNRTTYE-----IIKEEMMEKGF 598



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 141/426 (33%), Positives = 249/426 (58%), Gaps = 19/426 (4%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           K  V + N L++ L K+      + V  EM++  +SP+  T+NT++   C+   +++A +
Sbjct: 192 KLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGD 251

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIF---SRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           +  +M   G  P++V+++TLI  +    R G++ +A    +EM    + P++V + ++I+
Sbjct: 252 VVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G+C++  +  ALK+ +EM  +G    VVTYN+++NGLC    L EA  L +EML   + P
Sbjct: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  T+  LI+G+CK   + +A  LFD + ++ + P+++T+NTL+ G+CK G+ME+A  L 
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQ 431

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+ +   PN  +Y  LI G+C  G + E   L  EM  +G+K   V+ N +I  +C  
Sbjct: 432 KVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEK 491

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
            +  KA   + +M+ +G+ P  ++YN L+NG+  E N+  A  L  +ME +G   +V+TY
Sbjct: 492 KEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTY 551

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           NV++ G+CR+G++ D+  +L  M+EKGL P+R+TY  +                 +EM++
Sbjct: 552 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII----------------KEEMME 595

Query: 479 RGFVPD 484
           +GF+PD
Sbjct: 596 KGFLPD 601



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 16/205 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  K++ A +    M +KG  P+  TYN LI  +CREG +EE   L+N M  +G
Sbjct: 414 LLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRG 473

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K    TYN LI+  C+K    +A  ++DEML  GL P   TYN LL   C + N+  A 
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAAL 533

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M + G   ++V+++ LI  + R G+L+ A     EM   GL+P+   Y II    
Sbjct: 534 NLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII---- 589

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDV 205
                       ++EM+EKG + D+
Sbjct: 590 ------------KEEMMEKGFLPDI 602


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 152/491 (30%), Positives = 246/491 (50%), Gaps = 34/491 (6%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  VTYNTL+    + G + +A  L+  M   GL P V T+NS+++GLCK+ R   A  V
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
               L+ G  P+  TY+TL+    +   M EA ++  +M   G   + V++ST++    +
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 590

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+++ A++  R+M+ AG +PD V Y  +I+G+ +   + EA+ +  EMLE G    VVT
Sbjct: 591 VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 650

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T+ +GLCR+    EA ++ + M  RG  P+  T+++++ G CK G + +AL  F+ M 
Sbjct: 651 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 710

Query: 268 Q-KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
           + + + P ++ Y+ LIDG CK G +++A +    MI     P+ +++ ILING C  G +
Sbjct: 711 RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP-------- 378
                L+  M  +G K  + + N +I  YC  G+ S A   L +M + G+          
Sbjct: 771 DTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIV 830

Query: 379 -------------------------DSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
                                    D ISYNTLI   V     ++A  L+  M   G  P
Sbjct: 831 IKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSP 890

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D   Y  ++ G  + G    +  +L  M  +G +PD  TYT +I+G      L  A  + 
Sbjct: 891 DACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYF 950

Query: 474 DEMLQRGFVPD 484
           +EML++   PD
Sbjct: 951 EEMLRKNLKPD 961



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 258/507 (50%), Gaps = 25/507 (4%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREG---FLEEAFQLMNSM 56
           ++  LC   +++ A +++   +  +G+ P+  TY  L+   C+ G    LE+ F+ M   
Sbjct: 387 LIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLER 446

Query: 57  SGKG------------------LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSP 98
             +                    +P + TYN+L+ GL K G    A  +L+ M++ GLSP
Sbjct: 447 EWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSP 506

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
           D  T+N++L   C+++ + +A  +F     RG  P++V++STLI   S+  ++D AL   
Sbjct: 507 DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLL 566

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
            +M   G   + V Y+ +++G  + G + +A+ +  +M + GC+ D VTYNT+++G  + 
Sbjct: 567 AKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 626

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
           + L EA  L  EMLE G  P   T+TTL HG C+ G  ++A+ + D M  +   P+ +TY
Sbjct: 627 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITY 686

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           ++++DG CK G + +A   +  M   + ++P+ I+Y  LI+G C  G + EA+     M+
Sbjct: 687 SSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMI 746

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
             G  P +V+ + +I G C +G      E    M   G   D  +YN +IN +  +    
Sbjct: 747 RAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFS 806

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            A+AL+ +M+  G+  + +T+ +++   C   R+ D  +  +  I +    D  +Y TLI
Sbjct: 807 AAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRI-DEAVSYFHSIPEDCR-DEISYNTLI 864

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              V+    ++A      M+  G  PD
Sbjct: 865 TSLVASRRSEQALELLRAMVADGGSPD 891



 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 233/451 (51%), Gaps = 8/451 (1%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           VTYN LIN  C+ G + +AF         G +P V TY+++I+GLC+    D+  ++L+E
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M   G +P+  TYNTL+     +    EA  +   M+  G  P++++F  +I    + G+
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           ++ A     EM   G VPD  ++T++++  C  G V EA     ++L  G   D VTYNT
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +++GL +A  L  A  +   + E    P  +TFT  + G  K GN+  A   FD M Q  
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           + P+ VTY+ LIDG CK G+++ A  L  D  S+       ++  L++G C    + EA 
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA---GMFAFSSLLHGLCQAHRLEEAI 298

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           +L   M      P +V  N+++ G C++    +A E    M   G   D I+YN L+ G 
Sbjct: 299 QLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGL 355

Query: 391 VREENMDKAFALVSKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE-KGLNP 448
            +   + +A+  V  M   +G  P+V+T++ ++ G C  GR++ +  +  RM+  +G++P
Sbjct: 356 CKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISP 415

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +R TY  L+ G     + +   +  ++ML+R
Sbjct: 416 NRFTYAFLLEGLCKAGDSRRLEQCFEQMLER 446



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 269/568 (47%), Gaps = 89/568 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  ++  A     +  Q G  P  VTY+T+I+  CR+  +++  +L+  M+G+G
Sbjct: 7   LINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG 66

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN+L+N L  +GR   A  +L+ M   G  P+  T+  ++   C++  +  A 
Sbjct: 67  CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAF 126

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  RG  PD+   + L+      G++D A  +F+++   G  PD V Y  +++G 
Sbjct: 127 RVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGL 186

Query: 181 CRNGFVLEALKMRDEML-EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            + G  LEA  M  ++L E      V T+   ++GL +A  LT A + F+ M + GV P+
Sbjct: 187 YKAGR-LEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPN 245

Query: 240 FYTFTTLIHGHCKDGNMNKALNLF-----------------------------DIMTQKS 270
             T+  LI G CK G ++ AL L                               ++    
Sbjct: 246 TVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP 305

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLW---------ADMISRKI--------------- 306
             P++V +N+L++G C+   +++A +L+         AD+I+  I               
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY 365

Query: 307 ------------SPNYISYGILINGYCSMGHVTEAFRLWYEMVG-KGIKPTLVSCNTIIK 353
                       SPN +++  LI G C+ G V +A+ ++  MV  +GI P   +   +++
Sbjct: 366 RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLE 425

Query: 354 GYCRSGDASKADEFLSKMV-------------SEGVD--------PDSISYNTLINGFVR 392
           G C++GD+ + ++   +M+             S  VD        P  ++YNTL+ G  +
Sbjct: 426 GLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSK 485

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              +  A  L+  M   GL PDVIT+N +L G C++ R+ D+  +  R +E+G  P+  T
Sbjct: 486 SGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVT 545

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           Y+TLI+G      + EA +   +M++ G
Sbjct: 546 YSTLIDGLSKMAKMDEALQLLAKMVELG 573



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 246/477 (51%), Gaps = 6/477 (1%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V+ L K  +++ A + L +M   G  PD VTYNTLI+ + +   L EA  L+  M   G
Sbjct: 584  VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 643

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P V TY +L +GLC+ GR D A E+LD M   G +P+  TY++++   C+   ++EA 
Sbjct: 644  FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 703

Query: 121  EIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
              F +M+R   VAP ++++S LI    + G++D A  +   M  AG +PD V ++I+ING
Sbjct: 704  GYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILING 763

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             C  G +   L++   M E+GC  D+  YN ++N  C     + A  L  EM   G+  +
Sbjct: 764  LCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKN 823

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              T   +I   C +  +++A++ F  + +     D ++YNTLI         E+A +L  
Sbjct: 824  TVTHGIVIKALCGNDRIDEAVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQALELLR 881

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             M++   SP+  +Y  +++G    G    A +L  EM  +G  P L +   +I G  ++ 
Sbjct: 882  AMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAK 941

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
                A ++  +M+ + + PD+I Y++LI+ F + + +D A+ L   + + G+ P +  Y+
Sbjct: 942  QLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYS 998

Query: 420  VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
             ++   C+      +  ++  M  K   P    +T+L   +V++  + EA +  +++
Sbjct: 999  TMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 207/408 (50%), Gaps = 6/408 (1%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-GK 59
            + + LC+  + D A   L  M  +G  P+ +TY+++++  C+ G + EA      M+  +
Sbjct: 654  LCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 713

Query: 60   GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             + P V  Y++LI+GLCK GR D A E L+ M++ G  PD  T++ L+   C    +   
Sbjct: 714  VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTG 773

Query: 120  EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             E+FC M+ RG   DI +++ +I  +   G+   A     EMK+ G+  + V + I+I  
Sbjct: 774  LELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKA 833

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             C N  + EA+     + E     D ++YNT++  L  ++   +A +L   M+  G  PD
Sbjct: 834  LCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPD 891

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
               + T++ G  K G+   A  L   M  +   PD+ TY  +I G  K  ++  A   + 
Sbjct: 892  ACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFE 951

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +M+ + + P+ I Y  LI+ +C    V +A++L   +   GI+PT+   +T++   C++ 
Sbjct: 952  EMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNR 1008

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
               KA E + +M S+  +P    + +L   +V E  +D+A  LV+ ++
Sbjct: 1009 GTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 193/420 (45%), Gaps = 74/420 (17%)

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           +V+++ LI    + G++  A   FR+    G  P  V Y+ +I+G CR+  V +  K+ +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 195 EMLEKGCVMDVVTYNTILN-----------------------------------GLCRAK 219
           EM  +GC  + VTYNT++N                                   GLC+  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            +  A  + +EM++RG  PD    T L+H  C+ G +++A   F  +      PD VTYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           T++DG  K G +E A  +   +     SP   ++ I ++G    G++T A+  +  M   
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 340 GIKPTLVSCNTIIKGYCRSG-----------------------------DASKADEFLSK 370
           G+ P  V+ + +I G C++G                              A + +E +  
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQL 300

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           + +    P+ + +N+L+NG  +   +D+AF L   M+  G   DVITYN++L G C+  R
Sbjct: 301 LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRR 360

Query: 431 MHDSELILWRMIE-----KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ-RGFVPD 484
           + ++    +R +E     +G +P+  T++TLI G  +   + +A+  ++ M+   G  P+
Sbjct: 361 IPEA----YRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/420 (33%), Positives = 223/420 (53%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           T++YN L+    + G  +  +   N M G G  P  +TY  L+  LC+  R + A+ V  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
            M   G SP+  +Y+ L+   CR + + EA E+  EM   G  P++V++ +L+    + G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           +L  A+  F  M   G  PD V+Y ++I+G+ + G + EA ++ +EMLEKGC+  V TYN
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           ++L+G  R         LF +ML +G  P+ +TF  L+ G CK G+M +A  LF  M   
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
              PD+V+YNTL+ G C  G+  +A +L  +MI   + P+ +SY ILI+GY   G +  A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            +L+YE+   G++P   S +TII   CR+G    A      M++ G  PD+     L+ G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             R E + ++  L   M     VP +  YN+++   C+  R  D   I   + E+G +PD
Sbjct: 377 LCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 139/421 (33%), Positives = 220/421 (52%)

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
           G  +YN L+  L K GRCD      ++ML  G  P+T TY  LL   C+ +   EA  +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
             M+ +G +P++ S+S LI    R  ++D A     EM   G  P+ V Y  +++G C+ 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + EA+ +   M+ +GC  D V YN +++G  +   + EA  LF EMLE+G  P  +T+
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +L+ G  + G   +  +LF  M ++   P+I T+N L+DGFCK+G+M +A++L+ +M S
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
               P+ +SY  L+ G CS G   EA RL  EM+  G+ P +VS N +I GY +SG    
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A +   ++   G++PD+ SY+T+I+   R   +  AF +   M   G  PD      ++ 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G CR  R+ +S  +   M++    P    Y  L+          +      E+ +RGF P
Sbjct: 376 GLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435

Query: 484 D 484
           D
Sbjct: 436 D 436



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 211/422 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K  + D       +M   G  P+T TY  L+ + C+    EEA  +   M+ +G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VF+Y+ LI GLC+  + D A E+L+EM+  G  P+  TY +LL   C+   + EA 
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M  RG  PD V ++ LI  FS+ G +  A   F EM   G +P    Y  +++G+
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G       +  +ML +GCV ++ T+N +L+G C+   + EA  LF EM   G  PD 
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TL+ G C  G  ++A  L   M +  + PDIV+YN LIDG+ K G ++ A KL+ +
Sbjct: 263 VSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+  SY  +I+  C  G V  AF ++ +M+  G  P       ++ G CR   
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +++ E    MV     P    YN L+    + +  D    +  ++  +G  PDV    V
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKV 442

Query: 421 IL 422
           IL
Sbjct: 443 IL 444



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 210/399 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+  + + A+     M  +G  P+  +Y+ LI   CR   ++EA +L+N M   G
Sbjct: 58  LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY SL++GLCK G+   A ++   M+  G  PD   YN L+    +K +M EA 
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G  P + ++++L+  FSR G+  R    F++M   G VP+   +  +++G+
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA ++  EM   GC  DVV+YNT++ G+C      EA  L  EM+  GV PD 
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDI 297

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LI G+ K G ++ A+ LF  + +  ++PD  +Y+T+ID  C+ G++  A  ++ D
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKD 357

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI+   +P+      L+ G C    +TE+  L+  MV     P +   N ++   C++  
Sbjct: 358 MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKR 417

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           +    E   ++   G  PD      ++    R ++ + A
Sbjct: 418 SDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAA 456



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 193/351 (54%)

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           +S++ L+ + +++G+ D     + +M  AG VP+   Y  ++   C+     EA  +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M  +GC  +V +Y+ ++ GLCR + + EA +L NEM++ G  P+  T+ +L+ G CK G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           + +A++LF  M  +   PD V YN LIDGF K G+M +A +L+ +M+ +   P   +Y  
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           L++G+   G       L+ +M+ +G  P + + N ++ G+C+ GD  +A     +M S G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             PD +SYNTL+ G   +    +A  L+ +M   G+ PD+++YN+++ G+ + G +  + 
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            + + + + GL PD  +Y+T+I+       +  AF    +M+  G  PD A
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA 368



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 183/365 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  K+D A   L EM   G  P+ VTY +L++  C+ G L+EA  L + M  +G
Sbjct: 93  LIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG 152

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    YN LI+G  KKG    A  + +EML+ G  P   TYN+LL    RK      +
Sbjct: 153 CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQ 212

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M R+G  P+I +F+ L+  F + G +  A   F EM+S G  PD V Y  ++ G 
Sbjct: 213 SLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGM 272

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EA ++  EM+  G   D+V+YN +++G  ++  L  A  LF E+ + G+ PD 
Sbjct: 273 CSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDA 332

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++++T+I   C+ G +  A  +F  M      PD      L+ G C+   + ++ +L+  
Sbjct: 333 FSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQA 392

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+  +  P    Y +L+   C      +   +++E+  +G  P +     I++   RS D
Sbjct: 393 MVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDD 452

Query: 361 ASKAD 365
              A+
Sbjct: 453 KEAAE 457


>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
 gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
          Length = 829

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 154/475 (32%), Positives = 269/475 (56%), Gaps = 4/475 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG-LKPGVFTYNS 70
           D A     EME  GV P   +++ +IN  C++  + EA   +     +G  KP   T+N 
Sbjct: 218 DVALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNI 277

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++ LC  G    AK  L  ML+ GL PD  T++TL+   C+  +M EA ++F  +++ G
Sbjct: 278 LMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEG 337

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +  +IV++++LI  +   G         + M+  G+ PD V YTI+I G+C +G V E +
Sbjct: 338 MELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGM 397

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+R ++L++G  +++VTY+ +LN L +  M  E D+L  E+   G+  D   ++ LIHG+
Sbjct: 398 KVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGY 457

Query: 251 CKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP- 308
           CK G + KAL + + M + + + P  + + +++ G CK G + +A + + + ++RK  P 
Sbjct: 458 CKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEA-RWYLENVARKYQPT 516

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + + Y ++I+GY  +G +  A RL+ ++   G+ PT+V+CN+++ GYC+ GD   A+ + 
Sbjct: 517 DVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYF 576

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             +   G+ P +++Y TL++       ++   +L  +M  + +  + +TY+VI+ G C+Q
Sbjct: 577 RAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQ 636

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            R  ++  +L  M  KG+N D  TY TLI G     N++ AF  HD ML RG VP
Sbjct: 637 LRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVP 691



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 150/482 (31%), Positives = 257/482 (53%), Gaps = 1/482 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC    + SAK FLC M + G+ PD  T++TLI+  C+ G +EEA  L   ++ +G
Sbjct: 278 LMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEG 337

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  + TYNSLING    G      +++  M   G+ PD  TY  L+   C   ++ E  
Sbjct: 338 MELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGM 397

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  ++  +G+  +IV++S L+    + G          E+ + GL  D + Y+I+I+GY
Sbjct: 398 KVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGY 457

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDV-VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G + +AL++ + M     VM   + + +IL GLC+  +L EA      +  +    D
Sbjct: 458 CKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTD 517

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I G+ K G++  A+ L+D +T   + P IVT N+L+ G+CK+G+++ A   + 
Sbjct: 518 VVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFR 577

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    + P  ++Y  L++     G V     L+ EMV K IK   V+ + I+KG C+  
Sbjct: 578 AIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQL 637

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   L  M S+G++ D I+YNTLI GF   EN+  AF +   M  +GLVP  +TYN
Sbjct: 638 RFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYN 697

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++   C +G++  +E++L  + E G+   +  YTTLI    ++     A     ++L  
Sbjct: 698 LLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDA 757

Query: 480 GF 481
           GF
Sbjct: 758 GF 759



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 209/384 (54%), Gaps = 5/384 (1%)

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
            ++ L     R + + +A  +  +MS   +   + ++ +L+         D AL  F EM
Sbjct: 171 VWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMT---DVALELFEEM 227

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV-VTYNTILNGLCRAKM 220
           +S G+ P    ++IIING C+   V EAL    E  ++G    + +T+N +++ LC    
Sbjct: 228 ESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGF 287

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           +  A      ML+ G+ PD YTF+TLIHG CK G+M +AL+LF+ +T++ ++ +IVTYN+
Sbjct: 288 VQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNS 347

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           LI+G+  +G  ++  K+   M  + + P+ ++Y ILI G+C  G V E  ++  +++ +G
Sbjct: 348 LINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQG 407

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           ++  +V+ + ++    + G   + D  L ++ + G+D D I+Y+ LI+G+ +   ++KA 
Sbjct: 408 LQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKAL 467

Query: 401 ALVSKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            + + M  +Q ++P  + +  IL G C++G + ++   L  +  K    D   Y  +I+G
Sbjct: 468 QVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDG 527

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVP 483
           +    ++  A R +D++   G  P
Sbjct: 528 YAKLGDIVNAVRLYDQITVAGMHP 551



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 196/387 (50%), Gaps = 1/387 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++NAL K          L E+   G+  D + Y+ LI+ YC+ G +E+A Q+ N+M S +
Sbjct: 418 LLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQ 477

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P    + S++ GLCKKG    A+  L+ + +     D   YN ++    +  ++  A
Sbjct: 478 RVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNA 537

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ +++  G+ P IV+ ++L+  + + G L  A  YFR ++ +GL+P  V YT +++ 
Sbjct: 538 VRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDA 597

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
               G V   L + DEM+ K    + VTY+ I+ GLC+     EA ++  +M  +G+  D
Sbjct: 598 LSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINAD 657

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G C+  N+  A ++ DIM  + + P  VTYN LI+  C  G++ +A  L  
Sbjct: 658 PITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLE 717

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    I     +Y  LI   C+ G    A  L  +++  G + ++   +  I   C+  
Sbjct: 718 SLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQ 777

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTL 386
            A +A  F+  M+S G+ PD+  Y  L
Sbjct: 778 FAKEAFMFVPIMLSVGIYPDTQIYCVL 804



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 165/320 (51%), Gaps = 9/320 (2%)

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
           FRE  S G V D      + N Y R   V +AL +  +M      + V TY+++L+GL  
Sbjct: 162 FRECDSNGCVWDA-----LANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGL-- 214

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN-LFDIMTQKSIKPDIV 276
            +M   A +LF EM   GV P  Y+ + +I+G CK   + +AL+ L +   +   KP  +
Sbjct: 215 -RMTDVALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGM 273

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           T+N L+   C  G ++ A      M+   + P+  ++  LI+G C +G + EA  L+  +
Sbjct: 274 TFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERV 333

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
             +G++  +V+ N++I GY   G   +  + +  M  +GV+PD ++Y  LI G     ++
Sbjct: 334 TKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDV 393

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           ++   +   + +QGL  +++TY+V+L    ++G   + + +L  +   GL+ D   Y+ L
Sbjct: 394 EEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSIL 453

Query: 457 INGHVSQNNLKEAFRFHDEM 476
           I+G+     +++A +  + M
Sbjct: 454 IHGYCKLGEIEKALQVCNAM 473



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 10/252 (3%)

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI--VTYNTLIDGFCKVGEMEK 293
           VFP+  +     H H K+ +   A  L DI+  +  + D     ++ L + + +   +  
Sbjct: 132 VFPEALSID---HYHIKNRS-GSAAALCDILWNRFRECDSNGCVWDALANSYARAQMVHD 187

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  + + M S  +  +  +Y  L++G   +     A  L+ EM   G+ P+  S + II 
Sbjct: 188 ALYVLSKMSSLNMQISVFTYDSLLHG---LRMTDVALELFEEMESCGVSPSEYSHSIIIN 244

Query: 354 GYCRSGDASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
           G C+     +A  FL +   EG   P  +++N L++       +  A + +  M   GLV
Sbjct: 245 GLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSAKSFLCLMLKYGLV 304

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           PD  T++ ++ G C+ G M ++  +  R+ ++G+  +  TY +LING+      KE  + 
Sbjct: 305 PDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKI 364

Query: 473 HDEMLQRGFVPD 484
              M  +G  PD
Sbjct: 365 IQMMRGQGVEPD 376



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+   +  A      M  +G+ P  VTYN LIN  C +G + +A  L+ S+   G
Sbjct: 664 LIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENG 723

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K   F Y +LI   C KG    A  ++ ++L  G       ++  +   C+++   EA 
Sbjct: 724 IKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAKEAF 783

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
                M   G+ PD   +  L     +N +L
Sbjct: 784 MFVPIMLSVGIYPDTQIYCVLGRALQKNSEL 814


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 154/486 (31%), Positives = 256/486 (52%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC++ +   A   L EM +  + PD  +YNT+I  +C    LE+A +L N M G G
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               + T+  LI+  CK G+ D A   L EM  MGL  D   Y +L+   C    +   +
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E+  RG +P  ++++TLI  F + GQL  A   F  M   G+ P+   YT +I+G 
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EAL++ + M+EK    + VTYN I+N LC+  ++ +A ++   M +R   PD 
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKS--IKPDIVTYNTLIDGFCKVGEMEKANKLW 298
            T+  L+ G C  G++++A  L  +M + S    PD+++YN LI G CK   + +A  ++
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             ++ +  + + ++  IL+N     G V +A  LW ++    I     +   +I G+C++
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  + A   L KM    + P    YN L++   +E ++D+A+ L  +M+     PDV+++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N+++ G  + G +  +E +L  M   GL+PD  TY+ LIN  +    L EA  F D+M+ 
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627

Query: 479 RGFVPD 484
            GF PD
Sbjct: 628 SGFEPD 633



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 252/486 (51%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  +++ A     EM+  G     VT+  LI+A+C+ G ++EA   +  M   G
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  +  Y SLI G C  G  DR K + DE+L+ G SP   TYNTL+   C+   + EA 
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF  M  RGV P++ +++ LI      G+   AL     M      P+ V Y IIIN  
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF--P 238
           C++G V +A+++ + M ++    D +TYN +L GLC    L EA  L   ML+   +  P
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  ++  LIHG CK+  +++AL+++D++ +K    D VT N L++   K G++ KA +LW
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             +   KI  N  +Y  +I+G+C  G +  A  L  +M    ++P++   N ++   C+ 
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A     +M  +   PD +S+N +I+G ++  ++  A +L+  M   GL PD+ TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++  F + G + ++     +M++ G  PD     +++   +SQ    +      +++ 
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662

Query: 479 RGFVPD 484
           +  V D
Sbjct: 663 KDIVLD 668



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 195/378 (51%), Gaps = 2/378 (0%)

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           N L+ +  R  N   A   + +M       + VS S L+  + +  +   A      M  
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
            G   +   + I++ G CRN    +A+ +  EM     + DV +YNT++ G C  K L +
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A +L NEM   G      T+  LI   CK G M++A+     M    ++ D+V Y +LI 
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           GFC  GE+++   L+ +++ R  SP  I+Y  LI G+C +G + EA  ++  M+ +G++P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            + +   +I G C  G   +A + L+ M+ +  +P++++YN +IN   ++  +  A  +V
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG--LNPDRSTYTTLINGHV 461
             M+ +   PD ITYN++L G C +G + ++  +L+ M++     +PD  +Y  LI+G  
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435

Query: 462 SQNNLKEAFRFHDEMLQR 479
            +N L +A   +D ++++
Sbjct: 436 KENRLHQALDIYDLLVEK 453



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 173/342 (50%), Gaps = 9/342 (2%)

Query: 148 NGQLDRALMYFREMKSAG----LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
           N QL  A+  F++   +G       +N++  ++ +   RN  +  A     +MLE    +
Sbjct: 51  NPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRS---RNHEL--AFSFYRKMLETDTFI 105

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           + V+ + +L    + +    A  +   ML+RG   + Y    L+ G C++    KA++L 
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M + S+ PD+ +YNT+I GFC+  E+EKA +L  +M     S + +++GILI+ +C  
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G + EA     EM   G++  LV   ++I+G+C  G+  +      +++  G  P +I+Y
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           NTLI GF +   + +A  +   M  +G+ P+V TY  ++ G C  G+  ++  +L  MIE
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           K   P+  TY  +IN       + +A    + M +R   PD+
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387


>gi|10140738|gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 811

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 154/475 (32%), Positives = 269/475 (56%), Gaps = 4/475 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG-LKPGVFTYNS 70
           D A     EME  GV P   +++ +IN  C++  + EA   +     +G  KP   T+N 
Sbjct: 200 DVALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNI 259

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++ LC  G    AK  L  ML+ GL PD  T++TL+   C+  +M EA ++F  +++ G
Sbjct: 260 LMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEG 319

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +  +IV++++LI  +   G         + M+  G+ PD V YTI+I G+C +G V E +
Sbjct: 320 MELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGM 379

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+R ++L++G  +++VTY+ +LN L +  M  E D+L  E+   G+  D   ++ LIHG+
Sbjct: 380 KVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGY 439

Query: 251 CKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP- 308
           CK G + KAL + + M + + + P  + + +++ G CK G + +A + + + ++RK  P 
Sbjct: 440 CKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEA-RWYLENVARKYQPT 498

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + + Y ++I+GY  +G +  A RL+ ++   G+ PT+V+CN+++ GYC+ GD   A+ + 
Sbjct: 499 DVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYF 558

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             +   G+ P +++Y TL++       ++   +L  +M  + +  + +TY+VI+ G C+Q
Sbjct: 559 RAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQ 618

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            R  ++  +L  M  KG+N D  TY TLI G     N++ AF  HD ML RG VP
Sbjct: 619 LRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVP 673



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/482 (31%), Positives = 257/482 (53%), Gaps = 1/482 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC    + SAK FLC M + G+ PD  T++TLI+  C+ G +EEA  L   ++ +G
Sbjct: 260 LMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEG 319

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  + TYNSLING    G      +++  M   G+ PD  TY  L+   C   ++ E  
Sbjct: 320 MELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGM 379

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  ++  +G+  +IV++S L+    + G          E+ + GL  D + Y+I+I+GY
Sbjct: 380 KVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGY 439

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDV-VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G + +AL++ + M     VM   + + +IL GLC+  +L EA      +  +    D
Sbjct: 440 CKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTD 499

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I G+ K G++  A+ L+D +T   + P IVT N+L+ G+CK+G+++ A   + 
Sbjct: 500 VVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFR 559

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    + P  ++Y  L++     G V     L+ EMV K IK   V+ + I+KG C+  
Sbjct: 560 AIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQL 619

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   L  M S+G++ D I+YNTLI GF   EN+  AF +   M  +GLVP  +TYN
Sbjct: 620 RFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYN 679

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++   C +G++  +E++L  + E G+   +  YTTLI    ++     A     ++L  
Sbjct: 680 LLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDA 739

Query: 480 GF 481
           GF
Sbjct: 740 GF 741



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 209/384 (54%), Gaps = 5/384 (1%)

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
            ++ L     R + + +A  +  +MS   +   + ++ +L+         D AL  F EM
Sbjct: 153 VWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMT---DVALELFEEM 209

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV-VTYNTILNGLCRAKM 220
           +S G+ P    ++IIING C+   V EAL    E  ++G    + +T+N +++ LC    
Sbjct: 210 ESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGF 269

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           +  A      ML+ G+ PD YTF+TLIHG CK G+M +AL+LF+ +T++ ++ +IVTYN+
Sbjct: 270 VQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNS 329

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           LI+G+  +G  ++  K+   M  + + P+ ++Y ILI G+C  G V E  ++  +++ +G
Sbjct: 330 LINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQG 389

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           ++  +V+ + ++    + G   + D  L ++ + G+D D I+Y+ LI+G+ +   ++KA 
Sbjct: 390 LQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKAL 449

Query: 401 ALVSKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            + + M  +Q ++P  + +  IL G C++G + ++   L  +  K    D   Y  +I+G
Sbjct: 450 QVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDG 509

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVP 483
           +    ++  A R +D++   G  P
Sbjct: 510 YAKLGDIVNAVRLYDQITVAGMHP 533



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 196/387 (50%), Gaps = 1/387 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++NAL K          L E+   G+  D + Y+ LI+ YC+ G +E+A Q+ N+M S +
Sbjct: 400 LLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQ 459

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P    + S++ GLCKKG    A+  L+ + +     D   YN ++    +  ++  A
Sbjct: 460 RVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNA 519

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ +++  G+ P IV+ ++L+  + + G L  A  YFR ++ +GL+P  V YT +++ 
Sbjct: 520 VRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDA 579

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
               G V   L + DEM+ K    + VTY+ I+ GLC+     EA ++  +M  +G+  D
Sbjct: 580 LSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINAD 639

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G C+  N+  A ++ DIM  + + P  VTYN LI+  C  G++ +A  L  
Sbjct: 640 PITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLE 699

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    I     +Y  LI   C+ G    A  L  +++  G + ++   +  I   C+  
Sbjct: 700 SLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQ 759

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTL 386
            A +A  F+  M+S G+ PD+  Y  L
Sbjct: 760 FAKEAFMFVPIMLSVGIYPDTQIYCVL 786



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 175/358 (48%), Gaps = 9/358 (2%)

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+  E   R +   +    T  G  S     D     FRE  S G V D      + N 
Sbjct: 106 HELLRERRWRAMRAALAQLVTEQGSGSAAALCDILWNRFRECDSNGCVWDA-----LANS 160

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y R   V +AL +  +M      + V TY+++L+GL   +M   A +LF EM   GV P 
Sbjct: 161 YARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGL---RMTDVALELFEEMESCGVSPS 217

Query: 240 FYTFTTLIHGHCKDGNMNKALN-LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
            Y+ + +I+G CK   + +AL+ L +   +   KP  +T+N L+   C  G ++ A    
Sbjct: 218 EYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSAKSFL 277

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+   + P+  ++  LI+G C +G + EA  L+  +  +G++  +V+ N++I GY   
Sbjct: 278 CLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLL 337

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +  + +  M  +GV+PD ++Y  LI G     ++++   +   + +QGL  +++TY
Sbjct: 338 GLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTY 397

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +V+L    ++G   + + +L  +   GL+ D   Y+ LI+G+     +++A +  + M
Sbjct: 398 SVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAM 455



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 4/209 (1%)

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            ++ L + + +   +  A  + + M S  +  +  +Y  L++G   +     A  L+ EM
Sbjct: 153 VWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHG---LRMTDVALELFEEM 209

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG-VDPDSISYNTLINGFVREEN 395
              G+ P+  S + II G C+     +A  FL +   EG   P  +++N L++       
Sbjct: 210 ESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGF 269

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +  A + +  M   GLVPD  T++ ++ G C+ G M ++  +  R+ ++G+  +  TY +
Sbjct: 270 VQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNS 329

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           LING+      KE  +    M  +G  PD
Sbjct: 330 LINGYRLLGLTKEIPKIIQMMRGQGVEPD 358



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+   +  A      M  +G+ P  VTYN LIN  C +G + +A  L+ S+   G
Sbjct: 646 LIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENG 705

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K   F Y +LI   C KG    A  ++ ++L  G       ++  +   C+++   EA 
Sbjct: 706 IKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAKEAF 765

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
                M   G+ PD   +  L     +N +L
Sbjct: 766 MFVPIMLSVGIYPDTQIYCVLGRALQKNSEL 796



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           SG A+   + L     E  D +   ++ L N + R + +  A  ++SKM +  +   V T
Sbjct: 130 SGSAAALCDILWNRFRE-CDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVFT 188

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           Y+ +L G     RM D  L L+  +E  G++P   +++ +ING   Q+ + EA  F  E 
Sbjct: 189 YDSLLHGL----RMTDVALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEA 244

Query: 477 LQRG-FVP 483
            + G F P
Sbjct: 245 RKEGKFKP 252


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 268/491 (54%), Gaps = 11/491 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+  L +M + G  P+++TYN+LI+ Y   G   E+ ++   MS  G
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 183

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL------VESCRKE 114
           + P V   NS I+ L K GR + AK + D M+  G  PD  +Y+T+L       +SC   
Sbjct: 184 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC--- 240

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            +++   IF  M  +G+AP+   F+ LI  ++R G +D+A++ F +M++ G++PD V + 
Sbjct: 241 -LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 299

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I+  CR G + +AL   + M++ G       Y  ++ G C    L +A +L +EM+ +
Sbjct: 300 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 359

Query: 235 GVFPD-FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            + P     F+++I+  CK+G + +  ++ D+M Q   +P++VT+N+L++G+C VG ME+
Sbjct: 360 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 419

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L   M S  I PN   YG L++GYC  G + +A  ++ +M+ KG+KPT V  + I+ 
Sbjct: 420 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 479

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G  ++   + A +   +M+  G      +Y  ++ G  R    D+A  L+ K+    +  
Sbjct: 480 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF 539

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D+IT+N++++   + GR  +++ +   +   GL P+  TY+ +I   + + + +EA    
Sbjct: 540 DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 599

Query: 474 DEMLQRGFVPD 484
             + + G   D
Sbjct: 600 ISVEKSGHASD 610



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 250/491 (50%), Gaps = 39/491 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   TYN LI+ Y R    +    ++  +   GL P  F+Y SLI G  K G  D+A  +
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 70

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             EM++ G+ P     N+++ E C+ + M +AE I  +M   G+APD+ ++S +I    +
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK---------------- 191
           +  +D+A     +M  AG  P+++ Y  +I+GY  +G   E+++                
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 192 -------------------MRDEMLEKGCVMDVVTYNTILNGLCRA--KMLTEADDLFNE 230
                              + D M+ KG   D+++Y+T+L+G   A    L +  ++FN 
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           ML +G+ P+ + F  LI+ + + G M+KA+ +F+ M  K + PD VT+ T+I   C++G 
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS-CN 349
           ++ A   +  M+   + P+   YG LI G C+ G + +A  L  EM+ K I P  V   +
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +II   C+ G  ++  + +  MV  G  P+ +++N+L+ G+    NM++AFAL+  M + 
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 430

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+ P+   Y  ++ G+C+ GR+ D+  +   M+ KG+ P    Y+ +++G         A
Sbjct: 431 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490

Query: 470 FRFHDEMLQRG 480
            +   EM++ G
Sbjct: 491 KKMFHEMIESG 501



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 208/394 (52%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +   +D A +   +M+ KG+ PDTVT+ T+I++ CR G L++A    N M   G
Sbjct: 266 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 325

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES-CRKENMSEA 119
           + P    Y  LI G C  G   +AKE++ EM+   + P    Y + ++ + C++  ++E 
Sbjct: 326 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 385

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++I   M + G  P++V+F++L+  +   G ++ A      M S G+ P+  +Y  +++G
Sbjct: 386 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 445

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+NG + +AL +  +ML KG     V Y+ IL+GL +A+  T A  +F+EM+E G    
Sbjct: 446 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 505

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+  ++ G C++   ++A  L + +   ++K DI+T+N +I    KVG  ++A +L+ 
Sbjct: 506 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 565

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +Y ++I          EA  L+  +   G        N I++      
Sbjct: 566 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 625

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           + +KA  +LS +    +  ++ + + L + F RE
Sbjct: 626 EVAKASNYLSIIGENNLTLEASTISLLASLFSRE 659



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 193/411 (46%), Gaps = 1/411 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  KG+ P+   +N LINAY R G +++A  +   M  KG+ P   T+ ++I+ LC+ GR
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS-FS 139
            D A    + M+ +G+ P  A Y  L+   C    + +A+E+  EM  + + P  V  FS
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           ++I    + G++         M   G  P+ V +  ++ GYC  G + EA  + D M   
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 430

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   +   Y T+++G C+   + +A  +F +ML +GV P    ++ ++HG  +      A
Sbjct: 431 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +F  M +      I TY  ++ G C+    ++AN L   + +  +  + I++ I+I+ 
Sbjct: 491 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 550

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
              +G   EA  L+  +   G+ P + + + +I    +     +AD     +   G   D
Sbjct: 551 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 610

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           S   N ++   + +  + KA   +S +    L  +  T +++ + F R+G+
Sbjct: 611 SRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 661



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 162/348 (46%), Gaps = 38/348 (10%)

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           Y I+I+ Y R       L +   +L+ G   D  +Y+ I  G  +   + +A  LF EM+
Sbjct: 17  YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHCLFLEMM 75

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
           E+GV P      ++I   CK   M+KA ++   M    I PD+ TY+ +IDG CK   M+
Sbjct: 76  EQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMD 135

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           KA ++   M+     PN I+Y  LI+GY   G   E+ R++ +M   G+ PT+ +CN+ I
Sbjct: 136 KAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFI 195

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNT--------------------------- 385
               + G  ++A      MV +G  PD ISY+T                           
Sbjct: 196 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 255

Query: 386 ----------LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
                     LIN + R   MDKA  +   M+N+G++PD +T+  +++  CR GR+ D+ 
Sbjct: 256 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 315

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
                M++ G+ P  + Y  LI G  +   L +A     EM+ +   P
Sbjct: 316 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 363



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 150/297 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ ++   K  +  M Q G  P+ VT+N+L+  YC  G +EEAF L+++M+  G
Sbjct: 372 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 431

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  + Y +L++G CK GR D A  V  +ML  G+ P +  Y+ +L    +    + A+
Sbjct: 432 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 491

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM   G    I ++  ++G   RN   D A M   ++ +  +  D + + I+I+  
Sbjct: 492 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 551

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA ++ D +   G V ++ TY+ ++  L + +   EAD+LF  + + G   D 
Sbjct: 552 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 611

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
                ++        + KA N   I+ + ++  +  T + L   F + G+  +  KL
Sbjct: 612 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKL 668


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 268/491 (54%), Gaps = 11/491 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+  L +M + G  P+++TYN+LI+ Y   G   E+ ++   MS  G
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 269

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL------VESCRKE 114
           + P V   NS I+ L K GR + AK + D M+  G  PD  +Y+T+L       +SC   
Sbjct: 270 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC--- 326

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            +++   IF  M  +G+AP+   F+ LI  ++R G +D+A++ F +M++ G++PD V + 
Sbjct: 327 -LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 385

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I+  CR G + +AL   + M++ G       Y  ++ G C    L +A +L +EM+ +
Sbjct: 386 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 445

Query: 235 GVFPD-FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            + P     F+++I+  CK+G + +  ++ D+M Q   +P++VT+N+L++G+C VG ME+
Sbjct: 446 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 505

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L   M S  I PN   YG L++GYC  G + +A  ++ +M+ KG+KPT V  + I+ 
Sbjct: 506 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 565

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G  ++   + A +   +M+  G      +Y  ++ G  R    D+A  L+ K+    +  
Sbjct: 566 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF 625

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D+IT+N++++   + GR  +++ +   +   GL P+  TY+ +I   + + + +EA    
Sbjct: 626 DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 685

Query: 474 DEMLQRGFVPD 484
             + + G   D
Sbjct: 686 ISVEKSGHASD 696



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 250/491 (50%), Gaps = 39/491 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   TYN LI+ Y R    +    ++  +   GL P  F+Y SLI G  K G  D+A  +
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 156

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             EM++ G+ P     N+++ E C+ + M +AE I  +M   G+APD+ ++S +I    +
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK---------------- 191
           +  +D+A     +M  AG  P+++ Y  +I+GY  +G   E+++                
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 192 -------------------MRDEMLEKGCVMDVVTYNTILNGLCRA--KMLTEADDLFNE 230
                              + D M+ KG   D+++Y+T+L+G   A    L +  ++FN 
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           ML +G+ P+ + F  LI+ + + G M+KA+ +F+ M  K + PD VT+ T+I   C++G 
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS-CN 349
           ++ A   +  M+   + P+   YG LI G C+ G + +A  L  EM+ K I P  V   +
Sbjct: 397 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 456

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +II   C+ G  ++  + +  MV  G  P+ +++N+L+ G+    NM++AFAL+  M + 
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 516

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+ P+   Y  ++ G+C+ GR+ D+  +   M+ KG+ P    Y+ +++G         A
Sbjct: 517 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 576

Query: 470 FRFHDEMLQRG 480
            +   EM++ G
Sbjct: 577 KKMFHEMIESG 587



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 208/394 (52%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +   +D A +   +M+ KG+ PDTVT+ T+I++ CR G L++A    N M   G
Sbjct: 352 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 411

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES-CRKENMSEA 119
           + P    Y  LI G C  G   +AKE++ EM+   + P    Y + ++ + C++  ++E 
Sbjct: 412 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 471

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++I   M + G  P++V+F++L+  +   G ++ A      M S G+ P+  +Y  +++G
Sbjct: 472 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 531

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+NG + +AL +  +ML KG     V Y+ IL+GL +A+  T A  +F+EM+E G    
Sbjct: 532 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 591

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+  ++ G C++   ++A  L + +   ++K DI+T+N +I    KVG  ++A +L+ 
Sbjct: 592 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 651

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +Y ++I          EA  L+  +   G        N I++      
Sbjct: 652 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 711

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           + +KA  +LS +    +  ++ + + L + F RE
Sbjct: 712 EVAKASNYLSIIGENNLTLEASTISLLASLFSRE 745



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 162/348 (46%), Gaps = 38/348 (10%)

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           Y I+I+ Y R       L +   +L+ G   D  +Y+ I  G  +   + +A  LF EM+
Sbjct: 103 YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHCLFLEMM 161

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
           E+GV P      ++I   CK   M+KA ++   M    I PD+ TY+ +IDG CK   M+
Sbjct: 162 EQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMD 221

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           KA ++   M+     PN I+Y  LI+GY   G   E+ R++ +M   G+ PT+ +CN+ I
Sbjct: 222 KAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFI 281

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNT--------------------------- 385
               + G  ++A      MV +G  PD ISY+T                           
Sbjct: 282 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 341

Query: 386 ----------LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
                     LIN + R   MDKA  +   M+N+G++PD +T+  +++  CR GR+ D+ 
Sbjct: 342 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 401

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
                M++ G+ P  + Y  LI G  +   L +A     EM+ +   P
Sbjct: 402 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 449



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 146/289 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ ++   K  +  M Q G  P+ VT+N+L+  YC  G +EEAF L+++M+  G
Sbjct: 458 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  + Y +L++G CK GR D A  V  +ML  G+ P +  Y+ +L    +    + A+
Sbjct: 518 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 577

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM   G    I ++  ++G   RN   D A M   ++ +  +  D + + I+I+  
Sbjct: 578 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 637

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA ++ D +   G V ++ TY+ ++  L + +   EAD+LF  + + G   D 
Sbjct: 638 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 697

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                ++        + KA N   I+ + ++  +  T + L   F + G
Sbjct: 698 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 746


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/486 (30%), Positives = 258/486 (53%), Gaps = 3/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC    +D A      + ++GV PD VTY+TL++   +   L+ A  L++ M   G
Sbjct: 164 ILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYG 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           ++     YN+L++G  + G  ++A +V +++++  G SP+ ATY  +L   C+     EA
Sbjct: 224 VQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEA 283

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E++  M       D V++  LI    R+G +D A   + +M  AGLV D  +Y  +I G
Sbjct: 284 GEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKG 343

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-ERGVFP 238
           +C  G   EA K  D     G +  + TYN +  GL  + M++EA +L  ++  +    P
Sbjct: 344 FCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSP 402

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  TF TLIHG C++G  N+A  + +       + D+ +Y+++I+ FCK G    AN+++
Sbjct: 403 DKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVY 462

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M+     PN   Y  LING+C +  + +A +++ EM   G  PT+++ NT+I G C++
Sbjct: 463 KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKA 522

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               +A     +M+  G  PD  +Y +LI G  R++ +D A  +  ++ + GL  DV+ +
Sbjct: 523 EKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVH 582

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N+++ G C  G++ ++  I   M EK  +P+  TY TL++G     ++ +A      +L 
Sbjct: 583 NILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILD 642

Query: 479 RGFVPD 484
            G  PD
Sbjct: 643 NGLKPD 648



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 231/465 (49%), Gaps = 40/465 (8%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG----LSPDTATYNTLLVESCRKEN 115
           G  PGV ++N+L++   +  R   A      +        ++P+  TYN +L   C + +
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +  A  +F  + RRGVAPD V++STL+   +++ QLD AL    EM + G+  D V Y  
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233

Query: 176 IINGYCRNGFVLEALKMRDEML-EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           +++G  R G   +A+K+ ++++ + G   ++ TY  +L+GLC+     EA ++++ M+  
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
               D  T+  LIHG C+ G+++ A  ++  M +  +  D+  YN+LI GFC+VG   +A
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 295 NKLW-----------------------ADMISRKI------------SPNYISYGILING 319
            K W                       + M+S               SP+ +++G LI+G
Sbjct: 354 WKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHG 413

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G+   AF +  +    G +  + S +++I  +C+ G    A+E    MV +G  P+
Sbjct: 414 LCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPN 473

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           S  YN LINGF R   ++ A  +  +M + G  P +ITYN ++ G C+  +  ++  +  
Sbjct: 474 SHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTK 533

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M+E+G  PD  TY +LI G      +  A R  DE+L  G   D
Sbjct: 534 EMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVD 578



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 218/393 (55%), Gaps = 2/393 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+   +DSA     +M + G+  D   YN+LI  +C  G   EA++  +S    G
Sbjct: 305 LIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           ++  + TYN +  GL   G    A E+L ++      SPD  T+ TL+   C     + A
Sbjct: 365 IRQ-ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRA 423

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            EI  +    G   D+ S+S++I  F ++G+   A   ++ M   G  P++ +Y  +ING
Sbjct: 424 FEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALING 483

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR   + +A+K+  EM   GC   ++TYNT+++GLC+A+   EA  L  EMLERG  PD
Sbjct: 484 FCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPD 543

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ +LI G C+D  ++ AL ++D +    ++ D++ +N LI G C  G++++A  ++ 
Sbjct: 544 IRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYL 603

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  +  SPN ++Y  L++G+  +G + +A  LW  ++  G+KP +V+ NT IKG C   
Sbjct: 604 EMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCN 663

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
              +    L+++++ G+ P  I+++ L+   ++
Sbjct: 664 RTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 221/433 (51%), Gaps = 2/433 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  +   A      M       DTVTY  LI+  CR G ++ A ++ + M   G
Sbjct: 270 MLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAG 329

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   V  YNSLI G C+ GR   A +  D     G+   T TYN +         +SEA 
Sbjct: 330 LVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSEAT 388

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E+  ++      +PD V+F TLI     NG  +RA     + +++G   D   Y+ +IN 
Sbjct: 389 ELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINR 448

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C++G   +A ++   M++ GC  +   YN ++NG CR   + +A  ++ EM   G  P 
Sbjct: 449 FCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPT 508

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G CK     +A +L   M ++  KPDI TY +LI G C+  +++ A ++W 
Sbjct: 509 IITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWD 568

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +++   +  + + + ILI+G CS G V EAF ++ EM  K   P LV+ NT++ G+   G
Sbjct: 569 EILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIG 628

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              KA    + ++  G+ PD ++YNT I G        +   L++++   G++P VIT++
Sbjct: 629 SIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWS 688

Query: 420 VILTGFCRQGRMH 432
           +++    + G + 
Sbjct: 689 ILVRAVIKYGPIQ 701



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 161/348 (46%), Gaps = 8/348 (2%)

Query: 140 TLIGIFSRNGQLDRALMYFREMKSA-GLVPDNVLYTIIINGYCRNGFVLEA----LKMRD 194
            ++  FSR    D AL  FR++ S  G  P    +  +++ + R     +A      +  
Sbjct: 88  VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSH 147

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
               +    ++ TYN IL  LC    +  A  LF+ +  RGV PD  T++TL+ G  K  
Sbjct: 148 GAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISY 313
            ++ AL+L D M    ++ D V YN L+ G  + G  EKA K+W  ++     SPN  +Y
Sbjct: 208 QLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATY 267

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
            ++++G C +G   EA  +W  M+    +   V+   +I G CRSGD   A    S MV 
Sbjct: 268 KVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK 327

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+  D   YN+LI GF       +A+         G +  + TYN++  G    G + +
Sbjct: 328 AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSE 386

Query: 434 SELILWRMI-EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  +L ++  +   +PD+ T+ TLI+G         AF   ++    G
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSG 434


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 266/481 (55%), Gaps = 5/481 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK++++D A   L EM  KG  PD V+Y TLI++ C+ G ++EA +L  S +   
Sbjct: 187 LLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT--- 243

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  YN+LING+CK+   + A ++LDEM+  G+ P+  +Y T++       N+  + 
Sbjct: 244 --PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSL 301

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  RG +P++ +F++LI  F   G    AL ++  M   G+VP+ V Y  +++G 
Sbjct: 302 AVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGL 361

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + +A+ + ++M   GC  +V TY+ +++G  +A  L  A +++N M+  G  P+ 
Sbjct: 362 CSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNV 421

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T ++   C++   N+A  L + M  ++  P+ VT+NT I G C  G ++ A K++  
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQ 481

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +    PN  +Y  L++         EAF L  +M  +GI+  LV+ NTII GYC +G 
Sbjct: 482 MGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGM 541

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L KMV  G  PD+I+ N +I+ + ++  ++ A  L+ ++      PD+I Y  
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G C    + ++ + L RM+ +G++P+ +T+  L+    S      A +F D +L  G
Sbjct: 602 LISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSG 661

Query: 481 F 481
           F
Sbjct: 662 F 662



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 257/519 (49%), Gaps = 40/519 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L  + ++D  +  L +M+ +G+      + ++I +Y R G  E+A +    M    
Sbjct: 82  MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFR 141

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V  YN +++ L  + R      +   M + G+ P+  TYN LL   C+   +  A 
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS +G  PD VS++TLI    + G++  A    RE+ +    P   +Y  +ING 
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA----REL-AMSFTPSVPVYNALINGV 256

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+     EA ++ DEM+ KG   +V++Y TI+N L  A  +  +  +  +M  RG  P+ 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN--------------------- 279
           +TFT+LI G    G  ++AL+ +D M ++ + P++V YN                     
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 280 --------------TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                          LIDG+ K G+++ A+++W  MI+    PN ++Y  +++  C    
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +A+ L   M  +   P  V+ NT IKG C SG    A +   +M + G  P++ +YN 
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++  +++    +AF LV  ME++G+  +++TYN I+ G+C  G + ++  +L +M+ +G
Sbjct: 497 LLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRG 556

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             PD  T   +I+ +  Q  +  A +  D +    + PD
Sbjct: 557 TKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPD 595



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 199/412 (48%), Gaps = 35/412 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLE------------- 47
           ++N +CK++  + A   L EM  KG+ P+ ++Y T+INA    G +E             
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 48  ----------------------EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                                 EA    + M  +G+ P V  YN+L++GLC K     A 
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            V ++M   G  P+  TY+ L+    +  ++  A E++  M   G  P++V+++ ++ + 
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            RN   ++A      M+     P+ V +   I G C +G V  A+K+ D+M   GC  + 
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYN +L+ L + +   EA  L  +M  RG+  +  T+ T+I+G+C  G + +AL L   
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  +  KPD +T N +ID +CK G++  A +L   + + K  P+ I+Y  LI+G C+   
Sbjct: 552 MVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIG 611

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           V EA      M+ +GI P + + N +++    +   S A +FL  ++  G +
Sbjct: 612 VEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFE 663



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 205/455 (45%), Gaps = 30/455 (6%)

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
           + K  K    TY  +I  L  +   D  + +L +M   G+S     + +++    R  + 
Sbjct: 68  NSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSS 127

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A + F  M    V P +  ++ ++       +       +  MK  G+ P+   Y I+
Sbjct: 128 EQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNIL 187

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI------------------------- 211
           +   C+N  V  A K+  EM  KGC  D V+Y T+                         
Sbjct: 188 LKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVP 247

Query: 212 -----LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
                +NG+C+     EA  L +EM+ +G+ P+  ++TT+I+     GN+  +L +   M
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             +   P++ T+ +LI GF   G   +A   W  MI   + PN ++Y  L++G CS   +
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A  ++ +M   G  P + + + +I GY ++GD   A E  + M++ G  P+ ++Y  +
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           ++   R    ++A+ L+  M+ +   P+ +T+N  + G C  GR+  +  +  +M   G 
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            P+ +TY  L++  +      EAF    +M  RG 
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 172/349 (49%), Gaps = 5/349 (1%)

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           +++  +I   +   ++D      ++MK  G+     L+  +I  Y R G   +ALK    
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M +      V  YN IL+ L         + +++ M + G+ P+ +T+  L+   CK+  
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           ++ A  L   M+ K   PD V+Y TLI   CK+G++++A +L     +   +P+   Y  
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNA 251

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LING C      EAF+L  EM+ KGI P ++S  TII     +G+   +   L+KM + G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             P+  ++ +LI GF  +    +A     +M  +G+VP+V+ YN ++ G C +  + D+ 
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  +M   G  P+  TY+ LI+G+    +L  A    + M+  G  P+
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPN 420



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 259 ALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           AL  F  I   KS K   +TY  +I+      EM+    L   M    IS +   +  +I
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
             Y   G   +A + +Y M    +KPT+   N I+            +   S M  +G++
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+  +YN L+    +   +D A  L+ +M ++G  PD ++Y  +++  C+ G++ ++   
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--- 235

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             R +     P    Y  LING   +   +EAF+  DEM+ +G  P+
Sbjct: 236 --RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPN 280



 Score = 44.7 bits (104), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 60/147 (40%)

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           K  K T ++   +I+      +       L +M  EG+      + ++I  + R  + ++
Sbjct: 70  KSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQ 129

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A     +M++  + P V  YN IL     + R      I   M + G+ P+  TY  L+ 
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                N +  A +   EM  +G  PD+
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDE 216


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/494 (31%), Positives = 252/494 (51%), Gaps = 22/494 (4%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +  ++   K  L  M  +G YP    +N+LI+AYCR G    A++L+  M   G +PG  
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405

Query: 67  TYNSLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            YN LI G+C   +       + A++   EML   +  +    + L    C      +A 
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM  +G  PD  ++S +IG+     ++D A + F EMKS  +VPD   YTI+I+ +
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A K  DEM+  GC  +VVTY  +++   +A+ ++ A++LF  ML  G  P+ 
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD----------------IVTYNTLIDG 284
            T+T LI GHCK G + KA  ++  M   +  PD                I TY  L+DG
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CK  ++++A  L   M      PN+I Y  LI+G+C +G + EA  ++ +M  +G  P 
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + + +++I    +      A + LS+M+     P+ I Y  +I+G  +    D+A+ L+S
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            ME +G  P+V+TY  ++ GF + G++     ++ +M  KG  P+  TY  LIN   +  
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 465 NLKEAFRFHDEMLQ 478
            L +A +  DEM Q
Sbjct: 826 LLDDAHQLLDEMKQ 839



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 251/503 (49%), Gaps = 22/503 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +   LC   K + A   + EM  KG  PDT TY+ +I   C    ++ AF L   M    
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY  LI+  CK G   +A++  DEM++ G +P+  TY  L+    +   MS A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD----------- 169
           E+F  M   G  P++V+++ LI    ++GQ+++A   +  M+    +PD           
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 170 ----NVL-YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
               N+  Y  +++G C+   V EA  + D M  +GC  + + Y+ +++G C+   L EA
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +F +M ERG  P+ YT+++LI    KD  ++ AL +   M + S  P+++ Y  +IDG
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CKVG+ ++A +L + M  +   PN ++Y  +I+G+   G V +   L  +M  KG  P 
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
            V+   +I   C +G    A + L +M           Y  +I GF RE  +  +  L+ 
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLD 868

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN---PDRSTYTTLINGHV 461
           ++     VP +  Y +++  FC+ GR+ +  L L + +    +    D+  Y++LI    
Sbjct: 869 EIAENVAVPIIPAYRILIDSFCKAGRL-ELALELHKXMSSCTSYSAADKDLYSSLIESLS 927

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
             + + +AF  + +M++RG +P+
Sbjct: 928 LASKVDKAFELYADMIKRGGIPE 950



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 248/540 (45%), Gaps = 60/540 (11%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           V+ LCK  +   A   L  +E++    DTV Y  +I+  C     EEA   ++ M     
Sbjct: 274 VHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSC 330

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P V TY  L+ G  +K +  R K +L  M+  G  P    +N+L+   CR  + S A +
Sbjct: 331 IPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRN--------------------------------- 148
           +  +M   G  P  V ++ LIG    N                                 
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450

Query: 149 --------GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
                   G+ ++A    REM S G +PD   Y+ +I   C    V  A  + +EM    
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            V DV TY  +++  C+  +L +A   F+EM+  G  P+  T+T LIH + K   M+ A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM----------ISRKI---- 306
            LF++M  +   P++VTY  LIDG CK G++EKA +++A M          +  KI    
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 307 --SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              PN  +YG L++G C    V EA  L   M  +G +P  +  + +I G+C+ G   +A
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
               +KM   G  P+  +Y++LI+   +++ +D A  ++S+M      P+VI Y  ++ G
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C+ G+  ++  ++  M EKG +P+  TYT +I+G      + +      +M  +G  P+
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 243/538 (45%), Gaps = 54/538 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C++   + A   L  ++  G  P  +TYN L+  +     L+ A+ +   MS  G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 61  LKPGVFT--------------------------------YNSLINGLCKKGRCDRAKEVL 88
                +T                                Y  +I+GLC+    + A + L
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFL 322

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
             M      P+  TY  LL    RK  +   + I   M   G  P    F++LI  + R+
Sbjct: 323 SRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS 382

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF-----VLE-ALKMRDEMLEKGCV 202
           G    A    ++M   G  P  V+Y I+I G C N       VLE A K   EML+   V
Sbjct: 383 GDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV 442

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           ++ V  + +   LC A    +A  +  EM+ +G  PD  T++ +I   C    ++ A  L
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M    + PD+ TY  LID FCKVG +++A K + +M+    +PN ++Y  LI+ Y  
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM----------- 371
              ++ A  L+  M+ +G  P +V+   +I G+C+SG   KA +  ++M           
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622

Query: 372 ---VSEG--VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              + +G   DP+  +Y  L++G  +   + +A  L+  M  +G  P+ I Y+ ++ GFC
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G++ +++++  +M E+G  P+  TY++LI+       L  A +    ML+    P+
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 208/446 (46%), Gaps = 51/446 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K  K+ SA      M  +G  P+ VTY  LI+ +C+ G +E+A Q+   M G  
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 61  ----------------LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                             P +FTY +L++GLCK  +   A+++LD M   G  P+   Y+
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   + EA+ +F +MS RG  P++ ++S+LI    ++ +LD AL     M   
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ ++YT +I+G C+ G   EA ++   M EKGC  +VVTY  +++G  +A  + + 
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            +L  +M  +G  P+F T+  LI+  C  G ++ A  L D M Q      +  Y  +I+G
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEG 855

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           F +  E   +  L  ++      P   +Y ILI+ +C  G +  A  L   M        
Sbjct: 856 FNR--EFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXM-------- 905

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
             SC +           S AD+ L              Y++LI        +DKAF L +
Sbjct: 906 -SSCTSY----------SAADKDL--------------YSSLIESLSLASKVDKAFELYA 940

Query: 405 KMENQGLVPDVITYNVILTGFCRQGR 430
            M  +G +P++  +  ++ G  R  R
Sbjct: 941 DMIKRGGIPELSIFFYLVKGLIRINR 966



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 185/422 (43%), Gaps = 9/422 (2%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N LI   C+ G  + A E L  +  +G  P   TYN L+      + +  A  +  EMS 
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G   D  +    + +  + G+   AL    + +      D V+YT +I+G C      E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASLFEE 317

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A+     M    C+ +VVTY  +L G  R + L     + + M+  G +P    F +LIH
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC------KVGEMEKANKLWADMI 302
            +C+ G+ + A  L   M     +P  V YN LI G C       +  +E A K + +M+
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              +  N ++   L    C  G   +A+ +  EM+ KG  P   + + +I   C +    
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            A     +M S  V PD  +Y  LI+ F +   + +A     +M   G  P+V+TY  ++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
             + +  +M  +  +   M+ +G  P+  TYT LI+GH     +++A + +  M     +
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 483 PD 484
           PD
Sbjct: 618 PD 619



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 158/369 (42%), Gaps = 44/369 (11%)

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           + RE++         L  ++I   CRNG    AL+    + + G     +TYN ++    
Sbjct: 184 FLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
            A  L  A  +  EM + G   D YT    +H  CK G   +AL L +   ++  K D V
Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTV 300

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            Y  +I G C+    E+A    + M S    PN ++Y IL+ G      +    R+   M
Sbjct: 301 IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMM 360

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           + +G  P+    N++I  YCRSGD S A + L KM   G  P  + YN LI G    E +
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420

Query: 397 -----------------------------------------DKAFALVSKMENQGLVPDV 415
                                                    +KA++++ +M ++G +PD 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            TY+ ++   C   ++ ++ L+   M    + PD  TYT LI+       L++A ++ DE
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 476 MLQRGFVPD 484
           M++ G  P+
Sbjct: 541 MVRDGCAPN 549


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 144/451 (31%), Positives = 248/451 (54%), Gaps = 1/451 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  K   +D A +F  EM  KG+      +N+L+ +  R    E+A+   N +  + 
Sbjct: 99  IINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKER- 157

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+++  +I G C+ G  D++ ++L  +  MGLSP+   Y TL+   C+  ++  A 
Sbjct: 158 VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERAR 217

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M   G+  +  +F+ LI    + G        F +MK  GL P+   Y  ++N Y
Sbjct: 218 LFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEY 277

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A  + DEM E+G   +VVTYNT++ G+CR + + EA+ L ++M +  V P+ 
Sbjct: 278 CGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNL 337

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G C  GN++KA +L D +    + P +VTYN LI+G+ K G  +    L  +
Sbjct: 338 ITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLARE 397

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R ISP+ ++  +LI+ Y  +  + +AF+++  M   G+ P +     +I G C  G+
Sbjct: 398 MEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGN 457

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             ++ +    M    V+P  + YNT+I+G+ +E+N  +A  L+ +ME +GLVP+V +Y+ 
Sbjct: 458 MKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSS 517

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           I+   C+ G+  ++E++L +MIE  L P  S
Sbjct: 518 IIGVLCKDGKWEEAEVLLDKMIELQLKPSAS 548



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 143/419 (34%), Positives = 231/419 (55%), Gaps = 1/419 (0%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y S+IN   K    D+A    +EM+  GL      +N+LL    R     +A   F E+ 
Sbjct: 96  YESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELK 155

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
            R V  D+ SF  +I     NG LD++      ++  GL P+ V+YT +I+G C+NG + 
Sbjct: 156 ER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIE 214

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A    D+M E G V +  T+  ++NGL +  +  +  DLF +M   G+FP+ YT+  L+
Sbjct: 215 RARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLM 274

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           + +C +G + +A +LFD M ++ ++ ++VTYNTLI G C+   + +A KL   M    +S
Sbjct: 275 NEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVS 334

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN I+Y  LI G+C +G++ +A  L  ++   G+ P+LV+ N +I+GY ++G+     + 
Sbjct: 335 PNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADL 394

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M   G+ P  ++   LI+ +VR + M+KAF + S ME  GLVPDV  Y V++ G C 
Sbjct: 395 AREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCM 454

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +G M +S  +   M E  + P    Y T+I+G+  ++N   A R   EM  +G VP+ A
Sbjct: 455 KGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVA 513



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 228/421 (54%), Gaps = 1/421 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +L + +  + A +F  E++++ V  D  ++  +I   C  G L+++FQL+  +   G
Sbjct: 134 LLGSLVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMG 192

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V  Y +LI+G CK G  +RA+   D+M +MGL  +  T+  L+    +K    +  
Sbjct: 193 LSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGF 252

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M   G+ P++ +++ L+  +   G++ RA   F EM+  G+  + V Y  +I G 
Sbjct: 253 DLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGM 312

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   V EA K+ D+M +     +++TYNT++ G C    L +A  L +++   G+ P  
Sbjct: 313 CREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSL 372

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G+ K GN     +L   M  + I P  VT   LID + ++ EMEKA ++++ 
Sbjct: 373 VTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSS 432

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + P+   YG+LI+G C  G++ E+ +L+  M    ++P+ V  NT+I GYC+  +
Sbjct: 433 MEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDN 492

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + +A   L +M ++G+ P+  SY+++I    ++   ++A  L+ KM    L P     N+
Sbjct: 493 SYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNM 552

Query: 421 I 421
           I
Sbjct: 553 I 553



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 194/354 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+  I+ A++F  +M + G+  +  T+  LIN   ++G  ++ F L   M   G
Sbjct: 203 LIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKING 262

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P ++TYN L+N  C +G+  RA ++ DEM + G+  +  TYNTL+   CR+E + EAE
Sbjct: 263 LFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAE 322

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M +  V+P++++++TLIG F   G LD+A     ++KS GL P  V Y I+I GY
Sbjct: 323 KLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGY 382

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G       +  EM  +G     VT   +++   R + + +A  +++ M + G+ PD 
Sbjct: 383 SKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDV 442

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y +  LIHG C  GNM ++  LF  M +  ++P  V YNT+I G+CK     +A +L  +
Sbjct: 443 YVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLRE 502

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
           M ++ + PN  SY  +I   C  G   EA  L  +M+   +KP+    N I K 
Sbjct: 503 MEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 214/437 (48%), Gaps = 50/437 (11%)

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           +A  + +  +Q G      + + LL        +  A+ +  ++    ++    +  +L+
Sbjct: 20  QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLL 79

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
              ++N            M +A      +LY  IIN + ++  + +AL   +EM++KG V
Sbjct: 80  HHLTQNQN--------PSMTTA------LLYESIINAHLKSQLLDKALIFFNEMVDKGLV 125

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
                +N++L  L R+    +A   FNE+ ER  F D Y+F  +I G C++GN++K+  L
Sbjct: 126 FRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQL 184

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN--------------------------- 295
             ++    + P++V Y TLIDG CK G++E+A                            
Sbjct: 185 LGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFK 244

Query: 296 --------KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
                    L+  M    + PN  +Y  L+N YC  G +  AF L+ EM  +G++  +V+
Sbjct: 245 KGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVT 304

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            NT+I G CR     +A++ + +M    V P+ I+YNTLI GF    N+DKA +L+ +++
Sbjct: 305 YNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLK 364

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           + GL P ++TYN+++ G+ + G       +   M  +G++P + T T LI+ +V    ++
Sbjct: 365 SNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEME 424

Query: 468 EAFRFHDEMLQRGFVPD 484
           +AF+ +  M + G VPD
Sbjct: 425 KAFQIYSSMEKFGLVPD 441



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 154/321 (47%), Gaps = 26/321 (8%)

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
           L+AL + +  +++G      + + +L  L     L  A  L  ++L   +   F+T  +L
Sbjct: 19  LQALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSL 78

Query: 247 IH---------------------GHCKDGNMNKALNLFDIMTQKSI--KPDIVTYNTLID 283
           +H                      H K   ++KAL  F+ M  K +  +P+I  +N+L+ 
Sbjct: 79  LHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLG 136

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
              +    EKA  L+ + +  ++  +  S+GI+I G C  G++ ++F+L   +   G+ P
Sbjct: 137 SLVRSNCFEKA-WLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSP 195

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            +V   T+I G C++GD  +A  F  KM   G+  +  ++  LING  ++      F L 
Sbjct: 196 NVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLF 255

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            KM+  GL P++ TYN ++  +C +G++  +  +   M E+G+  +  TY TLI G   +
Sbjct: 256 EKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCRE 315

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
             + EA +  D+M +    P+
Sbjct: 316 ERVWEAEKLVDQMKKAAVSPN 336


>gi|297610666|ref|NP_001064867.2| Os10g0479200 [Oryza sativa Japonica Group]
 gi|255679497|dbj|BAF26781.2| Os10g0479200 [Oryza sativa Japonica Group]
          Length = 818

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 154/475 (32%), Positives = 269/475 (56%), Gaps = 4/475 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG-LKPGVFTYNS 70
           D A     EME  GV P   +++ +IN  C++  + EA   +     +G  KP   T+N 
Sbjct: 200 DVALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNI 259

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++ LC  G    AK  L  ML+ GL PD  T++TL+   C+  +M EA ++F  +++ G
Sbjct: 260 LMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEG 319

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +  +IV++++LI  +   G         + M+  G+ PD V YTI+I G+C +G V E +
Sbjct: 320 MELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGM 379

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+R ++L++G  +++VTY+ +LN L +  M  E D+L  E+   G+  D   ++ LIHG+
Sbjct: 380 KVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGY 439

Query: 251 CKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP- 308
           CK G + KAL + + M + + + P  + + +++ G CK G + +A + + + ++RK  P 
Sbjct: 440 CKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEA-RWYLENVARKYQPT 498

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + + Y ++I+GY  +G +  A RL+ ++   G+ PT+V+CN+++ GYC+ GD   A+ + 
Sbjct: 499 DVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYF 558

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             +   G+ P +++Y TL++       ++   +L  +M  + +  + +TY+VI+ G C+Q
Sbjct: 559 RAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQ 618

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            R  ++  +L  M  KG+N D  TY TLI G     N++ AF  HD ML RG VP
Sbjct: 619 LRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVP 673



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/482 (31%), Positives = 257/482 (53%), Gaps = 1/482 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC    + SAK FLC M + G+ PD  T++TLI+  C+ G +EEA  L   ++ +G
Sbjct: 260 LMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEG 319

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  + TYNSLING    G      +++  M   G+ PD  TY  L+   C   ++ E  
Sbjct: 320 MELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGM 379

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  ++  +G+  +IV++S L+    + G          E+ + GL  D + Y+I+I+GY
Sbjct: 380 KVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGY 439

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDV-VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G + +AL++ + M     VM   + + +IL GLC+  +L EA      +  +    D
Sbjct: 440 CKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTD 499

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I G+ K G++  A+ L+D +T   + P IVT N+L+ G+CK+G+++ A   + 
Sbjct: 500 VVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFR 559

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    + P  ++Y  L++     G V     L+ EMV K IK   V+ + I+KG C+  
Sbjct: 560 AIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQL 619

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   L  M S+G++ D I+YNTLI GF   EN+  AF +   M  +GLVP  +TYN
Sbjct: 620 RFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYN 679

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++   C +G++  +E++L  + E G+   +  YTTLI    ++     A     ++L  
Sbjct: 680 LLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDA 739

Query: 480 GF 481
           GF
Sbjct: 740 GF 741



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 209/384 (54%), Gaps = 5/384 (1%)

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
            ++ L     R + + +A  +  +MS   +   + ++ +L+         D AL  F EM
Sbjct: 153 VWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMT---DVALELFEEM 209

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV-VTYNTILNGLCRAKM 220
           +S G+ P    ++IIING C+   V EAL    E  ++G    + +T+N +++ LC    
Sbjct: 210 ESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGF 269

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           +  A      ML+ G+ PD YTF+TLIHG CK G+M +AL+LF+ +T++ ++ +IVTYN+
Sbjct: 270 VQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNS 329

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           LI+G+  +G  ++  K+   M  + + P+ ++Y ILI G+C  G V E  ++  +++ +G
Sbjct: 330 LINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQG 389

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           ++  +V+ + ++    + G   + D  L ++ + G+D D I+Y+ LI+G+ +   ++KA 
Sbjct: 390 LQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKAL 449

Query: 401 ALVSKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            + + M  +Q ++P  + +  IL G C++G + ++   L  +  K    D   Y  +I+G
Sbjct: 450 QVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDG 509

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVP 483
           +    ++  A R +D++   G  P
Sbjct: 510 YAKLGDIVNAVRLYDQITVAGMHP 533



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 196/387 (50%), Gaps = 1/387 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++NAL K          L E+   G+  D + Y+ LI+ YC+ G +E+A Q+ N+M S +
Sbjct: 400 LLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQ 459

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P    + S++ GLCKKG    A+  L+ + +     D   YN ++    +  ++  A
Sbjct: 460 RVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNA 519

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ +++  G+ P IV+ ++L+  + + G L  A  YFR ++ +GL+P  V YT +++ 
Sbjct: 520 VRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDA 579

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
               G V   L + DEM+ K    + VTY+ I+ GLC+     EA ++  +M  +G+  D
Sbjct: 580 LSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINAD 639

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G C+  N+  A ++ DIM  + + P  VTYN LI+  C  G++ +A  L  
Sbjct: 640 PITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLE 699

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    I     +Y  LI   C+ G    A  L  +++  G + ++   +  I   C+  
Sbjct: 700 SLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQ 759

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTL 386
            A +A  F+  M+S G+ PD+  Y  L
Sbjct: 760 FAKEAFMFVPIMLSVGIYPDTQIYCVL 786



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 175/358 (48%), Gaps = 9/358 (2%)

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+  E   R +   +    T  G  S     D     FRE  S G V D      + N 
Sbjct: 106 HELLRERRWRAMRAALAQLVTEQGSGSAAALCDILWNRFRECDSNGCVWDA-----LANS 160

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y R   V +AL +  +M      + V TY+++L+GL   +M   A +LF EM   GV P 
Sbjct: 161 YARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGL---RMTDVALELFEEMESCGVSPS 217

Query: 240 FYTFTTLIHGHCKDGNMNKALN-LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
            Y+ + +I+G CK   + +AL+ L +   +   KP  +T+N L+   C  G ++ A    
Sbjct: 218 EYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSAKSFL 277

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M+   + P+  ++  LI+G C +G + EA  L+  +  +G++  +V+ N++I GY   
Sbjct: 278 CLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLL 337

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +  + +  M  +GV+PD ++Y  LI G     ++++   +   + +QGL  +++TY
Sbjct: 338 GLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTY 397

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +V+L    ++G   + + +L  +   GL+ D   Y+ LI+G+     +++A +  + M
Sbjct: 398 SVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAM 455



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 4/209 (1%)

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            ++ L + + +   +  A  + + M S  +  +  +Y  L++G   +     A  L+ EM
Sbjct: 153 VWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHG---LRMTDVALELFEEM 209

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG-VDPDSISYNTLINGFVREEN 395
              G+ P+  S + II G C+     +A  FL +   EG   P  +++N L++       
Sbjct: 210 ESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGF 269

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +  A + +  M   GLVPD  T++ ++ G C+ G M ++  +  R+ ++G+  +  TY +
Sbjct: 270 VQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNS 329

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           LING+      KE  +    M  +G  PD
Sbjct: 330 LINGYRLLGLTKEIPKIIQMMRGQGVEPD 358



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 64/148 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+   +  A      M  +G+ P  VTYN LIN  C +G + +A  L+ S+   G
Sbjct: 646 LIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENG 705

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K   F Y +LI   C KG    A  ++ ++L  G       ++  +   C+++   EA 
Sbjct: 706 IKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAKEAF 765

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
                M   G+ PD   +  L     +N
Sbjct: 766 MFVPIMLSVGIYPDTQIYCVLGRALQKN 793



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           SG A+   + L     E  D +   ++ L N + R + +  A  ++SKM +  +   V T
Sbjct: 130 SGSAAALCDILWNRFRE-CDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVFT 188

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           Y+ +L G     RM D  L L+  +E  G++P   +++ +ING   Q+ + EA  F  E 
Sbjct: 189 YDSLLHGL----RMTDVALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEA 244

Query: 477 LQRG-FVP 483
            + G F P
Sbjct: 245 RKEGKFKP 252


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 259/479 (54%), Gaps = 1/479 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K  +  +A   L +ME+  +  D  TYN +I+  CR      AF L+  M    L P   
Sbjct: 201 KKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDEC 260

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TYN+LING   +G+ + A+ V + ML+  L P  ATY T++   CR   + +A  +  EM
Sbjct: 261 TYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEM 320

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              GV P  +++S L+  + +   L  AL    ++KS G+  +  + TI+I+G+C+ G +
Sbjct: 321 EITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEI 380

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A ++   MLE G   DVVTY+ ++NG+CR   + E  ++ + M + G+ P+   +TTL
Sbjct: 381 SKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 440

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I  +CK G +  AL  F  + ++ +  + V +N L+  F + G + +A      M    I
Sbjct: 441 ICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNI 500

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           S N +S+  +I+ YC  G + EAF ++ +MV  G  P + +   +++G C+ G   +A +
Sbjct: 501 SFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQ 560

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
           F+  ++      D  ++N L+ G  +   +D+A  +  KM     +PD+ TY ++L+GFC
Sbjct: 561 FMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFC 620

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA-FRFHDEMLQRGFVPD 484
           R+G++  + ++L  M+EKG+ PD   YT L+NG +++  +K A + F + + + G   D
Sbjct: 621 RKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYAD 679



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 268/592 (45%), Gaps = 106/592 (17%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++  C++ +ID A   L EME  GV P  +TY+ L+N YC+   L  A  LM  +  +G
Sbjct: 300 MIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRG 359

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +         LI+G C+ G   +AK++L  ML+ G+ PD  TY+ L+   CR   M E +
Sbjct: 360 ITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETK 419

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL-------- 172
           EI   M + G+ P+ V ++TLI  + + G +  AL +F ++   GLV + V+        
Sbjct: 420 EILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAF 479

Query: 173 ---------------------------YTIIINGYCRNGFVLEALKMRDEMLEKG----- 200
                                      +  II+ YC  G ++EA  + D+M+  G     
Sbjct: 480 YREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNV 539

Query: 201 ------------------------CVMDVV------TYNTILNGLCRAKMLTEADDLFNE 230
                                   C++D+       T+N +L G+C+   L EA D+  +
Sbjct: 540 CTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEK 599

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV-------------- 276
           M++    PD +T+T L+ G C+ G +  AL +  +M +K + PD V              
Sbjct: 600 MVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQ 659

Query: 277 ----------------------TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
                                  YN+L++G+ K G +    ++ +DM   ++ PN  SY 
Sbjct: 660 VKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYN 719

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
           IL++GY   G  +++  L+  MV KGI+P  V+   +I G    G    A +FL KMV E
Sbjct: 720 ILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLE 779

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+ PD + ++ LI  F  +  M  A  L + M+   L P   T++ ++ G  R+  +  S
Sbjct: 780 GIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQS 839

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +L  M++ GL P+ + Y  L+N       +  AFR  +EM   G VP + 
Sbjct: 840 HEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEV 891



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 243/484 (50%), Gaps = 1/484 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  LC+   +  AK F+  +       D  T+N L+   C+ G L+EA  +   M    
Sbjct: 545  LLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNN 604

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P + TY  L++G C+KG+   A  +L  ML+ G+ PDT  Y  LL     +  +  A 
Sbjct: 605  CLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 664

Query: 121  EIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F E+  + G+  D +++++L+  + + G ++       +M    + P++  Y I+++G
Sbjct: 665  YVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHG 724

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            Y + G   ++L +   M+ KG   D VTY  ++ GL    ++  A     +M+  G+FPD
Sbjct: 725  YVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 784

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
               F  LI    +   M+ AL LF+ M    + P   T++ +I+G  +   +++++++  
Sbjct: 785  KLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLH 844

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +M+   + PN+  Y  L+N  C +G +  AFRL  EM   GI P  V+ ++II+G CR G
Sbjct: 845  EMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCG 904

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               +A    S M+  G+ P   ++ TL++   +E  +  A  L   ME   L  DV++YN
Sbjct: 905  KLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYN 964

Query: 420  VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            V++TG C+   + D+  +   M  KGL P+ +TY TL     S   ++      +++ +R
Sbjct: 965  VLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEER 1024

Query: 480  GFVP 483
            G +P
Sbjct: 1025 GLIP 1028



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 246/484 (50%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL ++ +     +FL E   +    D  T N L+N+ C  G   +A  ++  M    
Sbjct: 126 ILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCC 185

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L     TYN++++   KKGR   A  VL++M +  +  D  TYN ++ + CR +  + A 
Sbjct: 186 LSNSA-TYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAF 244

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M +  + PD  +++TLI  F   G+++ A   F  M    LVP    YT +I+GY
Sbjct: 245 LLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGY 304

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CRN  + +AL +  EM   G +   +TY+ +LNG C+  ML  A DL  ++  RG+  + 
Sbjct: 305 CRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINK 364

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
              T LI G C+ G ++KA  +   M +  I PD+VTY+ LI+G C++ +M +  ++ + 
Sbjct: 365 TMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSR 424

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I PN + Y  LI  YC  G+V  A + + ++  +G+    V  N +++ + R G 
Sbjct: 425 MQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGM 484

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A+ F   M    +  +S+S+N +I+ +     + +AF++   M   G  P+V TY  
Sbjct: 485 ITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQN 544

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C+ G +  ++  ++ +++     D  T+  L+ G      L EA    ++M++  
Sbjct: 545 LLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNN 604

Query: 481 FVPD 484
            +PD
Sbjct: 605 CLPD 608



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 222/454 (48%), Gaps = 1/454 (0%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           V +  LI AY +E  + +A   +  M   G K      NS++  L ++G        L E
Sbjct: 86  VVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFLRE 145

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
            L      D  T N LL   C      +AE++  +M +     +  +++T++  + + G+
Sbjct: 146 SLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KSCCLSNSATYNTILHWYVKKGR 204

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
              AL    +M+   +  D   Y I+I+  CR      A  +   M +     D  TYNT
Sbjct: 205 FKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNT 264

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++NG      +  A  +FN ML + + P   T+TT+I G+C++  ++KAL++   M    
Sbjct: 265 LINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITG 324

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           + P  +TY+ L++G+CKV  +  A  L  D+ SR I+ N     ILI+G+C +G +++A 
Sbjct: 325 VMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAK 384

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           ++   M+  GI P +V+ + +I G CR     +  E LS+M   G+ P+ + Y TLI  +
Sbjct: 385 QILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYY 444

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +   +  A      +  +GLV + + +N +L  F R+G + ++E     M    ++ + 
Sbjct: 445 CKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNS 504

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++  +I+ +  +  + EAF  +D+M++ G  P+
Sbjct: 505 VSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPN 538



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 204/441 (46%), Gaps = 22/441 (4%)

Query: 49  AFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           A +++NS+  + GL    + Y   +  L +     +A  VL  +   G S  TA + +LL
Sbjct: 16  ALKILNSIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLAVTGFSC-TAIFTSLL 74

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ-LDRALMYFREMKSAGL 166
                             +  R  + + V F  LI  + +  + LD A+  F  M   G 
Sbjct: 75  -----------------RIISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFF-MDDCGF 116

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
               V    I+      G          E L +   +DV T N +LN LC      +A+D
Sbjct: 117 KASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAED 176

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           +  +M +     +  T+ T++H + K G    AL + + M + SI+ DI TYN +ID  C
Sbjct: 177 MLQKM-KSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLC 235

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           ++    +A  L   M    ++P+  +Y  LING+   G +  A  ++  M+ + + P++ 
Sbjct: 236 RIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVA 295

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           +  T+I GYCR+    KA   LS+M   GV P  ++Y+ L+NG+ +   +  A  L+  +
Sbjct: 296 TYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDL 355

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           +++G+  +     +++ GFC+ G +  ++ IL  M+E G++PD  TY+ LING      +
Sbjct: 356 KSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKM 415

Query: 467 KEAFRFHDEMLQRGFVPDDAF 487
            E       M + G +P+D  
Sbjct: 416 HETKEILSRMQKSGILPNDVL 436



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 162/345 (46%), Gaps = 35/345 (10%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++N   K   +++ K  + +M Q  VYP++ +YN L++ Y + G   ++  L   M  KG
Sbjct: 686  LMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG 745

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            ++P   TY  LI GL + G  D A + L++M+  G+ PD   ++ L+     K  M  A 
Sbjct: 746  IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNAL 805

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +F  M    ++P   +FS +I    R   LD++     EM   GL P++  Y  ++N  
Sbjct: 806  RLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAK 865

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            CR G +  A ++++EM   G V   V  ++I+ GLCR   L EA  +F+ M+  G+ P  
Sbjct: 866  CRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTV 925

Query: 241  YTFTTLIH-----------------------------------GHCKDGNMNKALNLFDI 265
             TFTTL+H                                   G CKD +++ AL+L+  
Sbjct: 926  ATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGE 985

Query: 266  MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
            M  K + P++ TY TL       G M+   +L  D+  R + P +
Sbjct: 986  MKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAF 1030


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 262/507 (51%), Gaps = 25/507 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++D A   L EM+++GV  D + ++TLI   CR+G ++EA +   SM G+ 
Sbjct: 5   VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEE 63

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEM-----LQMGLSPDTATYNTLLVESCRKEN 115
             P V TYN+++NGLCK  R D   E+ D+M        G  PD  +Y+T++   C+ + 
Sbjct: 64  CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 123

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + +A E F  M   G AP++V++S+LI    +  ++D A     ++K   +VP  + Y  
Sbjct: 124 VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNA 183

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           ++NG+ R G   E L++   M EKG  ++++ +N +L+ L +     +A   F  +L+ G
Sbjct: 184 VVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 243

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  T+   +HG CK G +++A  +   M +  + PD++TY+++IDGFCK G M+KA+
Sbjct: 244 KKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 303

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            ++  M+  +  P+ +++  L++G+       EAFR+  +MV  G  P L + N ++   
Sbjct: 304 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 363

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C +     A E   KM  +   PD+ +Y  LI    R   +D+A   +  ME   +VP+ 
Sbjct: 364 CGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNG 423

Query: 416 ITYNVILTGFCRQGRMHDSELIL-------------------WRMIEKGLNPDRSTYTTL 456
              + ++   C+QG + ++  +L                    +M+ KG+ PD +TY  +
Sbjct: 424 AICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAV 483

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +      + +  A    ++M  RG  P
Sbjct: 484 LRSLCGLDRVDSAIAEFEKMASRGCAP 510



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 235/488 (48%), Gaps = 21/488 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK-----GVYPDTVTYNTLINAYCREGFLEEAFQLMNS 55
           +VN LCK ++ID       +ME++     G  PD ++Y+T+I+A C+   +++A++    
Sbjct: 74  VVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKR 133

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M   G  P V TY+SLI+GLCK  R D A  +L ++    + P    YN ++    R+  
Sbjct: 134 MRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGK 193

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
            SE  E+   M  +G   +I+ F+ ++    +N + ++A  +F  +  +G  P+ V Y +
Sbjct: 194 PSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNV 253

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
            ++G C+ G V EA ++  EM+E     DV+TY++I++G C+A  + +ADD+F  M+   
Sbjct: 254 AVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHE 313

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P   TF TL+HG  +     +A  + + M      P + TYN L+D  C    +E A 
Sbjct: 314 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 373

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           +++  M  +K  P+  +Y  LI   C    V EA      M    + P    C+ +++  
Sbjct: 374 EIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVL 433

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+ G+  +A   L  +V                   +    D+A  ++ +M  +G+ PD 
Sbjct: 434 CKQGEVDEACSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKGVRPDE 477

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            TY  +L   C   R+  +     +M  +G  P   TYT LI    S +   +AFR  + 
Sbjct: 478 ATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEA 537

Query: 476 MLQRGFVP 483
           M+  GF P
Sbjct: 538 MVAAGFTP 545



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 222/425 (52%), Gaps = 6/425 (1%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y ++ING CK G+ D+A E+LDEM + G+  D   ++TL+   CRK  + EA E F  M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK-----SAGLVPDNVLYTIIINGYCR 182
               +P++++++T++    +  ++D  L  F +M+     S G  PD + Y+ +I+  C+
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
              V +A +    M   GC  +VVTY+++++GLC+   + EA  L  ++    + P    
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +  +++G  + G  ++ L L   M +K    +I+ +N ++    K  E EKA + +  ++
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
                PN ++Y + ++G C  G V EA+R+  EMV   + P +++ ++II G+C++G   
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           KAD+  ++M+     P  +++ TL++GF   +   +AF +   M N G +P + TYNV++
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLM 360

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
              C    +  +  I  +M  K   PD +TY  LI        + EA  F D M     V
Sbjct: 361 DCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVV 420

Query: 483 PDDAF 487
           P+ A 
Sbjct: 421 PNGAI 425



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 189/352 (53%), Gaps = 41/352 (11%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           +YT +ING+C+ G V +A ++ DEM E+G  MDV+ ++T++ GLCR   + EA + F  M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK-----SIKPDIVTYNTLIDGFC 286
            E    P+  T+ T+++G CK   +++ L LFD M ++       +PD+++Y+T+ID  C
Sbjct: 61  GEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K   ++KA + +  M +   +PN ++Y  LI+G C +  V EA+ L  ++ G+ + P  +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 347 SCNTIIKGYCRSGDAS-----------------------------------KADEFLSKM 371
             N ++ G+ R G  S                                   KA +F  ++
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           +  G  P+ ++YN  ++G  +   +D+A+ ++ +M    + PDVITY+ I+ GFC+ GRM
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             ++ +  RM+     P   T+ TL++G       +EAFR H++M+  GF+P
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIP 351



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEA----------- 49
           ++  LC+  ++D AK FL  ME   V P+    + L+   C++G ++EA           
Sbjct: 394 LIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEIC 453

Query: 50  --------FQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTA 101
                    +++  M  KG++P   TY +++  LC   R D A    ++M   G +P   
Sbjct: 454 KAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLV 513

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           TY  L+ E+C  +   +A  IF  M   G  P   +  TL       G  D
Sbjct: 514 TYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 268/491 (54%), Gaps = 11/491 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+  L +M + G  P+++TYN+LI+ Y   G   E+ ++   MS  G
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 345

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL------VESCRKE 114
           + P V   NS I+ L K GR + AK + D M+  G  PD  +Y+T+L       +SC   
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC--- 402

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            +++   IF  M  +G+AP+   F+ LI  ++R G +D+A++ F +M++ G++PD V + 
Sbjct: 403 -LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 461

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I+  CR G + +AL   + M++ G       Y  ++ G C    L +A +L +EM+ +
Sbjct: 462 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 521

Query: 235 GVFPD-FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            + P     F+++I+  CK+G + +  ++ D+M Q   +P++VT+N+L++G+C VG ME+
Sbjct: 522 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 581

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L   M S  I PN   YG L++GYC  G + +A  ++ +M+ KG+KPT V  + I+ 
Sbjct: 582 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 641

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G  ++   + A +   +M+  G      +Y  ++ G  R    D+A  L+ K+    +  
Sbjct: 642 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF 701

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D+IT+N++++   + GR  +++ +   +   GL P+  TY+ +I   + + + +EA    
Sbjct: 702 DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 761

Query: 474 DEMLQRGFVPD 484
             + + G   D
Sbjct: 762 ISVEKSGHASD 772



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 250/491 (50%), Gaps = 39/491 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   TYN LI+ Y R    +    ++  +   GL P  F+Y SLI G  K G  D+A  +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 232

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             EM++ G+ P     N+++ E C+ + M +AE I  +M   G+APD+ ++S +I    +
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK---------------- 191
           +  +D+A     +M  AG  P+++ Y  +I+GY  +G   E+++                
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 192 -------------------MRDEMLEKGCVMDVVTYNTILNGLCRA--KMLTEADDLFNE 230
                              + D M+ KG   D+++Y+T+L+G   A    L +  ++FN 
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           ML +G+ P+ + F  LI+ + + G M+KA+ +F+ M  K + PD VT+ T+I   C++G 
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 472

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS-CN 349
           ++ A   +  M+   + P+   YG LI G C+ G + +A  L  EM+ K I P  V   +
Sbjct: 473 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 532

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +II   C+ G  ++  + +  MV  G  P+ +++N+L+ G+    NM++AFAL+  M + 
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 592

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+ P+   Y  ++ G+C+ GR+ D+  +   M+ KG+ P    Y+ +++G         A
Sbjct: 593 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652

Query: 470 FRFHDEMLQRG 480
            +   EM++ G
Sbjct: 653 KKMFHEMIESG 663



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 208/394 (52%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +   +D A +   +M+ KG+ PDTVT+ T+I++ CR G L++A    N M   G
Sbjct: 428 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 487

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES-CRKENMSEA 119
           + P    Y  LI G C  G   +AKE++ EM+   + P    Y + ++ + C++  ++E 
Sbjct: 488 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 547

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++I   M + G  P++V+F++L+  +   G ++ A      M S G+ P+  +Y  +++G
Sbjct: 548 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 607

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+NG + +AL +  +ML KG     V Y+ IL+GL +A+  T A  +F+EM+E G    
Sbjct: 608 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 667

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+  ++ G C++   ++A  L + +   ++K DI+T+N +I    KVG  ++A +L+ 
Sbjct: 668 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 727

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +Y ++I          EA  L+  +   G        N I++      
Sbjct: 728 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 787

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           + +KA  +LS +    +  ++ + + L + F RE
Sbjct: 788 EVAKASNYLSIIGENNLTLEASTISLLASLFSRE 821



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 193/411 (46%), Gaps = 1/411 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  KG+ P+   +N LINAY R G +++A  +   M  KG+ P   T+ ++I+ LC+ GR
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 472

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS-FS 139
            D A    + M+ +G+ P  A Y  L+   C    + +A+E+  EM  + + P  V  FS
Sbjct: 473 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 532

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           ++I    + G++         M   G  P+ V +  ++ GYC  G + EA  + D M   
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 592

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   +   Y T+++G C+   + +A  +F +ML +GV P    ++ ++HG  +      A
Sbjct: 593 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +F  M +      I TY  ++ G C+    ++AN L   + +  +  + I++ I+I+ 
Sbjct: 653 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 712

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
              +G   EA  L+  +   G+ P + + + +I    +     +AD     +   G   D
Sbjct: 713 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 772

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           S   N ++   + +  + KA   +S +    L  +  T +++ + F R+G+
Sbjct: 773 SRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 823



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 176/406 (43%), Gaps = 77/406 (18%)

Query: 119 AEEIFCEMSR----RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           A E+F  M R    R   P I +++ LI  + R  + D  L     +   GL PD+  Y+
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           +I  G+ ++G V                                    +A  LF EM+E+
Sbjct: 216 LIY-GFVKDGEV-----------------------------------DKAHCLFLEMMEQ 239

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           GV P      ++I   CK   M+KA ++   M    I PD+ TY+ +IDG CK   M+KA
Sbjct: 240 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 299

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            ++   M+     PN I+Y  LI+GY   G   E+ R++ +M   G+ PT+ +CN+ I  
Sbjct: 300 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 359

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNT----------------------------- 385
             + G  ++A      MV +G  PD ISY+T                             
Sbjct: 360 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 419

Query: 386 --------LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
                   LIN + R   MDKA  +   M+N+G++PD +T+  +++  CR GR+ D+   
Sbjct: 420 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 479

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              M++ G+ P  + Y  LI G  +   L +A     EM+ +   P
Sbjct: 480 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 525



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 150/297 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ ++   K  +  M Q G  P+ VT+N+L+  YC  G +EEAF L+++M+  G
Sbjct: 534 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 593

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  + Y +L++G CK GR D A  V  +ML  G+ P +  Y+ +L    +    + A+
Sbjct: 594 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 653

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM   G    I ++  ++G   RN   D A M   ++ +  +  D + + I+I+  
Sbjct: 654 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 713

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA ++ D +   G V ++ TY+ ++  L + +   EAD+LF  + + G   D 
Sbjct: 714 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 773

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
                ++        + KA N   I+ + ++  +  T + L   F + G+  +  KL
Sbjct: 774 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKL 830


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/494 (31%), Positives = 252/494 (51%), Gaps = 22/494 (4%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +  ++   K  L  M  +G YP    +N+LI+AYCR G    A++L+  M   G +PG  
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405

Query: 67  TYNSLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            YN LI G+C   +       + A++   EML   +  +    + L    C      +A 
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM  +G  PD  ++S +IG+     ++D A + F EMKS  +VPD   YTI+I+ +
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A K  DEM+  GC  +VVTY  +++   +A+ ++ A++LF  ML  G  P+ 
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD----------------IVTYNTLIDG 284
            T+T LI GHCK G + KA  ++  M   +  PD                I TY  L+DG
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CK  ++++A  L   M      PN+I Y  LI+G+C +G + EA  ++ +M  +G  P 
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + + +++I    +      A + LS+M+     P+ I Y  +I+G  +    D+A+ L+S
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            ME +G  P+V+TY  ++ GF + G++     ++ +M  KG  P+  TY  LIN   +  
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 465 NLKEAFRFHDEMLQ 478
            L +A +  DEM Q
Sbjct: 826 LLDDAHQLLDEMKQ 839



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 251/503 (49%), Gaps = 22/503 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +   LC   K + A   + EM  KG  PDT TY+ +I   C    ++ AF L   M    
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY  LI+  CK G   +A++  DEM++ G +P+  TY  L+    +   MS A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD----------- 169
           E+F  M   G  P++V+++ LI    ++GQ+++A   +  M+    +PD           
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 170 ----NVL-YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
               N+  Y  +++G C+   V EA  + D M  +GC  + + Y+ +++G C+   L EA
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +F +M ERG  P+ YT+++LI    KD  ++ AL +   M + S  P+++ Y  +IDG
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CKVG+ ++A +L + M  +   PN ++Y  +I+G+   G V +   L  +M  KG  P 
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
            V+   +I   C +G    A + L +M           Y  +I GF RE  +  +  L+ 
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLD 868

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN---PDRSTYTTLINGHV 461
           ++     VP +  Y +++  FC+ GR+ +  L L + +    +    D+  Y++LI    
Sbjct: 869 EIAENVAVPIIPAYRILIDSFCKAGRL-ELALELHKEMSSCTSYSAADKDLYSSLIESLS 927

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
             + + +AF  + +M++RG +P+
Sbjct: 928 LASKVDKAFELYADMIKRGGIPE 950



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 246/506 (48%), Gaps = 22/506 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LC+    + A  FL  M      P+ VTY  L+    R+  L    ++++ M  +G
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-- 118
             P    +NSLI+  C+ G    A ++L +M   G  P    YN L+   C  E +    
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424

Query: 119 ----AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
               AE+ + EM    V  + V+ S L       G+ ++A    REM S G +PD   Y+
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I   C    V  A  + +EM     V DV TY  +++  C+  +L +A   F+EM+  
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P+  T+T LIH + K   M+ A  LF++M  +   P++VTY  LIDG CK G++EKA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 295 NKLWADM----------ISRKIS------PNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            +++A M          +  KI       PN  +YG L++G C    V EA  L   M  
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           +G +P  +  + +I G+C+ G   +A    +KM   G  P+  +Y++LI+   +++ +D 
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  ++S+M      P+VI Y  ++ G C+ G+  ++  ++  M EKG +P+  TYT +I+
Sbjct: 725 ALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMID 784

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G      + +      +M  +G  P+
Sbjct: 785 GFGKAGKVDKCLELMRQMGAKGCAPN 810



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 243/538 (45%), Gaps = 54/538 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C++   + A   L  ++  G  P  +TYN L+  +     L+ A+ +   MS  G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 61  LKPGVFT--------------------------------YNSLINGLCKKGRCDRAKEVL 88
                +T                                Y  +I+GLC+    + A + L
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFL 322

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
             M      P+  TY  LL    RK  +   + I   M   G  P    F++LI  + R+
Sbjct: 323 SRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS 382

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF-----VLE-ALKMRDEMLEKGCV 202
           G    A    ++M   G  P  V+Y I+I G C N       VLE A K   EML+   V
Sbjct: 383 GDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV 442

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           ++ V  + +   LC A    +A  +  EM+ +G  PD  T++ +I   C    ++ A  L
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M    + PD+ TY  LID FCKVG +++A K + +M+    +PN ++Y  LI+ Y  
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM----------- 371
              ++ A  L+  M+ +G  P +V+   +I G+C+SG   KA +  ++M           
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622

Query: 372 ---VSEG--VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              + +G   DP+  +Y  L++G  +   + +A  L+  M  +G  P+ I Y+ ++ GFC
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G++ +++++  +M E+G  P+  TY++LI+       L  A +    ML+    P+
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 211/450 (46%), Gaps = 51/450 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K  K+ SA      M  +G  P+ VTY  LI+ +C+ G +E+A Q+   M G  
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 61  ----------------LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                             P +FTY +L++GLCK  +   A+++LD M   G  P+   Y+
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   + EA+ +F +MS RG  P++ ++S+LI    ++ +LD AL     M   
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ ++YT +I+G C+ G   EA ++   M EKGC  +VVTY  +++G  +A  + + 
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            +L  +M  +G  P+F T+  LI+  C  G ++ A  L D M Q      +  Y  +I+G
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEG 855

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           F +  E   +  L  ++      P   +Y ILI+ +C  G +  A  L  EM        
Sbjct: 856 FNR--EFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM-------- 905

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
             SC +           S AD+ L              Y++LI        +DKAF L +
Sbjct: 906 -SSCTSY----------SAADKDL--------------YSSLIESLSLASKVDKAFELYA 940

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDS 434
            M  +G +P++  +  ++ G  R  R  ++
Sbjct: 941 DMIKRGGIPELSIFFYLVKGLIRINRWEEA 970



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 185/422 (43%), Gaps = 9/422 (2%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N LI   C+ G  + A E L  +  +G  P   TYN L+      + +  A  +  EMS 
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G   D  +    + +  + G+   AL    + +      D V+YT +I+G C      E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASLFEE 317

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A+     M    C+ +VVTY  +L G  R + L     + + M+  G +P    F +LIH
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC------KVGEMEKANKLWADMI 302
            +C+ G+ + A  L   M     +P  V YN LI G C       +  +E A K + +M+
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              +  N ++   L    C  G   +A+ +  EM+ KG  P   + + +I   C +    
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            A     +M S  V PD  +Y  LI+ F +   + +A     +M   G  P+V+TY  ++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
             + +  +M  +  +   M+ +G  P+  TYT LI+GH     +++A + +  M     +
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 483 PD 484
           PD
Sbjct: 618 PD 619



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 158/369 (42%), Gaps = 44/369 (11%)

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           + RE++         L  ++I   CRNG    AL+    + + G     +TYN ++    
Sbjct: 184 FLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
            A  L  A  +  EM + G   D YT    +H  CK G   +AL L +   ++  K D V
Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTV 300

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            Y  +I G C+    E+A    + M S    PN ++Y IL+ G      +    R+   M
Sbjct: 301 IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMM 360

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           + +G  P+    N++I  YCRSGD S A + L KM   G  P  + YN LI G    E +
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420

Query: 397 -----------------------------------------DKAFALVSKMENQGLVPDV 415
                                                    +KA++++ +M ++G +PD 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            TY+ ++   C   ++ ++ L+   M    + PD  TYT LI+       L++A ++ DE
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 476 MLQRGFVPD 484
           M++ G  P+
Sbjct: 541 MVRDGCAPN 549



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 35/229 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K D A   +  ME+KG +P+ VTY  +I+ + + G +++  +LM  M  KG
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ------------------------MGL 96
             P   TY  LIN  C  G  D A ++LDEM Q                        +GL
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGL 866

Query: 97  ---------SPDTATYNTLLVESCRKENMSEAEEIFCEMSR--RGVAPDIVSFSTLIGIF 145
                     P    Y  L+   C+   +  A E+  EMS      A D   +S+LI   
Sbjct: 867 LDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESL 926

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           S   ++D+A   + +M   G +P+  ++  ++ G  R     EAL++ D
Sbjct: 927 SLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 268/491 (54%), Gaps = 11/491 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+  L +M + G  P+++TYN+LI+ Y   G   E+ ++   MS  G
Sbjct: 266 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 325

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL------VESCRKE 114
           + P V   NS I+ L K GR + AK + D M+  G  PD  +Y+T+L       +SC   
Sbjct: 326 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC--- 382

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            +++   IF  M  +G+AP+   F+ LI  ++R G +D+A++ F +M++ G++PD V + 
Sbjct: 383 -LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 441

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I+  CR G + +AL   + M++ G       Y  ++ G C    L +A +L +EM+ +
Sbjct: 442 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 501

Query: 235 GVFPD-FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            + P     F+++I+  CK+G + +  ++ D+M Q   +P++VT+N+L++G+C VG ME+
Sbjct: 502 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 561

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L   M S  I PN   YG L++GYC  G + +A  ++ +M+ KG+KPT V  + I+ 
Sbjct: 562 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 621

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G  ++   + A +   +M+  G      +Y  ++ G  R    D+A  L+ K+    +  
Sbjct: 622 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF 681

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D+IT+N++++   + GR  +++ +   +   GL P+  TY+ +I   + + + +EA    
Sbjct: 682 DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 741

Query: 474 DEMLQRGFVPD 484
             + + G   D
Sbjct: 742 ISVEKSGHASD 752



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 250/491 (50%), Gaps = 39/491 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   TYN LI+ Y R    +    ++  +   GL P  F+Y SLI G  K G  D+A  +
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 212

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             EM++ G+ P     N+++ E C+ + M +AE I  +M   G+APD+ ++S +I    +
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK---------------- 191
           +  +D+A     +M  AG  P+++ Y  +I+GY  +G   E+++                
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 192 -------------------MRDEMLEKGCVMDVVTYNTILNGLCRA--KMLTEADDLFNE 230
                              + D M+ KG   D+++Y+T+L+G   A    L +  ++FN 
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           ML +G+ P+ + F  LI+ + + G M+KA+ +F+ M  K + PD VT+ T+I   C++G 
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 452

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS-CN 349
           ++ A   +  M+   + P+   YG LI G C+ G + +A  L  EM+ K I P  V   +
Sbjct: 453 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 512

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +II   C+ G  ++  + +  MV  G  P+ +++N+L+ G+    NM++AFAL+  M + 
Sbjct: 513 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 572

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+ P+   Y  ++ G+C+ GR+ D+  +   M+ KG+ P    Y+ +++G         A
Sbjct: 573 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 632

Query: 470 FRFHDEMLQRG 480
            +   EM++ G
Sbjct: 633 KKMFHEMIESG 643



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 208/394 (52%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +   +D A +   +M+ KG+ PDTVT+ T+I++ CR G L++A    N M   G
Sbjct: 408 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 467

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES-CRKENMSEA 119
           + P    Y  LI G C  G   +AKE++ EM+   + P    Y + ++ + C++  ++E 
Sbjct: 468 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 527

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++I   M + G  P++V+F++L+  +   G ++ A      M S G+ P+  +Y  +++G
Sbjct: 528 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 587

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+NG + +AL +  +ML KG     V Y+ IL+GL +A+  T A  +F+EM+E G    
Sbjct: 588 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 647

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+  ++ G C++   ++A  L + +   ++K DI+T+N +I    KVG  ++A +L+ 
Sbjct: 648 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 707

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +Y ++I          EA  L+  +   G        N I++      
Sbjct: 708 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 767

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           + +KA  +LS +    +  ++ + + L + F RE
Sbjct: 768 EVAKASNYLSIIGENNLTLEASTISLLASLFSRE 801



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 176/406 (43%), Gaps = 77/406 (18%)

Query: 119 AEEIFCEMSR----RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           A E+F  M R    R   P I +++ LI  + R  + D  L     +   GL PD+  Y+
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           +I  G+ ++G V                                    +A  LF EM+E+
Sbjct: 196 LIY-GFVKDGEV-----------------------------------DKAHCLFLEMMEQ 219

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           GV P      ++I   CK   M+KA ++   M    I PD+ TY+ +IDG CK   M+KA
Sbjct: 220 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 279

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            ++   M+     PN I+Y  LI+GY   G   E+ R++ +M   G+ PT+ +CN+ I  
Sbjct: 280 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 339

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNT----------------------------- 385
             + G  ++A      MV +G  PD ISY+T                             
Sbjct: 340 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 399

Query: 386 --------LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
                   LIN + R   MDKA  +   M+N+G++PD +T+  +++  CR GR+ D+   
Sbjct: 400 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 459

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              M++ G+ P  + Y  LI G  +   L +A     EM+ +   P
Sbjct: 460 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 505



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 146/289 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ ++   K  +  M Q G  P+ VT+N+L+  YC  G +EEAF L+++M+  G
Sbjct: 514 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  + Y +L++G CK GR D A  V  +ML  G+ P +  Y+ +L    +    + A+
Sbjct: 574 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 633

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM   G    I ++  ++G   RN   D A M   ++ +  +  D + + I+I+  
Sbjct: 634 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 693

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA ++ D +   G V ++ TY+ ++  L + +   EAD+LF  + + G   D 
Sbjct: 694 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 753

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                ++        + KA N   I+ + ++  +  T + L   F + G
Sbjct: 754 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 802


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 269/494 (54%), Gaps = 15/494 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  K  + + A   L E  +   +P+ + Y T+IN +C+ G +++AF+L++ M  +G
Sbjct: 82  LLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERG 141

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG--LSPDTATYNTLLVESCRKENMSE 118
           +K  V  +++LI GLC+KGR D   E L++   MG   SP+  TYNT++   C+   + E
Sbjct: 142 VKMDVLLHSTLIQGLCRKGRID---EALEQFKSMGEECSPNVITYNTVVNGLCKANRIDE 198

Query: 119 AEEIFCEMSRR-----GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           A E+F +M +R     G  PD++S+ST+I    +  ++D+A  YF+ M++ G  P+ V Y
Sbjct: 199 ALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTY 258

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           + +I+G C+     E L++   M EKG  ++++ +N +L+ L +     +A   F  +L+
Sbjct: 259 SSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 318

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G  P+  T+   +HG CK G +++A  +   M +  + PD++TY+++IDGFCK G M+K
Sbjct: 319 SGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 378

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A+ ++  M+  +  P+ +++  L++G+       EAFR+  +MV  G  P L + N ++ 
Sbjct: 379 ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMD 438

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C +     A E   KM  +   PD  +Y  LI    R   +D+A   +  ME   +VP
Sbjct: 439 CVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 498

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           +    + ++   C+QG + ++  +L  ++E G  P   T+  L    V +  L++ +   
Sbjct: 499 NGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKIL----VEELYLRKKWEAA 554

Query: 474 DEMLQR-GFVPDDA 486
            ++L+  GFV D A
Sbjct: 555 SKLLRSPGFVADAA 568



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 254/555 (45%), Gaps = 73/555 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++D A   L EM+++GV  D + ++TLI   CR+G ++EA +   SM G+ 
Sbjct: 117 VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEE 175

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEM-----LQMGLSPDTATYNTLLVESCRKEN 115
             P V TYN+++NGLCK  R D A E+ D+M        G  PD  +Y+T++   C+ + 
Sbjct: 176 CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 235

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLI------------------------GI------- 144
           + +A E F  M   G AP++V++S+LI                        GI       
Sbjct: 236 VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNA 295

Query: 145 ----FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
                 +N + ++A  +F  +  +G  P+ V Y + ++G C+ G V EA ++  EM+E  
Sbjct: 296 MLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK 355

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              DV+TY++I++G C+A  + +ADD+F  M+     P   TF TL+HG  +     +A 
Sbjct: 356 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 415

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            + + M      P + TYN L+D  C    +E A +++  M  +K  P+  +Y  LI   
Sbjct: 416 RVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCL 475

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP-- 378
           C    V EA      M    + P    C+ +++  C+ G+  +A   L  +V  G  P  
Sbjct: 476 CRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLG 535

Query: 379 ------------------------------DSISYNTLINGFVREENMDKAFALVSKMEN 408
                                         D+ +Y+  +    +    D+A  ++ +M  
Sbjct: 536 ETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVL 595

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G+ PD  TY  +L   C   R+  +     +M  +G  P   TYT LI    S +   E
Sbjct: 596 KGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADE 655

Query: 469 AFRFHDEMLQRGFVP 483
           AFR  + M+  GF P
Sbjct: 656 AFRIFEAMVAAGFTP 670



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 202/362 (55%), Gaps = 6/362 (1%)

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           ++ G   +  + + L+  F +  + + A    +E       P+ ++YT +ING+C+ G V
Sbjct: 68  NKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQV 127

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A ++ DEM E+G  MDV+ ++T++ GLCR   + EA + F  M E    P+  T+ T+
Sbjct: 128 DQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTV 186

Query: 247 IHGHCKDGNMNKALNLFDIMTQK-----SIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           ++G CK   +++AL LFD M ++       +PD+++Y+T+ID  CK   ++KA + +  M
Sbjct: 187 VNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM 246

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            +   +PN ++Y  LI+G C +   +E   L   M  KG    ++  N ++    ++ + 
Sbjct: 247 RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 306

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            KA +F  +++  G  P+ ++YN  ++G  +   +D+A+ ++ +M    + PDVITY+ I
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSI 366

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + GFC+ GRM  ++ +  RM+     P   T+ TL++G       +EAFR H++M+  GF
Sbjct: 367 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF 426

Query: 482 VP 483
           +P
Sbjct: 427 IP 428



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 179/389 (46%), Gaps = 44/389 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++AL K+ + + A  F   + + G  P+ VTYN  ++  C+ G ++EA++++  M    
Sbjct: 296 MLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK 355

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVL-------------------------------- 88
           + P V TY+S+I+G CK GR D+A +V                                 
Sbjct: 356 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 415

Query: 89  ---DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
              ++M+  G  P   TYN L+   C  +++  A EI+ +M R+   PD  +++ LI   
Sbjct: 416 RVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCL 475

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R  ++D A  +   M++  +VP+  +   ++   C+ G V EA  + D ++E GC    
Sbjct: 476 CRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLG 535

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T+  ++  L   K    A  L       G   D  T++  +   CK G  ++A+ + + 
Sbjct: 536 ETFKILVEELYLRKKWEAASKLLRS---PGFVADAATYSLCVAEICKAGKPDEAVEVIEQ 592

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K ++PD  TY  ++   C +  +E A   +  M SR  +P  ++Y +LI   CS   
Sbjct: 593 MVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADM 652

Query: 326 VTEAFRLWYEMVGKGIKP------TLVSC 348
             EAFR++  MV  G  P      TL SC
Sbjct: 653 ADEAFRIFEAMVAAGFTPQAQTMRTLSSC 681



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 58/132 (43%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           +   G   D  TY+  +   C+ G  +EA +++  M  KG++P   TY +++  LC   R
Sbjct: 558 LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDR 617

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A    ++M   G +P   TY  L+ E+C  +   EA  IF  M   G  P   +  T
Sbjct: 618 VESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRT 677

Query: 141 LIGIFSRNGQLD 152
           L       G  D
Sbjct: 678 LSSCLRDAGYQD 689



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 394 ENMDKAFALVSKMENQ-GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           E+ D A+       N+ G   +  T  V+L  F +  R  ++  +L   +E    P+   
Sbjct: 54  EDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIM 113

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           YTT+ING      + +AF   DEM +RG
Sbjct: 114 YTTVINGFCKAGQVDQAFELLDEMKERG 141



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 37/79 (46%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC   +++SA     +M  +G  P  VTY  LI   C     +EAF++  +M   G
Sbjct: 608 VLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAG 667

Query: 61  LKPGVFTYNSLINGLCKKG 79
             P   T  +L + L   G
Sbjct: 668 FTPQAQTMRTLSSCLRDAG 686


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/420 (33%), Positives = 222/420 (52%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           T++YN L+    + G  +  +   N M   G  P  +TY  L+  LC+  R + A+ V  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
            M   G SP+  +Y+ L+   CR + + EA E+  EM   G  P++V++ +L+    + G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           +L  A+  F  M   G  PD V+Y ++I+G+ + G + EA ++ +EMLEKGC+  V TYN
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           ++L+G  R         LF +ML +G  P+ +TF  L+ G CK G+M +A  LF  M   
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
              PD+V+YNTLI G C  G+  +A +L  +MI   + P+ +SY ILI+GY   G +  A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            +L+YE+   G++P   S +TII   CR+G    A      M++ G  PD+     L+ G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             R E + ++  L   M     VP +  YN+++   C+  R  D   I   + E+G +PD
Sbjct: 377 LCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 140/421 (33%), Positives = 220/421 (52%)

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
           G  +YN L+  L K GRCD      ++ML  G  P+T TY  LL   C+ +   EA  +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
             M+ +G +P++ S+S LI    R  ++D A     EM   G  P+ V Y  +++G C+ 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + EA+ +   M+ +GC  D V YN +++G  +   + EA  LF EMLE+G  P  +T+
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +L+ G  + G   +  +LF  M ++   P+I T+N L+DGFCK+G+M +A++L+ +M S
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
               P+ +SY  LI G CS G   EA RL  EM+  G+ P +VS N +I GY +SG    
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A +   ++   G++PD+ SY+T+I+   R   +  AF +   M   G  PD      ++ 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G CR  R+ +S  +   M++    P    Y  L+          +      E+ +RGF P
Sbjct: 376 GLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435

Query: 484 D 484
           D
Sbjct: 436 D 436



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 211/422 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K  + D       +M   G  P+T TY  L+ + C+    EEA  +   M+ +G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VF+Y+ LI GLC+  + D A E+L+EM+  G  P+  TY +LL   C+   + EA 
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M  RG  PD V ++ LI  FS+ G +  A   F EM   G +P    Y  +++G+
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G       +  +ML +GCV ++ T+N +L+G C+   + EA  LF EM   G  PD 
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI G C  G  ++A  L   M +  + PDIV+YN LIDG+ K G ++ A KL+ +
Sbjct: 263 VSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    + P+  SY  +I+  C  G V  AF ++ +M+  G  P       ++ G CR   
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +++ E    MV     P    YN L+    + +  D    +  ++  +G  PDV    V
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKV 442

Query: 421 IL 422
           IL
Sbjct: 443 IL 444



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 210/399 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+  + + A+     M  +G  P+  +Y+ LI   CR   ++EA +L+N M   G
Sbjct: 58  LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY SL++GLCK G+   A ++   M+  G  PD   YN L+    +K +M EA 
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G  P + ++++L+  FSR G+  R    F++M   G VP+   +  +++G+
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G ++EA ++  EM   GC  DVV+YNT++ G+C      EA  L  EM+  GV PD 
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDI 297

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LI G+ K G ++ A+ LF  + +  ++PD  +Y+T+ID  C+ G++  A  ++ D
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKD 357

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI+   +P+      L+ G C    +TE+  L+  MV     P +   N ++   C++  
Sbjct: 358 MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKR 417

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           +    E   ++   G  PD      ++    R ++ D A
Sbjct: 418 SDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 194/351 (55%)

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           +S++ L+ + +++G+ D     + +M +AG VP+   Y  ++   C+     EA  +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M  +GC  +V +Y+ ++ GLCR + + EA +L NEM++ G  P+  T+ +L+ G CK G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           + +A++LF  M  +   PD V YN LIDGF K G+M +A +L+ +M+ +   P   +Y  
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           L++G+   G       L+ +M+ +G  P + + N ++ G+C+ GD  +A     +M S G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             PD +SYNTLI G   +    +A  L+ +M   G+ PD+++YN+++ G+ + G +  + 
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            + + + + GL PD  +Y+T+I+       +  AF    +M+  G  PD A
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA 368



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 183/365 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  K+D A   L EM   G  P+ VTY +L++  C+ G L+EA  L + M  +G
Sbjct: 93  LIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG 152

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    YN LI+G  KKG    A  + +EML+ G  P   TYN+LL    RK      +
Sbjct: 153 CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQ 212

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M R+G  P+I +F+ L+  F + G +  A   F EM+S G  PD V Y  +I G 
Sbjct: 213 SLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGM 272

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EA ++  EM+  G   D+V+YN +++G  ++  L  A  LF E+ + G+ PD 
Sbjct: 273 CSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDA 332

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++++T+I   C+ G +  A  +F  M      PD      L+ G C+   + ++ +L+  
Sbjct: 333 FSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQA 392

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+  +  P    Y +L+   C      +   +++E+  +G  P +     I++   RS D
Sbjct: 393 MVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDD 452

Query: 361 ASKAD 365
              A+
Sbjct: 453 KDAAE 457


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/486 (30%), Positives = 266/486 (54%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +VNALCK+   ++A+MF+ ++ + G   D+    +L+  +CR   L +A ++ + MS + 
Sbjct: 201 IVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEV 260

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P   +Y+ LI+GLC+ GR + A  + D+M + G  P T TY  L+   C +  + +A
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKA 320

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM  RG  P++ +++ LI    R+G+++ A    R+M    + P  + Y  +ING
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC++G V+ A ++   M ++ C  +V T+N ++ GLCR     +A  L   ML+ G+ PD
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++  LI G C++G+MN A  L   M    I+PD +T+  +I+ FCK G+ + A+    
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLG 500

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + IS + ++   LI+G C +G   +A  +   +V   I  T  S N I+    +  
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGC 560

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +    L K+   G+ P  ++Y TL++G +R  ++  +F ++  M+  G +P+V  Y 
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +I+ G C+ GR+ ++E +L  M + G++P+  TYT ++ G+V+   L  A      M++R
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680

Query: 480 GFVPDD 485
           G+  +D
Sbjct: 681 GYELND 686



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 240/503 (47%), Gaps = 23/503 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC    ID A     EM  +G  P+  TY  LI+  CR+G +EEA  +   M    
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LING CK GR   A E+L  M +    P+  T+N L+   CR     +A 
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G++PDIVS++ LI    R G ++ A      M    + PD + +T IIN +
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A      ML KG  +D VT  T+++G+C+     +A  +   +++  +    
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++   ++    K   + + L +   + +  + P +VTY TL+DG  + G++  + ++   
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN   Y I+ING C  G V EA +L   M   G+ P  V+   ++KGY  +G 
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFV-------------------REENMDKAFA 401
             +A E +  MV  G + +   Y++L+ GFV                   RE + +    
Sbjct: 667 LDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINE 726

Query: 402 LVSKMEN-QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
           L+S +E   G +  +  +  ++T  C++GR  +S  ++  ++E+G+  +++    ++  +
Sbjct: 727 LISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEKAM-DIIMESY 783

Query: 461 VSQNNLKEAFRFHDEMLQRGFVP 483
            S+    +       +L+ GFVP
Sbjct: 784 CSKKKHTKCMELITLVLKSGFVP 806



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 216/496 (43%), Gaps = 124/496 (25%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+D KI+ A     +M +  ++P  +TYN LIN YC++G +  AF+L+  M  + 
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V T+N L+ GLC+ G+  +A  +L  ML  GLSPD  +YN L+   CR+ +M+ A 
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461

Query: 121 EI----------------------FCE-------------MSRRGVAPDIVSFSTLIG-- 143
           ++                      FC+             M R+G++ D V+ +TLI   
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521

Query: 144 ---------------------------------IFSRNGQLDRALMYFREMKSAGLVPDN 170
                                            + S+  ++   L    ++   GLVP  
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSV 581

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           V YT +++G  R+G +  + ++ + M   GC+ +V  Y  I+NGLC+   + EA+ L + 
Sbjct: 582 VTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF----- 285
           M + GV P+  T+T ++ G+  +G +++AL     M ++  + +   Y++L+ GF     
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701

Query: 286 ------------------------------------------------CKVGEMEKANKL 297
                                                           CK G  +++N L
Sbjct: 702 GIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDL 761

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +++ R +     +  I++  YCS    T+   L   ++  G  P+  S   +I+G  +
Sbjct: 762 VQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKK 820

Query: 358 SGDASKADEFLSKMVS 373
            GDA +A E + ++++
Sbjct: 821 EGDAERARELVMELLT 836



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 157/370 (42%), Gaps = 94/370 (25%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS----- 55
           ++NA CK  K D A  FL  M +KG+  D VT  TLI+  C+ G   +A  ++ +     
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541

Query: 56  --------------------------MSGK----GLKPGVFTYNSLINGLCKKGRCDRAK 85
                                     M GK    GL P V TY +L++GL + G    + 
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L+ M   G  P+   Y  ++   C+   + EAE++   M   GV+P+ V+++ ++  +
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE----------ALKMRD- 194
             NG+LDRAL   R M   G   ++ +Y+ ++ G+  +   ++          AL+  D 
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDP 721

Query: 195 -------EMLEK--GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-------- 237
                   ++E+  GC+  +  +  ++  LC+     E++DL   +LERGVF        
Sbjct: 722 ECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDII 779

Query: 238 --------------------------PDFYTFTTLIHGHCKDGNMNKALNL-FDIMTQKS 270
                                     P F +F  +I G  K+G+  +A  L  +++T   
Sbjct: 780 MESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNG 839

Query: 271 I--KPDIVTY 278
           +  K  ++TY
Sbjct: 840 VVEKSGVLTY 849


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/494 (31%), Positives = 252/494 (51%), Gaps = 22/494 (4%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +  ++   K  L  M  +G YP    +N+LI+AYCR G    A++L+  M   G +PG  
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405

Query: 67  TYNSLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            YN LI G+C   +       + A++   EML   +  +    + L    C      +A 
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM  +G  PD  ++S +IG+     ++D A + F EMKS  +VPD   YTI+I+ +
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A K  DEM+  GC  +VVTY  +++   +A+ ++ A++LF  ML  G  P+ 
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD----------------IVTYNTLIDG 284
            T+T LI GHCK G + KA  ++  M   +  PD                I TY  L+DG
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CK  ++++A  L   M      PN+I Y  LI+G+C +G + EA  ++ +M  +G  P 
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + + +++I    +      A + LS+M+     P+ I Y  +I+G  +    D+A+ L+S
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            ME +G  P+V+TY  ++ GF + G++     ++ +M  KG  P+  TY  LIN   +  
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 465 NLKEAFRFHDEMLQ 478
            L +A +  DEM Q
Sbjct: 826 LLDDAHQLLDEMKQ 839



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 251/503 (49%), Gaps = 22/503 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +   LC   K + A   + EM  KG  PDT TY+ +I   C    ++ AF L   M    
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY  LI+  CK G   +A++  DEM++ G +P+  TY  L+    +   MS A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD----------- 169
           E+F  M   G  P++V+++ LI    ++GQ+++A   +  M+    +PD           
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 170 ----NVL-YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
               N+  Y  +++G C+   V EA  + D M  +GC  + + Y+ +++G C+   L EA
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +F +M ERG  P+ YT+++LI    KD  ++ AL +   M + S  P+++ Y  +IDG
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CKVG+ ++A +L + M  +   PN ++Y  +I+G+   G V +   L  +M  KG  P 
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
            V+   +I   C +G    A + L +M           Y  +I GF RE  +  +  L+ 
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLD 868

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN---PDRSTYTTLINGHV 461
           ++     VP +  Y +++  FC+ GR+ +  L L + +    +    D+  Y++LI    
Sbjct: 869 EIAENVAVPIIPAYRILIDSFCKAGRL-ELALELHKEMSSCTSYSAADKDLYSSLIESLS 927

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
             + + +AF  + +M++RG +P+
Sbjct: 928 LASKVDKAFELYADMIKRGGIPE 950



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 246/506 (48%), Gaps = 22/506 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LC+    + A  FL  M      P+ VTY  L+    R+  L    ++++ M  +G
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-- 118
             P    +NSLI+  C+ G    A ++L +M   G  P    YN L+   C  E +    
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424

Query: 119 ----AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
               AE+ + EM    V  + V+ S L       G+ ++A    REM S G +PD   Y+
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I   C    V  A  + +EM     V DV TY  +++  C+  +L +A   F+EM+  
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P+  T+T LIH + K   M+ A  LF++M  +   P++VTY  LIDG CK G++EKA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 295 NKLWADM----------ISRKIS------PNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            +++A M          +  KI       PN  +YG L++G C    V EA  L   M  
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           +G +P  +  + +I G+C+ G   +A    +KM   G  P+  +Y++LI+   +++ +D 
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  ++S+M      P+VI Y  ++ G C+ G+  ++  ++  M EKG +P+  TYT +I+
Sbjct: 725 ALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMID 784

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G      + +      +M  +G  P+
Sbjct: 785 GFGKAGKVDKCLELMRQMGAKGCAPN 810



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 243/538 (45%), Gaps = 54/538 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C++   + A   L  ++  G  P  +TYN L+  +     L+ A+ +   MS  G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 61  LKPGVFT--------------------------------YNSLINGLCKKGRCDRAKEVL 88
                +T                                Y  +I+GLC+    + A + L
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFL 322

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
             M      P+  TY  LL    RK  +   + I   M   G  P    F++LI  + R+
Sbjct: 323 SRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS 382

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF-----VLE-ALKMRDEMLEKGCV 202
           G    A    ++M   G  P  V+Y I+I G C N       VLE A K   EML+   V
Sbjct: 383 GDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV 442

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           ++ V  + +   LC A    +A  +  EM+ +G  PD  T++ +I   C    ++ A  L
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M    + PD+ TY  LID FCKVG +++A K + +M+    +PN ++Y  LI+ Y  
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM----------- 371
              ++ A  L+  M+ +G  P +V+   +I G+C+SG   KA +  ++M           
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622

Query: 372 ---VSEG--VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              + +G   DP+  +Y  L++G  +   + +A  L+  M  +G  P+ I Y+ ++ GFC
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G++ +++++  +M E+G  P+  TY++LI+       L  A +    ML+    P+
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 211/450 (46%), Gaps = 51/450 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K  K+ SA      M  +G  P+ VTY  LI+ +C+ G +E+A Q+   M G  
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 61  ----------------LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                             P +FTY +L++GLCK  +   A+++LD M   G  P+   Y+
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   + EA+ +F +MS RG  P++ ++S+LI    ++ +LD AL     M   
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ ++YT +I+G C+ G   EA ++   M EKGC  +VVTY  +++G  +A  + + 
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            +L  +M  +G  P+F T+  LI+  C  G ++ A  L D M Q      +  Y  +I+G
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEG 855

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           F +  E   +  L  ++      P   +Y ILI+ +C  G +  A  L  EM        
Sbjct: 856 FNR--EFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM-------- 905

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
             SC +           S AD+ L              Y++LI        +DKAF L +
Sbjct: 906 -SSCTSY----------SAADKDL--------------YSSLIESLSLASKVDKAFELYA 940

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDS 434
            M  +G +P++  +  ++ G  R  R  ++
Sbjct: 941 DMIKRGGIPELSIFFYLVKGLIRINRWEEA 970



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 185/422 (43%), Gaps = 9/422 (2%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N LI   C+ G  + A E L  +  +G  P   TYN L+      + +  A  +  EMS 
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G   D  +    + +  + G+   AL    + +      D V+YT +I+G C      E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASLFEE 317

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A+     M    C+ +VVTY  +L G  R + L     + + M+  G +P    F +LIH
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC------KVGEMEKANKLWADMI 302
            +C+ G+ + A  L   M     +P  V YN LI G C       +  +E A K + +M+
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              +  N ++   L    C  G   +A+ +  EM+ KG  P   + + +I   C +    
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            A     +M S  V PD  +Y  LI+ F +   + +A     +M   G  P+V+TY  ++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
             + +  +M  +  +   M+ +G  P+  TYT LI+GH     +++A + +  M     +
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 483 PD 484
           PD
Sbjct: 618 PD 619



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 158/369 (42%), Gaps = 44/369 (11%)

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           + RE++         L  ++I   CRNG    AL+    + + G     +TYN ++    
Sbjct: 184 FLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
            A  L  A  +  EM + G   D YT    +H  CK G   +AL L +   ++  K D V
Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTV 300

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            Y  +I G C+    E+A    + M S    PN ++Y IL+ G      +    R+   M
Sbjct: 301 IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMM 360

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           + +G  P+    N++I  YCRSGD S A + L KM   G  P  + YN LI G    E +
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420

Query: 397 -----------------------------------------DKAFALVSKMENQGLVPDV 415
                                                    +KA++++ +M ++G +PD 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            TY+ ++   C   ++ ++ L+   M    + PD  TYT LI+       L++A ++ DE
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 476 MLQRGFVPD 484
           M++ G  P+
Sbjct: 541 MVRDGCAPN 549


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 268/521 (51%), Gaps = 44/521 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ-LMNSMSGK 59
           +++  C+  + D    F   + + G+  D +  NT +   C     +EA   L++ MS  
Sbjct: 171 LMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSEL 230

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM----GLSPDTATYNTLLVESCRKEN 115
           G  P  F+YN++I  LC      R++E LD +L+M    G SPD  +Y  ++     +  
Sbjct: 231 GCVPDAFSYNTVIKSLCGG---SRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGE 287

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +S+A  +F EM ++GV P++V++++++    +   +D+A +  R+M    + PD V YT 
Sbjct: 288 ISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTA 347

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I+GY   G   EA KM  EM  +G + D+VT+N++++ LC+ K   EA ++F+ +  +G
Sbjct: 348 MIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKG 407

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             PD  +++ L+HG+  +G      NLF  MT   I  D   +N LI+   K G M++A 
Sbjct: 408 HKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEAL 467

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            ++ +M  + +SPN ++Y  +I   C MG + +A     +M+  G+KP  V  +++I+G+
Sbjct: 468 LIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGF 527

Query: 356 CRSGDASKADEFLSKMVSEGVD------------------------------------PD 379
           C  GD  KA E +S+M+ +G+                                     PD
Sbjct: 528 CTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPD 587

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             ++N+LI+G+     MDKAF ++  M + G  PDV+TY+ ++ G+ + GR+ D  ++  
Sbjct: 588 IFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFR 647

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            M+ K + P   TY+ +++G         A +   EM++ G
Sbjct: 648 EMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESG 688



 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 255/484 (52%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ALCK   +D A++ L +M    + PD VTY  +I+ Y   G  +EA ++   M+ +G
Sbjct: 313 IVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREG 372

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + T+NSL++ LCK  R   A E+   +   G  PD  +Y+ LL     +    +  
Sbjct: 373 LIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMN 432

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+  G+  D   F+ LI   ++ G +D AL+ F EM+  G+ P+ V Y  +I   
Sbjct: 433 NLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAAL 492

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV-FPD 239
           CR G + +A++   +M+  G   + V Y++++ G C    L +A +L +EM+++G+  P+
Sbjct: 493 CRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPN 552

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F+++IH  C +G +  A ++F+++     +PDI T+N+LIDG+C VG+M+KA  +  
Sbjct: 553 ITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLD 612

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+S    P+ ++Y  LINGY   G + +   L+ EM+ K +KPT V+ + ++ G  R+G
Sbjct: 613 AMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAG 672

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             S A +   +M+  G      +Y  ++ G  R    D+A  L  K+    L  ++   N
Sbjct: 673 RTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILN 732

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++    +  R  ++  +   +   GL P+ STY  +I   + + +++EA      M + 
Sbjct: 733 TMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKT 792

Query: 480 GFVP 483
           G  P
Sbjct: 793 GCAP 796



 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 261/459 (56%), Gaps = 2/459 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           ++AKMF  EM ++G+ PD VT+N+L+++ C+    +EA ++ +S++ KG KP + +Y+ L
Sbjct: 360 EAAKMFK-EMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSIL 418

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++G   +GR      +   M   G+  D+  +N L+    ++  M EA  IF EM  +GV
Sbjct: 419 LHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGV 478

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
           +P++V+++T+I    R G+L  A+    +M S GL P+ V+Y  +I G+C +G +++A +
Sbjct: 479 SPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKE 538

Query: 192 MRDEMLEKGCVMDVVTY-NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           +  EM+++G     +T+ ++I++ LC    +  A D+FN ++  G  PD +TF +LI G+
Sbjct: 539 LVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGY 598

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C  G M+KA  + D M     +PD+VTY+TLI+G+ K G ++    L+ +M+ +++ P  
Sbjct: 599 CLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTT 658

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y ++++G    G  + A ++++EM+  G   ++ +   I++G CR+    +A     K
Sbjct: 659 VTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHK 718

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           + +  +  +    NT+I+   + +  ++A  L + +   GLVP+  TY V++    ++G 
Sbjct: 719 LGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGS 778

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           + +++++   M + G  P       +I   + +  + +A
Sbjct: 779 VEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 251/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L  + +I  A     EM QKGV P+ VTYN++++A C+   +++A  ++  M    
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TY ++I+G    GR   A ++  EM + GL PD  T+N+L+   C+ +   EA 
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF  ++ +G  PDI+S+S L+  ++  G+       F  M   G+V D+  + I+IN +
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EAL +  EM  +G   +VVTY T++  LCR   L +A +  ++M+  G+ P+ 
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517

Query: 241 YTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             + +LI G C  G++ KA  L  ++M Q   +P+I  ++++I   C  G +  A  ++ 
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFN 577

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +I     P+  ++  LI+GYC +G + +AF +   MV  G +P +V+ +T+I GY +SG
Sbjct: 578 LVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSG 637

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
                     +M+ + V P +++Y+ +++G  R      A  +  +M   G    + TY 
Sbjct: 638 RIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYT 697

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +IL G CR     ++  +  ++    L  + +   T+I+        +EA      +   
Sbjct: 698 IILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSAS 757

Query: 480 GFVPD 484
           G VP+
Sbjct: 758 GLVPN 762



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 238/458 (51%), Gaps = 38/458 (8%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V TY  L++  C+  R D        +L+ GL  D    NT L   C  +   EA  +  
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLL 224

Query: 125 E-MSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCR 182
             MS  G  PD  S++T+I       +   AL M  R  K  G  PD V YT++I+G   
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFM 284

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G + +A  + +EM++KG V +VVTYN+I++ LC+A+ + +A+ +  +M +  + PD  T
Sbjct: 285 EGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVT 344

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +T +IHG+   G   +A  +F  MT++ + PDIVT+N+L+D  CK    ++A +++  + 
Sbjct: 345 YTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIA 404

Query: 303 SRKISPNYISYGILINGYCSMGHVT----------------------------------- 327
           ++   P+ ISY IL++GY + G                                      
Sbjct: 405 TKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMD 464

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  ++ EM G+G+ P +V+  T+I   CR G  + A E LS+M+S G+ P+++ Y++LI
Sbjct: 465 EALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLI 524

Query: 388 NGFVREENMDKAFALVSKMENQGLV-PDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
            GF    ++ KA  LVS+M +QG+  P++  ++ I+   C +GR+ +++ +   +I  G 
Sbjct: 525 QGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGD 584

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            PD  T+ +LI+G+     + +AF   D M+  G  PD
Sbjct: 585 RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPD 622



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 214/394 (54%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  K   +D A +   EM  +GV P+ VTY T+I A CR G L +A + ++ M   G
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKENMSEA 119
           LKP    Y+SLI G C  G   +AKE++ EM+  G+  P+   +++++   C +  +  A
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNA 572

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +++F  +   G  PDI +F++LI  +   G++D+A      M SAG  PD V Y+ +ING
Sbjct: 573 QDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLING 632

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y ++G + + L +  EML K      VTY+ +L+GL RA   + A  +F+EM+E G    
Sbjct: 633 YFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMS 692

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T ++ G C++   ++A+ LF  +   ++K +I   NT+I    KV   E+A+ L+A
Sbjct: 693 ISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFA 752

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +YG++I      G V EA  ++  M   G  P+    N II+   + G
Sbjct: 753 SVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG 812

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           +  KA  ++SK+    +  ++ + + LI+ F  +
Sbjct: 813 EIVKAGYYMSKVDGTIISLEASTTSLLISLFASK 846



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 206/447 (46%), Gaps = 49/447 (10%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-------SEAEEIFCEMSRRGVAPDIV 136
           A  + DE+L+          N  L    R  +        + A  +F  + R    P +V
Sbjct: 102 AHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAGPRVV 161

Query: 137 -----SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
                ++  L+    R  + D    +F  +  AGL  D ++    +   C      EAL 
Sbjct: 162 PLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALS 221

Query: 192 MR-DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVFPDFYTFTTLIHG 249
           M    M E GCV D  +YNT++  LC      EA D+   M +  G  PD  ++T +IHG
Sbjct: 222 MLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHG 281

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
              +G ++KA NLF+ M QK + P++VTYN+++   CK   M+KA  +   M    I P+
Sbjct: 282 LFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPD 341

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y  +I+GY  +G   EA +++ EM  +G+ P +V+ N+++   C+   + +A E   
Sbjct: 342 EVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFH 401

Query: 370 KMVSEGVDPDSISYNTLINGFVREEN---------------------------------- 395
            + ++G  PD ISY+ L++G+  E                                    
Sbjct: 402 SIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRG 461

Query: 396 -MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            MD+A  + ++M  QG+ P+V+TY  ++   CR GR+ D+   L +MI  GL P+   Y 
Sbjct: 462 MMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYH 521

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +LI G  +  +L +A     EM+ +G 
Sbjct: 522 SLIQGFCTHGDLIKAKELVSEMMDQGI 548



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 161/333 (48%), Gaps = 1/333 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   C    +  AK  + EM  +G+  P+   ++++I++ C EG +  A  + N +   
Sbjct: 523 LIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHI 582

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P +FT+NSLI+G C  G+ D+A  VLD M+  G  PD  TY+TL+    +   + + 
Sbjct: 583 GDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDG 642

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM  + V P  V++S ++    R G+   A   F EM  +G       YTII+ G
Sbjct: 643 LILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQG 702

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CRN    EA+ +  ++       ++   NT+++ L + K   EA DLF  +   G+ P+
Sbjct: 703 LCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPN 762

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +I    K+G++ +A  +F  M +    P     N +I    + GE+ KA    +
Sbjct: 763 ASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMS 822

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            +    IS    +  +LI+ + S G   E  + 
Sbjct: 823 KVDGTIISLEASTTSLLISLFASKGRYREQIKF 855



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 44/231 (19%)

Query: 295 NKLWADMISRKISPNYI-SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           N++  +    ++ P  + +YGIL++  C           +  ++  G++   +  NT +K
Sbjct: 149 NRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLK 208

Query: 354 GYCRSGDASKADEFLS----KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM-EN 408
             C    A + DE LS    +M   G  PD+ SYNT+I          +A  ++ +M + 
Sbjct: 209 CLCY---AKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKG 265

Query: 409 QGLVPDV-----------------------------------ITYNVILTGFCRQGRMHD 433
            G  PDV                                   +TYN I+   C+   M  
Sbjct: 266 DGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDK 325

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +EL+L +M +  + PD  TYT +I+G+      KEA +   EM + G +PD
Sbjct: 326 AELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPD 376


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 240/428 (56%), Gaps = 5/428 (1%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL P V T+N+LINGLC +GR   A  ++++M+  GL  D  TY T++   C+  +   A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  +M    + PD+V +S +I    ++G    A   F EM   G+ P+   Y  +I+G
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C  G   +A ++  +M+E+    DV+T+N +++   +   L EA+ L +EML R +FPD
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ ++I+G CK    + A ++FD+M      PD+VT+NT+ID +C+   +++  +L  
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLR 240

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           ++  R +  N  +Y  LI+G+C + ++  A  L+ EM+  G+ P  ++CN ++ G+C + 
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 300

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A E    +    +D D+++YN +I+G  +   +D+A+ L   +   G+ PDV TYN
Sbjct: 301 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 360

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V+++GFC +  + D+ ++  +M + G  PD STY TLI G +    + ++     EM   
Sbjct: 361 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 420

Query: 480 GFVPDDAF 487
           GF   DAF
Sbjct: 421 GF-SGDAF 427



 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 237/434 (54%), Gaps = 5/434 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + ++  A   + +M  KG++ D VTY T++N  C+ G  + A  L++ M    
Sbjct: 16  LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V  Y+++I+ LCK G    A+ +  EML+ G++P+  TYN ++   C     S+A+
Sbjct: 76  IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + PD+++F+ LI    + G+L  A     EM    + PD V Y  +I G+
Sbjct: 136 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++    +A  M D M       DVVT+NTI++  CRAK + E   L  E+  RG+  + 
Sbjct: 196 CKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 251

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIHG C+  N+N A +LF  M    + PD +T N L+ GFC+  ++E+A +L+  
Sbjct: 252 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 311

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   KI  + ++Y I+I+G C    V EA+ L+  +   G++P + + N +I G+C    
Sbjct: 312 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 371

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A+    KM   G +PD+ +YNTLI G ++   +DK+  L+S+M + G   D  T  +
Sbjct: 372 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 431

Query: 421 ILTGFCRQGRMHDS 434
           +       GR+  S
Sbjct: 432 V-ADLITDGRLDKS 444



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 238/450 (52%), Gaps = 5/450 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G+ P  +T+NTLIN  C EG + EA  L+N M GKGL   V TY +++NG+CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A  +L +M +  + PD   Y+ ++   C+  + S+A+ +F EM  +G+AP++ +++ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I  F   G+   A    R+M    + PD + +  +I+   + G + EA K+ DEML + 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D VTYN+++ G C+     +A  +F+ M      PD  TF T+I  +C+   +++ +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L   ++++ +  +  TYNTLI GFC+V  +  A  L+ +MIS  + P+ I+  IL+ G+
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C    + EA  L+  +    I    V+ N II G C+     +A +    +   GV+PD 
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YN +I+GF  +  +  A  L  KM++ G  PD  TYN ++ G  + G +  S  ++  
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           M   G + D  T   ++   ++   L ++F
Sbjct: 417 MRSNGFSGDAFT-IKMVADLITDGRLDKSF 445



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 216/396 (54%), Gaps = 4/396 (1%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M+++GL+P   T+NTL+   C +  + EA  +  +M  +G+  D+V++ T++    + G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
              AL    +M+   + PD V+Y+ II+  C++G   +A  +  EMLEKG   +V TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +++G C     ++A  L  +M+ER + PD  TF  LI    K+G + +A  L D M  + 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I PD VTYN++I GFCK    + A  ++ D+++   SP+ +++  +I+ YC    V E  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           +L  E+  +G+     + NT+I G+C   + + A +   +M+S GV PD+I+ N L+ GF
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
              E +++A  L   ++   +  D + YN+I+ G C+  ++ ++  +   +   G+ PD 
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            TY  +I+G   ++ + +A     +M   G  PD++
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 392



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 167/303 (55%), Gaps = 8/303 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K+ K+  A+    EM  + ++PDTVTYN++I  +C+    ++A  + + M+   
Sbjct: 156 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA--- 212

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+N++I+  C+  R D   ++L E+ + GL  +T TYNTL+   C  +N++ A+
Sbjct: 213 -SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 271

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM   GV PD ++ + L+  F  N +L+ AL  F  ++ + +  D V Y III+G 
Sbjct: 272 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 331

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA  +   +   G   DV TYN +++G C    +++A+ LF++M + G  PD 
Sbjct: 332 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 391

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G  K G ++K++ L   M       D  T   + D     G ++K+   ++D
Sbjct: 392 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS---FSD 447

Query: 301 MIS 303
           M+S
Sbjct: 448 MLS 450


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 254/469 (54%), Gaps = 7/469 (1%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM + G      + N L+N   + G +  A  +   M   G  P  FT   +    C+ G
Sbjct: 119 EMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDG 178

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A + L EM +MGL  +   Y+ ++   CR      A ++   +  +G++P++V+++
Sbjct: 179 RVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYT 238

Query: 140 TLIGIFSRNGQLDRALMYFREMK-SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
            L+  + + G+++ A    +E+K +  +V D V Y  +INGYC+ G + +A ++RDEM++
Sbjct: 239 LLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMID 298

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G  +++  YNT++NG C+   + E + L      RGV  D Y++ TL+ G+C+ G M K
Sbjct: 299 AGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTK 358

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A    D+M +       +TYNTL++GFC  G ++ A KLW  M+ R + PN IS   L++
Sbjct: 359 AFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLD 418

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G+   G   +A  LW E + +G+   +V+ NT+I G C++   ++A+E   +M       
Sbjct: 419 GFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPC 478

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC---RQGRMHDSE 435
           DS++Y TLI+G+ +  ++ +A  +  +MEN G VP V  +N  +TG     + G+++D  
Sbjct: 479 DSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVND-- 536

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            I   M  KGL+P+  TY  LI G   + NL +A   + EM+++G  P+
Sbjct: 537 -IRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPN 584



 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 164/544 (30%), Positives = 276/544 (50%), Gaps = 61/544 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  CK  ++   +  L   E +GV  D  +YNTL++ YCR+GF+ +AF+  + M   G
Sbjct: 311 MINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNG 370

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 TYN+L+NG C +G  D A ++   ML+ G+ P+  + +TLL    +     +A 
Sbjct: 371 FTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQAL 430

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ E   RG+A ++V+ +T+I    +N ++  A   F  MK      D++ Y  +I+GY
Sbjct: 431 NLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGY 490

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++R EM   G V  V  +N+ + GL  AK   + +D+  EM  +G+ P+ 
Sbjct: 491 CKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNT 550

Query: 241 YTFTTLIHGHCKDGNMNKAL-------------NLF------------------DIMTQK 269
            T+  LI G CK+GN++ A              NLF                  +++ QK
Sbjct: 551 VTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQK 610

Query: 270 SIKPDIVT------------------------------YNTLIDGFCKVGEMEKANKLWA 299
               D++                               +N +I G CK+G +  A  L+ 
Sbjct: 611 LADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFE 670

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           D+  +   P+  +Y  LI+G  + G +  AF L  EM+   + P +V+ N++I G C+S 
Sbjct: 671 DLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSC 730

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           + S+A    +K+ S+G+ P++I+YNTLI+G  ++ N  +AF L  KM  +G+ P V TY 
Sbjct: 731 NVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYT 790

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++ G C QG M ++  +L +MIE  ++P+  TY TLI G+    N+K   + ++EM   
Sbjct: 791 ILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHIC 850

Query: 480 GFVP 483
           G +P
Sbjct: 851 GLLP 854



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 263/485 (54%), Gaps = 10/485 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEM-EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V   CK+ +++ A+  + E+ E + +  D V Y  LIN YC+ G +E+A ++ + M   
Sbjct: 240 LVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDA 299

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G++  +F YN++ING CK GR    +++L      G++ D  +YNTL+   CRK  M++A
Sbjct: 300 GVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKA 359

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E    M R G     ++++TL+  F   G +D AL  +  M   G+VP+ +  + +++G
Sbjct: 360 FETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDG 419

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + + G   +AL +  E L +G   +VVT NT++NGLC+ + +TEA++LF+ M E     D
Sbjct: 420 FFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCD 479

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G+CK G++ +A  +   M      P +  +N+ I G     +  K N +  
Sbjct: 480 SLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRV 539

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M ++ +SPN ++YG LI G+C  G++ +A  L++EMV KG+KP L  C+ ++  + R G
Sbjct: 540 EMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREG 599

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+  L K+    +  D  S +TL        N+ K   ++  +         I +N
Sbjct: 600 KVDEANLVLQKLADTDMIQDC-SASTL--------NIGKVAHIIESLAGGNHQSAKIMWN 650

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++ G C+ GR+ D+  +   +  KG  PD  TY++LI+G  +  ++  AF   DEML  
Sbjct: 651 IVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSA 710

Query: 480 GFVPD 484
              P+
Sbjct: 711 RLTPN 715



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 252/470 (53%), Gaps = 1/470 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +   I +A     +M   G  PD  T   +  AYCR+G +  A   +  M   G
Sbjct: 135 LLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMG 194

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   +  Y+++++G C+ G+ + A+++L  +   GLSP+  TY  L+   C++  M EAE
Sbjct: 195 LDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAE 254

Query: 121 EIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++  E+     +  D V++  LI  + + G+++ A     EM  AG+  +  +Y  +ING
Sbjct: 255 KVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMING 314

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G + E  K+      +G  +D  +YNT+++G CR   +T+A +  + M+  G    
Sbjct: 315 YCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGT 374

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL++G C  G ++ AL L+ +M ++ + P+ ++ +TL+DGF K G+ E+A  LW 
Sbjct: 375 TLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWK 434

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           + ++R ++ N ++   +ING C    +TEA  L++ M         ++  T+I GYC+ G
Sbjct: 435 ETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLG 494

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D  +A +   +M + G  P    +N+ I G    +   K   +  +M  +GL P+ +TY 
Sbjct: 495 DLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYG 554

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            ++ G+C++G +HD+ ++ + M+EKGL P+    + L++    +  + EA
Sbjct: 555 ALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA 604



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 204/424 (48%), Gaps = 36/424 (8%)

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
            S   A+++ LL        + +A  +F EM + G    + S + L+    + G +  A+
Sbjct: 90  FSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAV 149

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
             F++M+ AG +PD+    I+   YCR+G V  A     EM E G  +++V Y+ +++G 
Sbjct: 150 AVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGY 209

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPD 274
           CR      A  L + +  +G+ P+  T+T L+ G+CK+G M +A  +  +I   + I  D
Sbjct: 210 CRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVID 269

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
            V Y  LI+G+C+ G ME AN++  +MI   +  N   Y  +INGYC +G + E  +L  
Sbjct: 270 EVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQ 329

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
               +G+     S NT++ GYCR G  +KA E    MV  G    +++YNTL+NGF    
Sbjct: 330 ANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRG 389

Query: 395 NMDKAFALVSKMENQGLVP-----------------------------------DVITYN 419
            +D A  L   M  +G+VP                                   +V+T N
Sbjct: 390 AIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTIN 449

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G C+  RM ++E +  RM E     D  TY TLI+G+    +L  A +   EM   
Sbjct: 450 TVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENL 509

Query: 480 GFVP 483
           GFVP
Sbjct: 510 GFVP 513



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 120/224 (53%), Gaps = 6/224 (2%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           + +N +I   C+ G + +A  L   +  KG  P  FTY+SLI+G    G  D A  + DE
Sbjct: 647 IMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDE 706

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML   L+P+  TYN+L+   C+  N+S A  +F ++  +G++P+ ++++TLI    ++G 
Sbjct: 707 MLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGN 766

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
              A    ++M   G+ P    YTI+I+G C  G++ EA+K+ D+M+E     + +TY T
Sbjct: 767 TTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWT 826

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           ++ G  R   +     L+NEM   G+ P  +T      GH K  
Sbjct: 827 LIQGYARCGNMKAITKLYNEMHICGLLPANWT------GHVKQA 864



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 85/170 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++       ID A     EM    + P+ VTYN+LI   C+   +  A  L N +  KG
Sbjct: 687 LIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKG 746

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TYN+LI+G CK G    A ++  +M++ G+ P   TY  L+   C +  M EA 
Sbjct: 747 ISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAI 806

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           ++  +M    V P+ +++ TLI  ++R G +      + EM   GL+P N
Sbjct: 807 KLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPAN 856



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 35/67 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC    ++ A   L +M +  V P+ +TY TLI  Y R G ++   +L N M   G
Sbjct: 792 LIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICG 851

Query: 61  LKPGVFT 67
           L P  +T
Sbjct: 852 LLPANWT 858


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 269/505 (53%), Gaps = 22/505 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+   +  A+  +  +   GV  D +  NTL++ YC  G +  A  L+      G
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM---------------------GLSPD 99
           +KP + TYN+L+N  CK+G   +A+ V++E+L                        L P 
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
             T+ TL+   C+   + +   ++ +M   GV PD+V+ S+++    R+G+L  A M  R
Sbjct: 236 VVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLR 295

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           EM + GL P++V YT II+   ++G V+EA   + +M+ +G  +D+V   T+++GL +A 
Sbjct: 296 EMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAG 355

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
              EA+++F  +L+  + P+  T+T L+ GHCK G++  A  +   M ++ + P++VT++
Sbjct: 356 KSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFS 415

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           ++I+G+ K G + KA ++   M+   I PN   Y IL++GY   G    A   + EM   
Sbjct: 416 SIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSW 475

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           G++   +  + ++    RSG   +A   +  ++S+G+  D  +Y++L++G+ +E N   A
Sbjct: 476 GLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAA 535

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            ++V +M  + +  DV+ YN +  G  R G+ ++ + +  RMIE GL PD  TY +++N 
Sbjct: 536 LSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEPKSVFSRMIELGLTPDCVTYNSVMNT 594

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  Q   + A    +EM   G +P+
Sbjct: 595 YFIQGKTENALDLLNEMKSYGVMPN 619



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 248/454 (54%), Gaps = 13/454 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +   +  A+  + ++  KG+Y D   Y++L++ Y +EG    A  ++  M+ K 
Sbjct: 487 LLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKD 546

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V  YN+L  GL + G+ +  K V   M+++GL+PD  TYN+++     +     A 
Sbjct: 547 MQFDVVAYNALTKGLLRLGKYE-PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENAL 605

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   GV P++V+++ LIG   + G +++ +    EM + G VP  +++  ++  Y
Sbjct: 606 DLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAY 665

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R+      L++  ++++ G  ++ + YNT++  LCR  M  +A+ +  EM+ +G+  D 
Sbjct: 666 SRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADI 725

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G+C   ++ KA N +  M    I P+I TYN L++G    G M  A+KL ++
Sbjct: 726 VTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSE 785

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + PN  +Y IL++G+  +G+  ++ +L+ EM+ KG  PT  + N +I+ Y ++G 
Sbjct: 786 MRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGK 845

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVR---EENMDK---------AFALVSKMEN 408
             +A E L++M++ G  P+S +Y+ LI G+ +   +  MD+         A  L+ +M  
Sbjct: 846 MRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCE 905

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           +G VP   T   I + F   G+  D++ +L  +I
Sbjct: 906 KGHVPSESTLMYISSNFSAPGKRDDAKRLLKTVI 939



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 258/535 (48%), Gaps = 52/535 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   ++ A+  L +ME++ V P+ VT++++IN Y ++G L +A +++  M    
Sbjct: 382 LLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMN 441

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VF Y  L++G  + G+ + A     EM   GL  +   ++ LL    R   M EA+
Sbjct: 442 IMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQ 501

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---------------- 164
            +  ++  +G+  D+ ++S+L+  + + G    AL   +EM                   
Sbjct: 502 SLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGL 561

Query: 165 ------------------GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
                             GL PD V Y  ++N Y   G    AL + +EM   G + ++V
Sbjct: 562 LRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMV 621

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TYN ++ GLC+   + +   + +EML  G  P       L+  + +    +  L +   +
Sbjct: 622 TYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKL 681

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               +  + + YNTLI   C++G  +KAN +  +M+ + IS + ++Y  LI GYC+  HV
Sbjct: 682 VDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHV 741

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +AF  + +M+  GI P + + N +++G   +G    AD+ +S+M   G+ P++ +YN L
Sbjct: 742 EKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNIL 801

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           ++G  R  N   +  L  +M  +G +P   TYNV++  + + G+M  +  +L  M+ +G 
Sbjct: 802 VSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGR 861

Query: 447 NPDRSTYTTLINGHVS---------------QNNLKEAFRFHDEMLQRGFVPDDA 486
            P+ STY  LI G                  QN  K+  R   EM ++G VP ++
Sbjct: 862 IPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLR---EMCEKGHVPSES 913



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 261/500 (52%), Gaps = 26/500 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V++LCK   +  A  +L    +  V+ D VTYNT++  +C+ G  ++ F L++ M  KG
Sbjct: 51  LVHSLCKVGDLGLALGYL----RNSVF-DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKG 105

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     T N L+ G C+ G    A+ ++  ++  G+  D    NTL+   C    +S A 
Sbjct: 106 VCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRAL 165

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA------LMYFREMKSAG--------- 165
           ++  +  + GV PDIV+++TL+  F + G L +A      ++ FR    +G         
Sbjct: 166 DLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVET 225

Query: 166 ------LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
                 L P  V +T +I  YC++  + +   + ++M+  G + DVVT ++IL GLCR  
Sbjct: 226 WDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHG 285

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            LTEA  L  EM   G+ P+  ++TT+I    K G + +A N    M  + I  D+V   
Sbjct: 286 KLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCT 345

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           T++DG  K G+ ++A +++  ++   + PN ++Y  L++G+C +G V  A  +  +M  +
Sbjct: 346 TMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKE 405

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
            + P +V+ ++II GY + G  +KA E L KMV   + P+   Y  L++G+ R    + A
Sbjct: 406 HVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAA 465

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
                +M++ GL  + I ++++L    R G M +++ ++  ++ KG+  D   Y++L++G
Sbjct: 466 AGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDG 525

Query: 460 HVSQNNLKEAFRFHDEMLQR 479
           +  + N   A     EM ++
Sbjct: 526 YFKEGNESAALSVVQEMTEK 545



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 244/482 (50%), Gaps = 26/482 (5%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M    + P    +N L+  +   GF+ +   L + M   G+ P VF+ N L++ LCK G 
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A   L   +      D  TYNT++   C++    +   +  EM ++GV  D V+ + 
Sbjct: 61  LGLALGYLRNSV-----FDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  + + G +  A      +   G+  D +    +++GYC  G V  AL + ++  + G
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEML------ERGVF---------------PD 239
              D+VTYNT++N  C+   L +A+ + NE+L      E GV                P 
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTLI  +CK   ++   +L++ M    + PD+VT ++++ G C+ G++ +A  L  
Sbjct: 236 VVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLR 295

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M +  + PN++SY  +I+     G V EAF    +MV +GI   LV C T++ G  ++G
Sbjct: 296 EMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAG 355

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            + +A+E    ++   + P+ ++Y  L++G  +  +++ A  ++ KME + ++P+V+T++
Sbjct: 356 KSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFS 415

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            I+ G+ ++G ++ +  +L +M++  + P+   Y  L++G+      + A  F+ EM   
Sbjct: 416 SIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSW 475

Query: 480 GF 481
           G 
Sbjct: 476 GL 477



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 222/450 (49%), Gaps = 61/450 (13%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M  + L P    +N LL E      +S+ + ++ EM   GV P++ S + L+    + G 
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           L  AL Y R       V D+V Y  ++ G+C+ G   +   +  EM++KG   D VT N 
Sbjct: 61  LGLALGYLRNS-----VFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++ G C+  ++  A+ +   ++  GV  D     TL+ G+C+ G +++AL+L +   +  
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS---------------------RKISPN 309
           +KPDIVTYNTL++ FCK G++ KA  +  +++                      R + P 
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            +++  LI  YC    + + F L+ +M+  G+ P +V+C++I+ G CR G  ++A   L 
Sbjct: 236 VVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLR 295

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG------------------- 410
           +M + G+DP+ +SY T+I+  ++   + +AF   S+M  +G                   
Sbjct: 296 EMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAG 355

Query: 411 ----------------LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
                           LVP+ +TY  +L G C+ G +  +E +L +M ++ + P+  T++
Sbjct: 356 KSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFS 415

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++ING+  +  L +A     +M+Q   +P+
Sbjct: 416 SIINGYAKKGMLNKAVEVLRKMVQMNIMPN 445


>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  272 bits (695), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 146/475 (30%), Positives = 270/475 (56%), Gaps = 4/475 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ-LMNSMSGKGLKPGVFTYNS 70
           D A     EME  G+     +++ +I+  C++  + EA   L  +  G+  KP   ++N 
Sbjct: 184 DMALELFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNV 243

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++ LC  G    AK  L  ML+ GL+PD  TY+TL+   C+   + EA ++F  ++  G
Sbjct: 244 LMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEG 303

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +  + V++++LI  +   G         + M+  G+ PD V YTI+I G+C +G V E +
Sbjct: 304 MKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGM 363

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+R+++L++G  +++VTY+ +LN L +  ++ EA++L  E+   G+  D   ++ LIHG+
Sbjct: 364 KIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGY 423

Query: 251 CKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP- 308
           CK G + +AL + D+M   + + P  + + +++ G CK G + +A + + + ++ K  P 
Sbjct: 424 CKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEA-RWYLENVAVKYQPG 482

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + + Y ++I+GY  +G ++ A  L+ ++V  G+ PT+V+CN+I+ GYC+ GD   A+ + 
Sbjct: 483 DVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYF 542

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             +    + P  ++Y TL++       ++   +++ +M  +G+ P+ ITY+V++ G C++
Sbjct: 543 RAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKE 602

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            R HD+   L  M  +G+N D  TY TLI G     +++ AF  HD M+  G VP
Sbjct: 603 LRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVP 657



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/482 (31%), Positives = 257/482 (53%), Gaps = 1/482 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC    I  AK FLC M + G+ PD  TY+TLI+  C+ GFL+EA  L   ++ +G
Sbjct: 244 LMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEG 303

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K    TYNSLING    G      +++  M   G+ PD  TY  L+   C   ++ E  
Sbjct: 304 MKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGM 363

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  ++  +G+  +IV++S L+    + G +  A     E+ S GL  D + Y+I+I+GY
Sbjct: 364 KIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGY 423

Query: 181 CRNGFVLEALKMRDEM-LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G +  AL++ D M   +  V   + + +IL GLC+  +L EA      +  +    D
Sbjct: 424 CKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGD 483

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I G+ K G+++ A+ L+D +    + P IVT N+++ G+CK G+++ A   + 
Sbjct: 484 VVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFR 543

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    + P  ++Y  L++     G V     + YEMV KGIKP  ++ + +IKG C+  
Sbjct: 544 AIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKEL 603

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A  FL  M  EGV+ D ++YNTLI GF   +++  AF +  +M   G+VP  +TYN
Sbjct: 604 RFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYN 663

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++   C +G++  +E +L  + E+G+   +  YTTLI    ++    EA     ++L  
Sbjct: 664 FLINVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDD 723

Query: 480 GF 481
           GF
Sbjct: 724 GF 725



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 197/397 (49%), Gaps = 1/397 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-GK 59
           ++NAL K   +  A+  L E+   G+  D + Y+ LI+ YC+ G +E A ++ + M   +
Sbjct: 384 LLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQ 443

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P    + S++ GLCKKG    A+  L+ +       D   YN ++    +  ++S A
Sbjct: 444 KVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNA 503

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ ++   G+ P IV+ ++++  + + G L  A  YFR ++ + L+P  V YT +++ 
Sbjct: 504 VGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDA 563

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
               G V   L +  EM+EKG   + +TY+ ++ GLC+     +A    + M   GV  D
Sbjct: 564 LSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNAD 623

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G C+  ++  A ++ D M    I P  VTYN LI+  C  G++ +A  L  
Sbjct: 624 PVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLE 683

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +  R I     +Y  LI   C+ G   EA  L+ +++  G + T+   +  I   C+  
Sbjct: 684 SLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRK 743

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
            A +A  F+  M+S GV PD+  Y  L+    + + +
Sbjct: 744 FAKEAVMFIPFMLSAGVFPDTQVYYVLVRALQKRKEL 780



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 4/213 (1%)

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P  + ++ L + + +   +  A  + + M S  +  +  +Y  L+ G   +     A  L
Sbjct: 133 PSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYG---LRMTDMALEL 189

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM-VSEGVDPDSISYNTLINGFV 391
           + EM   GI  +  S + II G C+     +A  FL +    E   P  +S+N L++   
Sbjct: 190 FEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALC 249

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
               +  A + +  M   GL PD  TY+ ++ G C+ G + ++  +  R+ E+G+  +  
Sbjct: 250 NWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETV 309

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TY +LING+      +E  +    M  +G  PD
Sbjct: 310 TYNSLINGYRLLGLTREVPKIIQFMRYQGIEPD 342


>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
 gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  272 bits (695), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 260/476 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K H+   A   L EM   G  P  VTYN+LI+AY R+G L+EA +L N M+ KG
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP VFTY +L++G  + G+ + A  + +EM   G  P+  T+N  +     +   +E  
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF E++  G++PDIV+++TL+ +F +NG        F+EMK AG VP+   +  +I+ Y
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A+ +   ML+ G   D+ TYNT+L  L R  M  +++ +  EM +    P+ 
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+H +     +    +L + +    I+P  V   TL+    K   + +A + +++
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R  SP+  +   +++ Y     V +A  +   M  +G  P++ + N+++  + RS D
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K++E L +++++G+ PD ISYNT+I  + R   M  A  + S+M N G+VPDVITYN 
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            +  +       ++  ++  MI+ G  P+++TY ++++G+   N   EA  F +++
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 243/500 (48%), Gaps = 35/500 (7%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ PD  TYNTLI    R    +EA Q+   M   G      TYN+L++   K  
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A +VL+EM+  G SP   TYN+L+    R   + EA E+  +M+ +G  PD+ +++
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  F R G+++ A+  F EM++AG  P+   +   I  Y   G   E +K+ DE+   
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   D+VT+NT+L    +  M +E   +F EM   G  P+  TF TLI  + + G+  +A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + ++  M    + PD+ TYNT++    + G  E++ K+ A+M   +  PN ++Y  L++ 
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 320 YCSMGHV-----------------------------------TEAFRLWYEMVGKGIKPT 344
           Y +   +                                    EA R + E+  +G  P 
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + + N+++  Y R    +KA+  L  M   G  P   +YN+L+    R  +  K+  ++ 
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++  +G+ PD+I+YN ++  +CR  RM D+  I   M   G+ PD  TY T I  + + +
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
             +EA      M++ G  P+
Sbjct: 749 MFEEAIGVVRYMIKHGCRPN 768



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 250/520 (48%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K+ ++ SA      +++ G   D  +Y +LI+A+   G   EA  +   M   G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238

Query: 61  LKPGVFTYNSLINGLCKKGR-CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            KP + TYN ++N   K G   ++   ++++M   G++PD  TYNTL+    R     EA
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++F EM   G + D V+++ L+ ++ ++ +   A+    EM   G  P  V Y  +I+ 
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y R+G + EA++++++M EKG   DV TY T+L+G  RA  +  A  +F EM   G  P+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF   I  +   G   + + +FD +    + PDIVT+NTL+  F + G   + + ++ 
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M      P   ++  LI+ Y   G   +A  ++  M+  G+ P L + NT++    R G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD---------------------K 398
              ++++ L++M      P+ ++Y +L++ +   + +                      K
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598

Query: 399 AFALV--------------SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
              LV              S+++ +G  PD+ T N +++ + R+  +  +  +L  M E+
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G  P  +TY +L+  H    +  ++     E+L +G  PD
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 181/391 (46%), Gaps = 38/391 (9%)

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
            + ++++F   +G   +     RA  +F + K    + DN +  III+   + G V  A 
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            M + + E G  +DV +Y ++++    +    EA ++F +M E G  P   T+  +++  
Sbjct: 194 NMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF 253

Query: 251 CKDGN-MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM-EKANKLWADMISRKISP 308
            K G   NK  +L + M    I PD  TYNTLI   CK G + ++A +++ +M +   S 
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSY 312

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + ++Y  L++ Y       EA ++  EMV  G  P++V+ N++I  Y R G   +A E  
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ------------------- 409
           ++M  +G  PD  +Y TL++GF R   ++ A ++  +M N                    
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432

Query: 410 ----------------GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
                           GL PD++T+N +L  F + G   +   +   M   G  P+R T+
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TLI+ +    + ++A   +  ML  G  PD
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 158/325 (48%), Gaps = 37/325 (11%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM++ G  P+  T+NTLI+AY R G  E+A  +   M   G+ P + TYN+++  L + G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLL-------------------------------- 107
             +++++VL EM      P+  TY +LL                                
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598

Query: 108 --VESCRK-ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
             V  C K + + EAE  F E+  RG +PDI + ++++ I+ R   + +A      MK  
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  P    Y  ++  + R+    ++ ++  E+L KG   D+++YNT++   CR   + +A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +F+EM   G+ PD  T+ T I  +  D    +A+ +   M +   +P+  TYN+++DG
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778

Query: 285 FCKVGEMEKANKLWADMISRKISPN 309
           +CK+   ++A     D+  R + P+
Sbjct: 779 YCKLNRKDEAKLFVEDL--RNLDPH 801


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 260/499 (52%), Gaps = 15/499 (3%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++  C+   +    + L EME KG  P  VTY +LIN   ++G LE+   L   M  +G
Sbjct: 1188 LIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRG 1247

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P V  YNS+I+ LCK     +A  +L +M   G  PD  T+NTL+   C + ++ +AE
Sbjct: 1248 FSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 1307

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                E  RR + P+ +S++ LI  F   G+L  A     EM   G  PD V +  +I+G 
Sbjct: 1308 HFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGL 1367

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
               G V EAL +R++M E+    DV  YN +++GLC+ +ML  A ++  EMLE+ V PD 
Sbjct: 1368 VVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDE 1427

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            + + TLI G  +  N+  A  +F+ M  K I PDIV+ N +I G+C+ G M +A    ++
Sbjct: 1428 FVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSN 1487

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M      P+  +Y  +I+GY   G++  A R   +M+ +  KP +V+ +++I GYC++GD
Sbjct: 1488 MRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGD 1547

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
               A+   + M +E + P+ ++Y  LI    +++ + +A      M      P+ +T + 
Sbjct: 1548 TDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHY 1607

Query: 421  ILTGF------------CRQGRMH--DSELILWRMIEKGL-NPDRSTYTTLINGHVSQNN 465
            ++ G             C    +H  D+ L++++ +   + +P  S Y  +I      N 
Sbjct: 1608 LVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNM 1667

Query: 466  LKEAFRFHDEMLQRGFVPD 484
            L+EA  F + M ++G+VP+
Sbjct: 1668 LREALDFKNRMAKKGYVPN 1686



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 252/485 (51%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  L +  + D A+    EM  K    D  +   L+   C E  +EE  +L+ +  G G
Sbjct: 1118 LLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAG 1177

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P V  YN LI+G C++G   R   +L EM   G  P   TY +L+    +K ++ +  
Sbjct: 1178 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIG 1237

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +F EM +RG +P++  ++++I    +     +A++  ++M ++G  PD + +  +I G 
Sbjct: 1238 SLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGL 1297

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C  G V +A     E + +    + ++Y  +++G C    L  A DL  EM+ RG  PD 
Sbjct: 1298 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDV 1357

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             TF  LIHG    G +++AL + + MT++ + PD+  YN LI G CK   +  A  +  +
Sbjct: 1358 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEE 1417

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M+ + + P+   Y  LI+G+    ++ +A +++  M  KGI P +VSCN +IKGYC+ G 
Sbjct: 1418 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGM 1477

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             S+A   +S M   G  PD  +Y T+I+G+ ++ N++ A   +  M  +   P+V+TY+ 
Sbjct: 1478 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSS 1537

Query: 421  ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            ++ G+C+ G    +E +   M  + L+P+  TYT LI     ++ +  A  + + ML   
Sbjct: 1538 LINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1597

Query: 481  FVPDD 485
              P+D
Sbjct: 1598 CSPND 1602



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 245/474 (51%), Gaps = 1/474 (0%)

Query: 12   DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNS 70
            D+    L  M   G  P       L+ AY   G L +A ++   +  + G  P V   N 
Sbjct: 1058 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNR 1117

Query: 71   LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
            L+  L ++ R D A+++ DEML      D  +   L+   C +  + E  ++       G
Sbjct: 1118 LLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAG 1177

Query: 131  VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
              P +V ++ LI  + R G + R L+   EM++ G +P  V Y  +IN   + G + +  
Sbjct: 1178 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIG 1237

Query: 191  KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
             +  EM ++G   +V  YN++++ LC+ +  T+A  +  +M   G  PD  TF TLI G 
Sbjct: 1238 SLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGL 1297

Query: 251  CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
            C +G++ KA +      ++ + P+ ++Y  LI GFC  GE+  A+ L  +M+ R  +P+ 
Sbjct: 1298 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDV 1357

Query: 311  ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +++G LI+G    G V+EA  +  +M  + + P +   N +I G C+      A   L +
Sbjct: 1358 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEE 1417

Query: 371  MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
            M+ + V PD   Y TLI+GF+R EN+  A  +   ME++G+ PD+++ N ++ G+C+ G 
Sbjct: 1418 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGM 1477

Query: 431  MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M ++ L +  M + G  PD  TYTT+I+G+  Q NL  A R+  +M++R   P+
Sbjct: 1478 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPN 1531



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 230/457 (50%), Gaps = 20/457 (4%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ALCK      A + L +M   G  PD +T+NTLI   C EG + +A   +     + 
Sbjct: 1258 VIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 1317

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            L P   +Y  LI+G C +G    A ++L EM+  G +PD  T+  L+        +SEA 
Sbjct: 1318 LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 1377

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  +M+ R V PD+  ++ LI    +   L  A     EM    + PD  +Y  +I+G+
Sbjct: 1378 IVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGF 1437

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             R+  + +A K+ + M  KG   D+V+ N ++ G C+  M++EA    + M + G  PD 
Sbjct: 1438 IRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDE 1497

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +T+TT+I G+ K GN+N AL     M ++  KP++VTY++LI+G+CK G+ + A  L+A+
Sbjct: 1498 FTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFAN 1557

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY----- 355
            M +  +SPN ++Y ILI        V  A   +  M+     P  V+ + ++ G      
Sbjct: 1558 MQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTP 1617

Query: 356  -------CRSGDASKADEFL---SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
                   C + +    D  L    K+V +  DP + +YN +I    R   + +A    ++
Sbjct: 1618 CVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNR 1677

Query: 406  MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
            M  +G VP+ IT+  +L GFC  G+      + WR I
Sbjct: 1678 MAKKGYVPNPITFLSLLYGFCSVGKS-----VNWRTI 1709



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 11/132 (8%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVY----PDTVTYNTLINAYCREGFLEEAFQLMNSM 56
            ++N++C +      K  L  + +K V+    P    YN +I + CR   L EA    N M
Sbjct: 1619 VINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRM 1678

Query: 57   SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            + KG  P   T+ SL+ G C  G+    + +L    Q         Y  L        + 
Sbjct: 1679 AKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEIIFRYKFLF-------DQ 1731

Query: 117  SEAEEIFCEMSR 128
               E + CE+SR
Sbjct: 1732 YATESVCCEVSR 1743


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 144/455 (31%), Positives = 250/455 (54%), Gaps = 16/455 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M   G+  D  T N L+N  C    L E F     +  +G  P + TYN+LI GLC + 
Sbjct: 94  QMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEH 153

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA----EEIFCEMSRRGV--AP 133
           R   A  +   M ++G +PD  TY TL+   C   N++ A    +E+  ++SR  +   P
Sbjct: 154 RISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKP 213

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP----------DNVLYTIIINGYCRN 183
           ++++++ ++    + G+ D A   F EMK+ G++P          D V + ++I+  C+ 
Sbjct: 214 NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKE 273

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G V+EA K+   M+E G V D+VTYN+++ G C    L  A +LF  M  +G  PD  ++
Sbjct: 274 GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 333

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
             LI+G+ K   + +A+ L++ M     +P+++TY++L+ G    G+++ A KL++ M +
Sbjct: 334 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 393

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             I+ N  +YGI ++G C    + EA +L+ E+     K  + + N +I G C++G    
Sbjct: 394 HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLET 453

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E   K+ +EG +P+ ++Y  +I+GF RE  +DKA  L+ KME  G  PD+ITYN ++ 
Sbjct: 454 AWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMR 513

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           GF    ++ +   +L RM +K ++PD  T + +++
Sbjct: 514 GFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVD 548



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 243/473 (51%), Gaps = 16/473 (3%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   ++N L++   +     + F L N M   GL     T N L+N LC   R       
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              +L+ G SP+  TYNTL+   C +  +SEA  +F  M + G  PD+V++ TLI     
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 148 NGQLDRALMYFREMKS------AGLVPDNVLYTIIINGYCRNGFVLEALKM--------- 192
            G ++ AL   +EM +          P+ + Y II++G C+ G   EA ++         
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 193 -RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
             +EML++G   D+VT+N +++ LC+   + EA  L   M+E G+ PD  T+ +LI G C
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
             G++N A  LF  M  K  +PD+++YN LI+G+ K  ++E+A KL+ +M+     PN I
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  L+ G    G V +A +L+  M   GI     +    + G C++    +A +  +++
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            S     +  + N LI+G  +   ++ A+ L  K+ N+G  P+V+TY +++ GFCR+G++
Sbjct: 427 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             + +++ +M   G  PD  TY TL+ G    N L+E  +    M Q+   PD
Sbjct: 487 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 539



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 228/425 (53%), Gaps = 16/425 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           ++  LC +H+I  A      M++ G  PD VTY TLI   C  G +  A +L   M    
Sbjct: 145 LIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDI 204

Query: 60  -----GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM----------LQMGLSPDTATYN 104
                  KP V TYN +++GLCK GR D AK++ +EM          L  GL PD  T+N
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFN 264

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C++  + EA+++   M   G+ PD+V++++LI  F   G L+ A   F  M S 
Sbjct: 265 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 324

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  PD + Y ++INGY +   V EA+K+ +EML  G   +V+TY+++L G+  A  + +A
Sbjct: 325 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 384

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             LF+ M   G+  + YT+   + G CK+  + +A+ LF  +   + K +I   N LIDG
Sbjct: 385 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 444

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CK G++E A +L+  + +    PN ++Y I+I+G+C  G V +A  L  +M   G  P 
Sbjct: 445 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 504

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           +++ NT+++G+  S    +  + L +M  + V PD+I+ + +++   ++E   +   L+ 
Sbjct: 505 IITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLP 564

Query: 405 KMENQ 409
           +   Q
Sbjct: 565 RFPIQ 569



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 238/464 (51%), Gaps = 17/464 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC  +++         + ++G  P+ VTYNTLI   C E  + EA +L   M   G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML------QMGLSPDTATYNTLLVESCRKE 114
             P V TY +LI GLC  G  + A ++  EML      ++   P+  TYN ++   C+  
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 115 NMSEAEEIFCEMSR----------RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
              EA+++F EM            +G+ PD+V+F+ LI    + G++  A      M  +
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G+VPD V Y  +I G+C  G +  A ++   M  KGC  DV++YN ++NG  +   + EA
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 349

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             L+NEML  G  P+  T+ +L+ G    G ++ A  LF +M    I  +  TY   +DG
Sbjct: 350 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 409

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CK   + +A KL+ ++ S        +   LI+G C  G +  A+ L+ ++  +G +P 
Sbjct: 410 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 469

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           +V+   +I G+CR G   KA+  + KM + G  PD I+YNTL+ GF     +++   L+ 
Sbjct: 470 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 529

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM-IEKGLN 447
           +M  + + PD IT ++++    +  +  +   +L R  I+KG++
Sbjct: 530 RMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVD 573



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 204/402 (50%), Gaps = 18/402 (4%)

Query: 98  PDTATYNTLLVESCRKENMS--EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           P         +  C+  N++   A   F  M R    P + SF+ L+   ++     +  
Sbjct: 30  PSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVF 89

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
             + +M+ +GL  D     I++N  C    + E       +L +G   ++VTYNT++ GL
Sbjct: 90  SLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGL 149

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT------QK 269
           C    ++EA  LF  M + G  PD  T+ TLI G C  GN+N AL L   M       + 
Sbjct: 150 CMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEI 209

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWA----------DMISRKISPNYISYGILING 319
           + KP+++TYN ++DG CKVG  ++A +L+           +M+ + + P+ +++ +LI+ 
Sbjct: 210 NCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDT 269

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G V EA +L   M+  GI P LV+ N++I+G+C  GD + A E    M S+G +PD
Sbjct: 270 LCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPD 329

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            ISYN LING+ +   +++A  L ++M   G  P+VITY+ +L G    G++ D++ +  
Sbjct: 330 VISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFS 389

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            M   G+  +  TY   ++G    + L EA +   E+    F
Sbjct: 390 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF 431



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 8/233 (3%)

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL--WADMISRKISPNYISYGILIN 318
           NL  + T  S  P            CK G +   + L  +  M+    +P+  S+  L++
Sbjct: 18  NLSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLS 77

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G   + H ++ F L+ +M   G+     + N ++   C      +     + ++  G  P
Sbjct: 78  GLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSP 137

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG------RMH 432
           + ++YNTLI G   E  + +A  L  +M+  G  PDV+TY  ++ G C  G      ++H
Sbjct: 138 NIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLH 197

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
              L      E    P+  TY  +++G        EA +  +EM  +G +P++
Sbjct: 198 QEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNE 250


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 259/474 (54%), Gaps = 8/474 (1%)

Query: 16  MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL 75
           + L E+  +G+ PD V  NT++   C       A  L + M+  G      TY +LI+ L
Sbjct: 32  LLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHT-TYYNLIHPL 90

Query: 76  CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           CK    D A  +L +M   G++P T  +N ++   CR   +  A  ++ +M+     PD 
Sbjct: 91  CKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDF 149

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           ++++ L+   S+ G+L  A+   +EM SA  VPDN   T+++   C    V +A ++ +E
Sbjct: 150 LTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEE 209

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADD-LFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           ML +G   + +TY+ +++GLC+ + L EA   L  E+  RG  PD  T++T+I G CK G
Sbjct: 210 MLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG 269

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            +  A+++F+ M   S  P  +TYN+LI G+C+ G+M++A +L   M+    +P+ I+Y 
Sbjct: 270 RLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYT 326

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            L++ +C MG + +A+ L+ +MV   + P +V+  +++ G C  G    A E L ++   
Sbjct: 327 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 386

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G  P   +YN +++G+ +   + KA  LV+   ++G VP+ +TYN+++ G CR GR   +
Sbjct: 387 GCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 446

Query: 435 ELILWRM-IEKGLNPDR-STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              L ++  E G  P   + Y  +++         +A +F++EM+QRG+VP  A
Sbjct: 447 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAA 500



 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 251/482 (52%), Gaps = 8/482 (1%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC      +A     +M + G    T  YN LI+  C+   L+EA  L+  M  +G+ PG
Sbjct: 56  LCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPG 114

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
              +N +I GLC+ GR   A  V  +M      PD  TY  L+    +   + +A ++  
Sbjct: 115 TLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQ 173

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM      PD  + + ++       ++D A     EM   G+  + + Y+ +++G C+  
Sbjct: 174 EMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCE 233

Query: 185 FVLEALK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
            + EA+  +  E+  +G   D+VTY+T+++GLC+A  L +A D+F EM      P   T+
Sbjct: 234 RLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITY 290

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +LI G+C+ G+M++A+ L   M   +  PD++TY TL+  FCK+G ++ A +L+  M++
Sbjct: 291 NSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVA 350

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
            K+SP+ +++  L++G C  G + +A  L  E+  +G  PT+ + N ++ GYC+S    K
Sbjct: 351 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRK 410

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG--LVPDVITYNVI 421
           A+E ++   S G  P++++YN L+ G  R    D+A   + ++ ++G      V  Y +I
Sbjct: 411 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAII 470

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L   CR GR  D+      MI++G  P  +T+ T++      +  ++A    +EM++ G 
Sbjct: 471 LDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGH 530

Query: 482 VP 483
            P
Sbjct: 531 TP 532



 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 244/479 (50%), Gaps = 7/479 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A   L +M+ +G+ P T+ +N +I   CR G L  A  +   M+   
Sbjct: 86  LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DA 144

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY  L++GL K GR   A +VL EM+     PD  T   ++   C  + + +A 
Sbjct: 145 HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAR 204

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIING 179
           E+  EM  RG+A + +++S L+    +  +LD A+ +   E+   G  PD V Y+ +I+G
Sbjct: 205 ELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDG 264

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G + +A+ + +EM    C    +TYN+++ G CRA  + EA  L  +M++    PD
Sbjct: 265 LCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPD 321

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTL+   CK G ++ A  LF  M    + PD+VT+ +L+DG C  G ME A +L  
Sbjct: 322 VITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 381

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           ++  R   P   +Y  +++GYC    V +A  L  +   +G  P  V+ N ++ G CR+G
Sbjct: 382 EITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAG 441

Query: 360 DASKADEFLSKMVSEGVD-PDSIS-YNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
              +A ++L ++ SEG   P S++ Y  +++   R+   D A     +M  +G VP   T
Sbjct: 442 RTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 501

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +  ++   C+  +   +  +L  MI+ G  P   T   +++ +     +++A     E+
Sbjct: 502 FATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 145/448 (32%), Positives = 237/448 (52%), Gaps = 8/448 (1%)

Query: 35  TLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            LI   C  G   +A +++ + SG    P V  YN+++ G C  G+ D A+ ++ +M   
Sbjct: 109 ALIKKLCASGRTADARRVL-AASG----PDVMVYNAMVAGYCGAGQLDAARRLVADM--- 160

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
            + PD  TYNTL+   C +   S A  +  +M RRG  PD+V+++ L+    +     +A
Sbjct: 161 PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQA 220

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
           +    EM   G  PD V Y +++NG C+ G V +A++    +   GC  + V+YN +L G
Sbjct: 221 MKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKG 280

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           L  A+   +A+ L  EM  +G  P+  TF  LI   C+ G +  A+ + + M Q    P+
Sbjct: 281 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPN 340

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
            ++YN L+  FCK  ++ KA +    M+SR   P+ +SY  L+   C  G V  A  L +
Sbjct: 341 SLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLH 400

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           ++  KG  P L+S NT+I G  ++G   +A E L +M S+G+ PD I+Y+T+ +G  RE+
Sbjct: 401 QLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRED 460

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            +++A     K+++ G+ P    YN IL G C++   H++  +   MI  G  P+ STYT
Sbjct: 461 RIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYT 520

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            L+ G   +  +KEA     ++  RG V
Sbjct: 521 ILVEGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 236/446 (52%), Gaps = 8/446 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +   A+  L         PD + YN ++  YC  G L+ A +L+  M    
Sbjct: 110 LIKKLCASGRTADARRVL-----AASGPDVMVYNAMVAGYCGAGQLDAARRLVADMP--- 161

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  +TYN+LI GLC +GR   A  VL++M + G  PD  TY  LL  +C++    +A 
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  +G APDIV+++ ++    + G+++ A+ + + + S G  P+ V Y I++ G 
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                  +A K+ +EM  KGC  +VVT+N +++ LCR  ++  A ++  +M + G  P+ 
Sbjct: 282 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNS 341

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  L+H  CK   ++KA+   ++M  +   PDIV+YNTL+   C+ GE++ A +L   
Sbjct: 342 LSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQ 401

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  SP  ISY  +I+G    G   EA  L  EM  KG++P +++ +TI  G CR   
Sbjct: 402 LKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDR 461

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     K+   G+ P +  YN ++ G  +      A  L + M + G +P+  TY +
Sbjct: 462 IEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTI 521

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           ++ G   +G + ++  +  ++  +G+
Sbjct: 522 LVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 221/413 (53%), Gaps = 5/413 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV   C   ++D+A+  + +M    V PD  TYNTLI   C  G    A  ++  M  +G
Sbjct: 140 MVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRG 196

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  L+   CK+    +A ++LDEM   G +PD  TYN +L   C++  + +A 
Sbjct: 197 CLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAM 256

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E    +   G  P+ VS++ ++ G+F+   + + A     EM   G  P+ V + ++I+ 
Sbjct: 257 EFLKNLPSYGCEPNTVSYNIVLKGLFTAE-RWEDAEKLMEEMAHKGCPPNVVTFNMLISF 315

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR G V  A+++ ++M + GC  + ++YN +L+  C+ K + +A +    M+ RG +PD
Sbjct: 316 LCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPD 375

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++ TL+   C++G ++ A+ L   +  K   P +++YNT+IDG  K G+ ++A +L  
Sbjct: 376 IVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLD 435

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M S+ + P+ I+Y  + +G C    + EA R + ++   GI+PT    N I+ G C+  
Sbjct: 436 EMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRR 495

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
           +   A +  + M+S G  P+  +Y  L+ G   E  + +A  L +++ ++G+V
Sbjct: 496 ETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 154/486 (31%), Positives = 255/486 (52%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC++ +   A   L EM +  + PD  +YNT+I  +C    LE+A +L N M G G
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               + T+  LI+  CK G+ D A   L EM  MGL  D   Y +L+   C    +   +
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E+  RG +P  ++++TLI  F + GQL  A   F  M   G+ P+   YT +I+G 
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EAL+  + M+EK    + VTYN I+N LC+  ++ +A ++   M +R   PD 
Sbjct: 328 CGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKS--IKPDIVTYNTLIDGFCKVGEMEKANKLW 298
            T+  L+ G C  G++++A  L  +M + S    PD+++YN LI G CK   + +A  ++
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             ++ +  + + ++  IL+N     G V +A  LW ++    I     +   +I G+C++
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  + A   L KM    + P    YN L++   +E ++D+A+ L  +M+     PDV+++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N+++ G  + G +  +E +L  M   GL+PD  TY+ LIN  +    L EA  F D+M+ 
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627

Query: 479 RGFVPD 484
            GF PD
Sbjct: 628 SGFEPD 633



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 252/486 (51%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  +++ A     EM+  G     VT+  LI+A+C+ G ++EA   +  M   G
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  +  Y SLI G C  G  DR K + DE+L+ G SP   TYNTL+   C+   + EA 
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF  M  RGV P++ +++ LI      G+   AL     M      P+ V Y IIIN  
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKL 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF--P 238
           C++G V +A+++ + M ++    D +TYN +L GLC    L EA  L   ML+   +  P
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  ++  LIHG CK+  +++AL+++D++ +K    D VT N L++   K G++ KA +LW
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             +   KI  N  +Y  +I+G+C  G +  A  L  +M    ++P++   N ++   C+ 
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A     +M  +   PD +S+N +I+G ++  ++  A +L+  M   GL PD+ TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++  F + G + ++     +M++ G  PD     +++   +SQ    +      +++ 
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662

Query: 479 RGFVPD 484
           +  V D
Sbjct: 663 KDIVLD 668



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 202/398 (50%), Gaps = 3/398 (0%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A  V  + +  G S   A  N L+ +  R  N   A   + +M       + VS S L+ 
Sbjct: 57  AVSVFQQAVDSGSSLAFAGSN-LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLE 115

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            + +  +   A      M   G   +   + I++ G CRN    +A+ +  EM     + 
Sbjct: 116 CYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP 175

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           DV +YNT++ G C  K L +A +L NEM   G      T+  LI   CK G M++A+   
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M    ++ D+V Y +LI GFC  GE+++   L+ +++ R  SP  I+Y  LI G+C +
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G + EA  ++  M+ +G++P + +   +I G C  G   +A + L+ M+ +  +P++++Y
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTY 355

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N +IN   ++  +  A  +V  M+ +   PD ITYN++L G C +G + ++  +L+ M++
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415

Query: 444 KG--LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
                +PD  +Y  LI+G   +N L +A   +D ++++
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 152/297 (51%)

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A     +MLE    ++ V+ + +L    + +    A  +   ML+RG   + Y    L+ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G C++    KA++L   M + S+ PD+ +YNT+I GFC+  E+EKA +L  +M     S 
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + +++GILI+ +C  G + EA     EM   G++  LV   ++I+G+C  G+  +     
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +++  G  P +I+YNTLI GF +   + +A  +   M  +G+ P+V TY  ++ G C  
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G+  ++   L  MIEK   P+  TY  +IN       + +A    + M +R   PD+
Sbjct: 331 GKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 141/276 (51%)

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           + ++  L R++    A   + +MLE   F +F + + L+  + +      A  +  +M +
Sbjct: 76  SNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           +    ++  +N L+ G C+  E  KA  L  +M    + P+  SY  +I G+C    + +
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  EM G G   +LV+   +I  +C++G   +A  FL +M   G++ D + Y +LI 
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           GF     +D+  AL  ++  +G  P  ITYN ++ GFC+ G++ ++  I   MIE+G+ P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  TYT LI+G       KEA +  + M+++   P+
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPN 351


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 268/484 (55%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++A   +  +D A   L  M++    P  VTY TL++   + G L+EA  L+  M  +G
Sbjct: 534  LMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             +P V TY+SL+    K+ + + +  + DEM++ G   D +TY+ ++   C+ +++ +A 
Sbjct: 594  CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQAL 653

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++F  M   G+ P + ++ TL+    ++ ++D AL  F E++ + LVPD  +Y I++NG 
Sbjct: 654  DVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             ++  V EA K+ D M  +  + D+ TY ++L+GL ++  L EA ++F +M E G  PD 
Sbjct: 714  VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDV 773

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
              +T+L+    K G ++ AL +F  M +K   PD+VTY++LID   K G +E+A   + +
Sbjct: 774  VAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFEN 833

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
             IS+  +PN   Y  LI+ +   G V  A  L+ EM  +   P +V+ N ++ G  ++G 
Sbjct: 834  SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGR 893

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             + A++ L +M   G  PD ++YN LI+G  +   +D+A +   +M+ +G+VPDVIT+  
Sbjct: 894  LNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTS 953

Query: 421  ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            ++    +  ++ ++  +   M E+G NP   TY  LI+       + EA     EM  +G
Sbjct: 954  LIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKG 1013

Query: 481  FVPD 484
             +PD
Sbjct: 1014 CMPD 1017



 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 248/453 (54%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           +TYNTL++A+   G ++EA +L+  M      P V TY +L++GL K GR D A  +L E
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M + G  P   TY++L+    +++   E+  +F EM R+G   D+ ++S +I    ++  
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D+AL  F  MK  G+ P    Y  +++   ++  +  AL++ +E+ E   V D   YN 
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++NGL ++  + EA  L + M  + + PD +T+T+L+ G  K G + +A N+F  MT++ 
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            +PD+V Y +L+D   K G++  A  ++  M  ++  P+ ++Y  LI+     G V EA+
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
             +   + KG  P +   +++I  + + G   +A E   +M      P+ ++YN L++G 
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +   ++ A  L+ +ME  G VPD++TYN+++ G  + G + ++E    RM EKG+ PD 
Sbjct: 889 AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDV 948

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            T+T+LI      + L EA    D M + G+ P
Sbjct: 949 ITFTSLIESLGKVDKLLEACELFDSMEEEGYNP 981



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 271/550 (49%), Gaps = 66/550 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  + D A     EM+ +G+ P+  TYN +I+   + G   EA+QL + +  +G
Sbjct: 398 LIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQG 457

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG----LSPDT---------------- 100
             P VFTYN+LI+ L K G+ D+   ++ EM++ G    +S D+                
Sbjct: 458 AVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVE 517

Query: 101 -----------ATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
                       TYNTL+       ++ EA ++   M +    P +V+++TL+    + G
Sbjct: 518 YPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAG 577

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           +LD A+   REM+  G  P  V Y+ ++  + +     E+L + DEM+ KGCV DV TY+
Sbjct: 578 RLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYS 637

Query: 210 TILNGLCRAKMLTEADD-----------------------------------LFNEMLER 234
            ++N LC++  + +A D                                   +FNE+ E 
Sbjct: 638 LVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQES 697

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            + PD + +  +++G  K   +++A  L D M  ++I PD+ TY +L+DG  K G +E+A
Sbjct: 698 SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEA 757

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             ++  M      P+ ++Y  L++     G ++ A  ++  M  K   P +V+ +++I  
Sbjct: 758 FNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDS 817

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             + G   +A  F    +S+G  P+   Y++LI+ F ++  +D+A  L  +M+ +   P+
Sbjct: 818 LGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           ++TYN +L+G  + GR++ +E +L  M + G  PD  TY  LI+G      + EA  +  
Sbjct: 878 IVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFK 937

Query: 475 EMLQRGFVPD 484
            M ++G VPD
Sbjct: 938 RMKEKGIVPD 947



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 240/515 (46%), Gaps = 31/515 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L    + D+    L  M ++G         +L+  +     +  A ++ N M   G
Sbjct: 188 MIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFG 247

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    YN ++  L K G    A  V  ++ Q  + PD  T+   +    R   +  A 
Sbjct: 248 CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAA 307

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   EM + G+ P + +F+ LI    ++G +D A  +F  MK+    P+ V YT ++NG 
Sbjct: 308 EPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGL 367

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA ++  EM E  C  D + YNT+++GL +A     A  LF EM +RG+ P+ 
Sbjct: 368 AKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNL 427

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I    K G   +A  LF  + ++   PD+ TYNTLID   K G+M+K   +  +
Sbjct: 428 RTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKE 487

Query: 301 M--------ISRKISPNY-----------------------ISYGILINGYCSMGHVTEA 329
           M        ISR  +  +                       I+Y  L++ +   GHV EA
Sbjct: 488 MVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEA 547

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            +L   M      PT+V+  T++ G  ++G   +A   L +M  +G +P  ++Y++L+  
Sbjct: 548 VKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMAS 607

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           F + +  +++ +L  +M  +G V DV TY++++   C+   +  +  +  RM E+G+ P 
Sbjct: 608 FYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPL 667

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              Y TL++  V    +  A +  +E+ +   VPD
Sbjct: 668 LGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPD 702



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 226/456 (49%), Gaps = 35/456 (7%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V+ L K  ++D A   L EME++G  P  VTY++L+ ++ +    EE+  L + M  KG
Sbjct: 569  LVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG 628

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                V TY+ +IN LCK    D+A +V   M + G+ P    Y TLL    + E +  A 
Sbjct: 629  CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFAL 688

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +IF E+    + PD   ++ ++    ++ ++D A      MK+  ++PD   YT +++G 
Sbjct: 689  QIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748

Query: 181  CRNGFVLEALKMRDEMLEKG-----------------------------------CVMDV 205
             ++G + EA  M  +M E+G                                   CV DV
Sbjct: 749  GKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDV 808

Query: 206  VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            VTY+++++ L +   + EA   F   + +G  P+   +++LI    K G +++AL LF+ 
Sbjct: 809  VTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEE 868

Query: 266  MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
            M ++   P+IVTYN L+ G  K G +  A KL  +M      P+ ++Y ILI+G   MG 
Sbjct: 869  MQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGM 928

Query: 326  VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
            V EA   +  M  KGI P +++  ++I+   +     +A E    M  EG +P  ++YN 
Sbjct: 929  VDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNV 988

Query: 386  LINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            LI+   R   + +A  +  +M+ +G +PD IT  ++
Sbjct: 989  LIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 187/422 (44%), Gaps = 31/422 (7%)

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           Q G S    TY  ++      +      +I   M + G    +   ++L+  F     + 
Sbjct: 175 QDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVS 234

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            AL  F +MKS G  P   +Y  ++    + GF   A+ +  ++ +     D  T+   +
Sbjct: 235 GALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFV 294

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           +   R+  L  A +   EM++ G+ P  +TFT LI    K GN+++A   F+ M      
Sbjct: 295 HSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCS 354

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P++VTY TL++G  K G +E+A +++ +M     SP+ I+Y  LI+G    G    A  L
Sbjct: 355 PNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGL 414

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + EM  +G+ P L + N +I    ++G   +A +    +  +G  PD  +YNTLI+   +
Sbjct: 415 FKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGK 474

Query: 393 EENMDKAFALVSKMENQG------------------------LVPDV-------ITYNVI 421
              MDK  A++ +M  +G                          P +       ITYN +
Sbjct: 475 GGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTL 534

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           ++ F   G + ++  +L  M +    P   TYTTL++G      L EA     EM ++G 
Sbjct: 535 MSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGC 594

Query: 482 VP 483
            P
Sbjct: 595 EP 596



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 79/155 (50%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ L K  +++ A+  L EME+ G  PD VTYN LI+   + G ++EA      M  KG
Sbjct: 884  LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            + P V T+ SLI  L K  +   A E+ D M + G +P   TYN L+    R   + EA 
Sbjct: 944  IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAA 1003

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
             IF EM  +G  PD ++   +  I S   Q   AL
Sbjct: 1004 MIFHEMKVKGCMPDGITIGIMKRILSVREQQFHAL 1038


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 151/463 (32%), Positives = 247/463 (53%), Gaps = 19/463 (4%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +N +++++ +         L   +  K ++P  FT N LIN  C  G+ + A  V
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L+ G  PDT T  TL+   C K  + +A     ++  +G   D VS+ TLI    +
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+   A+   R +      P+ V+Y  II+  C+   V EA  +  EM  KG   +VVT
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+ I++G C    LTEA    NEM+ + + PD Y + TL+    K+G + +A N+  ++ 
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIV 300

Query: 268 QKSIKPDIVTYNTLIDGFCK-----VGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           +  +KP+++TYNTLIDG+ K     VG M              ++P+  SY I+IN  C 
Sbjct: 301 KTCLKPNVITYNTLIDGYAKHVFNAVGLM-------------GVTPDVWSYNIMINRLCK 347

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +  V EA  L+ EM  K + P  V+ N++I G C+SG  S A + + +M   G   + I+
Sbjct: 348 IKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVIT 407

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF-CRQGRMHDSELILWRM 441
           YN+LING  +   +DKA AL++KM++QG+ PD+ T N++L G  C+  R+ +++ +   +
Sbjct: 408 YNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDL 467

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++KG +P+  TY  +I GH  +  L EA+    +M   G  P+
Sbjct: 468 LDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPN 510



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/447 (31%), Positives = 243/447 (54%), Gaps = 9/447 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I+ A   L ++ + G  PDTVT  TLI   C +G +++A    + +  +G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +LING+CK G    A ++L  +      P+   YNT++   C+++ +SEA 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EMS +G++ ++V++S +I  F   G+L  AL +  EM    + PD  +Y  +++  
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V EA  +   +++     +V+TYNT+++G         A  +FN +   GV PD 
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDV 335

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  +I+  CK   + +ALNL+  M QK++ P+ VTYN+LIDG CK G +  A  L  +
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDE 395

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG-YCRSG 359
           M  R    N I+Y  LING C  G + +A  L  +M  +GI+P + + N ++ G  C+  
Sbjct: 396 MHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGK 455

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A      ++ +G  P+  +YN +I G  +E  +D+A+AL SKME+ G  P+ IT+ 
Sbjct: 456 RLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFK 515

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGL 446
           +I+     +G    +E +L  MI +GL
Sbjct: 516 IIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 247/464 (53%), Gaps = 9/464 (1%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            +E K + PD  T N LIN +C  G +  AF +++ +   G +P   T  +LI GLC KG
Sbjct: 88  RLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKG 147

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A    D++L  G   D  +Y TL+   C+      A ++   +  R   P++V ++
Sbjct: 148 QVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYN 207

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    +   +  A   F EM   G+  + V Y+ II+G+C  G + EAL   +EM+ K
Sbjct: 208 TIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLK 267

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               DV  YNT+++ L +   + EA ++   +++  + P+  T+ TLI G+ K       
Sbjct: 268 AINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK------- 320

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            ++F+ +    + PD+ +YN +I+  CK+  +E+A  L+ +M  + + PN ++Y  LI+G
Sbjct: 321 -HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDG 379

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G ++ A+ L  EM  +G    +++ N++I G C++G   KA   ++KM  +G+ PD
Sbjct: 380 LCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPD 439

Query: 380 SISYNTLINGFV-REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
             + N L++G + + + +  A  L   + ++G  P+V TYN+I+ G C++G + ++  + 
Sbjct: 440 MYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQ 499

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            +M + G +P+  T+  +I   + +    +A +   EM+ RG +
Sbjct: 500 SKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 166/334 (49%), Gaps = 8/334 (2%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D AL  F  M      P  + +  I++ + +       + +   +  K    D  T N 
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++N  C    +  A  + +++L+ G  PD  T TTLI G C  G + KAL+  D +  + 
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            + D V+Y TLI+G CK+GE   A +L   +  R   PN + Y  +I+  C    V+EA 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L+ EM  KGI   +V+ + II G+C  G  ++A  FL++MV + ++PD   YNTL++  
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +E  + +A  +++ +    L P+VITYN ++ G+ +         +   +   G+ PD 
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH--------VFNAVGLMGVTPDV 335

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +Y  +IN       ++EA   + EM Q+  VP+
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPN 369



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 67/138 (48%)

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
           S  +V +A   ++ M+     P ++  N I+  + +            ++  + + PD  
Sbjct: 40  SFENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFF 99

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           + N LIN F     ++ AF+++SK+   G  PD +T   ++ G C +G++  +     ++
Sbjct: 100 TLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKL 159

Query: 442 IEKGLNPDRSTYTTLING 459
           + +G   D+ +Y TLING
Sbjct: 160 LAQGFRLDQVSYGTLING 177


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 247/468 (52%), Gaps = 2/468 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  K   PD +    LI  +     +++A ++M  +   G KP VF YN++I+G CK  R
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR-RGVAPDIVSFS 139
            + AK VLD M + G SPD  T+N ++   C K  +  A ++F E+ +     P +++++
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI  +   G +D AL    EM S GL PD   Y +I  G C+ G V  A +    +  +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           GC  DV+TYN +L  L       E +   +E+  RG  P+  T++ LI   C+DG + ++
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           +NL  +M +K + PD   Y+ LI  FC+ G+++ A +    MI     P+ ++Y  ++  
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G+   A  ++ ++   G  P + S NT++     SGD  +A   +S+M+S+G+DPD
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+YN+LI+   R+  +D+A  L++ M +    P++++Y  +L G C+  R+ D+  +L 
Sbjct: 360 VITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLA 419

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            MIE G  P+ +TYT LI G     +  +A    + +     + +D+F
Sbjct: 420 AMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISEDSF 467



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 213/407 (52%), Gaps = 1/407 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS-MSGK 59
           +++  CK ++I+SAK  L  M++KG  PD VT+N +I  +C +G ++ A ++    +   
Sbjct: 50  VISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDN 109

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             KP + TY  LI     +G  D A ++LDEML  GL PDT TYN +    C++  +  A
Sbjct: 110 NCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRA 169

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E    ++ RG  PD+++++ L+      G+ D    +  E+ S G  P+ V Y+I+I+ 
Sbjct: 170 FEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISS 229

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR+G + E++ +   M EKG   D   Y+ ++   CR   L  A +  + M+  G  PD
Sbjct: 230 LCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPD 289

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              + T++   CK+GN + A+ +F  + +    P++ +YNT++      G+  +A  + +
Sbjct: 290 IVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMIS 349

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+S+ I P+ I+Y  LI+  C  G V EA  L  +M+    +P +VS  T++ G C++ 
Sbjct: 350 QMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAH 409

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
               A E L+ M+  G  P+  +Y  LI G     +  +A  L + +
Sbjct: 410 RIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 166/552 (30%), Positives = 274/552 (49%), Gaps = 71/552 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC +  +  A   L +ME+ G  P  VTYNTL+N YC++G  + A +L++ M  KG
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 298

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V TYN  I+ LC   R  +A  +L +M +  +SP+  TYNTL+    ++  +  A 
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV------------- 167
           ++F EMS+  ++P+ V+++ LIG     G  + AL     M++AGL              
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKV 418

Query: 168 ----------PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
                      D+    ++++  CR+G + EA K    M   G V + +TY+ I+NG   
Sbjct: 419 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGS 478

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHG---------------------------- 249
                 A   F++M++ G  P F+T+ +L+ G                            
Sbjct: 479 IGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM 538

Query: 250 -------HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
                   CK GN+++A+ LFD M Q ++ PD  TY++L+ G C+ G+   A  L+   +
Sbjct: 539 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 598

Query: 303 SR-KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            R  + PN++ Y  L++G    GH   AF  + EM+ KG  P  V+ N II    R G  
Sbjct: 599 GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQM 658

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            KA++F S M   GV P+  +YN L++GF +++ + +  +L S M  +G+ PD +T++ +
Sbjct: 659 MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 718

Query: 422 LTGFCRQG------------RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           + G  + G             M +S ++L  M+E G+ P  + Y TLING     +++ A
Sbjct: 719 ILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 778

Query: 470 FRFHDEMLQRGF 481
           F+  DEM   GF
Sbjct: 779 FKLKDEMEALGF 790



 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 153/495 (30%), Positives = 257/495 (51%), Gaps = 13/495 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V++LC+D K+  A+ FLC M + G+ P+++TY+ +IN Y   G    AF   + M   G
Sbjct: 437 LVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 496

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY SL+ GLCK G    AK+ L+ +  +  + D+  YNTLL E+C+  N+ EA 
Sbjct: 497 QHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAV 556

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF-REMKSAGLVPDNVLYTIIING 179
            +F +M +  V PD  ++S+L+    R G+   A+  F   M    L P++V+YT +++G
Sbjct: 557 ALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDG 616

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G    A    +EM++KG   D V +N I++   R   + +A+D F+ M   GV P+
Sbjct: 617 LSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 676

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG---------- 289
             T+  L+HG  K   + + L+L+  M ++ I PD +T+++LI G  K G          
Sbjct: 677 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 736

Query: 290 --EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
              ME++  +  +M+   + P +  Y  LING C +G +  AF+L  EM   G     V+
Sbjct: 737 KMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVA 796

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            + +++G    G    A   L  M+   + P   ++ TL++ F R+  + +A  L   ME
Sbjct: 797 ESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 856

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             GL  DV+ YNV++ G C  G    +  +   M  + L P+ +TY  L++   + NNL 
Sbjct: 857 LCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLI 916

Query: 468 EAFRFHDEMLQRGFV 482
           +  +   ++ +RG +
Sbjct: 917 QGEKLLTDLQERGLI 931



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 230/481 (47%), Gaps = 31/481 (6%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L K    DSAK  L  + Q G+   ++            G L + + L NS+      P 
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKSIF-----------GALMDTYPLCNSI------PS 164

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           VF  + LI    K+G  D A E  + +  +G  P   T N +L    + +       +F 
Sbjct: 165 VF--DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFR 222

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EMS +G+ P++ +F+ LI      G L +A    ++M+  G VP  V Y  ++N YC+ G
Sbjct: 223 EMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKG 282

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
               A+++ D M+ KG   DV TYN  ++ LC      +A  L  +M +  + P+  T+ 
Sbjct: 283 RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 342

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TLI+G  K+G +  A  +F+ M++  + P+ VTYN LI G C VG+ E+A +L   M + 
Sbjct: 343 TLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAA 402

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
                    G+ +N +   G+VTEA +++  M   G      +CN ++   CR G   +A
Sbjct: 403 ---------GLRLNEH---GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 450

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           ++FL  M   G+ P+SI+Y+ +ING+    +   AF+    M   G  P   TY  +L G
Sbjct: 451 EKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKG 510

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C+ G + +++  L R+       D   Y TL+       NL EA    D+M+Q   +PD
Sbjct: 511 LCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPD 570

Query: 485 D 485
            
Sbjct: 571 S 571


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 152/470 (32%), Positives = 245/470 (52%), Gaps = 8/470 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
             ALC+  + D A   L  M + G  PD V Y T+I+A C +G + EA  L+N M   G 
Sbjct: 166 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 225

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
              V T++ ++ G+C  GR   A  ++D M+  G  P   TY  LL   CR     EA  
Sbjct: 226 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 285

Query: 122 IFCEMSRRGVAPD--IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +       G  P+  +V F+T+IG     G+L  A   +  M   G  PD   Y+I+++G
Sbjct: 286 ML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 339

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G +  A+++  EM +KG   +VVTY  +L+  C+  M  +   L  EM  +G+  +
Sbjct: 340 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 399

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I+  CKDG M++A+ L   M  +   PDI +YNT+I   C   +ME+A  ++ 
Sbjct: 400 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 459

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +++   +  N I+Y  +I+     G   +A RL  EM+  G    +VS N +IK  C+ G
Sbjct: 460 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 519

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  ++   L +M  +G+ P+++SYN LI+   +E  +  A  L  +M NQGL PD++TYN
Sbjct: 520 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 579

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            ++ G C+ G MH +  +L ++  + ++PD  TY  LI+ H     L +A
Sbjct: 580 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 629



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 219/436 (50%), Gaps = 31/436 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC    +  A   L EM   G   D  T++ ++   C  G + EA +L++ M  KG
Sbjct: 200 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 259

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-------------------------- 94
             PGV TY  L+ GLC+  + D A+ +L  + ++                          
Sbjct: 260 CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYE 319

Query: 95  -----GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
                G  PD  TY+ L+   C+   +  A  +  EM ++G AP++V+++ ++  F +NG
Sbjct: 320 TMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNG 379

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
             D       EM + GL  ++  Y  +I   C++G + EA+ +  EM  +GC  D+ +YN
Sbjct: 380 MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYN 439

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           TI+  LC  + + EA+ +F  +LE GV  +  T+ T+IH   +DG    A+ L   M   
Sbjct: 440 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH 499

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
               D+V+YN LI   CK G ++++  L  +M  + I PN +SY ILI+  C    V +A
Sbjct: 500 GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDA 559

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  +M+ +G+ P +V+ NT+I G C+ G    A   L K+ +E V PD I+YN LI+ 
Sbjct: 560 LELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISW 619

Query: 390 FVREENMDKAFALVSK 405
             +   +D A  L+++
Sbjct: 620 HCKVRLLDDAAMLLNR 635



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 233/461 (50%), Gaps = 8/461 (1%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P T T+     A CR G  +EA  L+  M+  G  P    Y ++I+ LC +G    A 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L+EML MG + D  T++ ++   C    + EA  +   M  +G  P ++++  L+   
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 146 SRNGQLDRALMYFREMKSAGLVPD--NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            R  Q D A    R M   G VP+   VL+  +I G    G + EA ++ + M  KGC  
Sbjct: 275 CRVRQADEA----RAM--LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 328

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D  TY+ +++GLC+   +  A  L  EM ++G  P+  T+T ++H  CK+G  +    L 
Sbjct: 329 DAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALL 388

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           + M+ K +  +   YN +I   CK G M++A  L  +M S+  +P+  SY  +I   C+ 
Sbjct: 389 EEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNN 448

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             + EA  ++  ++ +G+    ++ NTII    R G    A     +M+  G   D +SY
Sbjct: 449 EQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSY 508

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N LI    ++ N+D++  L+ +M  +G+ P+ ++YN++++  C++ R+ D+  +  +M+ 
Sbjct: 509 NGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLN 568

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +GL PD  TY TLING      +  A    +++      PD
Sbjct: 569 QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 609



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 186/390 (47%), Gaps = 4/390 (1%)

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           + P T T+       CR     EA  +   M+R G  PD V + T+I      G +  A 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
               EM   G   D   +  ++ G C  G V EA ++ D M+ KGC+  V+TY  +L GL
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
           CR +   EA  +   + E  V      F T+I G   +G + +A  L++ M  K  +PD 
Sbjct: 275 CRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
            TY+ L+ G CK+G +  A +L  +M  +  +PN ++Y I+++ +C  G   +   L  E
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M  KG+       N +I   C+ G   +A   + +M S+G +PD  SYNT+I      E 
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 450

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           M++A  +   +  +G+V + ITYN I+    R GR  D+  +   MI  G + D  +Y  
Sbjct: 451 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 510

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           LI       N+  +    +EM ++G  P++
Sbjct: 511 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNN 540



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 181/353 (51%), Gaps = 4/353 (1%)

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           R  V P   +F        R G+ D AL   R M   G VPD VLY  +I+  C  G V 
Sbjct: 152 RDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT 211

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EA  + +EML  GC  DV T++ ++ G+C    + EA  L + M+ +G  P   T+  L+
Sbjct: 212 EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G C+    ++A      M  +  + ++V +NT+I G    G++ +A +L+  M  +   
Sbjct: 272 QGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQ 327

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+  +Y IL++G C +G +  A RL  EM  KG  P +V+   ++  +C++G        
Sbjct: 328 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 387

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           L +M ++G+  +S  YN +I    ++  MD+A  L+ +M +QG  PD+ +YN I+   C 
Sbjct: 388 LEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCN 447

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             +M ++E +   ++E+G+  +  TY T+I+  +     ++A R   EM+  G
Sbjct: 448 NEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 500



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 129/232 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ ALCKD ++D A   + EM  +G  PD  +YNT+I   C    +EEA  +  ++  +G
Sbjct: 406 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 465

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TYN++I+ L + GR   A  +  EM+  G S D  +YN L+   C+  N+  + 
Sbjct: 466 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 525

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+ +G+ P+ VS++ LI    +  ++  AL   ++M + GL PD V Y  +ING 
Sbjct: 526 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 585

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           C+ G++  AL + +++  +    D++TYN +++  C+ ++L +A  L N  +
Sbjct: 586 CKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 637



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 113/197 (57%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC + +++ A+     + ++GV  + +TYNT+I+A  R+G  ++A +L   M   G    
Sbjct: 445 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 504

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V +YN LI  +CK G  DR+  +L+EM + G+ P+  +YN L+ E C++  + +A E+  
Sbjct: 505 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 564

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           +M  +G+APDIV+++TLI    + G +  AL    ++ +  + PD + Y I+I+ +C+  
Sbjct: 565 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVR 624

Query: 185 FVLEALKMRDEMLEKGC 201
            + +A  + +  +   C
Sbjct: 625 LLDDAAMLLNRAMAAVC 641



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 1/177 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL +D +   A     EM   G   D V+YN LI A C++G ++ +  L+  M+ KG
Sbjct: 476 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 535

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   +YN LI+ LCK+ R   A E+  +ML  GL+PD  TYNTL+   C+   M  A 
Sbjct: 536 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF-REMKSAGLVPDNVLYTII 176
            +  ++    V PDI++++ LI    +   LD A M   R M +   V D  +  I+
Sbjct: 596 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQIL 652


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 253/482 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C+     SA   L  +  KG   D+   N +++A C +G ++E  +L+  +   G
Sbjct: 149 ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG 208

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + +YN+++ GLC   R D  +E++ EM+++G  P+ AT+NTL+   CR     +  
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVH 268

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   +M   G  PD+  ++T+I    ++G  + A      M S GL P+ V Y  ++ G 
Sbjct: 269 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 328

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      EA  +  EM ++ C +D VT+N +++  C+  ++    +L  +MLE G  PD 
Sbjct: 329 CSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDV 388

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TT+I+G CK+G +++A+ L   M+    KP+ ++Y  ++ G C+      A +L + 
Sbjct: 389 ITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISH 448

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +   PN +++  LIN  C  G V +A  L  +M+  G  P L+S +T+I G  ++G 
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 508

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L+ M+++G+ P++I Y+++ +   RE   DK   +   +++  +  D   YN 
Sbjct: 509 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 568

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++  C++     +      M+  G  P+ STYT LI G  S+  ++EA     E+  R 
Sbjct: 569 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRR 628

Query: 481 FV 482
            V
Sbjct: 629 AV 630



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 234/484 (48%), Gaps = 6/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC   +   A   L   +  G     V YN +I  YCR G +  A +L  ++    
Sbjct: 50  LIRSLCAAGRTADAARAL---DTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP--- 103

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TY  ++  LC +G    A  VLDEM   G +      + +L  +CR      A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                +  +G   D  + + ++      G +D  +   R++ S G  PD V Y  ++ G 
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +  ++  EM+  GC  +V T+NT++  LCR  +  +  +  ++M E G  PD 
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T+I G CKDG+   A ++   M    +KP++V YNT++ G C     E+A  L A+
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M       + +++ IL++ +C  G V     L  +M+  G  P +++  T+I G+C+ G 
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L  M + G  P++ISY  ++ G  R E    A  L+S M  QG +P+ +T+N 
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 463

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C++G +  +  +L +M+  G +PD  +Y+T+I+G       +EA    + M+ +G
Sbjct: 464 LINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 523

Query: 481 FVPD 484
             P+
Sbjct: 524 ITPN 527



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 221/451 (49%), Gaps = 6/451 (1%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           + LI + C  G   +A + +++    G   GV  YN++I G C+ G+             
Sbjct: 48  SALIRSLCAAGRTADAARALDT---AGDAAGVVAYNAMIAGYCRAGQ---VAAARRLAAA 101

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           + + P+  TY  ++   C +  +++A  +  EM  RG A        ++    R G    
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A+   + + + G   D+    ++++  C  G V E +++  ++   GC  D+V+YN +L 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLC AK   + ++L  EM+  G  P+  TF TLI   C++G   +       M +    P
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D+  Y T+IDG CK G  E AN + + M S  + PN + Y  ++ G CS     EA  L 
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EM  +      V+ N ++  +C++G   +  E L +M+  G  PD I+Y T+INGF +E
Sbjct: 342 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKE 401

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             +D+A  L+  M   G  P+ I+Y ++L G CR  R  D++ ++  MI++G  P+  T+
Sbjct: 402 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 461

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TLIN    +  +++A     +ML  G  PD
Sbjct: 462 NTLINFMCKKGLVEQAIELLKQMLVNGCSPD 492


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 156/484 (32%), Positives = 248/484 (51%), Gaps = 8/484 (1%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           ALC+  + D A   L  M + G  PDTV Y T+I+A C +G + EA  L++ M   G   
Sbjct: 181 ALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSA 240

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V T+N +++GLC  GR   A  ++D M+  G  P+  TY  LL   C    + EA  + 
Sbjct: 241 DVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTML 300

Query: 124 CEMSRRGVAPD--IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
                 G  P+  +V F+T+IG    +G+L  A   +  M S G  PD   Y+I+I+G C
Sbjct: 301 ------GRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLC 354

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G +  A+K+  EM +KG    +VTY  +L+  CR  M      +   M ++G+  +  
Sbjct: 355 KLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLE 414

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  +I   CKD  M+ A+     M  +  KPDI TYNT+I   C   +ME+A  L+ ++
Sbjct: 415 GYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENL 474

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +   +  N I+Y  LI+     G   +A  L  +MV  G    +VS N +IK  CR G+ 
Sbjct: 475 LHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNV 534

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            ++   LS+M  +G+ P+++SYN LI+   +   +  A  L  +M NQ L PD++TYN +
Sbjct: 535 DRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTL 594

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + G C+ G MH +  +L ++  + ++ D  TY  LI+ H     L +A    +  +  G 
Sbjct: 595 INGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGI 654

Query: 482 VPDD 485
            P++
Sbjct: 655 TPNE 658



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 225/506 (44%), Gaps = 71/506 (14%)

Query: 47  EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNT 105
           E A  L+ S+    + P      SL+  L +     RA  +LD++  +  +SP   +YNT
Sbjct: 85  ERALFLLESLPPSRVPP---LRESLLIPLFRSLAPGRALHLLDQLPHRFAVSPSFRSYNT 141

Query: 106 LLVESCRKENMSEAEEIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           +L    R +  ++   ++  M  R  V P   +FS       R G+ D AL   R M   
Sbjct: 142 VLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARH 201

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G VPD VLY  +I+  C  G V EA  + DEM   GC  DV T+N I++GLC    L EA
Sbjct: 202 GCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREA 261

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHC-------------------------------KD 253
             L + M+ RG  P+  T+  L+ G C                                D
Sbjct: 262 ARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLD 321

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G + +A  L++ M  K   PD  TY+ LI G CK+G +  A KL  +M  +  +P+ ++Y
Sbjct: 322 GKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTY 381

Query: 314 GILINGYCSMG-----------------------------------HVTEAFRLWYEMVG 338
            IL++ +C  G                                    + +A R   EM  
Sbjct: 382 TILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKS 441

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           +G KP + + NTII   C +    +A+     ++ EGV  ++I+YNTLI+  +R  +   
Sbjct: 442 QGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQD 501

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A +L + M   G   D+++YN ++   CR G +  S ++L  M EKG+ P+  +Y  LI+
Sbjct: 502 AISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLIS 561

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
                  +++A     EML +   PD
Sbjct: 562 ELCKTRRVRDALELSKEMLNQELTPD 587



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 212/394 (53%), Gaps = 4/394 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +++ A+  L  + +  V    V +NT+I     +G L+EA +L  +M  KG
Sbjct: 283 LLKGLCLASQVEEARTMLGRVPELNV----VLFNTVIGRCLLDGKLKEAAELYETMGSKG 338

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY+ LI+GLCK GR   A ++L EM   G +P   TY  LL   CR        
Sbjct: 339 CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIR 398

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   MS +G++ ++  ++ +I    ++ ++D A+ + +EMKS G  PD   Y  II   
Sbjct: 399 AMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHL 458

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C N  + EA  + + +L +G V + +TYNT+++ L R     +A  L N+M+  G   D 
Sbjct: 459 CNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDI 518

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LI   C+DGN+++++ L   M +K IKP+ V+YN LI   CK   +  A +L  +
Sbjct: 519 VSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKE 578

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++++++P+ ++Y  LING C MG +  A  L  ++  + +   +++ N +I  +C++  
Sbjct: 579 MLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARL 638

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
              A   L++ V+ G+ P+  ++  ++  FVR+ 
Sbjct: 639 LHDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 263/479 (54%), Gaps = 13/479 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK++K+D AK  L EM  KG  PD V+Y T+I++ C  G ++E  +L      + 
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AER 241

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN+LINGLCK+     A E++ EM++ G+SP+  +Y+TL+   C    +  A 
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
               +M +RG  P+I + S+L+ G F R    D   ++ + ++  GL P+ V Y  ++ G
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G +++A+ +   M E GC  ++ TY +++NG  +   L  A  ++N+ML  G  P+
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +T ++   C+     +A +L +IM++++  P + T+N  I G C  G ++ A K++ 
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481

Query: 300 DMISR-KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            M  + +  PN ++Y  L++G      + EA+ L  E+  +G++ +  + NT++ G C +
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME--NQGLVPDVI 416
           G    A + + KM+ +G  PD I+ N +I  + ++   ++A  ++  +    +   PDVI
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI 601

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           +Y  ++ G CR     D  ++L RMI  G+ P  +T++ LIN  +    L +  R HD+
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI----LDDIVRAHDQ 656



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 244/487 (50%), Gaps = 7/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L  D ++DS +  L +M+ +G +     + ++I+ Y + G  E A ++   +   G
Sbjct: 82  MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  YN +++ L  + R      V  +M + G  P+  TYN LL   C+   +  A+
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS +G  PD VS++T+I      G +       RE+ +    P   +Y  +ING 
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----REL-AERFEPVVSVYNALINGL 256

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+      A ++  EM+EKG   +V++Y+T++N LC +  +  A     +ML+RG  P+ 
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQK-SIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
           YT ++L+ G    G    AL+L++ M +   ++P++V YNTL+ GFC  G + KA  +++
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M     SPN  +YG LING+   G +  A  +W +M+  G  P +V    +++  CR  
Sbjct: 377 HMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHS 436

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV-PDVITY 418
              +A+  +  M  E   P   ++N  I G      +D A  +  +ME Q    P+++TY
Sbjct: 437 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTY 496

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N +L G  +  R+ ++  +   +  +G+    STY TL++G  +      A +   +M+ 
Sbjct: 497 NELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMV 556

Query: 479 RGFVPDD 485
            G  PD+
Sbjct: 557 DGKSPDE 563



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 246/497 (49%), Gaps = 23/497 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L  +++I    M   +M++ G  P+  TYN L+ A C+   ++ A +L+  MS KG
Sbjct: 152 VLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG 211

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   +Y ++I+ +C+ G     +E+ +        P  + YN L+   C++ +   A 
Sbjct: 212 CCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDYKGAF 266

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +G++P+++S+STLI +   +GQ++ A  +  +M   G  P+    + ++ G 
Sbjct: 267 ELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC 326

Query: 181 CRNGFVLEALKMRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
              G   +AL + ++M+   G   +VV YNT++ G C    + +A  +F+ M E G  P+
Sbjct: 327 FLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPN 386

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ +LI+G  K G+++ A+ +++ M      P++V Y  +++  C+  + ++A  L  
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG-IKPTLVSCNTIIKGYCRS 358
            M     +P+  ++   I G C  G +  A +++ +M  +    P +V+ N ++ G  ++
Sbjct: 447 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               +A     ++   GV+  S +YNTL++G         A  LV KM   G  PD IT 
Sbjct: 507 NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566

Query: 419 NVILTGFCRQGRMHDSELIL---------WRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           N+I+  +C+QG+   +  +L         WR       PD  +YT +I G    N  ++ 
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWR-------PDVISYTNVIWGLCRSNCREDG 619

Query: 470 FRFHDEMLQRGFVPDDA 486
               + M+  G VP  A
Sbjct: 620 VILLERMISAGIVPSIA 636



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 198/407 (48%), Gaps = 41/407 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+H    A   + EM +KG+ P+ ++Y+TLIN  C  G +E AF  +  M  +G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
             P ++T +SL+ G   +G    A ++ ++M++  GL P+   YNTL+   C   N+ +A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F  M   G +P+I ++ +LI  F++ G LD A+  + +M ++G  P+ V+YT ++  
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDV---------------------------------- 205
            CR+    EA  + + M ++ C   V                                  
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491

Query: 206 --VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
             VTYN +L+GL +A  + EA  L  E+  RGV     T+ TL+HG C  G    AL L 
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS---RKISPNYISYGILINGY 320
             M      PD +T N +I  +CK G+ E+A ++  D++S   RK  P+ ISY  +I G 
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM-LDLVSCGRRKWRPDVISYTNVIWGL 610

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           C      +   L   M+  GI P++ + + +I  +         D+F
Sbjct: 611 CRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRAHDQF 657



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 213/447 (47%), Gaps = 9/447 (2%)

Query: 42  REGFLEEAFQLMNSMSGKGL-KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDT 100
           +E  +  A     S++   L K    T+  +I  L   G+ D  + +L +M   G     
Sbjct: 52  QESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSE 111

Query: 101 ATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
             + ++ +   R+  ++E A E+F  +   G  P +  ++ ++       ++    M +R
Sbjct: 112 DLFISV-ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           +MK  G  P+   Y +++   C+N  V  A K+  EM  KGC  D V+Y T+++ +C   
Sbjct: 171 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
           ++ E  +L  E  E    P    +  LI+G CK+ +   A  L   M +K I P++++Y+
Sbjct: 231 LVKEGREL-AERFE----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV-G 338
           TLI+  C  G++E A      M+ R   PN  +   L+ G    G   +A  LW +M+ G
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G++P +V+ NT+++G+C  G+  KA    S M   G  P+  +Y +LINGF +  ++D 
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  + +KM   G  P+V+ Y  ++   CR  +  ++E ++  M ++   P   T+   I 
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G      L  A +   +M Q+   P +
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPN 492


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 152/470 (32%), Positives = 245/470 (52%), Gaps = 8/470 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
             ALC+  + D A   L  M + G  PD V Y T+I+A C +G + EA  L+N M   G 
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
              V T++ ++ G+C  GR   A  ++D M+  G  P   TY  LL   CR     EA  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 122 IFCEMSRRGVAPD--IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +       G  P+  +V F+T+IG     G+L  A   +  M   G  PD   Y+I+++G
Sbjct: 302 ML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 355

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G +  A+++  EM +KG   +VVTY  +L+  C+  M  +   L  EM  +G+  +
Sbjct: 356 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  +I+  CKDG M++A+ L   M  +   PDI +YNT+I   C   +ME+A  ++ 
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +++   +  N I+Y  +I+     G   +A RL  EM+  G    +VS N +IK  C+ G
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  ++   L +M  +G+ P+++SYN LI+   +E  +  A  L  +M NQGL PD++TYN
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            ++ G C+ G MH +  +L ++  + ++PD  TY  LI+ H     L +A
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 219/436 (50%), Gaps = 31/436 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC    +  A   L EM   G   D  T++ ++   C  G + EA +L++ M  KG
Sbjct: 216 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 275

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-------------------------- 94
             PGV TY  L+ GLC+  + D A+ +L  + ++                          
Sbjct: 276 CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYE 335

Query: 95  -----GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
                G  PD  TY+ L+   C+   +  A  +  EM ++G AP++V+++ ++  F +NG
Sbjct: 336 TMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNG 395

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
             D       EM + GL  ++  Y  +I   C++G + EA+ +  EM  +GC  D+ +YN
Sbjct: 396 MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYN 455

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           TI+  LC  + + EA+ +F  +LE GV  +  T+ T+IH   +DG    A+ L   M   
Sbjct: 456 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH 515

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
               D+V+YN LI   CK G ++++  L  +M  + I PN +SY ILI+  C    V +A
Sbjct: 516 GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDA 575

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  +M+ +G+ P +V+ NT+I G C+ G    A   L K+ +E V PD I+YN LI+ 
Sbjct: 576 LELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISW 635

Query: 390 FVREENMDKAFALVSK 405
             +   +D A  L+++
Sbjct: 636 HCKVRLLDDAAMLLNR 651



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 240/479 (50%), Gaps = 8/479 (1%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D   D+  ++   + +  V P T T+     A CR G  +EA  L+  M+  G  P    
Sbjct: 153 DCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVL 212

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y ++I+ LC +G    A  +L+EML MG + D  T++ ++   C    + EA  +   M 
Sbjct: 213 YQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMM 272

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD--NVLYTIIINGYCRNGF 185
            +G  P ++++  L+    R  Q D A    R M   G VP+   VL+  +I G    G 
Sbjct: 273 TKGCMPGVMTYGFLLQGLCRVRQADEA----RAM--LGRVPELNVVLFNTVIGGCLAEGK 326

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + EA ++ + M  KGC  D  TY+ +++GLC+   +  A  L  EM ++G  P+  T+T 
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTI 386

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           ++H  CK+G  +    L + M+ K +  +   YN +I   CK G M++A  L  +M S+ 
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
            +P+  SY  +I   C+   + EA  ++  ++ +G+    ++ NTII    R G    A 
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
               +M+  G   D +SYN LI    ++ N+D++  L+ +M  +G+ P+ ++YN++++  
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C++ R+ D+  +  +M+ +GL PD  TY TLING      +  A    +++      PD
Sbjct: 567 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 204/436 (46%), Gaps = 33/436 (7%)

Query: 83  RAKEVLDEM-LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG-VAPDIVSFST 140
           RA  +LD++  + G+ P   +YN +L    R +  ++A  ++  M  R  V P   +F  
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
                 R G+ D AL   R M   G VPD VLY  +I+  C  G V EA  + +EML  G
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK-------- 252
           C  DV T++ ++ G+C    + EA  L + M+ +G  P   T+  L+ G C+        
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 253 -----------------------DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                                  +G + +A  L++ M  K  +PD  TY+ L+ G CK+G
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +  A +L  +M  +  +PN ++Y I+++ +C  G   +   L  EM  KG+       N
Sbjct: 361 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I   C+ G   +A   + +M S+G +PD  SYNT+I      E M++A  +   +  +
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+V + ITYN I+    R GR  D+  +   MI  G + D  +Y  LI       N+  +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540

Query: 470 FRFHDEMLQRGFVPDD 485
               +EM ++G  P++
Sbjct: 541 LVLLEEMAEKGIKPNN 556



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 129/232 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ ALCKD ++D A   + EM  +G  PD  +YNT+I   C    +EEA  +  ++  +G
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TYN++I+ L + GR   A  +  EM+  G S D  +YN L+   C+  N+  + 
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+ +G+ P+ VS++ LI    +  ++  AL   ++M + GL PD V Y  +ING 
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           C+ G++  AL + +++  +    D++TYN +++  C+ ++L +A  L N  +
Sbjct: 602 CKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 113/197 (57%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC + +++ A+     + ++GV  + +TYNT+I+A  R+G  ++A +L   M   G    
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V +YN LI  +CK G  DR+  +L+EM + G+ P+  +YN L+ E C++  + +A E+  
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           +M  +G+APDIV+++TLI    + G +  AL    ++ +  + PD + Y I+I+ +C+  
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVR 640

Query: 185 FVLEALKMRDEMLEKGC 201
            + +A  + +  +   C
Sbjct: 641 LLDDAAMLLNRAMAAVC 657



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 1/177 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL +D +   A     EM   G   D V+YN LI A C++G ++ +  L+  M+ KG
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   +YN LI+ LCK+ R   A E+  +ML  GL+PD  TYNTL+   C+   M  A 
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF-REMKSAGLVPDNVLYTII 176
            +  ++    V PDI++++ LI    +   LD A M   R M +   V D  +  I+
Sbjct: 612 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQIL 668


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 251/484 (51%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+ +I  A+  L EM  +GV P   TYN +I+ YC+ G +++A  +   M   G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +TYNSLI GLC  G+ D A+E+L+  +  G +P   T+  L+   C+ E + +A 
Sbjct: 350 CNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M       D+ ++  LI +  +  +L  A     EM + GL P+ V YT II+GY
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGY 468

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  AL++   M  +GC  +  TY +++ GL + K L +A  L  +M E G+ P  
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGV 528

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI G CK    + A  LF++M Q  + PD   YN L D  CK G  E+A   ++ 
Sbjct: 529 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSF 585

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + +    ++Y  L++G+   G+   A  L  +MV +G K  L + + +++  C+   
Sbjct: 586 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKK 645

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A   L +M   GV  + ++Y  +I+  ++E   D A +L ++M + G  P   TY V
Sbjct: 646 LNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTV 705

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            ++ +C+ GR+ ++E ++  M   G+ PD  TY   ING      +  AF     M+   
Sbjct: 706 FISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDAS 765

Query: 481 FVPD 484
             P+
Sbjct: 766 CEPN 769



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 243/500 (48%), Gaps = 19/500 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +ID A      M       D   Y  LIN   ++  L+EA + +N M   G
Sbjct: 394 LINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY S+I+G CK G    A EV   M   G  P+  TY +L+    + + + +A 
Sbjct: 454 LAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAM 513

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G+ P +++++TLI    +  + D A   F  M+  GL PD   Y ++ +  
Sbjct: 514 ALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDAL 573

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G   EA      ++ KG V+  VTY ++++G  +A     A  L  +M+  G   D 
Sbjct: 574 CKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT++ L+   CK   +N+AL++ D MT   +K +IV Y  +I    K G+ + A  L+ +
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS    P+  +Y + I+ YC +G + EA  L  EM   G+ P +V+ N  I G    G 
Sbjct: 691 MISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGY 750

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREE----------------NMDKAFALVS 404
             +A   L +MV    +P+  +Y  L+  F++                   ++  + L+ 
Sbjct: 751 IDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLE 810

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M   GL P V+TY+ I+ GFC+  R+ ++ ++L  M+ K ++P+   YT LI       
Sbjct: 811 RMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIK 870

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
              +A  F  +M++ GF P 
Sbjct: 871 LFGKAVSFVTDMIEFGFQPQ 890



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/518 (29%), Positives = 248/518 (47%), Gaps = 39/518 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ A CK   +  A  + C + + G+  DT T N L+  YCR   L +A  L+  M   G
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244

Query: 61  LKPGVFTYNSLIN-----------------------------------GLCKKGRCDRAK 85
            +   ++Y  LI                                    GLCK+GR   A+
Sbjct: 245 CRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDAR 304

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +LDEM   G+ P   TYN ++   C+   M +A  I   M + G  PD  ++++LI   
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+LD A        + G  P  + +T +INGYC+   + +AL+++  M+   C +D+
Sbjct: 365 C-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y  ++N L +   L EA +  NEM   G+ P+  T+T++I G+CK G +  AL +F +
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKL 483

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  +   P+  TY +LI G  +  ++ KA  L   M    I+P  I+Y  LI G C    
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 543

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              AFRL+  M   G+ P   + N +    C+SG A +A  FL   V +GV    ++Y +
Sbjct: 544 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTS 600

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++GF +  N D A  L+ KM N+G   D+ TY+V+L   C+Q +++++  IL +M   G
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +  +   YT +I+  + +     A    +EM+  G  P
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 239/462 (51%), Gaps = 4/462 (0%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           Q+G+ PDTVTYNT+I AYC++G L  A +    +   G++   +T N+L+ G C+     
Sbjct: 172 QEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLR 231

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           +A  +L  M  MG   +  +Y  L+   C    + EA  +   M   G + ++ +++ LI
Sbjct: 232 KACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLI 291

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               + G++  A     EM   G+VP    Y  +I+GYC++G + +AL ++  M + GC 
Sbjct: 292 KGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCN 351

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D  TYN+++ GLC  K L EA++L N  + RG  P   TFT LI+G+CK   ++ AL +
Sbjct: 352 PDDWTYNSLIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV 410

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
              M   + K D+  Y  LI+   K   +++A +   +M +  ++PN ++Y  +I+GYC 
Sbjct: 411 KSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCK 470

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +G V  A  ++  M  +G  P   +  ++I G  +     KA   ++KM  +G+ P  I+
Sbjct: 471 VGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIT 530

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y TLI G  ++   D AF L   ME  GL PD   YNV+    C+ GR  ++   L   +
Sbjct: 531 YTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---V 587

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            KG+   + TYT+L++G     N   A    ++M+  G   D
Sbjct: 588 RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 629



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 225/438 (51%), Gaps = 1/438 (0%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           +A Q +  + GK L      YN  +  L +    +   ++   ++Q GL PDT TYNT++
Sbjct: 127 DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMI 186

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
           +  C+K +++ A   FC +   G+  D  + + L+  + R   L +A      M   G  
Sbjct: 187 MAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCR 246

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
            +   YTI+I G C    V EAL +   M+  GC +++ TY  ++ GLC+   + +A  L
Sbjct: 247 RNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGL 306

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
            +EM  RGV P  +T+  +I G+CK G M  AL +  +M Q    PD  TYN+LI G C 
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG 366

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G++++A +L    I+R  +P  I++  LINGYC    + +A R+   M+    K  L +
Sbjct: 367 -GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQA 425

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              +I    +     +A E L++M + G+ P+ ++Y ++I+G+ +   +  A  +   ME
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLME 485

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           ++G  P+  TY  ++ G  +  ++H +  ++ +M E G+ P   TYTTLI G   ++   
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 545

Query: 468 EAFRFHDEMLQRGFVPDD 485
            AFR  + M Q G  PD+
Sbjct: 546 NAFRLFEMMEQNGLTPDE 563



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 230/451 (50%), Gaps = 6/451 (1%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN  + +  R    E   +L + +  +GL P   TYN++I   CKKG    A      + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           + G+  DT T N LL+  CR  ++ +A  +   M   G   +  S++ LI        + 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            AL+    M   G   +   YT++I G C+ G + +A  + DEM  +G V  V TYN ++
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           +G C++  + +A  +   M + G  PD +T+ +LI+G C  G +++A  L +    +   
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P ++T+  LI+G+CK   ++ A ++ ++MIS     +  +YG+LIN       + EA   
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             EM   G+ P +V+  +II GYC+ G    A E    M  EG  P++ +Y +LI G ++
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-GLNPDRS 451
           ++ + KA AL++KM+  G+ P VITY  ++ G C++    D+   L+ M+E+ GL PD  
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF-DNAFRLFEMMEQNGLTPDEQ 564

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            Y  L +        +EA+ F   ++++G V
Sbjct: 565 AYNVLTDALCKSGRAEEAYSF---LVRKGVV 592



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 238/510 (46%), Gaps = 54/510 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  ++  AK  L EM   G+ P+ VTY ++I+ YC+ G +  A ++   M  +G
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEG 488

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +TY SLI GL +  +  +A  ++ +M + G++P   TY TL+   C+K     A 
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 548

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M + G+ PD  +++ L     ++G+ + A  +   +   G+V   V YT +++G+
Sbjct: 549 RLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGF 605

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A  + ++M+ +GC  D+ TY+ +L  LC+ K L EA  + ++M   GV  + 
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I    K+G  + A +LF+ M     KP   TY   I  +CK+G +E+A  L  +
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGE 725

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRL---------------------------- 332
           M    ++P+ ++Y I ING   MG++  AF                              
Sbjct: 726 MERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSL 785

Query: 333 -------------WYE----------MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
                        W E          M+  G+ PT+V+ ++II G+C++    +A   L 
Sbjct: 786 INAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLD 845

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M+ + + P+   Y  LI      +   KA + V+ M   G  P + +Y+ ++ G C +G
Sbjct: 846 HMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEG 905

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLING 459
               ++ +   ++    N +   +  L +G
Sbjct: 906 DYDRAKSLFCDLLGMDYNHNEVAWKILNDG 935



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 217/437 (49%), Gaps = 19/437 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK H+ D+A      MEQ G+ PD   YN L +A C+ G  EEA+  +     KG
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KG 590

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY SL++G  K G  D A  ++++M+  G   D  TY+ LL   C+++ ++EA 
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M+  GV  +IV+++ +I    + G+ D A   F EM S+G  P    YT+ I+ Y
Sbjct: 651 SILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSY 710

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  +  EM   G   DVVTYN  +NG      +  A      M++    P+ 
Sbjct: 711 CKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNC 770

Query: 241 YTF---------TTLIHGHCKDGN-------MNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
           +T+          +LI+ H  D +       +N    L + M +  + P +VTY+++I G
Sbjct: 771 WTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAG 830

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           FCK   +E+A  L   M+ + ISPN   Y +LI   C +    +A     +M+  G +P 
Sbjct: 831 FCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQ 890

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           L S + +I G C  GD  +A      ++    + + +++  L +G ++  ++D    L++
Sbjct: 891 LESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLA 950

Query: 405 KMENQGLVPDVITYNVI 421
            M+N+    D  +Y+++
Sbjct: 951 AMDNRHCRIDSESYSML 967



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 224/509 (44%), Gaps = 54/509 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   + +A      ME +G +P+  TY +LI    ++  L +A  L+  M   G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + PGV TY +LI G CKK   D A  + + M Q GL+PD   YN L    C+      AE
Sbjct: 524 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKS---GRAE 580

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E +  + R+GV    V++++L+  FS+ G  D A +   +M + G   D   Y++++   
Sbjct: 581 EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EAL + D+M   G   ++V Y  I++ + +      A  LFNEM+  G  P  
Sbjct: 641 CKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSA 700

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA------ 294
            T+T  I  +CK G + +A +L   M +  + PD+VTYN  I+G   +G +++A      
Sbjct: 701 TTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKR 760

Query: 295 ------------------------------------------NKLWA---DMISRKISPN 309
                                                     N +W     M+   ++P 
Sbjct: 761 MVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPT 820

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y  +I G+C    + EA  L   M+GK I P       +IK  C      KA  F++
Sbjct: 821 VVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVT 880

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M+  G  P   SY+ LI G   E + D+A +L   +       + + + ++  G  + G
Sbjct: 881 DMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAG 940

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLIN 458
            +     +L  M  +    D  +Y+ L +
Sbjct: 941 HVDFCSQLLAAMDNRHCRIDSESYSMLTD 969



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 51/265 (19%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAF----------- 50
           +++ CK  +I+ A+  + EME+ GV PD VTYN  IN     G+++ AF           
Sbjct: 707 ISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASC 766

Query: 51  ----------------------------------------QLMNSMSGKGLKPGVFTYNS 70
                                                   QL+  M   GL P V TY+S
Sbjct: 767 EPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSS 826

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +I G CK  R + A  +LD ML   +SP+   Y  L+   C  +   +A     +M   G
Sbjct: 827 IIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFG 886

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P + S+  LI      G  DRA   F ++       + V + I+ +G  + G V    
Sbjct: 887 FQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCS 946

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGL 215
           ++   M  + C +D  +Y+ + + +
Sbjct: 947 QLLAAMDNRHCRIDSESYSMLTDSI 971


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 167/539 (30%), Positives = 262/539 (48%), Gaps = 55/539 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +L KD ++D    F  EM    V P+  T+N L+NA C  G  + A  L+  M   G
Sbjct: 150 VLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETG 209

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN+L+N  CKKGR   A E++D M   G++ D  TYN L+ + CRK   ++  
Sbjct: 210 HFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGY 269

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M +  V P+ ++++TLI    + G++  A   F EM    L+P++V Y  +I G+
Sbjct: 270 LILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGH 329

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C NG + EAL++ D M+  G   + VTY  +LNG+ +         +   M   GV    
Sbjct: 330 CSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGH 389

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF--------------- 285
            ++TT+I G CK+G + +A+ L D M + S+ PDIVT++ L++GF               
Sbjct: 390 ISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTL 449

Query: 286 ----CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
               CK+G +++A   +A M       ++ +  +L+  +C  G + EA      M   G+
Sbjct: 450 IYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGL 509

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS------------------- 382
            P+ V+ + II  Y  SGDA KA     KM S G  P   +                   
Sbjct: 510 APSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKI 569

Query: 383 ----------------YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
                           YNT++    R  N+  A AL+ +M     VPD  TY  ++ G C
Sbjct: 570 FMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLC 629

Query: 427 RQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           R+G+M  + L+  R IEKG L+P+ + YT+L++G + + + K A    ++ML  G  PD
Sbjct: 630 RKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPD 688



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 164/601 (27%), Positives = 262/601 (43%), Gaps = 125/601 (20%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K+ KI  A     EM    + P++VTYNTLI  +C  G +EEA +L + M   G
Sbjct: 290 LINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHG 349

Query: 61  LKP-----------------------------------GVFTYNSLINGLCKKGRCDRAK 85
           L+P                                   G  +Y ++I+GLCK G  + A 
Sbjct: 350 LRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAV 409

Query: 86  EVLDEMLQMGLSPDTATYNTL--------------------------------------- 106
           ++LD+ML++ +SPD  T++ L                                       
Sbjct: 410 QLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVM 469

Query: 107 --------------LVES-CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
                         LV S CR   + EAE     MSR G+AP  V+F  +I  +  +G  
Sbjct: 470 NQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDA 529

Query: 152 DRALMYFREMKSAGLVPD-----------------------------------NVLYTII 176
            +A   F +M S G +P                                    +  Y  +
Sbjct: 530 LKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTM 589

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           +    R+G +  A+ + DEM+    V D  TY +++ GLCR   +  A  L    +E+G+
Sbjct: 590 LTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGL 649

Query: 237 F-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+   +T+L+ G  K+G+   AL +F+ M  + ++PD + +N L+D + + G+M K N
Sbjct: 650 LSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVN 709

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            + + M SR +  N  +Y IL++GY     +    +L+ EM+  G  P  ++ +++I GY
Sbjct: 710 DILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGY 769

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+SG    A +FL K+  EG   D  + N L++       +  AF LV ++   G+ P+V
Sbjct: 770 CKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNV 829

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            TYN +  GF R     ++  IL  ++E G  P    +TTLI G     N+K A    DE
Sbjct: 830 DTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDE 889

Query: 476 M 476
           M
Sbjct: 890 M 890



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 244/522 (46%), Gaps = 36/522 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V + C+  +++ A+ F+  M + G+ P +VT++ +I+ Y   G   +AF + + M+  G
Sbjct: 484  LVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLG 543

Query: 61   LKPGVFTY-----------------------------------NSLINGLCKKGRCDRAK 85
              P  FTY                                   N+++    + G    A 
Sbjct: 544  HLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAV 603

Query: 86   EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV-APDIVSFSTLIGI 144
             +LDEM+     PD+ TY +L+   CRK  M  A  +      +G+ +P+   +++L+  
Sbjct: 604  ALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDG 663

Query: 145  FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
              + G    AL  F +M + G+ PD + + ++++ Y R G + +   +   M  +    +
Sbjct: 664  LLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFN 723

Query: 205  VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            + TYN +L+G  +   +     L+NEM+  G  PD  T+ +LI G+CK G+++ A+    
Sbjct: 724  LATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLR 783

Query: 265  IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
             +T +  K D  T N L+   C+  E++ A  L   +    ++PN  +Y  L NG+    
Sbjct: 784  KITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTC 843

Query: 325  HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               EA  + + ++  G  PT     T+I+G CR G+   A E   +M   GV    ++ +
Sbjct: 844  SFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMS 903

Query: 385  TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             +I G  R    D+A  ++  M    ++P V T+  ++  +C++G +  +  +   M + 
Sbjct: 904  AIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQC 963

Query: 445  GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +  D + Y  LI+G  +  +++ AF+ ++EM QR   P+ +
Sbjct: 964  HVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTS 1005



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 219/463 (47%), Gaps = 20/463 (4%)

Query: 27  YP----DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           YP    +   ++ LI    RE  + +A +    M  +G  P VFT N ++  L K    D
Sbjct: 102 YPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVD 161

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
                  EM+   +SP+ AT+N LL   C +     A  +  +M   G  P  V+++TL+
Sbjct: 162 LFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLL 221

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             + + G+   A      M S G+  D   Y ++I+  CR     +   +   M +    
Sbjct: 222 NWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVY 281

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            + +TYNT++NGL +   +  A  +F EM    + P+  T+ TLI GHC +GN+ +AL L
Sbjct: 282 PNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRL 341

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            D+M    ++P+ VTY  L++G  K  +    + +   M    +   +ISY  +I+G C 
Sbjct: 342 CDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCK 401

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G + EA +L  +M+   + P +V+ + ++ G+ ++                G+ P+ + 
Sbjct: 402 NGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKT----------------GLVPNRVL 445

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           ++TLI  + +  N+ +A    + M   G V D  T +V++  FCR GR+ ++E  +  M 
Sbjct: 446 HSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMS 505

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             GL P   T+  +I+ + +  +  +AF   D+M   G +P  
Sbjct: 506 RMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQ 548



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 223/457 (48%), Gaps = 3/457 (0%)

Query: 11   IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
            I+ AK+F+           +  YNT++    R G L  A  L++ M      P  FTY S
Sbjct: 564  INEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTS 623

Query: 71   LINGLCKKGRCDRAKEVLDEMLQMGL-SPDTATYNTLLVESCRKENMSEAE-EIFCEMSR 128
            LI GLC+KG+   A  +    ++ GL SP+ A Y T LV+   KE  S+A   +F +M  
Sbjct: 624  LIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMY-TSLVDGLLKEGHSKAALYMFEDMLN 682

Query: 129  RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
             GV PD ++F+ L+  +SR G++ +       M+S  L  +   Y I+++GY +   +  
Sbjct: 683  EGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMAR 742

Query: 189  ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
              K+ +EM+  G   D +T+++++ G C++  L  A     ++   G   D +T   L+ 
Sbjct: 743  CSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVS 802

Query: 249  GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
              C+   +  A +L   +    + P++ TYN+L +GF +    ++A  +   ++    +P
Sbjct: 803  KLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAP 862

Query: 309  NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
                +  LI G C MG+V  A  L  EM   G+    V+ + II+G  RS    +A   L
Sbjct: 863  TCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRIL 922

Query: 369  SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
              M+   + P   ++ TL++ + +E N+ KA  L S ME   +  DV  YNV+++G C  
Sbjct: 923  GIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCAD 982

Query: 429  GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
            G +  +  +   M ++ + P+ S Y  LI+  +   N
Sbjct: 983  GDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGN 1019



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 214/440 (48%), Gaps = 2/440 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            M+    +   + +A   L EM      PD+ TY +LI   CR+G +  A  L      KG
Sbjct: 589  MLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKG 648

Query: 61   L-KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            L  P    Y SL++GL K+G    A  + ++ML  G+ PD   +N LL    RK  MS+ 
Sbjct: 649  LLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKV 708

Query: 120  EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +I   M  R +  ++ +++ L+  +S+   + R    + EM   G  PD + +  +I G
Sbjct: 709  NDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILG 768

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            YC++G +  A+K   ++  +G  +D  T N +++ LC    +  A DL  ++   GV P+
Sbjct: 769  YCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPN 828

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              T+ +L +G  +  + ++A  +   + +    P    + TLI G C++G ++ A +L  
Sbjct: 829  VDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQD 888

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +M    +S   ++   +I G        EA R+   M+   I PT+ +  T++  YC+ G
Sbjct: 889  EMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEG 948

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            + +KA E  S M    V  D  +YN LI+G   + ++  AF L  +ME + + P+   Y 
Sbjct: 949  NVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYI 1008

Query: 420  VILTGF-CRQGRMHDSELIL 438
            V++  F C    + +SE +L
Sbjct: 1009 VLIDSFLCTGNYIVESEKLL 1028


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 270/499 (54%), Gaps = 13/499 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L KD   D+    L E++   +     T++ LI AY + G  E+A +    M   G
Sbjct: 102 VIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFG 161

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP VFTYNS+++ + +K     A  V ++ML++  +P+ AT+  LL   C+     +A 
Sbjct: 162 CKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDAL 221

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM+++G+ P+ + ++ ++    +  + D        MK +G  PD++    +++G+
Sbjct: 222 KMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGF 281

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  +     ++G V+ +  Y+++++GL RAK   E  +   +M + G+ PD 
Sbjct: 282 CKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDV 341

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T LI G C+ G ++ ALN+ + MTQ+ + PD   YN LI GFC VG ++KA  L  +
Sbjct: 342 VLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLE 401

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +      P   +Y ILI G C  G + EA +++ +M   G  P++++ N +I G C++G+
Sbjct: 402 ISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGE 461

Query: 361 ASKADEFLSKM-----------VSEGVDP--DSISYNTLINGFVREENMDKAFALVSKME 407
             +A     KM           +S+G D   D+ S  T++        + KA+ L+ ++ 
Sbjct: 462 LEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLA 521

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           + G+VPD++TYNV++ GFC+   ++ +  +   +  KG +PD  TY TLI+G    +  +
Sbjct: 522 DSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREE 581

Query: 468 EAFRFHDEMLQRGFVPDDA 486
           +AFR  D+M++ G  P  A
Sbjct: 582 DAFRVLDQMVKNGCTPSSA 600



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 240/533 (45%), Gaps = 49/533 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  + D     L  M+  G  PD++T N L++ +C+ G ++EAF L+     +G
Sbjct: 242 ILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              G+  Y+SLI+GL +  R D  +E   +M + G+ PD   Y  L+   C    +  A 
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYAL 361

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M++RG++PD   ++ LI  F   G LD+A     E+      P +  YTI+I G 
Sbjct: 362 NMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGM 421

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF------------ 228
           CRNG + EA ++ ++M   GC   ++T+N +++GLC+A  L EA  LF            
Sbjct: 422 CRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLF 481

Query: 229 ----------------NEMLER--------------------GVFPDFYTFTTLIHGHCK 252
                             M+ER                    GV PD  T+  LI+G CK
Sbjct: 482 LRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCK 541

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
             N+N A  LF  +  K   PD VTY TLIDGF +V   E A ++   M+    +P+   
Sbjct: 542 AKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAV 601

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y  L+   C  G ++ AF LW + + + +         + + +   G+  KA   L +M 
Sbjct: 602 YKCLMTWSCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMN 660

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            +  + +   Y   + G  +    ++A  +   ++   +  +  +  +++ G C+ G + 
Sbjct: 661 FKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLE 720

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            +  I    +EKG          L+   + Q+ +K A    + M   G+  D+
Sbjct: 721 MAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDE 773



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 180/361 (49%)

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           F   +RR      V+ + +I + +++   D       E+K++ +      ++++I  Y +
Sbjct: 84  FIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAK 143

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           +G   +A++   +M + GC  DV TYN+IL+ + + ++   A  ++N+ML+    P+  T
Sbjct: 144 SGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRAT 203

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           F  L++G CK+G  + AL +FD MTQK I P+ + Y  ++ G C+    +  ++L   M 
Sbjct: 204 FVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMK 263

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
                P+ I+   L++G+C +G + EAF L      +G    +   +++I G  R+    
Sbjct: 264 VSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYD 323

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +  E+  KM   G++PD + Y  LI GF     +D A  +++ M  +GL PD   YN ++
Sbjct: 324 EVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALI 383

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            GFC  G +  +  +   + +    P   TYT LI G      L EA +  ++M   G  
Sbjct: 384 KGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCS 443

Query: 483 P 483
           P
Sbjct: 444 P 444



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 87/181 (48%)

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R+   +++++ ++I+           +++  E+    I+    + + +I  Y +SG A K
Sbjct: 90  RRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEK 149

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E   KM   G  PD  +YN++++  V++E    A A+ ++M      P+  T+ ++L 
Sbjct: 150 AVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLN 209

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G C+ G+  D+  +   M +KG+ P+   YT +++G        +  R  + M   G  P
Sbjct: 210 GLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCP 269

Query: 484 D 484
           D
Sbjct: 270 D 270



 Score = 41.6 bits (96), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 19/106 (17%), Positives = 54/106 (50%)

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           +++N +I+   +++  D  + ++ +++N  +     T++V++  + + G    +     +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           M + G  PD  TY ++++  V +     A   +++ML+  + P+ A
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRA 202


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 250/486 (51%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALCK  ++D A      ME+  V P  VT+  LIN   R     E   L+  M G G
Sbjct: 272 LMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLG 331

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P     N LI+  C+KG    A  + DEM+   +     TYN +    C++  M  AE
Sbjct: 332 ITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAE 391

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            I  EM   G+      F++++ G+  R G+L+  +    EM   G+ P++ L T     
Sbjct: 392 RILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQ 451

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+     EA+ +  +MLEKG  +++ T N +++GLC  K +  A ++   M+ +G+  D
Sbjct: 452 LCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELD 511

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +I G CKD  + +AL L D M +K  KPD   +N++I  +C +G+ME+A  L  
Sbjct: 512 NITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLG 571

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M    + P+ +SYG +I+GYC    + +A     E++  G+KP  V  N +I GY R+G
Sbjct: 572 QMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNG 631

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           + S A   L  M S G+ P +++Y +L++       +D+A  +  +     +   V+ Y 
Sbjct: 632 NISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYT 691

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++ G C+ G+M ++      M  + + P++ TYTTL+  +    N +EA +  DEM+  
Sbjct: 692 IMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSS 751

Query: 480 GFVPDD 485
           G VPD+
Sbjct: 752 GIVPDN 757



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 247/477 (51%), Gaps = 1/477 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  +       L EME  G+ P+ V  N LI+ +CR+G   EA +L + M  K 
Sbjct: 307 LINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKE 366

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K    TYN +   LCK+G  +RA+ +L+EML  G++  +  +N+++    ++    E+ 
Sbjct: 367 MKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESV 426

Query: 121 -EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM +RG+ P+    +       +  +   A+  + +M   GL  +      +I+G
Sbjct: 427 VRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHG 486

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C    +  A ++   M+ KG  +D +TYN ++ G C+   + EA  L ++M+ +G  PD
Sbjct: 487 LCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPD 546

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            Y F ++IH +C  G M +AL+L   M  + ++PD+V+Y T+IDG+CK  +++KAN+   
Sbjct: 547 AYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLN 606

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           ++++  + PN + Y  LI GY   G+++ A  +   M   GI+PT V+  +++   C +G
Sbjct: 607 ELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAG 666

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A     +     ++   + Y  +I G  +   MD+A     +M ++ + P+ ITY 
Sbjct: 667 LVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYT 726

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            ++  +C+ G   ++  +   M+  G+ PD  +Y TL+ G    ++L +A     E+
Sbjct: 727 TLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEI 783



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 233/432 (53%), Gaps = 4/432 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYC-REGFLEEAFQLMNSMSGK 59
           +  ALCK+ +++ A+  L EM   G+   +  +N+++     R G LE   +L++ M  +
Sbjct: 377 IARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKR 436

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+KP      +    LC+  R   A  +  +ML+ GL  + AT N L+   C  +NM  A
Sbjct: 437 GMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGA 496

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M  +G+  D ++++ +I    ++ +++ AL    +M   G  PD  ++  II+ 
Sbjct: 497 TEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHA 556

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC  G + EAL +  +M  +G   DVV+Y TI++G C+AK + +A++  NE++  G+ P+
Sbjct: 557 YCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPN 616

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  LI G+ ++GN++ A+ + D M    I+P  VTY +L+   C  G +++A  ++ 
Sbjct: 617 AVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFE 676

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                 I    + Y I+I G C +G + EA   + EM  + I P  ++  T++  YC+SG
Sbjct: 677 QSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSG 736

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF---ALVSKMENQGLVPDVI 416
           +  +A +   +MVS G+ PD++SYNTL+ GF + +++DKA    A +S +  Q    D +
Sbjct: 737 NNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDCLDNV 796

Query: 417 TYNVILTGFCRQ 428
             N I T +C +
Sbjct: 797 LVNRITTPWCEK 808



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 205/431 (47%), Gaps = 47/431 (10%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           SP   T N LL    R  N+    ++F EM   + V P+  S++++I    + G++D   
Sbjct: 190 SPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGF 249

Query: 156 MYFREM------KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
               ++      +SAG VP    Y ++++  C++G V EA++++  M E      +VT+ 
Sbjct: 250 KILSDLIHAGLQQSAGAVP----YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFG 305

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            ++NGL R+    E   L  EM   G+ P+      LI  HC+ G+  +A+ LFD M  K
Sbjct: 306 ILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSK 365

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKAN---------------------------------- 295
            +K   VTYN +    CK GEME+A                                   
Sbjct: 366 EMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLES 425

Query: 296 --KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
             +L ++M+ R + PN           C      EA  +W +M+ KG+   + + N +I 
Sbjct: 426 VVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIH 485

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G C   +   A E L  MV++G++ D+I+YN +I G  ++  +++A  L   M  +G  P
Sbjct: 486 GLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKP 545

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D   +N I+  +C  G+M ++  +L +M  +G+ PD  +Y T+I+G+    ++++A  + 
Sbjct: 546 DAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYL 605

Query: 474 DEMLQRGFVPD 484
           +E++  G  P+
Sbjct: 606 NELMACGLKPN 616



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 131/268 (48%), Gaps = 4/268 (1%)

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ-KSIKPDIVTYNTLI 282
           A D F+ +  R   P   T   L+    + GN+     +FD M   K++ P+  +Y ++I
Sbjct: 177 AVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMI 236

Query: 283 DGFCKVGEMEKANKLWADMISRKI--SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
              CKVG+++   K+ +D+I   +  S   + Y +L++  C  G V EA RL   M    
Sbjct: 237 KALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESR 296

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           + P++V+   +I G  RS    +    L +M   G+ P+ +  N LI+   R+ +  +A 
Sbjct: 297 VAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAI 356

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L  +M ++ +    +TYN+I    C++G M  +E IL  M+  G+      + +++ G 
Sbjct: 357 RLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGL 416

Query: 461 VSQNN-LKEAFRFHDEMLQRGFVPDDAF 487
           + +   L+   R   EM++RG  P+DA 
Sbjct: 417 LQRTGRLESVVRLISEMVKRGMKPNDAL 444



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 3/167 (1%)

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS-EGVDPDSIS 382
           G +  A   ++ +  +   P++ +CN +++   R+G+     +   +M   + V P+  S
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYS 231

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDV--ITYNVILTGFCRQGRMHDSELILWR 440
           Y ++I    +   +D  F ++S + + GL      + YN+++   C+ GR+ ++  +  R
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGR 291

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           M E  + P   T+  LING    +   E      EM   G  P++  
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVI 338


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 151/468 (32%), Positives = 245/468 (52%), Gaps = 8/468 (1%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           ALC+  + + A   L  M + G  PD V Y T+I+A C +G + EA  L+N M   G   
Sbjct: 184 ALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V T++ ++ G+C  GR   A  ++D M+  G  P   TY  LL   CR     EA  + 
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303

Query: 124 CEMSRRGVAPD--IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
                 G  P+  +V F+T+IG     G+L  A   +  M   G  PD   Y+I+++G C
Sbjct: 304 ------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G +  A+++  EM +KG   +VVTY  +L+  C+  M  +   L  EM  +G+  +  
Sbjct: 358 KLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  +I+  CKDG M++A+ L   M  +   PDI +YNT+I   C   +ME+A  ++ ++
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +   +  N I+Y  +I+     G   +A RL  EM+  G    +VS N +IK  C+ G+ 
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 537

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            ++   L +M  +G+ P+++SYN LI+   +E  +  A  L  +M NQGL PD++TYN +
Sbjct: 538 DRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL 597

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           + G C+ G MH +  +L ++  + ++PD  TY  LI+ H     L +A
Sbjct: 598 INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 220/436 (50%), Gaps = 31/436 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC    +  A   L EM   G   D  T++ ++   C  G + EA +L++ M  KG
Sbjct: 216 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 275

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-------------------------- 94
             PGV TY  L+ GLC+  + D A+ +L  + ++                          
Sbjct: 276 CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYE 335

Query: 95  -----GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
                G  PD  TY+ L+   C+   +S A  +  EM ++G AP++V+++ ++  F +NG
Sbjct: 336 TMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNG 395

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
             D       EM + GL  ++  Y  +I   C++G + EA+ +  EM  +GC  D+ +YN
Sbjct: 396 MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYN 455

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           TI+  LC  + + EA+ +F  +LE GV  +  T+ T+IH   +DG    A+ L   M   
Sbjct: 456 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH 515

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
               D+V+YN LI   CK G ++++  L  +M  + I PN +SY ILI+  C    V +A
Sbjct: 516 GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDA 575

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  +M+ +G+ P +V+ NT+I G C+ G    A   L K+ +E V PD I+YN LI+ 
Sbjct: 576 LELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISW 635

Query: 390 FVREENMDKAFALVSK 405
             +   +D A  L+++
Sbjct: 636 HCKVRLLDDAAMLLNR 651



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 240/479 (50%), Gaps = 8/479 (1%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D   D+  ++   + +  V P T T+     A CR G   EA  L+  M+  G  P    
Sbjct: 153 DCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVL 212

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y ++I+ LC +G    A  +L+EML MG + D  T++ ++   C    + EA  +   M 
Sbjct: 213 YQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMM 272

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD--NVLYTIIINGYCRNGF 185
            +G  P ++++  L+    R  Q D A    R M   G VP+   VL+  +I G    G 
Sbjct: 273 TKGCMPGVMTYGFLLQGLCRVRQADEA----RAM--LGRVPELNVVLFNTVIGGCLAEGK 326

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + EA ++ + M  KGC  D  TY+ +++GLC+   ++ A  L  EM ++G  P+  T+T 
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTI 386

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           ++H  CK+G  +    L + M+ K +  +   YN +I   CK G M++A  L  +M S+ 
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
            +P+  SY  +I   C+   + EA  ++  ++ +G+    ++ NTII    R G    A 
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
               +M+  G   D +SYN LI    ++ N+D++  L+ +M  +G+ P+ ++YN++++  
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C++ R+ D+  +  +M+ +GL PD  TY TLING      +  A    +++      PD
Sbjct: 567 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 204/436 (46%), Gaps = 33/436 (7%)

Query: 83  RAKEVLDEM-LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG-VAPDIVSFST 140
           RA  +LD++  + G+ P   +YN +L    R +  ++A  ++  M  R  V P   +F  
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
                 R G+ + AL   R M   G VPD VLY  +I+  C  G V EA  + +EML  G
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK-------- 252
           C  DV T++ ++ G+C    + EA  L + M+ +G  P   T+  L+ G C+        
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 253 -----------------------DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                                  +G + +A  L++ M  K  +PD  TY+ L+ G CK+G
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +  A +L  +M  +  +PN ++Y I+++ +C  G   +   L  EM  KG+       N
Sbjct: 361 RISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I   C+ G   +A   + +M S+G +PD  SYNT+I      E M++A  +   +  +
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+V + ITYN I+    R GR  D+  +   MI  G + D  +Y  LI       N+  +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540

Query: 470 FRFHDEMLQRGFVPDD 485
               +EM ++G  P++
Sbjct: 541 LVLLEEMAEKGIKPNN 556



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 152/303 (50%), Gaps = 26/303 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ ALCKD ++D A   + EM  +G  PD  +YNT+I   C    +EEA  +  ++  +G
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TYN++I+ L + GR   A  +  EM+  G S D  +YN L+   C+  N+  + 
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+ +G+ P+ VS++ LI    +  ++  AL   ++M + GL PD V Y  +ING 
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
           C+ G++  AL + +++  +    D++TYN +++  C+ ++L +A  L N  +        
Sbjct: 602 CKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGD 661

Query: 235 ----GVFPD----FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
                + PD     Y  T   + +C   N  KA    +I+ ++S         + ID   
Sbjct: 662 RRIMQILPDKNFKLYLHTKDSYLYCSRANECKA----NILLEQS--------TSFIDSAP 709

Query: 287 KVG 289
           KVG
Sbjct: 710 KVG 712


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 147/478 (30%), Positives = 244/478 (51%), Gaps = 3/478 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           L ++ +++    FL  M  KG  PD V    LI  +C+ G  + A ++M  +   G    
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
             +YN LIN  CK G  + A  VLD      ++P+ ATY+ +L   C +  + +A ++  
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
              +    PD+V+ + LI    +   + +A+  F EM+  G  PD V Y ++I G+C+ G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA+    ++   GC  DV+++N IL  LC      +A  L   ML +G FP   TF 
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI+  C+ G + KALN+ ++M +    P+  ++N LI GFC    +++A +    M+SR
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR 375

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y IL+   C  G V +A  +  ++  KG  P+L+S NT+I G  + G A  A
Sbjct: 376 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 435

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E L +M  +G+ PD I+  +++ G  RE  + +A      ++  G+ P+   YN I+ G
Sbjct: 436 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMG 495

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            C+  +   +   L  M+  G  P  ++YTTLI G   +   +EA +  +E+  RG V
Sbjct: 496 LCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLV 553



 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 242/446 (54%), Gaps = 3/446 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +  +A   +  +E+ G   D  +YN LINAYC+ G +EEA ++++  S   
Sbjct: 110 LIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTS--- 166

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TY++++  LC +G+  +A +VLD  LQ    PD  T   L+  +C++  + +A 
Sbjct: 167 VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 226

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  +G  PD+V+++ LI  F + G+LD A+++ +++ S G   D + + +I+   
Sbjct: 227 KLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSL 286

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G  ++A+K+   ML KGC   VVT+N ++N LC+  +L +A ++   M + G  P+ 
Sbjct: 287 CSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 346

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +F  LI G C    +++A+   +IM  +   PDIVTYN L+   CK G+++ A  + + 
Sbjct: 347 RSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 406

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+  SP+ ISY  +I+G   +G    A  L  EM  KG+KP L++C +++ G  R G 
Sbjct: 407 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 466

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +F   +   G+ P++  YN+++ G  + +    A   +  M   G  P   +Y  
Sbjct: 467 VHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTT 526

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           ++ G   +G   ++  +   +  +GL
Sbjct: 527 LIKGITYEGLAEEASKLSNELYSRGL 552



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 196/373 (52%), Gaps = 3/373 (0%)

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           R   + E       M+ +G  PD+V+ + LI  F + G+   A      ++ +G V D  
Sbjct: 81  RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            Y ++IN YC++G + EAL++ D         +  TY+ +L  LC    L +A  + +  
Sbjct: 141 SYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           L+   +PD  T T LI   CK+  + +A+ LF+ M  K  KPD+VTYN LI GFCK G +
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           ++A      + S     + IS+ +++   CS G   +A +L   M+ KG  P++V+ N +
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I   C+ G   KA   L  M   G  P+S S+N LI GF   + +D+A   +  M ++G 
Sbjct: 318 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGC 377

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            PD++TYN++LT  C+ G++ D+ +IL ++  KG +P   +Y T+I+G +     + A  
Sbjct: 378 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 437

Query: 472 FHDEMLQRGFVPD 484
             +EM  +G  PD
Sbjct: 438 LLEEMCYKGLKPD 450



 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 191/378 (50%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LC   K+  A   L    Q   YPD VT   LI+A C+E  + +A +L N M GKG KP
Sbjct: 180 SLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKP 239

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V TYN LI G CK+GR D A   L ++   G   D  ++N +L   C      +A ++ 
Sbjct: 240 DVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLL 299

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
             M R+G  P +V+F+ LI    + G L +AL     M   G  P++  +  +I G+C  
Sbjct: 300 ATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNR 359

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
             +  A++  + M+ +GC  D+VTYN +L  LC+   + +A  + +++  +G  P   ++
Sbjct: 360 KGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISY 419

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            T+I G  K G    A+ L + M  K +KPD++T  +++ G  + G++ +A K +  +  
Sbjct: 420 NTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKG 479

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             I PN   Y  ++ G C     + A     +MV  G KPT  S  T+IKG    G A +
Sbjct: 480 FGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEE 539

Query: 364 ADEFLSKMVSEGVDPDSI 381
           A +  +++ S G+   S+
Sbjct: 540 ASKLSNELYSRGLVKKSL 557



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 93/175 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCKD K+D A + L ++  KG  P  ++YNT+I+   + G  E A +L+  M  KG
Sbjct: 387 LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG 446

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP + T  S++ GL ++G+   A +    +   G+ P+   YN++++  C+ +  S A 
Sbjct: 447 LKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAI 506

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +   +M   G  P   S++TLI   +  G  + A     E+ S GLV  +++  +
Sbjct: 507 DFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLIVKV 561


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 138/415 (33%), Positives = 226/415 (54%), Gaps = 3/415 (0%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
             YN+++ G C  G+ D A+ ++ EM    + PD  TYNTL+   C +   + A  +  E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M RR   PD+V+++ L+    +     +A+    EM+  G  PD V Y +++NG C+ G 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V +A++    +   GC  + V+YN +L GLC A+   +A++L  EM ++G  P+  TF  
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI   C+ G +  AL + + + +    P+ ++YN L+  FCK  +M+KA      M+SR 
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ +SY  L+   C  G V  A  L +++  KG  P L+S NT+I G  ++G   +A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E L++MVS+G+ PD I+Y+T+  G  RE+ ++ A     K+++ G+ P+ + YN I+ G 
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           C++   H +  +   MI  G  P+ STYT LI G   +  +KEA    DE+  R 
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 225/415 (54%), Gaps = 3/415 (0%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           + YN ++  YC  G L+ A +L+  M    ++P  +TYN+LI GLC +GR   A  VLDE
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML+    PD  TY  LL  +C++    +A ++  EM  +G  PDIV+++ ++    + G+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D A+ + + + S G  P+ V Y I++ G C      +A ++  EM +KGC  +VVT+N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +++ LCR  ++  A ++  ++ + G  P+  ++  L+H  CK   M+KA+   D+M  + 
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
             PDIV+YNTL+   C+ GE++ A +L   +  +  +P  ISY  +I+G    G   EA 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L  EMV KG++P +++ +TI  G CR      A     K+   G+ P+++ YN +I G 
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
            +      A  L + M   G +P+  TY +++ G   +G + ++  +L  +  + 
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 201/375 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +  +A   L EM ++   PD VTY  L+ A C+    ++A +L++ M  KG
Sbjct: 38  LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 97

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN ++NG+C++GR D A E L  +   G  P+T +YN +L   C  E   +AE
Sbjct: 98  CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 157

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM ++G  P++V+F+ LI    R G ++ AL    ++   G  P+++ Y  +++ +
Sbjct: 158 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 217

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A+   D M+ +GC  D+V+YNT+L  LCR+  +  A +L +++ ++G  P  
Sbjct: 218 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 277

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ T+I G  K G   +AL L + M  K ++PDI+TY+T+  G C+   +E A + +  
Sbjct: 278 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 337

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    I PN + Y  +I G C       A  L+  M+G G  P   +   +I+G    G 
Sbjct: 338 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 397

Query: 361 ASKADEFLSKMVSEG 375
             +A + L ++ S  
Sbjct: 398 IKEARDLLDELCSRA 412



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 193/351 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A CK      A   L EM  KG  PD VTYN ++N  C+EG +++A + + ++   G
Sbjct: 73  LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 132

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   +YN ++ GLC   R + A+E++ EM Q G  P+  T+N L+   CRK  +  A 
Sbjct: 133 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 192

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  ++ + G  P+ +S++ L+  F +  ++D+A+ +   M S G  PD V Y  ++   
Sbjct: 193 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 252

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G V  A+++  ++ +KGC   +++YNT+++GL +A    EA +L NEM+ +G+ PD 
Sbjct: 253 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 312

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++T+  G C++  +  A+  F  +    I+P+ V YN +I G CK  E   A  L+A 
Sbjct: 313 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 372

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           MI     PN  +Y ILI G    G + EA  L  E+  +  +  L+  + I
Sbjct: 373 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLI 423



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           + YN ++ G+C  G++  +  ++  M    + PD  TY TLI G   +     A    DE
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 476 MLQRGFVPD 484
           ML+R  VPD
Sbjct: 58  MLRRRCVPD 66


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 152/482 (31%), Positives = 244/482 (50%), Gaps = 1/482 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C+      +   L  M +KG  PD +    LI  +     + +A ++M  +   G +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
           F YN+LING CK  R D A  VLD M     SPDT TYN ++   C +  +  A ++  +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           +      P +++++ LI      G +D AL    EM S GL PD   Y  II G C+ G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V  A +M   +  KG   DV++YN +L  L       E + L  +M      P+  T++ 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI   C+DG + +A+NL  +M +K + PD  +Y+ LI  FC+ G ++ A +    MIS  
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ ++Y  ++   C  G   +A  ++ ++   G  P   S NT+      SGD  +A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
             + +M+S G+DPD I+YN++I+   RE  +D+AF L+  M +    P V+TYN++L GF
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C+  R+ D+  +L  M+  G  P+ +TYT LI G        EA    +++++   + + 
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY 578

Query: 486 AF 487
           +F
Sbjct: 579 SF 580



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 204/372 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ +LC   K+D A   L ++      P  +TY  LI A   EG ++EA +LM+ M  +G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP +FTYN++I G+CK+G  DRA E++  +   G  PD  +YN LL     +    E E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGE 318

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M      P++V++S LI    R+G+++ A+   + MK  GL PD   Y  +I  +
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A++  + M+  GC+ D+V YNT+L  LC+     +A ++F ++ E G  P+ 
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ T+       G+  +AL++   M    I PD +TYN++I   C+ G +++A +L  D
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S +  P+ ++Y I++ G+C    + +A  +   MVG G +P   +   +I+G   +G 
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558

Query: 361 ASKADEFLSKMV 372
            ++A E  + +V
Sbjct: 559 RAEAMELANDLV 570



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 205/407 (50%), Gaps = 4/407 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK ++ID A   L  M  K   PDTVTYN +I + C  G L+ A +++N +    
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY  LI     +G  D A +++DEML  GL PD  TYNT++   C++  +  A 
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   +  +G  PD++S++ L+      G+ +       +M S    P+ V Y+I+I   
Sbjct: 284 EMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G + EA+ +   M EKG   D  +Y+ ++   CR   L  A +    M+  G  PD 
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + T++   CK+G  ++AL +F  + +    P+  +YNT+       G+  +A  +  +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  I P+ I+Y  +I+  C  G V EAF L  +M      P++V+ N ++ G+C++  
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF----VREENMDKAFALV 403
              A   L  MV  G  P+  +Y  LI G      R E M+ A  LV
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 190/376 (50%), Gaps = 1/376 (0%)

Query: 110 SCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD 169
           SCR  N  E+  +   M R+G  PD++  + LI  F     + +A+     ++  G  PD
Sbjct: 99  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPD 157

Query: 170 NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
              Y  +ING+C+   + +A ++ D M  K    D VTYN ++  LC    L  A  + N
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
           ++L     P   T+T LI     +G +++AL L D M  + +KPD+ TYNT+I G CK G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +++A ++  ++  +   P+ ISY IL+    + G   E  +L  +M  +   P +V+ +
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I   CR G   +A   L  M  +G+ PD+ SY+ LI  F RE  +D A   +  M + 
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G +PD++ YN +L   C+ G+   +  I  ++ E G +P+ S+Y T+ +   S  +   A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 470 FRFHDEMLQRGFVPDD 485
                EM+  G  PD+
Sbjct: 458 LHMILEMMSNGIDPDE 473



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 169/309 (54%), Gaps = 1/309 (0%)

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           I +  CR+G  +E+L + + M+ KG   DV+    ++ G    + + +A  +  E+LE+ 
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             PD + +  LI+G CK   ++ A  + D M  K   PD VTYN +I   C  G+++ A 
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           K+   ++S    P  I+Y ILI      G V EA +L  EM+ +G+KP + + NTII+G 
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+ G   +A E +  +  +G +PD ISYN L+   + +   ++   L++KM ++   P+V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           +TY++++T  CR G++ ++  +L  M EKGL PD  +Y  LI     +  L  A  F + 
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 476 MLQRGFVPD 484
           M+  G +PD
Sbjct: 394 MISDGCLPD 402



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 52/94 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LC++  +D A   L +M     +P  VTYN ++  +C+   +E+A  ++ SM G G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            +P   TY  LI G+   G    A E+ ++++++
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 262/483 (54%), Gaps = 6/483 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK+ ++D+A+  L EM  KG  PD V+Y T++++ CR G +EEA +L  SM  K 
Sbjct: 184 LLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKS 241

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    YN+LING C++ + +   E+ +EM   G+ PD  TY+T++       N+  A 
Sbjct: 242 FVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMAL 298

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  RG +P++ +F++L+  +   G+L  AL  +  M   G  P+ V Y  +I+G 
Sbjct: 299 AVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGL 358

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G ++EA+ +  +M   G   +  TY+T+++G  +A  L  A +++N+M+  G  P+ 
Sbjct: 359 CSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNV 418

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T ++   C++   N AL+L + M   +  P+ +T+NT I G C  G+ E A K+   
Sbjct: 419 VVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQ 478

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     +PN  +Y  +++G  +     EA ++  E+    IK  LV+ NTI+ G+C +G 
Sbjct: 479 MRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGM 538

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL-VPDVITYN 419
              A +   K++  G  PDSI+YNT+I  + ++  +  A  LV ++  +G   PDV TY 
Sbjct: 539 FKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYT 598

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L G C    + ++ + L +MI +G+ P+R+T+  L+ G  S+          D +L  
Sbjct: 599 SLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNILAN 658

Query: 480 GFV 482
           G V
Sbjct: 659 GKV 661



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 233/463 (50%), Gaps = 5/463 (1%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G  P    YN +++A   E   +    + N+M   G++  V+TYN L+  LCK  R D A
Sbjct: 138 GCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAA 197

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           +++L EM   G  PD  +Y T++   CR   + EA E+   M  +   P    ++ LI  
Sbjct: 198 RKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VYNALING 252

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F R  +++     F EM   G+ PD + Y+ +IN     G V  AL +  +M  +GC  +
Sbjct: 253 FCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPN 312

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           V T+ +++ G      L EA DL+N M++ G  P+   + TLIHG C  G M +A+++  
Sbjct: 313 VHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQ 372

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +  + P+  TY+TLIDGF K G++  A+++W  MI+    PN + Y  +++  C   
Sbjct: 373 KMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNS 432

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               A  L   M      P  ++ NT IKG C SG    A + L++M   G  P+  +YN
Sbjct: 433 MFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYN 492

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            +++G    +   +A  +V ++E   +  +++TYN IL+GFC  G    +  I  +++  
Sbjct: 493 EVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVG 552

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           G  PD  TY T+I  +  Q  +K A +  D + ++G    D F
Sbjct: 553 GTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVF 595



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 249/487 (51%), Gaps = 6/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL  ++K          M++ G+  +  TYN L+ A C+   ++ A +L+  MS KG
Sbjct: 149 VLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKG 208

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   +Y ++++ +C+ G+ + A+E     L M +      YN L+   CR+  M E  
Sbjct: 209 CIPDAVSYTTVVSSMCRLGKVEEARE-----LSMRIKSFVPVYNALINGFCREHKMEEVF 263

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F EM+  G+ PD++++ST+I   S  G ++ AL    +M   G  P+   +T ++ GY
Sbjct: 264 ELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGY 323

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + EAL + + M+++G   + V YNT+++GLC    + EA  +  +M   GVFP+ 
Sbjct: 324 FMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNE 383

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI G  K G++  A  +++ M      P++V Y  ++D  C+      A  L  +
Sbjct: 384 TTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIEN 443

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +    PN I++   I G C  G    A ++  +M   G  P + + N ++ G   +  
Sbjct: 444 MANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKR 503

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A + + ++    +  + ++YNT+++GF        A  +  K+   G  PD ITYN 
Sbjct: 504 TREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNT 563

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLN-PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++  +C+QG +  +  ++ R+ +KG   PD  TYT+L+ G  +   + EA    D+M+  
Sbjct: 564 VIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINE 623

Query: 480 GFVPDDA 486
           G  P+ A
Sbjct: 624 GICPNRA 630



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 10/479 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDT-VTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++N L  +  I  A  F   +     +  T +TY T+I     E  ++    L+  M  +
Sbjct: 43  VLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLE 102

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+      +  +IN   + G  ++A +    + + G  P    YN +L     +      
Sbjct: 103 GISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMI 162

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             I+  M R G+  ++ +++ L+    +N ++D A     EM   G +PD V YT +++ 
Sbjct: 163 NGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSS 222

Query: 180 YCRNGFVLEA--LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            CR G V EA  L MR +         V  YN ++NG CR   + E  +LFNEM   G+ 
Sbjct: 223 MCRLGKVEEARELSMRIKSF-------VPVYNALINGFCREHKMEEVFELFNEMAVEGID 275

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T++T+I+   + GN+  AL +   M  +   P++ T+ +L+ G+   G + +A  L
Sbjct: 276 PDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDL 335

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           W  MI     PN ++Y  LI+G CS G + EA  +  +M   G+ P   + +T+I G+ +
Sbjct: 336 WNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAK 395

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +GD   A E  +KM++ G  P+ + Y  +++   R    + A  L+  M N    P+ IT
Sbjct: 396 AGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTIT 455

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +N  + G C  G+   +  +L +M + G  P+ +TY  +++G  +    +EA +   E+
Sbjct: 456 FNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEI 514



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 176/349 (50%), Gaps = 5/349 (1%)

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           ++++T+I        +D      + MK  G+  +  L+ I+IN Y R G   +ALK    
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           + E GC   V  YN +L+ L         + ++N M   G+  + YT+  L+   CK+  
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           ++ A  L   M+ K   PD V+Y T++   C++G++E+A +L     S +I      Y  
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL-----SMRIKSFVPVYNA 248

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LING+C    + E F L+ EM  +GI P +++ +T+I      G+   A   L+KM   G
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG 308

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             P+  ++ +L+ G+     + +A  L ++M  +G  P+ + YN ++ G C  G+M ++ 
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAV 368

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  +M   G+ P+ +TY+TLI+G     +L  A    ++M+  G +P+
Sbjct: 369 SVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPN 417



 Score = 38.5 bits (88), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%)

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
           K T ++  T+IK      D       L  M  EG+  +   +  +IN + R    ++A  
Sbjct: 70  KHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALK 129

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
              ++   G  P V  YN +L     + +      I   M   G+  +  TY  L+    
Sbjct: 130 TFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALC 189

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
             + +  A +   EM  +G +PD
Sbjct: 190 KNDRVDAARKLLAEMSYKGCIPD 212


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  270 bits (691), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 154/486 (31%), Positives = 261/486 (53%), Gaps = 4/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +++ A+  +  M +K ++ D   Y  LI+AYC  G +++A ++ ++M   G
Sbjct: 332 LIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVG 391

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK      NSLING CK G  ++A EVL  M    L PD+  YNTLL   C++E+  +A 
Sbjct: 392 LKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAF 451

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  +GV   +V+++TL+      G ++ AL  +  M   G+ P+ V Y  +++ +
Sbjct: 452 KLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAF 511

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A+ +  + L KG    +  YNT++ G C+ + L +A ++F +M E G  PD 
Sbjct: 512 FKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDE 571

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G+CK GN+ +AL L D+  +  I      YN+LI G  +  E++K N L A+
Sbjct: 572 ITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAE 631

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +R++SPN ++YG LI G+C  G + +A+  +++M+ KGI P ++  + I+    R G 
Sbjct: 632 MKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGK 691

Query: 361 ASKADEFLSKMVSEGVDPDSISYNT--LINGFVREENMDKAFALVSKMENQGLVPDVITY 418
             +A+  L ++    +DP +   ++  L    +R     K      K      + + I Y
Sbjct: 692 IDEANLILHQIAD--IDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVY 749

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N+ +TG C+   + D   IL  ++ KG  PD  TY +LI+   +   + EAF   D+M+ 
Sbjct: 750 NIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMIN 809

Query: 479 RGFVPD 484
            G VP+
Sbjct: 810 AGLVPN 815



 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/450 (30%), Positives = 243/450 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M   G+ PD  +Y  ++NAYC+EG ++EAF  +  M     +P V TYNSLI+G    G
Sbjct: 246 QMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLG 305

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
               AK+VL  M + G+  ++ TY  L+   C++  M +AE++   M  + +  D   + 
Sbjct: 306 DVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYG 365

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI  +   G++D AL     M   GL  + V+   +INGYC+ G V +A ++   M + 
Sbjct: 366 VLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDW 425

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               D   YNT+L+G C+ +   +A  L +EM  +GV     T+ TL+      G++  A
Sbjct: 426 NLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA 485

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L+++++M ++ + P+ VTY TL+D F KVG  ++A  +W D +S+  + +   Y  +I G
Sbjct: 486 LHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICG 545

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C M  + +A  ++ +M   G  P  ++  T+I GYC+ G+  +A +       +G+   
Sbjct: 546 FCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSS 605

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +  YN+LI G  R E + K   L+++M+N+ L P+V+TY  ++ G+C +G M  +    +
Sbjct: 606 TEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYF 665

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           +MI+KG+ P+    + +++       + EA
Sbjct: 666 KMIDKGIAPNIIIGSKIVSSLYRHGKIDEA 695



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 242/473 (51%), Gaps = 3/473 (0%)

Query: 15  KMFLC---EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           K  LC    M + G  P   + N+L++   + G   +A  +   M   G+ P +F+Y  +
Sbjct: 203 KFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIM 262

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           +N  CK+GR D A   + EM +    P+  TYN+L+       ++  A+++   MS +G+
Sbjct: 263 VNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGI 322

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
             +  +++ LI  + + GQ+++A      M    L  D  +Y ++I+ YC  G V +AL+
Sbjct: 323 PENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALR 382

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +RD ML+ G  M+ V  N+++NG C+   + +A ++   M +  + PD Y + TL+ G C
Sbjct: 383 IRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFC 442

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K  +  KA  L D M  K +   +VTYNTL+     VG +E A  +W  M  R ++PN +
Sbjct: 443 KQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEV 502

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  L++ +  +G    A  +W + + KG   ++   NT+I G+C+     +A E   KM
Sbjct: 503 TYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM 562

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
              G  PD I+Y TLI+G+ +  N+ +A  L    E  G+      YN ++TG  R   +
Sbjct: 563 KELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEEL 622

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                +L  M  + L+P+  TY +LI G   +  + +A+  + +M+ +G  P+
Sbjct: 623 QKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPN 675



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/551 (28%), Positives = 273/551 (49%), Gaps = 72/551 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A C   ++D A      M + G+  +TV  N+LIN YC+ G + +A +++ SM    
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN 426

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  + YN+L++G CK+    +A ++ DEM   G++    TYNTLL       ++  A 
Sbjct: 427 LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHAL 486

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-------------------- 160
            I+  M +RGVAP+ V++ TL+  F + G  DRA+M +++                    
Sbjct: 487 HIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGF 546

Query: 161 ---------------MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                          MK  G  PD + Y  +I+GYC+ G ++EALK++D     G     
Sbjct: 547 CKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSST 606

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN+++ G+ R++ L + + L  EM  R + P+  T+ +LI G C  G M+KA N +  
Sbjct: 607 EMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFK 666

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW---ADM--------------------- 301
           M  K I P+I+  + ++    + G++++AN +    AD+                     
Sbjct: 667 MIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLE 726

Query: 302 ------------ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
                       +S  IS N I Y I I G C   ++ +  R+  +++ KG  P   +  
Sbjct: 727 TQKIVDSFGKKAMSIPISNN-IVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYC 785

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           ++I      G  ++A      M++ G+ P+ + YN LING  +  N+D+A  L +K+  +
Sbjct: 786 SLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARK 845

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           GL P V+TYN ++ G+C+ GR  ++  +  +M E+G+ P   TY+TLI+G   +   +++
Sbjct: 846 GLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQS 905

Query: 470 FRFHDEMLQRG 480
               +EM++ G
Sbjct: 906 VGLLNEMMKAG 916



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 264/520 (50%), Gaps = 35/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNA CK+ ++D A  F+ EME+    P+ VTYN+LI+ Y   G +  A +++  MS KG
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG 321

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY  LI G CK+G+ ++A++++  M++  L  D   Y  L+   C    + +A 
Sbjct: 322 IPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDAL 381

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M + G+  + V  ++LI  + + G +++A      MK   L PD+  Y  +++G+
Sbjct: 382 RIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGF 441

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+    ++A K+ DEM  KG    VVTYNT+L  L     +  A  ++N M +RGV P+ 
Sbjct: 442 CKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNE 501

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TL+    K G  ++A+ ++     K     I  YNT+I GFCK+ ++ +A +++  
Sbjct: 502 VTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLK 561

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P+ I+Y  LI+GYC +G++ EA +L       GI  +    N++I G  RS +
Sbjct: 562 MKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEE 621

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K +  L++M +  + P+ ++Y +LI G+  +  MDKA+    KM ++G+ P++I  + 
Sbjct: 622 LQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSK 681

Query: 421 ILTGFCRQGRMHDSELILWRMIE--------------------------------KGLNP 448
           I++   R G++ ++ LIL ++ +                                K ++ 
Sbjct: 682 IVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSI 741

Query: 449 DRS---TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             S    Y   I G     N+ +  R   ++L +GF PD+
Sbjct: 742 PISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDN 781



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 229/456 (50%), Gaps = 4/456 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAF--QLMNSMSGKGLKPGVFTYNSLINGLCKK 78
           + +  +Y +   Y   +   C+  ++  A   +L++        P VF  + ++    +K
Sbjct: 142 LSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVF--DMILKVFAEK 199

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           G    A  V D M + G  P   + N+LL    +     +A  ++ +M   G+ PDI S+
Sbjct: 200 GMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSY 259

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + ++  + + G++D A  + +EM+ +   P+ V Y  +I+GY   G V  A K+   M E
Sbjct: 260 TIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSE 319

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
           KG   +  TY  ++ G C+   + +A+ L   M+E+ +F D + +  LIH +C  G ++ 
Sbjct: 320 KGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDD 379

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           AL + D M +  +K + V  N+LI+G+CK+G + KA ++   M    + P+   Y  L++
Sbjct: 380 ALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLD 439

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G+C      +AF+L  EM  KG+  T+V+ NT++K     G    A    + M   GV P
Sbjct: 440 GFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAP 499

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           + ++Y TL++ F +    D+A  +     ++G    +  YN ++ GFC+  ++  ++ I 
Sbjct: 500 NEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIF 559

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +M E G  PD  TY TLI+G+    NL EA +  D
Sbjct: 560 LKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKD 595



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 160/403 (39%), Gaps = 126/403 (31%)

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEML------------------------------- 232
           DV +Y  I++ L RA+M  E     NE++                               
Sbjct: 131 DVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFD 190

Query: 233 -------ERGV----------------FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
                  E+G+                 P   +  +L+    ++G   KAL +++ M   
Sbjct: 191 MILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIAL 250

Query: 270 SIKPDI-----------------------------------VTYNTLIDGF--------- 285
            I PDI                                   VTYN+LIDG+         
Sbjct: 251 GILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGA 310

Query: 286 --------------------------CKVGEMEKANKLWADMISRKISPNYISYGILING 319
                                     CK G+ME+A KL   M+ + +  +   YG+LI+ 
Sbjct: 311 KKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHA 370

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           YC+ G V +A R+   M+  G+K   V CN++I GYC+ G  +KA E L  M    + PD
Sbjct: 371 YCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPD 430

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           S  YNTL++GF ++E+  KAF L  +M N+G+   V+TYN +L      G +  + L +W
Sbjct: 431 SYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA-LHIW 489

Query: 440 RMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            ++ K G+ P+  TY TL++          A     + L +GF
Sbjct: 490 NLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGF 532


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 153/490 (31%), Positives = 253/490 (51%), Gaps = 8/490 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEME---QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++ ALC+    D A   L  M         P+ V+Y  L+ A C +   ++A  L+ SM 
Sbjct: 83  VLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMR 142

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             G++  V TY +LI GLC     D+A E++ EM + G+ P+   Y++LL   C+     
Sbjct: 143 SAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWE 202

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +  ++F EMS +G+ PD+V ++ LI    + G+  +A      M   GL P+ V Y ++I
Sbjct: 203 DVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLI 262

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-- 235
           N  C+ G V EA+ +  +M EKG   DVVTYNT++ GL     + EA  L  EM+ RG  
Sbjct: 263 NCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKN 321

Query: 236 -VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            V P+  TF ++I G C  G M +A  +  +M +     ++VTYN LI G  +V ++ KA
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKA 381

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L  +M S  + P+  +Y ILI G+C M  V  A  L   M  +GI+P L     ++  
Sbjct: 382 MELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVA 441

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C  G   +A    ++M       D ++Y+T+I+G  +  ++  A  L+  + ++GL PD
Sbjct: 442 MCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPD 500

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +TY++++  F + G M  +  +L +M   G  PD + + +LI G+ ++  + +      
Sbjct: 501 AVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIR 560

Query: 475 EMLQRGFVPD 484
           EM+ +    D
Sbjct: 561 EMITKNIALD 570



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 249/464 (53%), Gaps = 6/464 (1%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMS---GKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           D V+YNT++ A CR G  + A  L+ +MS       +P   +Y  L+  LC     D+A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L  M   G+  D  TY TL+   C    + +A E+  EM   G+ P++V +S+L+  +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            ++G+ +     F EM   G+ PD V+YT +I+  C+ G   +A  + D M+ +G   +V
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYN ++N +C+   + EA  +  +M E+GV PD  T+ TLI G      M++A+ L + 
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 266 MTQKS--IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           M +    +KP++VT+N++I G C +G M +A ++ A M       N ++Y +LI G   +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             V +A  L  EM   G++P   + + +IKG+C+     +A++ LS M   G++P+   Y
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
             L+     +  M++A  L ++M+N     DV+ Y+ ++ G C+ G +  ++ +L  +++
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           +GL PD  TY+ +IN      +++ A     +M   GF+PD A 
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAV 538



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 150/285 (52%), Gaps = 7/285 (2%)

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEM-LE--RGVFPDFYTFTTLIHGHCKDGNMNK 258
           V D V+YNT+L  LCR      A  L   M LE      P+  ++T L+   C D   ++
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+ L   M    ++ D+VTY TLI G C   E++KA +L  +M    I PN + Y  L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           GYC  G   +  +++ EM  KGI+P +V    +I   C+ G A KA   +  MV  G++P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           + ++YN LIN   +E ++ +A  ++ KM  +G+ PDV+TYN ++ G      M ++  +L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 439 WRMIEKGLN---PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             M+ +G N   P+  T+ ++I G      +++AF+    M + G
Sbjct: 314 EEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 246/455 (54%), Gaps = 6/455 (1%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           +++N L+ A  +     + F L   M   GL P  FT N LIN LC   R       +  
Sbjct: 92  ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAG 151

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           +++ G  PD  TY +L+   C +  +SEA  +F  M + G  P++V++ TLI    R G 
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 211

Query: 151 LDRALMYFREM------KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           ++ AL   +EM       +    P+   Y III+  C+ G   EA ++ +EM+++G   D
Sbjct: 212 INLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPD 271

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VVT++ +++ LC+  M+ EA      M+ RG+ PD +TFT+LI G C  G+++ A  LF 
Sbjct: 272 VVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K  +PD+++Y  LI G+CK   +E+A KL+ +M+     P+  ++ +L+ G    G
Sbjct: 332 SMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAG 391

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A +L+  +    +   L  C+  + G C++G   +A E  +++ S  +  D  S+N
Sbjct: 392 KVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFN 451

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI+G  +   ++ A+ L  K+  +GL PDV+TY +++ GFC+ G++ ++ ++   M E 
Sbjct: 452 CLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEEN 511

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           G  P+  TY+ L++G    N L+E  +   +M+Q+
Sbjct: 512 GCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 240/466 (51%), Gaps = 10/466 (2%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M   G+ P+  T N LIN  C    + E    M  +  +G  P V TY SLI GLC + 
Sbjct: 116 KMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEH 175

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM----SRRGV--AP 133
           R   A  +   M ++G  P+  TY TL+   CR  N++ A ++  EM    S   +   P
Sbjct: 176 RISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKP 235

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           +I S++ +I    + G+   A   F EM   G+ PD V ++ +I+  C+ G V+EA K  
Sbjct: 236 NIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFL 295

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           + M+ +G V D+ T+ +++ G C    L  A +LF  M  +G  PD  ++T LI+G+CK 
Sbjct: 296 ETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT 355

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
            N+ +A+ L++ M +    PD+ T+  L+ G    G++  A KL+  +    +  N    
Sbjct: 356 FNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYIC 415

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
            + ++G C  G + EA  L+ E+    +K  + S N +I G C++     A E   K+  
Sbjct: 416 SVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQ 475

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
           EG+ PD ++Y  +INGF +   +D A  L   ME  G  P+++TY+ +L GF +  ++ +
Sbjct: 476 EGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEE 535

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
              +L +MI+K ++   S Y T++   VS++   E  R   ++LQR
Sbjct: 536 VVKLLHKMIQKDVSLAASIY-TIVEDMVSKD---EKCREWLDILQR 577



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 223/415 (53%), Gaps = 6/415 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL----MNSM 56
           ++  LC +H+I  A      M++ G +P+ VTY TLI   CR G +  A +L    +N  
Sbjct: 167 LIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGT 226

Query: 57  SGKGL--KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
           S   +  KP +F+YN +I+ LCK G+   AK + +EM+  G+ PD  T++ L+   C++ 
Sbjct: 227 SPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEG 286

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            + EA++    M  RG+ PD+ +F++LI  F   G LD A   F  M S G  PD + YT
Sbjct: 287 MVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYT 346

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I GYC+   V EA+K+ +EML  G   D+ T+  +L GL  A  + +A  LF  +   
Sbjct: 347 VLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPH 406

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            V  + Y  +  + G CK+G + +A+ LF+ +   ++K DI ++N LIDG CK  ++E A
Sbjct: 407 AVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETA 466

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L+  +    + P+ ++Y I+ING+C  G V  A  L+  M   G  P L++ + ++ G
Sbjct: 467 WELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHG 526

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           + ++    +  + L KM+ + V   +  Y  + +   ++E   +   ++ +   Q
Sbjct: 527 FYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRFPVQ 581



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 5/158 (3%)

Query: 321 CSMGHVTEAFRL-WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           C  G++T    L +++++ + I    +S N ++    +    S+      KM   G+ P+
Sbjct: 70  CKKGNITSTQALQFFDLMMRSI----ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPN 125

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             + N LIN       + +  + ++ +  +G +PDV+TY  ++ G C + R+ ++  +  
Sbjct: 126 FFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFI 185

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           RM + G  P+  TY TLI G     N+  A + H EML
Sbjct: 186 RMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEML 223


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 147/486 (30%), Positives = 251/486 (51%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  K + +  FL  +  KG  PD V    LI  +     L++A ++M  +   G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V++YN++I+G  K  + D A +V D M   G SPD  TYN ++   C +  +  A 
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  E+ + G  P +++++ LI      G+++ AL  F E+ S GL PD   Y  II G 
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    AL     +  +GC  DVV+YN +L          + + L  +M+  G  P+ 
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T + LI   C++G + +A+N+ ++M +K + PD  +Y+ LI  FCK G ++ A +    
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S    P+ ++Y  ++   C  G    A  ++ ++   G  PT+ + NT+       G+
Sbjct: 367 MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGN 426

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA E +S+M+ +G+DPD I+YN+LI+   R+  +D+A  L+  ME     P VI++N+
Sbjct: 427 KIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNI 486

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C+  R+ +   +L  M+EKG  P+ ++Y  LI G        EA    + + + G
Sbjct: 487 VLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLG 546

Query: 481 FVPDDA 486
            +  D+
Sbjct: 547 VISGDS 552


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 143/433 (33%), Positives = 234/433 (54%), Gaps = 9/433 (2%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGR----CDRAKEVLDEMLQMGLSPDTATYNTLLVESC 111
           +  K L    +  N L+  L K  +    C  A   L  +     +P+   Y  L++  C
Sbjct: 69  VGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLC 126

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           + E + EA  ++    + G A  I + + L+ +  + G+ +     + EM S GL P  +
Sbjct: 127 KMELVEEALSMY---HKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVI 183

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            +  +I+G CR G +L A +M DEM  KG V  V+ Y  ++ GLC    + EA+ +   M
Sbjct: 184 TFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAM 243

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
            E GV+P+ YT+ TL+ G+CK  N  +AL L+  M  + + PD+VT+  LIDG CK GEM
Sbjct: 244 REVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEM 303

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           + A  L+ +MI   ++PN   Y  LI+ YC +G V+EA  L+ E+    + P + + + +
Sbjct: 304 KAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSIL 363

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I+G C      +A     KM  EG+  +S++YN+LI+G  +E  MDKA  + S+M   G+
Sbjct: 364 IRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            P+VIT++ ++ G+C+   +  +  I   M+ K L+PD  TYT +I+GH    ++KEA +
Sbjct: 424 EPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK 483

Query: 472 FHDEMLQRGFVPD 484
            + +ML  G  P+
Sbjct: 484 LYSDMLDNGITPN 496



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 250/463 (53%), Gaps = 15/463 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM   G+ P  +T+ TLI+  CR+G L  A ++ + M  KG+ P V  Y  LI GLC   
Sbjct: 172 EMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDN 231

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + + A+ +   M ++G+ P+  TYNTL+   C+  N  +A  ++ +M   G+ PD+V+F 
Sbjct: 232 KIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFG 291

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI    + G++  A   F  M    + P+  +Y  +I+ YC+ G V EA+ +  E+   
Sbjct: 292 ILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERF 351

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               DV TY+ ++ GLC      EA ++F +M + G+  +  T+ +LI G CK+G M+KA
Sbjct: 352 EVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKA 411

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L +   MT+  ++P+++T++TLIDG+CK+  ++ A  ++++M+ + +SP+ ++Y  +I+G
Sbjct: 412 LEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDG 471

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV------- 372
           +C  G + EA +L+ +M+  GI P   + + ++ G C+ G  S A E  ++ +       
Sbjct: 472 HCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRC 531

Query: 373 ---SEGVDP---DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              + G  P   + ++Y  LI+G  ++    KA  L S M   GL PD + Y V+L G  
Sbjct: 532 NVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLF 591

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           +   +    ++   M++ G+ P+ + +  L   +     LK A
Sbjct: 592 QVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSA 632



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 145/430 (33%), Positives = 231/430 (53%), Gaps = 5/430 (1%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           AF  ++ +      P V  Y  LI  LCK    +  +E L    ++G +      N LL 
Sbjct: 101 AFSELSRLKSSKFTPNV--YGELIIVLCKM---ELVEEALSMYHKVGAALTIQACNVLLY 155

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
              +         I+ EM   G++P +++F TLI    R G L RA   F EM+  G+VP
Sbjct: 156 VLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVP 215

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
             ++YTI+I G C +  + EA  M   M E G   +V TYNT+++G C+     +A  L+
Sbjct: 216 TVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLY 275

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +ML  G+ PD  TF  LI G CK G M  A NLF  M + S+ P+I  YN+LID +CKV
Sbjct: 276 QDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKV 335

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G++ +A  L+ ++   ++SP+  +Y ILI G CS+    EA  ++ +M  +GI    V+ 
Sbjct: 336 GDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTY 395

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N++I G C+ G   KA E  S+M   GV+P+ I+++TLI+G+ +  N+  A  + S+M  
Sbjct: 396 NSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVI 455

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           + L PDV+TY  ++ G C+ G M ++  +   M++ G+ P+  T + L++G      + +
Sbjct: 456 KSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISD 515

Query: 469 AFRFHDEMLQ 478
           A     E ++
Sbjct: 516 ALELFTEKIE 525



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 238/448 (53%), Gaps = 15/448 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+   +  A+    EM  KG+ P  + Y  LI   C +  +EEA  +  +M   G
Sbjct: 188 LIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVG 247

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TYN+L++G CK     +A  +  +ML  GL PD  T+  L+   C+   M  A 
Sbjct: 248 VYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAAR 307

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M +  V P+I  +++LI  + + G +  A+  F E++   + PD   Y+I+I G 
Sbjct: 308 NLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGL 367

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      EA  + ++M ++G + + VTYN++++G C+   + +A ++ ++M E GV P+ 
Sbjct: 368 CSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNV 427

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+TLI G+CK  N+  A+ ++  M  KS+ PD+VTY  +IDG CK G M++A KL++D
Sbjct: 428 ITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSD 487

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV----------GKGIKPTL---VS 347
           M+   I+PN  +   L++G C  G +++A  L+ E +            G KP+L   V+
Sbjct: 488 MLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVA 547

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              +I G C+ G  SKA +  S M   G+ PD + Y  ++ G  + + +     L + M 
Sbjct: 548 YTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADML 605

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSE 435
             G++P+   + ++   +   G +  ++
Sbjct: 606 KFGVIPNSAVHVILCECYQESGFLKSAQ 633



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 254/499 (50%), Gaps = 18/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK   ++ A   L    + G        N L+    + G  E  +++   M   G
Sbjct: 121 LIIVLCKMELVEEA---LSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNG 177

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V T+ +LI+G C++G   RA+E+ DEM   G+ P    Y  L+   C    + EAE
Sbjct: 178 LSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAE 237

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   GV P++ +++TL+  + +     +AL  +++M   GLVPD V + I+I+G 
Sbjct: 238 SMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGL 297

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A  +   M++     ++  YN++++  C+   ++EA  LF E+    V PD 
Sbjct: 298 CKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDV 357

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LI G C      +A N+F+ MT++ I  + VTYN+LIDG CK G+M+KA ++ + 
Sbjct: 358 FTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQ 417

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + PN I++  LI+GYC + ++  A  ++ EMV K + P +V+   +I G+C+ G 
Sbjct: 418 MTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGS 477

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS-KMENQ---------G 410
             +A +  S M+  G+ P+  + + L++G  ++  +  A  L + K+E Q         G
Sbjct: 478 MKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGG 537

Query: 411 LVPDV---ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             P +   + Y  ++ G C+ G+   +  +   M   GL PD   Y  ++ G      + 
Sbjct: 538 SKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI- 596

Query: 468 EAFRFHDEMLQRGFVPDDA 486
                H +ML+ G +P+ A
Sbjct: 597 -LMMLHADMLKFGVIPNSA 614


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 156/522 (29%), Positives = 265/522 (50%), Gaps = 41/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC    +D A      + ++ V PD +TY+TL+    ++  L+ A  L++ M   G
Sbjct: 164 VLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSG 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           ++P V  YN+L+ G  K G  ++   V D++++  G  P+ ATYN +L   C+     E 
Sbjct: 224 VQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEV 283

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E++  M    + PD++++  LI    R+G +D A   + E+   GLV D  +Y  ++ G
Sbjct: 284 GEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKG 343

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV--F 237
           +C+ G V EA K  D     G + ++ TYN ++ GL  + M+ EA +L+ ++LE+ V   
Sbjct: 344 FCQAGRVQEAWKFWDSAGFAG-LRNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACI 401

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  TF TLIHG C++G  NKA  +F+       + D+ +Y+++I+G C VG +  A K+
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  M      PN   Y  LI+G+C +   ++A R++ +M   G  PT+++ NT+I G C+
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +    +A     +MV  G  PD  +Y +LI G   ++ +D A ++  ++  +GL  DV+ 
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581

Query: 418 YNVILTGFCRQGRMH-----------------------------------DSELILWRMI 442
           +N+++ G C  G++                                    D    LW  I
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641

Query: 443 -EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            E GL PD  +Y T I G  S + + E  +  DE+L RG +P
Sbjct: 642 TEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 248/501 (49%), Gaps = 37/501 (7%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGKGLK 62
            L K  ++D A   L EM + GV PD V YN L+    + G  E+  ++ + +    G +
Sbjct: 202 GLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGAR 261

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P + TYN +++GLCK GR     EV + M+   L PD  TY  L+   CR  ++  A  +
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL---------------- 166
           + E+ + G+  D   +++L+  F + G++  A  ++     AGL                
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 167 -------------------VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
                              +PD V +  +I+G C+NGF  +A  + +E    G  +DV +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y++++NGLC    L +A  ++ +M + G  P+ + +  LI G C+    + A+ ++  M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
                P ++TYNTLIDG CK  + ++A+ +  +M+    +P+  +YG LI G  S   + 
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDSISYNTL 386
           +A  +W +++ KG+K  ++  N +I G C +G   +A    S M   +   P+ ++YNTL
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           ++G      +DKA  L + +   GL PD+I+YN  + G C   R+H+   +L  ++ +G+
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681

Query: 447 NPDRSTYTTLINGHVSQNNLK 467
            P   T+  L+   +    ++
Sbjct: 682 IPTVITWNILVRAVIKYGPIQ 702



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 207/396 (52%), Gaps = 38/396 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+   +D A     E+ + G+  D   YN+L+  +C+ G ++EA++  +S    G
Sbjct: 305 LIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           L+  + TYN +I GL   G  D A E+ D + + +   PDT T+ TL+   C+    ++A
Sbjct: 365 LR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKA 423

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             IF E    G   D+ S+S++I      G+L  A+  + +M   G  P++ +Y  +I+G
Sbjct: 424 FTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISG 483

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+     +A+++  +M + GC   V+TYNT+++GLC+A+   EA  +  EM+E G  PD
Sbjct: 484 FCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543

Query: 240 FYTFTTLI-----------------------------------HGHCKDGNMNKALNLF- 263
             T+ +LI                                   HG C  G +++AL++F 
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFS 603

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D+  +K+  P++VTYNTL+DG  + G ++KA  LW  +    + P+ ISY   I G CS 
Sbjct: 604 DMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSC 663

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             + E  +L  E++ +GI PT+++ N +++   + G
Sbjct: 664 DRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 181/329 (55%), Gaps = 4/329 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV--YPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           M+  L     +D A + L ++ +K V   PDTVT+ TLI+  C+ GF  +AF +      
Sbjct: 374 MIKGLFDSGMVDEA-IELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARV 432

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G +  VF+Y+S+INGLC  GR   A +V ++M + G  P++  YN L+   C+    S+
Sbjct: 433 SGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSD 492

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  I+ +M+  G +P +++++TLI    +  +   A    REM   G  PD   Y  +I 
Sbjct: 493 AVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIR 552

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER-GVF 237
           G   +  + +AL +  ++L KG  +DV+ +N +++GLC A  + EA  +F++M E+    
Sbjct: 553 GLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP 612

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+ TL+ G  + G ++KA  L+  +T+  ++PDI++YNT I G C    + +  +L
Sbjct: 613 PNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQL 672

Query: 298 WADMISRKISPNYISYGILINGYCSMGHV 326
             +++SR I P  I++ IL+      G +
Sbjct: 673 LDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 157/294 (53%), Gaps = 3/294 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC++   + A     E    G   D  +Y+++IN  C  G L +A ++   M   G
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP    YN+LI+G C+  R   A  +  +M   G SP   TYNTL+   C+ E   EA 
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  EM   G  PDI ++ +LI G+FS + ++D AL  ++++   GL  D +++ I+I+G
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFS-DKKIDDALSIWKQILYKGLKVDVMMHNILIHG 588

Query: 180 YCRNGFVLEALKMRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            C  G V EAL +  +M EK  C  ++VTYNT+++GL     + +A  L+  + E G+ P
Sbjct: 589 LCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEP 648

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
           D  ++ T I G C    +++ + L D +  + I P ++T+N L+    K G ++
Sbjct: 649 DIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 10/349 (2%)

Query: 140 TLIGIFSRNGQLDRALMYFREMKSA-GLVPDNVLYTIIINGYCRNGFVLEA----LKMRD 194
            ++  FSR    D AL  FR + S  G  P    +  +++ + R     +A      +  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
               +    ++ TYN +L  LC    L  A  LF+ +  R V PD  T++TL+ G  K  
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQD 207

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISY 313
            ++ AL+L D M +  ++PD+V YN L+ G  K GE EK  ++W  ++      PN  +Y
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
            ++++G C  G   E   +W  MV   ++P +++   +I G CRSGD   A    S+++ 
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+  D+  YN+L+ GF +   + +A+         GL  ++ TYN+++ G    G M D
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSG-MVD 385

Query: 434 SELILWRMIEKGLN--PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             + LW ++EK +   PD  T+ TLI+G        +AF   +E    G
Sbjct: 386 EAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSG 434



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 5/219 (2%)

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADM----ISRKISPNYISYGILINGYCSMGHVTE 328
           P I ++N L+D F +      A+  +A +      R+I+PN  +Y I++   C+ G +  
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+  +  + + P  ++ +T++ G  +      A + L +M   GV PD + YN L+ 
Sbjct: 177 AVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLG 236

Query: 389 GFVREENMDKAFALVSKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           G  +    +K   +  K+ ++ G  P++ TYNV+L G C+ GR  +   +  RM+   L 
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           PD  TY  LI+G     ++  A R + E+++ G V D A
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAA 335


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/444 (32%), Positives = 253/444 (56%), Gaps = 3/444 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK--PGVFTYNSLINGLCK 77
           EM Q G+ P  VTYNTL++++ +EG  ++   L+  M  +G    P   TYN +I GL +
Sbjct: 221 EMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLAR 280

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           KG  + A E+++EM ++     + TYN L+     +  + + +++  EM   G+ P +V+
Sbjct: 281 KGYLEEAAELVEEM-RLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVT 339

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ +I    ++GQ++ A   F EM++ GL+PD + Y  ++NGYC+ G   EAL +  ++ 
Sbjct: 340 YNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLR 399

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G    V+TYN +++G CR   L EA  L  EM+E+G  PD YT+T L+ G     ++ 
Sbjct: 400 RAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLA 459

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
                FD M  K ++PD   YNT I     +G++ K+ +L   ++   IS + ++Y ILI
Sbjct: 460 MTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILI 519

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G C  G++ +A  L  +M+  G++P  ++   +I  +C  G   +A +F + M+S+G+ 
Sbjct: 520 DGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLP 579

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P +++Y  +I+ + R  N+  A+    KM  +G+ P+ ITYNV++   CR GR   +   
Sbjct: 580 PSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRH 639

Query: 438 LWRMIEKGLNPDRSTYTTLINGHV 461
            + M+E+GL P++ TYT LI+G +
Sbjct: 640 FYEMLERGLVPNKYTYTLLIDGKL 663



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 147/426 (34%), Positives = 241/426 (56%), Gaps = 3/426 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++++  K+ + D   M L EME +G    P+ VTYN +I    R+G+LEEA +L+  M  
Sbjct: 237 LLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRL 296

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
              K   FTYN LI GL  +G   +  ++  EM   G+ P   TYN ++    +   +  
Sbjct: 297 SK-KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEA 355

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A+  F EM   G+ PD++++++L+  + + G    AL+ F +++ AGL P  + Y I+I+
Sbjct: 356 AQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILID 415

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYCR G + EA ++++EM+E+GC+ DV TY  ++ G      L    + F+EML +G+ P
Sbjct: 416 GYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRP 475

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D + + T I      G+++K+  L +++  + I  D VTYN LIDG CK G ++ A +L 
Sbjct: 476 DCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELM 535

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             MIS  + P+ I+Y  LI+ +C  G + EA + + +M+  G+ P+ V+   II  YCR 
Sbjct: 536 MQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRR 595

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+   A  +  KM+ EGV+P+ I+YN LI+   R      A+    +M  +GLVP+  TY
Sbjct: 596 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTY 655

Query: 419 NVILTG 424
            +++ G
Sbjct: 656 TLLIDG 661



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 244/471 (51%), Gaps = 23/471 (4%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E + +   PDT +        C   F E        M+  G+ P V   N ++  L    
Sbjct: 165 ECKARDATPDTCS------TLCLSAFRE--------MASHGVAPDVKDCNKVLRVLRDAA 210

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA--PDIVS 137
           R D    V  EMLQ+G+ P   TYNTLL    ++    + + +  EM  RG +  P+ V+
Sbjct: 211 RWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVT 270

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ +I   +R G L+ A     EM+ +     +  Y  +I G    GFV +   ++ EM 
Sbjct: 271 YNVVIAGLARKGYLEEAAELVEEMRLSKKA-SSFTYNPLITGLLARGFVKKVDDLQLEME 329

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
            +G +  VVTYN +++GL ++  +  A   F EM   G+ PD  T+ +L++G+CK GN  
Sbjct: 330 NEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQK 389

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +AL LF  + +  + P ++TYN LIDG+C++G++E+A +L  +M+ +   P+  +Y IL+
Sbjct: 390 EALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILM 449

Query: 318 NG---YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            G    CS+    E F    EM+ KG++P   + NT I      GD SK+ +    ++ E
Sbjct: 450 KGSHNVCSLAMTREFFD---EMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLE 506

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+  D+++YN LI+G  +  N+  A  L+ +M + GL PD ITY  ++   C +G + ++
Sbjct: 507 GISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREA 566

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                 MI  GL P   TYT +I+ +  + NL  A+ +  +ML+ G  P++
Sbjct: 567 RKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 617



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 243/467 (52%), Gaps = 3/467 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM   GV PD    N ++         ++   +   M   G++P + TYN+L++   K+G
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEG 245

Query: 80  RCDRAKEVLDEMLQMGLS--PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           R D+   +L EM   G S  P+  TYN ++    RK  + EA E+  EM     A     
Sbjct: 246 RKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTY 305

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
              + G+ +R G + +      EM++ G++P  V Y  +I+G  ++G +  A     EM 
Sbjct: 306 NPLITGLLAR-GFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR 364

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G + DV+TYN++LNG C+A    EA  LF ++   G+ P   T+  LI G+C+ G++ 
Sbjct: 365 AMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 424

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A  L + M ++   PD+ TY  L+ G   V  +    + + +M+S+ + P+  +Y   I
Sbjct: 425 EARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRI 484

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
               ++G ++++F+L   ++ +GI    V+ N +I G C++G+   A+E + +M+S G+ 
Sbjct: 485 CAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQ 544

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD I+Y  LI+       + +A    + M + GL P  +TY VI+  +CR+G ++ +   
Sbjct: 545 PDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGW 604

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +M+E+G+ P+  TY  LI+        + A+R   EML+RG VP+
Sbjct: 605 FRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPN 651


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 260/493 (52%), Gaps = 7/493 (1%)

Query: 1   MVNALCK-DHKIDSAKMFLCEMEQKG---VYPDTVTYNTLINAYCREGFLEEAFQLMNSM 56
           ++ ALC+    +  A   L +M ++      P+ V+Y  ++   C     +EA  L+ SM
Sbjct: 82  VLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSM 141

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
              G++  V TY +LI GLC     D A E+L EM   G+ P+   Y+ LL   CR    
Sbjct: 142 QASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRW 201

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +  ++F EMSR GV PD++ F+  I    + G++ +A+     M   GL P+ V Y ++
Sbjct: 202 QDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVL 261

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG- 235
           IN  C+ G V EAL +R+EM +KG   DVVTYNT++ GL     +  A  L  EM++   
Sbjct: 262 INCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDT 321

Query: 236 -VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            V PD  TF ++IHG CK G M +A+++ ++M ++    ++VTYN LI GF +V ++  A
Sbjct: 322 LVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMA 381

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L +++IS  + P+  +Y ILING+  +  V  A      M  +GI+  L     ++  
Sbjct: 382 MNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAA 441

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+ G   +A    ++M       D+++Y+T++ G  +  ++  A  L+  M ++GL PD
Sbjct: 442 LCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPD 500

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +TY++++  F + G + ++E +L +M   G  PD + + +LI G+ ++  + +      
Sbjct: 501 AVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIH 560

Query: 475 EMLQRGFVPDDAF 487
           EM  +    D  F
Sbjct: 561 EMRAKNVAIDPKF 573



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 185/396 (46%), Gaps = 53/396 (13%)

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGL------------VPDNVLYTIIINGYCRNGFV 186
           +  + +  R G+ D A +  R +++A +            V D V Y I++   CR G  
Sbjct: 33  APFLAVLLRRGRADAAALLNRRLRAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGD 92

Query: 187 L---------------------------------------EALKMRDEMLEKGCVMDVVT 207
           L                                       EA+ +   M   G   DVVT
Sbjct: 93  LRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVT 152

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T++ GLC A  L  A +L  EM   GV P+   ++ L+ G+C+ G       +F+ M+
Sbjct: 153 YGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMS 212

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  ++PD++ +   ID  CK G + KA K+   M+ R + PN ++Y +LIN  C  G V 
Sbjct: 213 RLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVR 272

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG--VDPDSISYNT 385
           EA  L  EM  KG+ P +V+ NT+I G     +   A   L +M+     V+PD +++N+
Sbjct: 273 EALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNS 332

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+G  +   M +A ++   M  +G + +++TYN ++ GF R  +++ +  ++  +I  G
Sbjct: 333 VIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSG 392

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L PD  TY+ LING      +  A  F   M QRG 
Sbjct: 393 LEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGI 428


>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 260/476 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K H+   A   L EME  G  P  VTYN+LI+AY R+G L+EA +L N M+ KG
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP VFTY +L++G  + G+ + A  + +EM   G  P+  T+N  +     +    +  
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMM 439

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF E++  G++PDIV+++TL+ +F +NG        F+EMK AG VP+   +  +I+ Y
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A+ +   ML+ G   D+ TYNT+L  L R  M  +++ +  EM +    P+ 
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+H +     +    +L + +    I+P  V   TL+    K   + +A + +++
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R  SP+  +   +++ Y     V +A  +   M  +G  P++ + N+++  + RS D
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSAD 679

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K++E L +++++G+ PD ISYNT+I  + R   M  A  + S+M + G+VPDVITYN 
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNT 739

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            +  +       ++  ++  MI+ G  P+++TY ++++G+   N   EA  F +++
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 244/500 (48%), Gaps = 35/500 (7%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ PD  TYNTLI    R    +EA Q+   M   G      TYN+L++   K  
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSH 328

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A +VL+EM   G SP   TYN+L+    R   + EA E+  +M+ +G  PD+ +++
Sbjct: 329 RPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  F R G+++ A+  F EM++AG  P+   +   I  Y   G  ++ +K+ DE+   
Sbjct: 389 TLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVC 448

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   D+VT+NT+L    +  M +E   +F EM   G  P+  TF TLI  + + G+  +A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + ++  M    + PD+ TYNT++    + G  E++ K+ A+M   +  PN ++Y  L++ 
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 320 YCSMGHV-----------------------------------TEAFRLWYEMVGKGIKPT 344
           Y +   +                                    EA R + E+  +G  P 
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + + N+++  Y R     KA+E L  M   G  P   +YN+L+    R  +  K+  ++ 
Sbjct: 629 ITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++  +G+ PD+I+YN ++  +CR  RM D+  I   M + G+ PD  TY T I  + + +
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADS 748

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
             +EA      M++ G  P+
Sbjct: 749 MFEEAIGVVRYMIKHGCRPN 768



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 252/520 (48%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K+ ++ SA      +++ G   D  +Y +LI+A+   G   EA  +   M  +G
Sbjct: 179 VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEG 238

Query: 61  LKPGVFTYNSLINGLCKKGR-CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            KP + TYN ++N   K G   ++   ++++M   G++PD  TYNTL+    R     EA
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++F EM   G + D V+++ L+ ++ ++ +   A+    EM+  G  P  V Y  +I+ 
Sbjct: 299 AQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISA 358

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y R+G + EA++++++M EKG   DV TY T+L+G  RA  +  A ++F EM   G  P+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPN 418

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF   I  +   G     + +FD +    + PDIVT+NTL+  F + G   + + ++ 
Sbjct: 419 ICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M      P   ++  LI+ Y   G   +A  ++  M+  G+ P L + NT++    R G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD---------------------K 398
              ++++ L++M      P+ ++Y +L++ +   + +                      K
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598

Query: 399 AFALV--------------SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
              LV              S+++ +G  PD+ T N +++ + R+  +  +  +L  M E+
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKER 658

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G  P  +TY +L+  H    +  ++     E+L +G  PD
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 159/325 (48%), Gaps = 37/325 (11%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM++ G  P+  T+NTLI+AY R G  E+A  +   M   G+ P + TYN+++  L + G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLL-------------------------------- 107
             +++++VL EM      P+  TY +LL                                
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598

Query: 108 --VESCRK-ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
             V  C K + + EAE  F E+  RG +PDI + ++++ I+ R   + +A      MK  
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKER 658

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  P    Y  ++  + R+    ++ ++  E+L KG   D+++YNT++   CR   + +A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +F+EM + G+ PD  T+ T I  +  D    +A+ +   M +   +P+  TYN+++DG
Sbjct: 719 SRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778

Query: 285 FCKVGEMEKANKLWADMISRKISPN 309
           +CK+   ++A     D+  R + P+
Sbjct: 779 YCKLNRKDEAKLFVEDL--RNLDPH 801



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 168/334 (50%), Gaps = 5/334 (1%)

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A  +F + K    + DN +  I+I+   + G V  A  + + + E G  +DV +Y ++++
Sbjct: 157 AFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLIS 216

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN-MNKALNLFDIMTQKSIK 272
               +    EA ++F +M E G  P   T+  +++   K G   NK  +L + M    I 
Sbjct: 217 AFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA 276

Query: 273 PDIVTYNTLIDGFCKVGEM-EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           PD  TYNTLI   CK G + ++A +++ +M +   S + ++Y  L++ Y       EA +
Sbjct: 277 PDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMK 335

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +  EM   G  P++V+ N++I  Y R G   +A E  ++M  +G  PD  +Y TL++GF 
Sbjct: 336 VLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           R   ++ A  +  +M N G  P++ T+N  +  +  +G+  D   I   +   GL+PD  
Sbjct: 396 RAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIV 455

Query: 452 TYTTLINGHVSQNNL-KEAFRFHDEMLQRGFVPD 484
           T+ TL+     QN +  E      EM + GFVP+
Sbjct: 456 TWNTLL-AVFGQNGMDSEVSGVFKEMKRAGFVPE 488


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 164/508 (32%), Positives = 269/508 (52%), Gaps = 42/508 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+  ++  A   L +M + G  P  VT+ +L++ +C    + +AF L+  M   G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN+LI+GLCK G  + A E+L+EM + GL  D  TYNTLL   C     S+A 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +R + PD+V+F+ LI +F + G LD A   ++EM  + + P+NV Y  IING 
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + +A K  D M  KGC  +VVTYNT+++G C+ +M+ E   LF  M   G   D 
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ TLIHG+C+ G +  AL++F  M  + + PDI+T+  L+ G C  GE+E A   + D
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   +     ++Y I+I+G C    V +A+ L+  +  +G+KP   +   +I G C++G 
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471

Query: 361 ASKADEFLSKMVSEGV------DPDSI----SYNTLINGFVR---EENMDKAFALVSKME 407
             +ADE + +M  EG+      + D +    S N  I+  +R   E +    F +     
Sbjct: 472 RREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWM----- 526

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS---TYTTLINGHVSQN 464
            Q L+P  I ++  + GF R+          + ++E+G NP+ S   +++   + H  + 
Sbjct: 527 -QRLIP--IAFSSSVKGFVRRH---------YLLLERGNNPETSLSRSFSGASHHHHYRE 574

Query: 465 NLK---------EAFRFHDEMLQRGFVP 483
            L+         +AF    EMLQ   +P
Sbjct: 575 RLRNELHCIKFDDAFSLFCEMLQSRPIP 602



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 135/384 (35%), Positives = 216/384 (56%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++  C+  ++  A   L +M + G  P  VT  +L+N +C+    +EA  L++SM G G
Sbjct: 645  LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P V  YN++INGLCK    + A EV   M + G+  D  TYNTL+         ++A 
Sbjct: 705  FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  +M +R + P+++ F+ LI  F + G L  A   ++EM    +VP+   Y  +ING+
Sbjct: 765  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C +G + +A  M D M+ KGC  DVVTYNT++ G C++K + +   LF EM  +G+  D 
Sbjct: 825  CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 884

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +T+ TLIHG+C+ G +N A  +F+ M    + PDIVTYN L+D  C  G++EKA  +  D
Sbjct: 885  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 944

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            +   ++  + I+Y I+I G C    + EA+ L+  +  KG+KP  ++  T+I G CR G 
Sbjct: 945  LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 1004

Query: 361  ASKADEFLSKMVSEGVDPDSISYN 384
              +AD+   +M  +G  P    Y+
Sbjct: 1005 QREADKLCRRMKEDGFMPSERIYD 1028



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 237/440 (53%)

Query: 46   LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
             ++AF L   M      P +  +  ++  + K  + D    +  +M  +G+S D  ++  
Sbjct: 585  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644

Query: 106  LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
            L+   CR   +S A  +  +M + G  P IV+  +L+  F +  +   A+     M   G
Sbjct: 645  LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704

Query: 166  LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             VP+ V+Y  +ING C+N  +  AL++   M +KG   D VTYNT+++GL  +   T+A 
Sbjct: 705  FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764

Query: 226  DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
             L  +M++R + P+   FT LI    K+GN+ +A NL+  M ++S+ P++ TYN+LI+GF
Sbjct: 765  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824

Query: 286  CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
            C  G +  A  ++  M+S+   P+ ++Y  LI G+C    V +  +L+ EM  +G+    
Sbjct: 825  CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 884

Query: 346  VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
             + NT+I GYC++G  + A +  ++MV  GV PD ++YN L++       ++KA  +V  
Sbjct: 885  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 944

Query: 406  MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
            ++   +  D+ITYN+I+ G CR  ++ ++  +   +  KG+ PD   Y T+I+G   +  
Sbjct: 945  LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 1004

Query: 466  LKEAFRFHDEMLQRGFVPDD 485
             +EA +    M + GF+P +
Sbjct: 1005 QREADKLCRRMKEDGFMPSE 1024



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 227/422 (53%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  + K +K D       +ME  G+  D  ++  LI+ +CR   L  A  L+  M   G
Sbjct: 610  VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 669

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             +P + T  SL+NG C+  R   A  ++D M   G  P+   YNT++   C+  +++ A 
Sbjct: 670  FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 729

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            E+F  M ++G+  D V+++TLI   S +G+   A    R+M    + P+ + +T +I+ +
Sbjct: 730  EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 789

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             + G +LEA  +  EM+ +  V +V TYN+++NG C    L +A  +F+ M+ +G FPD 
Sbjct: 790  VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 849

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T+ TLI G CK   +   + LF  MT + +  D  TYNTLI G+C+ G++  A K++  
Sbjct: 850  VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 909

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M+   +SP+ ++Y IL++  C+ G + +A  +  ++    +   +++ N II+G CR+  
Sbjct: 910  MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 969

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              +A      +  +GV PD+I+Y T+I+G  R+    +A  L  +M+  G +P    Y+ 
Sbjct: 970  LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 1029

Query: 421  IL 422
             L
Sbjct: 1030 TL 1031



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 229/454 (50%)

Query: 10   KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
            K D A    CEM Q    P  V +  ++    +    +    L + M   G+   ++++ 
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 70   SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
             LI+  C+  R   A  +L +M+++G  P   T  +LL   C+     EA  +   M   
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 130  GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
            G  P++V ++T+I    +N  L+ AL  F  M+  G+  D V Y  +I+G   +G   +A
Sbjct: 704  GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 190  LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             ++  +M+++    +V+ +  +++   +   L EA +L+ EM+ R V P+ +T+ +LI+G
Sbjct: 764  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 250  HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
             C  G +  A  +FD+M  K   PD+VTYNTLI GFCK   +E   KL+ +M  + +  +
Sbjct: 824  FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 310  YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
              +Y  LI+GYC  G +  A +++  MV  G+ P +V+ N ++   C +G   KA   + 
Sbjct: 884  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 370  KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
             +    +D D I+YN +I G  R + + +A+ L   +  +G+ PD I Y  +++G CR+G
Sbjct: 944  DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003

Query: 430  RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
               +++ +  RM E G  P    Y   +  H + 
Sbjct: 1004 LQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 1037



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 224/443 (50%), Gaps = 9/443 (2%)

Query: 42  REGFL-----EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL 96
           R GFL     E+AF L   M      P +  +  L+       R +       +M   G+
Sbjct: 43  RTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGI 102

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           S D  ++  L+   CR   +S A  +  +M + G  P IV+F +L+  F    ++  A  
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
               M  +G  P+ V+Y  +I+G C+NG +  AL++ +EM +KG   DVVTYNT+L GLC
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
            +   ++A  +  +M++R + PD  TFT LI    K GN+++A  L+  M Q S+ P+ V
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TYN++I+G C  G +  A K +  M S+   PN ++Y  LI+G+C    V E  +L+  M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
             +G    + + NT+I GYC+ G    A +    MVS  V PD I++  L++G      +
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           + A      M        ++ YN+++ G C+  ++  +  +  R+  +G+ PD  TYT +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462

Query: 457 INGHVSQNNLKEAFRFHDEMLQR 479
           I G       +EA    DE+++R
Sbjct: 463 ILGLCKNGPRREA----DELIRR 481



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 224/412 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A     + ++   F  +ME  G+  D  ++  LI+ +CR   L  A  ++  M   G
Sbjct: 77  LLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG 136

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T+ SL++G C   R   A  ++  M++ G  P+   YNTL+   C+   ++ A 
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM ++G+  D+V+++TL+     +G+   A    R+M    + PD V +T +I+ +
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA ++  EM++     + VTYN+I+NGLC    L +A   F+ M  +G FP+ 
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G CK   +++ + LF  M+ +    DI TYNTLI G+C+VG++  A  ++  
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+SR+++P+ I++ IL++G C  G +  A   + +M        +V+ N +I G C++  
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
             KA E   ++  EGV PD+ +Y  +I G  +     +A  L+ +M+ +G++
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 228/455 (50%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           + + A     EM      P  V +  L+ A       E        M   G+   ++++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI+  C+  R   A  VL +M+++G  P   T+ +LL   C    + +A  +   M + 
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  P++V ++TLI    +NG+L+ AL    EM+  GL  D V Y  ++ G C +G   +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            +M  +M+++    DVVT+  +++   +   L EA +L+ EM++  V P+  T+ ++I+G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C  G +  A   FD+M  K   P++VTYNTLI GFCK   +++  KL+  M     + +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y  LI+GYC +G +  A  ++  MV + + P +++   ++ G C +G+   A     
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M         ++YN +I+G  + + ++KA+ L  ++  +G+ PD  TY +++ G C+ G
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
              +++ ++ RM E+G+    +     +  H S N
Sbjct: 471 PRREADELIRRMKEEGIICQMNAEDDHLEEHSSSN 505



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 241/531 (45%), Gaps = 45/531 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K   +D A+    EM Q  V P+ VTYN++IN  C  G L +A +  + M+ KG
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+LI+G CK    D   ++   M   G + D  TYNTL+   C+   +  A 
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IFC M  R V PDI++   L+     NG+++ AL+ F +M+ +      V Y I+I+G 
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +A ++   +  +G   D  TY  ++ GLC+     EAD+L   M E G+    
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQM 491

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI------VTYNTLIDGFCKVG----- 289
                 +  H    N   +L+L +I  +    P        + +++ + GF +       
Sbjct: 492 NAEDDHLEEH-SSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLE 550

Query: 290 ---------------------------------EMEKANKLWADMISRKISPNYISYGIL 316
                                            + + A  L+ +M+  +  P+ + +  +
Sbjct: 551 RGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRV 610

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           +     M        L+++M   GI   L S   +I  +CR    S A   L KM+  G 
Sbjct: 611 LTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGF 670

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P  ++  +L+NGF +     +A +LV  M+  G VP+V+ YN ++ G C+   ++++  
Sbjct: 671 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 730

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           + + M +KG+  D  TY TLI+G  +     +A R   +M++R   P+  F
Sbjct: 731 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 204/414 (49%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L  G     R + A  +  EM+     P    +  LL  +              +M   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           ++ D+ SF+ LI  F R  +L  AL    +M   G  P  V +  +++G+C    + +A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +   M++ G   +VV YNT+++GLC+   L  A +L NEM ++G+  D  T+ TL+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C  G  + A  +   M ++SI PD+VT+  LID F K G +++A +L+ +MI   + PN 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  +ING C  G + +A + +  M  KG  P +V+ NT+I G+C+     +  +   +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  EG + D  +YNTLI+G+ +   +  A  +   M ++ + PD+IT+ ++L G C  G 
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  + +    M E         Y  +I+G    + +++A+     +   G  PD
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPD 455



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 134/250 (53%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++   K+  +  A+    EM ++ V P+  TYN+LIN +C  G L +A  + + M  KG
Sbjct: 785  LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P V TYN+LI G CK  R +   ++  EM   GL  D  TYNTL+   C+   ++ A+
Sbjct: 845  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++F  M   GV+PDIV+++ L+     NG++++AL+   +++ + +  D + Y III G 
Sbjct: 905  KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            CR   + EA  +   +  KG   D + Y T+++GLCR  +  EAD L   M E G  P  
Sbjct: 965  CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024

Query: 241  YTFTTLIHGH 250
              +   +  H
Sbjct: 1025 RIYDETLRDH 1034



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 118/228 (51%)

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  LF  M      P IV +  L+     +   E        M    IS +  S+ ILI+
Sbjct: 55  AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            +C    ++ A  +  +M+  G +P++V+  +++ G+C       A   +  MV  G +P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           + + YNTLI+G  +   ++ A  L+++ME +GL  DV+TYN +LTG C  GR  D+  +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             M+++ +NPD  T+T LI+  V Q NL EA   + EM+Q    P++ 
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 260/496 (52%), Gaps = 32/496 (6%)

Query: 16  MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL 75
           M LC     G+ P+T T+N LI A C    ++ A +L + M  KG KP  FT+  L+ G 
Sbjct: 138 MVLC-----GISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY 192

Query: 76  CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           CK G  D+  E+L+ M   G+ P+   YNT++   CR+    ++E++  +M   G+ PDI
Sbjct: 193 CKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDI 252

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMK---SAGLV-PDNVLYTIIINGYCRNGFVLEALK 191
           V+F++ I    + G++  A   F +M+     GL  P+++ Y +++ G+C+ G + +A  
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + + + E   ++ + +YN  L GL R     EA+ +  +M+++G+ P  Y++  L+ G C
Sbjct: 313 LFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLC 372

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K G ++ A  +  +M +  + PD VTY  L+ G+C VG+++ A  L  +M+     PN  
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +  IL++   +MG ++EA  L  +M  KG     V+CN I+ G C SG+  KA E +  M
Sbjct: 433 TCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492

Query: 372 VSEG--------------VD---------PDSISYNTLINGFVREENMDKAFALVSKMEN 408
              G              VD         PD I+Y+TL+NG  +     +A  L ++M  
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMG 552

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           + L PD + YN+ +  FC+QG++  +  +L  M +KG +    TY +LI G   +N + E
Sbjct: 553 EKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612

Query: 469 AFRFHDEMLQRGFVPD 484
                DEM ++G  P+
Sbjct: 613 IHGLMDEMREKGISPN 628



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 263/511 (51%), Gaps = 27/511 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC    +D+A+    EM +KG  P+  T+  L+  YC+ G  ++  +L+NSM   G
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFG 212

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    YN++++  C++GR D +++++++M + GL PD  T+N+ +   C++  + +A 
Sbjct: 213 VLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272

Query: 121 EIFCEMSRR---GVA-PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            IF +M      G+  P+ ++++ ++  F + G L+ A   F  ++    +     Y I 
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIW 332

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           + G  R+G  +EA  +  +M++KG    + +YN +++GLC+  ML++A  +   M   GV
Sbjct: 333 LQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD  T+  L+HG+C  G ++ A +L   M + +  P+  T N L+     +G + +A +
Sbjct: 393 SPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEE 452

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK-------------- 342
           L   M  +    + ++  I+++G C  G + +A  +   M   G                
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512

Query: 343 ---------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
                    P L++ +T++ G C++G  ++A    ++M+ E + PDS++YN  I+ F ++
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQ 572

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             +  AF ++  ME +G    + TYN ++ G   + ++ +   ++  M EKG++P+  TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTY 632

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            T I        +++A    DEM+Q+   P+
Sbjct: 633 NTAIQYLCEGGKVEDATNLLDEMMQKNIAPN 663



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 246/514 (47%), Gaps = 72/514 (14%)

Query: 35  TLINAYCREGFLEEAF---QLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           ++++ + +   +++AF   Q + S   +  KPG++ YN L+    ++ R +    +  +M
Sbjct: 80  SVVSIFAKSNHIDKAFPQFQFVRSRFPEN-KPGIYLYNVLLESCIRERRVEFVSWLYKDM 138

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           +  G+SP+T T+N L+   C    +  A E+F EM  +G  P+  +F  L+  + + G  
Sbjct: 139 VLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D+ L     M+S G++P+ V+Y  I++ +CR G   ++ K+ ++M E+G V D+VT+N+ 
Sbjct: 199 DKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSR 258

Query: 212 LNGLCRAKMLTEADDLFNEM-------LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           ++ LC+   + +A  +F++M       L R   P+  T+  ++ G CK G +  A  LF+
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLPR---PNSITYNLMLKGFCKVGLLEDAKTLFE 315

Query: 265 I-----------------------------------MTQKSIKPDIVTYNTLIDGFCKVG 289
                                               M  K I P I +YN L+DG CK+G
Sbjct: 316 SIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLG 375

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +  A  +   M    +SP+ ++YG L++GYCS+G V  A  L  EM+     P   +CN
Sbjct: 376 MLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            ++      G  S+A+E L KM  +G   D+++ N +++G      +DKA  +V  M   
Sbjct: 436 ILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVH 495

Query: 410 G-----------------------LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           G                        +PD+ITY+ +L G C+ GR  +++ +   M+ + L
Sbjct: 496 GSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKL 555

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            PD   Y   I+    Q  +  AFR   +M ++G
Sbjct: 556 QPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 254/544 (46%), Gaps = 65/544 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   CK    D     L  ME  GV P+ V YNT+++++CREG  +++ +L+  M  +G
Sbjct: 188 LVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEG 247

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEV-----LDEMLQMGLSPDTATYNTLLVESCR--- 112
           L P + T+NS I+ LCK+G+   A  +     LDE L +   P++ TYN +L   C+   
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP-RPNSITYNLMLKGFCKVGL 306

Query: 113 -----------KEN---------------------MSEAEEIFCEMSRRGVAPDIVSFST 140
                      +EN                       EAE +  +M  +G+ P I S++ 
Sbjct: 307 LEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNI 366

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+    + G L  A      MK  G+ PD V Y  +++GYC  G V  A  +  EM+   
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C+ +  T N +L+ L     ++EA++L  +M E+G   D  T   ++ G C  G ++KA+
Sbjct: 427 CLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486

Query: 261 NLF-----------------------DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            +                        D + + +  PD++TY+TL++G CK G   +A  L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTL 546

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +A+M+  K+ P+ ++Y I I+ +C  G ++ AFR+  +M  KG   +L + N++I G   
Sbjct: 547 FAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
                +    + +M  +G+ P+  +YNT I        ++ A  L+ +M  + + P+V +
Sbjct: 607 KNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFS 666

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           +  ++  FC+      ++ +    +          Y+ + N  ++   L +A    + +L
Sbjct: 667 FKYLIGAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVL 725

Query: 478 QRGF 481
            RGF
Sbjct: 726 DRGF 729



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 206/438 (47%), Gaps = 24/438 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +  AK  +  M++ GV PD VTY  L++ YC  G ++ A  L+  M    
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +T N L++ L   GR   A+E+L +M + G   DT T N ++   C    + +A 
Sbjct: 427 CLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486

Query: 121 EIFCEMSRRGVA-----------------------PDIVSFSTLIGIFSRNGQLDRALMY 157
           EI   M   G A                       PD++++STL+    + G+   A   
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTL 546

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
           F EM    L PD++ Y I I+ +C+ G +  A ++  +M +KGC   + TYN+++ GL  
Sbjct: 547 FAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              + E   L +EM E+G+ P+  T+ T I   C+ G +  A NL D M QK+I P++ +
Sbjct: 607 KNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFS 666

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           +  LI  FCKV + + A +++   +S       + Y ++ N   + G + +A  L   ++
Sbjct: 667 FKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL-YSLMFNELLAAGQLLKATELLEAVL 725

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            +G +        ++   C+  +   A   L KM+ +G   D  +   +I+G  +  N  
Sbjct: 726 DRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKK 785

Query: 398 KAFALVSKMENQGLVPDV 415
           +A     KM     V +V
Sbjct: 786 EANNFAEKMMEMASVGEV 803



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 202/395 (51%), Gaps = 16/395 (4%)

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
           T T   +LV +   E + E   +    S +     + S  +++ IF+++  +D+A   F+
Sbjct: 42  TPTMACILVRAKMHEEIEELHNLILSSSIQKTK--LSSLLSVVSIFAKSNHIDKAFPQFQ 99

Query: 160 EMKSAGLVPDN----VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            ++S    P+N     LY +++    R   V     +  +M+  G   +  T+N ++  L
Sbjct: 100 FVRSR--FPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRAL 157

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
           C +  +  A +LF+EM E+G  P+ +TF  L+ G+CK G  +K L L + M    + P+ 
Sbjct: 158 CDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNK 217

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           V YNT++  FC+ G  + + KL   M    + P+ +++   I+  C  G V +A R++ +
Sbjct: 218 VVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSD 277

Query: 336 M-----VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI-SYNTLING 389
           M     +G   +P  ++ N ++KG+C+ G    A + L + + E  D  S+ SYN  + G
Sbjct: 278 MELDEYLGLP-RPNSITYNLMLKGFCKVGLLEDA-KTLFESIRENDDLVSLQSYNIWLQG 335

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
            VR     +A  ++ +M ++G+ P + +YN+++ G C+ G + D++ I+  M   G++PD
Sbjct: 336 LVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPD 395

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             TY  L++G+ S   +  A     EM++   +P+
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 150/480 (31%), Positives = 258/480 (53%), Gaps = 2/480 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR-EGF-LEEAFQLMNSMSGKGLKPG 64
           KD K+D A      M +    P    +N L++A  + + F L  +  L+  M   G +P 
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           + T +SL+NG C   R   A  ++D+M++MG  PDT T+ TL+         SEA  +  
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            M +RG  P++V++  ++    + G +D A     +M++A +  D V++  II+  C+  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V +AL +  EM  KG   +VVTY+++++ LC     ++A  L ++M+E+ + P+  TF 
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI    K+G   +A  L D M ++SI PDI TYN+LI+GFC    ++KA +++  M+S+
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+  +Y  LI G+C    V +   L+ EM  +G+    V+  T+I+G    GD   A
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 378

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            +   +MVS+GV PD ++Y+ L++G      ++KA  +   M+   +  D+  Y  ++ G
Sbjct: 379 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 438

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C+ G++ D   +   +  KG+ P+  TY T+I+G  S+  L+EA+    +M + G +PD
Sbjct: 439 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 498



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 238/438 (54%), Gaps = 1/438 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I  A   + +M + G  PDT+T+ TLI+         EA  L++ M  +G
Sbjct: 85  LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 144

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TY  ++NGLCK+G  D A  +L++M    +  D   +NT++   C+  ++ +A 
Sbjct: 145 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+ P++V++S+LI      G+   A     +M    + P+ V +  +I+ +
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G  +EA K+ D+M+++    D+ TYN+++NG C    L +A  +F  M+ +  FPD 
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 324

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G CK   +     LF  M+ + +  D VTY TLI G    G+ + A K++  
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++Y IL++G C+ G + +A  ++  M    IK  +    T+I+G C++G 
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 444

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                +    +  +GV P+ ++YNT+I+G   +  + +A+AL+ KM+  G +PD  TYN 
Sbjct: 445 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 504

Query: 421 ILTGFCRQG-RMHDSELI 437
           ++    R G +   +ELI
Sbjct: 505 LIRAHLRDGDKAASAELI 522



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 256/486 (52%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKID--SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           +++A+ K  K D   +   L +M + G  P  VT ++L+N YC    + +A  L++ M  
Sbjct: 48  LLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 107

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G +P   T+ +LI+GL    +   A  ++D M+Q G  P+  TY  ++   C++ ++  
Sbjct: 108 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 167

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  +M    +  D+V F+T+I    +   +D AL  F+EM++ G+ P+ V Y+ +I+
Sbjct: 168 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 227

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
             C  G   +A ++  +M+EK    ++VT+N +++   +     EA+ L ++M++R + P
Sbjct: 228 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 287

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D +T+ +LI+G C    ++KA  +F+ M  K   PD+ TYNTLI GFCK   +E   +L+
Sbjct: 288 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 347

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R +  + ++Y  LI G    G    A +++ +MV  G+ P +++ + ++ G C +
Sbjct: 348 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 407

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA E    M    +  D   Y T+I G  +   +D  + L   +  +G+ P+V+TY
Sbjct: 408 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 467

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N +++G C +  + ++  +L +M E G  PD  TY TLI  H+   +   +     EM  
Sbjct: 468 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527

Query: 479 RGFVPD 484
             FV D
Sbjct: 528 CRFVGD 533



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 4/232 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +++       EM  +G+  DTVTY TLI     +G  + A ++   M   G
Sbjct: 330 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 389

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY+ L++GLC  G+ ++A EV D M +  +  D   Y T++   C+   + +  
Sbjct: 390 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 449

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++FC +S +GV P++V+++T+I        L  A    ++MK  G +PD+  Y  +I  +
Sbjct: 450 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 509

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
            R+G    + ++  EM     V D  T   + N L   ++    D  F +ML
Sbjct: 510 LRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL----DKSFLDML 557


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 249/447 (55%), Gaps = 8/447 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M++ G  P++VT+N L+N + ++G   +  +L+ +M+ +G++P V +YN L+ GLCK  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 81  CDRAKEVLDEMLQMG--LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
              A+E++ +M+  G   +PD  TY+TLL   C+   + E+ E+  E+  RG+ PD + +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + ++    ++ +L  AL    EM  AG  P  + +  +I+G CR   +  A  +   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G   DVVTYNT+++GLC+A  L EA+ L   M   G  PD   +++ ++G CK G +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISYGILI 317
           A  + + M      P++VTYNT++DG CK G+++ A ++   M S      N + Y  ++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G C +G   EA  +   M   G +P +V+ ++++ G C++G   +A E + +M  EG  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLV-----PDVITYNVILTGFCRQGRMH 432
           P++++Y +L++G      + +A  +V +M + G       P V TYN ++ G C+ GR+ 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 433 DSELILWRMIEKGLNPDRSTYTTLING 459
           D+     RM  +G +PD  +Y+T++ G
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEG 447



 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 231/437 (52%), Gaps = 8/437 (1%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M   G  P   T+N+L+NG  K+GR    + +L+ M   G+ P+  +YN LL   C+ E 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 116 MSEAEEIFCEMSRRG--VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
             EAEE+  +M  RG    PD+V++STL+  + + G+++ +    +E+ S GL PD ++Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           T ++   C++  + EAL++ +EM+  GC   ++T+NT+++G CR K L  AD L   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            GV  D  T+ TL+ G CK G + +A  L + M      PD+V Y++ + G CK G++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSCNTII 352
           A+++   M      PN ++Y  +++G C  G +  A  +  +M    G    +V  +T++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G C+ G   +A   +  M   G  PD ++Y++L+NG  +   +++A   V +M  +G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN-----PDRSTYTTLINGHVSQNNLK 467
           P+ +TY  ++ G C  GR+ ++E ++  M   G       P  STY  LI G      + 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 468 EAFRFHDEMLQRGFVPD 484
           +A +F   M  +G  PD
Sbjct: 421 DALKFFQRMRSQGCDPD 437



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 133/400 (33%), Positives = 231/400 (57%), Gaps = 8/400 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++  LCK  +   A+  + +M  +G    PD VTY+TL++ YC+ G +EE+ +L+  +  
Sbjct: 51  LLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVIS 110

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +GL+P    Y  ++  LCK  R   A E+L+EM++ G  P   T+NTL+   CR++N+  
Sbjct: 111 RGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEM 170

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A+ +   M+  GV  D+V+++TL+    + G+L  A      MK++G  PD V Y+  + 
Sbjct: 171 ADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER-GVF 237
           G C++G VL A ++ ++M +     +VVTYNTIL+GLC++  +  A ++  +M    G  
Sbjct: 231 GLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG 290

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            +   ++T++ G CK G   +A ++ + M +   +PD+VTY++L++G CK G++E+A + 
Sbjct: 291 LNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG-----IKPTLVSCNTII 352
             +M      PN ++Y  L++G CS G + EA R+  EM   G       P++ + N +I
Sbjct: 351 VREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALI 410

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
            G C++G    A +F  +M S+G DPD +SY+T++ G  R
Sbjct: 411 GGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 183/332 (55%), Gaps = 6/332 (1%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LCK  ++  A   L EM + G  P  +T+NTLI+  CRE  LE A  L+ +M+  G+K 
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKA 185

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V TYN+L++GLCK GR   A+++L+ M   G +PD   Y++ +   C+   +  A ++ 
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL 245

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL-YTIIINGYCR 182
            +M      P++V+++T++    ++G++D AL    +M S+     NV+ Y+ +++G C+
Sbjct: 246 EQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G   EA  + + M   GC  DVVTY++++NGLC+A  + EA +   EM   G  P+  T
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVT 365

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKS-----IKPDIVTYNTLIDGFCKVGEMEKANKL 297
           + +L+HG C  G + +A  + + M+          P + TYN LI G CK G ++ A K 
Sbjct: 366 YCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKF 425

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEA 329
           +  M S+   P+ +SY  ++ G    G   +A
Sbjct: 426 FQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 112/195 (57%), Gaps = 6/195 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++ LCK  KID+A   + +M    G   + V Y+T+++  C+ G  +EA  +M +M+  
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARA 322

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G +P V TY+SL+NGLCK G+ + A E + EM   G  P+  TY +L+   C    ++EA
Sbjct: 323 GCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA 382

Query: 120 EEIFCEMSRRG-----VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           E +  EMS  G       P + +++ LIG   + G++D AL +F+ M+S G  PD V Y+
Sbjct: 383 ERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYS 442

Query: 175 IIINGYCRNGFVLEA 189
            I+ G  R+G  L+A
Sbjct: 443 TIVEGLARSGRALQA 457


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 153/490 (31%), Positives = 253/490 (51%), Gaps = 8/490 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEME---QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           ++ ALC+    D A   L  M         P+ V+Y  L+ A C +   ++A  L+ SM 
Sbjct: 83  VLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMR 142

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             G++  V TY +LI GLC     D+A E++ EM + G+ P+   Y++LL   C+     
Sbjct: 143 SAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWE 202

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +  ++F EMS +G+ PD+V ++ LI    + G+  +A      M   GL P+ V Y ++I
Sbjct: 203 DVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLI 262

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-- 235
           N  C+ G V EA+ +  +M EKG   DVVTYNT++ GL     + EA  L  EM+ RG  
Sbjct: 263 NCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKN 321

Query: 236 -VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            V P+  TF ++I G C  G M +A  +  +M +     ++VTYN LI G  +V ++ KA
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKA 381

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L  +M S  + P+  +Y ILI G+C M  V  A  L   M  +GI+P L     ++  
Sbjct: 382 MELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVA 441

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C  G   +A    ++M       D ++Y+T+I+G  +  ++  A  L+  + ++GL PD
Sbjct: 442 MCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPD 500

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            +TY++++  F + G M  +  +L +M   G  PD + + +LI G+ ++  + +      
Sbjct: 501 AVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIR 560

Query: 475 EMLQRGFVPD 484
           EM+ +    D
Sbjct: 561 EMITKNIALD 570



 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 249/464 (53%), Gaps = 6/464 (1%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMS---GKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           D V+YNT++ A CR G  + A  L+ +MS       +P   +Y  L+  LC     D+A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L  M   G+  D  TY TL+   C    + +A E+  EM   G+ P++V +S+L+  +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            ++G+ +     F EM   G+ PD V+YT +I+  C+ G   +A  + D M+ +G   +V
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYN ++N +C+   + EA  +  +M E+GV PD  T+ TLI G      M++A+ L + 
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 266 MTQKS--IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           M +    +KP++VT+N++I G C +G M +A ++ A M       N ++Y +LI G   +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             V +A  L  EM   G++P   + + +IKG+C+     +A++ LS M   G++P+   Y
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
             L+     +  M++A  L ++M+N     DV+ Y+ ++ G C+ G +  ++ +L  +++
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           +GL PD  TY+ +IN      +++ A     +M   GF+PD A 
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAV 538



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 150/285 (52%), Gaps = 7/285 (2%)

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEM-LE--RGVFPDFYTFTTLIHGHCKDGNMNK 258
           V D V+YNT+L  LCR      A  L   M LE      P+  ++T L+   C D   ++
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+ L   M    ++ D+VTY TLI G C   E++KA +L  +M    I PN + Y  L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           GYC  G   +  +++ EM  KGI+P +V    +I   C+ G A KA   +  MV  G++P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           + ++YN LIN   +E ++ +A  ++ KM  +G+ PDV+TYN ++ G      M ++  +L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 439 WRMIEKGLN---PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             M+ +G N   P+  T+ ++I G      +++AF+    M + G
Sbjct: 314 EEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 158/511 (30%), Positives = 267/511 (52%), Gaps = 27/511 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +  ++++++       +M    V P+  T+N LI   C  G LE+A +L + M  +G
Sbjct: 118 LLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARG 177

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P  FT+  L+ G C+ G   +  E+L +M  MG+ P+   YNTL+   C++    +AE
Sbjct: 178 CEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAE 237

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK---SAGLVPDNVL-YTII 176
           ++  +M   G+ P + +F++ I     +G++  A   FR+M+     GL   NV+ Y ++
Sbjct: 238 KLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLM 297

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           + G+C+ G + EA  + D M      +++ +YN  L GL R   L EA  +  EML  G+
Sbjct: 298 LMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGI 357

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD Y++  ++ G CK+G ++ A  L  +M +  I PD VTY+TL+ G+C  G++ +AN 
Sbjct: 358 EPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANN 417

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L  +MIS   SPN  +  +L++     G ++EA  L  +M  KG     V+CN II   C
Sbjct: 418 LLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALC 477

Query: 357 RSGDASKADEFLSKMVSEG--------------VD---------PDSISYNTLINGFVRE 393
            +G   KA E ++ M + G              VD         PD ++Y+T+I+G  + 
Sbjct: 478 NNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKA 537

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             +D A     +M ++GL PD   Y+  +  FCR+G++  +  +L  M ++G N    TY
Sbjct: 538 GRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTY 597

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +LI G  S+N + E +   DEM ++G  PD
Sbjct: 598 NSLILGLGSKNQIFELYGLIDEMREKGVSPD 628



 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 258/484 (53%), Gaps = 27/484 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+          L +M   G+ P+ V YNTLI+++C+EG   +A +L++ M   G
Sbjct: 188 LVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDG 247

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML---QMGLS-PDTATYNTLLVESCRKENM 116
           L P V T+NS I+ LC  G+   A  +  +M    ++GL  P+  TY  +L+  C++  +
Sbjct: 248 LVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGML 307

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            EA+ +   M R     ++ S++  +    RNG+L  A +  +EM   G+ PD   Y I+
Sbjct: 308 EEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIV 367

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++G C+NG + +A  +   M+  G + D VTY+T+L+G C    + EA++L +EM+    
Sbjct: 368 MDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNC 427

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA-- 294
            P+ YT   L+H   K+G +++A NL   M +K    D VT N +I+  C  G+++KA  
Sbjct: 428 SPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIE 487

Query: 295 --NKLWA------------------DMIS-RKISPNYISYGILINGYCSMGHVTEAFRLW 333
             N +W                   D IS +K +P+ ++Y  +I+G C  G + +A + +
Sbjct: 488 IVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKF 547

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            EM+ KG++P     +T I  +CR G  S A + L  M   G +    +YN+LI G   +
Sbjct: 548 IEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSK 607

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             + + + L+ +M  +G+ PDV TYN +L   C  GR++D+  +L  M++KG++P+ S++
Sbjct: 608 NQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSF 667

Query: 454 TTLI 457
             LI
Sbjct: 668 RILI 671



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 243/509 (47%), Gaps = 64/509 (12%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGK--GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           L+    + GF  +A     S+       +P ++ YN L+    ++ R +    +  +M+ 
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
             +SP+  T+N L+   C   ++ +A E+F +M  RG  P+  +F  L+  + R G   +
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASK 200

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
            L    +M++ G++P+NVLY  +I+ +C+ G   +A K+ D+M E G V  V T+N+ ++
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRIS 260

Query: 214 GLCRAKMLTEADDLFNEML---ERGV-FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            LC +  + EA  +F +M    E G+  P+  T+  ++ G CK+G + +A  L D M + 
Sbjct: 261 ALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRN 320

Query: 270 S-----------------------------------IKPDIVTYNTLIDGFCKVGEMEKA 294
           +                                   I+PDI +YN ++DG CK G +  A
Sbjct: 321 ANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDA 380

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L   MI   I P+ ++Y  L++GYCS G V EA  L +EM+     P   +CN ++  
Sbjct: 381 RMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHS 440

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG---- 410
             + G  S+A+  L KM  +G   D+++ N +IN       +DKA  +V+ M   G    
Sbjct: 441 LWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAAL 500

Query: 411 -------------------LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
                                PD++TY+ I++G C+ GR+ D++     M+ KGL PD +
Sbjct: 501 GNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSA 560

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            Y T I+    +  +  AF+   +M +RG
Sbjct: 561 IYDTFIHSFCREGKISSAFQVLKDMEKRG 589



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 250/511 (48%), Gaps = 34/511 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           ++++ CK+ K   A+  + +M + G+ P   T+N+ I+A C  G + EA ++   M    
Sbjct: 223 LISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDE 282

Query: 60  --GL-KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
             GL  P V TY  ++ G CK+G  + AK ++D M +     +  +YN  L+   R   +
Sbjct: 283 ELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKL 342

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            EA  +  EM   G+ PDI S++ ++    +NG L  A M    M   G++PD V Y+ +
Sbjct: 343 LEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTL 402

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++GYC  G V EA  +  EM+   C  +  T N +L+ L +   ++EA++L  +M E+G 
Sbjct: 403 LHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGY 462

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLF-----------------------DIMTQKSIKP 273
             D  T   +I+  C +G ++KA+ +                        D ++ K   P
Sbjct: 463 GVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTP 522

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D+VTY+T+I G CK G ++ A K + +M+S+ + P+   Y   I+ +C  G ++ AF++ 
Sbjct: 523 DLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVL 582

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            +M  +G   TL + N++I G        +    + +M  +GV PD  +YN ++N     
Sbjct: 583 KDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEG 642

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN---PDR 450
             ++ A +++ +M  +G+ P++ ++ +++  FC+      S      + E  LN      
Sbjct: 643 GRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASH----EVFEIALNVCGHKE 698

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + YT + N  +    + EA    +  L R F
Sbjct: 699 ALYTLMFNELLVGGKVAEAKELFETALDRSF 729



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/528 (25%), Positives = 249/528 (47%), Gaps = 60/528 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   CK+  ++ AK  +  M++   + +  +YN  +    R G L EA+ ++  M G G
Sbjct: 297 MLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIG 356

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +++YN +++GLCK G    A+ ++  M++ G+ PDT TY+TLL   C K  + EA 
Sbjct: 357 IEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEAN 416

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM     +P+  + + L+    + G++  A    ++M   G   D V   IIIN  
Sbjct: 417 NLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINAL 476

Query: 181 CRNGFVLEALKMRDEMLEKG-----------------------CVMDVVTYNTILNGLCR 217
           C NG + +A+++ + M   G                       C  D+VTY+TI++GLC+
Sbjct: 477 CNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCK 536

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
           A  L +A   F EM+ +G+ PD   + T IH  C++G ++ A  +   M ++     + T
Sbjct: 537 AGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQT 596

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           YN+LI G     ++ +   L  +M  + +SP+  +Y  ++N  C  G + +A  +  EM+
Sbjct: 597 YNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEML 656

Query: 338 GKGIKPTLVSCNTIIKGYCRS----------------------------------GDASK 363
            KGI P + S   +IK +C++                                  G  ++
Sbjct: 657 QKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAE 716

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E     +    D  +  Y  LI+   ++E ++ A  ++ ++ ++G   D  ++  ++ 
Sbjct: 717 AKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVID 776

Query: 424 GFCRQGRMHDSELILWRMIEKG--LNPDRSTYTTLINGHVSQNNLKEA 469
           GF + G  H ++ +  RM+E     N +   Y   + GH+ +N  K+A
Sbjct: 777 GFGKMGNKHVADELAERMMEMASESNKENKAYPN-VKGHILRNKNKDA 823



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 136/269 (50%), Gaps = 7/269 (2%)

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFT-TLIHGHCKDGNMNKALNLFDIMTQK--SI 271
           L R+KM  E DDL   +L         +    L+    K G  NKA++ F  +       
Sbjct: 49  LIRSKMFNELDDLHQLLLNSPSLESSDSSLENLVTVLAKSGFFNKAISHFKSLRSNFPEK 108

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           +P I  YN L+    +   +E  + L+ DM+  ++SP   ++ +LI   C  GH+ +A  
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L+ +M  +G +P   +   +++GYCR+G ASK  E L +M + G+ P+++ YNTLI+ F 
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI---EKGL-N 447
           +E     A  LV KM   GLVP V T+N  ++  C  G++ ++  I   M    E GL +
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           P+  TY  ++ G   +  L+EA    D M
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTM 317


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 257/487 (52%), Gaps = 40/487 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +   + +      +M++ G  PD  T   +  AYC+   +  A + +  M+  G
Sbjct: 214 ILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMG 273

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  +  Y++++NG C+ G+ + A+ +LD +   G SP+  TY  L+   C ++NM EAE
Sbjct: 274 VEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAE 333

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E+                                   K+  LV D  ++  +INGY
Sbjct: 334 GVVQEIR----------------------------------KNKQLVVDEAVFGAVINGY 359

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A ++ +EM++    +++  YN ++NG C+   + EA ++ +EM   GV PD 
Sbjct: 360 CQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDT 419

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y++ +L+ G+CK G MNKA   ++ M +       +TYN L+ GFC +G ++ A +LW  
Sbjct: 420 YSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFL 479

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + I+PN IS   L++G+   G   +A  LW E + +G+     + NT+I G C+   
Sbjct: 480 MLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIER 539

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A+E + KM      PD I+Y TL +G+ +  +MD+A  +++++EN G  P +  +N 
Sbjct: 540 MPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNS 599

Query: 421 ILTGFC---RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           ++TG     + G+++D   IL+ M  +GL+P+   Y  LI G   + +L  A+  + EM+
Sbjct: 600 LITGHFIAKQHGKVND---ILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMI 656

Query: 478 QRGFVPD 484
           ++G VP+
Sbjct: 657 EKGLVPN 663



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 274/545 (50%), Gaps = 62/545 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQ-KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V   C +  ++ A+  + E+ + K +  D   +  +IN YC+ G +E+A +L+N M   
Sbjct: 319 LVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDS 378

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            L+  +F YN +ING CK GR   A  +L EM  +G+ PDT +YN+L+   C+K  M++A
Sbjct: 379 RLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKA 438

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E +  M R G A   ++++ L+  F   G +D AL  +  M   G+ P+ +  + +++G
Sbjct: 439 FETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDG 498

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + ++G   +AL +  E L +G   +  T+NT++NGLC+ + + EA++L ++M +    PD
Sbjct: 499 FFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPD 558

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TL  G+CK G+M++A  + + +      P I  +N+LI G     +  K N +  
Sbjct: 559 IITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILF 618

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M +R +SPN ++YG LI G+C  G +  A+ L+ EM+ KG+ P L  C++++  + R G
Sbjct: 619 EMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKG 678

Query: 360 DASKADEFLSKMVSEGVDPD--------------------------SISYNTLINGFVRE 393
              +A+  L  +V   + PD                           I +N +I G  + 
Sbjct: 679 KFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKL 738

Query: 394 ENMDKAFALVSKMENQGLV-----------------------------------PDVITY 418
             ++ A  L++ ++++G V                                   P+++TY
Sbjct: 739 GRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTY 798

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N ++ G C+ G +  +  +  ++  KG++P+  TY TLI+ H     + EAF+    M++
Sbjct: 799 NSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIE 858

Query: 479 RGFVP 483
            G  P
Sbjct: 859 EGIHP 863



 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 282/545 (51%), Gaps = 61/545 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  +++ A   L EM    +  +   YN +IN YC+ G + EA  +++ M+G G
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  ++YNSL++G CKKG  ++A E  + ML+ G +  T TYN LL   C   ++ +A 
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++  M ++G+AP+ +S STL+  F ++G+ ++AL  ++E  + GL  +   +  +ING 
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGL 534

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR----------------------- 217
           C+   + EA ++ D+M +  C  D++TY T+ +G C+                       
Sbjct: 535 CKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTI 594

Query: 218 ------------AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                       AK   + +D+  EM  RG+ P+   +  LI G CK+G+++ A NL+  
Sbjct: 595 EFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLE 654

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY--------------- 310
           M +K + P++   ++L+  F + G+ ++AN +  +++   + P+                
Sbjct: 655 MIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFID 714

Query: 311 -----------ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                      I + I+I G C +G + +A  L  ++  KG      + +++I G   SG
Sbjct: 715 TVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASG 774

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A +    M+S G+ P+ ++YN+LI G  +   + +A +L  K+  +G+ P+ ITYN
Sbjct: 775 FVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYN 834

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++   C+ G + ++  +  RMIE+G++P   TY+ LING  +Q  ++EA +  D+M++ 
Sbjct: 835 TLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIEN 894

Query: 480 GFVPD 484
              P+
Sbjct: 895 NVDPN 899



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 265/525 (50%), Gaps = 67/525 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  CK  ++  A   L EM   GV PDT +YN+L++ YC++G + +AF+  N+M   G
Sbjct: 390 MINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNG 449

Query: 61  LKPGVFTYNSLINGLC-----------------------------------KKGRCDRAK 85
                 TYN+L+ G C                                   K G+ ++A 
Sbjct: 450 FAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKAL 509

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +  E L  GL+ +T T+NT++   C+ E M EAEE+  +M +    PDI+++ TL   +
Sbjct: 510 NLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGY 569

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCV 202
            + G +DRA     E+++ G  P    +  +I G+    ++G V + L    EM  +G  
Sbjct: 570 CKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILF---EMSNRGLS 626

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            + V Y  ++ G C+   L  A +L+ EM+E+G+ P+ +  ++L+    + G  ++A  +
Sbjct: 627 PNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLV 686

Query: 263 FDIMTQKSIKPDI--------------------------VTYNTLIDGFCKVGEMEKANK 296
              +    + PDI                          + +N +I G CK+G +E A  
Sbjct: 687 LQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKN 746

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L AD+  +    +  +Y  LI+G  + G V  AF L   M+  G+ P +V+ N++I G C
Sbjct: 747 LLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLC 806

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           +SG+ S+A     K+ ++G+ P++I+YNTLI+   ++  + +AF L  +M  +G+ P V 
Sbjct: 807 KSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVF 866

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           TY++++ G C QG M ++  +L +MIE  ++P+  TY TLI G+V
Sbjct: 867 TYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYV 911



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 220/397 (55%), Gaps = 9/397 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  ++  A+  + +M+Q    PD +TY TL + YC+ G ++ A +++N +   G
Sbjct: 530 VINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLG 589

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +  +NSLI G     +  +  ++L EM   GLSP+T  Y  L+   C++ ++  A 
Sbjct: 590 FAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAY 649

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM  +G+ P++   S+L+  F R G+ D A +  + +    ++PD     + I   
Sbjct: 650 NLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIG-- 707

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                  +     D +         + +N ++ GLC+   + +A +L  ++ ++G   D 
Sbjct: 708 -------KVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADN 760

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LIHG    G ++ A +L D M    + P+IVTYN+LI G CK GE+ +A  L+  
Sbjct: 761 FTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKK 820

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + ++ ISPN I+Y  LI+ +C  G++TEAF+L   M+ +GI PT+ + + +I G C  G 
Sbjct: 821 LWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGY 880

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
             +A + L +M+   VDP+ ++Y TLI G+VR E++D
Sbjct: 881 MEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVD 917



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 207/391 (52%), Gaps = 3/391 (0%)

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
            S   A+++ LL        +  A ++F EM   G    + S ++++   ++ G L   +
Sbjct: 169 FSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATV 228

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
             F +M+ AG +PD     I+   YC+   V+ AL+  +EM + G  +++V Y+ ++NG 
Sbjct: 229 AVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGY 288

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPD 274
           C      +A  + + +  RG  P+  T+T L+ G+C + NM +A  +  +I   K +  D
Sbjct: 289 CEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVD 348

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
              +  +I+G+C++G ME A +L  +M+  ++  N   Y I+INGYC +G + EA  + +
Sbjct: 349 EAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILH 408

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM G G++P   S N+++ GYC+ G  +KA E  + M+  G    +++YN L+ GF    
Sbjct: 409 EMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLG 468

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTY 453
           ++D A  L   M  +G+ P+ I+ + +L GF + G+  +  L LW+  + +GL  + +T+
Sbjct: 469 SIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKT-EKALNLWKETLARGLAKNTTTF 527

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            T+ING      + EA    D+M Q    PD
Sbjct: 528 NTVINGLCKIERMPEAEELVDKMKQWRCPPD 558



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 71/136 (52%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   G+ P+ VTYN+LI   C+ G L  A  L   +  KG+ P   TYN+LI+  CK G 
Sbjct: 786 MLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGY 845

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A ++   M++ G+ P   TY+ L+   C +  M EA ++  +M    V P+ V++ T
Sbjct: 846 ITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWT 905

Query: 141 LIGIFSRNGQLDRALM 156
           LI  + R   +D  +M
Sbjct: 906 LIQGYVRCESVDVPIM 921



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 87/168 (51%)

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           + ++ S +  S+ +L+    + G +  A +++ EM   G + ++ SCN+I+    ++GD 
Sbjct: 165 VYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDL 224

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
                   +M   G  PD  +   +   + + + +  A   V +M   G+  +++ Y+ +
Sbjct: 225 GATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAV 284

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           + G+C  G+ +D+  +L  +  +G +P+  TYT L+ G+ ++ N++EA
Sbjct: 285 MNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEA 332


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 253/451 (56%), Gaps = 16/451 (3%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M++ G  P++VT+N L+N + ++G   +  +L+ +M+ + ++P V +YN L+ GLCK  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 81  CDRAKEVLDEMLQMG--LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
              A+E++ +M+  G   +PD  TY+TLL   C+   + E+ E+  E+  RG+ PD + +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + ++    ++ +L  AL    EM  AG  P  + +  +I+G CR     + L+M D +L+
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCRE----KNLEMADSLLQ 176

Query: 199 K----GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           K    G   DVVTYNT+++GLC+A  L EA+ L   M   G  PD   +++ ++G CK G
Sbjct: 177 KMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISY 313
            +  A  + + M      P++VTYNT++DG CK G+++ A ++   M S      N + Y
Sbjct: 237 KVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGY 296

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             +++G C +G   EA  +   M   G +P +V+ ++++ G C++G   +A E + +M  
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV-----PDVITYNVILTGFCRQ 428
           EG  P++++Y +L++G      + +A  +V +M + G       P V TYN ++ G C+ 
Sbjct: 357 EGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKA 416

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           GR+ D+     RM  +G +PD  +Y+T++ G
Sbjct: 417 GRIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 135/414 (32%), Positives = 240/414 (57%), Gaps = 8/414 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++  LCK  +   A+  + +M  +G    PD VTY+TL++ YC+ G +EE+ +L+  +  
Sbjct: 51  LLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVIS 110

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +GL+P    Y  ++  LCK  R   A E+L+EM++ G  P   T+NTL+   CR++N+  
Sbjct: 111 RGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEM 170

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A+ +  +M+  GV  D+V+++TL+    + G+L  A      MK++G  PD V Y+  + 
Sbjct: 171 ADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER-GVF 237
           G C++G VL+A ++ ++M +     +VVTYNTIL+GLC++  +  A ++  +M    G  
Sbjct: 231 GLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG 290

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            +   ++T++ G CK G   +A ++ + M +   +PD+VTY++L++G CK G++E+A + 
Sbjct: 291 LNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM-----VGKGIKPTLVSCNTII 352
             +M      PN ++Y  L++G CS G + EA R+  EM      G    P++ + N +I
Sbjct: 351 VREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALI 410

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
            G C++G    A +F  +M S+G DPD +SY+T++ G  R     +A  ++S++
Sbjct: 411 GGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 231/437 (52%), Gaps = 8/437 (1%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M   G  P   T+N+L+NG  K+GR    + +L+ M    + P+  +YN LL   C+ E 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 116 MSEAEEIFCEMSRRG--VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
             EAEE+  +M  RG    PD+V++STL+  + + G+++ +    +E+ S GL PD ++Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           T ++   C++  + EAL++ +EM+  GC   ++T+NT+++G CR K L  AD L  +M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            GV  D  T+ TL+ G CK G + +A  L + M      PD+V Y++ + G CK G++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSCNTII 352
           A+++   M      PN ++Y  +++G C  G +  A  +  +M    G    +V  +T++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G C+ G   +A   +  M   G  PD ++Y++L+NG  +   +++A   V +M  +G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN-----PDRSTYTTLINGHVSQNNLK 467
           P+ +TY  ++ G C  GR+ ++E ++  M   G       P  STY  LI G      + 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 468 EAFRFHDEMLQRGFVPD 484
           +A +F   M  +G  PD
Sbjct: 421 DALKFFQRMRSQGCDPD 437



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 5/167 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK  +   A+  +  M + G  PD VTY++L+N  C+ G +EEA + +  M+ +G
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-----LSPDTATYNTLLVESCRKEN 115
            KP   TY SL++GLC  GR   A+ +++EM   G       P  +TYN L+   C+   
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGR 418

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
           + +A + F  M  +G  PD VS+ST++   +R+G+  +A M   E++
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 250/448 (55%), Gaps = 1/448 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           + +  VYP   TYN +IN  C+ G L+E+ ++ N M      P +FT++S+I+GL K G 
Sbjct: 246 LTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGN 305

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A++V  EM++ GLSPD  TYN +L    R   +++  E++  MS+     +IVS++ 
Sbjct: 306 FNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNM 364

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI     N ++++A+ Y++ +   GL  D+  Y ++ING C+NG++ +AL++ +E   +G
Sbjct: 365 LIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEG 424

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
             +D   Y+++++GLC+  ML +A +L ++M +     + + F +LI+G+ +   + +A+
Sbjct: 425 ADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAI 484

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           ++   M  K   P +V+YNT+I+G CK      A     +M+   + P+ I+Y +LI+G 
Sbjct: 485 SVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGL 544

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C    V  A  LW++ + K +KP L   N II G C +     A E  ++M      PD 
Sbjct: 545 CRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDL 604

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           +++NT++ G  +  +  +A  +  ++   GL PD+I+YN+   G C   R+ D+   L+ 
Sbjct: 605 VTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYD 664

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            +++G+ P+  T+  L+   V    L E
Sbjct: 665 ALDRGILPNAPTWNVLVRAVVDDKPLME 692



 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 253/461 (54%), Gaps = 2/461 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G  P   ++N+++NA+       EA          G+ P + TYN LI   CKK + ++ 
Sbjct: 109 GCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKG 168

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           K +L  M + GL+PD  +Y TL+    +  N+ +A E+F EMS RGV PD++ ++ LI  
Sbjct: 169 KGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDG 228

Query: 145 FSRNGQLDRA-LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
           F R G   +A  ++ R +  + + P    Y I+ING C+ G + E+++M + M +     
Sbjct: 229 FLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSP 288

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D+ T++++++GL +A     A+ +F EM+E G+ PD  T+  ++ G  + G +NK   L+
Sbjct: 289 DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW 348

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           ++M++ +   +IV+YN LI G     ++E+A   W  +  R +  +  +YG+LING C  
Sbjct: 349 NVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKN 407

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G++ +A R+  E   +G      + ++++ G C+ G   +A E + +M       +S  +
Sbjct: 408 GYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVF 467

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N+LING+VR   +++A +++ +M+++   P V++YN I+ G C+  R  D+ L L  M+E
Sbjct: 468 NSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLE 527

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +GL PD  TY+ LI+G      +  A     + + +   PD
Sbjct: 528 EGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPD 568



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 257/520 (49%), Gaps = 37/520 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+NA  + ++   A++F    +  G+ P+  TYN LI   C++   E+   L+  M   G
Sbjct: 120 MLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENG 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT--------------- 105
           L P + +Y +LIN L K G    A E+ DEM   G++PD   YN                
Sbjct: 180 LNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKAN 239

Query: 106 -----LLVES----------------CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
                LL ES                C+   + E+ E++  M +   +PD+ +FS++I  
Sbjct: 240 EIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHG 299

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
            S+ G  + A   F+EM  +GL PD   Y  +++G  R G + +  ++ + M +  C  +
Sbjct: 300 LSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-N 358

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +V+YN ++ GL   K + +A   +  + ERG+  D  T+  LI+G CK+G +NKAL + +
Sbjct: 359 IVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILE 418

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
               +    D   Y++++ G CK G +E+A +L   M   +   N   +  LINGY    
Sbjct: 419 EAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAF 478

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA  +  EM  K   PT+VS NTII G C++   S A   L +M+ EG+ PD I+Y+
Sbjct: 479 KLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYS 538

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI+G  R E +D A  L  +  N+ L PD+  +N+I+ G C   ++  +  I  +M + 
Sbjct: 539 LLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQV 598

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              PD  T+ T++ G     +  EA +  D +L+ G  PD
Sbjct: 599 NCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPD 638



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 259/519 (49%), Gaps = 35/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  + +  K  L  M + G+ PD ++Y TLINA  + G L +A +L + MS +G
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG 214

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSEA 119
           + P V  YN LI+G  +KG   +A E+   +L +  + P   TYN ++   C+   + E+
Sbjct: 215 VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDES 274

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD---------- 169
            E++  M +   +PD+ +FS++I   S+ G  + A   F+EM  +GL PD          
Sbjct: 275 MEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSG 334

Query: 170 --------------NVL----------YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                         NV+          Y ++I G   N  V +A+     + E+G   D 
Sbjct: 335 LFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 394

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TY  ++NGLC+   L +A  +  E    G   D + +++++HG CK G + +A+ L   
Sbjct: 395 TTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQ 454

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +   K +   +N+LI+G+ +  ++E+A  +  +M S+  +P  +SY  +ING C    
Sbjct: 455 MKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAER 514

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
            ++A+    EM+ +G+KP +++ + +I G CR      A     + +++ + PD   +N 
Sbjct: 515 FSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNI 574

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+G    + +D A  + ++M     VPD++T+N I+ G  + G   ++  I  R++E G
Sbjct: 575 IIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAG 634

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L PD  +Y     G  S   + +A  F  + L RG +P+
Sbjct: 635 LQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPN 673



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 171/319 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L  + K++ A  +   + ++G+  D+ TY  LIN  C+ G+L +A +++     +G
Sbjct: 365 LIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEG 424

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                F Y+S+++GLCKKG  ++A E++ +M +     ++  +N+L+    R   + EA 
Sbjct: 425 ADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAI 484

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +  AP +VS++T+I    +  +   A +  +EM   GL PD + Y+++I+G 
Sbjct: 485 SVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGL 544

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   V  AL +  + + K    D+  +N I++GLC A+ +  A ++F +M +    PD 
Sbjct: 545 CRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDL 604

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T  T++ G  K G+  +AL ++D + +  ++PDI++YN    G C    +  A +   D
Sbjct: 605 VTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYD 664

Query: 301 MISRKISPNYISYGILING 319
            + R I PN  ++ +L+  
Sbjct: 665 ALDRGILPNAPTWNVLVRA 683



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 138/262 (52%), Gaps = 1/262 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LCK   ++ A   + +M++     ++  +N+LIN Y R   LEEA  ++  M  K 
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKD 494

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V +YN++INGLCK  R   A   L EML+ GL PD  TY+ L+   CR E +  A 
Sbjct: 495 CAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMAL 554

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +   + + PD+   + +I       ++D AL  F +M+    VPD V +  I+ G 
Sbjct: 555 NLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGL 614

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G  +EALK+ D +LE G   D+++YN    GLC    +++A +   + L+RG+ P+ 
Sbjct: 615 YKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNA 674

Query: 241 YTFTTLIHGHCKDGN-MNKALN 261
            T+  L+     D   M  ALN
Sbjct: 675 PTWNVLVRAVVDDKPLMEYALN 696


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 248/462 (53%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
            K   P T  +N ++++  +      A  L   M   G++   FT+N LIN   + G   
Sbjct: 54  HKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNS 113

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            +  +  ++L+ G  P   T+NTL+   C K ++ +A     ++  +G   D VS+ TLI
Sbjct: 114 LSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLI 173

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               + G++  AL   + +    + P+ V+Y +II+  C+   V +A  +  +M+ K   
Sbjct: 174 NGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIC 233

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DV TYN +++G      L  A DLFN+M +  + P+ YTF  L+ G CK+G +N A  +
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
             IM +  IKPD+VTYN+L+DG+C + ++ KA  ++  M S  +  N   Y  ++NG+C 
Sbjct: 294 LAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCK 353

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +  V EA  L+ EM  + I P +V+ +++I G C+ G    A + + +M   G  P+ ++
Sbjct: 354 IKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVT 413

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y+++++   +  ++DKA AL++ +++QG+ PD+ TY +++ G C+ GR+ D++ +   ++
Sbjct: 414 YSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLL 473

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            KG N D   YT +I G   +    +A     +M   G +P+
Sbjct: 474 VKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 240/424 (56%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +KG +P  +T+NTLI   C +G + +A    + +  +G      +Y +LINGLCK GR  
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A ++L  +    + P+   YN ++   C+ + +++A +++ +M  + + PD+ +++ LI
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALI 243

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             FS   +L+ A+  F +MK   + P+   + I+++G+C+ G V +A  +   M++    
Sbjct: 244 SGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIK 303

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DVVTYN++++G C    + +A D+F+ M   GV  +   +TT+++G CK   +++A+NL
Sbjct: 304 PDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINL 363

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M  + I P++VTY++LIDG CK+G +  A KL  +M  R   PN ++Y  +++  C 
Sbjct: 364 FEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCK 423

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
             HV +A  L   +  +GI+P + +   +IKG C+SG    A      ++ +G + D  +
Sbjct: 424 NHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYA 483

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y  +I GF  +   DKA AL+SKME+ G +P+  TY +++     +     +E +L  MI
Sbjct: 484 YTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMI 543

Query: 443 EKGL 446
            +GL
Sbjct: 544 VRGL 547



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 127/251 (50%), Gaps = 3/251 (1%)

Query: 235 GVFPD-FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           G+FP     F+ L H   ++ N+  + N   ++  K+  P    +N ++    K      
Sbjct: 22  GLFPSSIRLFSQLHHKQDEENNLISSFN--HLLLHKNPTPPTFQFNKILSSLVKAKHHST 79

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L   M    I  ++ ++ ILIN +  +G  + +F ++ +++ KG  PT ++ NT+IK
Sbjct: 80  ALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIK 139

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G C  G   +A  F  K+V++G   D +SY TLING  +   +  A  L+ +++ + + P
Sbjct: 140 GLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP 199

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           + + YN+I+   C+   ++D+  +  +M+ K + PD  TY  LI+G  + + L  A    
Sbjct: 200 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLF 259

Query: 474 DEMLQRGFVPD 484
           ++M +    P+
Sbjct: 260 NKMKKENINPN 270


>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
 gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
          Length = 808

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 263/476 (55%), Gaps = 2/476 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG-LKPGVFTY 68
           K D A     EME  G+ P   +++ LI+  C++  + EA   +  +  +G   P   T+
Sbjct: 195 KADVALEIFKEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTF 254

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N+L++ LC  G    AK V   ML+ GL+P   TY+T++   C+  ++SEA  IF  ++ 
Sbjct: 255 NTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTE 314

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G+  DIV+ ++LI  F  +G           M+  G+ PD V YTI+I G+C  G V E
Sbjct: 315 EGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEE 374

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
            +K+R ++L +G  +++VTY+ ++N L +  +  E ++L  E+   G+  D   ++ LIH
Sbjct: 375 GMKIRKDILGQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIH 434

Query: 249 GHCKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           G+ K G + +AL ++++M + + + P  V + +++ G CK G +++A      + S+   
Sbjct: 435 GYSKLGEIGRALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQP 494

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            + + Y ++I+GY  +G +  A +L+  ++  G+ PT+V+CN+++ GYC+ GD   A+ +
Sbjct: 495 SDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESY 554

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
            + +    + P +++Y TL++       +    +L  +M  +G+ P+ +TY+V++ G C+
Sbjct: 555 FTAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCK 614

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           Q   HD++ +L  M  +G + D   Y TLI G     + K AF  ++ M+ RG +P
Sbjct: 615 QFMFHDAKNVLDDMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMP 670



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 242/520 (46%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC    I  AK   C M + G+ P   TY+T+I+  C+ G + EAF +  S++ +G
Sbjct: 257 LMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEG 316

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC--------- 111
           ++  + T NSLING    G      ++++ M  +G+ PD  TY  L+   C         
Sbjct: 317 MELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGM 376

Query: 112 --RKENMS------------------------EAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
             RK+ +                         E E +  E+   G+  D++++S LI  +
Sbjct: 377 KIRKDILGQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGY 436

Query: 146 SRNGQLDRALMYFREMKSAGLV-PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           S+ G++ RAL  +  M S+  V P +V +  I+ G C+ GF+ EA    + +  K    D
Sbjct: 437 SKLGEIGRALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSD 496

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VV YN +++G  +   +  A  L++ ++  G+ P   T  +L++G+CK G+++ A + F 
Sbjct: 497 VVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFT 556

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            +    + P  VTY TL+D   + G++     L+ +M  + I PN ++Y ++I G C   
Sbjct: 557 AIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQF 616

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
              +A  +  +M  +G     +  NT+I+G+C + DA  A      MV  GV P  ++YN
Sbjct: 617 MFHDAKNVLDDMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYN 676

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L+N    +  +  A   +     QG       Y  ++   C +G  + + +   ++++ 
Sbjct: 677 LLVNVLCSKGLVIHAEMQLESFRKQGAKLRKFAYITLIKAQCAKGMPYKAIMWFGKLLDA 736

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G       ++  IN    +   KEA      ML  G  PD
Sbjct: 737 GFEASIEDFSAAINRLCKRQFTKEALMLVPIMLSVGVYPD 776



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 210/447 (46%), Gaps = 1/447 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   GV PD VTY  LI  +C  G +EE  ++   + G+G++  + TY+ LIN L KKG 
Sbjct: 347 MRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALFKKGL 406

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVSFS 139
               + +L E+  +GL  D   Y+ L+    +   +  A +++  M S + V P  V+  
Sbjct: 407 FYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLMCSSQRVTPTSVNHV 466

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           +++    + G LD A  Y   + S     D VLY ++I+GY + G +  A+++ D ++  
Sbjct: 467 SILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMA 526

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G    +VT N++L G C+   L  A+  F  +    + P   T+TTL+    + G ++  
Sbjct: 527 GMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTYTTLMDALSEAGKVHSM 586

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L+LF  MT K IKP+ VTY+ +I G CK      A  +  DM       + I Y  LI G
Sbjct: 587 LSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEGFDADPIPYNTLIQG 646

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C       AF ++  MV +G+ PT V+ N ++   C  G    A+  L     +G    
Sbjct: 647 FCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAEMQLESFRKQGAKLR 706

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +Y TLI     +    KA     K+ + G    +  ++  +   C++    ++ +++ 
Sbjct: 707 KFAYITLIKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFSAAINRLCKRQFTKEALMLVP 766

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNL 466
            M+  G+ PD   Y  L      +N L
Sbjct: 767 IMLSVGVYPDVELYRVLGTAVQKKNEL 793



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 212/387 (54%), Gaps = 5/387 (1%)

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
           ++  ++ L     R +   +A  +  +MS   +   I ++ +L+    +    D AL  F
Sbjct: 147 NSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSLRKA---DVALEIF 203

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV-VTYNTILNGLCR 217
           +EM+S G+ P +  ++I+I+G C+   + EAL    E+ ++G  + + +T+NT+++ LC 
Sbjct: 204 KEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCN 263

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              + +A  +F  ML+ G+ P  +T++T+IHG CK G++++A N+F  +T++ ++ DIVT
Sbjct: 264 WGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVT 323

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
            N+LI+GF   G   +  K+   M    + P+ ++Y ILI G+C  G V E  ++  +++
Sbjct: 324 CNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDIL 383

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
           G+G++  +V+ + +I    + G   + +  L ++ S G++ D I+Y+ LI+G+ +   + 
Sbjct: 384 GQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIG 443

Query: 398 KAFALVSKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           +A  + + M  +Q + P  + +  IL G C++G + ++   L  +  K    D   Y  +
Sbjct: 444 RALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVV 503

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVP 483
           I+G+    ++  A + +D ++  G  P
Sbjct: 504 IDGYAKVGDIGNAVQLYDAIIMAGMCP 530



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 112/241 (46%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK   +  A+ +   ++   + P TVTY TL++A    G +     L   M+GKG+KP  
Sbjct: 543 CKFGDLHMAESYFTAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNA 602

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TY+ +I GLCK+     AK VLD+M   G   D   YNTL+   C  ++   A  ++  
Sbjct: 603 VTYSVVIKGLCKQFMFHDAKNVLDDMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVYEL 662

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  RGV P  V+++ L+ +    G +  A M     +  G       Y  +I   C  G 
Sbjct: 663 MVFRGVMPTPVTYNLLVNVLCSKGLVIHAEMQLESFRKQGAKLRKFAYITLIKAQCAKGM 722

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
             +A+    ++L+ G    +  ++  +N LC+ +   EA  L   ML  GV+PD   +  
Sbjct: 723 PYKAIMWFGKLLDAGFEASIEDFSAAINRLCKRQFTKEALMLVPIMLSVGVYPDVELYRV 782

Query: 246 L 246
           L
Sbjct: 783 L 783



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 139/313 (44%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            LCK   +D A+ +L  +  K    D V YN +I+ Y + G +  A QL +++   G+ P
Sbjct: 471 GLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCP 530

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + T NSL+ G CK G    A+     +    L P T TY TL+        +     +F
Sbjct: 531 TIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSLF 590

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM+ +G+ P+ V++S +I    +      A     +M   G   D + Y  +I G+C  
Sbjct: 591 KEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEGFDADPIPYNTLIQGFCET 650

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
                A  + + M+ +G +   VTYN ++N LC   ++  A+       ++G     + +
Sbjct: 651 QDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAEMQLESFRKQGAKLRKFAY 710

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            TLI   C  G   KA+  F  +     +  I  ++  I+  CK    ++A  L   M+S
Sbjct: 711 ITLIKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFSAAINRLCKRQFTKEALMLVPIMLS 770

Query: 304 RKISPNYISYGIL 316
             + P+   Y +L
Sbjct: 771 VGVYPDVELYRVL 783



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 95/189 (50%), Gaps = 6/189 (3%)

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           LW+    ++   N I +  L N Y       +A  +  +M    ++ ++ + ++++    
Sbjct: 137 LWSGF--KEWDSNSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSL- 193

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG-LVPDV 415
           R  D   A E   +M S G+ P   S++ LI+G  +++ + +A + + ++  +G  +P  
Sbjct: 194 RKADV--ALEIFKEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLG 251

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           +T+N +++  C  G + D++ +   M++ GLNP R TY+T+I+G     ++ EAF     
Sbjct: 252 MTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQS 311

Query: 476 MLQRGFVPD 484
           + + G   D
Sbjct: 312 VTEEGMELD 320



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 6/231 (2%)

Query: 257 NKALNLFDIMTQ--KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
           + A  L DI+    K    + + ++ L + + +      A  + + M S  +  +  +Y 
Sbjct: 128 DSAPTLCDILWSGFKEWDSNSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYD 187

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            L+    S+     A  ++ EM   GI P+  S + +I G C+     +A  FL ++  E
Sbjct: 188 SLLY---SLRKADVALEIFKEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKE 244

Query: 375 G-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
           G   P  +++NTL++       +  A ++   M   GL P   TY+ I+ G C+ G + +
Sbjct: 245 GKFIPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSE 304

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  I   + E+G+  D  T  +LING     + +E  +  + M   G  PD
Sbjct: 305 AFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPD 355


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 252/492 (51%), Gaps = 22/492 (4%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
            K+   K  L  M  +G YP    +N+L++AYCR G    A++L+  M   G +PG   Y
Sbjct: 91  EKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVY 150

Query: 69  NSLINGLCK-----KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
           N LI G+C      K   D A++   EML+ G+  +    +      C      +A  + 
Sbjct: 151 NILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVI 210

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM  +G  PD  ++S +IG      ++++A   F+EMK  G+ PD  +YT +I+ +C+ 
Sbjct: 211 REMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKA 270

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           GF+ +A    DEM   GC  +VVTY  +++   +++ +++A++++  ML +G  P+  T+
Sbjct: 271 GFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTY 330

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIK-----------------PDIVTYNTLIDGFC 286
           T LI G CK G + KA  ++ IM +++++                 P++ TY  L+DG C
Sbjct: 331 TALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLC 390

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K  ++++A  L   M      PN++ Y  LI+G C  G + EA  ++  M+  G  P + 
Sbjct: 391 KAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVY 450

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + +++I    +      A + LSKM+     P+ + Y  +I+G  +    D+A+ L+  M
Sbjct: 451 TYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMM 510

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           E +G  P+V+TY  ++ GF + GR+     +L +M  KG  P+  TY  LIN   S   L
Sbjct: 511 EEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLL 570

Query: 467 KEAFRFHDEMLQ 478
            EA +  +EM Q
Sbjct: 571 DEAHKLLEEMKQ 582



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 252/506 (49%), Gaps = 22/506 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LC+    + A  FL  M      P+ +TY  L+     +  L    ++++ M  +G
Sbjct: 48  MISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEG 107

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN----- 115
             P    +NSL++  C+ G    A ++L +M+Q G  P    YN L+   C  E      
Sbjct: 108 CYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDV 167

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +  AE+ + EM   GV  + V+ S         G+ ++A    REM S G +PD   Y+ 
Sbjct: 168 LDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSK 227

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I   C    V +A ++  EM   G   DV  Y T+++  C+A  + +A + F+EM   G
Sbjct: 228 VIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDG 287

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  T+T LIH + K   ++KA  ++++M  K   P+IVTY  LIDG CK G++EKA+
Sbjct: 288 CAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKAS 347

Query: 296 KLW------------ADMISRKI-----SPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           +++             DM  R +      PN  +YG L++G C    V EA  L   M  
Sbjct: 348 QIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSV 407

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           +G +P  V  + +I G C++G   +A E  + M+  G DP+  +Y++LI+   +++ +D 
Sbjct: 408 EGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDL 467

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  ++SKM      P+V+ Y  ++ G C+ G+  ++  ++  M EKG NP+  TYT +I+
Sbjct: 468 ALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMID 527

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G      +++      +M  +G  P+
Sbjct: 528 GFGKSGRVEKCLELLQQMSSKGCAPN 553



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 246/502 (49%), Gaps = 27/502 (5%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K + A   + EM  KG  PDT TY+ +I   C    +E+AFQL   M   G+ P 
Sbjct: 197 LCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPD 256

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+ Y +LI+  CK G  ++A+   DEM + G +P+  TY  L+    +   +S+A E++ 
Sbjct: 257 VYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE 316

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-----------------MYFREMKSAGLV 167
            M  +G  P+IV+++ LI    + G++++A                  M+FR +  A   
Sbjct: 317 MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNE 376

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
           P+   Y  +++G C+   V EA  +   M  +GC  + V Y+ +++G C+A  L EA ++
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           F  MLE G  P+ YT+++LI    KD  ++ AL +   M + S  P++V Y  +IDG CK
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
           VG+ ++A KL   M  +  +PN ++Y  +I+G+   G V +   L  +M  KG  P  V+
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              +I   C +G   +A + L +M           Y  +I GF RE     +  L  ++ 
Sbjct: 557 YRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNRE--FIASLYLSFEIS 614

Query: 408 NQGLVPDVITYNVILTGFCRQGRMH-----DSELILWRMIEKGLNPDRSTYTTLINGHVS 462
               VP    Y V++  F + GR+      + EL  +         +++ + TLI     
Sbjct: 615 ENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAA---NQNIHITLIENLSL 671

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
            +   +AF  + +M+ RG +P+
Sbjct: 672 AHKADKAFELYADMISRGSIPE 693



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 201/427 (47%), Gaps = 25/427 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS--- 57
           +++A  K  K+  A      M  KG  P+ VTY  LI+  C+ G +E+A Q+   M    
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKEN 357

Query: 58  --------------GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY 103
                         G   +P VFTY +L++GLCK  +   A+++L  M   G  P+   Y
Sbjct: 358 VEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVY 417

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           + L+   C+   + EA+E+F  M   G  P++ ++S+LI    ++ +LD AL    +M  
Sbjct: 418 DALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE 477

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
               P+ V+YT +I+G C+ G   EA K+   M EKGC  +VVTY  +++G  ++  + +
Sbjct: 478 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEK 537

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
             +L  +M  +G  P+F T+  LI+  C  G +++A  L + M Q      +  Y  +I+
Sbjct: 538 CLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIE 597

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           GF +  E   +  L  ++      P    Y +LI+ +   G +  A  L  E+      P
Sbjct: 598 GFNR--EFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEEL--SSFSP 653

Query: 344 TLVSCN----TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
              +      T+I+    +  A KA E  + M+S G  P+      LI G +R    ++A
Sbjct: 654 FSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEA 713

Query: 400 FALVSKM 406
             L+  +
Sbjct: 714 LQLLDSI 720



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 165/365 (45%), Gaps = 9/365 (2%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           MS  G   D  +         ++G+   AL    + +    VPD VLYT +I+G C    
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEE---FVPDTVLYTKMISGLCEASL 57

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
             EA+     M    C+ +V+TY  +L G    + L     + + M+  G +P    F +
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE-----MEKANKLWAD 300
           L+H +C+ G+   A  L   M Q   +P  V YN LI G C   E     ++ A K + +
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   +  N ++        C +G   +A+ +  EM+ KG  P   + + +I   C +  
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA +   +M   G+ PD   Y TLI+ F +   +++A     +ME  G  P+V+TY  
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++  + +  ++  +  +   M+ KG  P+  TYT LI+G      +++A + +  M +  
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKEN 357

Query: 481 F-VPD 484
             +PD
Sbjct: 358 VEIPD 362


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 261/486 (53%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C    ++ A     E+ + GV PD V ++ LIN   + G +E+A++L   M   G
Sbjct: 331 LMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMG 390

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P VF  NSL+ G  ++   + A  + DE ++ G++ +  TYN LL        ++EA 
Sbjct: 391 IQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEAC 449

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +M  +G+ P +VS++ LI    + G +D+A    + +   GL P+ V YT++I+G+
Sbjct: 450 NLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGF 509

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A  + ++M+         T+NT++NGL +   ++E  D  N  +++G     
Sbjct: 510 FKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTS 569

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I G  K+G ++ AL  +  M +  I PD++TY +LIDG CK  ++  A ++ +D
Sbjct: 570 ITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSD 629

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + +  + ++Y  LI+G+C M  +  A + + E++  G+ P  V  N++I G+    +
Sbjct: 630 MKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNN 689

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +M+   V  D   Y ++I G ++E  +  A  L S+M ++ +VPD++ Y V
Sbjct: 690 MEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTV 749

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G    G++ ++  IL  M    + P    Y  LI G+  + NL+EAFR HDEML +G
Sbjct: 750 LINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKG 809

Query: 481 FVPDDA 486
            VPDD 
Sbjct: 810 LVPDDT 815



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 249/461 (54%), Gaps = 1/461 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   K   ++ A      M+  G+ P+    N+L+  +  +  LE A+ L +     G
Sbjct: 366 LINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG 425

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V TYN L+  L + G+ + A  + ++M+  G++P   +YN L++  C+K  M +A 
Sbjct: 426 IT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAY 484

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   +  RG+ P+ V+++ LI  F + G  +RA + F +M +A + P +  +  +ING 
Sbjct: 485 SMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGL 544

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V E     +  +++G V   +TYN+I++G  +   +  A   + EM E G+ PD 
Sbjct: 545 GKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDV 604

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI G CK   +  AL +   M  K +K D+V Y+ LIDGFCK+ +ME A+K + +
Sbjct: 605 ITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTE 664

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++   ++PN + Y  +I+G+  + ++  A  L  EM+   +   L    +II G  + G 
Sbjct: 665 LLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGK 724

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A +  S+M+S+ + PD + Y  LING      ++ A  ++ +M+   + P V+ YN+
Sbjct: 725 LSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNI 784

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           ++ G  R+G + ++  +   M++KGL PD +TY  L+NG +
Sbjct: 785 LIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 825



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 160/513 (31%), Positives = 264/513 (51%), Gaps = 44/513 (8%)

Query: 13  SAKMFL-CEMEQKGVY---PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           SAK+F+ C +E  G Y    D+  +N L+ ++ R   + +A +   +M    L P V   
Sbjct: 129 SAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIM 188

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEAEEIFCEMS 127
           N+L+  + ++     A+++ DEM++ G+  D  T + ++  +C KE    E E+ F E  
Sbjct: 189 NNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVM-RACMKEGKFEEVEKFFKEAK 247

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
            RG+  D  ++S L+    R   L+ A    +EM+  G VP    YT +I    + G  +
Sbjct: 248 GRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFV 307

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EAL+++DEM+  G  M+V+   +++ G C    +  A  LF+E++E GV PD   F+ LI
Sbjct: 308 EALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLI 367

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +G  K G+M KA  L+  M    I+P++   N+L++GF +   +E A  L+ + +   I+
Sbjct: 368 NGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT 427

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            N ++Y IL+     +G V EA  LW +MV KGI P+LVS N +I G+C+ G   KA   
Sbjct: 428 -NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSM 486

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME-------------------- 407
           L  ++  G+ P++++Y  LI+GF ++ + ++AF +  +M                     
Sbjct: 487 LKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGK 546

Query: 408 ---------------NQGLVPDVITYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRS 451
                           QG V   ITYN I+ GF ++G + DS L+ +R M E G++PD  
Sbjct: 547 TGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAV-DSALLAYREMCESGISPDVI 605

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TYT+LI+G    N +  A   H +M  +G   D
Sbjct: 606 TYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLD 638



 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 259/484 (53%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A+ + + +  A+    EM ++G+Y D  T + ++ A  +EG  EE  +      G+G
Sbjct: 191 LLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRG 250

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+     Y+ L+  +C++   + A E+L EM + G  P   TY  ++V   ++ N  EA 
Sbjct: 251 LEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEAL 310

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM   G+  +++   +L+  +   G ++ AL  F E+   G+VPD V+++++ING 
Sbjct: 311 RLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGC 370

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + +A ++   M   G   +V   N++L G     +L  A  LF+E +E G+  + 
Sbjct: 371 SKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNV 429

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L+    + G +N+A NL++ M  K I P +V+YN LI G CK G M+KA  +   
Sbjct: 430 VTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKS 489

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ R + PN ++Y +LI+G+   G    AF ++ +M+   I PT  + NT+I G  ++G 
Sbjct: 490 ILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGR 549

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+  + L+  + +G    SI+YN++I+GF +E  +D A     +M   G+ PDVITY  
Sbjct: 550 VSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTS 609

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+  ++  +  +   M  KG+  D   Y+ LI+G    ++++ A +F  E+L  G
Sbjct: 610 LIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIG 669

Query: 481 FVPD 484
             P+
Sbjct: 670 LTPN 673



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 169/318 (53%), Gaps = 2/318 (0%)

Query: 10  KIDSAKMFLC--EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           K DS + F+   +M    + P   T+NT+IN   + G + E    +N+   +G      T
Sbjct: 512 KGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSIT 571

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           YNS+I+G  K+G  D A     EM + G+SPD  TY +L+   C+   +  A E+  +M 
Sbjct: 572 YNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMK 631

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
            +G+  D+V++S LI  F +   ++ A  +F E+   GL P+ V+Y  +I+G+     + 
Sbjct: 632 YKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNME 691

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            AL +  EM++     D+  Y +I+ GL +   L+ A DL++EML + + PD   +T LI
Sbjct: 692 AALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLI 751

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +G   +G +  A  +   M   +I P ++ YN LI G  + G +++A +L  +M+ + + 
Sbjct: 752 NGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLV 811

Query: 308 PNYISYGILINGYCSMGH 325
           P+  +Y IL+NG   + H
Sbjct: 812 PDDTTYDILVNGKLKVSH 829



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 146/290 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  ++   +  L    ++G    ++TYN++I+ + +EG ++ A      M   G
Sbjct: 540 VINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESG 599

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY SLI+GLCK  +   A E+  +M   G+  D   Y+ L+   C+  +M  A 
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F E+   G+ P+ V ++++I  F     ++ AL   +EM    +  D  +YT II G 
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGL 719

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +  AL +  EML K  V D+V Y  ++NGL     L  A  +  EM    + P  
Sbjct: 720 LKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSV 779

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
             +  LI G+ ++GN+ +A  L D M  K + PD  TY+ L++G  KV  
Sbjct: 780 LVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSH 829



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 5/133 (3%)

Query: 359 GDASKADEFLSKMVSE-----GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           GDA+ + +   + + E     G + DS  +N L+  FVR   +  A      M    LVP
Sbjct: 124 GDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVP 183

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
            V   N +LT   R+  + D+  +   M+E+G+  D  T   ++   + +   +E  +F 
Sbjct: 184 WVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFF 243

Query: 474 DEMLQRGFVPDDA 486
            E   RG   D A
Sbjct: 244 KEAKGRGLEVDAA 256


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 249/474 (52%), Gaps = 20/474 (4%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D+  +F   + Q    P  + +N ++ +  +         L   M  +G+ P +F +  
Sbjct: 58  VDAFSLFSRLLRQNPT-PPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQH 116

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
                                  MG  P+T T+ TL+   C K  + +A      +   G
Sbjct: 117 -------------------PHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMG 157

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
              D V + TLI    + G+   AL   R +    + P+ V+Y+ II+G C++  V +A 
Sbjct: 158 FQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAF 217

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM+ KG   +VVTY+ +++G      L +A DLFN+M+   + PD YTF  L+ G 
Sbjct: 218 DLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGF 277

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CKDG M +   +F +M ++ IKP++VTY +L+DG+C V E+ KA  +   M  R ++P+ 
Sbjct: 278 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDI 337

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            SY ILI+G+C +  V EA  L+ EM  K I P +V+ N++I G C+ G  S A + + +
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE 397

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M   GV PD I+Y+++++   +   +DKA AL++K+++QG+ P++ TY +++ G C+ GR
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGR 457

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + D+  I   ++ KG N   +TYT +I+G  ++    EA     +M     +PD
Sbjct: 458 LEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPD 511



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 239/422 (56%), Gaps = 1/422 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G +P+T+T+ TLI   C +G + +A    +++   G +     Y +LI+GLCK G    A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            ++L  +    + P+   Y+T++   C+ +++++A +++ EM  +G++P++V++S LI  
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F   GQL  A+  F +M    + PD   + I+++G+C++G + E   +   M+++G   +
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VVTY ++++G C  K + +A  +   M +RGV PD  ++  LI G CK   +++A+NLF 
Sbjct: 302 VVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFK 361

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K I PD+VTYN+LIDG CK+G++  A KL  +M  R + P+ I+Y  +++  C   
Sbjct: 362 EMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNH 421

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A  L  ++  +GI+P + +   +I G C+ G    A      ++ +G +    +Y 
Sbjct: 422 QVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 481

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            +I+GF  +   D+A AL+SKM++   +PD +TY +I+     +   +D    L  MI +
Sbjct: 482 VMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDE-NDKAEKLREMITR 540

Query: 445 GL 446
           GL
Sbjct: 541 GL 542



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 222/412 (53%), Gaps = 1/412 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +I  A +F   +   G   D V Y TLI+  C+ G    A  L+  + G  
Sbjct: 133 LIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNL 192

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V  Y+++I+G+CK    + A ++  EM+  G+SP+  TY+ L+        + +A 
Sbjct: 193 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAI 252

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M    + PD+ +F+ L+  F ++G++      F  M   G+ P+ V Y  +++GY
Sbjct: 253 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 312

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V +A  +   M ++G   D+ +YN +++G C+ K + EA +LF EM  + + PD 
Sbjct: 313 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 372

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G CK G ++ AL L D M  + + PDI+TY++++D  CK  +++KA  L   
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 432

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + I PN  +Y ILI+G C  G + +A  ++ +++ KG   T+ +   +I G+C  G 
Sbjct: 433 LKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGL 492

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
             +A   LSKM      PD+++Y  +I     ++  DKA  L  +M  +GL+
Sbjct: 493 FDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL-REMITRGLL 543



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 110/238 (46%), Gaps = 16/238 (6%)

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ +   S K + + Y+++   F    ++  A  L++ ++ +  +P  I +  ++     
Sbjct: 29  FNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVK 88

Query: 323 MGHVTEAFRLWYEMVGKGIKPTL----------------VSCNTIIKGYCRSGDASKADE 366
             H      L  +M  +GI P L                ++  T+IKG C  G   +A  
Sbjct: 89  SKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALL 148

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
           F   +V+ G   D + Y TLI+G  +      A  L+ +++   + P+V+ Y+ I+ G C
Sbjct: 149 FHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMC 208

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   ++D+  +   M+ KG++P+  TY+ LI+G  +   LK+A    ++M+     PD
Sbjct: 209 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPD 266


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 141/426 (33%), Positives = 246/426 (57%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N  C   ++  A   L  + ++G  P+ +T  T++   C  G +++A    ++++ +G+
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
                 Y +LINGLCK GR   A ++L EM    + P+   YN ++   C+ E   +A +
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           ++ ++   G+ PDI+++++LI  F R GQ         EM +  + P+   + ++I+ +C
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R G ++EA  M + M+++G   D+VT+NT+++G C    + EA  LF+ + ERG+ PD +
Sbjct: 306 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 365

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           ++T LI G+CK   +++A++LF+ M  K++  DIV Y++LIDG CK G +  A +L++ +
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            +    PN I+Y ILI+ +C +  +     L+  M GKG+ PT+++ N +I GYC+S   
Sbjct: 426 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A   LS M S+ + PDSI+YN+L +G  +   +  A+ L   M   G   DV TYNV+
Sbjct: 486 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVL 545

Query: 422 LTGFCR 427
           L  FC+
Sbjct: 546 LDAFCK 551



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 242/466 (51%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID A      +      P  + +NT+I +  +      A  L+  M  KG+ P +FT + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
            IN  C  G    A  VL  +L+ G  P+  T  T++   C    + +A +    ++ +G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +  D V + TLI    + G+   A    +EM+   + P+ V+Y +II+ +C++    +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  ++++ G   D++TY +++ G CR     E   L  EM+ + + P+ YTF  LI   
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+ G M +A  +F++M ++  +PDIVT+NTLI G C  G + +A KL+  +  R I P+ 
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            SY ILI GYC    + EA  L+ EM  K +   +V  +++I G C+SG  S A E  S 
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           + ++G  P+ I+YN LI+ F + +++D    L   M  +GL P V+TYN+++ G+C+  R
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKR 484

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           + ++  +L  M  K L PD  TY +L +G      + +A+     M
Sbjct: 485 IREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 530



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 219/396 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC + ++  A  F   +  +G+  D V Y TLIN  C+ G   +AFQL+  M G+ 
Sbjct: 160 VMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQV 219

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP +  YN +I+  CK     +A+++  +++ MG+ PD  TY +L+   CR     E +
Sbjct: 220 VKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVK 279

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++ CEM  + + P++ +F+ LI  F R G++  A   F  M   G  PD V +  +I+G+
Sbjct: 280 QLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGH 339

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G VLEA K+ D + E+G + DV +Y  ++ G C+ K + EA  LFNEM  + +  D 
Sbjct: 340 CLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDI 399

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +++LI G CK G ++ A  LF  +      P+++TYN LID FCK+ +++   +L+  
Sbjct: 400 VLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKL 459

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + ++P  ++Y ILINGYC    + EA  L   M  K + P  ++ N++  G C+SG 
Sbjct: 460 MCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGR 519

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
            S A E    M   G   D  +YN L++ F + +++
Sbjct: 520 ISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 242/459 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ++ K      A   L +M  KGV P   T +  IN YC  G +  AF ++  +  +G
Sbjct: 90  IIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRG 149

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T  +++ GLC  G   +A +  D +   G+  D   Y TL+   C+     +A 
Sbjct: 150 YQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAF 209

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  + V P+IV ++ +I  F ++    +A   + ++   G+ PD + YT +I G+
Sbjct: 210 QLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGF 269

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G   E  ++  EM+ K    +V T+N +++  CR   + EA  +FN M++RG  PD 
Sbjct: 270 CRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDI 329

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI GHC  GN+ +A  LFD + ++ I PD+ +Y  LI G+CK   +++A  L+ +
Sbjct: 330 VTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNE 389

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + +  + + Y  LI+G C  G ++ A+ L+  +   G  P +++ N +I  +C+  D
Sbjct: 390 MRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQD 449

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E    M  +G+ P  ++YN LING+ + + + +A  L+S M+++ L PD ITYN 
Sbjct: 450 IDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNS 509

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           +  G C+ GR+ D+  +   M   G   D +TY  L++ 
Sbjct: 510 LFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDA 548



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 232/439 (52%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +++A  L N +      P V  +N++I  + K   C  A  +L +M+  G++P   T + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
            +   C    M  A  +   + +RG  P+ ++ +T++     NG++ +A+ +   + + G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           ++ D V Y  +ING C+ G  ++A ++  EM  +    ++V YN I++  C+ ++  +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           DL+ ++++ G+ PD  T+T+LI G C+ G   +   L   M  K+I P++ T+N LID F
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C+ G+M +A  ++  M+ R   P+ +++  LI+G+C  G+V EA +L+  +  +GI P +
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            S   +I GYC+     +A    ++M  + +  D + Y++LI+G  +   +  A+ L S 
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           + N G  P+VITYN+++  FC+   +     +   M  KGL P   TY  LING+     
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKR 484

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           ++EA      M  +   PD
Sbjct: 485 IREAMNLLSVMQSKNLAPD 503



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 209/362 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +   A   L EME + V P+ V YN +I+++C++    +A  L   +   G
Sbjct: 195 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 254

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TY SLI G C+ G+    K+++ EM+   ++P+  T+N L+   CRK  M EA+
Sbjct: 255 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 314

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M +RG  PDIV+F+TLI     +G +  A   F  +   G++PD   YTI+I GY
Sbjct: 315 GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGY 374

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EA+ + +EM  K  V+D+V Y+++++GLC++  ++ A +LF+ +   G  P+ 
Sbjct: 375 CKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNV 434

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   CK  +++  + LF +M  K + P ++TYN LI+G+CK   + +A  L + 
Sbjct: 435 ITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSV 494

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S+ ++P+ I+Y  L +G C  G +++A+ L+  M   G    + + N ++  +C++ D
Sbjct: 495 MQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQD 554

Query: 361 AS 362
            +
Sbjct: 555 VA 556



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 179/341 (52%)

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
           I S    +D A+  F  + +   +P  + +  II    +      A+ +  +M+ KG   
Sbjct: 58  ILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTP 117

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
            + T +  +N  C    +  A  +   +L+RG  P+  T TT++ G C +G + KA++  
Sbjct: 118 SIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFH 177

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D +  + +  D V Y TLI+G CK+G    A +L  +M  + + PN + Y ++I+ +C  
Sbjct: 178 DNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKD 237

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
               +A  L+ ++V  GI P +++  ++I+G+CR+G   +  + + +MV++ ++P+  ++
Sbjct: 238 ELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTF 297

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N LI+ F R+  M +A  + + M  +G  PD++T+N +++G C  G + ++  +   + E
Sbjct: 298 NVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFE 357

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +G+ PD  +YT LI G+     + EA    +EM  +  V D
Sbjct: 358 RGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLD 398



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 59/109 (54%)

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P  I +NT+I   V+ ++   A +L+ +M  +G+ P + T ++ +  +C  G M  +  +
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L  ++++G  P+  T TT++ G      +++A  FHD +  +G + D+ 
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEV 190


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 242/484 (50%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+   +  A+ +L  M + G  PD  T+N+LI  YCR   L+ A  L + M  +G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRG 194

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +Y +LI G C+ GR D A E+  E+ Q    PD  T+  L+   C      E  
Sbjct: 195 FSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGL 250

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G  P   +++ L+ ++ R  + + A     EM   GLVP  V  T ++N Y
Sbjct: 251 YMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAY 310

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A+++ + M  KGC  +V TYN ++ G C    + +A  L ++M E GV PD 
Sbjct: 311 CREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDV 370

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G C DG++  A  L  +M    +  D  TYN LID  CK G++++A  L+  
Sbjct: 371 VTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R I PN +++  +ING C  G    A     +MV  G  P   + +  I+  C++  
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKG 490

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + +   F+ +M+ + V P +++Y  +I+   +E N   A  +  +M + G  PDV+TY  
Sbjct: 491 SREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTT 550

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  +C +GR+H++E ++  M + G+  D   Y TLI+GH S      A      M    
Sbjct: 551 SVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVA 610

Query: 481 FVPD 484
            +P+
Sbjct: 611 SMPN 614



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 232/490 (47%), Gaps = 19/490 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C++ K + A+  L EM   G+ P  VT   ++NAYCREG +  A ++  SM  KG
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V+TYN+++ G C  G+  +A  +LD+M + G+ PD  TYN L+   C   ++  A 
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+A D  +++ LI    + G++D A   F  ++  G+ P++V +  +ING 
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A    ++M+  GC  D  TY+  +  LC+ K   E     +EML++ V P  
Sbjct: 451 CKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPST 510

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I    K+ N   A  ++  M      PD+VTY T +  +C  G + +A  +  +
Sbjct: 511 VNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVME 570

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP--------------TLV 346
           M    I  + ++Y  LI+G+ S+G    A  +   M G    P                +
Sbjct: 571 MKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRL 630

Query: 347 SCNTIIKGYCRSGDASKAD--EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + +  +K          AD  E    M    V   + +Y  ++ GF  E  +D+  +LVS
Sbjct: 631 AEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVS 690

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ- 463
            M+   L  +   Y  ++  FC+     D+  +L  MI  G  P+  +Y  L++G  ++ 
Sbjct: 691 HMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEG 750

Query: 464 --NNLKEAFR 471
             +  KE FR
Sbjct: 751 QADRAKEIFR 760



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 217/466 (46%), Gaps = 35/466 (7%)

Query: 53  MNSMSGKGLKPGVF--TYNSLINGLCKKGRCDRAKEVLDEMLQMGL-SPDTATYNTLLVE 109
           ++++S   L+P +F  T+ SL+    +         +   M   G  +P  ATYN L+  
Sbjct: 80  LHALSPPPLRP-LFDRTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRA 138

Query: 110 SCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD 169
            CR+ ++  A+     M R G  PD  +F++LI  + R  QLD A   F +M   G   D
Sbjct: 139 LCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQD 198

Query: 170 NVLYTIIINGYCRNGFVLEALK-------------------------------MRDEMLE 198
            V Y  +I G+C  G V EAL+                               M  +M E
Sbjct: 199 AVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKE 258

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G       Y  +++  CR +   EA+ + NEM + G+ P   T T +++ +C++G M+ 
Sbjct: 259 LGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSG 318

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+ +F+ M  K  +P++ TYN ++ GFC VG++ KA  L   M    + P+ ++Y +LI 
Sbjct: 319 AVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIR 378

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G C  GH+  AFRL   M G G+     + N +I   C++G   +A      +   G+ P
Sbjct: 379 GQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP 438

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +S+++NT+ING  +    D A   + KM + G  PD  TY+  +   C+     +    +
Sbjct: 439 NSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFI 498

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             M++K + P    YT +I+    + N   A R   +M+  G  PD
Sbjct: 499 DEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPD 544



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 125/299 (41%), Gaps = 16/299 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K+     A     +M   G  PD VTY T + AYC EG L EA  ++  M   G
Sbjct: 516 VIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGG 575

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY---------------NT 105
           +      YN+LI+G    G+ D A  +L  M  +   P+  T+                 
Sbjct: 576 IIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVP 635

Query: 106 LLVESCRKE-NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           L   S  K   +++  E+F  M +  V     ++  ++  FS   +LD        MK  
Sbjct: 636 LKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKED 695

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
            L  +  +YT ++N +C+     +A  +   M+  G + ++++Y  +L+G         A
Sbjct: 696 DLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRA 755

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
            ++F  +  +    D   +  +I G  + G+ +   ++  I+ Q   KP   TY  L +
Sbjct: 756 KEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTE 814



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 50/114 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN  CK      A   LC M   G  P+ ++Y  L++ +  EG  + A ++   +  K 
Sbjct: 707 LVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKE 766

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
                  +  +I+GL ++G  D   +++  + QM   P   TY  L  E   +E
Sbjct: 767 YNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELSTRE 820


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 164/545 (30%), Positives = 276/545 (50%), Gaps = 64/545 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCK+  +  A     EM  KG+ P+ VTYN L+  +C  G L+EAF L+N M  K 
Sbjct: 209 IIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN 268

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL-------------- 106
           + P V T+N+LI+ L K+G+   AK VL  M++  + PD  TYN+L              
Sbjct: 269 INPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAK 328

Query: 107 -----LVES----------------CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                + +S                C+++ + EA  +F EM  + + PDIV++++LI   
Sbjct: 329 YVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGL 388

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +N  L+RA+   ++MK  G+ PD   YTI+++  C+ G +  A +    +L KG  ++V
Sbjct: 389 CKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNV 448

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC----KDGN------ 255
            TYN ++NGLC+A +  EA DL ++M  +G  PD  TF T+I   C    KD N      
Sbjct: 449 QTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII---CALFEKDENDKAEKI 505

Query: 256 ----------------MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
                           + +A  +  +MT+  IKPD+VTY TL+DG+  V E++ A  ++ 
Sbjct: 506 LREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFY 565

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M    ++PN   Y I+I+G C    V EA  L+ EM  K + P +V+  ++I   C++ 
Sbjct: 566 SMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNH 625

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   L +M   G+ PD  SY  L++G  +   ++ A  +  ++  +G   +V  Y 
Sbjct: 626 HLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYT 685

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++   C+ G   ++  +  +M +KG  PD  T+  +I     ++   +A +   EM+ R
Sbjct: 686 AMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIAR 745

Query: 480 GFVPD 484
           G + +
Sbjct: 746 GLMKE 750



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 256/507 (50%), Gaps = 23/507 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +I  A  F  ++  +G   + V+Y TLIN  C+ G  +   +L+  + G  
Sbjct: 139 LIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHS 198

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V  YN++I+ LCK      A ++  EM+  G+SP+  TYN L+   C   ++ EA 
Sbjct: 199 VKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAF 258

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  + + PD+ +F+TLI    + G++  A +    M  A + PD V Y  +I+GY
Sbjct: 259 SLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY 318

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                V  A  +   M + G   +V TY T+++GLC+ KM+ EA  LF EM  + + PD 
Sbjct: 319 FFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDI 378

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI G CK+ ++ +A+ L   M ++ I+PD+ +Y  L+D  CK G +E A + +  
Sbjct: 379 VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQR 438

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ +    N  +Y ++ING C      EA  L  +M GKG  P  ++  TII       +
Sbjct: 439 LLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDE 498

Query: 361 ASKADEFLSKMVSEG-----------------------VDPDSISYNTLINGFVREENMD 397
             KA++ L +M++ G                       + PD ++Y TL++G+     + 
Sbjct: 499 NDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELK 558

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            A  +   M   G+ P+V  Y +++ G C++  + ++  +   M  K + P+  TYT+LI
Sbjct: 559 HAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLI 618

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +     ++L+ A     EM + G  PD
Sbjct: 619 DALCKNHHLERAIALLKEMKEHGIQPD 645



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 261/508 (51%), Gaps = 25/508 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C    I  A   L  + ++G +P+ +T NTLI   C  G +++A    + +  +G
Sbjct: 104 LMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQG 163

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +LINGLCK G       +L ++    + PD   YNT++   C+ + + +A 
Sbjct: 164 FQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDAC 223

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM  +G++P++V+++ L+  F   G L  A     EMK   + PD   +  +I+  
Sbjct: 224 DLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDAL 283

Query: 181 CRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            + G  ++A K+   ++ K C+  DVVTYN++++G      +  A  +F  M + GV P+
Sbjct: 284 GKEG-KMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPN 342

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TT+I G CK+  +++A++LF+ M  K++ PDIVTY +LIDG CK   +E+A  L  
Sbjct: 343 VRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCK 402

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  + I P+  SY IL++  C  G +  A   +  ++ KG    + + N +I G C++ 
Sbjct: 403 KMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKAD 462

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV------- 412
              +A +  SKM  +G  PD+I++ T+I     ++  DKA  ++ +M  +GL        
Sbjct: 463 LFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRL 522

Query: 413 ----------------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
                           PDV+TY  ++ G+     +  ++ + + M + G+ P+   YT +
Sbjct: 523 KEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIM 582

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           I+G   +  + EA    +EM  +   P+
Sbjct: 583 IDGLCKKKTVDEAMSLFEEMKHKNMFPN 610



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 227/422 (53%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P  F +N +++ L           +  +    G +PD  T N L+   C   +++ A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
              + +RG  P+ ++ +TLI      G++ +AL +  ++ + G   + V Y  +ING C+
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G      ++  ++       DVV YNTI++ LC+ K+L +A DL++EM+ +G+ P+  T
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +  L++G C  G++ +A +L + M  K+I PD+ T+NTLID   K G+M+ A  + A M+
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              I P+ ++Y  LI+GY  +  V  A  ++Y M   G+ P + +  T+I G C+     
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +A     +M  + + PD ++Y +LI+G  +  ++++A AL  KM+ QG+ PDV +Y ++L
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
              C+ GR+ +++    R++ KG + +  TY  +ING    +   EA     +M  +G +
Sbjct: 421 DALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCM 480

Query: 483 PD 484
           PD
Sbjct: 481 PD 482



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 238/488 (48%), Gaps = 23/488 (4%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           + E  G  PD  T N L+N +C    +  AF ++ ++  +G  P   T N+LI GLC +G
Sbjct: 88  KFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRG 147

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +A    D+++  G   +  +Y TL+   C+         +  ++    V PD+V ++
Sbjct: 148 EIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYN 207

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    +N  L  A   + EM   G+ P+ V Y  ++ G+C  G + EA  + +EM  K
Sbjct: 208 TIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLK 267

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               DV T+NT+++ L +   +  A  +   M++  + PD  T+ +LI G+     +  A
Sbjct: 268 NINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNA 327

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +F  M Q  + P++ TY T+IDG CK   +++A  L+ +M  + + P+ ++Y  LI+G
Sbjct: 328 KYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDG 387

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C   H+  A  L  +M  +GI+P + S   ++   C+ G    A EF  +++ +G   +
Sbjct: 388 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLN 447

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF-------------- 425
             +YN +ING  + +   +A  L SKME +G +PD IT+  I+                 
Sbjct: 448 VQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILR 507

Query: 426 ---------CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
                     R+ R+ +++++L  M +  + PD  TY TL++G+   N LK A      M
Sbjct: 508 EMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSM 567

Query: 477 LQRGFVPD 484
            Q G  P+
Sbjct: 568 AQMGVTPN 575



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 126/257 (49%)

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           F+ ML     P  + F  ++     + +    ++LF         PD+ T N L++ FC 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
           +  +  A  + A+++ R   PN I+   LI G C  G + +A     ++V +G +   VS
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
             T+I G C++G+       L K+    V PD + YNT+I+   + + +  A  L S+M 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G+ P+V+TYN ++ GFC  G + ++  +L  M  K +NPD  T+ TLI+    +  +K
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 468 EAFRFHDEMLQRGFVPD 484
            A      M++    PD
Sbjct: 291 AAKIVLAVMMKACIKPD 307



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 110/226 (48%)

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+  FD M      P    +N ++              L+    S   +P+  +  IL+N
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            +C + H+T AF +   ++ +G  P  ++ NT+IKG C  G+  KA  F  ++V++G   
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           + +SY TLING  +         L+ K+E   + PDV+ YN I+   C+   + D+  + 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             MI KG++P+  TY  L+ G     +LKEAF   +EM  +   PD
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPD 272


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 258/486 (53%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCK   +D A++    M    +  + VTY+ LI+++C+ G L+ A      M   G
Sbjct: 364 LINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDG 423

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  ++ YNSLING CK G    A+ +  +M+  GL P   T+ TL+   C+   + +A 
Sbjct: 424 IRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAF 483

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM+ + +AP + +F+ LI       ++  A   F EM    + P  V Y ++I GY
Sbjct: 484 KLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGY 543

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A ++ ++ML  G V D  TY  +++GLC    ++ A D  +++ ++ +  + 
Sbjct: 544 CKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNE 603

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++ L+HG+C  G + +AL+    M Q+ I  D+V +  LIDG  K  +M++   L   
Sbjct: 604 MCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKK 663

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+ + Y  +I+ Y   G   ++      MV +   P +V+    + G C+ G+
Sbjct: 664 MYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGE 723

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     KM++  + P+S++Y   ++   +E NM +A  L  +M  +GL+ +  TYN+
Sbjct: 724 IDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNI 782

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+ GR+ ++  +L  M E G+ PD  TY+T+I  H    ++  A    D ML++G
Sbjct: 783 LIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKG 842

Query: 481 FVPDDA 486
             PD  
Sbjct: 843 VEPDSV 848



 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 263/521 (50%), Gaps = 35/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+      AK  +  ME        VTYN LI+  C+ G + EA ++  S+  KG
Sbjct: 224 VIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKG 283

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK  V TY +L+ G C+  + D    +++EM+++G  P  A  + L+    +K N+  A 
Sbjct: 284 LKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAY 343

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  ++ R G  P++  ++ LI    +   LD+A + ++ M S  L  ++V Y+I+I+ +
Sbjct: 344 DLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSF 403

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A      M+E G    +  YN+++NG C+   L+ A+ L+ +M+  G+ P  
Sbjct: 404 CKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTA 463

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFTTLI G+CKD  + KA  L+  M +K I P + T+  LI G C   EM +A+KL+ +
Sbjct: 464 TTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDE 523

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ RKI P  ++Y ++I GYC   ++ +AF L  +M+  G+ P   +   +I G C +G 
Sbjct: 524 MVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGR 583

Query: 361 ASKADEFLS-----------------------------------KMVSEGVDPDSISYNT 385
            S A +F+                                    +M+  G++ D + +  
Sbjct: 584 VSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAV 643

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G +++++M + F L+ KM +QGL PD + Y  ++  + ++G    S   L  M+ + 
Sbjct: 644 LIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEK 703

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             P+  TYT  +NG      +  A    ++ML     P+  
Sbjct: 704 CFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSV 744



 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 244/486 (50%), Gaps = 1/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+  + D     + EM + G  P     + L++   ++G ++ A+ L+  +   G
Sbjct: 294 LVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFG 353

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +F YN+LIN LCK    D+A+ +   M  M L  +  TY+ L+   C++  +  AE
Sbjct: 354 FLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAE 413

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M   G+   I  +++LI    + G L  A   + +M + GL P    +T +I+GY
Sbjct: 414 SYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGY 473

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  V +A K+  EM EK     V T+  ++ GLC    + EA  LF+EM+ER + P  
Sbjct: 474 CKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTE 533

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I G+CK  NM+KA  L + M    + PD  TY  LI G C  G +  A     D
Sbjct: 534 VTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDD 593

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + +  N + Y  L++GYC  G +TEA     EM+ +GI   LV    +I G  +  D
Sbjct: 594 LHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQD 653

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +    L KM  +G+ PDS+ Y ++I+ + +E +  K+   +  M  +   P+V+TY  
Sbjct: 654 MKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTA 713

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            + G C+ G +  +  +  +M+   ++P+  TY   ++    + N+KEA   H EML +G
Sbjct: 714 FMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KG 772

Query: 481 FVPDDA 486
            + + A
Sbjct: 773 LLANTA 778



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 252/483 (52%), Gaps = 44/483 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK   + +A+    +M  +G+ P   T+ TLI+ YC++  +E+AF+L   M+ K 
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+T+ +LI GLC       A ++ DEM++  + P   TYN ++   C+  NM +A 
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAF 553

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M   G+ PD  ++  LI      G++  A  +  ++    L  + + Y+ +++GY
Sbjct: 554 ELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGY 613

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EAL    EM+++G  MD+V +  +++G  + + +     L  +M ++G+ PD 
Sbjct: 614 CGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDS 673

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T++I  + K+G+  K+    D+M  +   P++VTY   ++G CKVGE+++A  L+  
Sbjct: 674 VIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEK 733

Query: 301 MISRKISPNYISYG----------------------------------ILINGYCSMGHV 326
           M++  ISPN ++YG                                  ILI G+C +G +
Sbjct: 734 MLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRL 793

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA ++  EM   GI P  ++ +TII  +CRSGD   A E    M+ +GV+PDS+++N L
Sbjct: 794 IEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLL 853

Query: 387 INGFVREENMDKAFALVSKMENQGLVP---------DVITYNVILTGFCRQGRMHDSELI 437
           I G      +DKAF L + M ++GL P         D+   N ++ G C  G + D+ L 
Sbjct: 854 IYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEV-DTALR 912

Query: 438 LWR 440
           L+ 
Sbjct: 913 LYH 915



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 251/484 (51%), Gaps = 3/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++ CK   +D A+ +   M + G+      YN+LIN +C+ G L  A  L   M  +G
Sbjct: 399 LIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P   T+ +LI+G CK  + ++A ++  EM +  ++P   T+  L+   C    M+EA 
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  R + P  V+++ +I  + +   +D+A     +M   GLVPD   Y  +I+G 
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V  A    D++ +K   ++ + Y+ +L+G C    LTEA     EM++RG+  D 
Sbjct: 579 CSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDL 638

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                LI G  K  +M +   L   M  + ++PD V Y ++ID + K G  +K+ +    
Sbjct: 639 VCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDL 698

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++ K  PN ++Y   +NG C +G +  A  L+ +M+   I P  V+    +    + G+
Sbjct: 699 MVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGN 758

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +   +M+ +G+  ++ +YN LI GF +   + +A  ++S+M   G+ PD ITY+ 
Sbjct: 759 MKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYST 817

Query: 421 ILTGFCRQGRMHDSELILW-RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           I+   CR G +  + + LW  M+ KG+ PD   +  LI G      L +AF   ++ML R
Sbjct: 818 IIYEHCRSGDV-GAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSR 876

Query: 480 GFVP 483
           G  P
Sbjct: 877 GLKP 880



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 248/484 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V++  ++ ++  A + L  M    + P+  T + ++N   R       +++ +     G
Sbjct: 154 LVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAG 213

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP  +T +++I  LC+     RAKE +  M          TYN L+   C+   + EA 
Sbjct: 214 VKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEAL 273

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   +  +G+  D+V++ TL+  F R  Q D  +    EM   G VP     + +++G 
Sbjct: 274 EVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGL 333

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +  A  +  ++   G + ++  YN ++N LC+ + L +A+ L+  M    +  + 
Sbjct: 334 RKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLND 393

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ LI   CK G ++ A + F  M +  I+  I  YN+LI+G CK G++  A  L+  
Sbjct: 394 VTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTK 453

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI+  + P   ++  LI+GYC    V +AF+L+ EM  K I P++ +   +I G C + +
Sbjct: 454 MINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNE 513

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +   +MV   + P  ++YN +I G+ +  NMDKAF L+  M + GLVPD  TY  
Sbjct: 514 MAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRP 573

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G C  GR+  ++  +  + +K L  +   Y+ L++G+  Q  L EA     EM+QRG
Sbjct: 574 LISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRG 633

Query: 481 FVPD 484
              D
Sbjct: 634 INMD 637



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 212/420 (50%), Gaps = 45/420 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC  +++  A     EM ++ + P  VTYN +I  YC+   +++AF+L+  M   G
Sbjct: 504 LIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNG 563

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +TY  LI+GLC  GR   AK+ +D++ +  L  +   Y+ LL   C +  ++EA 
Sbjct: 564 LVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
              CEM +RG+  D+V  + LI    +   + R     ++M   GL PD+V+YT +I+ Y
Sbjct: 624 SASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAY 683

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA-----------KMLT------- 222
            + G   ++ +  D M+ + C  +VVTY   +NGLC+            KMLT       
Sbjct: 684 SKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNS 743

Query: 223 -----------------EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                            EA DL +EML +G+  +  T+  LI G CK G + +A  +   
Sbjct: 744 VTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSE 802

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           MT+  I PD +TY+T+I   C+ G++  A +LW  M+ + + P+ +++ +LI G C  G 
Sbjct: 803 MTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGA 862

Query: 326 VTEAFRLWYEMVGKGIKPT---------LVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + +AF L  +M+ +G+KP          L  CN ++ G C +G+   A      M++  V
Sbjct: 863 LDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAV 922



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 198/389 (50%), Gaps = 45/389 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   CK H +D A   L +M   G+ PDT TY  LI+  C  G +  A   ++ +  K 
Sbjct: 539 MIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKN 598

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LK     Y++L++G C +GR   A     EM+Q G++ D   +  L+  + ++++M    
Sbjct: 599 LKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLF 658

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNG------------------------------- 149
            +  +M  +G+ PD V ++++I  +S+ G                               
Sbjct: 659 GLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGL 718

Query: 150 ----QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
               ++DRA   F +M +A + P++V Y   ++   + G + EA  +  EML KG + + 
Sbjct: 719 CKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANT 777

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYN ++ G C+   L EA  + +EM E G+FPD  T++T+I+ HC+ G++  A+ L+D 
Sbjct: 778 ATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDT 837

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI------SYGI---L 316
           M +K ++PD V +N LI G C  G ++KA +L  DM+SR + P  I        G+   L
Sbjct: 838 MLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFL 897

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           ++G C  G V  A RL++ M+ + +K +L
Sbjct: 898 MHGGCVTGEVDTALRLYHSMLTRAVKLSL 926



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 153/281 (54%), Gaps = 12/281 (4%)

Query: 12  DSAKMF--LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           D  ++F  L +M  +G+ PD+V Y ++I+AY +EG  +++ + ++ M  +   P V TY 
Sbjct: 653 DMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYT 712

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           + +NGLCK G  DRA  + ++ML   +SP++ TY   L    ++ NM EA ++  EM  +
Sbjct: 713 AFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM-LK 771

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G+  +  +++ LI  F + G+L  A     EM   G+ PD + Y+ II  +CR+G V  A
Sbjct: 772 GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP---------DF 240
           +++ D ML KG   D V +N ++ G C    L +A +L N+ML RG+ P         D 
Sbjct: 832 VELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDL 891

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
                L+HG C  G ++ AL L+  M  +++K  +  +  L
Sbjct: 892 GVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCL 932



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 154/311 (49%)

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           +  +++ Y +N  V +A+ +   ML    + +V T + ILNGL R +      ++F+E +
Sbjct: 151 FDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESV 210

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
             GV PD YT + +I   C+  +  +A      M        IVTYN LI G CK G + 
Sbjct: 211 NAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVL 270

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           +A ++   +  + +  + ++Y  L+ G+C +    +   L  EMV  G  PT  + + ++
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G  + G+   A + + K+   G  P+   YN LIN   + E++DKA  L   M +  L 
Sbjct: 331 DGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLP 390

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            + +TY++++  FC++G +  +E    RMIE G+      Y +LINGH    +L  A   
Sbjct: 391 LNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFL 450

Query: 473 HDEMLQRGFVP 483
           + +M+  G  P
Sbjct: 451 YTKMINEGLEP 461



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 18/246 (7%)

Query: 259 ALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI------ 311
           AL  F+ +   K++     ++  L+    +      AN L   ++ R   P ++      
Sbjct: 79  ALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLE 138

Query: 312 -----------SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
                       +  L++ Y     V +A  +   M+G  + P + + + I+ G  R   
Sbjct: 139 SHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRK 198

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E   + V+ GV PD  + + +I      ++  +A   +  ME+      ++TYNV
Sbjct: 199 FILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNV 258

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G + ++  +   + EKGL  D  TY TL+ G        +     +EM++ G
Sbjct: 259 LIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELG 318

Query: 481 FVPDDA 486
           FVP +A
Sbjct: 319 FVPTEA 324


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 157/516 (30%), Positives = 248/516 (48%), Gaps = 36/516 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC   +I  A   L +M ++G  P    Y+  + A CR      A  ++  + G+G
Sbjct: 117 LVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSEA 119
               V   N ++  +C +G  D A  +L ++L   G  PD  +YN +L   C        
Sbjct: 177 CALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHV 236

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +++  EM   G  P+IV+FSTLIG   RNG  +R      +M   G  PD  +Y  II+G
Sbjct: 237 QDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDG 296

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+   +  A  + + M   G   +VV YNT+L GLC A    EA+ L  EM ++    D
Sbjct: 297 VCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLD 356

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF  L+   C++G +++ + + + M +    PD++TY T+I+GFCK G +++A  L  
Sbjct: 357 DVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLR 416

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M +    PN +SY I++ G CS     +A  L  +M+ +G  P  V+ NT+I   C+ G
Sbjct: 417 SMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 476

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP------ 413
              +A E L +M+  G  PD ISY+T+I+G  +  N D+A  L++ M  +G+ P      
Sbjct: 477 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYS 536

Query: 414 -----------------------------DVITYNVILTGFCRQGRMHDSELILWRMIEK 444
                                        D + YN +++  C++G    +   L  M+  
Sbjct: 537 SIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSS 596

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           G  P+ STYT LI G  S+  +KEA     E+  +G
Sbjct: 597 GCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 232/456 (50%), Gaps = 10/456 (2%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN ++  YCR G L  A +L  S+    + P  +TY  L+  LC +GR   A  VLD+M 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           + G +P    Y+  L  +CR      A  +  ++  RG A D+ + + ++      G +D
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 153 RALMYFRE-MKSAGLVPDNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCVMDVVTY 208
            A+   R+ + S G  PD V Y  ++ G C   R G V +   + +EM+  GC  ++VT+
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQD---LMEEMVAAGCPPNIVTF 255

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           +T++  LCR  +     ++  +M E G  PD   + T+I G CK+  +  A  + + M  
Sbjct: 256 STLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPS 315

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + P++V YNTL+ G C     E+A  L A+M  +    + +++ IL++  C  G V  
Sbjct: 316 YGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDR 375

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
              +  +M+  G  P +++  T+I G+C+ G   +A   L  M + G  P+++SY  ++ 
Sbjct: 376 VIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLK 435

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G    E    A  L+S+M  QG  P+ +T+N ++   C++G +  +  +L +M+  G +P
Sbjct: 436 GLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 495

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D  +Y+T+I+G     N  EA    + M+++G  P+
Sbjct: 496 DLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPN 531


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 155/519 (29%), Positives = 261/519 (50%), Gaps = 36/519 (6%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +NA CK  KID A     +M + GV P+ VTYN LI+  C+ G LEEA      M    +
Sbjct: 248 INAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKV 307

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P + TY  L+NGL K  + D A  VL EM   G SP+   +N L+    RK NM +A  
Sbjct: 308 NPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALR 367

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQL------------------------------ 151
           +  +M+ +G+ P+ V+ +TL+  F R  Q+                              
Sbjct: 368 VRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLC 427

Query: 152 -----DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK-GCVMDV 205
                D AL   + +    +  ++ L T+++ G C+ G  LEA+ +   + +K G   + 
Sbjct: 428 KSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANT 487

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T N +L GLC    + E   +  EM+ERG+  D  ++ TLI G CK G + +A  L + 
Sbjct: 488 TTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEK 547

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++  KPD  TYN L+ G    G+M+   ++  +     + PN  +Y +++ GYC+   
Sbjct: 548 MMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADR 607

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  L+ ++V   ++ + V  N +I  + ++G+ ++A +    M S  + P   +Y++
Sbjct: 608 IDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSS 667

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I+G    + +++A  +  +M N+GL+P+V  Y  ++ G+C+ G+M   E IL  M    
Sbjct: 668 IIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNC 727

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + P++ TYT +I+G+    N KEA +  +EM+  G  PD
Sbjct: 728 IQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPD 766



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 235/462 (50%), Gaps = 1/462 (0%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
            KGV+P   + N L+++  +   L ++F++ ++M   G+   V+TY + IN  CK G+ D
Sbjct: 199 SKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKID 258

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A  +  +M + G+ P+  TYN L+   C+   + EA      M    V P +V++  L+
Sbjct: 259 EAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILV 318

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               +  + D A     EM S G  P+  ++  +I+GY R G + +AL++RD+M  KG  
Sbjct: 319 NGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLK 378

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            + VT+NT+L G CR   + +A+ +   +L   +  +    + ++H  CK    + AL +
Sbjct: 379 PNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKI 438

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISYGILINGYC 321
              +  ++IK +      L+ G CK G+  +A  LW  +  +K ++ N  +   L+ G C
Sbjct: 439 VKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLC 498

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G++ E F +  EMV +G+    +S NT+I G C+SG   +A +   KM+ +G  PD+ 
Sbjct: 499 ERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTY 558

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +YN L+ G   +  MD    ++ + ++ G+VP++ TY ++L G+C   R+ ++  +  ++
Sbjct: 559 TYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKL 618

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +   +      Y  LI  H    N  EAF+  D M      P
Sbjct: 619 VYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHP 660



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 203/390 (52%), Gaps = 8/390 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-GK 59
           +++ LCK  K DSA   +  +  + +  +      L+   C+ G   EA  L   ++  K
Sbjct: 422 VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKK 481

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL     T N+L+ GLC++G  +    V  EM++ GL  D  +YNTL+   C+   + EA
Sbjct: 482 GLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEA 541

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  +M ++G  PD  +++ L+   +  G++D       E K  G+VP+   Y +++ G
Sbjct: 542 FKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEG 601

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC    +  A+ + ++++     +  V YN ++    +A   TEA  L + M    + P 
Sbjct: 602 YCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPT 661

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T++++IHG C +  + +A  +F+ M  + + P++  Y  LI G+CK+G+M++   +  
Sbjct: 662 IFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQ 721

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M S  I PN I+Y I+I+GYC MG+  EA +L  EM+  GI P  V+   + KGYC   
Sbjct: 722 EMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYC--- 778

Query: 360 DASKADEFLSKMVSEGVDP-DSISYNTLIN 388
              K +E    +  +   P + I+Y TL++
Sbjct: 779 ---KENELEETLQGDTAVPLEEITYTTLVD 805



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 209/458 (45%), Gaps = 50/458 (10%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V +Y  LI  L       RAK  L  +++          NT L ++     +SE    F 
Sbjct: 111 VRSYCILIRLLLASNHIPRAKFTLKRLIE-------GNANTPLKKT--DARLSEIASAFL 161

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           E+  R      +    L   F   G    A   F    S G+ P       +++   ++ 
Sbjct: 162 ELGERSHGELDLLIYILCSQFQHLG-FHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSN 220

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + ++ ++ D M   G ++DV TY T +N  C+   + EA  LF +M E GV P+  T+ 
Sbjct: 221 ELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYN 280

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI G CK G + +AL     M +  + P +VTY  L++G  K  + ++AN +  +M S+
Sbjct: 281 NLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSK 340

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
             SPN   +  LI+GY   G++ +A R+  +M  KG+KP  V+ NT+++G+CR+    +A
Sbjct: 341 GFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQA 400

Query: 365 DEFLSKMVSE--GVDPDSISYNTLINGFVREENMDKAFALVSKM---------------- 406
           ++ L  ++S    V+ D+ SY  +++   +    D A  +V  +                
Sbjct: 401 EQVLEYLLSNVLSVNEDACSY--VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLV 458

Query: 407 --------------------ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
                               + +GL  +  T N +L G C +G M +   +   M+E+GL
Sbjct: 459 CGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGL 518

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             D  +Y TLI G      ++EAF+  ++M+++GF PD
Sbjct: 519 VLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPD 556



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 133/264 (50%)

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A D F     +GVFP   +   L+    K   ++K+  +FD M +  +  D+ TY T I+
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
            +CK G++++A  L+  M    + PN ++Y  LI+G C  G + EA      MV   + P
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
           +LV+   ++ G  +     +A+  L +M S+G  P+   +N LI+G+ R+ NMD A  + 
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
             M  +GL P+ +T+N +L GFCR  +M  +E +L  ++   L+ +    + +++     
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS 429

Query: 464 NNLKEAFRFHDEMLQRGFVPDDAF 487
           +    A +    +L R    +D+ 
Sbjct: 430 SKFDSALKIVKALLLRNIKVNDSL 453


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 150/483 (31%), Positives = 241/483 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNA  K   I  A +++ ++ Q G+ PD+ TY +LI  YCR   +  A+++ N M  KG
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y ++I+GLC+ GR D    +  +M +    P   TY  ++      +   E  
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  R   P++ +++ ++    +  +LD +     EM   GLVP  V Y  +I GY
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  AL++   M    C  +  TYN ++ G  + K + +A  L ++MLE  + P  
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LIH  CK G+ + A  L D++ +  + PD  TY+  ID  CK   ME+A  L+  
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS 519

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + I  N + Y  LI+G+C  G + EA  L   M  +   P   + N++I G C+ G 
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGK 579

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +    +  M   GV P   +Y  LI   +RE + D A  + ++M + G  PDV TY  
Sbjct: 580 VQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTA 639

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  +C  G + ++E ++ RMIE G+ PD  TYT LI+ +       +AF     ML  G
Sbjct: 640 FIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAG 699

Query: 481 FVP 483
             P
Sbjct: 700 CDP 702



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 245/488 (50%), Gaps = 35/488 (7%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           +YN L+    R   ++E  ++   M    + P ++T N+++N   K G    A   + ++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
            Q GLSPD+ TY +L++  CR  +++ A ++F  M  +G   + VS++T+I      G++
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D  +  F++M+     P    YT+II+    N   LE + + +EM E+ C  +V TY  +
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++ +C+ + L E+  + NEM+E+G+ P   T+  LI G+C++G +  AL +  +M   + 
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           +P+  TYN LI GF K   + KA  L + M+  K++P+ ++Y  LI+  C  GH   A++
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480

Query: 332 L-------------WYEMV----------------------GKGIKPTLVSCNTIIKGYC 356
           L             W   V                       KGIK   V    +I G+C
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC 540

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           ++G   +A   L +M SE   P+S +YN+LI G  +E  + +  ++V  M   G+ P V 
Sbjct: 541 KAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVA 600

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY +++    R+G    +  +  +M+  G  PD  TYT  I+ + +  N+KEA      M
Sbjct: 601 TYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARM 660

Query: 477 LQRGFVPD 484
           ++ G +PD
Sbjct: 661 IEAGVMPD 668



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 207/385 (53%)

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           +YN LL+   R   + E + ++ EM    + P+I + +T++  +S+ G +  A +Y  ++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
             AGL PD+  YT +I GYCRN  V  A K+ + M  KGC  + V+Y TI++GLC A  +
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
            E   LF +M E   +P   T+T +IH    +    + ++LF+ M ++S +P++ TY  +
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           +D  CK  +++++ ++  +M+ + + P+ ++Y  LI GYC  G +  A  +   M     
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
           +P   + N +I G+ +     KA   LSKM+   + P  ++YN+LI+   +  + D A+ 
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           L+  ++  GLVPD  TY+V +   C+  RM ++  +   + EKG+  +   YT LI+GH 
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC 540

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDDA 486
               + EA    + M     +P+ +
Sbjct: 541 KAGKIDEAISLLERMHSEDCLPNSS 565



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 220/426 (51%)

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  V +YN L+  L +    D  K V  EML   + P+  T NT++    +  N+ EA 
Sbjct: 175 FKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEAN 234

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               ++ + G++PD  ++++LI  + RN  ++ A   F  M + G   + V YT II+G 
Sbjct: 235 LYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGL 294

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + E + +  +M E  C   V TY  I++ L       E  DLFNEM ER   P+ 
Sbjct: 295 CEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNV 354

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+T ++   CK+  ++++  + + M +K + P +VTYN LI G+C+ G +E A ++   
Sbjct: 355 HTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGL 414

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    PN  +Y  LI G+    HV +A  L  +M+   + P+LV+ N++I   C++G 
Sbjct: 415 MESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH 474

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A + L  +   G+ PD  +Y+  I+   + + M++A  L + ++ +G+  + + Y  
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTA 534

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C+ G++ ++  +L RM  +   P+ STY +LI G   +  ++E     + M + G
Sbjct: 535 LIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG 594

Query: 481 FVPDDA 486
             P  A
Sbjct: 595 VKPTVA 600


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 262/478 (54%), Gaps = 3/478 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K D A   L   ++KG  P  + YN ++    R+G +EEA ++ + M  +   P + TYN
Sbjct: 358 KFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYN 416

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI+ LCK G  + A +V D M + GL P+  T N ++   C+ + + EA  IF  +  +
Sbjct: 417 ILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK 476

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
             +PD  +F +LI    R G++D A   + +M  +  +P+ V+YT +I  + + G   + 
Sbjct: 477 VCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDG 536

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            K+  EM+ +GC  D++  N+ ++ + +A  + +   LF E+  +G+ PD  +++ LIHG
Sbjct: 537 HKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
             K G   +   LF  M ++ +  D++ YNT+IDGFCK G+++KA +L  +M ++ + P 
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++YG +++G   +  + EA+ L+ E    G+   +V  +++I G+ + G   +A   L 
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILE 716

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +++ +G+ P+S ++N L++  V+ E +D+A      M+N    P+ +TY++++ G C   
Sbjct: 717 ELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLC-MI 775

Query: 430 RMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           R  +   + W+ ++K GL P+  TYTT+I G     N+ EA    D     G VPD A
Sbjct: 776 RKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSA 833



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 248/469 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++++A      M++ G++P+ +T N +I+  C+   L+EA  +   +  K 
Sbjct: 418 LIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV 477

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+ SLI+GL ++GR D A  + ++ML     P+   Y +L+    +     +  
Sbjct: 478 CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGH 537

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ EM  RG +PD++  ++ +    + G++++    F E+K+ GLVPD   Y+I+I+G 
Sbjct: 538 KIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF  E  K+  EM E+G  +DV+ YNT+++G C++  + +A  L  EM  +G+ P  
Sbjct: 598 VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV 657

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++ G  K   +++A  LF+      +  ++V Y++LIDGF KVG +++A  +  +
Sbjct: 658 VTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEE 717

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + ++PN  ++  L++       + EA   +  M      P  ++ + +I G C    
Sbjct: 718 LMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRK 777

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M  +G+ P++I+Y T+I G  +  N+ +A  L  + +  G VPD   YN 
Sbjct: 778 FNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNA 837

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++ G     +  D+ ++      KG   +  T   L++     + L++A
Sbjct: 838 MIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 237/483 (49%), Gaps = 1/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V +  K HK+  A   +  M +    P    Y TLI A       +    L + M   G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  V  + +L+    ++GR D A  +LDEM     + D   YN  +    +   +  A 
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F EM  +G+ PD V+++TLIG+  +  +LD A+  F E+     VP    Y  +I GY
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G   EA  + +    KGC+  V+ YN IL  L R   + EA  + +EM +    P+ 
Sbjct: 354 GSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-PNL 412

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI   CK G +  AL + D M +  + P+I+T N +ID  CK  ++++A  ++  
Sbjct: 413 TTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLG 472

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  SP+  ++  LI+G    G V +A+ L+ +M+     P +V   ++I+ + + G 
Sbjct: 473 LDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGR 532

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                +   +MV  G  PD +  N+ ++   +   ++K  AL  +++ QGLVPDV +Y++
Sbjct: 533 KEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSI 592

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + G   ++  + + M E+GL+ D   Y T+I+G      + +A++  +EM  +G
Sbjct: 593 LIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG 652

Query: 481 FVP 483
             P
Sbjct: 653 LQP 655



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 198/418 (47%), Gaps = 1/418 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            YN+ +  + +    D  +++L+EM   G          L+    +   + EA  +   M
Sbjct: 135 VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM 194

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            +    P   +++TLIG  S   + D  L  F +M+  G   +  L+T ++  + R G +
Sbjct: 195 RKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRI 254

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL + DEM       D+V YN  ++   +   +  A   F+EM  +G+ PD  T+TTL
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTL 314

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I   CK   +++A+ LF+ +      P +  YNT+I G+   G+ ++A  L      +  
Sbjct: 315 IGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGC 374

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I+Y  ++      G V EA R+  EM  +   P L + N +I   C++G+   A +
Sbjct: 375 IPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALK 433

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M   G+ P+ ++ N +I+   + + +D+A ++   ++++   PD  T+  ++ G  
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG 493

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           R+GR+ D+  +  +M++    P+   YT+LI         ++  + + EM+ RG  PD
Sbjct: 494 RRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPD 551



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 53/135 (39%)

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++  + +S    +A   +  M      P   +Y TLI         D    L  +M+  G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
              +V  +  ++  F R+GR+  +  +L  M       D   Y   I+       +  A+
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293

Query: 471 RFHDEMLQRGFVPDD 485
           +F  EM  +G VPDD
Sbjct: 294 KFFHEMKAQGLVPDD 308


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 230/413 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+   +D     L ++ + G+ P+ +T++TLIN +C EG +  A +L + M  +G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V +Y+ +I GLC+ G+     ++L+ M  +G  PD   YNT++   C+   ++EA 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IFC+M   G+ P +V++++LI      G+   A     EMK   ++PD V ++++I+  
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA  +   M E G   DV TYNT++NG C    + EA  +F  M+ +G  PD 
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++F+ L++G+CK   +++A  LFD MT + + PD V+YNTLI G C+     +A +L+ D
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    PN ++Y IL++     G++ +A  L+  M   G+KP LV+ N +I G C+ G 
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
              A E  +++  +G+ P++      I+G  +   +D+A     +ME     P
Sbjct: 492 FKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 238/449 (53%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  L +A  R    +    L   M   G+   V +   LIN  C+    D    V
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L +++++GL P+  T++TL+   C +  +  A E+F  M  RG  P++ S+S +I    R
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCR 208

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+    +     MK  G  PD V+Y  I++  C++  V EA+ +  +M   G +  VVT
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVT 268

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y ++++GL       EA  L NEM    + PD   F+ LI   CK+G +++A  +   MT
Sbjct: 269 YTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMT 328

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  ++PD+ TYNTL++G+C   E+ +A K++  MIS+   P+  S+ IL+NGYC    + 
Sbjct: 329 EMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRID 388

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA +L+ EM  +G+ P  VS NT+I G C++    +A+E    M S G  P+ ++Y+ L+
Sbjct: 389 EAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILL 448

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   ++  +D+A  L   MEN GL PD++TYN+++ G C+ G+  D+  +   +  KGL 
Sbjct: 449 DCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQ 508

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           P+    T  I+G      L EA +   +M
Sbjct: 509 PNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 229/441 (51%), Gaps = 2/441 (0%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           + +A    N M      P +  +  L + L +         +  +M   G+S D  +   
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   CR  ++     +  ++ + G+ P++++FSTLI  F   G++ RA+  F  M + G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+   Y+III G CR G   E +K+ + M   GC  DVV YNTI++ LC+ +++ EA 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            +F +M   G+ P   T+T+LIHG    G   +A  L + M   +I PD+V ++ LID  
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK GE+ +A  +   M    + P+  +Y  L+NGYC    V EA +++  M+ KG  P +
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            S + ++ GYC++    +A +   +M   G+ PD++SYNTLI+G  +     +A  L   
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQN 464
           M + G  P+++TY+++L    +QG + D  + L+R +E  GL PD  TY  +I+G     
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYL-DQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYG 490

Query: 465 NLKEAFRFHDEMLQRGFVPDD 485
             K+A     E+  +G  P++
Sbjct: 491 KFKDARELFAELSVKGLQPNN 511



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 195/371 (52%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
            N+++A   F  M      P IV F  L     R       +   ++M+ AG+  D +  
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
           TI+IN +CR   V     +  ++++ G   +V+T++T++NG C    +  A +LF+ M+ 
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           RG  P+ ++++ +I G C+ G   + + L + M     +PD+V YNT++D  CK   + +
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  ++  M    I P  ++Y  LI+G  ++G   EAF L  EM G  I P LV+ + +I 
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C+ G+ S+A   L  M   GV+PD  +YNTL+NG+     + +A  +   M ++G +P
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMP 369

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           DV ++++++ G+C+  R+ +++ +   M  +GL PD  +Y TLI+G        EA    
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELF 429

Query: 474 DEMLQRGFVPD 484
            +M   G+ P+
Sbjct: 430 KDMHSNGYPPN 440



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K   +D A      ME  G+ PD VTYN +I+  C+ G  ++A +L   +S KG
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
           L+P  +     I+G+CK G  D A +   +M +   SP     N
Sbjct: 507 LQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 155/483 (32%), Positives = 256/483 (53%), Gaps = 1/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  K D A+   C + +    P+ +TY  +I+ YC+ G ++ A  L+  M  K 
Sbjct: 267 LIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQ 326

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY+S+ING  KKG  D A  ++ +ML   + P+   Y TL+    +      A 
Sbjct: 327 VVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAV 386

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM   G+  +       I    R  +++ A    + M S GL+ D V YT +++G+
Sbjct: 387 DLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGF 446

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A  M ++M E G   DVV YN ++NGL R     +A+ +++ + E G+ PD 
Sbjct: 447 FKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELGLAPDR 505

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I+ +CK G +  A+ L++ M   S+ P+ +T N L+ G  K GE E+A  +  +
Sbjct: 506 ATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNE 565

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   I PN   +  L+N            ++   +VG G+K      N++I   C  G 
Sbjct: 566 MLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGM 625

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L+ M  EG+  D+++YN LI+G  +  +++KA A  ++M N+G+ P + TYN+
Sbjct: 626 TKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNL 685

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G    G M  +  IL +M + GL+PD S Y TLI+GH    N KEA +F+ EM+ +G
Sbjct: 686 LLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKG 745

Query: 481 FVP 483
            VP
Sbjct: 746 LVP 748



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 246/464 (53%), Gaps = 9/464 (1%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           DTVTYNT I  +C++G   + F  ++ M  K      FT N L+ G C+ G     + V+
Sbjct: 77  DTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVM 136

Query: 89  DEMLQ--------MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
           D ++           L P+  TY TL+   C++  +SEA  ++ EM   G  PD+V++S+
Sbjct: 137 DNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSS 196

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I    + G L  A    REM   G+ P++V+Y I+++   + G   E+   + +M+  G
Sbjct: 197 IINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCG 256

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D+V   T+++GL +A    EA+ +F  + +    P+  T+T +I G+CK G+M+ A 
Sbjct: 257 VSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAE 316

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +L   M +K + P++VTY+++I+G+ K G ++ A ++   M+ + I PN   Y  LI+G+
Sbjct: 317 SLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGH 376

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G    A  L+ EM   G++      +  I    R     +A+     M+S+G+  D 
Sbjct: 377 LKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDR 436

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++Y +L++GF +      AF +  KM   G+  DV+ YNV++ G  R G+ +D+E +   
Sbjct: 437 VNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGK-YDAESVYSG 495

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + E GL PDR+TY T+IN +  Q  L+ A +  +EM     +P+
Sbjct: 496 IRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPN 539



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 157/530 (29%), Positives = 259/530 (48%), Gaps = 48/530 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++  CK   +D A+  L +ME+K V P+ VTY+++IN Y ++G L+ A ++M  M  + 
Sbjct: 302 MIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQN 361

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  + Y +LI+G  K G+ D A ++ +EM   GL  ++   +  +    R   M EAE
Sbjct: 362 IMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAE 421

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G+  D V++++L+  F + G+   A     +M   G+  D V Y ++ING 
Sbjct: 422 GLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGL 481

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A  +   + E G   D  TYNT++N  C+   L  A  L+NEM    V P+ 
Sbjct: 482 LRLG-KYDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNS 540

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV------------------------ 276
            T   L+ G  K G   +A+++ + M    I P++                         
Sbjct: 541 ITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKR 600

Query: 277 -----------TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                       YN+LI   C +G  ++A  +  +M    IS + ++Y  LI+G+    H
Sbjct: 601 LVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSH 660

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + +A   + +M+ +G+ P + + N ++ G   +G  SKA E LSKM   G+DPD+  YNT
Sbjct: 661 IEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNT 720

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  +  N  +A     +M  +GLVP   TYNV++  F + G+M  +  +L  M  + 
Sbjct: 721 LISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRR 780

Query: 446 LNPDRSTYTTLING-----------HVSQNNLK-EAFRFHDEMLQRGFVP 483
           + P+ STY  LI G            +S+   + EA     EM ++GFVP
Sbjct: 781 VPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVP 830



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 234/455 (51%), Gaps = 13/455 (2%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N L +  K++ A+     M  KG+  D V Y +L++ + + G    AF +   M+  G+
Sbjct: 408 INNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGI 467

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           K  V  YN LINGL + G+ D A+ V   + ++GL+PD ATYNT++   C++  +  A +
Sbjct: 468 KFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIK 526

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           ++ EM    V P+ ++ + L+G  S+ G+ +RA+    EM   G+ P+  ++  ++N   
Sbjct: 527 LWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACS 586

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           +       L+M   ++  G   +   YN+++  LC   M   A  + N M + G+  D  
Sbjct: 587 KCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTV 646

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  LIHGH K  ++ KAL  +  M  + + P I TYN L+ G    G M KA ++ + M
Sbjct: 647 TYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKM 706

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
               + P+   Y  LI+G+  +G+  EA + + EMV KG+ P   + N +I+ + + G  
Sbjct: 707 KDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKM 766

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFV---REENMDK---------AFALVSKMENQ 409
            +A E L++M    V P+S +Y+ LI G+    ++  +D+         A  L ++M  +
Sbjct: 767 DQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEK 826

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           G VP   T   I + F R G + D++ +L  M ++
Sbjct: 827 GFVPCENTLACISSTFARPGMVVDAKHMLKDMYKR 861



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 202/387 (52%), Gaps = 21/387 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K D+  ++   + + G+ PD  TYNT+INAYC++G LE A +L N M G  
Sbjct: 477 LINGLLRLGKYDAESVY-SGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHS 535

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T N L+ GL K G  +RA +VL+EML  G+ P+   +  LL  +C K    E  
Sbjct: 536 VMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALL-NACSK---CERA 591

Query: 121 EIFCEMSRR----GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
           +   +M +R    G+  +   +++LI +    G   RA +    M   G+  D V Y  +
Sbjct: 592 DTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNAL 651

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I+G+ ++  + +AL    +ML +G    + TYN +L GL  A ++++A ++ ++M + G+
Sbjct: 652 IHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGL 711

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD   + TLI GH K GN  +A+  +  M  K + P   TYN LI+ F KVG+M++A +
Sbjct: 712 DPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARE 771

Query: 297 LWADMISRKISPNYISYGILINGYCSMG------------HVTEAFRLWYEMVGKGIKPT 344
           L  +M  R++ PN  +Y ILI G+C++             + TEA  L+ EM  KG  P 
Sbjct: 772 LLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPC 831

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKM 371
             +   I   + R G    A   L  M
Sbjct: 832 ENTLACISSTFARPGMVVDAKHMLKDM 858



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 144/286 (50%), Gaps = 11/286 (3%)

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N ++       ++++  DL++EML  GV P+ +T   L+H  CK G+++ AL   D++ 
Sbjct: 14  WNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLAL---DLIR 70

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
              I  D VTYNT I GFC+ G   +     + M+ +    +  +  IL+ G+C +G V 
Sbjct: 71  NVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVK 130

Query: 328 EAFRLWYEMVG--------KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
               +   ++           ++P LV+  T+I  YC+    S+A     +M+S+G  PD
Sbjct: 131 YGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPD 190

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            ++Y+++ING  +   + +A AL+ +M+  G+ P+ + Y +++    + G   +S +   
Sbjct: 191 VVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQS 250

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +MI  G++ D    TTLI+G        EA      + +   +P++
Sbjct: 251 QMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNN 296



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 121/254 (47%), Gaps = 40/254 (15%)

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I P +  +N LI  F   G + +   L+++M+S  + PN  ++ IL++ +C MGH++ A 
Sbjct: 7   IVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLAL 66

Query: 331 RL-----------------W---------------YEMVGKGIKPTLVSCNTIIKGYCRS 358
            L                 W                 MV K       +CN ++KG+CR 
Sbjct: 67  DLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRI 126

Query: 359 GDASKADEFLSKMVSE--------GVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           G     +  +  ++ +         ++P+ ++Y TLI+ + ++  + +A +L  +M + G
Sbjct: 127 GSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDG 186

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
            +PDV+TY+ I+ G C++G + +++ +L  M + G+NP+   Y  L++      +  E+F
Sbjct: 187 FLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESF 246

Query: 471 RFHDEMLQRGFVPD 484
            +  +M+  G   D
Sbjct: 247 IYQSQMIVCGVSFD 260


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 147/473 (31%), Positives = 249/473 (52%), Gaps = 11/473 (2%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  L +  ++D A   +  +   G  P  +  N LI   C +G + +A +++ ++   G 
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GP 124

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
              + TYN+++NG C+ G  D A+ ++D    +  +PDT TYN L+   C +  + +A  
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMID---SVPFAPDTFTYNPLIRALCVRGCVLDALA 181

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F +M  RG +P +V++S L+    +     +A++   EM+S G  PD V Y ++IN  C
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
             G V EALK+ + +   GC  D VTY  +L  LC ++   EAD L  +M      PD  
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEV 301

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK----L 297
           TF  +I   C+ G + +A  +   M++    PDI+TY++++DG CK   +++A K    L
Sbjct: 302 TFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY-C 356
            A+M+S+   P+ +++  +I   C  G    A ++  EM   G  P + + N I+ G+ C
Sbjct: 362 LAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLC 421

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           +S    +A + L+ MVS G+ PD+ +Y +L  G  RE+ M++A  +  +++  GL PD +
Sbjct: 422 KSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKM 481

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            YN IL G C++ R   +      M+  G  PD STY  L+ G   +  L+EA
Sbjct: 482 LYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEA 534



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 222/443 (50%), Gaps = 11/443 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC D ++  A+  +   E  G     +TYNT++N YCR G ++ A ++++S+    
Sbjct: 102 LIKKLCADGRVADAERVV---EALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP--- 155

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTYN LI  LC +G    A  V D+ML  G SP   TY+ LL  +C++    +A 
Sbjct: 156 FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAV 215

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  +G  PDIV+++ LI      G +  AL     + S G  PD V YT ++   
Sbjct: 216 VLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSL 275

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +    EA K+  +M    C  D VT+N ++  LC+   +  A  +  +M E G  PD 
Sbjct: 276 CSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDI 335

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDI----MTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            T+++++ G CK+  +++A+ L       M  K+  PD VT+NT+I   C+ G  ++A K
Sbjct: 336 ITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIK 395

Query: 297 LWADMISRKISPNYISYGILINGY-CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           +  +M      P+  +Y  +++G+ C      EA  L   MV  G+ P   +  ++  G 
Sbjct: 396 VVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGL 455

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            R  +  +A     ++ + G+ PD + YN ++ G  ++   D A    + M + G +PD 
Sbjct: 456 SREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDE 515

Query: 416 ITYNVILTGFCRQGRMHDSELIL 438
            TY +++ G   +G + +++ +L
Sbjct: 516 STYIILVEGIAYEGFLEEAKELL 538



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 210/411 (51%), Gaps = 8/411 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN  C+   ID+A+  +   +     PDT TYN LI A C  G + +A  + + M  +G
Sbjct: 134 MVNGYCRAGNIDAARRMI---DSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRG 190

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY+ L++  CK+    +A  +LDEM   G  PD  TYN L+   C + ++ EA 
Sbjct: 191 CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEAL 250

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   +   G  PD V+++ ++     + + + A     +M S    PD V +  +I   
Sbjct: 251 KVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSL 310

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA----DDLFNEMLERGV 236
           C+ GFV  A K+  +M E GC  D++TY++I++GLC+ + + EA     +L  EM+ +  
Sbjct: 311 CQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNC 370

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF-CKVGEMEKAN 295
            PD  TF T+I   C+ G  ++A+ + D M++    PDI TYN ++DGF CK  + E+A 
Sbjct: 371 IPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEAL 430

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            L   M+S  + P+  +Y  L  G      +  A  ++  +   G+ P  +  N I+ G 
Sbjct: 431 DLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGL 490

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           C+      A +F + MVS G  PD  +Y  L+ G   E  +++A  L+  +
Sbjct: 491 CKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 223/458 (48%), Gaps = 11/458 (2%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N  +    + G L+ A +L++S+SG G  P V   N LI  LC  GR   A+ V++    
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVE---A 121

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           +G S    TYNT++   CR  N+  A  +   +     APD  +++ LI      G +  
Sbjct: 122 LGPSATIITYNTMVNGYCRAGNIDAARRM---IDSVPFAPDTFTYNPLIRALCVRGCVLD 178

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           AL  F +M   G  P  V Y+I+++  C+     +A+ + DEM  KGC  D+VTYN ++N
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
            +C    + EA  + N +   G  PD  T+T ++   C      +A  L   M      P
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D VT+N +I   C+ G + +A K+ A M     +P+ I+Y  +++G C    V EA +L 
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 334 ----YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
                EMV K   P  V+ NTII   C+ G   +A + + +M   G  PD  +YN +++G
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDG 418

Query: 390 FV-REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           F+ +    ++A  L++ M + GL PD  TY  +  G  R+  M  +  +  R+   GL+P
Sbjct: 419 FLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSP 478

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           D+  Y  ++ G   +     A  F   M+  G +PD++
Sbjct: 479 DKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDES 516



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 2/124 (1%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LCK  K + A   L  M   G+ PDT TY +L     RE  +E A  +   +   GL P 
Sbjct: 420 LCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPD 479

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN-MSEAEEIF 123
              YN+++ GLCKK R D A +    M+  G  PD +TY  +LVE    E  + EA+E+ 
Sbjct: 480 KMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTY-IILVEGIAYEGFLEEAKELL 538

Query: 124 CEMS 127
             +S
Sbjct: 539 GNLS 542


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 267/484 (55%), Gaps = 7/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK++++D A   L EM  KG  PD V+Y TLI++ C+ G ++EA +L  S +   
Sbjct: 187 LLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT--- 243

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  YN+LING+CK+   + A ++LDEM+  G+ P+  +Y T++       N+  + 
Sbjct: 244 --PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSL 301

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  RG +P++ +F++LI  F   G    AL ++  M   G+VP+ V Y  +++G 
Sbjct: 302 AVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGL 361

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + +A+ + ++M   GC  +V TY+ +++G  +A  L  A +++N M+  G  P+ 
Sbjct: 362 CSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNV 421

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T ++   C++   N+A  L + M  ++  P+ VT+NT I G C  G ++ A K++  
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQ 481

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +    PN  +Y  L++         EAF L  +M  +GI+  LV+ NTII GYC +G 
Sbjct: 482 MGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGM 541

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E L KMV  G  PD+I+ N +I+ + ++  ++ A  L+ ++      PD+I Y  
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD--EMLQ 478
           +++G C    + ++ + L RM+ +G++P+ +T+  L+    S      A +F D   ++Q
Sbjct: 602 LISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSIMQ 661

Query: 479 RGFV 482
             FV
Sbjct: 662 PKFV 665



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 257/519 (49%), Gaps = 40/519 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L  + ++D  +  L +M+ +G+      + ++I +Y R G  E+A +    M    
Sbjct: 82  MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFR 141

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V  YN +++ L  + R      +   M + G+ P+  TYN LL   C+   +  A 
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS +G  PD VS++TLI    + G++  A    RE+ +    P   +Y  +ING 
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA----REL-AMSFTPSVPVYNALINGV 256

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+     EA ++ DEM+ KG   +V++Y TI+N L  A  +  +  +  +M  RG  P+ 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN--------------------- 279
           +TFT+LI G    G  ++AL+ +D M ++ + P++V YN                     
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 280 --------------TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                          LIDG+ K G+++ A+++W  MI+    PN ++Y  +++  C    
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +A+ L   M  +   P  V+ NT IKG C SG    A +   +M + G  P++ +YN 
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++  +++    +AF LV  ME++G+  +++TYN I+ G+C  G + ++  +L +M+ +G
Sbjct: 497 LLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRG 556

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             PD  T   +I+ +  Q  +  A +  D +    + PD
Sbjct: 557 TKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPD 595



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 205/455 (45%), Gaps = 30/455 (6%)

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
           + K  K    TY  +I  L  +   D  + +L +M   G+S     + +++    R  + 
Sbjct: 68  NSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSS 127

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A + F  M    V P +  ++ ++       +       +  MK  G+ P+   Y I+
Sbjct: 128 EQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNIL 187

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI------------------------- 211
           +   C+N  V  A K+  EM  KGC  D V+Y T+                         
Sbjct: 188 LKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVP 247

Query: 212 -----LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
                +NG+C+     EA  L +EM+ +G+ P+  ++TT+I+     GN+  +L +   M
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             +   P++ T+ +LI GF   G   +A   W  MI   + PN ++Y  L++G CS   +
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A  ++ +M   G  P + + + +I GY ++GD   A E  + M++ G  P+ ++Y  +
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           ++   R    ++A+ L+  M+ +   P+ +T+N  + G C  GR+  +  +  +M   G 
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            P+ +TY  L++  +      EAF    +M  RG 
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 172/349 (49%), Gaps = 5/349 (1%)

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           +++  +I   +   ++D      ++MK  G+     L+  +I  Y R G   +ALK    
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M +      V  YN IL+ L         + +++ M + G+ P+ +T+  L+   CK+  
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           ++ A  L   M+ K   PD V+Y TLI   CK+G++++A +L     +   +P+   Y  
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNA 251

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LING C      EAF+L  EM+ KGI P ++S  TII     +G+   +   L+KM + G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             P+  ++ +LI GF  +    +A     +M  +G+VP+V+ YN ++ G C +  + D+ 
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  +M   G  P+  TY+ LI+G+    +L  A    + M+  G  P+
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPN 420



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 259 ALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           AL  F  I   KS K   +TY  +I+      EM+    L   M    IS +   +  +I
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
             Y   G   +A + +Y M    +KPT+   N I+            +   S M  +G++
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+  +YN L+    +   +D A  L+ +M ++G  PD ++Y  +++  C+ G++ ++   
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--- 235

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             R +     P    Y  LING   +   +EAF+  DEM+ +G  P+
Sbjct: 236 --RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPN 280



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 60/147 (40%)

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           K  K T ++   +I+      +       L +M  EG+      + ++I  + R  + ++
Sbjct: 70  KSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQ 129

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A     +M++  + P V  YN IL     + R      I   M + G+ P+  TY  L+ 
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                N +  A +   EM  +G  PD+
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDE 216


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 258/499 (51%), Gaps = 19/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C + K+  A+  L EME++G  PD   Y  LI+ YC  G L +A  L + M  KG
Sbjct: 295 VIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKG 354

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K      +S++ GL + G          E  +MG+  D A YN ++   C+   + EA 
Sbjct: 355 VKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAV 414

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  + + PDI++++T+I  +   G++  AL  +REMK  G  PD V Y ++  G+
Sbjct: 415 ELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGF 474

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            RNG   EAL + + M  +G   D VT+N I+ GLC    + +A   F+ + E+ +    
Sbjct: 475 SRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCL---- 530

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++ +++G+C+  ++NKA  L   ++++       ++  L+   C  G+ EKA  L   
Sbjct: 531 ENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLET 590

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++  I+P  I Y  +I      G + +A  ++  +V +G+ P +++   +I GYCR   
Sbjct: 591 MVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNK 650

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVR---------------EENMDKAFALVSK 405
             +A   L  M + G++PD I+Y  L+N   +               +ENM    AL S+
Sbjct: 651 MKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSE 710

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M++  + PDVI Y V++   C+   + D+  +   MI++GL PD  TYT L++G+ +  N
Sbjct: 711 MKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGN 770

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +K+A    DEML +G  PD
Sbjct: 771 IKKAVVLFDEMLNKGIRPD 789



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 158/565 (27%), Positives = 253/565 (44%), Gaps = 81/565 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  K+D A     +++  G+ P+  TY   I  +CR+G L EA  +   M   G
Sbjct: 190 LMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESG 249

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  F+Y + I GLC  GR D   +VL +++   +  D   Y  ++   C +  + EAE
Sbjct: 250 VTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAE 309

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM ++G APD+  +  LI  +   G L +AL    EM S G+  + V+ + I+ G 
Sbjct: 310 SILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGL 369

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   E      E  + G   D   YN +++ LC+   + EA +L  EM  + + PD 
Sbjct: 370 SQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDI 429

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TT+I G+   G +  ALN++  M     KPDIVTYN L  GF + G  ++A  L   
Sbjct: 430 INYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNY 489

Query: 301 MISRKISPNYIS-------------------------------YGILINGYCSMGHVTEA 329
           M ++ + P+ ++                               Y  ++NGYC   HV +A
Sbjct: 490 METQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKA 549

Query: 330 FRLWYE-----------------------------------MVGKGIKPTLVSCNTIIKG 354
           F L                                      MV   I PT++  + +I  
Sbjct: 550 FALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGA 609

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             ++G+  KA    + +V  G+ PD I+Y  +ING+ R   M +A+ ++  M+N+G+ PD
Sbjct: 610 LFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPD 669

Query: 415 VITYNVILTGFCR---------------QGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           VITY V+L    +               +  M D   +   M +  + PD   YT LI+ 
Sbjct: 670 VITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDK 729

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
           H   NN+++A    +EM+ RG  PD
Sbjct: 730 HCKTNNIQDAINLFNEMIDRGLAPD 754



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 240/508 (47%), Gaps = 39/508 (7%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D A   L + +  G  P  ++ N L+N       ++ A  +   +   GL P  +TY   
Sbjct: 166 DQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIA 225

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I G C+KG    A +V  +M + G++P++ +Y T +   C         ++  ++    +
Sbjct: 226 IKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKI 285

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
             D+ +++ +I  F    +L  A    REM+  G  PD  +Y  +I+GYC  G +L+AL 
Sbjct: 286 PMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALA 345

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + DEM+ KG   + V  ++IL GL +  M +E  + F E  + G+F D   +  ++   C
Sbjct: 346 LHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALC 405

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K G + +A+ L   M  K + PDI+ Y T+I G+   G++  A  ++ +M      P+ +
Sbjct: 406 KLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIV 465

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y +L  G+   G   EA  L   M  +G+KP  V+ N II+G C  G    A  F   +
Sbjct: 466 TYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL 525

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV------------------- 412
             + ++    +Y+ ++NG+    +++KAFAL+ ++  QG +                   
Sbjct: 526 EEKCLE----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDS 581

Query: 413 ----------------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
                           P +I Y+ ++    + G M  ++ +   ++++GL PD  TYT +
Sbjct: 582 EKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIM 641

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ING+   N +KEA+    +M  RG  PD
Sbjct: 642 INGYCRMNKMKEAWHVLGDMKNRGIEPD 669



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 224/447 (50%), Gaps = 21/447 (4%)

Query: 43  EGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTAT 102
           +G   E+F ++  +S           ++LI      G  D+A +VL +    G +P   +
Sbjct: 138 DGIANESFSVLVQVS-----------DALIKVCVASGMFDQAFDVLLQTKHCGFAPQILS 186

Query: 103 YNTL---LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
            N L   LVES RK +M+ A  I+ ++   G+ P+  +++  I  F R G L  A+  FR
Sbjct: 187 CNFLMNRLVES-RKVDMAIA--IYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFR 243

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           +M+ +G+ P++  YT  I G C +G      K+  +++     MDV  Y  ++ G C   
Sbjct: 244 DMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEM 303

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            L EA+ +  EM ++G  PD Y +  LI G+C  GN+ KAL L D M  K +K + V  +
Sbjct: 304 KLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILS 363

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           +++ G  ++G   +    + +     I  +   Y ++++  C +G V EA  L  EM GK
Sbjct: 364 SILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGK 423

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
            + P +++  T+I GY   G    A     +M   G  PD ++YN L  GF R     +A
Sbjct: 424 KMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEA 483

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            +L++ ME QG+ PD +T+N+I+ G C  G++ D++     + EK L      Y+ ++NG
Sbjct: 484 LSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCL----ENYSAMVNG 539

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +   N++ +AF     + ++G +   A
Sbjct: 540 YCEANHVNKAFALLIRLSKQGRILKKA 566



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 168/347 (48%), Gaps = 54/347 (15%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM+  G  PD VTYN L   + R G  +EA  L+N M  +G+KP   T+N +I GLC  G
Sbjct: 454 EMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGG 513

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG--------- 130
           + D A+   D + +  L      Y+ ++   C   ++++A  +   +S++G         
Sbjct: 514 KVDDAQAFFDNLEEKCLE----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFF 569

Query: 131 --------------------------VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
                                     + P ++ +S +IG   + G++++A   F  +   
Sbjct: 570 KLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDR 629

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM---- 220
           GL PD + YTI+INGYCR   + EA  +  +M  +G   DV+TY  +LN   +  +    
Sbjct: 630 GLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSS 689

Query: 221 -----------LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
                      + +   L++EM +  + PD   +T LI  HCK  N+  A+NLF+ M  +
Sbjct: 690 SSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDR 749

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            + PD VTY  L+ G+C VG ++KA  L+ +M+++ I P+  +  +L
Sbjct: 750 GLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 204/458 (44%), Gaps = 57/458 (12%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL-- 106
           AF   N +   G     +TY +++  LC  G   +   +L E+++   + D    N    
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135

Query: 107 -------------------LVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
                              L++ C    M  +A ++  +    G AP I+S + L+    
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLV 195

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
            + ++D A+  +R++K+ GL P++  YTI I G+                          
Sbjct: 196 ESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGF-------------------------- 229

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
                    CR   L EA D+F +M E GV P+ +++TT I G C  G  +    +   +
Sbjct: 230 ---------CRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDV 280

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               I  D+  Y  +I GFC   ++++A  +  +M  +  +P+   Y  LI+GYC +G++
Sbjct: 281 INAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNL 340

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A  L  EMV KG+K   V  ++I++G  + G AS+      +    G+  D   YN +
Sbjct: 341 LKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVV 400

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           ++   +   +++A  L+ +M+ + +VPD+I Y  +++G+  +G++ D+  I   M + G 
Sbjct: 401 MDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGH 460

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            PD  TY  L  G       +EA    + M  +G  PD
Sbjct: 461 KPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPD 498



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 140/267 (52%), Gaps = 20/267 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN  C+ + ++ A   L  + ++G      ++  L+   C EG  E+A  L+ +M    
Sbjct: 536 MVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALN 595

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +  Y+ +I  L + G  ++A+ V + ++  GL+PD  TY  ++   CR   M EA 
Sbjct: 596 INPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAW 655

Query: 121 EIFCEMSRRGVAPDIVSFSTLI----------------GIFSRNGQLDRALMYFREMKSA 164
            +  +M  RG+ PD+++++ L+                 + S+   +D + ++  EMK  
Sbjct: 656 HVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALW-SEMKDM 714

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
            + PD + YT++I+ +C+   + +A+ + +EM+++G   D VTY  +L+G C    + +A
Sbjct: 715 DIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKA 774

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHC 251
             LF+EML +G+ PD +T + L   HC
Sbjct: 775 VVLFDEMLNKGIRPDAHTMSVL---HC 798



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 149/338 (44%), Gaps = 23/338 (6%)

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A  YF ++K +G   D   Y  I+   C  G+  +   +  E+++K   +D    N    
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVN---- 131

Query: 214 GLCRAKMLTEA--DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS- 270
                  L EA  D + NE     V         LI      G  ++A   FD++ Q   
Sbjct: 132 -------LFEALGDGIANESFSVLV----QVSDALIKVCVASGMFDQA---FDVLLQTKH 177

Query: 271 --IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
               P I++ N L++   +  +++ A  ++  + +  ++PN  +Y I I G+C  G++ E
Sbjct: 178 CGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAE 237

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  ++ +M   G+ P   S  T I+G C  G +    + L  +++  +  D  +Y  +I 
Sbjct: 238 AIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIR 297

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           GF  E  + +A +++ +ME QG  PDV  Y  +++G+C  G +  +  +   M+ KG+  
Sbjct: 298 GFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKT 357

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +    ++++ G        E      E  + G   D+A
Sbjct: 358 NCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEA 395


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 258/499 (51%), Gaps = 15/499 (3%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++  C+   +    + L EME  G  P  VTY +LIN   ++G LE+   L   M  +G
Sbjct: 1019 LIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRG 1078

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P V  YNS+I+ LC      +A  +L +M   G  PD  T+NTL+   C + ++ +AE
Sbjct: 1079 FSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 1138

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                E  RR + P+ +S++ LI  F   G+L  A     EM   G  PD V +  +I+G 
Sbjct: 1139 HFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGL 1198

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
               G V EAL +R++M E+    DV  YN +++GLC+ +ML  A ++  EMLE+ V PD 
Sbjct: 1199 VVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDE 1258

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            + + TLI G  +  N+  A  +F+ M  K + PDIV+ N +I G+C+ G M +A    ++
Sbjct: 1259 FVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSN 1318

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M      P+  +Y  +I+GY   G++  A R   +M+ +  KP +V+ +++I GYC++GD
Sbjct: 1319 MRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGD 1378

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
               A+   + M +E + P+ ++Y  LI    +++ + +A      M      P+ +T + 
Sbjct: 1379 TDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHY 1438

Query: 421  ILTGF------------CRQGRMH--DSELILWRMIEKGL-NPDRSTYTTLINGHVSQNN 465
            ++ G             C    +H  D+ L++++ +   + +P  S Y  +I      N 
Sbjct: 1439 LVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNM 1498

Query: 466  LKEAFRFHDEMLQRGFVPD 484
            L+EA  F + M ++G+VP+
Sbjct: 1499 LREALDFKNRMAKKGYVPN 1517



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 251/485 (51%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  L +  + D A+    EM  K    D  +   L+   C E  +EE  +L+ +  G G
Sbjct: 949  LLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAG 1008

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P V  YN LI+G C++G   R   +L EM   G  P   TY +L+    +K ++ +  
Sbjct: 1009 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIG 1068

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +F EM +RG +P++  ++++I          +A++  ++M ++G  PD + +  +I G 
Sbjct: 1069 SLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGL 1128

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C  G V +A     E + +    + ++Y  +++G C    L  A DL  EM+ RG  PD 
Sbjct: 1129 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDV 1188

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             TF  LIHG    G +++AL + + MT++ + PD+  YN LI G CK   +  A  +  +
Sbjct: 1189 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEE 1248

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M+ + + P+   Y  LI+G+    ++ +A +++  M  KG+ P +VSCN +IKGYC+ G 
Sbjct: 1249 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGM 1308

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             S+A   +S M   G  PD  +Y T+I+G+ ++ N++ A   +  M  +   P+V+TY+ 
Sbjct: 1309 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSS 1368

Query: 421  ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            ++ G+C+ G    +E +   M  + L+P+  TYT LI     ++ +  A  + + ML   
Sbjct: 1369 LINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1428

Query: 481  FVPDD 485
              P+D
Sbjct: 1429 CSPND 1433



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 244/474 (51%), Gaps = 1/474 (0%)

Query: 12   DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNS 70
            D+    L  M   G  P       L+ AY   G L +A ++   +  + G  P V   N 
Sbjct: 889  DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNR 948

Query: 71   LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
            L+  L ++ R D A+++ DEML      D  +   L+   C +  + E  ++       G
Sbjct: 949  LLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAG 1008

Query: 131  VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
              P +V ++ LI  + R G + R L+   EM++ G +P  V Y  +IN   + G + +  
Sbjct: 1009 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIG 1068

Query: 191  KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
             +  EM ++G   +V  YN++++ LC  +  T+A  +  +M   G  PD  TF TLI G 
Sbjct: 1069 SLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGL 1128

Query: 251  CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
            C +G++ KA +      ++ + P+ ++Y  LI GFC  GE+  A+ L  +M+ R  +P+ 
Sbjct: 1129 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDV 1188

Query: 311  ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +++G LI+G    G V+EA  +  +M  + + P +   N +I G C+      A   L +
Sbjct: 1189 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEE 1248

Query: 371  MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
            M+ + V PD   Y TLI+GF+R EN+  A  +   ME++G+ PD+++ N ++ G+C+ G 
Sbjct: 1249 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGM 1308

Query: 431  MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M ++ L +  M + G  PD  TYTT+I+G+  Q NL  A R+  +M++R   P+
Sbjct: 1309 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPN 1362



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 229/457 (50%), Gaps = 20/457 (4%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ALC       A + L +M   G  PD +T+NTLI   C EG + +A   +     + 
Sbjct: 1089 VIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 1148

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            L P   +Y  LI+G C +G    A ++L EM+  G +PD  T+  L+        +SEA 
Sbjct: 1149 LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 1208

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  +M+ R V PD+  ++ LI    +   L  A     EM    + PD  +Y  +I+G+
Sbjct: 1209 IVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGF 1268

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             R+  + +A K+ + M  KG   D+V+ N ++ G C+  M++EA    + M + G  PD 
Sbjct: 1269 IRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDE 1328

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +T+TT+I G+ K GN+N AL     M ++  KP++VTY++LI+G+CK G+ + A  L+A+
Sbjct: 1329 FTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFAN 1388

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY----- 355
            M +  +SPN ++Y ILI        V  A   +  M+     P  V+ + ++ G      
Sbjct: 1389 MQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTP 1448

Query: 356  -------CRSGDASKADEFL---SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
                   C + +    D  L    K+V +  DP + +YN +I    R   + +A    ++
Sbjct: 1449 CVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNR 1508

Query: 406  MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
            M  +G VP+ IT+  +L GFC  G+      + WR I
Sbjct: 1509 MAKKGYVPNPITFLSLLYGFCSVGKS-----VNWRTI 1540



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 11/132 (8%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVY----PDTVTYNTLINAYCREGFLEEAFQLMNSM 56
            ++N++C +      K  L  + +K V+    P    YN +I + CR   L EA    N M
Sbjct: 1450 VINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRM 1509

Query: 57   SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            + KG  P   T+ SL+ G C  G+    + +L    Q         Y  L        + 
Sbjct: 1510 AKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEIIFRYKFLF-------DQ 1562

Query: 117  SEAEEIFCEMSR 128
               E + CE+SR
Sbjct: 1563 YATESVCCEVSR 1574


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 261/452 (57%), Gaps = 19/452 (4%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           L+ AY +   L  A++        G K  + + N L++ L K+ +    + V  EM++  
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG---QLD 152
           +  +  T+N  +   CR   +++AE+   +M   G++P++V+++TL+  + + G   ++ 
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           +A  + +EM +  + P+ V +  +I+G+C++  V  A K  +EM ++G   ++VTYN+++
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           NGLC    L EA DL+++M+  G+ P+  T+  LI+G CK   M +A  +FD ++++ + 
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+++T+NT+ID +CK G ME+   L + M+   I PN  +Y  LI G C    +  A  L
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             EM  KG+K  +V+ N +I G C++  +  A++ L++M + G+ P+ ++YNTL++G+  
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCM 495

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           E  +  A  + ++ME +   P+V+TYNV++ G+C+  ++  +  +L  M+EKGLNP+R+T
Sbjct: 496 EGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTT 555

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y              +  R   EML++GF PD
Sbjct: 556 Y--------------DIVRL--EMLEKGFSPD 571



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 240/431 (55%), Gaps = 26/431 (6%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N L++A  +E  + +   +   M  + +   + T+N  INGLC+ G+ ++A++ +++M  
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228

Query: 94  MGLSPDTATYNTLLVESCRKEN---MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
            G+SP+  TYNTL+   C++ +   M +AE    EM    + P+ V+F+TLI  F ++  
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +  A   F EM+  GL P+ V Y  +ING C NG + EA+ + D+M+  G   ++VTYN 
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNA 348

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++NG C+ KM+ EA  +F+++ ++ + P+  TF T+I  +CK+G M +  +L   M  + 
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I P++ TYN LI G C+  +++ A +L  +M ++ +  + ++Y ILI+G C       A 
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           +L  EM   G+KP  V+ NT++ GYC  G    A    ++M  E   P+ ++YN LI G+
Sbjct: 469 KLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGY 528

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +   ++ A  L+++M  +GL P+  TY+++        R+         M+EKG +PD 
Sbjct: 529 CKINKLEAANGLLNEMLEKGLNPNRTTYDIV--------RLE--------MLEKGFSPD- 571

Query: 451 STYTTLINGHV 461
                 I GH+
Sbjct: 572 ------IEGHL 576



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 194/319 (60%), Gaps = 3/319 (0%)

Query: 1   MVNALCKDH---KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           +V+  CK     K+  A+ F+ EM    + P+ VT+NTLI+ +C++  +  A +    M 
Sbjct: 241 LVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQ 300

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            +GLKP + TYNSLINGLC  G+ + A ++ D+M+ +GL P+  TYN L+   C+K+ M 
Sbjct: 301 KQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMK 360

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA ++F ++S++ + P++++F+T+I  + + G ++        M   G++P+   Y  +I
Sbjct: 361 EATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLI 420

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G CR   +  A ++ +EM  KG   DVVTYN +++GLC+      A+ L NEM   G+ 
Sbjct: 421 AGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLK 480

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+ TL+ G+C +G +  ALN+   M ++  +P++VTYN LI G+CK+ ++E AN L
Sbjct: 481 PNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGL 540

Query: 298 WADMISRKISPNYISYGIL 316
             +M+ + ++PN  +Y I+
Sbjct: 541 LNEMLEKGLNPNRTTYDIV 559



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 78/160 (48%), Gaps = 5/160 (3%)

Query: 332 LWYEMVGKGIKP--TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
           +++ ++  G +P  T +  + ++  Y ++ +   A E  ++    G      S N L++ 
Sbjct: 115 VFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSA 174

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
            V+E  +     +  +M  + +  ++ T+N+ + G CR G+++ +E  +  M   G++P+
Sbjct: 175 LVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPN 234

Query: 450 RSTYTTLINGHV---SQNNLKEAFRFHDEMLQRGFVPDDA 486
             TY TL++G+    S   + +A  F  EML     P++ 
Sbjct: 235 VVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEV 274


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 240/484 (49%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+   +  A+ +L  M + G  PD  T+N+LI  YCR   LE A  L   M  +G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRG 194

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +Y +LI G C+ GR D A E+  EM Q    PD  T+  L+   C      E  
Sbjct: 195 FSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGL 250

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G  P   +++ L+ ++ R  + + A     EM  +GL+P  V  TI++N Y
Sbjct: 251 CMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAY 310

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A+++ + M  KGC  +V TYN I+ G C A  + +A  L ++M E GV PD 
Sbjct: 311 CREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDV 370

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G C DG++  A  L  +M    +  D  TYN LID  CK G++++A  L+  
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R I PN +++  +ING C  G    A      M+  G  P   + +  I+  C++  
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKG 490

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + +   F+ +M+ + V P +++Y  +IN    E N   A  +  +M +QG  PDV+TY  
Sbjct: 491 SQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTT 550

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  +C +GR+ ++E ++  M +     D   Y TLI+GH S      A      M    
Sbjct: 551 SVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVA 610

Query: 481 FVPD 484
            +P+
Sbjct: 611 SMPN 614



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 226/453 (49%), Gaps = 5/453 (1%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLK-PGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           + +L+  + R        +L   M       P   TYN+LI  LC++     A+  L  M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           ++ G  PD  T+N+L++  CR + +  A ++FC+M  RG + D VS++ LI  F   G++
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D AL  FREM      PD   +  ++ G C  G   E L M  +M E G       Y  +
Sbjct: 216 DEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAAL 271

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++  CR +   EA+ + NEM + G+ P   T T +++ +C++G M+ A+ +F+ M  K  
Sbjct: 272 VDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           +P++ TYN ++ GFC  G++ KA  L   M    + P+ ++Y +LI G C  GH+  AFR
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFR 391

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L   M G G+     + N +I   C++G   +A      +   G+ P+S+++NT+ING  
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLC 451

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +    D A   +  M + G  PD  TY+  +   C+     +    +  M++K + P   
Sbjct: 452 KAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTV 511

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            YT +IN   ++ N   A R   +M+ +G  PD
Sbjct: 512 NYTIVINRLFNERNYGLATRIWGQMVSQGCSPD 544



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 230/453 (50%), Gaps = 4/453 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  +++ A    C+M  +G   D V+Y  LI  +C  G ++EA +L   M+   
Sbjct: 170 LILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT--- 226

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P ++T+ +L+ GLC  GR +    +L +M ++G  P T  Y  L+   CR++   EAE
Sbjct: 227 -QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAE 285

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  EM   G+ P +V+ + ++  + R G++  A+  F  M+  G  P+   Y  I+ G+
Sbjct: 286 KILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGF 345

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A+ + D+M E G   DVVTYN ++ G C    +  A  L   M   G+  D 
Sbjct: 346 CNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQ 405

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+  LI   CK G +++A +LFD +  + I+P+ VT+NT+I+G CK G+ + A     +
Sbjct: 406 YTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLEN 465

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS   +P+  +Y   I   C      E      EM+ K +KP+ V+   +I       +
Sbjct: 466 MISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERN 525

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +MVS+G  PD ++Y T +  +  E  +D+A  +V++M+    + D + YN 
Sbjct: 526 YGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNT 585

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           ++ G    G+   +  IL  M      P+  T+
Sbjct: 586 LIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 225/449 (50%), Gaps = 4/449 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   TYN LI A CR   L  A + ++ M   G +P  FT+NSLI G C+  + + A ++
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M   G S D  +Y  L+   C    + EA E+F EM++    PD+ + + L+     
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+ +  L   ++MK  G  P    Y  +++ +CR     EA K+ +EM + G +  VVT
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
              ++N  CR   ++ A  +F  M  +G  P+ +T+  ++ G C  G + KA+ L D M 
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  ++PD+VTYN LI G C  G +  A +L   M    ++ +  +Y +LI+  C  G V 
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+  +  +GI+P  V+ NT+I G C++G    A  FL  M+S G  PD+ +Y+  I
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
               + +   +    + +M  + + P  + Y +++     +     +  I  +M+ +G +
Sbjct: 483 ENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCS 542

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           PD  TYTT +  + ++  L EA     EM
Sbjct: 543 PDVVTYTTSVRAYCNEGRLDEAENVVTEM 571



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 234/490 (47%), Gaps = 19/490 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C++ K + A+  L EM   G+ P  VT   ++NAYCREG +  A ++  SM  KG
Sbjct: 271 LVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V+TYN+++ G C  G+  +A  +LD+M + G+ PD  TYN L+   C   ++  A 
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+A D  +++ LI    + G++D A   F  ++  G+ P++V +  +ING 
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A    + M+  G   D  TY+  +  LC+ K   E     +EML++ V P  
Sbjct: 451 CKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPST 510

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I+    + N   A  ++  M  +   PD+VTY T +  +C  G +++A  +  +
Sbjct: 511 VNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTE 570

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP--------------TLV 346
           M   +   + ++Y  LI+G+ S+G    A  +   M G    P                +
Sbjct: 571 MKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRL 630

Query: 347 SCNTIIKGYCRSGDASKAD--EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + +  +K          AD  E    M    V   + +Y +++ GF  E  +D+  +LVS
Sbjct: 631 AEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVS 690

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ- 463
            M+ + L  +   YN ++  FC+     D+  +L  MI  G  P+   Y  L++G  ++ 
Sbjct: 691 LMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEG 750

Query: 464 --NNLKEAFR 471
             +  KE FR
Sbjct: 751 QADRAKEIFR 760



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 16/299 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L  +     A     +M  +G  PD VTY T + AYC EG L+EA  ++  M    
Sbjct: 516 VINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD---------------TATYNT 105
                  YN+LI+G    G+ DRA  +L  M  +   P+                A +  
Sbjct: 576 TIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVP 635

Query: 106 LLVESCRKE-NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           L   S  K   +++  E+F  M +  V     ++ +++  FS   +LD        MK  
Sbjct: 636 LKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEE 695

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
            L  +  +Y  ++N +C+     +A  +   M+  G + +++ Y  +L+GL        A
Sbjct: 696 NLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRA 755

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
            ++F     +    D   +  +I G  + G+ +   ++  ++ Q   KP   TY  L +
Sbjct: 756 KEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTE 814



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 47/114 (41%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN  CK      A   LC M   G  P+ + Y  L++    EG  + A ++  S   K 
Sbjct: 707 LVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKE 766

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
                  +  +I+G  +KG  D   +++  + QM   P   TY  L  E   +E
Sbjct: 767 YNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEELPTRE 820


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 138/417 (33%), Positives = 238/417 (57%), Gaps = 5/417 (1%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           L  +E     P+   +  LI A+   G +EEA  +   M    + P +   N +++GL K
Sbjct: 116 LSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVK 170

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           KGR D   +V  +M+  G SP+  TY TL+   CR+ +  +A  +F EM  + + P +V 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ LI       ++  A   FR M+++G++P+   Y  +++GYC+   V +AL++  EML
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G + +VVT+  +++GLC+   +  A     +M   GV P+ + +  LI G+CK GN++
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +AL+L   + +  I PD+ TY+ LI G C V  ME+A+ L  +M  +   PN ++Y  LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +GYC  G++ +A  +  +M  KGI+P +++ +T+I GYC++G    A    ++MV +G+ 
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           PD ++Y  LI+G  ++ N  +AF L  +M+  GL P+V T + ++ G C+ GR+ D+
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527



 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 132/369 (35%), Positives = 209/369 (56%)

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           M   EE      +  V P + + + ++    + G+ D     + +M + G  P+ V Y  
Sbjct: 139 MGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGT 198

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I+G CR G  L+A ++ DEM+EK     VV Y  ++ GLC    ++EA+ +F  M   G
Sbjct: 199 LIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSG 258

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P+ YT+ T++ G+CK  ++ KAL L+  M    + P++VT+  LIDG CK  EM  A 
Sbjct: 259 MLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR 318

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           K   DM S  + PN   Y  LI+GYC  G+++EA  L  E+    I P + + + +IKG 
Sbjct: 319 KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGL 378

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C      +AD  L +M  +G  P++++YNTLI+G+ +E NM+KA  + S+M  +G+ P++
Sbjct: 379 CGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNI 438

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           IT++ ++ G+C+ G+M  +  +   M+ KGL PD   YT LI+GH    N KEAFR H E
Sbjct: 439 ITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498

Query: 476 MLQRGFVPD 484
           M + G  P+
Sbjct: 499 MQEAGLHPN 507



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 135/371 (36%), Positives = 221/371 (59%), Gaps = 1/371 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  + D+      +M  +G  P+ VTY TLI+  CR+G   +AF+L + M  K 
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V  Y  LI GLC + R   A+ +   M   G+ P+  TYNT++   C+  ++ +A 
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++ EM   G+ P++V+F  LI    +  ++  A  +  +M S G+VP+  +Y  +I+GY
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EAL +  E+ +   + DV TY+ ++ GLC    + EAD L  EM ++G  P+ 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G+CK+GNM KA+ +   MT+K I+P+I+T++TLIDG+CK G+ME A  L+ +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+ ++Y  LI+G+   G+  EAFRL  EM   G+ P + + + +I G C+ G 
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523

Query: 361 ASKADE-FLSK 370
            S A + FL+K
Sbjct: 524 ISDAIKLFLAK 534



 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 210/377 (55%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P     N +++   ++G  +  +++   M  +G  P V TY +LI+G C++G   +A 
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            + DEM++  + P    Y  L+   C +  +SEAE +F  M   G+ P++ +++T++  +
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +   + +AL  ++EM   GL+P+ V + I+I+G C+   ++ A K   +M   G V ++
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN +++G C+A  L+EA  L +E+ +  + PD +T++ LI G C    M +A  L   
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +K   P+ VTYNTLIDG+CK G MEKA ++ + M  + I PN I++  LI+GYC  G 
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  L+ EMV KG+ P +V+   +I G+ + G+  +A     +M   G+ P+  + + 
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513

Query: 386 LINGFVREENMDKAFAL 402
           LI+G  ++  +  A  L
Sbjct: 514 LIDGLCKDGRISDAIKL 530



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 184/338 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+      A     EM +K ++P  V Y  LI   C E  + EA  +  +M   G
Sbjct: 199 LIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSG 258

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P ++TYN++++G CK     +A E+  EML  GL P+  T+  L+   C+ + M  A 
Sbjct: 259 MLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR 318

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +   +M+  GV P+I  ++ LI  + + G L  AL    E++   ++PD   Y+I+I G 
Sbjct: 319 KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGL 378

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA  +  EM +KG + + VTYNT+++G C+   + +A ++ ++M E+G+ P+ 
Sbjct: 379 CGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNI 438

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+TLI G+CK G M  A+ L+  M  K + PD+V Y  LIDG  K G  ++A +L  +
Sbjct: 439 ITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           M    + PN  +   LI+G C  G +++A +L+    G
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTG 536



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 247/494 (50%), Gaps = 30/494 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++ SA+ FL +M   GV P+   YN LI+ YC+ G L EA  L + +    
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY+ LI GLC   R + A  +L EM + G  P+  TYNTL+   C++ NM +A 
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M+ +G+ P+I++FSTLI  + + G+++ A+  + EM   GL+PD V YT +I+G+
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF------------ 228
            ++G   EA ++  EM E G   +V T + +++GLC+   +++A  LF            
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSK 543

Query: 229 -NEMLERGVFPDFYTFTTLIHGHCKDG-NMNKALNLFDIMTQKS------IKPDIVTYNT 280
            NE L+R ++       +L  G  +    + +   LF    Q        +KP     N 
Sbjct: 544 TNE-LDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPP--KSNQ 600

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN-GYCSM-GHVTEAFRLWYEMVG 338
            +  + +     K   L+  ++ RK   +  S+ ++     C++   + E  ++   ++ 
Sbjct: 601 TLKRYLQSSNTSKV-LLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVIN 659

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G +P +    ++I  Y  +G+ + A     ++ S+ +    IS+ ++I+ +V  +  +K
Sbjct: 660 FGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNL----ISWTSVISAYVDNQRPNK 715

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  L  +M+   + PD++T  V L+     G +   E I   +  +GL+ D     +LIN
Sbjct: 716 ALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLIN 775

Query: 459 GHVSQNNLKEAFRF 472
            +     +  A RF
Sbjct: 776 MYSKCGEIGTARRF 789



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 118/537 (21%), Positives = 226/537 (42%), Gaps = 75/537 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +++ A   L EM++KG  P+ VTYNTLI+ YC+EG +E+A ++ + M+ KG
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + T+++LI+G CK G+ + A  +  EM+  GL PD   Y  L+    +  N  EA 
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-------------GIF----------SRNGQLDR---- 153
            +  EM   G+ P++ + S LI              +F          S+  +LDR    
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQ 553

Query: 154 ----ALMYFREMKSAGLV-------------PDNVLYTII--------INGYCRNGFVLE 188
               AL  FR +    +              P   L+T +        +  Y ++    +
Sbjct: 554 MCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSK 613

Query: 189 ALKMRDEMLEKG-CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            L     +L K    +D  +    L        L E   +   ++  G  P  +  T+LI
Sbjct: 614 VLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLI 673

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
             +   GN+  A N+FD +  K    +++++ ++I  +       KA +L+  M    + 
Sbjct: 674 SMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQ 729

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ ++  + ++    +G +     +   +  +G+   L   N++I  Y + G+   A  F
Sbjct: 730 PDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRF 789

Query: 368 LSKMVSEGVDPDSISYNTLI-----NGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
                   V P+ +++  ++      G V E          S  E+  L P +  +  ++
Sbjct: 790 ------SLVLPNDVTFMGVLMACSHAGLVEEGKQH----FRSMKEDYSLRPRISHFGCMV 839

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
              CR G + ++   + +M    + P+   + TL+     Q    +     +++ QR
Sbjct: 840 DLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGMWDKKMLVRNQIKQR 893



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 17/280 (6%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L E  Q+   +   G +P +F   SLI+     G    A  + DE+     S +  ++ +
Sbjct: 647 LVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEI----PSKNLISWTS 702

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++      +  ++A ++F +M    V PDIV+ +  +   +  G LD        ++  G
Sbjct: 703 VISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRG 762

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           L  D  L   +IN Y + G +  A +          + + VT+  +L     A ++ E  
Sbjct: 763 LDTDLCLNNSLINMYSKCGEIGTARRF------SLVLPNDVTFMGVLMACSHAGLVEEGK 816

Query: 226 DLFNEMLE-RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             F  M E   + P    F  ++   C+ G + +A   ++ + +  ++P+ V + TL+ G
Sbjct: 817 QHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLL-G 872

Query: 285 FCKVGEMEKANKLWADMISRKISP--NYISYGILINGYCS 322
            C +  M     L  + I ++  P  + I  GI I  + +
Sbjct: 873 ACSLQGMWDKKMLVRNQIKQRRDPGCSSIEVGIDIKEFVA 912



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 41/205 (20%), Positives = 85/205 (41%), Gaps = 13/205 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A   + + + A     +M+   V PD VT    ++A    G L+    +   +  +G
Sbjct: 703 VISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRG 762

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   +   NSLIN   K G    A+     +      P+  T+  +L+       + E +
Sbjct: 763 LDTDLCLNNSLINMYSKCGEIGTARRFSLVL------PNDVTFMGVLMACSHAGLVEEGK 816

Query: 121 EIFCEMSR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + F  M     + P I  F  ++ +  R G L  A  +  +M    + P+ V++  ++  
Sbjct: 817 QHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGA 873

Query: 180 YCRNGFVLEALKMRDEMLEK---GC 201
               G   + + +R+++ ++   GC
Sbjct: 874 CSLQGMWDKKMLVRNQIKQRRDPGC 898


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 143/449 (31%), Positives = 243/449 (54%), Gaps = 37/449 (8%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K  ++ +F   +E +G +   + ++ L+NAY   G+  +A Q    +    L+    +  
Sbjct: 135 KNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCG 194

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGL-SPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
            L                 D ++++ L SP  A Y  +L   C                 
Sbjct: 195 YL----------------FDRLMKLNLTSPAWAFYEEIL--DC----------------- 219

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G  PD+  F+ L+    +  +++ A + F E+   GL P  V +  +INGYC++G + +
Sbjct: 220 -GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
             +++  M+E     DV TY+ ++NGLC+   L +A+ LF EM +RG+ P+  TFTTLI+
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           GHC  G  +  + ++  M +K +KPD++TYNTLI+G CKVG++ +A KL  +M  R + P
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           +  +Y +LI+G C  G +  A  +  EMV +GI+   V+   +I G+CR G   +A+  L
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M+  G+ PD  +Y  +I+GF ++ ++   F L+ +M+  G VP V+TYNV+L G C+Q
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           G+M ++ ++L  M+  G+ PD  TY  L+
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 123/317 (38%), Positives = 191/317 (60%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+HKI+ A++   E+ ++G+ P  V++NTLIN YC+ G L++ F+L   M    
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY+ LINGLCK+G+ D A ++  EM   GL P+  T+ TL+   C         
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI+ +M R+GV PD+++++TLI    + G L  A     EM   GL PD   YT++I+G 
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  AL++R EM+++G  +D V +  +++G CR   + EA+    EMLE G+ PD 
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +IHG CK G++     L   M      P +VTYN L++G CK G+M+ AN L   
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530

Query: 301 MISRKISPNYISYGILI 317
           M++  + P+ I+Y IL+
Sbjct: 531 MLNLGVVPDDITYNILL 547



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 210/381 (55%), Gaps = 1/381 (0%)

Query: 104 NTLLVESCRKENMSEAEEIFCE-MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
            +LL     ++  + A  +F   +  RG     + FS L+  ++ +G    A+  FR ++
Sbjct: 123 QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVR 182

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
              L         + +   +      A    +E+L+ G   DV  +N +++ LC+   + 
Sbjct: 183 KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKIN 242

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           EA  LF E+ +RG+ P   +F TLI+G+CK GN+++   L   M +  + PD+ TY+ LI
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +G CK G+++ ANKL+ +M  R + PN +++  LING+C  G       ++ +M+ KG+K
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P +++ NT+I G C+ GD  +A + + +M   G+ PD  +Y  LI+G  +E +++ A  +
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEI 422

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M  +G+  D + +  +++GFCR+G++ ++E  L  M+E G+ PD +TYT +I+G   
Sbjct: 423 RKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482

Query: 463 QNNLKEAFRFHDEMLQRGFVP 483
           + ++K  F+   EM   G VP
Sbjct: 483 KGDVKTGFKLLKEMQCDGHVP 503



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 198/348 (56%)

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           S L  + SR G+   + ++   +++ G    N+++++++N Y  +G+  +A++    + +
Sbjct: 124 SLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
               +   +   + + L +  + + A   + E+L+ G  PD   F  L+H  CK+  +N+
Sbjct: 184 HNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINE 243

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  LF  + ++ ++P +V++NTLI+G+CK G +++  +L   M+  ++ P+  +Y +LIN
Sbjct: 244 AQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLIN 303

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           G C  G + +A +L+ EM  +G+ P  V+  T+I G+C +G A    E   +M+ +GV P
Sbjct: 304 GLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKP 363

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D I+YNTLING  +  ++ +A  LV +M  +GL PD  TY +++ G C++G +  +  I 
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             M+++G+  D   +T LI+G   +  + EA R   EML+ G  PDDA
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA 471



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 189/353 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + + L K +    A  F  E+   G  PD   +N L++  C+E  + EA  L   +  +G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V ++N+LING CK G  D+   +   M++  + PD  TY+ L+   C++  + +A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  RG+ P+ V+F+TLI      G+ D  +  +++M   G+ PD + Y  +ING 
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA K+  EM ++G   D  TY  +++G C+   L  A ++  EM++ G+  D 
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             FT LI G C++G + +A      M +  IKPD  TY  +I GFCK G+++   KL  +
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           M      P  ++Y +L+NG C  G +  A  L   M+  G+ P  ++ N +++
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 150/299 (50%), Gaps = 17/299 (5%)

Query: 203 MDVVTYNTILNGLCRAKMLTEADDL----------------FNEMLE-RGVFPDFYTFTT 245
           + + +Y T+ + LC  KML+EA  L                F  +LE RG       F+ 
Sbjct: 101 LSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSV 160

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L++ +   G  + A+  F ++ + +++    +   L D   K+     A   + +++   
Sbjct: 161 LMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCG 220

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+   + +L++  C    + EA  L+ E+  +G++PT+VS NT+I GYC+SG+  +  
Sbjct: 221 YPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF 280

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
                M+   V PD  +Y+ LING  +E  +D A  L  +M ++GLVP+ +T+  ++ G 
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C  GR      I  +M+ KG+ PD  TY TLING     +L+EA +   EM QRG  PD
Sbjct: 341 CVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 119/218 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   + D       +M +KGV PD +TYNTLIN  C+ G L EA +L+  M+ +G
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  FTY  LI+G CK+G  + A E+  EM++ G+  D   +  L+   CR+  + EAE
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM   G+ PD  +++ +I  F + G +       +EM+  G VP  V Y +++NG 
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
           C+ G +  A  + D ML  G V D +TYN +L    +A
Sbjct: 516 CKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQA 553


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 146/429 (34%), Positives = 234/429 (54%), Gaps = 1/429 (0%)

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
           S   +KP + T++ LIN   + G+   A  +L  +L+MG   D     TL+   C K  +
Sbjct: 97  SKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRV 156

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            EA  +  E   RG   D V + T+I    + G+   A+  F +MK   + P+ ++Y  +
Sbjct: 157 LEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTV 216

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG- 235
           I+G C+ G V EA  +  EM+E G  +DV +YN++++G C       A  L +EM+ RG 
Sbjct: 217 IDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGK 276

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           V+PD YTF  LI G CK G +++A N+  +M ++  KPDIV+YN L++G+C  G + +A 
Sbjct: 277 VYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAK 336

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           +++  M+ R   PN ISY  LINGYC +  V EA  L  EM  K + P  V+ N ++ G 
Sbjct: 337 QVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGL 396

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            +SG +    + +  M + G   D I+YN L++ + + E  DKA AL   +   G+ P++
Sbjct: 397 SKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNI 456

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            TYN++L G C+ GR+  ++ I   +  KG  P+  TY  +I+G   +  L EA     +
Sbjct: 457 RTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYK 516

Query: 476 MLQRGFVPD 484
           M+   ++P+
Sbjct: 517 MVNNNYLPN 525



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 237/435 (54%), Gaps = 1/435 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           + P  +T++ LINA+ + G +  AF L+ ++   G +  V    +L+ GLC KGR   A 
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L E +  G   D   Y T++   C+     +A ++F +M +  V P+++ ++T+I   
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-D 204
            + G +D A     EM   G+  D   Y  +I+G+C  G    A+K+ DEM+ +G V  D
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           V T+N +++GLC+   ++EA ++   M++RG  PD  ++  L++G+C  G++ +A  +FD
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +++  P++++Y TLI+G+CKV  +++A  L  +M ++ + P+ ++Y  L++G    G
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
                + L   M   G    L++ N ++  Y +     KA      ++  G+ P+  +YN
Sbjct: 401 RSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYN 460

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L++G  +   +  A  +   +  +G  P++ TYN+++ G C++G + ++E +L++M+  
Sbjct: 461 ILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNN 520

Query: 445 GLNPDRSTYTTLING 459
              P+  T+ T++  
Sbjct: 521 NYLPNYITFDTIVRA 535



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 196/355 (55%), Gaps = 1/355 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  K   A     +M++  VYP+ + YNT+I+  C++G ++EA  L   M   G
Sbjct: 181 IINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENG 240

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
           ++  V++YNS+I+G C  GR   A ++LDEM+  G + PD  T+N L+   C+   +SEA
Sbjct: 241 IELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEA 300

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +   M +RG  PDIVS++ L+  +  +G +  A   F +M     +P+ + Y  +ING
Sbjct: 301 YNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLING 360

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+   V EA+ +  EM  K  V D VTYN +L+GL ++       DL   M   G   D
Sbjct: 361 YCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPAD 420

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+  + K    +KAL LF  + +  I P+I TYN L+DG CK G ++ A +++ 
Sbjct: 421 LITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQ 480

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            + ++   PN  +Y I+I+G C  G + EA  L Y+MV     P  ++ +TI++ 
Sbjct: 481 LLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 208/392 (53%), Gaps = 1/392 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A   L E   +G   D V Y T+IN  C+ G   +A Q+   M    
Sbjct: 146 LMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIR 205

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +  YN++I+GLCK+G  D A  +  EM++ G+  D  +YN+++   C       A 
Sbjct: 206 VYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAV 265

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++  EM  RG V PD+ +F+ LI    + G++  A      M   G  PD V Y  ++NG
Sbjct: 266 KLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNG 325

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC +G V EA ++ D+M+E+  + +V++Y T++NG C+ +M+ EA  L  EM  + + PD
Sbjct: 326 YCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPD 385

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  L+ G  K G      +L + M       D++TYN L+D + K  + +KA  L+ 
Sbjct: 386 TVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQ 445

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +I   ISPN  +Y IL++G C  G +  A  ++  +  KG +P + + N +I G C+ G
Sbjct: 446 HIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEG 505

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
              +A+  L KMV+    P+ I+++T++   +
Sbjct: 506 FLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 226/423 (53%), Gaps = 1/423 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +  ++  A   L  + + G   D     TL+   C +G + EA  L++    +G
Sbjct: 111 LINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRG 170

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +     Y ++INGLCK G+   A ++  +M ++ + P+   YNT++   C++  + EA 
Sbjct: 171 FRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEAC 230

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV-PDNVLYTIIING 179
            +  EM   G+  D+ S++++I  F   G+   A+    EM   G V PD   + I+I+G
Sbjct: 231 GLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDG 290

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G V EA  +   M+++G   D+V+YN ++NG C +  + EA  +F++M+ER   P+
Sbjct: 291 LCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPN 350

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++ TLI+G+CK   +++A+ L   M  K++ PD VTYN L+DG  K G       L  
Sbjct: 351 VISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVE 410

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M +     + I+Y +L++ Y       +A  L+  ++  GI P + + N ++ G C+SG
Sbjct: 411 AMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSG 470

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A E    + ++G  P+  +YN +I+G  +E  +D+A AL+ KM N   +P+ IT++
Sbjct: 471 RLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFD 530

Query: 420 VIL 422
            I+
Sbjct: 531 TIV 533



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 1/211 (0%)

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           +N L+    K+        L+  + S+  I P+ I++ ILIN +  +G +  AF L   +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           +  G +  +    T++KG C  G   +A   L + V  G   D + Y T+ING  +    
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
             A  +  KM+   + P++I YN ++ G C+QG + ++  +   M+E G+  D  +Y ++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           I+G  S    + A +  DEM+ RG V  D +
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 42/78 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  AK     +  KG  P+  TYN +I+  C+EGFL+EA  L+  M    
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNN 521

Query: 61  LKPGVFTYNSLINGLCKK 78
             P   T+++++  +  K
Sbjct: 522 YLPNYITFDTIVRAILVK 539


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 256/484 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+   I   +  L  M +    P+   YN +INA C  G   +A    N M  +G
Sbjct: 272 IILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG 331

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+N++IN  CK+G    A+++ D + +MG SP+   YNTL+    +   + +A 
Sbjct: 332 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 391

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM ++G+APD ++F+ L+    + G+ +      +++   GL+PD  L+ I ++G 
Sbjct: 392 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 451

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA++   +MLEKG    ++ +N+++    +A +  +A + +  M+  G+ P  
Sbjct: 452 CWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 511

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T ++L+ G   +G + +A  L   M +K +  + + +  L+D F K G++  A  LW +
Sbjct: 512 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 571

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P+ +++   I+G    G V EA+ ++ EM+ KG+ P   + N++I G+C+ G 
Sbjct: 572 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +    M   G+ PD  + N +I G  ++  M  A  +   M   GL PD+ITYN 
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 691

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G+C+   M +++ ++ RM   G NPD +TY   I+G  S   +  A    DE++  G
Sbjct: 692 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 751

Query: 481 FVPD 484
            VP+
Sbjct: 752 IVPN 755



 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 252/460 (54%), Gaps = 1/460 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   K  +ID A M   EM +KG+ PD +T+N L++ + + G  E+  +L+  +S  G
Sbjct: 377 LMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG 436

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P    ++  ++GLC  GR D A E L +ML+ GLSP    +N+++    +     +A 
Sbjct: 437 LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAF 496

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E +  M   G+ P   + S+L+   S NG+L  A     +M   GL  +N+ +T++++ +
Sbjct: 497 EAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKF 556

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V+ A  +  EM  +G   DVV ++  ++GL +  ++ EA ++F EML +G+ P+ 
Sbjct: 557 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 616

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + +LI G CK G +N+AL L  +M  + + PDI T N +I G CK G M  A  ++ D
Sbjct: 617 FAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 676

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +SP+ I+Y  LINGYC    +  A  L   M   G  P L + N  I G+C S  
Sbjct: 677 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 736

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A   L ++VS G+ P++++YN+++NG V  + +D+A  L +++     VP+V+T N+
Sbjct: 737 MNRAVLMLDELVSAGIVPNTVTYNSMLNG-VCSDILDRAMILTARLLKMAFVPNVVTANL 795

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
           +L+ F +QG    + +   ++ E     D  TY  +   H
Sbjct: 796 LLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIMDKAH 835



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 256/499 (51%), Gaps = 38/499 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C   +   A  +   M ++G  P  VT+NT+INA+C+EG + EA +L + +   G
Sbjct: 307 VINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMG 366

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES---------- 110
             P    YN+L+NG  K    D+A  + +EM + G++PD  T+N L+             
Sbjct: 367 FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGD 426

Query: 111 -------------------------CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                                    C    + EA E   +M  +G++P I++F+++I  +
Sbjct: 427 RLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAY 486

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S+ G  D+A   ++ M   GL P     + ++ G   NG + EA ++  +M+EKG  ++ 
Sbjct: 487 SQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNN 546

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           + +  +L+   +   +  A  L+ EM  RG+FPD   F+  I G  K G + +A N+F  
Sbjct: 547 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLE 606

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +K + P+   YN+LI GFCK G++ +A KL   M  R + P+  +  ++I G C  G 
Sbjct: 607 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGR 666

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  ++ +M   G+ P +++ NT+I GYC++ D   AD  +++M + G +PD  +YN 
Sbjct: 667 MRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNI 726

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL-WRMIEK 444
            I+GF     M++A  ++ ++ + G+VP+ +TYN +L G C    + D  +IL  R+++ 
Sbjct: 727 RIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD--ILDRAMILTARLLKM 784

Query: 445 GLNPDRSTYTTLINGHVSQ 463
              P+  T   L++    Q
Sbjct: 785 AFVPNVVTANLLLSQFYKQ 803



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 252/462 (54%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           ++G  P   T++ +I  +CR+G +     L++ M     +P  F YN +IN  C +GR  
Sbjct: 259 RRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTS 318

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A    + M++ G +P   T+NT++   C++ N+ EA ++F  +   G +P+ + ++TL+
Sbjct: 319 DALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLM 378

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             + +  ++D+A M + EM+  G+ PD + + I+++G+ + G   +  ++  ++   G +
Sbjct: 379 NGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLL 438

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D   ++  ++GLC A  L EA +   +MLE+G+ P    F ++I  + + G  +KA   
Sbjct: 439 PDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEA 498

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           + +M    + P   T ++L+ G    G +++A +L   MI + +S N +++ +L++ +  
Sbjct: 499 YKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFK 558

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V  A  LW EM  +GI P +V+ +  I G  + G   +A     +M+ +G+ P++ +
Sbjct: 559 RGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFA 618

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN+LI GF +   +++A  L   M ++GL+PD+ T N+I+ G C+QGRM  +  +   M 
Sbjct: 619 YNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH 678

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + GL+PD  TY TLING+    ++  A    + M   G  PD
Sbjct: 679 QTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPD 720



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 230/456 (50%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D    ++L+ A+       +A +++  M   G++P       L   L + G      ++ 
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            ++++ G  P   T++ +++  CRK  +   E +   M +    P+  +++ +I      
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+   AL +F  M   G  P  V +  +IN +C+ G V+EA K+ D + E G   + + Y
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           NT++NG  + + + +A+ L+ EM ++G+ PD  TF  L+ GH K G       L   ++ 
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PD   ++  + G C  G +++A +   DM+ + +SP+ I++  +I  Y   G   +
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           AF  +  MV  G+ P+  +C++++ G   +G   +A E + +M+ +G+  +++++  L++
Sbjct: 495 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 554

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
            F +  ++  A +L  +ME +G+ PDV+ ++  + G  +QG + ++  +   M+ KGL P
Sbjct: 555 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIP 614

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   Y +LI G      L EA +    M  RG +PD
Sbjct: 615 NNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPD 650



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 230/467 (49%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           L  M + GV P       L     R G     ++L   +  +G +P  +T++ +I G C+
Sbjct: 219 LGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCR 278

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           KG     + +L  M +    P+   YN ++   C +   S+A   F  M  RG  P +V+
Sbjct: 279 KGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVT 338

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           F+T+I  F + G +  A   F  +K  G  P+ ++Y  ++NGY +   + +A  + +EM 
Sbjct: 339 FNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 398

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           +KG   D +T+N +++G  +     + D L  ++   G+ PD   F   + G C  G ++
Sbjct: 399 KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLD 458

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A+     M +K + P I+ +N++I  + + G  +KA + +  M+   ++P+  +   L+
Sbjct: 459 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 518

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
            G    G + EA  L  +M+ KG+    ++   ++  + + GD   A     +M   G+ 
Sbjct: 519 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF 578

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD ++++  I+G  ++  +++A+ +  +M  +GL+P+   YN ++ GFC+ G+++++  +
Sbjct: 579 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 638

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              M  +GL PD  T   +I G   Q  ++ A     +M Q G  PD
Sbjct: 639 EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPD 685


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 236/453 (52%), Gaps = 8/453 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD  T   LI      G   EA +++ +       P V  YN+++ G C  G+ D A+  
Sbjct: 96  PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMMAGYCGAGQVDAARRW 150

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             E     +  D  T +TL+   C +   + A  +  EM RR   PD+V+++ L+    +
Sbjct: 151 CAER---AVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 207

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
                +A+    EM+  G  PD V Y +++NG C+ G V +A++    +   GC  + V+
Sbjct: 208 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 267

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN +L GLC A+   +A++L  EM ++G  P+  TF  LI   C+ G +  AL + + + 
Sbjct: 268 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 327

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +    P+ ++YN L+  FCK  +M+KA      M+SR   P+ +SY  L+   C  G V 
Sbjct: 328 KYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 387

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  L +++  KG  P L+S NT+I G  ++G   +A E L++MVS+G+ PD I+Y+T+ 
Sbjct: 388 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 447

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  RE+ ++ A     K+++ G+ P+ + YN I+ G C++   H +  +   MI  G  
Sbjct: 448 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 507

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           P+ STYT LI G   +  +KEA    DE+  RG
Sbjct: 508 PNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 202/375 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +  +A   L EM ++   PD VTY  L+ A C+    ++A +L++ M  KG
Sbjct: 166 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 225

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN ++NG+C++GR D A E L  +   G  P+T +YN +L   C  E   +AE
Sbjct: 226 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 285

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM ++G  P++V+F+ LI    R G ++ AL    ++   G  P+++ Y  +++ +
Sbjct: 286 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAF 345

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A+   D M+ +GC  D+V+YNT+L  LCR+  +  A +L +++ ++G  P  
Sbjct: 346 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 405

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ T+I G  K G   +AL L + M  K ++PDI+TY+T+  G C+   +E A + +  
Sbjct: 406 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 465

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    I PN + Y  +I G C       A  L+  M+G G  P   +   +I+G    G 
Sbjct: 466 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 525

Query: 361 ASKADEFLSKMVSEG 375
             +A + L ++ S G
Sbjct: 526 IKEARDLLDELCSRG 540



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 211/410 (51%), Gaps = 3/410 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C   ++D+A+ +  E   + V  D  T +TLI   C  G    A  +++ M  + 
Sbjct: 134 MMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRR 190

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  L+   CK+    +A ++LDEM   G +PD  TYN ++   C++  + +A 
Sbjct: 191 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 250

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E    +   G  P+ VS++ ++       + + A     EM   G  P+ V + ++I+  
Sbjct: 251 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 310

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V  AL++ +++ + GC  + ++YN +L+  C+ K + +A    + M+ RG +PD 
Sbjct: 311 CRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 370

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TL+   C+ G ++ A+ L   +  K   P +++YNT+IDG  K G+ ++A +L  +
Sbjct: 371 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 430

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S+ + P+ I+Y  +  G C    + +A R + ++   GI+P  V  N II G C+  +
Sbjct: 431 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 490

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
              A +  + M+  G  P+  +Y  LI G   E  + +A  L+ ++ ++G
Sbjct: 491 THSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 264/486 (54%), Gaps = 6/486 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A C+   +D AK  +  M+ +G     V YN LI   C+   + EA  + NSM  +G+
Sbjct: 204 IRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGV 263

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
                T  +L+ G C+    D A E+  +M ++G  P  A  + +L    +K  + EA  
Sbjct: 264 AADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFR 323

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           + C++    + P+I +++ L+    +NG    A     EM   GL P+ V Y I+I+  C
Sbjct: 324 LACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLC 383

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G + +AL M D M EKG  M V  YN+++N  C+   L  A    +EM+E G+ P+  
Sbjct: 384 KRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAA 443

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           +++ +I G C+ G+++ A+ L   M +K +  +  T+  LI+GFCK  +M++A++L+  M
Sbjct: 444 SYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKM 503

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
               + PN +++  +I GYC +G + +AF+L+ +M+ +G+ P   +  ++I G C +  A
Sbjct: 504 TESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGA 563

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           SKA EF++ + +     +  S   L++GF RE  + +A+ + ++M   G   D+I++ +I
Sbjct: 564 SKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTII 623

Query: 422 LTGFCRQGRMHDSE--LILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           +    +Q   HDSE   +L+R M EKG+ PD   +T +IN +  + N+ +A    DEM+ 
Sbjct: 624 VYAALKQ---HDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIA 680

Query: 479 RGFVPD 484
            G +P+
Sbjct: 681 DGHLPN 686



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 250/484 (51%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+  ++D A     +M + G  P     + +++   ++G +EEAF+L   +    
Sbjct: 273 LVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELR 332

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +F YN+L+N +CK G    A  +++EM   GL P+  TY  L+   C++  M +A 
Sbjct: 333 MVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDAL 392

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +GV   +  +++LI    +   LD A+ +  EM   GL P+   Y+ +I G 
Sbjct: 393 CMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGL 452

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A+++  +M EKG   +  T+  ++NG C+AK + EA  LFN+M E  + P+ 
Sbjct: 453 CRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNE 512

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  +I G+C  G++ KA  L+D M  + + PD  TY +LI G C      KA +  AD
Sbjct: 513 VTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVAD 572

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +     N  S   L++G+C  G +TEA+ +W EM   G K  L+S   I+    +  D
Sbjct: 573 LENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHD 632

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + K+     +M  +GV PD++ +  +IN + +E NM +A     +M   G +P+ +TY  
Sbjct: 633 SEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTA 692

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C+   +  +EL+   M+     P+  T+   ++   ++ NL+ A   +  MLQ G
Sbjct: 693 LVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-G 751

Query: 481 FVPD 484
           F+ +
Sbjct: 752 FLAN 755



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 264/519 (50%), Gaps = 36/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N +CK+     A   + EM  KG+ P+ VTY  LI++ C+ G +++A  +++ M  KG
Sbjct: 343 LLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKG 402

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V+ YNSLIN  CKK   D A   L EM+++GL+P+ A+Y+ ++   CRK ++S A 
Sbjct: 403 VRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAV 462

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M+ +GVA +  +F+ LI  F +  ++D A   F +M  + L P+ V +  +I GY
Sbjct: 463 ELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGY 522

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC------------------------ 216
           C  G + +A ++ D+M+ +G   D  TY ++++GLC                        
Sbjct: 523 CLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNK 582

Query: 217 -----------RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                      R   LTEA  ++NEM   G   D  +FT +++   K  +  K+  LF  
Sbjct: 583 FSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFRE 642

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +K ++PD V +  +I+ + K G M +A   W +MI+    PN ++Y  L+N  C   H
Sbjct: 643 MKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWH 702

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           ++ A  L  EM+     P   + N  +  +   G+   A +    M+ +G   + +S NT
Sbjct: 703 LSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAML-QGFLANIVSVNT 761

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI GF +   + +A  L+S+    G  PD I+Y+ ++   C++G ++++  +   M+ KG
Sbjct: 762 LIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKG 821

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + PD   Y  LI          +    + +M+++G  P+
Sbjct: 822 VKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPN 860



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/419 (33%), Positives = 228/419 (54%), Gaps = 19/419 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  K+D A     +M +  + P+ VT+N +I  YC  G + +AFQL + M  +G
Sbjct: 483 LINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRG 542

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +TY SLI+GLC      +AKE + ++       +  +   LL   CR+  ++EA 
Sbjct: 543 LTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAY 602

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+  G   D++SF+ ++    +    +++ + FREMK  G+ PDNV +T +IN Y
Sbjct: 603 HVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMY 662

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +++AL   DEM+  G + + VTY  ++N LC++  L+ A+ L  EML     P+ 
Sbjct: 663 SKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNS 722

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF   +     +GN+  A +L+  M Q  +  +IV+ NTLI GFCKVG++++A     D
Sbjct: 723 YTFNCFLDYFATEGNLETAKDLYFAMLQGFLA-NIVSVNTLIKGFCKVGQIQEA----ID 777

Query: 301 MISRKIS----PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +ISR       P+ ISY  +I+  C  G + EA  LW EM+ KG+KP +V+ N +I+   
Sbjct: 778 LISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCN 837

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
             G++ K       MV +GV P+  ++  L  G           +L+SK     L+PDV
Sbjct: 838 IHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG----------TSLMSKGNTLMLIPDV 886



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 203/399 (50%)

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           VL   L  G++PD  T + +L    +    + A  +F  M   GV  D   ++  I  + 
Sbjct: 149 VLHLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYC 208

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
               LD A      M+  G     V Y ++I G C+N  V EA+ +++ ML +G   D V
Sbjct: 209 EVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEV 268

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T  T++ G CR + L  A ++  +M   G  P     + ++ G  K G + +A  L   +
Sbjct: 269 TCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQL 328

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            +  + P+I  YN L++  CK G   +A++L  +M  + + PN ++Y ILI+  C  G +
Sbjct: 329 GELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMM 388

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A  +   M  KG++ T+   N++I   C+  D   A  FLS+MV  G+ P++ SY+ +
Sbjct: 389 DDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPV 448

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G  R+ ++  A  L  KM  +G+  +  T+  ++ GFC+  +M ++  +  +M E  L
Sbjct: 449 IAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNL 508

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            P+  T+  +I G+    ++++AF+ +D+M+ RG  PD+
Sbjct: 509 EPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDN 547



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 198/413 (47%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P   T + ++  L K  +   A+ + D ML  G+  D   Y   +   C   N+  A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +   M   G     V ++ LI    +N ++  A+     M + G+  D V    ++ G
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR   +  AL+M  +M   G V      + +L+GL +   + EA  L  ++ E  + P+
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            + +  L++  CK+G  ++A  L + M+ K ++P+ VTY  LI   CK G M+ A  +  
Sbjct: 337 IFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLD 396

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  + +      Y  LIN  C    +  A     EMV  G+ P   S + +I G CR G
Sbjct: 397 RMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKG 456

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D S A E   KM  +GV  ++ ++  LINGF + + MD+A  L +KM    L P+ +T+N
Sbjct: 457 DLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFN 516

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            ++ G+C  G +  +  +  +M+ +GL PD  TY +LI+G    +   +A  F
Sbjct: 517 AVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEF 569



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 143/290 (49%)

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           L  G   D  T + IL  L + +    A  LF+ ML  GV  D Y +T  I  +C+  N+
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A  L   M  +  K   V YN LI G CK   + +A  +   M++R ++ + ++   L
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTL 273

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + G+C    +  A  +  +M   G  P+  +C+ ++ G  + G   +A     ++    +
Sbjct: 274 VYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM 333

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+  +YN L+N   +     +A  LV++M ++GL P+ +TY +++   C++G M D+  
Sbjct: 334 VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALC 393

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +L RM EKG+      Y +LIN    +++L  A  F  EM++ G  P+ A
Sbjct: 394 MLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAA 443


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 148/457 (32%), Positives = 244/457 (53%), Gaps = 15/457 (3%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +  ++++  +         L   +   G+KP + + + LIN  C  G+   A  +
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++L+MG  P+T T  TL+   C    + EA      +   G   + VS+ TLI    +
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+   AL   R+++   +  D V+Y+ II+G C++  V +A ++  EM+ K     VVT
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
            N+++ G C      EA  L  EM+ + + PD YTF  L+   CK+G + +A +   +M 
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ + PD+VTY++L+DG+C V E+ KA  +               Y I+ING+C +  V 
Sbjct: 309 KEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---------------YSIVINGFCKIKMVD 353

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+YEM  + I P  V+ N++I G C+SG  S A E + +M   G   D I+YN+LI
Sbjct: 354 KALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLI 413

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +  ++DKA ALV K+++QG+  D+ TYN+++ G C+QGR+ D+++I   ++ KG N
Sbjct: 414 DALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYN 473

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
               TYT +ING   +  L EA     +M   G VPD
Sbjct: 474 LTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPD 510



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 233/463 (50%), Gaps = 15/463 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           ++E  G+ P+ V+ + LIN YC  G +  AF +   +   G  P   T  +L+ G C   
Sbjct: 96  QLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNH 155

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A    D +L +G   +  +Y TL+   C+      A ++  ++  + V+ D+V +S
Sbjct: 156 KVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYS 215

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++  ++ A   + EM +  + P  V    +I GYC  G   EA  +  EM+ K
Sbjct: 216 TIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLK 275

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               DV T+N +++ LC+   + EA      M++ GV PD  T+++L+ G+C    +NKA
Sbjct: 276 NINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKA 335

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            +++ I+               I+GFCK+  ++KA  L+ +M  R+I+P+ ++Y  LI+G
Sbjct: 336 KHVYSIV---------------INGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDG 380

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G ++ A+ L  EM   G    +++ N++I   C++    KA   + K+  +G+  D
Sbjct: 381 LCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLD 440

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN LI+G  ++  +  A  +   +  +G    V TY +++ G C +G ++++E +L 
Sbjct: 441 MYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLS 500

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +M + G  PD  T  T+I      +  + A +   EM+ RG +
Sbjct: 501 KMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 210/412 (50%), Gaps = 15/412 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C +HK+  A  F   +   G + + V+Y TLIN  C+ G    A Q++  + GK 
Sbjct: 147 LVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKL 206

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V  Y+++I+GLCK    + A E+  EM+   +SP   T N+L+   C      EA 
Sbjct: 207 VSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAF 266

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  + + PD+ +F+ L+    + G++  A      M   G++PD V Y+ +++GY
Sbjct: 267 GLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGY 326

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V E  K +              Y+ ++NG C+ KM+ +A  LF EM  R + PD 
Sbjct: 327 C---LVNEVNKAKH------------VYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDT 371

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G CK G ++ A  L D M       DI+TYN+LID  CK   ++KA  L   
Sbjct: 372 VTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKK 431

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + I  +  +Y ILI+G C  G + +A  ++ +++ KG   T+ +   +I G C  G 
Sbjct: 432 IKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGL 491

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            ++A+  LSKM   G  PD+++  T+I      +  ++A  L+ +M  +GL+
Sbjct: 492 LNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 135/265 (50%), Gaps = 3/265 (1%)

Query: 223 EADDL---FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
             DDL   F+ ML     P    F  ++    K  +    ++LF  +    IKP+IV+ +
Sbjct: 51  HVDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLS 110

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
            LI+ +C +G+M  A  ++A ++     PN I+   L+ G+C    V EA      ++  
Sbjct: 111 ILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLAL 170

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           G     VS  T+I G C+ G+   A + L ++  + V  D + Y+T+I+G  +++ ++ A
Sbjct: 171 GFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDA 230

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           + L S+M  + + P V+T N ++ G+C  G+  ++  +L  M+ K +NPD  T+  L++ 
Sbjct: 231 YELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDA 290

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
              +  +KEA      M++ G +PD
Sbjct: 291 LCKEGKIKEAKSGIAVMMKEGVMPD 315


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 138/419 (32%), Positives = 236/419 (56%), Gaps = 1/419 (0%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y  +IN   +    D +    +EM+  G  P +  +N LL       + ++    F E S
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-S 155

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           +  V  D+ SF  +I      G+++++     E++  G  P+ V+YT +I+G C+ G + 
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           +A  +  EM + G V +  TY  +++GL +  +  +  +++ +M E GVFP+ YT+  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           + HCKDG    A  LFD M ++ +  +IVTYNTLI G C+  +  +ANK+   M S  I+
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN I+Y  LI+G+C +G + +A  L  ++  +G+ P+LV+ N ++ G+C+ GD S A + 
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           + +M   G+ P  I+Y  LI+ F R +NM+KA  L S ME  GL PDV TY+V++ GFC 
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +G+M+++  +   M+ K L P++  Y T++ G+  + +   A R   EM ++   P+ A
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 259/469 (55%), Gaps = 5/469 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+NA  +   +DS+  +  EM  KG  P +  +N L+          + ++  N    K 
Sbjct: 100 MINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK- 158

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V+++  +I G C+ G  +++ ++L E+ + G SP+   Y TL+   C++  + +A+
Sbjct: 159 VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAK 218

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM + G+  +  +++ LI    +NG   +    + +M+  G+ P+   Y  ++N +
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQH 278

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G   +A K+ DEM E+G   ++VTYNT++ GLCR     EA+ + ++M   G+ P+ 
Sbjct: 279 CKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNL 338

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G C  G + KAL+L   +  + + P +VTYN L+ GFCK G+   A K+  +
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P+ I+Y ILI+ +  M ++ +A +L   M   G+ P + + + +I G+C  G 
Sbjct: 399 MEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ 458

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A      MV++ ++P+ + YNT++ G+ +E +  +A  L  +ME + L P+V +Y  
Sbjct: 459 MNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI----NGHVSQNN 465
           ++   C++ +  ++E ++ +MI+ G++P  S    +     + HVS NN
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRAKNDSHVSSNN 567



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 247/454 (54%), Gaps = 1/454 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           Y  +INAY +   L+ +    N M  KG  PG   +N+L+  +      ++     +E  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNES- 155

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           ++ +  D  ++  ++   C    + ++ ++  E+   G +P++V ++TLI    + G+++
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           +A   F EM   GLV +   YT++I+G  +NG   +  +M ++M E G   ++ TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           N  C+     +A  LF+EM ERGV  +  T+ TLI G C++   N+A  + D M    I 
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+++TYNTLIDGFC VG++ KA  L  D+ SR +SP+ ++Y IL++G+C  G  + A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             EM  +GIKP+ ++   +I  + R  +  KA +  S M   G+ PD  +Y+ LI+GF  
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +  M++A  L   M  + L P+ + YN ++ G+C++G  + +  +   M EK L P+ ++
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           Y  +I     +   KEA    ++M+  G  P D+
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDS 549



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 203/365 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  +I+ AK    EM + G+  +  TY  LI+   + G  ++ F++   M   G
Sbjct: 204 LIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P ++TYN ++N  CK GR   A ++ DEM + G+S +  TYNTL+   CR+   +EA 
Sbjct: 264 VFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M   G+ P++++++TLI  F   G+L +AL   R++KS GL P  V Y I+++G+
Sbjct: 324 KVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A K+  EM E+G     +TY  +++   R   + +A  L + M E G+ PD 
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDV 443

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LIHG C  G MN+A  LF +M  K ++P+ V YNT++ G+CK G   +A +L+ +
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFRE 503

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +++ PN  SY  +I   C      EA  L  +M+  GI P+    N I +    S  
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRAKNDSHV 563

Query: 361 ASKAD 365
           +S  D
Sbjct: 564 SSNND 568



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 186/347 (53%), Gaps = 34/347 (9%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCV----------------------------- 202
           LY ++IN Y ++  +  ++   +EM++KG V                             
Sbjct: 96  LYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNES 155

Query: 203 -----MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
                +DV ++  ++ G C A  + ++ DL  E+ E G  P+   +TTLI G CK G + 
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           KA +LF  M +  +  +  TY  LI G  K G  ++  +++  M    + PN  +Y  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           N +C  G   +AF+L+ EM  +G+   +V+ NT+I G CR   A++A++ + +M S+G++
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+ I+YNTLI+GF     + KA +L   ++++GL P ++TYN++++GFC++G    +  +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  M E+G+ P + TYT LI+     +N+++A +    M + G  PD
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPD 442



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 140/318 (44%), Gaps = 54/318 (16%)

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIH--------------------GHCKDGNMNKA 259
           + + A  L  +++   +   F+T ++L+H                     + +  +++ +
Sbjct: 54  LYSHAQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSS 113

Query: 260 LNLFDIMTQKSIKP----------------------------------DIVTYNTLIDGF 285
           ++ F+ M  K   P                                  D+ ++  +I G 
Sbjct: 114 ISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGC 173

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C+ GE+EK+  L  ++     SPN + Y  LI+G C  G + +A  L++EM   G+    
Sbjct: 174 CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANE 233

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            +   +I G  ++G   +  E   KM  +GV P+  +YN ++N   ++     AF L  +
Sbjct: 234 WTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDE 293

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  +G+  +++TYN ++ G CR+ + +++  ++ +M   G+NP+  TY TLI+G      
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 466 LKEAFRFHDEMLQRGFVP 483
           L +A     ++  RG  P
Sbjct: 354 LGKALSLCRDLKSRGLSP 371



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 34/147 (23%)

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP------------------- 413
           SE  +  S  Y  +IN +V+ +++D + +  ++M ++G VP                   
Sbjct: 87  SETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFN 146

Query: 414 ---------------DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
                          DV ++ +++ G C  G +  S  +L  + E G +P+   YTTLI+
Sbjct: 147 QWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLID 206

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G   +  +++A     EM + G V ++
Sbjct: 207 GCCKRGEIEKAKDLFFEMGKFGLVANE 233


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 245/452 (54%), Gaps = 8/452 (1%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V+AL K  +++ A ++F          P+ VTY T+IN  C++G L+ A +L++ M+  
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNET 165

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P V TY+ L+ GLCK GR D+   +L EM + G  PD   YNTLL   C+   + EA
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEA 225

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M R G  P +V++++L+ +F R+ Q+DRA    + M   G  PD + Y  +I G
Sbjct: 226 LELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM------LTEADDLFNEMLE 233
            CR+  + +A  +  +M+   CV DV+TY+TI++GLC+         L  A ++   M +
Sbjct: 286 LCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQ 345

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G  P+  T+  +I G C+     +AL L   M    + PD+ +++ +I   CK  +++ 
Sbjct: 346 TGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDA 405

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A K++  M  R+  PN ++Y  LI+G    G V +A R+ +E++ +  +P + + N+++ 
Sbjct: 406 AYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV-FELMVESFRPGVATYNSVLD 464

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G C  G   +A   +  M+ +   PD  SY  LI G  R   +++A+ L   +E +G   
Sbjct: 465 GLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAM 524

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +V  YNV++   C++ R+ D+  +  ++IE G
Sbjct: 525 EVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 241/488 (49%), Gaps = 8/488 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K+D A   L EM  +G+ P    +N +I   C+ G   +A     +++G  
Sbjct: 36  LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTK 95

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKENMSEA 119
             P + T+N L++ L K GR + A ++ + M       P+  TY T++   C+   +  A
Sbjct: 96  CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M+  G  P+++++S L+    + G+ D+     +EM   G  PD ++Y  ++NG
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C++  + EAL++   M+  GC   VVTYN+++   CR+K +  A  L   M ERG  PD
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK------VGEMEK 293
              + T+I G C+D  ++ A  L   M      PD++TY+T+IDG CK        ++E 
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A ++   M      PN  +Y ++I G C      +A  L   M+   + P L S + +I 
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C+S D   A +    M      P+ ++Y  LI+G  +   +DKA  +   M  +   P
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRP 454

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
            V TYN +L G C  GR+ ++  ++  MI K   PD ++Y  LI G    + ++EA+   
Sbjct: 455 GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514

Query: 474 DEMLQRGF 481
             +  +GF
Sbjct: 515 QAVEAKGF 522



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 245/466 (52%), Gaps = 8/466 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  TY +LI+  C+ G L++A++L++ M  +G+ PGV  +N +I GLCK GR   A   
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVSFSTLIGIFS 146
              +     +PD  T+N L+    +   + EA +IF  M +     P++V+++T+I    
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           ++G+LDRA+     M   G  P+ + Y++++ G C+ G   +   +  EM  +G   DV+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            YNT+LNGLC+++ L EA +L   M+  G +P   T+ +L+   C+   +++A  L  +M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
           +++   PD++ YNT+I G C+   ++ A  L   M++ +  P+ I+Y  +I+G C    V
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 327 TEAFRL-----WYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              ++L       EM+ + G  P   +   +I+G CR+  + +A   L +M+   V PD 
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            S++ +I    +  ++D A+ +   M  +   P+ + Y  ++ G  + G +  +  +   
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           M+E    P  +TY ++++G      ++EA R  + M+ +   PD A
Sbjct: 448 MVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492



 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 249/488 (51%), Gaps = 8/488 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++  LCK  +   A  +   +      PD +T+N L++A  + G +EEAFQ+  SM +  
Sbjct: 71  VIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSS 130

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P V TY ++INGLCK G+ DRA E+LD M + G  P+  TY+ L+   C+     + 
Sbjct: 131 QCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKG 190

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM+RRG  PD++ ++TL+    ++ +LD AL   + M  +G  P  V Y  ++  
Sbjct: 191 FTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL 250

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR+  V  A ++   M E+GC  DV+ YNT++ GLCR   L +A  L  +M+     PD
Sbjct: 251 FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310

Query: 240 FYTFTTLIHGHCKDGNMNK------ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
             T++T+I G CKD  ++       A  + ++M Q    P+  TY  +I+G C+  + ++
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L   MI  ++ P+  S+ ++I   C    +  A++++  M  +  KP  V+   +I 
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G  + G+  KA      MV E   P   +YN++++G      +++A  +V  M ++   P
Sbjct: 431 GLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D  +Y  ++ G CR   + ++  +   +  KG   +   Y  L+N    +  L +A    
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVA 549

Query: 474 DEMLQRGF 481
           +++++ G+
Sbjct: 550 NKLIEAGY 557



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 237/452 (52%), Gaps = 10/452 (2%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N  +N   R G   +A QL      +   P  FTY SLI+GLCK G+ D+A E+LDEM  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            G+ P  A +N ++   C+     +A   F  ++     PDI++F+ L+    ++G+++ 
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 154 ALMYFREMK-SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           A   F  M  S+  +P+ V YT +ING C++G +  A+++ D M E GC  +V+TY+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            GLC+A    +   L  EM  RG  PD   + TL++G CK   +++AL L  +M +    
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P +VTYN+L++ FC+  ++++A +L   M  R   P+ I+Y  +I G C    + +A  L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSG--DA----SKADEFLSKMVSEGVDPDSISYNTL 386
             +MV     P +++ +TII G C+    DA      A E L  M   G  P++ +Y  +
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G  R     +A AL+ +M +  +VPD+ ++++++   C+   +  +  I   M E+  
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            P+   Y  LI+G      + +A R  + M++
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 199/418 (47%), Gaps = 77/418 (18%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCKD K+D A   L  M + G  P+ +TY+ L+   C+ G  ++ F L+  M+ +G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN+L+NGLCK  R D A E++  M++ G  P   TYN+L+   CR + +  A 
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   MS RG  PD+++++T+I    R+ +LD A    ++M +A  VPD + Y+ II+G 
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 181 CRNGFV-----LEA-LKMRDEMLEKGCVMDVVTYNTILNGLCRAKM-------------- 220
           C++  V     LEA  ++ + M + GC  +  TY  ++ GLCRA+               
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 221 ---------------------LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
                                L  A  +F  M ER   P+   +  LI G  K G ++KA
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441

Query: 260 LNLFDIMTQKSIKPDIVTYNTLID-----------------------------------G 284
           + +F++M + S +P + TYN+++D                                   G
Sbjct: 442 VRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            C+V  +E+A +L+  + ++  +     Y +L+N  C    +++A  +  +++  G K
Sbjct: 501 LCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 1/288 (0%)

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           E+ CV +  TY ++++GLC+A  L +A +L +EM +RG+ P       +I G CK G   
Sbjct: 23  EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFG 82

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM-ISRKISPNYISYGIL 316
            AL  F  +      PDI+T+N L+D   K G +E+A +++  M  S +  PN ++Y  +
Sbjct: 83  DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ING C  G +  A  L   M   G  P +++ + +++G C++G   K    L +M   G 
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD I YNTL+NG  +   +D+A  LV  M   G  P V+TYN ++  FCR  ++  +  
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  M E+G  PD   Y T+I G      L +A     +M+    VPD
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 245/452 (54%), Gaps = 8/452 (1%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V+AL K  +++ A ++F          P+ VTY T+IN  C++G L+ A +L++ M+  
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNET 165

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G  P V TY+ L+ GLCK GR D+   +L EM + G  PD   YNTLL   C+   + EA
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEA 225

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M R G  P +V++++L+ +F R+ Q+DRA    + M   G  PD + Y  +I G
Sbjct: 226 LELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM------LTEADDLFNEMLE 233
            CR+  + +A  +  +M+   CV DV+TY+TI++GLC+         L  A ++   M +
Sbjct: 286 LCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQ 345

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G  P+  T+  +I G C+     +AL L   M    + PD+ +++ +I   CK  +++ 
Sbjct: 346 TGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDA 405

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A K++  M  R+  PN ++Y  LI+G    G V +A R+ +E++ +  +P + + N+++ 
Sbjct: 406 AYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV-FELMVESFRPGVATYNSVLD 464

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G C  G   +A   +  M+ +   PD  SY  LI G  R   +++A+ L   +E +G   
Sbjct: 465 GLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAM 524

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +V  YNV++   C++ R+ D+  +  ++IE G
Sbjct: 525 EVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 241/488 (49%), Gaps = 8/488 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K+D A   L EM  +G+ P    +N +I   C+ G   +A     +++G  
Sbjct: 36  LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTK 95

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLS-PDTATYNTLLVESCRKENMSEA 119
             P + T+N L++ L K GR + A ++ + M       P+  TY T++   C+   +  A
Sbjct: 96  CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M+  G  P+++++S L+    + G+ D+     +EM   G  PD ++Y  ++NG
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C++  + EAL++   M+  GC   VVTYN+++   CR+K +  A  L   M ERG  PD
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK------VGEMEK 293
              + T+I G C+D  ++ A  L   M      PD++TY+T+IDG CK        ++E 
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A ++   M      PN  +Y ++I G C      +A  L   M+   + P L S + +I 
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
             C+S D   A +    M      P+ ++Y  LI+G  +   +DKA  +   M  +   P
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRP 454

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
            V TYN +L G C  GR+ ++  ++  MI K   PD ++Y  LI G    + ++EA+   
Sbjct: 455 GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514

Query: 474 DEMLQRGF 481
             +  +GF
Sbjct: 515 QAVEAKGF 522



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 245/466 (52%), Gaps = 8/466 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  TY +LI+  C+ G L++A++L++ M  +G+ PGV  +N +I GLCK GR   A   
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVSFSTLIGIFS 146
              +     +PD  T+N L+    +   + EA +IF  M +     P++V+++T+I    
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           ++G+LDRA+     M   G  P+ + Y++++ G C+ G   +   +  EM  +G   DV+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            YNT+LNGLC+++ L EA +L   M+  G +P   T+ +L+   C+   +++A  L  +M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
           +++   PD++ YNT+I G C+   ++ A  L   M++ +  P+ I+Y  +I+G C    V
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 327 TEAFRL-----WYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              ++L       EM+ + G  P   +   +I+G CR+  + +A   L +M+   V PD 
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            S++ +I    +  ++D A+ +   M  +   P+ + Y  ++ G  + G +  +  +   
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           M+E    P  +TY ++++G      ++EA R  + M+ +   PD A
Sbjct: 448 MVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492



 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 249/488 (51%), Gaps = 8/488 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++  LCK  +   A  +   +      PD +T+N L++A  + G +EEAFQ+  SM +  
Sbjct: 71  VIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSS 130

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P V TY ++INGLCK G+ DRA E+LD M + G  P+  TY+ L+   C+     + 
Sbjct: 131 QCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKG 190

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM+RRG  PD++ ++TL+    ++ +LD AL   + M  +G  P  V Y  ++  
Sbjct: 191 FTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL 250

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR+  V  A ++   M E+GC  DV+ YNT++ GLCR   L +A  L  +M+     PD
Sbjct: 251 FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310

Query: 240 FYTFTTLIHGHCKDGNMNK------ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
             T++T+I G CKD  ++       A  + ++M Q    P+  TY  +I+G C+  + ++
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L   MI  ++ P+  S+ ++I   C    +  A++++  M  +  KP  V+   +I 
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G  + G+  KA      MV E   P   +YN++++G      +++A  +V  M ++   P
Sbjct: 431 GLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           D  +Y  ++ G CR   + ++  +   +  KG   +   Y  L+N    +  L +A    
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVA 549

Query: 474 DEMLQRGF 481
           +++++ G+
Sbjct: 550 NKLIEAGY 557



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 237/452 (52%), Gaps = 10/452 (2%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N  +N   R G   +A QL      +   P  FTY SLI+GLCK G+ D+A E+LDEM  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            G+ P  A +N ++   C+     +A   F  ++     PDI++F+ L+    ++G+++ 
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 154 ALMYFREMK-SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           A   F  M  S+  +P+ V YT +ING C++G +  A+++ D M E GC  +V+TY+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            GLC+A    +   L  EM  RG  PD   + TL++G CK   +++AL L  +M +    
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P +VTYN+L++ FC+  ++++A +L   M  R   P+ I+Y  +I G C    + +A  L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSG--DA----SKADEFLSKMVSEGVDPDSISYNTL 386
             +MV     P +++ +TII G C+    DA      A E L  M   G  P++ +Y  +
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G  R     +A AL+ +M +  +VPD+ ++++++   C+   +  +  I   M E+  
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            P+   Y  LI+G      + +A R  + M++
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 199/418 (47%), Gaps = 77/418 (18%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCKD K+D A   L  M + G  P+ +TY+ L+   C+ G  ++ F L+  M+ +G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN+L+NGLCK  R D A E++  M++ G  P   TYN+L+   CR + +  A 
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   MS RG  PD+++++T+I    R+ +LD A    ++M +A  VPD + Y+ II+G 
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 181 CRNGFV-----LEA-LKMRDEMLEKGCVMDVVTYNTILNGLCRAKM-------------- 220
           C++  V     LEA  ++ + M + GC  +  TY  ++ GLCRA+               
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 221 ---------------------LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
                                L  A  +F  M ER   P+   +  LI G  K G ++KA
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441

Query: 260 LNLFDIMTQKSIKPDIVTYNTLID-----------------------------------G 284
           + +F++M + S +P + TYN+++D                                   G
Sbjct: 442 VRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            C+V  +E+A +L+  + ++  +     Y +L+N  C    +++A  +  +++  G K
Sbjct: 501 LCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 1/288 (0%)

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           E+ CV +  TY ++++GLC+A  L +A +L +EM +RG+ P       +I G CK G   
Sbjct: 23  EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFG 82

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM-ISRKISPNYISYGIL 316
            AL  F  +      PDI+T+N L+D   K G +E+A +++  M  S +  PN ++Y  +
Sbjct: 83  DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ING C  G +  A  L   M   G  P +++ + +++G C++G   K    L +M   G 
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD I YNTL+NG  +   +D+A  LV  M   G  P V+TYN ++  FCR  ++  +  
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  M E+G  PD   Y T+I G      L +A     +M+    VPD
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 146/431 (33%), Positives = 244/431 (56%), Gaps = 4/431 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL---MNSMS 57
           +V+ALCKD K+  A      + + G++P+ VT+N +++  C+ G ++ A +L   M  MS
Sbjct: 244 VVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMS 303

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
              +KP   TYNSLI+G CK G    A+E+ +EM+++ + P+  TY T++    R   + 
Sbjct: 304 AGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLE 363

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA  +  EM  RG+ P+ V +++++      G +D A + F +M    +  D    +I+ 
Sbjct: 364 EALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILT 423

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G CRNG++  ALK  +++LE   + D  ++N ++N LC++     A  L   M  RG+ 
Sbjct: 424 RGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLV 483

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  TF TLI GHCK+GN+  A+ ++D M +   KP+++ YN++I+G CK G ++ A  L
Sbjct: 484 PDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSL 543

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             D++ R    + I+Y  LINGY + G   +AF+L   M   GI  +  + NT+IK  C+
Sbjct: 544 -VDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCK 602

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A E ++ MV  GV PD+I+Y TL+    +  + ++   L   M  +G+VPD +T
Sbjct: 603 FGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLT 662

Query: 418 YNVILTGFCRQ 428
           Y  I++   ++
Sbjct: 663 YENIVSPLLQE 673



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 245/468 (52%), Gaps = 4/468 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +++ +G +     +N  ++   +   +   + +   M   G    V T+N +++ LCK  
Sbjct: 193 KLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDC 252

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM---SRRGVAPDIV 136
           +   A  V   +L+ G+ P+  T+N ++  +C+  +M  A ++  +M   S   + P+ V
Sbjct: 253 KLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSV 312

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++++LI  F + G +  A     EM    + P+   Y  +I GY R G + EAL++ DEM
Sbjct: 313 TYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEM 372

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           +E+G + + V YN+I++ L     +  A  +F +M ++ +  D +T + L  G C++G +
Sbjct: 373 VERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYI 432

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
             AL   + + + ++  D  ++N LI+  CK      A +L A M  R + P+ +++G L
Sbjct: 433 TTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTL 492

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+G+C  G++  A +++ +MV    KP L+  N+II G C+ G    A   +  +   G+
Sbjct: 493 IDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGL 552

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
             D+I+YNTLING+      DKAF L + M+N G++    TYN ++   C+ G + +++ 
Sbjct: 553 -VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKE 611

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  M+  G+ PD  TY TL+       + +E    HD M+ +G VPD
Sbjct: 612 LMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPD 659



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 241/485 (49%), Gaps = 21/485 (4%)

Query: 22  EQKGVYPDTVTYNTLINAYCREGFLEEAFQLM-NSMSGKGLKP-----------GV---- 65
           E+K V        ++I+        ++A  LM N M+  GL P           G+    
Sbjct: 108 EKKSVLHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEVLEALNNSYGICESN 167

Query: 66  -FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
              +++L+    + G    A EV+ ++   G       +N  L    +   +     ++ 
Sbjct: 168 HAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYK 227

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM   G   ++ +F+ ++    ++ +L  AL  F  +  +G+ P+ V + ++++G C+ G
Sbjct: 228 EMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMG 287

Query: 185 FVLEALKM--RDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
            +  ALK+  + E++  G +  + VTYN++++G C+   +T A++L NEM++  + P+  
Sbjct: 288 DMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVR 347

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+ T+I G+ + G + +AL L D M ++ + P+ V YN+++      G+++ A+ ++ DM
Sbjct: 348 TYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDM 407

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             ++I  +  +  IL  G C  G++T A +   +++   +     S N +I   C+S + 
Sbjct: 408 SDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNF 467

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           + A + L++M   G+ PD +++ TLI+G  +E N++ A  +  KM      P+++ YN I
Sbjct: 468 AAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSI 527

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + G C+ G +  +  ++  +   GL  D  TY TLING+ +     +AF+    M   G 
Sbjct: 528 INGLCKDGLVDVARSLVDVLQRMGL-VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGI 586

Query: 482 VPDDA 486
           +   A
Sbjct: 587 LASSA 591



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 120/222 (54%), Gaps = 1/222 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK +   +A+  L  M  +G+ PD VT+ TLI+ +C+EG +E A Q+ + M    
Sbjct: 457 LINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGE 516

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP +  YNS+INGLCK G  D A+ ++D + +MGL  DT TYNTL+          +A 
Sbjct: 517 EKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV-DTITYNTLINGYFNCGKFDKAF 575

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M   G+     +++T+I    + G +  A      M   G++PDN+ Y  ++   
Sbjct: 576 KLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVINI 635

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
            +N    E +++ D M+ KG V D +TY  I++ L + +  T
Sbjct: 636 NKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQEESAT 677



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 137/267 (51%), Gaps = 4/267 (1%)

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A ++  ++   G +   + +   +    K   +++   ++  M       ++ T+N ++ 
Sbjct: 187 ACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVH 246

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE---MVGKG 340
             CK  ++++A  ++  ++   I PN +++ ++++G C MG +  A +L  +   M    
Sbjct: 247 ALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGS 306

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           IKP  V+ N++I G+C+ G  + A+E  ++M+   ++P+  +Y T+I G+ R   +++A 
Sbjct: 307 IKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEAL 366

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L  +M  +GL+P+ + YN I+     +G +  + L+   M +K +  D+ T + L  G 
Sbjct: 367 RLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGL 426

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDDAF 487
                +  A +F +++L+   + +DAF
Sbjct: 427 CRNGYITTALKFLNQVLENNLI-EDAF 452


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 143/431 (33%), Positives = 234/431 (54%), Gaps = 13/431 (3%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  T+N +I+  C+EG L EA  L + M   G  P V T+NSLI+G  K G  D  +++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           ++EM + G   D  TYN L+   C+   M  A   F  M R GV  ++V+FST +  F +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +  A+  F +M+  G+  +   YT +I+G C+ G + +A+ + DEM+ +G  ++VVT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y  +++GLC+ + + EA+D+   M + GV  +   +TTLIHGH  + N  KAL L   M 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K ++ DI  Y  LI G C V ++++A  L   M    + PNYI Y  +++     G V 
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  +  +++  G +P              +G  ++A +  ++MV +G+  D + Y  L+
Sbjct: 486 EAIAMLQKILDSGFQPN-------------NGCLNEAVQLFNEMVHKGMSLDKVVYTALL 532

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G++++ N+  AFAL +KM + GL  D+  Y   ++GFC    M ++  +   MI  G+ 
Sbjct: 533 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 592

Query: 448 PDRSTYTTLIN 458
           PDR+ Y  LI 
Sbjct: 593 PDRAVYNCLIT 603



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 249/476 (52%), Gaps = 17/476 (3%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A   +  + +  V P+T T N ++    R+     + +L+  +  +   P VFT+N 
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARD----RSGRLVRRLFEQLPAPNVFTFNI 193

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +I+ LCK+G    A+ +   M +MG  PD  T+N+L+    +   + E E++  EM R G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
              D+V+++ LI  F + G+++ A  YF  MK  G++ + V ++  ++ +C+ G V EA+
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+  +M  +G  ++  TY  +++G C+A  L +A  L +EM+ +GV  +  T+T L+ G 
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+  + +A ++  +M +  ++ + + Y TLI G       EKA  L ++M ++ +  + 
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
             YG LI G C++  + EA  L  +M   G++P  +   T++    +SG   +A   L K
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           ++  G  P+        NG + E     A  L ++M ++G+  D + Y  +L G+ +QG 
Sbjct: 494 ILDSGFQPN--------NGCLNE-----AVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 540

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +HD+  +  +MI+ GL  D   YT  I+G  + N + EA     EM+  G  PD A
Sbjct: 541 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRA 596



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 221/438 (50%), Gaps = 26/438 (5%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           ++L++ L  +G  D A   +  + ++ + P+T T N +L+   R  +      +F ++  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP- 184

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
              AP++ +F+ +I    + G+L  A   F  MK  G +PD V +  +I+GY + G + E
Sbjct: 185 ---APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
             ++ +EM   GC  DVVTYN ++N  C+   +  A   F  M   GV  +  TF+T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
             CK+G + +A+ LF  M  + +  +  TY  LIDG CK G ++ A  L  +M+ + +  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N ++Y +L++G C    V EA  +   M   G++   +   T+I G+  + ++ KA   L
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           S+M ++G++ D   Y  LI G      +D+A +L++KM+  GL P+ I Y  ++    + 
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 429 GRMHDSELILWR----------------------MIEKGLNPDRSTYTTLINGHVSQNNL 466
           G++ ++  +L +                      M+ KG++ D+  YT L++G++ Q NL
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 541

Query: 467 KEAFRFHDEMLQRGFVPD 484
            +AF    +M+  G   D
Sbjct: 542 HDAFALKAKMIDSGLQLD 559



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 210/410 (51%), Gaps = 22/410 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ ++  A+     M++ G  PD VT+N+LI+ Y + G L+E  QL+  M   G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  V TYN+LIN  CK GR + A      M + G+  +  T++T +   C++  + EA 
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M  RG+A +  +++ LI    + G+LD A++   EM   G+  + V YT++++G 
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA  +   M + G   + + Y T+++G    K   +A  L +EM  +G+  D 
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE---------- 290
             +  LI G C    +++A +L   M +  ++P+ + Y T++D   K G+          
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 291 ------------MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
                       + +A +L+ +M+ + +S + + Y  L++GY   G++ +AF L  +M+ 
Sbjct: 494 ILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID 553

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
            G++  L      I G+C      +A E  S+M+  G+ PD   YN LI 
Sbjct: 554 SGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIT 603



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 168/353 (47%), Gaps = 57/353 (16%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++++A  +   M+++GV  + VT++T ++A+C+EG + EA +L   M  +G
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +    FTY  LI+G CK GR D A  +LDEM++ G+  +  TY  L+   C++  ++EAE
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS----------------- 163
           ++   M + GV  + + ++TLI     N   ++AL    EMK+                 
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443

Query: 164 ------------------AGLVPDNVLYTIIINGYCRNGFVLEALKMR------------ 193
                             +GL P+ ++YT +++   ++G V EA+ M             
Sbjct: 444 CNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNN 503

Query: 194 ----------DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
                     +EM+ KG  +D V Y  +L+G  +   L +A  L  +M++ G+  D + +
Sbjct: 504 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCY 563

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
           T  I G C    M +A  +F  M    I PD   YN LI    ++ E+   NK
Sbjct: 564 TCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQIPEIRELGGGNK 616


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 151/493 (30%), Positives = 247/493 (50%), Gaps = 39/493 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P     NTL+ A  R G L +    M S++ +     + TY +LIN  C  G    AK  
Sbjct: 41  PPIRCLNTLLMALARHGMLSD----MESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRH 96

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L  +L+ GL+PD+  Y + ++  CR    + A  +F  M +RG A    +++ L+     
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G +  A+  F  M   G  PD+ +Y+I+++G C  G   EA+ +  + + KG V +V  
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN +++G C    L  A D+F  M  +G  P+  T+T LI G CK G + +A+ L+  M 
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  + P++VTY TLI G C  G +E A +L   M +  ++PN  +  +LI+  C  G + 
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA +    +V KGIK   V   ++I   C+SG    A   + K+++EG  PD+  Y++LI
Sbjct: 337 EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLI 396

Query: 388 NGFVREENMDKAFALVS-----------------------------------KMENQGLV 412
           +G  RE  + +A +L++                                   +M   G+ 
Sbjct: 397 DGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVK 456

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           PDV+TY V +  +C+ GRM D+E ++ +MI+ G+ P+ +TY TLI G+ +   + +AF  
Sbjct: 457 PDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSS 516

Query: 473 HDEMLQRGFVPDD 485
              M+  G  P+D
Sbjct: 517 LKNMIDNGCKPND 529



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 232/474 (48%), Gaps = 6/474 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C    + +AK  L  + + G+ PD+  Y + +  YCR G    A +L   M  +G
Sbjct: 80  LINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRG 139

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                FTY +L+ GLC  G    A  V   M   G +PD+  Y+ ++   C      EA 
Sbjct: 140 CARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAV 199

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +   +G  P++  ++ LI  +   G L+ A+  F+ M+S G +P+   YT +I G+
Sbjct: 200 ALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGF 259

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V  A+ +   M+E G   +VVTY T++ G C    L  A  L + M   G+ P+ 
Sbjct: 260 CKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNE 319

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T   LI   CK G + +A      + QK IK + V Y ++ID  CK G+ + A+ L   
Sbjct: 320 WTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQK 379

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +I+    P+   Y  LI+G C    + EA  L  +M+  G++   V    +I  + R   
Sbjct: 380 IITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFR 439

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           +        +M + GV PD ++Y   I  + ++  M+ A +++ +M + G+ P++ TYN 
Sbjct: 440 SDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNT 499

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           ++ G+   G +  +   L  MI+ G  P+  +YT L+   + +N+      +HD
Sbjct: 500 LIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNS------YHD 547



 Score =  237 bits (605), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 239/538 (44%), Gaps = 51/538 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LC   +   A   L +   KG  P+   YN LI+ YC  G LE A  +   M  KG
Sbjct: 185 MVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKG 244

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  LI G CK G+ +RA  +   M++ GL+P+  TY TL+   C + ++  A 
Sbjct: 245 CLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAF 304

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+AP+  +   LI    ++G+++ A  +   +   G+  + V+YT +I+  
Sbjct: 305 RLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDAL 364

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G    A  +  +++ +G V D   Y+++++GLCR   L EA  L N+M+E GV  + 
Sbjct: 365 CKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANA 424

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             FT LI  H ++   +    + D M    +KPD+VTY   I  +C+ G ME A  +   
Sbjct: 425 VPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQ 484

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT----------LVSCNT 350
           MI   + PN  +Y  LI GY ++G V++AF     M+  G KP           L+  N+
Sbjct: 485 MIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNS 544

Query: 351 --------------------------IIKGYCRSGD---------------ASKADEFLS 369
                                     +IK  C S                   +A  FL 
Sbjct: 545 YHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLV 604

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M S  + P    Y  +I    R + + +A   +  M  +  +P + +Y  I+   C +G
Sbjct: 605 GMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEG 664

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
             H ++ I   ++ K  N D   +  LI+G + + N  +  R    M ++   P  A 
Sbjct: 665 SFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAI 722



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 160/369 (43%), Gaps = 55/369 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ALCK  K D A   + ++  +G  PD   Y++LI+  CRE  L EA  L+N M   G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++     +  LI+   ++ R D  K + D M   G+ PD  TY   +   C+   M +AE
Sbjct: 420 VQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAE 479

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII--- 177
            +  +M   GV P++ +++TLI  ++  G + +A    + M   G  P++  YT+++   
Sbjct: 480 SMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLL 539

Query: 178 ---NGYCRNGFVLEA--------LKMRDEMLEK-------------GCVMDVVT------ 207
              N Y  +  V ++        +K+ +E+LE+              C +  ++      
Sbjct: 540 LKKNSY--HDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLE 597

Query: 208 --------------------YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
                               Y  ++    R K+L EA    + M++R   P   ++  +I
Sbjct: 598 EAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFII 657

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
              C++G+ + A ++F  +  K    D + +  LIDG  + G     ++L + M  +   
Sbjct: 658 CALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCR 717

Query: 308 PNYISYGIL 316
           P    Y  L
Sbjct: 718 PGSAIYSRL 726



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 62/138 (44%)

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
            T+I  YC +GD   A   LS ++  G+ PDS +Y + + G+ R      A  L   M  
Sbjct: 78  TTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQ 137

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G      TY  +L G C  G + ++  +   M   G  PD   Y+ +++G        E
Sbjct: 138 RGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGE 197

Query: 469 AFRFHDEMLQRGFVPDDA 486
           A     + + +GFVP+ A
Sbjct: 198 AVALLTDAMGKGFVPNVA 215



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +  A  FL  M ++   P   +Y  +I A C EG    A  +   +  K        +  
Sbjct: 631 LKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKI 690

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           LI+GL +KG       +L  M +    P +A Y+ L  E       SEA+EI
Sbjct: 691 LIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEI---TVTSEAQEI 739


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 266/493 (53%), Gaps = 27/493 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A+ K  ++   K  L +M++ G+ P+ VTYN L+  YC+ G L+EAFQ++  M    
Sbjct: 246 ILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS-EA 119
           + P + TYN LING+C  G      E++D M  + L PD  TYNTL ++ C +  +S EA
Sbjct: 306 ILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTL-IDGCFELGLSLEA 364

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIIN 178
           +++  +M   GV P+ V+ +  +    +  + +      +E+ +  G  PD V Y  +I 
Sbjct: 365 KKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIK 424

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            Y + G +  AL+M  EM +KG  M+ +T NTIL+ LC+ + + EA +L +   +RG   
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIV 484

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+ TLI G+ ++  + KA  ++D M +  I P + T+N+LI G C  G+ E A + +
Sbjct: 485 DEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKF 544

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            ++    + P+  ++  +I GYC  G V +AF  + E +    KP   +CN ++ G C+ 
Sbjct: 545 DELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA  F + +++E  + D+++YNT+I+ F +++ + +A+ L+S+ME + L PD  TY
Sbjct: 605 GMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTY 663

Query: 419 NVILTGFCRQGRMHDSELILWRM------------IEKGLNPDRS-----------TYTT 455
           N I+T     G++ +++ +L +             +E   NP  S            Y+ 
Sbjct: 664 NSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSD 723

Query: 456 LINGHVSQNNLKE 468
           +IN   S+  LKE
Sbjct: 724 VINELCSRGRLKE 736



 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 154/476 (32%), Positives = 245/476 (51%), Gaps = 3/476 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYN 69
           I SA+    +M + GV  D  T+N L+N YC EG LE+A  ++  M  +  + P   TYN
Sbjct: 185 IASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYN 244

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +++  + KKGR    K++L +M + GL P+  TYN L+   C+  ++ EA +I   M + 
Sbjct: 245 TILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
            + PD+ +++ LI      G +   L     MKS  L PD V Y  +I+G    G  LEA
Sbjct: 305 NILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVFPDFYTFTTLIH 248
            K+ ++M   G   + VT+N  L  LC+ +   E      E++E  G  PD  T+ TLI 
Sbjct: 365 KKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIK 424

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
            + K G+++ AL +   M QK IK + +T NT++D  CK  ++++A+ L      R    
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIV 484

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + ++YG LI GY     V +AF +W EM    I PT+ + N++I G C  G    A E  
Sbjct: 485 DEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKF 544

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            ++   G+ PD  ++N++I G+ +E  ++KAF   ++       PD  T N++L G C++
Sbjct: 545 DELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G M +  L  +  +      D  TY T+I+       LKEA+    EM ++   PD
Sbjct: 605 G-MTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPD 659



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 240/463 (51%), Gaps = 5/463 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC---DRA 84
           P    ++  ++AY   G    A Q+   M    LKP + T N+L+ GL +         A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVSFSTLIG 143
           +EV D+M+++G+S D  T+N L+   C +  + +A  +   M S   V PD V+++T++ 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
             S+ G+L        +MK  GLVP+ V Y  ++ GYC+ G + EA ++ + M +   + 
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D+ TYN ++NG+C A  + E  +L + M    + PD  T+ TLI G  + G   +A  L 
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS-RKISPNYISYGILINGYCS 322
           + M    +KP+ VT+N  +   CK  + E+  +   +++     SP+ ++Y  LI  Y  
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +G ++ A  +  EM  KGIK   ++ NTI+   C+     +A   L      G   D ++
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVT 488

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y TLI G+ REE ++KAF +  +M+   + P V T+N ++ G C  G+   +      + 
Sbjct: 489 YGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           E GL PD  T+ ++I G+  +  +++AF F++E ++  F PD+
Sbjct: 549 ESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 229/458 (50%), Gaps = 46/458 (10%)

Query: 35  TLINAYCREGFLEEAFQLMNSMSGKGLK----PGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           +L+ +Y R    + +  L NS+    L     P    ++  ++     G+   A +V  +
Sbjct: 99  SLLVSYIRTS--DASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQK 156

Query: 91  MLQMGLSPDTATYNTLLVESCRKEN---MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           M+++ L P+  T NTLL+   R  +   ++ A E+F +M + GV+ D+ +F+        
Sbjct: 157 MIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFN-------- 208

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV-MDVV 206
                                      +++NGYC  G + +AL M + M+ +  V  D V
Sbjct: 209 ---------------------------VLVNGYCLEGKLEDALGMLERMVSEFNVNPDNV 241

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TYNTIL  + +   L++  DL  +M   G+ P+  T+  L++G+CK G++ +A  + ++M
Sbjct: 242 TYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            Q +I PD+ TYN LI+G C  G + +  +L   M S K+ P+ ++Y  LI+G   +G  
Sbjct: 302 KQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLS 361

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS-EGVDPDSISYNT 385
            EA +L  +M   G+KP  V+ N  +K  C+     +    + ++V   G  PD ++Y+T
Sbjct: 362 LEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHT 421

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI  +++  ++  A  ++ +M  +G+  + IT N IL   C++ ++ ++  +L    ++G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRG 481

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              D  TY TLI G+  +  +++AF   DEM +    P
Sbjct: 482 YIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITP 519



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 134/270 (49%), Gaps = 4/270 (1%)

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           L+  + L +  L     P    F   +  +   G  + AL +F  M +  +KP+++T NT
Sbjct: 112 LSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNT 171

Query: 281 LIDGFCKVGE---MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           L+ G  +      +  A +++ DM+   +S +  ++ +L+NGYC  G + +A  +   MV
Sbjct: 172 LLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMV 231

Query: 338 GK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
            +  + P  V+ NTI+K   + G  S   + L  M   G+ P+ ++YN L+ G+ +  ++
Sbjct: 232 SEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSL 291

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            +AF +V  M+   ++PD+ TYN+++ G C  G + +   ++  M    L PD  TY TL
Sbjct: 292 KEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTL 351

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           I+G        EA +  ++M   G  P+  
Sbjct: 352 IDGCFELGLSLEAKKLMEQMENDGVKPNQV 381


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 264/522 (50%), Gaps = 41/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC    +D A      + ++ V PD +TY+TL+    ++  L+ A  L++ M    
Sbjct: 164 VLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSR 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           ++P V  YN+L+ G  K G  ++   V D++++  G  P+ ATYN +L   C+     E 
Sbjct: 224 VQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEV 283

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E++  M    + PD++++  LI    R+G +D A   + E+   GLV D  +Y  ++ G
Sbjct: 284 GEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKG 343

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV--F 237
           +C+ G V EA K  D     G + ++ TYN ++ GL  + M+ EA +L+ ++LE+ V   
Sbjct: 344 FCQAGRVQEAWKFWDSAGFAG-LRNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACI 401

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  TF TLIHG C++G  NKA  +F+       + D+ +Y+++I+G C VG +  A K+
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  M      PN   Y  LI+G+C +   ++A R++ +M   G  PT+++ NT+I G C+
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +    +A     +MV  G  PD  +Y +LI G   ++ +D A ++  ++  +GL  DV+ 
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581

Query: 418 YNVILTGFCRQGRMH-----------------------------------DSELILWRMI 442
           +N+++ G C  G++                                    D    LW  I
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641

Query: 443 -EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            E GL PD  +Y T I G  S + + E  +  DE+L RG +P
Sbjct: 642 TEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 247/500 (49%), Gaps = 37/500 (7%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGKGLKP 63
           L K  ++D A   L EM +  V PD V YN L+    + G  E+  ++ + +    G +P
Sbjct: 203 LAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARP 262

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + TYN +++GLCK GR     EV + M+   L PD  TY  L+   CR  ++  A  ++
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL----------------- 166
            E+ + G+  D   +++L+  F + G++  A  ++     AGL                 
Sbjct: 323 SEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSG 382

Query: 167 ------------------VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
                             +PD V +  +I+G C+NGF  +A  + +E    G  +DV +Y
Sbjct: 383 MVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSY 442

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           ++++NGLC    L +A  ++ +M + G  P+ + +  LI G C+    + A+ ++  M  
Sbjct: 443 SSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD 502

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
               P ++TYNTLIDG CK  + ++A+ +  +M+    +P+  +YG LI G  S   + +
Sbjct: 503 NGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDD 562

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDSISYNTLI 387
           A  +W +++ KG+K  ++  N +I G C +G   +A    S M   +   P+ ++YNTL+
Sbjct: 563 ALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLM 622

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G      +DKA  L + +   GL PD+I+YN  + G C   R+H+   +L  ++ +G+ 
Sbjct: 623 DGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGII 682

Query: 448 PDRSTYTTLINGHVSQNNLK 467
           P   T+  L+   +    ++
Sbjct: 683 PTVITWNILVRAVIKYGPIQ 702



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 207/396 (52%), Gaps = 38/396 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+   +D A     E+ + G+  D   YN+L+  +C+ G ++EA++  +S    G
Sbjct: 305 LIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           L+  + TYN +I GL   G  D A E+ D + + +   PDT T+ TL+   C+    ++A
Sbjct: 365 LR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKA 423

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             IF E    G   D+ S+S++I      G+L  A+  + +M   G  P++ +Y  +I+G
Sbjct: 424 FTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISG 483

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+     +A+++  +M + GC   V+TYNT+++GLC+A+   EA  +  EM+E G  PD
Sbjct: 484 FCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543

Query: 240 FYTFTTLI-----------------------------------HGHCKDGNMNKALNLF- 263
             T+ +LI                                   HG C  G +++AL++F 
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFS 603

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D+  +K+  P++VTYNTL+DG  + G ++KA  LW  +    + P+ ISY   I G CS 
Sbjct: 604 DMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSC 663

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             + E  +L  E++ +GI PT+++ N +++   + G
Sbjct: 664 DRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 181/329 (55%), Gaps = 4/329 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV--YPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           M+  L     +D A + L ++ +K V   PDTVT+ TLI+  C+ GF  +AF +      
Sbjct: 374 MIKGLFDSGMVDEA-IELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARV 432

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G +  VF+Y+S+INGLC  GR   A +V ++M + G  P++  YN L+   C+    S+
Sbjct: 433 SGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSD 492

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  I+ +M+  G +P +++++TLI    +  +   A    REM   G  PD   Y  +I 
Sbjct: 493 AVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIR 552

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER-GVF 237
           G   +  + +AL +  ++L KG  +DV+ +N +++GLC A  + EA  +F++M E+    
Sbjct: 553 GLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP 612

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+ TL+ G  + G ++KA  L+  +T+  ++PDI++YNT I G C    + +  +L
Sbjct: 613 PNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQL 672

Query: 298 WADMISRKISPNYISYGILINGYCSMGHV 326
             +++SR I P  I++ IL+      G +
Sbjct: 673 LDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 157/294 (53%), Gaps = 3/294 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC++   + A     E    G   D  +Y+++IN  C  G L +A ++   M   G
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP    YN+LI+G C+  R   A  +  +M   G SP   TYNTL+   C+ E   EA 
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  EM   G  PDI ++ +LI G+FS + ++D AL  ++++   GL  D +++ I+I+G
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFS-DKKIDDALSIWKQILYKGLKVDVMMHNILIHG 588

Query: 180 YCRNGFVLEALKMRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            C  G V EAL +  +M EK  C  ++VTYNT+++GL     + +A  L+  + E G+ P
Sbjct: 589 LCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEP 648

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
           D  ++ T I G C    +++ + L D +  + I P ++T+N L+    K G ++
Sbjct: 649 DIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 10/349 (2%)

Query: 140 TLIGIFSRNGQLDRALMYFREMKSA-GLVPDNVLYTIIINGYCRNGFVLEA----LKMRD 194
            ++  FSR    D AL  FR + S  G  P    +  +++ + R     +A      +  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
               +    ++ TYN +L  LC    L  A  LF+ +  R V PD  T++TL+ G  K  
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQD 207

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK-ISPNYISY 313
            ++ AL+L D M +  ++PD+V YN L+ G  K GE EK  ++W  ++      PN  +Y
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
            ++++G C  G   E   +W  MV   ++P +++   +I G CRSGD   A    S+++ 
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+  D+  YN+L+ GF +   + +A+         GL  ++ TYN+++ G    G M D
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSG-MVD 385

Query: 434 SELILWRMIEKGLN--PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             + LW ++EK +   PD  T+ TLI+G        +AF   +E    G
Sbjct: 386 EAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSG 434



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 5/219 (2%)

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADM----ISRKISPNYISYGILINGYCSMGHVTE 328
           P I ++N L+D F +      A+  +A +      R+I+PN  +Y I++   C+ G +  
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+  +  + + P  ++ +T++ G  +      A + L +M    V PD + YN L+ 
Sbjct: 177 AVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLG 236

Query: 389 GFVREENMDKAFALVSKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           G  +    +K   +  K+ ++ G  P++ TYNV+L G C+ GR  +   +  RM+   L 
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           PD  TY  LI+G     ++  A R + E+++ G V D A
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAA 335


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 135/400 (33%), Positives = 239/400 (59%), Gaps = 6/400 (1%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T+N ++  LC  G+  RA E+L +M +    P+  TYNT++   C +  +  A E+  EM
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 127 SRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIINGYCRNG 184
             RG +APD  +++TLI  + + G+++ A+  F EM + G + P  V+Y  +I GYC  G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            +  AL+ R++M+++G  M V TYN +++ L      ++A  +  EM + G  PD +T+ 
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI+G+CK+GN  KAL +F+ M+QK ++   VTY +LI  F + G++++ ++L+   + +
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            I P+ + Y  LIN +C+ G +  A+ +  EM  K I P  ++ NT+++G+C  G   +A
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
              + +M   G+ PD +SYNTLI+G+  + ++  A  +  +M ++G  P ++TYN ++ G
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            C+  +  D+E ++  M+ KG+ PD STY +LI G  +++
Sbjct: 474 LCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTED 513



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/396 (34%), Positives = 220/396 (55%), Gaps = 6/396 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           M+  LC   K   A   L +M +    P+ VTYNT+I  +C  G ++ A ++M  M  + 
Sbjct: 122 MLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERG 177

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSE 118
           G+ P  +TY +LI+G CK GR + A +V DEML  G ++P    YN L+   C    +  
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDV 237

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A +   +M +RG+A  + +++ L+     + +   A     EM+  G  PD   Y I+IN
Sbjct: 238 ALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILIN 297

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYC+ G   +AL++ +EM +KG     VTY +++    R   + E D LFN  +++G+ P
Sbjct: 298 GYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRP 357

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +  LI+ HC  G+M +A  +   M +K I PD +TYNTL+ GFC +G +++A  L 
Sbjct: 358 DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLI 417

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R I P+ +SY  LI+GY   G + +A R+  EM+ KG  PTL++ N +I+G C+ 
Sbjct: 418 DEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKI 477

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
                A+  + +MV++G+ PD  +Y +LI G   E+
Sbjct: 478 RQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTED 513



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 209/389 (53%), Gaps = 6/389 (1%)

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
           T T+N +L   C       A E+  +M R    P+ V+++T+I  F   G++  AL   R
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 160 EMKS-AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCR 217
           EM+   G+ PD   Y  +I+G+C+ G + +A+K+ DEML KG V    V YN ++ G C 
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              L  A     +M++RG+     T+  L+H    D   + A  + + M +    PD+ T
Sbjct: 232 VGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFT 291

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           YN LI+G+CK G  +KA +++ +M  + +    ++Y  LI  +   G V E  RL+   V
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAV 351

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            KGI+P +V  N +I  +C  GD  +A E +++M  + + PD ++YNTL+ GF     +D
Sbjct: 352 KKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLD 411

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           +A  L+ +M  +G+ PD+++YN +++G+  +G + D+  +   M++KG NP   TY  LI
Sbjct: 412 EARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALI 471

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            G        +A     EM+ +G  PDD+
Sbjct: 472 QGLCKIRQGDDAENLMKEMVAKGITPDDS 500


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 152/466 (32%), Positives = 247/466 (53%), Gaps = 2/466 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM  KG Y D   Y+ +I A  R G   +A +L + M+G G+KP    Y   I+GLCK  
Sbjct: 175 EMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLR 234

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVSF 138
             DRA +VL +M + G  P   TY++++    +   M EA  +  +M    G   D+V  
Sbjct: 235 DADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLA 294

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + L+  +  NG++ +AL  F E+ S G+ P NV Y ++I G    G   E  K+  +M+E
Sbjct: 295 TMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIE 354

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
           +G +     +N ++ GL R K   +A  L   +++ GV PD +T+  LIH  CK   +++
Sbjct: 355 QGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHE 413

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+NL+D M +  +KP IVTY++L+ G+C+ G M++A KL+++M  +   PN ++Y  L+ 
Sbjct: 414 AVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMK 473

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           GY        A+ L  EM   G+     + N +I G        + DE L + +SEG  P
Sbjct: 474 GYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVP 533

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
            +++YN++INGFV+   M  AF +  +M  +G+ P+++TY   + G+CR      +  +L
Sbjct: 534 TTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL 593

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +   G+ PD + Y   I+    Q N+  A  F   +L+ G  PD
Sbjct: 594 IYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPD 639



 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 245/485 (50%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C + ++  A     E+   GV P  VTY  LI     EG  +E ++L   M  +G
Sbjct: 297 LMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQG 356

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  + +N +I GL +  R   A  +L  ++  G+ PD  TY  L+   C+ + + EA 
Sbjct: 357 LLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAV 415

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +M   GV P IV++ +L+  +   G++D AL  + EM   G  P+ V YT ++ GY
Sbjct: 416 NLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGY 475

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      A  + +EM + G      TYN ++NGL     + E D++    L  G  P  
Sbjct: 476 IKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTT 535

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I+G  K G M  A  ++  M +K I P+IVTY + IDG+C+    + A KL   
Sbjct: 536 MTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    I P+  +Y   I+ +C  G+++ A      ++  G+ P +   N+ + GY     
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKM 655

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +F   M+ + V  D+  Y TLI+GF +  N+  A  L S+M    ++PD  T+  
Sbjct: 656 MAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTA 715

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  G CR G +  ++ +L  M    ++P+  TY  LIN  V    L+EAF+ HDEML  G
Sbjct: 716 LTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSG 775

Query: 481 FVPDD 485
            VPDD
Sbjct: 776 VVPDD 780



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 234/440 (53%), Gaps = 2/440 (0%)

Query: 18  LC-EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           LC +M ++G+ P T  +N +I    R+   ++A  L+  +   G+ P VFTY  LI+ LC
Sbjct: 348 LCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLC 406

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K  +   A  + D+M + G+ P   TY++LL+  C K  M EA +++ EM  +G  P+ V
Sbjct: 407 KHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEV 466

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TL+  + +    D A     EM+  G+   +  Y I+ING      V E  +M    
Sbjct: 467 TYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRF 526

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           L +G V   +TYN+I+NG  +A M+  A  ++ +M ++G+ P+  T+T+ I G+C+    
Sbjct: 527 LSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A+ L   + +  I+PDI  YN  ID FCK G M +A      ++   ++P+   Y   
Sbjct: 587 DLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + GY ++  + EA + +Y M+ + +        T+I G+ + G+ + A E  S+M++  V
Sbjct: 647 VTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHV 706

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD  ++  L +G  R  ++D A  L+  M    + P+++TYN+++    R G++ ++  
Sbjct: 707 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQ 766

Query: 437 ILWRMIEKGLNPDRSTYTTL 456
           +   M+  G+ PD +TY  L
Sbjct: 767 LHDEMLSSGVVPDDTTYDIL 786



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 248/486 (51%), Gaps = 4/486 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGKG 60
           ++ LCK    D A   L +M + G  P  +TY+++++   +   ++EA +L + M    G
Sbjct: 227 ISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATG 286

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  V     L++G C  G   +A ++ DE++  G++P   TY  +L++ C  E M++  
Sbjct: 287 KKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYG-VLIKGCDAEGMTDET 345

Query: 121 EIFC-EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
              C +M  +G+ P    F+ +I    R+ +   A+   + +   G VPD   Y  +I+ 
Sbjct: 346 YKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHW 404

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C++  + EA+ + D+M E G    +VTY+++L G C    + EA  L++EM ++G  P+
Sbjct: 405 LCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPN 464

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTL+ G+ K    + A  L + M Q  +     TYN LI+G   V  + + +++  
Sbjct: 465 EVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLK 524

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             +S    P  ++Y  +ING+   G +  AF ++ +M  KGI P +V+  + I GYCR+ 
Sbjct: 525 RFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTN 584

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A + L  +  +G+ PD  +YN  I+ F ++ NM +A   +  +   GL PDV  YN
Sbjct: 585 CCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYN 644

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             +TG+     M ++    + MI++ +  D   YTTLI+G     N+  A   + EM+  
Sbjct: 645 SFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMAN 704

Query: 480 GFVPDD 485
             +PDD
Sbjct: 705 HVIPDD 710



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 227/469 (48%), Gaps = 4/469 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            M  +GV PD  +   L+          +A  L + M GKG       Y+ +I    + G
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 80  -RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
             CD A  + DEM   G+ PD   Y   +   C+  +   A ++  +M   G  P  +++
Sbjct: 200 MHCD-AVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 139 STLIGIFSRNGQLDRALMYFREMKSA-GLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           S+++ +  +  ++D AL    +M  A G   D VL T++++GYC NG V +AL + DE++
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVV 318

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G     VTY  ++ G     M  E   L  +M+E+G+ P  Y F  +I G  +D    
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWK 378

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            A+ L  ++    + PD+ TY  LI   CK  ++ +A  LW  M    + P+ ++Y  L+
Sbjct: 379 DAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
            GYC  G + EA +L+ EM  KG  P  V+  T++KGY +      A   L++M   GV 
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
               +YN LING      + +   ++ +  ++G VP  +TYN I+ GF + G M  +  +
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +M +KG+ P+  TYT+ I+G+   N    A +    + + G  PD A
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIA 606



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 198/386 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K+  A     +M++ GV P  VTY++L+  YC +G ++EA +L + M  KG
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY +L+ G  KK   D A  +L+EM Q G+S    TYN L+        + E +
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+       G  P  ++++++I  F + G +  A   +R+M+  G+ P+ V YT  I+GY
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR      A+K+   +   G   D+  YN  ++  C+   ++ A      +L+ G+ PD 
Sbjct: 581 CRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDV 640

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + + + G+     M +A   +  M ++ +  D   Y TLIDGF KVG +  A +L+++
Sbjct: 641 TVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSE 700

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++  + P+  ++  L +G C  G +  A RL  +M    + P +V+ N +I    R G 
Sbjct: 701 MMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGK 760

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTL 386
             +A +   +M+S GV PD  +Y+ L
Sbjct: 761 LQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 172/359 (47%), Gaps = 37/359 (10%)

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
           +  M + G+VPD    T ++          +AL + DEM  KGC  D   Y+ ++    R
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
             M  +A  LF+EM   GV PD   +   I G CK  + ++AL +   M +   +P  +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 278 YNTLID------------------------------------GFCKVGEMEKANKLWADM 301
           Y++++D                                    G+C  GE+ KA  L+ ++
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +S  ++P  ++YG+LI G  + G   E ++L  +M+ +G+ P+    N +IKG  R    
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A   L  +V  GV PD  +Y  LI+   + + + +A  L  KM+  G+ P ++TY+ +
Sbjct: 378 KDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           L G+C +GRM ++  +   M +KG  P+  TYTTL+ G++ +     A+   +EM Q G
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNG 495



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 2/116 (1%)

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           S+MV+ GV PD+ S   L+       +   A  L  +M  +G   D   Y+V++   C +
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRA-CVR 197

Query: 429 GRMH-DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G MH D+  +   M   G+ PD   Y   I+G     +   A +   +M + GF P
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEP 253


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 151/532 (28%), Positives = 273/532 (51%), Gaps = 48/532 (9%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC   ++D A  + L  M + G  P+ V+YNTL+  +C E   EEA +L++ M+  
Sbjct: 236 LLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADD 295

Query: 58  -GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            G    P V +YN++ING  ++G+ D+A  +  +M+  G+ PD  TYNT++   C+ + +
Sbjct: 296 QGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVV 355

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             A+ +F +M  +GV P   +++ LI  +   G+    +    EM +  L PD  +Y ++
Sbjct: 356 DRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALL 415

Query: 177 INGYCRNGFVLEALKMRDEMLEKG-----------CVMD----------VVTYNTILNGL 215
           ++  C+NG   EA  + D ++ KG           C+ D          VV Y  +++ L
Sbjct: 416 LDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDAL 475

Query: 216 CRA-----------KMLTE------------ADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
           C+            +M+ E            A++L  EML++G+  D   F TL+   C+
Sbjct: 476 CKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCR 535

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
           +G + +A  L ++M +  ++PD+++YNTL+DG C  G  ++A KL   M+S  + PN  +
Sbjct: 536 EGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFT 595

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y  L++GYC    + +A+ L  EM+  G  P +V+ NTI+ G  ++G  S+A E    M+
Sbjct: 596 YNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMI 655

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
           +     D  +YN ++NG  +   +D+AF +   + ++GL   +IT+N+++    + G+  
Sbjct: 656 NSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKE 715

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D+  +   +   GL PD  TY  +    + + +L+E       M + G  P+
Sbjct: 716 DAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPN 767



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 158/504 (31%), Positives = 249/504 (49%), Gaps = 48/504 (9%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V PD  TY+ LI  +CR G LE  F +   +   G +     +N L+ GLC   R D A 
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250

Query: 86  EVLD-EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS-RRGVA--PDIVSFSTL 141
            +L   M + G +P+  +YNTL+   C +    EA E+   M+  +G++  PD+VS++T+
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F R GQ+D+A   F +M   G+ PD V Y  +I+G C+   V  A  +  +ML+KG 
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGV 370

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
                TYN +++G        E   L  EM    + PD + +  L+   CK+G   +A N
Sbjct: 371 KPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARN 430

Query: 262 LFDIMTQKSIKPD---------------------IVTYNTLIDGFCKVGEM--------- 291
           +FD + +K IKPD                     +V Y  LID  CK+G +         
Sbjct: 431 IFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQ 490

Query: 292 --------------EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
                         EKA +L  +M+ + I  + + +  L+   C  G V EA RL   M+
Sbjct: 491 MINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELML 550

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
             G++P ++S NT++ G+C +G   +A + L  MVS G+ P+  +YNTL++G+ +   +D
Sbjct: 551 RVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRID 610

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            A++L+ +M   G  PDV+TYN IL G  + GR  +++ +   MI      D  TY  ++
Sbjct: 611 DAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIIL 670

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGF 481
           NG    N + EAF+    +  +G 
Sbjct: 671 NGLCKNNCVDEAFKMFQSLCSKGL 694



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 258/528 (48%), Gaps = 47/528 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEM-EQKGVY--PDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           +V   C +++ + A   L  M + +G+   PD V+YNT+IN + REG +++A+ L   M 
Sbjct: 272 LVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMI 331

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            +G+ P V TYN++I+GLCK    DRAK V  +ML  G+ P   TYN L+          
Sbjct: 332 DRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWK 391

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ---------------------LDRALM 156
           E   +  EMS   + PD   ++ L+    +NG+                     +D A+ 
Sbjct: 392 EVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVC 451

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL-----------------------KMR 193
            F +M+  GL P+ V Y  +I+  C+ G V +A+                       ++ 
Sbjct: 452 IFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELV 511

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
            EML++G  +DVV +NT++  LCR   + EA  L   ML  GV PD  ++ TL+ GHC  
Sbjct: 512 FEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLT 571

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G  ++A  L D+M    +KP+  TYNTL+ G+CK   ++ A  L  +M+    +P+ ++Y
Sbjct: 572 GRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTY 631

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             +++G    G  +EA  L+  M+    +  + + N I+ G C++    +A +    + S
Sbjct: 632 NTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCS 691

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
           +G+    I++N +I   ++    + A  L + +   GLVPDV TY +I     ++G + +
Sbjct: 692 KGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 751

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
             ++   M E G  P+      L+   + + ++  A  +  ++ ++ F
Sbjct: 752 LGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNF 799



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 254/501 (50%), Gaps = 43/501 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D AK    +M  KGV P   TYN LI+ Y   G  +E  +L+  MS   
Sbjct: 345 VIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHD 404

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P  F Y  L++ LCK GRC  A+ + D +++ G+ PD                + EA 
Sbjct: 405 LEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAM--------------IDEAV 450

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR--------------------- 159
            IF +M ++G++P++V++  LI    + G++D A++ F                      
Sbjct: 451 CIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEEL 510

Query: 160 --EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
             EM   G+  D V++  ++   CR G V+EA ++ + ML  G   DV++YNT+++G C 
Sbjct: 511 VFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCL 570

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
                EA  L + M+  G+ P+ +T+ TL+HG+CK   ++ A +L   M      PD+VT
Sbjct: 571 TGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVT 630

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           YNT++ G  + G   +A +L+ +MI+ +   +  +Y I++NG C    V EAF+++  + 
Sbjct: 631 YNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLC 690

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            KG++  +++ N +I    + G    A +  + + + G+ PD  +Y  +    ++E +++
Sbjct: 691 SKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 750

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           +   L S ME  G  P+    N ++  F  +G +  +   L ++ EK  + + ST + LI
Sbjct: 751 ELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810

Query: 458 N----GHVSQ--NNLKEAFRF 472
           +    G   Q   +L E +RF
Sbjct: 811 SLYSRGEYQQLAKSLPEKYRF 831



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 216/459 (47%), Gaps = 57/459 (12%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE------IFCEMSRR---GVAPD 134
           A ++ D +L          +N LL    R        E      +F  M R     VAPD
Sbjct: 135 ALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPD 194

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK-MR 193
             ++S LIG F R G+L+     F  +   G   +++++  ++ G C    + EA   + 
Sbjct: 195 RCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILL 254

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVF--PDFYTFTTLIHGH 250
             M E GC  +VV+YNT++ G C      EA +L + M + +G+   PD  ++ T+I+G 
Sbjct: 255 WRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGF 314

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
            ++G ++KA NLF  M  + I PD+VTYNT+IDG CK   +++A  ++  M+ + + P+ 
Sbjct: 315 FREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSN 374

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +Y  LI+GY S G   E  RL  EM    ++P       ++   C++G  ++A      
Sbjct: 375 GTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDS 434

Query: 371 MVSEGVDPDS-----------------------------------------ISYNTLIN- 388
           ++ +G+ PD+                                         + +N +IN 
Sbjct: 435 VIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINE 494

Query: 389 --GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
             G    E  +KA  LV +M +QG+  DV+ +N ++   CR+GR+ +++ ++  M+  G+
Sbjct: 495 VYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGV 554

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            PD  +Y TL++GH       EA +  D M+  G  P++
Sbjct: 555 RPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNE 593


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 152/459 (33%), Positives = 249/459 (54%), Gaps = 2/459 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL-KPGVFTYNSLINGLCKKGRCDRAKE 86
           P  V+ N L+++  +         L + +  KG  KP + T +  IN L   G+   A  
Sbjct: 53  PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           V+ ++++ G   D  T  TL+   C K    EA  ++     +G + D V + TLI    
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + G+   A+   R+M+  G+ P+ ++Y ++++G C+ G V EA  +  EM+ KG  +DV 
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 207 TYNTILNGLCRAKMLTEADDLFNEM-LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           TYN++++G C A     A  L NEM ++  V PD YTF  L+   CK G + +A N+F +
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL 292

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++ ++PD+V+ N L++G+C  G M +A +++  M+ R   PN ISY  LINGYC +  
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V EA RL  EM  + + P  V+ N ++ G  +SG      + +  M + G  PD I+YN 
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++ +++ E +DKA AL   + + G+ P++ TYN+++ G C+ GRM  ++ I   +  KG
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKG 472

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             P+  TY  +ING   +  L EA     EM+  GF P+
Sbjct: 473 CRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPN 511



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 234/445 (52%), Gaps = 3/445 (0%)

Query: 18  LC-EMEQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL 75
           LC  ++ KG   P  VT +  IN+    G +  AF +M  +  +G     FT  +L+ GL
Sbjct: 77  LCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGL 136

Query: 76  CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           C KGR   A  + D  +  G S D   Y TL+   C+     +A E+  +M + GV P++
Sbjct: 137 CLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNL 196

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           + ++ ++    + G +  A     EM   G+  D   Y  +I+G+C  G    A+++ +E
Sbjct: 197 IMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNE 256

Query: 196 MLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           M+ K  V  DV T+N +++ LC+  M+ EA ++F  M++RG+ PD  +   L++G C  G
Sbjct: 257 MVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRG 316

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            M++A  +FD M ++   P++++Y+TLI+G+CKV  +++A +L  +M  R + P+ ++Y 
Sbjct: 317 CMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYN 376

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            L++G    G V   + L   M   G  P L++ N ++  Y +     KA      +V  
Sbjct: 377 CLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDT 436

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+ P+  +YN LI+G  +   M  A  +   +  +G  P++ TYN+++ G  R+G + ++
Sbjct: 437 GISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEA 496

Query: 435 ELILWRMIEKGLNPDRSTYTTLING 459
           E +L  M++ G  P+  T+  L+  
Sbjct: 497 EALLLEMVDDGFPPNAVTFDPLVRA 521



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 201/372 (54%), Gaps = 1/372 (0%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
            KG   D V Y TLIN  C+ G   +A +L+  M   G++P +  YN +++GLCK+G   
Sbjct: 154 SKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVT 213

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS-RRGVAPDIVSFSTL 141
            A  +  EM+  G+  D  TYN+L+   C       A  +  EM  +  V PD+ +F+ L
Sbjct: 214 EACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNIL 273

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           +    + G +  A   F  M   GL PD V    ++NG+C  G + EA ++ D M+E+G 
Sbjct: 274 VDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGK 333

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + +V++Y+T++NG C+ KM+ EA  L  EM +R + PD  T+  L+ G  K G +    +
Sbjct: 334 LPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWD 393

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L + M      PD++TYN L+D + K   ++KA  L+  ++   ISPN  +Y ILI+G C
Sbjct: 394 LVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLC 453

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G +  A  ++  +  KG +P + + N +I G  R G   +A+  L +MV +G  P+++
Sbjct: 454 KGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAV 513

Query: 382 SYNTLINGFVRE 393
           +++ L+   + +
Sbjct: 514 TFDPLVRALLEK 525



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 179/320 (55%), Gaps = 1/320 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +V+ LCK+  +  A     EM  KG+  D  TYN+LI+ +C  G  + A +L+N M  K 
Sbjct: 202 VVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKE 261

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            ++P V+T+N L++ LCK G    A+ V   M++ GL PD  + N L+   C +  MSEA
Sbjct: 262 DVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEA 321

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +E+F  M  RG  P+++S+STLI  + +   +D AL    EM    LVPD V Y  +++G
Sbjct: 322 KEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDG 381

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++G VL    + + M   G   D++TYN +L+   + + L +A  LF  +++ G+ P+
Sbjct: 382 LSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPN 441

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  LI G CK G M  A  +F +++ K  +P+I TYN +I+G  + G +++A  L  
Sbjct: 442 IRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLL 501

Query: 300 DMISRKISPNYISYGILING 319
           +M+     PN +++  L+  
Sbjct: 502 EMVDDGFPPNAVTFDPLVRA 521



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 1/237 (0%)

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS-PNY 310
           K    + A++ F  M      P IV+ N L+    K         L + + S+    P+ 
Sbjct: 32  KTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSL 91

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++  I IN    +G +  AF +  ++V +G      +  T++KG C  G   +A      
Sbjct: 92  VTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDH 151

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
            VS+G   D + Y TLING  +      A  L+ KME  G+ P++I YN+++ G C++G 
Sbjct: 152 AVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGL 211

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           + ++  +   M+ KG+  D  TY +LI+G       + A R  +EM+ +  V  D +
Sbjct: 212 VTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 251/484 (51%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+ +I  A+  L EM  +GV P   TYN +I+ YC+ G +++A  +   M   G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +TYNSLI GLC  G+ D A+E+L+  +  G +P   T+  L+   C+ E + +A 
Sbjct: 350 CNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M       D+ ++  LI +  +  +L  A     EM + GL P+ V+YT II+GY
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGY 468

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  AL++   M  +GC  +  TY +++ GL + K L +A  L  +M E G+ P  
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGV 528

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TTLI G CK    + A  LF++M +  + PD   YN L D  CK G  E+A   ++ 
Sbjct: 529 IAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEA---YSF 585

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + +    ++Y  L++G+   G+   A  L  +MV +G K  L + + +++  C+   
Sbjct: 586 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKK 645

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A   L +M   GV  + ++Y  +I+  ++E   D A +L ++M + G  P   TY V
Sbjct: 646 LNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTV 705

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            ++ +C+ G++ ++E ++  M   G+ PD  TY   ING      +  AF     M+   
Sbjct: 706 FISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDAS 765

Query: 481 FVPD 484
             P+
Sbjct: 766 CEPN 769



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/518 (30%), Positives = 247/518 (47%), Gaps = 39/518 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR------------------ 42
           M+ A CK   +  A  + C + + G+  DT T N L+  YCR                  
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244

Query: 43  ------------EGFLE-----EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                       +G  E     EA  L+  M   G    +  Y  LI GLCK+GR   A+
Sbjct: 245 CRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDAR 304

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +LDEM   G+ P   TYN ++   C+   M +A  I   M + G  PD  ++++LI   
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+LD A        + G  P  + +T +INGYC+   + +AL+++  M+   C +D+
Sbjct: 365 C-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y  ++N L +   L EA +  NEM   G+ P+   +T++I G+CK G +  AL +F +
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKL 483

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  +   P+  TY +LI G  +  ++ KA  L   M    I+P  I+Y  LI G C    
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHE 543

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              AFRL+  M   G+ P   + N +    C+SG A +A  FL   V +GV    ++Y +
Sbjct: 544 FDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTS 600

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++GF +  N D A  L+ KM N+G   D+ TY+V+L   C+Q +++++  IL +M   G
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +  +   YT +I+  + +     A    +EM+  G  P
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 241/500 (48%), Gaps = 19/500 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +ID A      M       D   Y  LIN   ++  L+EA + +N M   G
Sbjct: 394 LINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V  Y S+I+G CK G    A EV   M   G  P+  TY +L+    + + + +A 
Sbjct: 454 LAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAM 513

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G+ P +++++TLI    +  + D A   F  M+  GL PD   Y ++ +  
Sbjct: 514 ALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDAL 573

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G   EA      ++ KG V+  VTY ++++G  +A     A  L  +M+  G   D 
Sbjct: 574 CKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT++ L+   CK   +N+AL++ D MT   +K +IV Y  +I    K G+ + A  L+ +
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS    P+  +Y + I+ YC +G + EA  L  EM   G+ P +V+ +  I G    G 
Sbjct: 691 MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGY 750

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREE----------------NMDKAFALVS 404
             +A   L +MV    +P+  +Y  L+  F++                   ++  + L+ 
Sbjct: 751 MDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLE 810

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M   GL P V+TY+ I+ GFC+  R+ ++ ++L  M+ K ++P+   YT LI       
Sbjct: 811 RMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIK 870

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
              +   F  +M++ GF P 
Sbjct: 871 LFGKDVSFVTDMIEFGFQPQ 890



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 237/462 (51%), Gaps = 4/462 (0%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           Q+G+ PDTVTYNT+I AYC++G L  A +    +   G++   +T N+L+ G C+     
Sbjct: 172 QEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLR 231

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           +A  +L  M  MG   +  +Y  L+        + EA  +   M + G + ++  ++ LI
Sbjct: 232 KACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLI 291

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               + G++  A     EM   G+VP    Y  +I+GYC++G + +AL ++  M + GC 
Sbjct: 292 KGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCN 351

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D  TYN+++ GLC  K L EA++L N  + RG  P   TFT LI+G+CK   ++ AL +
Sbjct: 352 PDDWTYNSLIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV 410

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
              M   + K D+  Y  LI+   K   +++A +   +M +  ++PN + Y  +I+GYC 
Sbjct: 411 KSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCK 470

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +G V  A  ++  M  +G  P   +  ++I G  +     KA   ++KM  +G+ P  I+
Sbjct: 471 VGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIA 530

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y TLI G  ++   D AF L   ME  GL PD   YNV+    C+ GR  ++   L   +
Sbjct: 531 YTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---V 587

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            KG+   + TYT+L++G     N   A    ++M+  G   D
Sbjct: 588 RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 629



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 228/471 (48%), Gaps = 41/471 (8%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           +A Q +  + GK L      YN  +  L +    +   ++   ++Q GL PDT TYNT++
Sbjct: 127 DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMI 186

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
           +  C+K +++ A   FC +   G+  D  + + L+  + R   L +A      M   G  
Sbjct: 187 MAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCR 246

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
            +   YTI+I G      V EAL +   M++ GC +++  Y  ++ GLC+   + +A  L
Sbjct: 247 RNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGL 306

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
            +EM  RGV P  +T+  +I G+CK G M  AL +  +M Q    PD  TYN+LI G C 
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG 366

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL--------------- 332
            G++++A +L    I+R  +P  I++  LINGYC    + +A R+               
Sbjct: 367 -GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQA 425

Query: 333 --------------------WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
                                 EM   G+ P +V   +II GYC+ G    A E    M 
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLME 485

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            EG  P++ +Y +LI G ++++ + KA AL++KM+  G+ P VI Y  ++ G C++    
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEF- 544

Query: 433 DSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           D+   L+ M+EK GL PD   Y  L +        +EA+ F   ++++G V
Sbjct: 545 DNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVV 592



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 236/510 (46%), Gaps = 54/510 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  ++  AK  L EM   G+ P+ V Y ++I+ YC+ G +  A ++   M  +G
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEG 488

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +TY SLI GL +  +  +A  ++ +M + G++P    Y TL+   C+K     A 
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAF 548

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M + G+ PD  +++ L     ++G+ + A  +   +   G+V   V YT +++G+
Sbjct: 549 RLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGF 605

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A  + ++M+ +GC  D+ TY+ +L  LC+ K L EA  + ++M   GV  + 
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I    K+G  + A +LF+ M     KP   TY   I  +CK+G++E+A  L  +
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 725

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRL---------------------------- 332
           M    ++P+ ++Y I ING   MG++  AF                              
Sbjct: 726 MERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSL 785

Query: 333 -------------WYE----------MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
                        W E          M+  G+ PT+V+ ++II G+C++    +A   L 
Sbjct: 786 INAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLD 845

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M+ + + P+   Y  LI      +   K  + V+ M   G  P + +Y+ ++ G C +G
Sbjct: 846 HMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEG 905

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLING 459
               ++ +   ++    N +   +  L +G
Sbjct: 906 DYDRAKSLFCDLLGMDYNHNEVAWKILNDG 935



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 222/509 (43%), Gaps = 54/509 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   + +A      ME +G +P+  TY +LI    ++  L +A  L+  M   G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + PGV  Y +LI G CKK   D A  + + M + GL+PD   YN L    C+      AE
Sbjct: 524 ITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKS---GRAE 580

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E +  + R+GV    V++++L+  FS+ G  D A +   +M + G   D   Y++++   
Sbjct: 581 EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EAL + D+M   G   ++V Y  I++ + +      A  LFNEM+  G  P  
Sbjct: 641 CKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSA 700

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA------ 294
            T+T  I  +CK G + +A +L   M +  + PD+VTY+  I+G   +G M++A      
Sbjct: 701 TTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKR 760

Query: 295 ------------------------------------------NKLWA---DMISRKISPN 309
                                                     N +W     M+   ++P 
Sbjct: 761 MVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPT 820

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y  +I G+C    + EA  L   M+GK I P       +IK  C      K   F++
Sbjct: 821 VVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVT 880

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M+  G  P   SY+ LI G   E + D+A +L   +       + + + ++  G  + G
Sbjct: 881 DMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAG 940

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLIN 458
            +     +L  M  +    D  +Y+ L +
Sbjct: 941 HVDFCSQLLAAMDNRHCRIDSESYSMLTD 969



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 191/446 (42%), Gaps = 55/446 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK H+ D+A      ME+ G+ PD   YN L +A C+ G  EEA+  +     KG
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KG 590

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY SL++G  K G  D A  ++++M+  G   D  TY+ LL   C+++ ++EA 
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M+  GV  +IV+++ +I    + G+ D A   F EM S+G  P    YT+ I+ Y
Sbjct: 651 SILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSY 710

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL---------------------------- 212
           C+ G + EA  +  EM   G   DVVTY+  +                            
Sbjct: 711 CKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNC 770

Query: 213 -----------------------NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
                                  +G+     L     L   M++ G+ P   T++++I G
Sbjct: 771 WTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAG 830

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK   + +A  L D M  K+I P+   Y  LI   C +    K      DMI     P 
Sbjct: 831 FCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQ 890

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             SY  LI G C  G    A  L+ +++G       V+   +  G  ++G      + L+
Sbjct: 891 LESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLA 950

Query: 370 KMVSEGVDPDSISYNTLINGFVREEN 395
            M +     DS SY+ L +  +RE +
Sbjct: 951 AMDNRHCRIDSESYSMLTDS-IREAS 975


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/453 (31%), Positives = 246/453 (54%), Gaps = 1/453 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VNA    H  D A  FL  M  +G  P + T+N L+    R  + ++A+ + N +  K 
Sbjct: 95  IVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSK- 153

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +    +++  +I G C+ G   +   +L  + + GLSP+   Y TL+   C+  N+  A+
Sbjct: 154 VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAK 213

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +FC+M R G+ P+  ++S L+  F + G        +  MK +G+VP+   Y  +I+ Y
Sbjct: 214 NLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEY 273

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A K+  EM EKG    V+TYN ++ GLCR K   EA  L +++ + G+ P+ 
Sbjct: 274 CNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNI 333

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G C  G M+ A+ LF+ +    + P +VTYNTLI G+ KV  +  A  L  +
Sbjct: 334 VTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKE 393

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I+P+ ++Y ILI+ +  + +  +A  +   M   G+ P + + + +I G C  G+
Sbjct: 394 MEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGN 453

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    +    + P+S+ YNT+I+G+ +E +  +A  L+++M + G+VP+V ++  
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            +   CR  +  ++EL+L +MI  GL P  S Y
Sbjct: 514 TIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 217/419 (51%), Gaps = 1/419 (0%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y++++N        D+A   L  M+  G  P + T+N L+    R     +A  IF E+ 
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
            + V  D  SF  +I      G   +       ++  GL P+ V+YT +I+G C+ G V+
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A  +  +M   G V +  TY+ ++NG  +  +  E   ++  M   G+ P+ Y +  LI
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
             +C  G ++KA  +F  M +K I   ++TYN LI G C+  +  +A KL   +    +S
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN ++Y ILING+C +G +  A RL+ ++   G+ PTLV+ NT+I GY +  + + A + 
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           + +M    + P  ++Y  LI+ F R    +KA  + S ME  GLVPDV TY+V++ G C 
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCV 450

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            G M ++  +   + E  L P+   Y T+I+G+  + +   A R  +EM+  G VP+ A
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVA 509



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 228/455 (50%), Gaps = 1/455 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           T  Y+T++NAY      ++A   ++ M  +G  P   T+N+L+  L +    D+A  + +
Sbjct: 89  TPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFN 148

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           E L+  +  D  ++  ++   C      +   +   +   G++P++V ++TLI    + G
Sbjct: 149 E-LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYG 207

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +  A   F +M   GLVP+   Y++++NG+ + G   E  +M + M   G V +   YN
Sbjct: 208 NVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYN 267

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +++  C   M+ +A  +F EM E+G+     T+  LI G C+     +A+ L   + + 
Sbjct: 268 CLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV 327

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            + P+IVTYN LI+GFC VG+M+ A +L+  + S  +SP  ++Y  LI GY  + ++  A
Sbjct: 328 GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  EM  + I P+ V+   +I  + R     KA E  S M   G+ PD  +Y+ LI+G
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHG 447

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                NM +A  L   +    L P+ + YN ++ G+C++G  + +  +L  M+  G+ P+
Sbjct: 448 LCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN 507

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +++ + I         KEA     +M+  G  P 
Sbjct: 508 VASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 160/364 (43%), Gaps = 39/364 (10%)

Query: 158 FREMKSAGLVPD-NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
              + S+G++P    L   +I+G   +  +L+  +         C+     Y+TI+N   
Sbjct: 45  LNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFT----PCLTYTPLYDTIVNAYV 100

Query: 217 RAKMLTEADDLFNEMLERGVFP----------------------------------DFYT 242
            +    +A    + M+  G  P                                  D Y+
Sbjct: 101 HSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSKVVLDAYS 160

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           F  +I G C+ G   K   L  ++ +  + P++V Y TLIDG CK G +  A  L+  M 
Sbjct: 161 FGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMD 220

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              + PN  +Y +L+NG+   G   E F+++  M   GI P   + N +I  YC  G   
Sbjct: 221 RLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVD 280

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           KA +  ++M  +G+    ++YN LI G  R +   +A  LV K+   GL P+++TYN+++
Sbjct: 281 KAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILI 340

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            GFC  G+M  +  +  ++   GL+P   TY TLI G+    NL  A     EM +R   
Sbjct: 341 NGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA 400

Query: 483 PDDA 486
           P   
Sbjct: 401 PSKV 404



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 101/211 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   K+D+A     +++  G+ P  VTYNTLI  Y +   L  A  L+  M  + 
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TY  LI+   +    ++A E+   M + GL PD  TY+ L+   C   NM EA 
Sbjct: 399 IAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEAS 458

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  +    + P+ V ++T+I  + + G   RAL    EM  +G+VP+   +   I   
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLL 518

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           CR+    EA  +  +M+  G    V  Y  +
Sbjct: 519 CRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 141/447 (31%), Positives = 251/447 (56%), Gaps = 2/447 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   ++  A   + ++ + G  P+T+T NTL+   C EG ++EA +  + +  +G
Sbjct: 99  IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y  LING+CK G    A  +L  + +  + P+   Y+ ++   C+   + EA 
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAY 218

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM  +G++PD+V++S L+  F   GQL+RA+    EM    + PD   YTI+++  
Sbjct: 219 DLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDAL 278

Query: 181 CRNGFVLEALKMRDEMLEKGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G V EA  +   M+ K CV +DVV Y+T+++G C    +  A  +F  M + GV PD
Sbjct: 279 CKEGKVKEAENVLAVMV-KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPD 337

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            + ++ +I+G CK   +++ALNLF+ + QK++ PD VTY +LID  CK G +     L+ 
Sbjct: 338 VHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFD 397

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+ R   P+ I+Y  LI+  C  GH+  A  L+ +M  + I+P + +   ++ G C+ G
Sbjct: 398 EMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVG 457

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A EF   ++++G   +  +Y  +ING  +E  +D+A AL S+ME+ G + D +T+ 
Sbjct: 458 RLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFE 517

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGL 446
           +++  F  +     +E ++  MI +GL
Sbjct: 518 IMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 245/476 (51%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           H  D A      M      P T  +N ++ +         A  L   M    ++P  FT 
Sbjct: 37  HNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTL 96

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N +IN  C  G+   A   + ++L++G  P+T T NTL+   C +  + EA     ++  
Sbjct: 97  NIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLA 156

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           +G     +S+  LI    + G+   A+   R ++   + P+ V+Y++II+  C++  V E
Sbjct: 157 QGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDE 216

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A  +  EM+ KG   DVVTY+ +++G C    L  A DL NEM+   + PD YT+T L+ 
Sbjct: 217 AYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVD 276

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
             CK+G + +A N+  +M +  +  D+V Y+TL+DG+C V E+  A +++  M    ++P
Sbjct: 277 ALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTP 336

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           +   Y I+ING C +  V EA  L+ E+  K + P  V+  ++I   C+SG  S   +  
Sbjct: 337 DVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLF 396

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M+  G  PD I+YN LI+   +  ++D+A AL +KM++Q + P+V T+ ++L G C+ 
Sbjct: 397 DEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKV 456

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GR+ ++      ++ KG   +  TYT +ING   +  L EA      M   G + D
Sbjct: 457 GRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISD 512


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 243/438 (55%), Gaps = 7/438 (1%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF---TYNSLINGLCKKGRCDRAK 85
           + V +   +   C+ G +E+AF+   +M             T +S+I  LCK GR D A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR--RGVAPDIVSFSTLIG 143
            +L+ M++ G  PD AT++ L+ E C+ + + EA+E    M+R     A    S+++L+ 
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 144 IFSRNGQLDRALMYFREMKSA-GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
              +  ++ +A   F  M S   +VPD V Y+I+I+G+C+   +  A K+  +M++  CV
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            +V TYN  LNGL R   + +A  ++ EM+  G  PD  T++TLIHG       ++A  L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M  +  +P+ VTYN L+ G CK  + ++A++L+  M+ R   P+ ++Y  L+ G+C+
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCN 309

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +G + +A  ++ EMV KG  P +V+ N ++KG+ R+G   +A +    MVS    PD++S
Sbjct: 310 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369

Query: 383 YNTLINGFVREENMDKAFALVSKME-NQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +N +I+G  + + +D A  +  +ME + G  PD++TYN ++ G C + R+ ++  +   +
Sbjct: 370 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 429

Query: 442 IEKGLNPDRSTYTTLING 459
               L+PD   +  L+  
Sbjct: 430 DRLKLSPDPHAFNVLLEA 447



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/436 (32%), Positives = 234/436 (53%), Gaps = 7/436 (1%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTV---TYNTLINAYCREGFLEEAFQLMNSMSG 58
           +  LCK  KI+ A      M++           T +++I   C+ G ++ A  L+ +M  
Sbjct: 18  LGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMIK 77

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTA--TYNTLLVESCRKENM 116
           +G  P + T++ LIN LCK  +   A+E L  M +   +  ++  +YN+LL   C+ + +
Sbjct: 78  RGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKV 137

Query: 117 SEAEEIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
            +A  IF  M S R V PD+VS+S LI  F +  +L RA   +++M     VP+   Y  
Sbjct: 138 HQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNA 197

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
            +NG  R G + +A  + +EM+  GC  DV+TY+T+++G   A+   +A +LF  M+ RG
Sbjct: 198 FLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRG 257

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  T+  L+HG CK+   ++A  LF  M ++   PD VTY TL+ GFC VG++E+A 
Sbjct: 258 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAV 317

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           +++ +M+S+   P+ ++Y  L+ G+   G   EA +L+  MV +  KP  VS N +I G 
Sbjct: 318 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGL 377

Query: 356 CRSGDASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            ++     A E   +M  + G  PD ++YN+LI G   E+ + +A  +  +++   L PD
Sbjct: 378 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 437

Query: 415 VITYNVILTGFCRQGR 430
              +NV+L      G 
Sbjct: 438 PHAFNVLLEAMYAAGH 453



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 216/393 (54%), Gaps = 4/393 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-- 58
           ++  LCK  ++DSA   L  M ++G  PD  T++ LIN  C+   ++EA + +  M+   
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMS 117
                  F+YNSL+N LCK  +  +A  +   M+ +  + PD  +Y+ L+   C+ + + 
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            AE+++ +M      P++ +++  +    R G++  A   + EM SAG  PD + Y+ +I
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G+       +A ++ + M+ +GC  + VTYN +L+GLC+     EA +LF +M+ERG  
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 294

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+TTL++G C  G + +A+ +FD M  K   PD+V YN L+ GF + G+  +A +L
Sbjct: 295 PDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQL 354

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM-VGKGIKPTLVSCNTIIKGYC 356
           +  M+SR+  P+ +S+ I+I+G      + +A  ++  M    G  P LV+ N++I G C
Sbjct: 355 FQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC 414

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
                S+A +   ++    + PD  ++N L+  
Sbjct: 415 GEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 218/425 (51%), Gaps = 7/425 (1%)

Query: 67  TYNSLINGLCKKGRCDRAKEV---LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + + + GLCK G+ ++A E    + E L     P + T ++++ E C+   +  A  + 
Sbjct: 13  AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS--AGLVPDNVLYTIIINGYC 181
             M +RG  PD+ + S LI    +  ++  A  + + M    +        Y  ++N  C
Sbjct: 73  ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLC 132

Query: 182 RNGFVLEALKMRDEML-EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           +   V +A  +   M+ E+  V DVV+Y+ +++G C+   L  A+ L+ +M++    P+ 
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+   ++G  + G +  A  +++ M      PD++TY+TLI GF    + ++A++L+  
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MISR   PN ++Y  L++G C      EA  L+ +MV +G  P  V+  T++ G+C  G 
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E   +MVS+G DPD ++YN L+ GF R     +A  L   M ++   PD +++N+
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372

Query: 421 ILTGFCRQGRMHDSELILWRMIE-KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++ G  +  R+ D+  +  RM +  G +PD  TY +LI G   +  L EA +   E+ + 
Sbjct: 373 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 432

Query: 480 GFVPD 484
              PD
Sbjct: 433 KLSPD 437



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/327 (34%), Positives = 178/327 (54%), Gaps = 2/327 (0%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++N+LCK  K+  A  +F   + ++ V PD V+Y+ LI+ +C+   L  A +L   M   
Sbjct: 127 LLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 186

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P V TYN+ +NGL +KGR   A+ V +EM+  G SPD  TY+TL+          +A
Sbjct: 187 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQA 246

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+F  M  RG  P+ V+++ L+    +  + D A   FR+M   G  PD V YT ++ G
Sbjct: 247 HELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYG 306

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C  G + +A+++ DEM+ KG   DVV YN +L G  RA    EA  LF  M+ R   PD
Sbjct: 307 FCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPD 366

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQ-KSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
             +   +I G  K   ++ A+ +F+ M Q     PD+VTYN+LI G C    + +A K++
Sbjct: 367 TVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVF 426

Query: 299 ADMISRKISPNYISYGILINGYCSMGH 325
            ++   K+SP+  ++ +L+    + GH
Sbjct: 427 KEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 187/356 (52%), Gaps = 8/356 (2%)

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI---IINGYCRNGFVLEALKM 192
           V+++  +G   ++G++++A    R M+ +              +I   C+ G V  AL +
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV---FPDFYTFTTLIHG 249
            + M+++G   D+ T++ ++N LC+A  + EA +    M  R +       +++ +L++ 
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM-NRTISTRASSCFSYNSLLNS 130

Query: 250 HCKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
            CK   +++A  +F  M +++S+ PD+V+Y+ LIDGFCK+ E+ +A KL+  MI     P
Sbjct: 131 LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 190

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N  +Y   +NG    G + +A  ++ EM+  G  P +++ +T+I G+  +    +A E  
Sbjct: 191 NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             M+S G  P++++YN L++G  +E   D+A  L  KM  +G  PD +TY  +L GFC  
Sbjct: 251 EAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNV 310

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G++  +  +   M+ KG +PD   Y  L+ G        EA +    M+ R   PD
Sbjct: 311 GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPD 366



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 41/224 (18%)

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAF---RLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           +  K   N +++   + G C  G + +AF   R   E +     P+  +C+++I+  C++
Sbjct: 3   VESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKA 62

Query: 359 GDASKADEFLSKMVSEGVDPD-------------------------------------SI 381
           G    A   L  M+  G  PD                                       
Sbjct: 63  GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF 122

Query: 382 SYNTLINGFVREENMDKAFALVSKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           SYN+L+N   + + + +AFA+ S M   + +VPDV++Y++++ GFC+   +  +E +  +
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           MI+    P+ +TY   +NG + +  + +A   ++EM+  G  PD
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPD 226


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 138/419 (32%), Positives = 236/419 (56%), Gaps = 1/419 (0%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y  +IN   +    D +    +EM+  G  P +  +N LL       + ++    F E S
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-S 155

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           +  V  D+ SF  +I      G+++++     E++  G  P+ V+YT +I+G C+ G + 
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           +A  +  EM + G V +  TY  +++GL +  +  +  +++ +M E GVFP+ YT+  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +  CKDG    A  +FD M ++ +  +IVTYNTLI G C+  +  +ANK+   M S  I+
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN I+Y  LI+G+CS+G + +A  L  ++  +G+ P+LV+ N ++ G+CR GD S A + 
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           + +M   G+ P  ++Y  LI+ F R +NM+ A  L S ME  GLVPDV TY+V++ GFC 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +G+M+++  +   M+EK L P+   Y T+I G+  + +   A R   +M ++   P+ A
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVA 514



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 249/454 (54%), Gaps = 1/454 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           Y  +INAY +   L+ +    N M  KG  PG   +N+L+  +      ++     +E  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES- 155

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           ++ +  D  ++  ++   C    + ++ ++  E+   G +P++V ++TLI    + G+++
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           +A   F EM   GLV +   YT++I+G  +NG   +  +M ++M E G   ++ TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           N LC+     +A  +F+EM ERGV  +  T+ TLI G C++   N+A  + D M    I 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+++TYNTLIDGFC VG++ KA  L  D+ SR +SP+ ++Y +L++G+C  G  + A ++
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             EM  +GIKP+ V+   +I  + RS +   A +  S M   G+ PD  +Y+ LI+GF  
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +  M++A  L   M  + L P+ + YN ++ G+C++G  + +  +   M EK L P+ ++
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           Y+ LI     +  LKEA    ++M+  G  P D 
Sbjct: 516 YSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDT 549



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 246/449 (54%), Gaps = 1/449 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +   +DS+  +  EM  KG  P +  +N L+          + +   N    K 
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK- 158

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V+++  +I G C+ G  +++ ++L E+ + G SP+   Y TL+   C+K  + +A+
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM + G+  +  +++ LI    +NG   +    + +M+  G+ P+   Y  ++N  
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQL 278

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G   +A K+ DEM E+G   ++VTYNT++ GLCR     EA+ + ++M    + P+ 
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNL 338

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G C  G + KAL+L   +  + + P +VTYN L+ GFC+ G+   A K+  +
Sbjct: 339 ITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKE 398

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P+ ++Y ILI+ +    ++  A +L   M   G+ P + + + +I G+C  G 
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A      MV + ++P+ + YNT+I G+ +E +  +A  L   ME + L P+V +Y+ 
Sbjct: 459 MNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSY 518

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           ++   C++ ++ ++E ++ +MI+ G++P 
Sbjct: 519 LIRVLCKERKLKEAEDLVEKMIDSGIDPS 547



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 130/365 (35%), Positives = 205/365 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  +I+ AK    EM + G+  +  TY  LI+   + G  ++ F++   M   G
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P ++TYN ++N LCK GR   A +V DEM + G+S +  TYNTL+   CR+   +EA 
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M    + P++++++TLI  F   G+L +AL   R++KS GL P  V Y ++++G+
Sbjct: 324 KVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGF 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G    A KM  EM E+G     VTY  +++   R+  +  A  L + M E G+ PD 
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDV 443

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LIHG C  G MN+A  LF  M +K ++P+ V YNT+I G+CK G   +A +L+ D
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRD 503

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  ++++PN  SY  LI   C    + EA  L  +M+  GI P+   CN I +    S  
Sbjct: 504 MEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRAKTDSPV 563

Query: 361 ASKAD 365
           A   D
Sbjct: 564 AQIID 568



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 183/347 (52%), Gaps = 34/347 (9%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKG------------------------------- 200
           LY +IIN Y ++  +  ++   +EM++KG                               
Sbjct: 96  LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES 155

Query: 201 ---CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
               V+DV ++  ++ G C A  + ++ DL  E+ E G  P+   +TTLI G CK G + 
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           KA +LF  M +  +  +  TY  LI G  K G  ++  +++  M    + PN  +Y  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           N  C  G   +AF+++ EM  +G+   +V+ NT+I G CR   A++A++ + +M S  ++
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+ I+YNTLI+GF     + KA +L   ++++GL P ++TYNV+++GFCR+G    +  +
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  M E+G+ P + TYT LI+     +N++ A +    M + G VPD
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPD 442


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 242/485 (49%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   +I  A     E  + GV P  VTY  LI     EG  +E ++L   M  +G
Sbjct: 300 LMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQG 359

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  + +N +I GL +  + + A  + D ++  G+ PD  TY  L+    +   + EA 
Sbjct: 360 LLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAV 418

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +M   GV P IV+  +L+  +   G +D AL  + EM   G  P+ V YT ++ GY
Sbjct: 419 NLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGY 478

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +     +A  + +EM + G      TYN ++NGLC    + E D++    +  G  P  
Sbjct: 479 IKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTT 538

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I+G  K G M  AL ++  M +K I P+IVTY + IDG+C+    + A KL   
Sbjct: 539 MTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 598

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I P+  +Y   IN +C  G+++ A      ++  G+ P +   N+ + GY     
Sbjct: 599 MRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKM 658

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +F   M+ + +  D+  Y TLI+GF +  N+  A  L S+M     +PD  T+  
Sbjct: 659 MAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTA 718

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  G CR G +  ++ +L  M    + P+  TY  LIN H+    L+EAF+ HD+ML  G
Sbjct: 719 LTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSG 778

Query: 481 FVPDD 485
            VPDD
Sbjct: 779 VVPDD 783



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/467 (32%), Positives = 250/467 (53%), Gaps = 4/467 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLE-EAFQLMNSMSGKGLKPGVFTYNSLINGLCKK 78
           EM  KG Y D   Y+ ++ A C  G +  +A +L + M+G G+KP    Y   I GLCK 
Sbjct: 178 EMRCKGYYADAKMYDVVMRA-CVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKL 236

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVS 137
              DRA +VL +M + GL P   TYN+++    +   M EA  +  +M    G   D+  
Sbjct: 237 RDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFL 296

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
            +TL+  +  +G++ +AL  F E    G+ P NV YT++I G    G   E  K+  +M+
Sbjct: 297 ATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMI 356

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           E+G +     +N ++ GL R K   +A  LF+ +++ GV PD +T+  LIH   K   ++
Sbjct: 357 EQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVH 415

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A+NL+D M +  +KP IVT ++L+ G+C+ G M++A KL+++M  +   PN ++Y  L+
Sbjct: 416 EAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLM 475

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
            GY       +A+ L  EM   G+     + N +I G C      + DE L + VSEG  
Sbjct: 476 KGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFV 535

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P +++YN++INGFV+   M  A A+  +M  +G+ P+++TY   + G+CR      +  +
Sbjct: 536 PTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKL 595

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L  M   G++PD + Y   IN    Q N+  A  F   +L+ G  P+
Sbjct: 596 LIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPN 642



 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 247/486 (50%), Gaps = 4/486 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGKG 60
           +  LCK    D A   L +M + G+ P   TYN++++   + G ++EA +L + M    G
Sbjct: 230 ITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATG 289

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  VF   +L+ G C  G   +A ++ DE ++ G++P   TY T+L++ C  E M++  
Sbjct: 290 KKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTY-TVLIKGCDAEGMTDET 348

Query: 121 EIFC-EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
              C +M  +G+ P    F+ +I    RN Q + A+  F  +   G VPD   Y  +I+ 
Sbjct: 349 YKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTG-VPDVFTYGCLIHW 407

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++  V EA+ + D+M E G    +VT +++L G C    + EA  L++EM  +G  P+
Sbjct: 408 LSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPN 467

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTL+ G+ K    +KA  L + M Q  +     TYN LI+G C V  + + +++  
Sbjct: 468 EVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLK 527

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             +S    P  ++Y  +ING+   G +  A  ++ +M  KGI P +V+  + I GYCR+ 
Sbjct: 528 RFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTN 587

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A + L  M   G+ PD  +YN  IN F ++ NM  A   +  +   GL P+V  YN
Sbjct: 588 CCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYN 647

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             +TG+     M ++    + MI++ +  D   YTTLI+G     N+  A   + EML  
Sbjct: 648 SFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLAN 707

Query: 480 GFVPDD 485
             +PDD
Sbjct: 708 HNIPDD 713



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 226/437 (51%), Gaps = 2/437 (0%)

Query: 18  LC-EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           LC +M ++G+ P T  +N +I    R    E+A  L + +   G+ P VFTY  LI+ L 
Sbjct: 351 LCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLS 409

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K  +   A  + D+M + G+ P   T ++LL+  C K  M EA +++ EM  +G  P+ V
Sbjct: 410 KHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEV 469

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TL+  + +    D+A     EM   G+      Y I+ING C    V E  +M    
Sbjct: 470 TYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRF 529

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           + +G V   +TYN+I+NG  +A M+  A  ++ +M E+G+ P+  T+T+ I G+C+    
Sbjct: 530 VSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCC 589

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A+ L   M    I PDI  YN  I+ FCK G M  A      ++   ++PN   Y   
Sbjct: 590 DLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSF 649

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + GY ++  + EA + +Y M+ + I        T+I G+ + G+ + A E  S+M++   
Sbjct: 650 VTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHN 709

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD  ++  L +G  R  ++D A  L+  M    + P+ +TYN+++    R G++ ++  
Sbjct: 710 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQ 769

Query: 437 ILWRMIEKGLNPDRSTY 453
           +  +M+  G+ PD +TY
Sbjct: 770 LHDKMLSSGVVPDDTTY 786



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 226/469 (48%), Gaps = 4/469 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            M  +GV PD  +   L+ A  R     +A  L + M  KG       Y+ ++   C  G
Sbjct: 143 RMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRA-CVVG 201

Query: 80  RCD-RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           R    A  + DEM   G+ PD   Y   +   C+  +   A ++  +M   G+ P   ++
Sbjct: 202 RMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTY 261

Query: 139 STLIGIFSRNGQLDRALMYFREMKSA-GLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++++ +  + G++D AL    +M  A G   D  L T ++ GYC +G + +AL + DE +
Sbjct: 262 NSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAV 321

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G     VTY  ++ G     M  E   L  +M+E+G+ P  Y F  +I G  ++    
Sbjct: 322 RDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWE 381

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            A+ LFD++    + PD+ TY  LI    K  ++ +A  LW  M    + P+ ++   L+
Sbjct: 382 DAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLL 440

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
            GYC  G + EA +L+ EM GKG  P  V+  T++KGY +     KA   L++M   GV 
Sbjct: 441 LGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVS 500

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
               +YN LING    + + +   ++ +  ++G VP  +TYN I+ GF + G M  +  +
Sbjct: 501 CGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAM 560

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +M EKG+ P+  TYT+ I+G+   N    A +    M   G  PD A
Sbjct: 561 YRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIA 609



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 199/384 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K HK+  A     +M++ GV P  VT ++L+  YC +G ++EA +L + M GKG
Sbjct: 404 LIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKG 463

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY +L+ G  KK   D+A  +L+EM Q G+S    TYN L+   C  + + E +
Sbjct: 464 FPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVD 523

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+       G  P  ++++++I  F + G +  AL  +R+M   G+ P+ V YT  I+GY
Sbjct: 524 EMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGY 583

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR      A+K+   M   G   D+  YN  +N  C+   ++ A      +L+ G+ P+ 
Sbjct: 584 CRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNV 643

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + + + G+     M +A   +  M ++ I  D   Y TLIDGF KVG +  A +L+++
Sbjct: 644 TVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSE 703

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    P+  ++  L +G C  G +  A RL  +M    + P  V+ N +I  + R G 
Sbjct: 704 MLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGK 763

Query: 361 ASKADEFLSKMVSEGVDPDSISYN 384
             +A +   KM+S GV PD  +YN
Sbjct: 764 LQEAFQLHDKMLSSGVVPDDTTYN 787



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K    D A   L EM Q GV     TYN LIN  C    + E  +++     +G  P   
Sbjct: 480 KKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTM 539

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TYNS+ING  K G    A  +  +M + G++P+  TY + +   CR      A ++   M
Sbjct: 540 TYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYM 599

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G+ PDI +++  I +F + G +  AL +   +   GL P+  +Y   + GY     +
Sbjct: 600 RCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMM 659

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            EA K    M+++    D   Y T+++G  +   +  A +L++EML     PD  TFT L
Sbjct: 660 AEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTAL 719

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
            HG C+ G+++ A  L D MT+  + P+ VTYN LI+   + G++++A +L   M+S  +
Sbjct: 720 THGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGV 779

Query: 307 SPNYISYGIL 316
            P+  +Y I 
Sbjct: 780 VPDDTTYNIF 789



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 167/331 (50%), Gaps = 6/331 (1%)

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
           +  M + G+VPD    T ++    R     +AL + DEM  KG   D   Y+ ++     
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
            +M  +A  LF+EM   GV PD   +   I G CK  + ++A+ +   M +  +KP   T
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260

Query: 278 YNTLIDGFCKVGEMEKANKLWADMI---SRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
           YN+++D   KVG M++A +L   M+    +K+  +      L+ GYC  G + +A  L+ 
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKM--DVFLATTLMQGYCLHGEIGKALDLFD 318

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           E V  G+ PT V+   +IKG    G   +  +   +M+ +G+ P +  +N +I G +R +
Sbjct: 319 EAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNK 378

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
             + A AL   + + G VPDV TY  ++    +  ++H++  +  +M E G+ P   T  
Sbjct: 379 QWEDAIALFDLVVDTG-VPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCH 437

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +L+ G+  +  + EA + + EM  +GF P++
Sbjct: 438 SLLLGYCEKGCMDEALKLYSEMPGKGFPPNE 468


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/492 (31%), Positives = 245/492 (49%), Gaps = 23/492 (4%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++   K  L  M  +G YP    +N+L++AYC  G    A++L+  M   G  PG   YN
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYN 411

Query: 70  SLINGLCKKG---RC---DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            LI  +C       C   + A++   EML  G+  +    ++     C      +A  + 
Sbjct: 412 ILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM  +G  PD  ++S ++G      +++ A + F EMK  GLV D   YTI+++ +C+ 
Sbjct: 472 REMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +A K  +EM E GC  +VVTY  +++   +AK ++ A++LF  ML  G  P+  T+
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591

Query: 244 TTLIHGHCKDGNMNKALNLFDIMT-----------------QKSIKPDIVTYNTLIDGFC 286
           + LI GHCK G M KA  +F+ M                    S +P++V Y  L+DGFC
Sbjct: 592 SALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFC 651

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K+  +E+A KL   M      PN I Y  LI+G C +G + EA  +  EM   G   TL 
Sbjct: 652 KLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLY 711

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + +++I  Y +      A + LSKM+     P+ + Y  +I+G  +    D+A+ L+  M
Sbjct: 712 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 771

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           E +G  P+V+TY  ++ GF R G++     +L RM  KG+ P+  TY  LI+       L
Sbjct: 772 EEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 831

Query: 467 KEAFRFHDEMLQ 478
             A    +EM Q
Sbjct: 832 DVAHNLLEEMKQ 843



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/539 (28%), Positives = 248/539 (46%), Gaps = 61/539 (11%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LCK  K   A   L  ME +   PDTV Y  LI+  C     EEA   +N M      P
Sbjct: 279 SLCKVGKWREA---LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V TY++L+ G   K +  R K VL+ M+  G  P    +N+L+   C   + S A ++ 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 124 CEMSRRGVAPDIVSFSTLIGI-------------------------------------FS 146
            +M + G  P  V ++ LIG                                      F+
Sbjct: 396 KKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFT 455

Query: 147 R----NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
           R     G+ ++A    REM   G +PD   Y+ ++   C    +  A  + +EM   G V
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLV 515

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DV TY  +++  C+A ++ +A   FNEM E G  P+  T+T LIH + K   ++ A  L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK----------------- 305
           F+ M  +   P+IVTY+ LIDG CK G+MEKA +++  M   K                 
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNS 635

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             PN + YG L++G+C +  V EA +L   M  +G +P  +  + +I G C+ G   +A 
Sbjct: 636 ERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 695

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E  ++M   G      +Y++LI+ + + +  D A  ++SKM      P+V+ Y  ++ G 
Sbjct: 696 EVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 755

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+ G+  ++  ++  M EKG  P+  TYT +I+G      ++      + M  +G  P+
Sbjct: 756 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPN 814



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 242/499 (48%), Gaps = 21/499 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K + A   + EM  +G  PDT TY+ ++   C    +E AF L   M   GL   
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  +++  CK G  ++A++  +EM ++G +P+  TY  L+    + + +S A E+F 
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN-------------- 170
            M   G  P+IV++S LI    + GQ+++A   F  M  +  VPD               
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSER 637

Query: 171 ---VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
              V+Y  +++G+C+   V EA K+ D M  +GC  + + Y+ +++GLC+   L EA ++
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
             EM E G     YT+++LI  + K    + A  +   M + S  P++V Y  +IDG CK
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
           VG+ ++A KL   M  +   PN ++Y  +I+G+  +G +     L   M  KG+ P  V+
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              +I   C++G    A   L +M        +  Y  +I GF +E    ++  L+ ++ 
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKE--FIESLGLLDEIG 875

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRM--IEKGLNPDRSTYTTLINGHVSQNN 465
                P +  Y +++    +  R+  +  +L  +      L    STY +LI      N 
Sbjct: 876 QDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 935

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           + +AFR   EM ++G +P+
Sbjct: 936 VDKAFRLFSEMSKKGVIPE 954



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 128/512 (25%), Positives = 223/512 (43%), Gaps = 55/512 (10%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK------------------------- 62
           P   TYN LI A+ +   L+ A  +   MS   L+                         
Sbjct: 233 PSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL 292

Query: 63  -------PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
                  P    Y  LI+GLC+    + A + L+ M      P+  TY+TLL     K+ 
Sbjct: 293 METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 352

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +   + +   M   G  P    F++L+  +  +G    A    ++M   G  P  V+Y I
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNI 412

Query: 176 IINGYCRNGFVLE------ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
           +I   C +   L       A K   EML  G V++ +  ++    LC A    +A  +  
Sbjct: 413 LIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
           EM+ +G  PD  T++ ++   C    M  A  LF+ M +  +  D+ TY  ++D FCK G
Sbjct: 473 EMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
            +E+A K + +M     +PN ++Y  LI+ Y     V+ A  L+  M+ +G  P +V+ +
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592

Query: 350 TIIKGYCRSGDASKADEFLSKMVSE----GVD-------------PDSISYNTLINGFVR 392
            +I G+C++G   KA +   +M        VD             P+ + Y  L++GF +
Sbjct: 593 ALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCK 652

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              +++A  L+  M  +G  P+ I Y+ ++ G C+ G++ +++ +   M E G      T
Sbjct: 653 LHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYT 712

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y++LI+ +        A +   +ML+    P+
Sbjct: 713 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 744



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 202/424 (47%), Gaps = 25/424 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +++A  K  K+  A      M  +G  P+ VTY+ LI+ +C+ G +E+A Q+   M G  
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSK 618

Query: 60  ----------------GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY 103
                             +P V  Y +L++G CK  R + A+++LD M   G  P+   Y
Sbjct: 619 DVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVY 678

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           + L+   C+   + EA+E+  EMS  G    + ++S+LI  + +  + D A     +M  
Sbjct: 679 DALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 738

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
               P+ V+YT +I+G C+ G   EA K+   M EKGC  +VVTY  +++G  R   +  
Sbjct: 739 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIET 798

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
             +L   M  +GV P++ T+  LI   CK+G ++ A NL + M Q         Y  +I+
Sbjct: 799 CLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIE 858

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           GF K  E  ++  L  ++     +P    Y +L++       +  A RL  E+       
Sbjct: 859 GFNK--EFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVA--TFSA 914

Query: 344 TLV----SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           TLV    + N++I+  C +    KA    S+M  +GV P+  ++ +LI G  R   + +A
Sbjct: 915 TLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEA 974

Query: 400 FALV 403
             L+
Sbjct: 975 LLLL 978



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 207/477 (43%), Gaps = 15/477 (3%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCR---EGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           F+    Q G    +  YN L++   R   E   EE  Q +     +    G F  N L+ 
Sbjct: 152 FVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVF--GEFL-NVLVR 208

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
             C+ G    A E L  +      P  +TYN L+    + + +  A  +  EMS   +  
Sbjct: 209 KYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRM 268

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D  +         + G+   AL     M++   VPD V YT +I+G C      EA+   
Sbjct: 269 DGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEEAMDFL 325

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           + M    C+ +VVTY+T+L G    K L     + N M+  G +P    F +L+H +C  
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE------MEKANKLWADMISRKIS 307
           G+ + A  L   M +    P  V YN LI   C   +      +E A K +++M++  + 
Sbjct: 386 GDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVV 445

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            N I+        CS G   +AF +  EM+G+G  P   + + ++   C +     A   
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLL 505

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M   G+  D  +Y  +++ F +   +++A    ++M   G  P+V+TY  ++  + +
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++  +  +   M+ +G  P+  TY+ LI+GH     +++A +  + M     VPD
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPD 622



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 146/340 (42%), Gaps = 74/340 (21%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK H+++ A+  L  M  +G  P+ + Y+ LI+  C+ G L+EA ++   MS  G
Sbjct: 646 LLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHG 705

Query: 61  LKPGVFTYNSLIN-----------------------------------GLCKKGRCDRAK 85
               ++TY+SLI+                                   GLCK G+ D A 
Sbjct: 706 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 765

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +++  M + G  P+  TY  ++    R   +    E+   M  +GVAP+ V++  LI   
Sbjct: 766 KLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 825

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE---------- 195
            +NG LD A     EMK          Y  +I G+  N   +E+L + DE          
Sbjct: 826 CKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFL 883

Query: 196 ---------------------MLEKGCVMDVV------TYNTILNGLCRAKMLTEADDLF 228
                                +LE+             TYN+++  LC A  + +A  LF
Sbjct: 884 SLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLF 943

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           +EM ++GV P+  TF +LI G  ++  +++AL L D ++ 
Sbjct: 944 SEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISH 983



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 8/99 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTV-----TYNTLINAYCREGFLEEAFQLMNS 55
           +V+ L K  +++ A   L   E+   +  T+     TYN+LI + C    +++AF+L + 
Sbjct: 889 LVDNLIKAQRLEMALRLL---EEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSE 945

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
           MS KG+ P + T+ SLI GL +  +   A  +LD +  M
Sbjct: 946 MSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHM 984


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/511 (29%), Positives = 263/511 (51%), Gaps = 27/511 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +  K+ +++       +M   G+ P T T+N LI A C    ++ A +L + M  KG
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP  FT+  L+ G CK G  D+  E+L+ M   G+ P+   YNT++   CR+    ++E
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK---SAGLV-PDNVLYTII 176
           ++  +M   G+ PDIV+F++ I    + G++  A   F +M+     GL  P+++ Y ++
Sbjct: 238 KMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           + G+C+ G + +A  + + + E   +  + +YN  L GL R     EA+ +  +M ++G+
Sbjct: 298 LKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI 357

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P  Y++  L+ G CK G ++ A  +  +M +  + PD VTY  L+ G+C VG+++ A  
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L  +M+     PN  +  IL++    MG ++EA  L  +M  KG     V+CN I+ G C
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477

Query: 357 RSGDASKADEFLSKMVSEG--------------VD---------PDSISYNTLINGFVRE 393
            SG+  KA E +  M   G              VD         PD I+Y+TL+NG  + 
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
               +A  L ++M  + L PD + YN+ +  FC+QG++  +  +L  M +KG +    TY
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +LI G   +N + E     DEM ++G  P+
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 263/511 (51%), Gaps = 27/511 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC    +D+A+    EM +KG  P+  T+  L+  YC+ G  ++  +L+N+M   G
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFG 212

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P    YN++++  C++GR D +++++++M + GL PD  T+N+ +   C++  + +A 
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272

Query: 121 EIFCEMSRR---GVA-PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            IF +M      G+  P+ ++++ ++  F + G L+ A   F  ++    +     Y I 
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW 332

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           + G  R+G  +EA  +  +M +KG    + +YN +++GLC+  ML++A  +   M   GV
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            PD  T+  L+HG+C  G ++ A +L   M + +  P+  T N L+    K+G + +A +
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK-------------- 342
           L   M  +    + ++  I+++G C  G + +A  +   M   G                
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512

Query: 343 ---------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
                    P L++ +T++ G C++G  ++A    ++M+ E + PDS++YN  I+ F ++
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             +  AF ++  ME +G    + TYN ++ G   + ++ +   ++  M EKG++P+  TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            T I        +++A    DEM+Q+   P+
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 231/480 (48%), Gaps = 27/480 (5%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    YN L+ +  +E  +E    L   M   G+ P  +T+N LI  LC     D A+E+
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            DEM + G  P+  T+  L+   C+     +  E+   M   GV P+ V ++T++  F R
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM-LEKGCVM--- 203
            G+ D +     +M+  GLVPD V +   I+  C+ G VL+A ++  +M L++   +   
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           + +TYN +L G C+  +L +A  LF  + E        ++   + G  + G   +A  + 
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             MT K I P I +YN L+DG CK+G +  A  +   M    + P+ ++YG L++GYCS+
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G V  A  L  EM+     P   +CN ++    + G  S+A+E L KM  +G   D+++ 
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 384 NTLINGFVREENMDKAFALVSKMENQG-----------------------LVPDVITYNV 420
           N +++G      +DKA  +V  M   G                        +PD+ITY+ 
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C+ GR  +++ +   M+ + L PD   Y   I+    Q  +  AFR   +M ++G
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 257/544 (47%), Gaps = 65/544 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   CK    D     L  ME  GV P+ V YNT+++++CREG  +++ +++  M  +G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEV-----LDEMLQMGLSPDTATYNTLLVESCR--- 112
           L P + T+NS I+ LCK+G+   A  +     LDE L +   P++ TYN +L   C+   
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP-RPNSITYNLMLKGFCKVGL 306

Query: 113 -----------KEN---------------------MSEAEEIFCEMSRRGVAPDIVSFST 140
                      +EN                       EAE +  +M+ +G+ P I S++ 
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+    + G L  A      MK  G+ PD V Y  +++GYC  G V  A  +  EM+   
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C+ +  T N +L+ L +   ++EA++L  +M E+G   D  T   ++ G C  G ++KA+
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486

Query: 261 NLF-----------------------DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            +                        D + + +  PD++TY+TL++G CK G   +A  L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +A+M+  K+ P+ ++Y I I+ +C  G ++ AFR+  +M  KG   +L + N++I G   
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
                +    + +M  +G+ P+  +YNT I      E ++ A  L+ +M  + + P+V +
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           +  ++  FC+      ++ +    +          Y+ + N  ++   L +A    + +L
Sbjct: 667 FKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVL 725

Query: 478 QRGF 481
            RGF
Sbjct: 726 DRGF 729



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 208/438 (47%), Gaps = 24/438 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +  AK  +  M++ GV PD VTY  L++ YC  G ++ A  L+  M    
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +T N L++ L K GR   A+E+L +M + G   DT T N ++   C    + +A 
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486

Query: 121 EIFCEMSRRGVA-----------------------PDIVSFSTLIGIFSRNGQLDRALMY 157
           EI   M   G A                       PD++++STL+    + G+   A   
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
           F EM    L PD+V Y I I+ +C+ G +  A ++  +M +KGC   + TYN+++ GL  
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              + E   L +EM E+G+ P+  T+ T I   C+   +  A NL D M QK+I P++ +
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           +  LI+ FCKV + + A +++   +S       + Y ++ N   + G + +A  L   ++
Sbjct: 667 FKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL-YSLMFNELLAAGQLLKATELLEAVL 725

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            +G +        +++  C+  +   A   L KM+  G   D  +   +I+G  +  N  
Sbjct: 726 DRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKK 785

Query: 398 KAFALVSKMENQGLVPDV 415
           +A +   KM     V +V
Sbjct: 786 EANSFADKMMEMASVGEV 803



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 204/401 (50%), Gaps = 17/401 (4%)

Query: 95  GLSPD-TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           G+S D T T   +LV +   E + E   +    S +     + S  +++ IF+++  +D+
Sbjct: 36  GISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTK--LSSLLSVVSIFAKSNHIDK 93

Query: 154 ALMYFREMKSAGLVPDN----VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           A   F+ ++S    P+N     LY +++    +   V     +  +M+  G      T+N
Sbjct: 94  AFPQFQLVRSR--FPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFN 151

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            ++  LC +  +  A +LF+EM E+G  P+ +TF  L+ G+CK G  +K L L + M   
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF 211

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            + P+ V YNT++  FC+ G  + + K+   M    + P+ +++   I+  C  G V +A
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271

Query: 330 FRLWYEM-----VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI-SY 383
            R++ +M     +G   +P  ++ N ++KG+C+ G    A + L + + E  D  S+ SY
Sbjct: 272 SRIFSDMELDEYLGLP-RPNSITYNLMLKGFCKVGLLEDA-KTLFESIRENDDLASLQSY 329

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N  + G VR     +A  ++ +M ++G+ P + +YN+++ G C+ G + D++ I+  M  
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G+ PD  TY  L++G+ S   +  A     EM++   +P+
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 267/520 (51%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC   ++  A  + L  M + G  PDTV+Y+ L+  +C E   EEA +L+  M+  
Sbjct: 139 LLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND 198

Query: 58  -GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            G+   P V TY ++I+GLCK    DRA+ V  +M+  G+ P+  TYN L+         
Sbjct: 199 HGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKW 258

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLI--------------------------------GI 144
            E  ++  +MS RG+ PD  ++ +L+                                  
Sbjct: 259 KEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSA 318

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           +++ G +D+A+  F +M+  GL P+ V Y  +I+  C+ G V +A    ++M+ +G   +
Sbjct: 319 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 378

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +V +N+++ GLC       A++L  EML++G+ P+   F TLI   C  G + +   L D
Sbjct: 379 IVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLID 438

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M    ++PD  +Y  LI G+C  G  ++A K++  M+S  +SP  ++Y  L++GYCS  
Sbjct: 439 LMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSAS 498

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A+ L+ EM+ KG+ P +V+ NTI+ G  ++   S+A E    M++ G   D  +YN
Sbjct: 499 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 558

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            ++NG  +   +D+AF +   + ++GL  ++IT+ +++    + GR  D+  +   +   
Sbjct: 559 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 618

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL P+  TY  +    + + +L+E       M + G  P+
Sbjct: 619 GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN 658



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 150/495 (30%), Positives = 243/495 (49%), Gaps = 42/495 (8%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V P+T TY+ LI   CR G L+ +F     +   G +      N L+ GLC   R   A 
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153

Query: 86  EV-LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR---RGVAPDIVSFSTL 141
           +V L  M ++G +PDT +Y+ LL   C +    EA E+   M+    R   P++V+++T+
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I    +    DRA   F++M   G+ P+N  Y  +I+GY   G   E ++M ++M  +G 
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             D  TY ++LN LC    L+E     + M+E G+ PD + F      + K G ++KA++
Sbjct: 274 KPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 330

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +F+ M Q  + P++V Y  LID  CK+G ++ A   +  MI+  ++PN + +  L+ G C
Sbjct: 331 IFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC 390

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNT------------------------------- 350
           ++     A  L YEM+ +GI P  V  NT                               
Sbjct: 391 TVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAF 450

Query: 351 ----IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
               +I GYC +G   +A++    MVS G+ P  ++YNTL++G+     +D A+ L  +M
Sbjct: 451 SYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREM 510

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
             +G+ P V+TYN IL G  +  R  +++ +   MI  G   D  TY  ++NG    N +
Sbjct: 511 LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCV 570

Query: 467 KEAFRFHDEMLQRGF 481
            EAF+    +  +G 
Sbjct: 571 DEAFKMFQSLCSKGL 585



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 248/481 (51%), Gaps = 3/481 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK    D A+    +M   GV P+  TYN LI+ Y   G  +E  Q++  MS +G
Sbjct: 213 VIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARG 272

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  +TY SL+N LC           LD M++ GLSPD   +N       +   + +A 
Sbjct: 273 LKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 329

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF +M + G++P++V++  LI    + G++D A + F +M + G+ P+ V++  ++ G 
Sbjct: 330 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 389

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C       A ++  EML++G   + V +NT++  LC    + E   L + M   GV PD 
Sbjct: 390 CTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 449

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++T LI G+C  G  ++A  +FD M    + P  VTYNTL+ G+C    ++ A  L+ +
Sbjct: 450 FSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE 509

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + ++P  ++Y  +++G       +EA  L+  M+  G K  + + N I+ G C+S  
Sbjct: 510 MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC 569

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    + S+G+  + I++  +I   ++    + A  L + +   GLVP+V+TY +
Sbjct: 570 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRL 629

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +      +G + + + +   M + G  P+      L+   + + ++  A  +  ++ +R 
Sbjct: 630 VAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 689

Query: 481 F 481
           F
Sbjct: 690 F 690



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 222/435 (51%), Gaps = 3/435 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC   ++ S   FL  M + G+ PD   +N   +AY + G +++A  + N M   G
Sbjct: 283 LLNYLCALSEMHS---FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 339

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V  Y +LI+ LCK GR D A+   ++M+  G++P+   +N+L+   C  +    AE
Sbjct: 340 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 399

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +G+ P+ V F+TLI      G++         M+  G+ PD   YT +I+GY
Sbjct: 400 ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGY 459

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EA K+ D M+  G     VTYNT+L+G C A  + +A  LF EML +GV P  
Sbjct: 460 CLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 519

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T++HG  +    ++A  L+  M     K DI TYN +++G CK   +++A K++  
Sbjct: 520 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQS 579

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S+ +  N I++ I+I      G   +A  L+  +   G+ P +V+   + +     G 
Sbjct: 580 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 639

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             + D   S M   G  P+S   N L+   +   ++ +A A +SK++ +    +  T ++
Sbjct: 640 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSL 699

Query: 421 ILTGFCRQGRMHDSE 435
           +++ F      H ++
Sbjct: 700 LISIFTSDEYQHHAK 714



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 205/403 (50%)

Query: 3   NALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK 62
           +A  K   ID A     +M Q G+ P+ V Y  LI+A C+ G +++A    N M  +G+ 
Sbjct: 317 SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 376

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P +  +NSL+ GLC   + +RA+E++ EML  G+ P+   +NTL+   C    + E   +
Sbjct: 377 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 436

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
              M   GV PD  S++ LI  +   G+ D A   F  M S GL P  V Y  +++GYC 
Sbjct: 437 IDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 496

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
              + +A  +  EML KG    VVTYNTIL+GL + K  +EA +L+  M+  G   D YT
Sbjct: 497 ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 556

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +  +++G CK   +++A  +F  +  K ++ +I+T+  +I    K G  E A  L+A + 
Sbjct: 557 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 616

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           +  + PN ++Y ++       G + E   L+  M   G  P     N +++     GD S
Sbjct: 617 ANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDIS 676

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           +A  +LSK+       ++ + + LI+ F  +E    A +L  K
Sbjct: 677 RAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSLPEK 719



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 207/428 (48%), Gaps = 40/428 (9%)

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TY+ LI  LC+ GR   +      +L+ G   +    N LL             
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLL------------- 140

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +  C+  R G A D++                      + M   G  PD V Y+I++ G+
Sbjct: 141 KGLCDGKRVGEAMDVL---------------------LQRMPELGCTPDTVSYSILLKGF 179

Query: 181 C---RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           C   R    LE L+M      + C  +VVTY T+++GLC+A++   A+ +F +M++ GV 
Sbjct: 180 CNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVK 239

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  LIHG+   G   + + + + M+ + +KPD  TY +L++  C + EM     L
Sbjct: 240 PNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDL 299

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M+   +SP++  + I  + Y   G + +A  ++ +M   G+ P +V+   +I   C+
Sbjct: 300 ---MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCK 356

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G    A+   ++M++EGV P+ + +N+L+ G    +  ++A  LV +M +QG+ P+ + 
Sbjct: 357 LGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVF 416

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           +N ++   C  GR+ +   ++  M   G+ PD  +YT LI+G+       EA +  D M+
Sbjct: 417 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMV 476

Query: 478 QRGFVPDD 485
             G  P +
Sbjct: 477 SIGLSPTE 484



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 168/329 (51%), Gaps = 7/329 (2%)

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
           S  + P+   Y+I+I   CR G +  +      +L+ G  ++ +  N +L GLC  K + 
Sbjct: 91  SIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVG 150

Query: 223 EA-DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ---KSIKPDIVTY 278
           EA D L   M E G  PD  +++ L+ G C +    +AL L  +M     +S  P++VTY
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            T+IDG CK    ++A  ++  MI   + PN  +Y  LI+GY S+G   E  ++  +M  
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           +G+KP   +  +++   C     S+   FL  MV  G+ PD   +N   + + +   +DK
Sbjct: 271 RGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 327

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  + +KM   GL P+V+ Y  ++   C+ GR+ D+E+   +MI +G+ P+   + +L+ 
Sbjct: 328 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 387

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           G  + +  + A     EML +G  P+  F
Sbjct: 388 GLCTVDKWERAEELVYEMLDQGICPNAVF 416


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 246/453 (54%), Gaps = 1/453 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VNA    H  D A  FL  M  +G  P + T+N L+    R  + ++A+ + N +  K 
Sbjct: 95  VVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK- 153

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +    +++  +I G C+ G   +   +L  + + GLSP+   Y TL+   C+  N+  A+
Sbjct: 154 VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAK 213

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +FC+M+R G+ P+  ++S L+  F + G        +  MK +G+VP+   Y  +I+ Y
Sbjct: 214 NLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEY 273

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G V +A K+  EM EKG    V+TYN ++ GLCR K   EA  L +++ + G+ P+ 
Sbjct: 274 CNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNI 333

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G C    M+ A+ LF+ +    + P +VTYNTLI G+ KV  +  A  L  +
Sbjct: 334 VTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKE 393

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I+P+ ++Y ILI+ +  + H  +A  +   M   G+ P + + + ++ G C  G+
Sbjct: 394 MEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGN 453

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    +    + P+S+ YNT+I+G+ +E +  +A  L+++M   G+VP+V ++  
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCS 513

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            +   CR  +  ++EL+L +MI  GL P  S Y
Sbjct: 514 TIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/419 (31%), Positives = 220/419 (52%), Gaps = 1/419 (0%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y++++N        D+A   L  M+  G  P + T+N LL    R     +A  IF E+ 
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
            + V  D  SF  +I      G   +       ++  GL P+ V+YT +I+G C++G V+
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A  +  +M   G V +  TY+ ++NG  +  +  E   ++  M   G+ P+ Y +  LI
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
             +C DG ++KA  +F  M +K I   ++TYN LI G C+  +  +A KL   +    +S
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN ++Y ILING+C +  +  A RL+ ++   G+ PTLV+ NT+I GY +  + + A + 
Sbjct: 331 PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           + +M    + P  ++Y  LI+ F R  + +KA  + S ME  GLVPDV TY+V+L G C 
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCV 450

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            G M ++  +   + E  L P+   Y T+I+G+  + +   A R  +EM+Q G VP+ A
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVA 509



 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 225/422 (53%), Gaps = 4/422 (0%)

Query: 3   NALC---KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           N LC   + +  D A     E++ K V  D  ++  +I   C  G+  + F+L+  +   
Sbjct: 129 NLLCLLIRSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEF 187

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL P V  Y +LI+G CK G    AK +  +M ++GL P+  TY+ L+    ++    E 
Sbjct: 188 GLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREG 247

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++  M R G+ P+  +++ LI  +  +G +D+A   F EM+  G+    + Y I+I G
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR     EA+K+  ++ + G   ++VTYN ++NG C  + +  A  LFN++   G+ P 
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPT 367

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+ TLI G+ K  N+  AL+L   M ++ I P  VTY  LID F ++   EKA ++ +
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHS 427

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M    + P+  +Y +L++G C  G++ EA +L+  +    ++P  V  NT+I GYC+ G
Sbjct: 428 LMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEG 487

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
            + +A   L++MV  G+ P+  S+ + I    R+E   +A  L+ +M N GL P V  Y 
Sbjct: 488 SSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK 547

Query: 420 VI 421
           ++
Sbjct: 548 MV 549



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 229/455 (50%), Gaps = 1/455 (0%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           T  Y+T++NAY      ++A   ++ M  +G  P   T+N+L+  L +    D+A  + +
Sbjct: 89  TPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFN 148

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           E L+  +  D  ++  ++   C      +   +   +   G++P++V ++TLI    ++G
Sbjct: 149 E-LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDG 207

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            +  A   F +M   GLVP+   Y++++NG+ + G   E  +M + M   G V +   YN
Sbjct: 208 NVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYN 267

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +++  C   M+ +A  +F EM E+G+     T+  LI G C+     +A+ L   + + 
Sbjct: 268 CLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV 327

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            + P+IVTYN LI+GFC V +M+ A +L+  + S  +SP  ++Y  LI GY  + ++  A
Sbjct: 328 GLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L  EM  + I P+ V+   +I  + R     KA E  S M   G+ PD  +Y+ L++G
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHG 447

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                NM +A  L   +    L P+ + YN ++ G+C++G  + +  +L  M++ G+ P+
Sbjct: 448 LCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPN 507

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +++ + I         KEA     +M+  G  P 
Sbjct: 508 VASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 101/211 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   K+DSA     +++  G+ P  VTYNTLI  Y +   L  A  L+  M  + 
Sbjct: 339 LINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TY  LI+   +    ++A E+   M + GL PD  TY+ LL   C   NM EA 
Sbjct: 399 IAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEAS 458

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  +    + P+ V ++T+I  + + G   RAL    EM  +G+VP+   +   I   
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLL 518

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           CR+    EA  +  +M+  G    V  Y  +
Sbjct: 519 CRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 260/478 (54%), Gaps = 3/478 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K + A   L   ++KG  P  + YN ++    R+G +EEA +++ +M      P + +YN
Sbjct: 357 KFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSYN 415

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI+ LCK G  + A +V D M + GL P+  T N ++   C+ + + EA  IF  +  +
Sbjct: 416 ILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHK 475

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
              PD V+F +LI    R+G+++ A M + +M  +G  P+ V+YT +I  + + G   + 
Sbjct: 476 VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDG 535

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            K+  EM+ +GC  D++  N  ++ + +A  + +   LF E+  +G+ PD  +++ LIHG
Sbjct: 536 HKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
             K G       LF  M ++ +  D   YN +IDGFCK G++ KA +L  +M ++ + P 
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++YG +I+G   +  + EA+ L+ E   K +   +V  +++I G+ + G   +A   L 
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILE 715

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +++ +G+ P++ ++N L++  V+ E +D+A      M+N    P+ +TY++++ G C+  
Sbjct: 716 ELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKV- 774

Query: 430 RMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           R  +   + W+ ++K GL P+  TYTT+I+G     N+ EA    +     G +PD A
Sbjct: 775 RKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSA 832



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 248/469 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++++A      M++ G++P+ +T N +I+  C+   L+EA  +   +  K 
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV 476

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+ SLI+GL + G+ + A  + ++ML  G +P+   Y +L+    +     +  
Sbjct: 477 CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGH 536

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ EM  RG +PD++  +  +    + G++++    F E+K+ GL PD   Y+I+I+G 
Sbjct: 537 KIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGL 596

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF  +  K+  EM E+G  +D   YN +++G C++  + +A  L  EM  +G+ P  
Sbjct: 597 VKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTV 656

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I G  K   +++A  LF+    K++  ++V Y++LIDGF KVG +++A  +  +
Sbjct: 657 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEE 716

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + ++PN  ++  L++       + EA   +  M      P  V+ + ++ G C+   
Sbjct: 717 LMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRK 776

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M  +G+ P++I+Y T+I+G  R  N+ +A  L  + ++ G +PD   YN 
Sbjct: 777 FNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNA 836

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++ G     +  D+ ++      KG      T   L++     + L++A
Sbjct: 837 MIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 233/483 (48%), Gaps = 1/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV +  K  K+  A   +  M +    P    Y TLI A       +    L+  M   G
Sbjct: 173 MVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIG 232

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  V  + +LI    ++GR D A  +LDEM     + D   YN  +    +   +  A 
Sbjct: 233 YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAW 292

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F E+  +G+ PD V+F+++IG+  +  ++D A+  F E+ S   VP    Y  +I GY
Sbjct: 293 KFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGY 352

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G   EA  + +    KGC+  V+ YN IL  L R   + EA  +  E ++    P+ 
Sbjct: 353 GSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIL-EAMKMDAAPNL 411

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LI   CK G +  AL + D M +  + P+I+T N +ID  CK   +++A  ++  
Sbjct: 412 TSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLG 471

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  +P+ +++  LI+G    G V +A+ L+ +M+  G  P  V   ++I+ + + G 
Sbjct: 472 LDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGR 531

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                +   +M+  G  PD +  N  ++   +   ++K  AL  +++ QGL PDV +Y++
Sbjct: 532 KEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSI 591

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + G   D+  + + M E+GL+ D   Y  +I+G      + +A++  +EM  +G
Sbjct: 592 LIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG 651

Query: 481 FVP 483
             P
Sbjct: 652 LQP 654



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 202/418 (48%), Gaps = 1/418 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            YN+L+  + +    +  +++L+EM   G  P   T   ++    +   + EA  +   M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            +    P   +++TLIG  S   + D  L   R+M+  G      L+T +I  + R G V
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL + DEM       D+V YN  ++   +   +  A   F+E+  +G+ PD  TFT++
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I   CK   +++A+ LF+ +      P +  YNT+I G+  VG+  +A  L      +  
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I+Y  ++      G V EA R+  E +     P L S N +I   C++G+   A +
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRIL-EAMKMDAAPNLTSYNILIDMLCKAGELEAALK 432

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M   G+ P+ I+ N +I+   + + +D+A ++   ++++   PD +T+  ++ G  
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLG 492

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           R G+++D+ ++  +M++ G  P+   YT+LI         ++  + + EM+ RG  PD
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPD 550



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 61/151 (40%)

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM   G  P+  +C  ++  + +S    +A   +  M      P   +Y TLI       
Sbjct: 157 EMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAH 216

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
             D    L+ +M+  G    V  +  ++  F R+GR+  +  +L  M     N D   Y 
Sbjct: 217 EADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYN 276

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             I+       +  A++F  E+  +G VPDD
Sbjct: 277 VCIDCFGKVGKVDMAWKFFHELKSQGLVPDD 307


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/521 (29%), Positives = 260/521 (49%), Gaps = 40/521 (7%)

Query: 1   MVNALCK----DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM 56
           M+N  C+       I  A   L ++   G  P+ VTY T I   C+ G    A++L+ ++
Sbjct: 212 MMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNL 271

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
             K        +N++I GLC+ G  D A EV  EM   G+ PD  +Y+ L+   CRK  +
Sbjct: 272 CRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRV 331

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A E+F EM   G+ P+I S+S LI  F + G++D+AL  F EMK++G++PD   Y+I+
Sbjct: 332 DQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSIL 391

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I+G+CR G +  A+K  +EM           Y +++ G  ++K    A   F  M + G+
Sbjct: 392 IDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGM 451

Query: 237 FPDF-----------------------------------YTFTTLIHGHCKDGNMNKALN 261
           +PD                                    Y++   IH  C+     KAL 
Sbjct: 452 WPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQ 511

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L  +M ++++ PD+V Y+TLI  F K    EKA  L+  M    I+ N  +Y ILIN + 
Sbjct: 512 LLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFI 571

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
           S   +  A+RL+  M    + P  ++  +++ G+C +G+ ++A     +M  EG  P+ +
Sbjct: 572 SDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVV 631

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y   IN +++    ++A  L  KM+ +G+ PD I Y +++  FC  G M+ +E +   M
Sbjct: 632 TYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEM 691

Query: 442 IEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            ++G   P+   YT LIN ++  N   +A + ++EM  +G 
Sbjct: 692 KQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 240/448 (53%), Gaps = 1/448 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+   +D A     EM+  G+ PD  +Y+ LI+ +CR+G +++A ++   M   G
Sbjct: 286 VIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSG 345

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +++Y+ LI+G CK+GR D+A EV +EM   G+ PD  +Y+ L+   CRK +M  A 
Sbjct: 346 ILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAI 405

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + + EM+    +P   ++ +LI  + ++ Q   AL  FR M+  G+ PD +    I++ Y
Sbjct: 406 KFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIY 465

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR     +AL + ++  E G   +  +YN  ++ +CR  +  +A  L   ML+R V PD 
Sbjct: 466 CRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDV 525

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++TLI    K  N  KA+ LF  MT+  I  ++ TY  LI+ F    +M+ A +L+  
Sbjct: 526 VNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKG 585

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   ++ P+ I+Y  L+ G+C+ G +T A  L+ EM  +G  P +V+    I  Y +   
Sbjct: 586 MKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNK 645

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG-LVPDVITYN 419
            ++A +   KM   GV PD I Y  LI  F     M++A AL  +M+ +G   P+V+ Y 
Sbjct: 646 NNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYT 705

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLN 447
            ++  + +  +   +E +   M  KGL+
Sbjct: 706 CLINSYIKLNKRDQAEKLYEEMRAKGLS 733



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 229/464 (49%), Gaps = 4/464 (0%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           V    V ++ LI  +     LE A  +       G++  + + N L+  L +  R D  +
Sbjct: 132 VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVR 191

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCR----KENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
            + + +++ G  P+  TY  ++   CR      ++  A EI  ++   G  P++V++ T 
Sbjct: 192 LLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTY 251

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I    + G    A    + +       +N  +  +I G C+ G + EA ++  EM   G 
Sbjct: 252 IKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGI 311

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + DV +Y+ +++G CR   + +A ++F EM   G+ P+ Y+++ LI G CK+G ++KAL 
Sbjct: 312 LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALE 371

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +F+ M    I PD+ +Y+ LIDGFC+ G+M+ A K W +M S   SP+  +Y  LI GY 
Sbjct: 372 VFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYY 431

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
                  A + +  M   G+ P  ++CN I+  YCR  D +KA     K    GV  +  
Sbjct: 432 KSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPY 491

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           SYN  I+   R    +KA  L+  M  + ++PDV+ Y+ +++ F ++     + ++  +M
Sbjct: 492 SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKM 551

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            + G+  +  TYT LIN  +S   +  A+R    M +    PD 
Sbjct: 552 TKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQ 595



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 245/524 (46%), Gaps = 39/524 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++     +  ++ A       +  G+  + ++ N L+     +  ++    L   +   G
Sbjct: 142 LIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFG 201

Query: 61  LKPGVFTYNSLINGLCKKGRCD----RAKEVLDEMLQMGLSPDTATYNT----------- 105
            +P + TY  ++N  C+   C     RA E+L ++   G +P+  TY T           
Sbjct: 202 PRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLF 261

Query: 106 -----LLVESCRKEN-------------------MSEAEEIFCEMSRRGVAPDIVSFSTL 141
                L+   CRK                     + EA E+F EM   G+ PD+ S+S L
Sbjct: 262 GVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSIL 321

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I  F R G++D+A   F+EM+++G++P+   Y+I+I+G+C+ G V +AL++ +EM   G 
Sbjct: 322 IDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGI 381

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           + DV +Y+ +++G CR   +  A   + EM      P  + + +LI G+ K      AL 
Sbjct: 382 LPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALK 441

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
            F IM +  + PD +  N ++  +C+  +  KA  L        +  N  SY   I+  C
Sbjct: 442 EFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRIC 501

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
                 +A +L   M+ + + P +V+ +T+I  + +  ++ KA     KM   G+  +  
Sbjct: 502 RGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVK 561

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y  LIN F+ +  MD A+ L   M+   + PD I Y  ++ GFC  G M  +  +   M
Sbjct: 562 TYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEM 621

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             +G +P+  TYT  IN ++  N   +A + +++M +RG  PD 
Sbjct: 622 SREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQ 665



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 195/413 (47%), Gaps = 37/413 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+ ++D A     EM+  G+ PD  +Y+ LI+ +CR+G ++ A +    M+   
Sbjct: 356 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN 415

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA- 119
             P  F Y SLI G  K  +   A +    M ++G+ PDT   N +L   CRK + ++A 
Sbjct: 416 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKAL 475

Query: 120 --EEIFCE--------------------------------MSRRGVAPDIVSFSTLIGIF 145
              E F E                                M +R V PD+V++STLI  F
Sbjct: 476 ALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCF 535

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           ++    ++A+M F +M   G+  +   YTI+IN +  +  +  A ++   M E     D 
Sbjct: 536 AKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQ 595

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           + Y +++ G C    +T A  LF+EM   G  P+  T+T  I+ + K    N+A  L++ 
Sbjct: 596 IAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEK 655

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILINGYCSMG 324
           M ++ + PD + Y  LI  FC  GEM +A  L+ +M    + +PN + Y  LIN Y  + 
Sbjct: 656 MKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLN 715

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
              +A +L+ EM  KG+     S  ++ + +C      K  + L     +G+D
Sbjct: 716 KRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQVLKTGK-LGGRAKQGLD 767


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 238/439 (54%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           + QK   P  + +  ++ +  +         L   M   G+   + T + LIN   + G 
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              +  V   +L+ G  PD  T  TL+   C K ++ +A     ++   G   + VS+ T
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    + GQ   AL   R +    +  D V+Y  II+G C++  V +A     EM+ K 
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
               VVTYNT++ GLC    L +A  L ++M+   + P  YTF+ L+   CK+G + +A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           N+F +M +K +KP+IVTYN+L++G+C V E+ KA  ++  M    ++P+  SY I+I+G+
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +  V EA +L+ EM  K I P +V+ N++I G C+SG  S A + + +M   G  P+ 
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI 419

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           I+YN+L++   +  ++DKA  L++K+++  + P V TYN+++ G C+ GR+ D++ +   
Sbjct: 420 ITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFED 479

Query: 441 MIEKGLNPDRSTYTTLING 459
           ++  G N D  TY T+I G
Sbjct: 480 VLVNGYNIDVYTYNTMIKG 498



 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 207/371 (55%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +KG  PD +T  TLI   C +G + +A    + +   G +    +Y +LINGLCK G+  
Sbjct: 132 KKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTK 191

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A E+L  +    +  D   YNT++   C+ + +++A + + EM  + + P +V+++TLI
Sbjct: 192 AALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLI 251

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
                 GQL  A+    +M    + P    ++I+++ +C+ G V EA  +   M++K   
Sbjct: 252 CGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVK 311

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            ++VTYN+++NG C    + +A+ +FN M + GV PD ++++ +I G CK   +++A+ L
Sbjct: 312 PNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKL 371

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M  K I PD+VTYN+LIDG CK G +  A KL  +M  R   PN I+Y  L++  C 
Sbjct: 372 FEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCK 431

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
             HV +A  L  ++    I+P++ + N +I G C+SG    A +    ++  G + D  +
Sbjct: 432 NHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYT 491

Query: 383 YNTLINGFVRE 393
           YNT+I GF ++
Sbjct: 492 YNTMIKGFCKK 502



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 205/392 (52%)

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           Q   +P    +  +L    +  + S    +  +M   G+A ++V+ S LI  FS+ G   
Sbjct: 62  QKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNS 121

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            +   F  +   G  PD +  T +I G C  G + +AL   D++L  G  ++ V+Y T++
Sbjct: 122 LSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLI 181

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           NGLC+      A ++   +  + V  D   + T+I G CKD  +N A + +  M  K I 
Sbjct: 182 NGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRIC 241

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P +VTYNTLI G C +G+++ A  L   MI   I+P   ++ IL++ +C  G V EA  +
Sbjct: 242 PTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNV 301

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           +  M+ K +KP +V+ N+++ GYC   + +KA+   + M   GV PD  SY+ +I+GF +
Sbjct: 302 FVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCK 361

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
            + +D+A  L  +M  + + PDV+TYN ++ G C+ GR+  +  ++  M ++G  P+  T
Sbjct: 362 IKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIIT 421

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y +L++     +++ +A     ++      P 
Sbjct: 422 YNSLLDALCKNHHVDKAIELLTKLKDHNIQPS 453



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 194/333 (58%), Gaps = 2/333 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +  +A   L  ++ K V  D V YNT+I+  C++  + +AF   + M  K 
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LI GLC  G+   A  +L +M+   ++P   T++ L+   C++  + EA+
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M ++ V P+IV++++L+  +    ++++A   F  M   G+ PD   Y+I+I+G+
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA+K+ +EM  K    DVVTYN++++GLC++  ++ A  L  EM +RG  P+ 
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI 419

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+   CK+ +++KA+ L   +   +I+P + TYN LI+G CK G ++ A K++ D
Sbjct: 420 ITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFED 479

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           ++    + +  +Y  +I G+C  G V   F  W
Sbjct: 480 VLVNGYNIDVYTYNTMIKGFCKKGFVIPQF--W 510



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 193/359 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC    I  A  F  ++   G   + V+Y TLIN  C+ G  + A +++  + GK 
Sbjct: 145 LIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKL 204

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V  YN++I+G+CK    + A +   EM+   + P   TYNTL+   C    + +A 
Sbjct: 205 VRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAI 264

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M    + P + +FS L+  F + G++  A   F  M    + P+ V Y  ++NGY
Sbjct: 265 GLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGY 324

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V +A  + + M + G   DV +Y+ +++G C+ KM+ EA  LF EM  + +FPD 
Sbjct: 325 CLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDV 384

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI G CK G ++ AL L   M  +   P+I+TYN+L+D  CK   ++KA +L   
Sbjct: 385 VTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTK 444

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +    I P+  +Y ILING C  G + +A +++ +++  G    + + NT+IKG+C+ G
Sbjct: 445 LKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 191/359 (53%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           + ++   P I+ F  ++G   +       +   R+M+  G+  + V  +I+IN + + G 
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
              +  +   +L+KG   D +T  T++ GLC    + +A    +++L  G   +  ++ T
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI+G CK G    AL +   +  K ++ D+V YNT+IDG CK   +  A   +++M++++
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I P  ++Y  LI G C MG + +A  L ++M+ + I PT+ + + ++  +C+ G   +A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
                M+ + V P+ ++YN+L+NG+     ++KA ++ + M   G+ PDV +Y+++++GF
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+   + ++  +   M  K + PD  TY +LI+G      +  A +   EM  RG  P+
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPN 418



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 2/258 (0%)

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
              N +     F  + +F+     + +  N+  + N   ++ QK+  P I+ +  ++   
Sbjct: 22  QFLNPIFLIHCFTSYSSFSNSTTLYSQLHNLVSSFN--HLLHQKNPTPSIIQFGKILGSL 79

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
            K         L   M    I+ N ++  ILIN +  +GH + +F ++  ++ KG +P  
Sbjct: 80  VKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDA 139

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++  T+IKG C  GD  KA  F  K+++ G   + +SY TLING  +      A  ++ +
Sbjct: 140 ITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRR 199

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ++ + +  DV+ YN I+ G C+   ++D+      M+ K + P   TY TLI G      
Sbjct: 200 IDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQ 259

Query: 466 LKEAFRFHDEMLQRGFVP 483
           LK+A     +M+     P
Sbjct: 260 LKDAIGLLHKMILENINP 277


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 136/376 (36%), Positives = 217/376 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+  ++  A   L +M + G  P  VT+ +L++ +C    + +AF L+  M   G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN+LI+GLCK G  + A E+L+EM + GL  D  TYNTLL   C     S+A 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +R + PD+V+F+ LI +F + G LD A   ++EM  + + P+NV Y  IING 
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + +A K  D M  KGC  +VVTYNT+++G C+ +M+ E   LF  M   G   D 
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ TLIHG+C+ G +  AL++F  M  + + PDI+T+  L+ G C  GE+E A   + D
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   +     ++Y I+I+G C    V +A+ L+  +  +G+KP   +   +I G C++G 
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471

Query: 361 ASKADEFLSKMVSEGV 376
             +ADE + +M  EG+
Sbjct: 472 RREADELIRRMKEEGI 487



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 224/443 (50%), Gaps = 9/443 (2%)

Query: 42  REGFL-----EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL 96
           R GFL     E+AF L   M      P +  +  L+       R +       +M   G+
Sbjct: 43  RTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGI 102

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           S D  ++  L+   CR   +S A  +  +M + G  P IV+F +L+  F    ++  A  
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
               M  +G  P+ V+Y  +I+G C+NG +  AL++ +EM +KG   DVVTYNT+L GLC
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
            +   ++A  +  +M++R + PD  TFT LI    K GN+++A  L+  M Q S+ P+ V
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TYN++I+G C  G +  A K +  M S+   PN ++Y  LI+G+C    V E  +L+  M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
             +G    + + NT+I GYC+ G    A +    MVS  V PD I++  L++G      +
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           + A      M        ++ YN+++ G C+  ++  +  +  R+  +G+ PD  TYT +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462

Query: 457 INGHVSQNNLKEAFRFHDEMLQR 479
           I G       +EA    DE+++R
Sbjct: 463 ILGLCKNGPRREA----DELIRR 481



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 224/412 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A     + ++   F  +ME  G+  D  ++  LI+ +CR   L  A  ++  M   G
Sbjct: 77  LLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG 136

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T+ SL++G C   R   A  ++  M++ G  P+   YNTL+   C+   ++ A 
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM ++G+  D+V+++TL+     +G+   A    R+M    + PD V +T +I+ +
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA ++  EM++     + VTYN+I+NGLC    L +A   F+ M  +G FP+ 
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G CK   +++ + LF  M+ +    DI TYNTLI G+C+VG++  A  ++  
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+SR+++P+ I++ IL++G C  G +  A   + +M        +V+ N +I G C++  
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
             KA E   ++  EGV PD+ +Y  +I G  +     +A  L+ +M+ +G++
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 228/455 (50%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           + + A     EM      P  V +  L+ A       E        M   G+   ++++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI+  C+  R   A  VL +M+++G  P   T+ +LL   C    + +A  +   M + 
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  P++V ++TLI    +NG+L+ AL    EM+  GL  D V Y  ++ G C +G   +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            +M  +M+++    DVVT+  +++   +   L EA +L+ EM++  V P+  T+ ++I+G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C  G +  A   FD+M  K   P++VTYNTLI GFCK   +++  KL+  M     + +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y  LI+GYC +G +  A  ++  MV + + P +++   ++ G C +G+   A     
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M         ++YN +I+G  + + ++KA+ L  ++  +G+ PD  TY +++ G C+ G
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
              +++ ++ RM E+G+    +     +  H S N
Sbjct: 471 PRREADELIRRMKEEGIICQMNAEDDHLEEHSSSN 505



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 204/414 (49%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L  G     R + A  +  EM+     P    +  LL  +              +M   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           ++ D+ SF+ LI  F R  +L  AL    +M   G  P  V +  +++G+C    + +A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +   M++ G   +VV YNT+++GLC+   L  A +L NEM ++G+  D  T+ TL+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C  G  + A  +   M ++SI PD+VT+  LID F K G +++A +L+ +MI   + PN 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  +ING C  G + +A + +  M  KG  P +V+ NT+I G+C+     +  +   +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  EG + D  +YNTLI+G+ +   +  A  +   M ++ + PD+IT+ ++L G C  G 
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  + +    M E         Y  +I+G    + +++A+     +   G  PD
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPD 455



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 118/228 (51%)

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  LF  M      P IV +  L+     +   E        M    IS +  S+ ILI+
Sbjct: 55  AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            +C    ++ A  +  +M+  G +P++V+  +++ G+C       A   +  MV  G +P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           + + YNTLI+G  +   ++ A  L+++ME +GL  DV+TYN +LTG C  GR  D+  +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             M+++ +NPD  T+T LI+  V Q NL EA   + EM+Q    P++ 
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 242/449 (53%), Gaps = 1/449 (0%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           ++ ++   G L+EA +++  M  +GL P   T N +I    + G  + A+ + +EM   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           + PD+ +Y  ++V  C+  N+ EA++    M  RG   D  +F+ +I  FS  G   RAL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            YFR +   GL P+ + +T +I G C+ G + +A +M +EM+ KG   +V T+ ++++GL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 216 CRAKMLTEADDLFNEMLE-RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           C+     +A  LF +++      P+  T+T +I G+C++  +N+A  L   M ++ + P+
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
             TY TLIDG CK G  E+A  L   M S   SPN  +Y  ++NG C  G V EA+++  
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           +    G+KP   + N ++  +C+  +  +A    +KM+  G+ PD  SY TLI  F RE 
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            M ++     +    G++P   TY  ++ G+CR+G +  +     R+ + G  PD  TY 
Sbjct: 501 RMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYG 560

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +I+G   Q+   EA   +D M+++G VP
Sbjct: 561 AIISGLCKQSKRDEARSLYDSMIEKGLVP 589



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 222/416 (53%), Gaps = 1/416 (0%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           ++    + GR   A E++ EM   GL P+T T N ++  +     +  AE +F EM  RG
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           V PD +S+  ++ ++ + G +  A  +   M   G V DN  +T+II+ +   G+   AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
                +++ G   +++ +  ++ GLC+   + +A ++  EM+ +G  P+ YT T+LI G 
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 251 CKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           CK G   KA  LF  ++  ++ KP+++TY  +I G+C+  ++ +A  L + M  + + PN
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y  LI+G+C  G+   A+ L   M  +G  P L + N I+ G C+ G   +A + L 
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
                G+ PD  +YN L++   ++EN+ +A AL +KM   G+ PD+ +Y  ++  FCR+ 
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           RM +SE+     +  G+ P   TYT++I G+  + NL  A +F   +   G  PD 
Sbjct: 501 RMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDS 556



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/252 (40%), Positives = 161/252 (63%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++  C++ K++ A+M L  M+++G+ P+T TY TLI+ +C+ G  E A+ LMN MS +G
Sbjct: 352 MISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEG 411

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN+++NGLCK+GR   A ++L++  Q GL PD  TYN L+ E C++EN+ +A 
Sbjct: 412 FSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQAL 471

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M + G+ PDI S++TLI +F R  ++  + M+F E    G++P N  YT +I GY
Sbjct: 472 ALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGY 531

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A+K    + + GC  D +TY  I++GLC+     EA  L++ M+E+G+ P  
Sbjct: 532 CREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCE 591

Query: 241 YTFTTLIHGHCK 252
            T  TL + +CK
Sbjct: 592 VTRITLAYEYCK 603



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 219/418 (52%), Gaps = 1/418 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ++ A++   EM  +GV PD+++Y  ++  YC+ G + EA + ++ M  +G      T+  
Sbjct: 186 VEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTL 245

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +I+    KG   RA      ++ MGL P+   +  ++   C++ ++ +A E+  EM  +G
Sbjct: 246 IISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKG 305

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
             P++ + ++LI    + G  ++A  ++ + ++S    P+ + YT +I+GYCR   +  A
Sbjct: 306 WKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRA 365

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             +   M E+G V +  TY T+++G C+A     A DL N M   G  P+  T+  +++G
Sbjct: 366 EMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNG 425

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK G + +A  + +   Q  +KPD  TYN L+   CK   + +A  L+  M+   I P+
Sbjct: 426 LCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             SY  LI  +C    + E+   + E V  GI PT  +  ++I GYCR G+ + A +F  
Sbjct: 486 IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFH 545

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           ++   G  PDSI+Y  +I+G  ++   D+A +L   M  +GLVP  +T   +   +C+
Sbjct: 546 RLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 177/322 (54%), Gaps = 1/322 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           M+  LCK   I  A   L EM  KG  P+  T+ +LI+  C++G+ E+AF+L +  +  +
Sbjct: 281 MIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSE 340

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             KP V TY ++I+G C++ + +RA+ +L  M + GL P+T TY TL+   C+  N   A
Sbjct: 341 NHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERA 400

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++   MS  G +P++ +++ ++    + G++  A     +    GL PD   Y I+++ 
Sbjct: 401 YDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSE 460

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   + +AL + ++ML+ G   D+ +Y T++   CR   + E++  F E +  G+ P 
Sbjct: 461 HCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPT 520

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T++I G+C++GN+  A+  F  ++     PD +TY  +I G CK  + ++A  L+ 
Sbjct: 521 NKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYD 580

Query: 300 DMISRKISPNYISYGILINGYC 321
            MI + + P  ++   L   YC
Sbjct: 581 SMIEKGLVPCEVTRITLAYEYC 602



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%)

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           ++  F     + +A  +V +M NQGLVP+  T N I+      G +  +EL+   M  +G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + PD  +Y  ++  +    N+ EA ++   ML+RGFV D+A
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNA 241


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 151/466 (32%), Positives = 248/466 (53%), Gaps = 2/466 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM  KG Y D   Y+ +I A  R G   +A +L + M+G G+KP    Y   I+GLCK  
Sbjct: 175 EMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLR 234

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVSF 138
             DRA +VL +M + G  P   TY++++    +   M EA  +  +M    G   D+V  
Sbjct: 235 DADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLA 294

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + L+  +  +G++ +AL  F E+ S G+ P NV Y ++I G    G   E  K+  +M+E
Sbjct: 295 TMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIE 354

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
           +G ++    +N ++ GL R K   +A  L   +++ GV PD +T+  LIH  CK   +++
Sbjct: 355 QGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHE 413

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+NL+D M +  +KP IVTY++L+ G+C+ G M++A KL+++M  +   PN ++Y  L+ 
Sbjct: 414 AVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMK 473

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           GY        A+ L  EM   G+     + N +I G        + DE L + +SEG  P
Sbjct: 474 GYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVP 533

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
            +++YN++INGFV+   M  AF +  +M  +G+ P+++TY   + G+CR      +  +L
Sbjct: 534 TTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL 593

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +   G+ PD + Y   I+    Q N+  A  F   +L+ G  PD
Sbjct: 594 IYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPD 639



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 244/485 (50%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   ++  A     E+   GV P  VTY  LI     EG  +E ++L   M  +G
Sbjct: 297 LMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQG 356

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L    + +N +I GL +  R   A  +L+ ++  G+ PD  TY  L+   C+ + + EA 
Sbjct: 357 LLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAV 415

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +M   GV P IV++ +L+  +   G++D AL  + EM   G  P+ V YT ++ GY
Sbjct: 416 NLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGY 475

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      A  + +EM + G      TYN ++NGL     + E D++    L  G  P  
Sbjct: 476 IKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTT 535

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I+G  K G M  A  ++  M +K I P+IVTY + IDG+C+    + A KL   
Sbjct: 536 MTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    I P+  +Y   I+ +C  G+++ A      ++  G+ P +   N+ + GY     
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKM 655

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +F   M+ + V  D+  Y TLI+GF +  N+  A  L S+M    ++PD  T+  
Sbjct: 656 MAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTA 715

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  G CR G +  ++ +L  M    ++P+  TY  LIN  V    L+EAF+ HDEML  G
Sbjct: 716 LTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSG 775

Query: 481 FVPDD 485
            VPDD
Sbjct: 776 VVPDD 780



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 233/440 (52%), Gaps = 2/440 (0%)

Query: 18  LC-EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           LC +M ++G+   T  +N +I    R+   ++A  L+  +   G+ P VFTY  LI+ LC
Sbjct: 348 LCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLC 406

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K  +   A  + D+M + G+ P   TY++LL+  C K  M EA +++ EM  +G  P+ V
Sbjct: 407 KHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEV 466

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TL+  + +    D A     EM+  G+   +  Y I+ING      V E  +M    
Sbjct: 467 TYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRF 526

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           L +G V   +TYN+I+NG  +A M+  A  ++ +M ++G+ P+  T+T+ I G+C+    
Sbjct: 527 LSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A+ L   + +  I+PDI  YN  ID FCK G M +A      ++   ++P+   Y   
Sbjct: 587 DLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + GY ++  + EA + +Y M+ + +        T+I G+ + G+ + A E  S+M++  V
Sbjct: 647 VTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHV 706

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD  ++  L +G  R  ++D A  L+  M    + P+++TYN+++    R G++ ++  
Sbjct: 707 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQ 766

Query: 437 ILWRMIEKGLNPDRSTYTTL 456
           +   M+  G+ PD +TY  L
Sbjct: 767 LHDEMLSSGVVPDDTTYDIL 786



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 229/469 (48%), Gaps = 4/469 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            M  +GV PD  +   L+    R     +A  L + M GKG       Y+ +I    + G
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 80  -RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
             CD A  + DEM   G+ PD   Y   +   C+  +   A ++  +M   G  P  +++
Sbjct: 200 MHCD-AVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 139 STLIGIFSRNGQLDRALMYFREMKSA-GLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           S+++ +  + G++D AL    +M  A G   D VL T++++GYC +G V +AL + DE++
Sbjct: 259 SSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVV 318

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G     VTY  ++ G     M  E   L  +M+E+G+    Y F  +I G  +D    
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWK 378

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            A+ L +++    + PD+ TY  LI   CK  ++ +A  LW  M    + P+ ++Y  L+
Sbjct: 379 DAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
            GYC  G + EA +L+ EM  KG  P  V+  T++KGY +      A   L++M   GV 
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
               +YN LING      + +   ++ +  ++G VP  +TYN I+ GF + G M  +  +
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +M +KG+ P+  TYT+ I+G+   N    A +    + + G  PD A
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIA 606



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 198/386 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K+  A     +M++ GV P  VTY++L+  YC +G ++EA +L + M  KG
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY +L+ G  KK   D A  +L+EM Q G+S    TYN L+        + E +
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+       G  P  ++++++I  F + G +  A   +R+M+  G+ P+ V YT  I+GY
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR      A+K+   +   G   D+  YN  ++  C+   ++ A      +L+ G+ PD 
Sbjct: 581 CRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDV 640

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + + + G+     M +A   +  M ++ +  D   Y TLIDGF KVG +  A +L+++
Sbjct: 641 TVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSE 700

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++  + P+  ++  L +G C  G +  A RL  +M    + P +V+ N +I    R G 
Sbjct: 701 MMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGK 760

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTL 386
             +A +   +M+S GV PD  +Y+ L
Sbjct: 761 LQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 185/359 (51%), Gaps = 2/359 (0%)

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           +  M  RGV PD  S + L+   +R      AL  F EM+  G   D  +Y ++I    R
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G   +A+++ DEM   G   D   Y   ++GLC+ +    A  +  +M E G  P   T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKP-DIVTYNTLIDGFCKVGEMEKANKLWADM 301
           +++++    K G M++AL L D M   + K  D+V    L+ G+C  GE+ KA  L+ ++
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +S  ++P  ++YG+LI G  + G   E ++L  +M+ +G+  +    N +IKG  R    
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A   L  +V  GV PD  +Y  LI+   + + + +A  L  KM+  G+ P ++TY+ +
Sbjct: 378 KDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           L G+C +GRM ++  +   M +KG  P+  TYTTL+ G++ +     A+   +EM Q G
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNG 495



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 2/116 (1%)

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           S+MV+ GV PD+ S   L+    R  +   A  L  +M  +G   D   Y+V++   C +
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRA-CVR 197

Query: 429 GRMH-DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G MH D+  +   M   G+ PD   Y   I+G     +   A +   +M + GF P
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEP 253


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 257/464 (55%), Gaps = 7/464 (1%)

Query: 12  DSAKMFLC--EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           DS K +    EM  + + PD VTY+++I A C+   +++A +++ SM   G+ P   TY 
Sbjct: 211 DSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYT 270

Query: 70  SLINGLCKKGRCDRA----KEVLDEMLQM-GLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           S+++G C  G+   A    K+V  + ++  GL PD ATY TLL     K  +     +  
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLD 330

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            M R G+ PD   ++ LI  +++ G++D A++ F +M+  GL PD V Y  +I   C++G
Sbjct: 331 LMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSG 390

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V +A+   ++M+++G     + YN++++GLC       A++L  EML+RG+  +   F 
Sbjct: 391 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 450

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           ++I  HCK+G + ++  LFD+M +  +KPDI+TY+TLIDG+C  G+M++A KL + M+S 
Sbjct: 451 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSV 510

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN ++Y  LINGYC +  + +A  L+ EM   G+ P +++ N I++G  ++   + A
Sbjct: 511 GLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 570

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E   ++   G   +  +YN +++G  + +  D A  +   +    L  +  T+N+++  
Sbjct: 571 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 630

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
             + GR  +++ +       GL P+  TY  +    + Q  L+E
Sbjct: 631 LLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 674



 Score =  244 bits (622), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 246/489 (50%), Gaps = 9/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++   C+  ++D     L  + +KG   + +T+  L+   C +    +A  + +  M+  
Sbjct: 93  LIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ---MGLSPDTATYNTLLVESCRKENM 116
              P VF+   L+ GLC + R   A E+   M      G +PD  +Y T++    ++ + 
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A   + EM  R ++PD+V++S++I    +   +D+A+     M   G++P+   YT I
Sbjct: 213 GKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSI 272

Query: 177 INGYCRNGFVLEAL----KMRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           ++GYC +G   EA+    K+R + +E  G   D+ TY T+L G      L     L + M
Sbjct: 273 MHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLM 332

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           +  G+ PD Y +  LI  + K G +++A+ +F  M Q+ + PD VTY  +I   CK G +
Sbjct: 333 VRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRV 392

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           E A   +  MI   +SP  I Y  LI+G C+      A  L  EM+ +GI    +  N+I
Sbjct: 393 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 452

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I  +C+ G   ++++    MV  GV PD I+Y+TLI+G+     MD+A  L+S M + GL
Sbjct: 453 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGL 512

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            P+ +TY  ++ G+C+  RM D+ ++   M   G++PD  TY  ++ G         A  
Sbjct: 513 KPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 572

Query: 472 FHDEMLQRG 480
            +  + + G
Sbjct: 573 LYVRITESG 581



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 250/526 (47%), Gaps = 79/526 (15%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK-------- 77
           V P   TY  LI   CR   L+  F  + ++  KG +    T+  L+ GLC         
Sbjct: 83  VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 78  -----------------------KGRCD--RAKEVLDEMLQM------GLSPDTATYNTL 106
                                  KG CD  R++E L+    M      G +PD  +Y T+
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
           +    ++ +  +A   + EM  R ++PD+V++S++I    +   +D+A+     M   G+
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262

Query: 167 VPDNVLYTIIINGYCRNGFVLEAL----KMRDEMLEK-GCVMDVVTYNTILNGLCRAKML 221
           +P+   YT I++GYC +G   EA+    K+R + +E  G   D+ TY T+L G      L
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT---- 277
                L + M+  G+ PD Y +  LI  + K G +++A+ +F  M Q+ + PD VT    
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAV 382

Query: 278 -------------------------------YNTLIDGFCKVGEMEKANKLWADMISRKI 306
                                          YN+LI G C   + E+A +L  +M+ R I
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
             N I +  +I+ +C  G V E+ +L+  MV  G+KP +++ +T+I GYC +G   +A +
Sbjct: 443 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMK 502

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            LS MVS G+ P++++Y TLING+ +   M  A  L  +ME+ G+ PD+ITYN+IL G  
Sbjct: 503 LLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLF 562

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           +  R   ++ +  R+ E G   + STY  +++G        +A R 
Sbjct: 563 QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRM 608



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 202/374 (54%), Gaps = 1/374 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K  K+D A +   +M Q+G+ PD VTY  +I   C+ G +E+A      M  +G
Sbjct: 347 LICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 406

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L PG   YNSLI+GLC   + +RA+E++ EML  G+  +T  +N+++   C++  + E+E
Sbjct: 407 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 466

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M R GV PDI+++STLI  +   G++D A+     M S GL P+ V Y  +INGY
Sbjct: 467 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGY 526

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +AL +  EM   G   D++TYN IL GL + +    A +L+  + E G   + 
Sbjct: 527 CKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 586

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++HG CK+   + AL +F  +    +K +  T+N +ID   KVG   +A  L+  
Sbjct: 587 STYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVA 646

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
             S  + PNY +Y ++       G + E  +L+  M   G        N I++   + G+
Sbjct: 647 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 706

Query: 361 ASKADEFLSKMVSE 374
            ++A  +LS M+ E
Sbjct: 707 ITRAGTYLS-MIDE 719



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 245/515 (47%), Gaps = 41/515 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLM-----NS 55
           ++ ALCK   +D A   L  M + GV P+  TY ++++ YC  G  +EA   +     + 
Sbjct: 237 IIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDG 296

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           +   GL+P + TY +L+ G   KG       +LD M++ G+ PD   YN L+    ++  
Sbjct: 297 VEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGK 356

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + EA  +F +M ++G+ PD V++  +IGI  ++G+++ A++YF +M   GL P N++Y  
Sbjct: 357 VDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 416

Query: 176 IING-----------------------------------YCRNGFVLEALKMRDEMLEKG 200
           +I+G                                   +C+ G V+E+ K+ D M+  G
Sbjct: 417 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 476

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D++TY+T+++G C A  + EA  L + M+  G+ P+  T+ TLI+G+CK   M  AL
Sbjct: 477 VKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDAL 536

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            LF  M    + PDI+TYN ++ G  +      A +L+  +          +Y I+++G 
Sbjct: 537 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 596

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C      +A R++  +    +K    + N +I    + G   +A +      S G+ P+ 
Sbjct: 597 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNY 656

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +Y  +    + +  +++   L   ME+ G   D    N I+    ++G +  +   L  
Sbjct: 657 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSM 716

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           + EK  + + ST +  I+  +S    +E  RF  E
Sbjct: 717 IDEKHFSLEASTASLFID-LLSGGKYQEYHRFLPE 750



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 206/416 (49%), Gaps = 13/416 (3%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG---VAPDIVSFST 140
           A+ V DE+L+ G        N  L +  R  + + A   +  M+R G   V P + +++ 
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAI 92

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM-RDEMLEK 199
           LIG   R  +LD        +   G   + + +T ++ G C +    +A+ +    M E 
Sbjct: 93  LIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER---GVFPDFYTFTTLIHGHCKDGNM 256
            C+ DV +   +L GLC      EA +L + M +    G  PD  ++TT+I+G  K+G+ 
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            KA + +  M  + I PD+VTY+++I   CK   M+KA ++   M+   + PN  +Y  +
Sbjct: 213 GKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSI 272

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPT-----LVSCNTIIKGYCRSGDASKADEFLSKM 371
           ++GYCS G   EA     ++   G++P      + +  T+++GY   G        L  M
Sbjct: 273 MHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLM 332

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           V  G+ PD   YN LI  + ++  +D+A  + SKM  QGL PD +TY  ++   C+ GR+
Sbjct: 333 VRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRV 392

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            D+ L   +MI++GL+P    Y +LI+G  + N  + A     EML RG   +  F
Sbjct: 393 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 448


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 246/491 (50%), Gaps = 22/491 (4%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++   K  L  M  +G YP    +N+L++AYC+      A++L+  M     KPG   YN
Sbjct: 358 QLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYN 417

Query: 70  SLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            LI  +C  G        + A++  +EML  G   +     +     C      +A ++ 
Sbjct: 418 ILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVI 477

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM   G  PD  ++S +IG      +++ A   F+EMK  G+VPD   YTI+I+ + + 
Sbjct: 478 HEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKA 537

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +A    DEM+  GC   VVTY T+++   +AK ++ A++LF  M+ +G FP+  T+
Sbjct: 538 GIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597

Query: 244 TTLIHGHCKDGNMNKALNL----------------FDIMTQKSIKPDIVTYNTLIDGFCK 287
           T LI G+CK GN+ KA  +                F I    + KP++VTY  L+DG CK
Sbjct: 598 TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
             +++ A  L   M      PN I Y  LI+G+C    + EA  ++++MV +G  P + +
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYT 717

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            +++I    +        + LSKM+     P+ + Y  +I+G  +    D+A+ L+  ME
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME 777

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G  P+V+TY  ++ GF + G++     +   M  KG  P+  TYT LIN   +  +L 
Sbjct: 778 EKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837

Query: 468 EAFRFHDEMLQ 478
           EA+   +EM Q
Sbjct: 838 EAYALLEEMKQ 848



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 249/498 (50%), Gaps = 20/498 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K + A   + EM   G  PDT TY+ +I   C    +E AF L   M G G+ P 
Sbjct: 464 LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPD 523

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  LI+   K G   +A   LDEM++ G  P   TY TL+    + + +S A E+F 
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M  +G  P++++++ LI  + ++G +++A                 MYF+   +    P
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKP 643

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +++G C+   V +A  + + M   GC  + + Y+ +++G C+A  L EA ++F
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
           ++M+ERG  P+ YT+++LI    KD  ++  L +   M + S  P+IV Y  +IDG  KV
Sbjct: 704 HKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            + ++A KL   M  +   PN ++Y  +I+G+   G V +   L+ EM  KG  P  V+ 
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C +G   +A   L +M          SY  +I G+ RE  +  +  L+ ++E 
Sbjct: 824 TVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEK 881

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN--PDRSTYTTLINGHVSQNNL 466
            G  P ++ Y V++  F + GR+  +  +   +I   ++    ++ YT+LI      + +
Sbjct: 882 NGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKI 941

Query: 467 KEAFRFHDEMLQRGFVPD 484
             AF    +M++ G +PD
Sbjct: 942 DHAFELFYDMIRDGVIPD 959



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 244/505 (48%), Gaps = 25/505 (4%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
             ALCK  K   A   L  +E++   P+T+ YN +I+  C   F EEA   +N M     
Sbjct: 283 AQALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSC 339

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P V TY  L+ G   K +  R K +L  M+  G  P    +N+L+   C+ ++ S A +
Sbjct: 340 IPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYK 399

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY------FREMKSAGLVPDNVLYTI 175
           +  +M +    P  V ++ LIG     G+L   + +      + EM SAG V + V    
Sbjct: 400 LLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVS 459

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
                C  G   +A K+  EM+  G V D  TY+ ++  LC A  +  A  LF EM   G
Sbjct: 460 FARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           V PD YT+T LI    K G + +A N  D M +   +P +VTY TLI  + K  ++  AN
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK---------------- 339
           +L+  MI++   PN I+Y  LI+GYC  G++ +A +++  M G                 
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
             KP +V+   ++ G C++     A + L  M  +G +P++I Y+ LI+GF +   +D+A
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             +  KM  +G  P+V TY+ ++    +  R+     +L +M+E    P+   YT +I+G
Sbjct: 700 QEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
                   EA++    M ++G  P+
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPN 784



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 208/420 (49%), Gaps = 20/420 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K  K+  A      M  KG +P+ +TY  LI+ YC+ G +E+A Q+   M G  
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDA 624

Query: 61  ----------------LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                            KP V TY +L++GLCK  +   A+++L+ M   G  P+T  Y+
Sbjct: 625 DIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYD 684

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   + EA+E+F +M  RG  P++ ++S+LI    ++ +LD  L    +M   
Sbjct: 685 ALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN 744

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V+YT +I+G  +     EA K+   M EKGC  +VVTY  +++G  +A  + + 
Sbjct: 745 SCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKC 804

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            +LF EM  +G  P+F T+T LI+  C  G++++A  L + M Q      + +Y  +I+G
Sbjct: 805 LELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEG 864

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           + +  E   +  L  ++     +P  + Y +LI+ +   G +  A  L  E++   +  T
Sbjct: 865 YKR--EFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMT 922

Query: 345 LVS--CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
                  ++I  +  +     A E    M+ +GV PD  ++  L+ G +R    ++A  L
Sbjct: 923 AKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 207/477 (43%), Gaps = 9/477 (1%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
            K FL    Q G       Y  L++ + R  +     + +  + G   +      N LI 
Sbjct: 155 VKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIR 214

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
             C+ G  + A E L  +   G  P   TYN L+    R + +  A+ +  EMS  G++ 
Sbjct: 215 KCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSM 274

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D  +         + G+   AL     ++    VP+ +LY  +I+G C   F  EA+   
Sbjct: 275 DEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEEAMDFL 331

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           + M    C+ +V TY  +L G    K L     + + M+  G +P +  F +L+H +CK 
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS 391

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM------EKANKLWADMISRKIS 307
            + + A  L   M +   KP  V YN LI   C  GE+      E A K + +M+S    
Sbjct: 392 DDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTV 451

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            N ++        C  G   +A+++ +EM+G G  P   + + +I   C +     A   
Sbjct: 452 LNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M   GV PD  +Y  LI+ F +   + +A   + +M   G  P V+TY  ++  + +
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++  +  +   MI KG  P+  TYT LI+G+    N+++A + +  M     +PD
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD 628



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 4/273 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L KD ++D     L +M +    P+ V Y  +I+   +    +EA++LM  M  KG
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY ++I+G  K G+ D+  E+  EM   G +P+  TY  L+   C   ++ EA 
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM +      + S+  +I  + R   L   L+   E++  G  P  +LY ++I+ +
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLL--EEVEKNGSAPTILLYKVLIDNF 898

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVT--YNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            + G +  AL++  E++     M      Y +++     A  +  A +LF +M+  GV P
Sbjct: 899 VKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIP 958

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           D  TF  L+ G  +     +AL L D + Q  I
Sbjct: 959 DLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 244/480 (50%), Gaps = 6/480 (1%)

Query: 1   MVNALCKDHK-IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V  LC+  +  D+A++    +E  G      TY  L++ YCR G LE+A +++  M   
Sbjct: 102 LVRDLCRRGRPADAARV----VEACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAH 157

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
                 + +N LI+ LC++GR   A  VLD ML  G +PD  TYN LL  +C+     +A
Sbjct: 158 VQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQA 217

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M   G  P+ V+++ +I    R G +D+A      + S G  P+ V Y  ++ G
Sbjct: 218 LELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 277

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C     ++A ++ DEM+ + C  +  T N I+N LCR  +L +      +M + G   +
Sbjct: 278 FCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTAN 337

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  +I G C+ GN++ AL L   M     KPDIVTYNT++ G C     E A +L  
Sbjct: 338 VVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMI 397

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M      P+  ++  +I+ +C  G + +AF ++ +M  KG  P   + +TII G  ++G
Sbjct: 398 KMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAG 457

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A E L++M ++G + D + Y  L     +E+ +++   +V K+++ G+ P  + YN
Sbjct: 458 KMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYN 516

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L G CR G+   +  +L  M+  G  PD STY  LI G   +   KEA      +  R
Sbjct: 517 TVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSR 576



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 226/422 (53%), Gaps = 1/422 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC+  ++  A + L  M  +G  PD VTYN L+ A C+     +A +L++ M  +G
Sbjct: 169 LIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEG 228

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TYN +I+ +C++G  D+A+E+L+ +   G  P+T  YNT+L   C  E   +A+
Sbjct: 229 CEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDAD 288

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI  EM R    P+  + + +I    R G L +  +Y  +M   G   + V Y  +I+G 
Sbjct: 289 EILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGM 348

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V  AL++   M   GC  D+VTYNT+L GLC A    +A++L  +M +    PD 
Sbjct: 349 CEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDN 408

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF T+I   C+ G + +A  +F  M +K   P+  TY+T+I G  K G+ME+A +L  +
Sbjct: 409 STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M ++  + + + Y +L         + E  ++ +++   GI P  V  NT++ G CR+G 
Sbjct: 469 MANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGK 527

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A + L+ MVS G  PD  +Y  LI G   E    +A  L+S++ ++ ++ + +  N 
Sbjct: 528 TDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNE 587

Query: 421 IL 422
            L
Sbjct: 588 AL 589



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 193/390 (49%), Gaps = 3/390 (0%)

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
           PD    N L+ + CR+   ++A  +         A    ++  L+  + R G L+ A   
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVVEACGPEATA---ATYGALVDGYCRAGLLEDARRV 150

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
              M +         +  +I+  C  G V +AL + D ML +GC  DVVTYN +L   C+
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
            +   +A +L + M   G  P+  T+  +I   C++G++++A  L + +  +  KP+ V 
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           YNT++ GFC +     A+++  +M+     PN  +  ++IN  C  G + +      +M 
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMS 330

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
             G    +V+ N +I G C  G+   A E LS M S G  PD ++YNT++ G    +  +
Sbjct: 331 KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWE 390

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            A  L+ KM     +PD  T+N I++ +C++G +  +  +  +M EKG NP+ +TY+T+I
Sbjct: 391 DAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTII 450

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            G      +++A    +EM  +GF  D  +
Sbjct: 451 GGLTKAGKMEQALELLNEMANKGFNTDKMY 480


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 259/485 (53%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  ++  L +M   G+ P+  TYN+LI  Y   G  +E+ ++   MS  G
Sbjct: 198 LIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSG 257

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V   NS I+ LC+  R   AK++ D M+  G  P+  +Y+TLL     +   +   
Sbjct: 258 LIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMN 317

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G+ P+   F+ LI  ++R G +D+A++ F +M++ G++PD V +  +I+  
Sbjct: 318 SLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 377

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD- 239
           CR G + +AL   + M++ G       Y  ++ G C    L +A +L +EM+ + + P  
Sbjct: 378 CRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPG 437

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F+++I+   K+G + +  ++ D+M Q   +P++VT+N+L++G+C VG ME+A  L  
Sbjct: 438 VKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 497

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M S  I PN   YG L++GYC  G + +A  ++ +M+ KG+KPT V  N I+ G  ++ 
Sbjct: 498 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQAR 557

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             + A +   +M+  G      +Y  ++ G  R    D+A  L+ K+    +  D+IT+N
Sbjct: 558 RTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 617

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++++   + GR  +++ +   +   GL P   TY  +I+  + + + +EA      + + 
Sbjct: 618 IVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKS 677

Query: 480 GFVPD 484
           G  PD
Sbjct: 678 GRAPD 682



 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 245/454 (53%), Gaps = 1/454 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   TYN LI+ Y R    E A  +   +   GL P V +YN+LI+G  K+G  D+A E+
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M++  +SPD  TYN+L+   C+ + M ++E +  +M   G+ P+  ++++LI  +S 
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    ++  F+EM S+GL+P  V     I+  CR+  + EA  + D M+ KG   ++++
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T+L+G          + L N M+ +G+ P+   F  LI+ + + G M+KA+ +F+ M 
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K + PD VT+ T+I   C++G ++ A   +  M+   + P+   Y  LI G C+ G + 
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 328 EAFRLWYEMVGKGIKPTLVS-CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           +A  L  EM+ K I P  V   ++II    + G  ++  + +  MV  G  P+ +++N+L
Sbjct: 420 KAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSL 479

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           + G+    NM++AFAL+  M + G+ P+   Y  ++ G+C+ GR+ D+  +   M+ KG+
Sbjct: 480 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV 539

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            P    Y  +++G         A +   EM++ G
Sbjct: 540 KPTSVLYNIILHGLFQARRTTAAKKMFHEMIESG 573



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 208/390 (53%), Gaps = 3/390 (0%)

Query: 97  SPDTATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           +P   TYN +L++  R+ +  E A  +F  + R G+ PD+ S++TLI  FS+ G++D+A 
Sbjct: 119 APTIYTYN-ILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAY 177

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
             F +M    + PD V Y  +I+G C+   ++++ ++ ++M++ G   +  TYN+++ G 
Sbjct: 178 ELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGY 237

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
             A M  E+  +F EM   G+ P      + IH  C+   + +A ++FD M  K  KP+I
Sbjct: 238 STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNI 297

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           ++Y+TL+ G+   G     N L   M+S+ I PN+  + ILIN Y   G + +A  ++ +
Sbjct: 298 ISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFED 357

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M  KG+ P  V+  T+I   CR G    A    + MV  GV P    Y  LI G      
Sbjct: 358 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGE 417

Query: 396 MDKAFALVSKMENQGLVPDVITY-NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           + KA  L+S+M N+ + P  + Y + I+    ++GR+ + + I+  M++ G  P+  T+ 
Sbjct: 418 LVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFN 477

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +L+ G+    N++EAF   D M   G  P+
Sbjct: 478 SLMEGYCLVGNMEEAFALLDAMASIGIEPN 507



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 209/394 (53%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +   +D A +   +M+ KG+ PDTVT+ T+I++ CR G L++A    N M   G
Sbjct: 338 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEA 119
           + P    Y  LI G C  G   +AKE++ EM+   + P    Y + ++ +  KE  ++E 
Sbjct: 398 VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEG 457

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++I   M + G  P++V+F++L+  +   G ++ A      M S G+ P+  +Y  +++G
Sbjct: 458 KDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 517

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+NG + +AL +  +ML KG     V YN IL+GL +A+  T A  +F+EM+E G    
Sbjct: 518 YCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVS 577

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  ++ G C++   ++A  L + +   ++K DI+T+N +I    KVG  ++A +L+A
Sbjct: 578 IQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFA 637

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + P   +Y ++I+         EA  L+  +   G  P     N I++   +  
Sbjct: 638 AISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKA 697

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           + +KA  +LS +    +  ++ + + L + F RE
Sbjct: 698 EVAKASNYLSIIDENNLTLEASTISLLASLFSRE 731



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 155/282 (54%)

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + TYN +++   R      A  +F  +L  G+ PD  ++ TLI G  K+G ++KA  LF 
Sbjct: 122 IYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFY 181

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M ++S+ PD+VTYN+LIDG CK  EM K+ ++   M+   I PN  +Y  LI GY + G
Sbjct: 182 KMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAG 241

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
              E+ R++ EM   G+ P +V+CN+ I   CR     +A +    MV +G  P+ ISY+
Sbjct: 242 MWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYS 301

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TL++G+  E       +LV+ M ++G+VP+   +N+++  + R G M  + LI   M  K
Sbjct: 302 TLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNK 361

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G+ PD  T+ T+I+       L +A    + M+  G  P +A
Sbjct: 362 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEA 403



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 196/411 (47%), Gaps = 1/411 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  KG+ P+   +N LINAY R G +++A  +   M  KG+ P   T+ ++I+ LC+ GR
Sbjct: 323 MVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 382

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS-FS 139
            D A    + M+ +G+ P  A Y  L+   C    + +A+E+  EM  + + P  V  FS
Sbjct: 383 LDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 442

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           ++I    + G++         M   G  P+ V +  ++ GYC  G + EA  + D M   
Sbjct: 443 SIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 502

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   +   Y T+++G C+   + +A  +F +ML +GV P    +  ++HG  +      A
Sbjct: 503 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAA 562

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +F  M +      I TY  ++ G C+    ++AN L   + +  +  + I++ I+I+ 
Sbjct: 563 KKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 622

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
              +G   EA  L+  +   G+ PT+ + N +I    +     +AD     +   G  PD
Sbjct: 623 MLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPD 682

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           S   N ++   +++  + KA   +S ++   L  +  T +++ + F R+G+
Sbjct: 683 SRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGK 733



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 150/297 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K+ ++   K  +  M Q G  P+ VT+N+L+  YC  G +EEAF L+++M+  G
Sbjct: 444 IINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 503

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  + Y +L++G CK GR D A  V  +ML  G+ P +  YN +L    +    + A+
Sbjct: 504 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAK 563

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM   G    I ++  ++G   RN   D A M   ++ +  +  D + + I+I+  
Sbjct: 564 KMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 623

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA ++   +   G V  V TYN +++ L + +   EAD+LF  + + G  PD 
Sbjct: 624 LKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDS 683

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
                ++    K   + KA N   I+ + ++  +  T + L   F + G+  +  KL
Sbjct: 684 RLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKL 740



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 131/243 (53%), Gaps = 7/243 (2%)

Query: 251 CKDGNMNKALNLFDIMTQ------KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           C DG    A+ LF  M +       +  P I TYN LID + ++   E A  ++  ++  
Sbjct: 93  CSDGPA-LAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRT 151

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + P+  SY  LI+G+   G V +A+ L+Y+M+ + + P +V+ N++I G C++ +  K+
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 211

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
           +  L +MV  G+ P++ +YN+LI G+       ++  +  +M + GL+P V+  N  +  
Sbjct: 212 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 271

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            CR  R+ +++ I   M+ KG  P+  +Y+TL++G+ ++          + M+ +G VP+
Sbjct: 272 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 331

Query: 485 DAF 487
             F
Sbjct: 332 HRF 334


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 143/481 (29%), Positives = 251/481 (52%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
             C+   +   +  LC M++    PD   YN LINAYC  G   +A   M  M   G  P
Sbjct: 158 GFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTP 217

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + T+ ++IN  C +G    A+ + D M + G  P+   YNTL+    +  ++ +A  ++
Sbjct: 218 SLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLY 277

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM  + VAPD  +F+ L+    R G+ +      R++  +G +  + LY I ++G C  
Sbjct: 278 EEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWA 337

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G++ EA+K  ++MLEKG    VV +N+I+    RA +  +A   +  M++ G+FP   T 
Sbjct: 338 GWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTC 397

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           ++LI G  K   + +A +L   M  + +  +   +  L+DG+ ++G++  A  LW +M  
Sbjct: 398 SSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEG 457

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R I P+ +++   ING   +G V EA+ ++ +M  KG  P     N++I+G+C SG   +
Sbjct: 458 RGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQE 517

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A     +M  +G+ PD  + N +ING  +E  M  A  +   M + GL+PD++TYN ++ 
Sbjct: 518 ALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLID 577

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+C+      ++ ++ +M   G +PD +TY   ++G  +   +  A    +E++  G VP
Sbjct: 578 GYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVP 637

Query: 484 D 484
           D
Sbjct: 638 D 638



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 238/464 (51%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  +G  P    +N +I  +CR+G ++    L+  M     +P V+ YN LIN  C +G+
Sbjct: 140 MIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQ 199

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A   +  M+  G +P   T+ T++   C + NM EA  +F  M   G  P++V ++T
Sbjct: 200 TFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNT 259

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  + +   + +A M + EMKS  + PD   + I++ G+ R G   +  ++  ++ + G
Sbjct: 260 LMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSG 319

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            +     YN  ++GLC A  L EA     +MLE+G+ P    F ++I  + + G   KA 
Sbjct: 320 SLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAY 379

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             + +M +  + P  +T ++LI G  K+  +++A  L  +MI   +  N  ++ +L++GY
Sbjct: 380 KAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGY 439

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             MG V  A+ LW EM G+GI P  V+ +  I G    G   +A +   +M  +G  P++
Sbjct: 440 FRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNN 499

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
             YN+LI GF     + +A  L  +M  +GL+PD+ T N+I+ G C++GRM  +  +   
Sbjct: 500 FVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRN 559

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M   GL PD  TY TLI+G+    +        ++M   G+ PD
Sbjct: 560 MHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPD 603



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 248/503 (49%), Gaps = 37/503 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C   +   A  ++  M   G  P  VT+ T+INA+C +G + EA  L + M   G
Sbjct: 190 LINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAG 249

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES---------- 110
             P V  YN+L+NG  K     +A  + +EM    ++PD  T+N L+             
Sbjct: 250 HIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRD 309

Query: 111 -------------------------CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                                    C    + EA +   +M  +G+ P +V+F+++I  +
Sbjct: 310 RLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAY 369

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           SR G  ++A   +R M   GL P ++  + +I G  +   + EA  +  EM+ +G  ++ 
Sbjct: 370 SRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINK 429

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             +  +L+G  R   +  A  L+NEM  RG+ PD   F+  I+G    G +++A ++F  
Sbjct: 430 AAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQ 489

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M++K   P+   YN+LI GFC  G +++A  L  +M  + + P+  +  I+ING C  G 
Sbjct: 490 MSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGR 549

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A  ++  M   G+ P +V+ NT+I GYC++ D    DE ++KM + G DPD  +YN 
Sbjct: 550 MKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNI 609

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
            ++G      M +A  ++ ++ + G+VPD +TYN ++ G C    +  + ++  ++++  
Sbjct: 610 RLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMA 668

Query: 446 LNPDRSTYTTLINGHVSQNNLKE 468
             P+  T   L++ H  +  + E
Sbjct: 669 FVPNVVTANLLLS-HFCKQGMPE 690


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 248/459 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV  LC   KI+  +  +     K   P  V YN +I+ YC++G L+ A + +N +  KG
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY +LING CK G  +   ++L EM   GL+ +   +N ++    +   ++EA 
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAA 330

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M+  G  PDI +++ +I    + G+++ A     + K  GL+P+   YT +++ Y
Sbjct: 331 EMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAY 390

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G  ++A  M   + E G   D+V+Y   ++G+  A  +  A  +  +M+E+GVFPD 
Sbjct: 391 CKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDA 450

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  L+ G CK G +     L   M  ++++PD+  + TLIDGF + GE+++A K++  
Sbjct: 451 QIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKV 510

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +I + + P  + Y  +I G+C  G +T+A     EM      P   + +T+I GY +  D
Sbjct: 511 IIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHD 570

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A +   +M+     P+ I+Y +LINGF ++ +M +A  + S M++  LVP+V+TY  
Sbjct: 571 MSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTT 630

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++ GF + G+   +  I   M+  G  P+ +T+  LING
Sbjct: 631 LVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLING 669



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 253/517 (48%), Gaps = 49/517 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +  A   L E++ KGV P   TY  LIN +C+ G  E   QL+  M+ +G
Sbjct: 246 IIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 305

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   V  +N++I+   K G    A E+L  M +MG  PD  TYN ++  SC+   + EA+
Sbjct: 306 LNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEAD 365

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +   RG+ P+  S++ L+  + + G   +A      +   G   D V Y   I+G 
Sbjct: 366 ELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGV 425

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G +  AL +R++M+EKG   D   YN +++GLC+   +     L +EML+R V PD 
Sbjct: 426 VVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDV 485

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y F TLI G  ++G +++A+ +F ++ +K + P IV YN +I GFCK G+M  A     +
Sbjct: 486 YVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNE 545

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S   +P+  +Y  +I+GY     ++ A +++ +M+    KP +++  ++I G+C+  D
Sbjct: 546 MNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKAD 605

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD------ 414
             +A++  S M S  + P+ ++Y TL+ GF +    ++A ++   M   G +P+      
Sbjct: 606 MIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHY 665

Query: 415 -------------------------------------------VITYNVILTGFCRQGRM 431
                                                      +  YN ++   C+ G +
Sbjct: 666 LINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTV 725

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
             ++L+L +M+ KG   D   +T L++G   +   KE
Sbjct: 726 DTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKE 762



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/547 (27%), Positives = 253/547 (46%), Gaps = 75/547 (13%)

Query: 15  KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-KGLKPGVFTYNSLIN 73
           ++ L  M+ + + P    ++ LI AY   G L+ A QL +++       P     N L+N
Sbjct: 115 ELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLN 174

Query: 74  GLCKKGRCDRAKEVLDEMLQM------------------GLS------------------ 97
           GL K G+ D A ++ D+MLQ                   GL                   
Sbjct: 175 GLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGK 234

Query: 98  ---PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
              P    YN ++   C+K ++  A     E+  +GV P + ++  LI  F + G+ +  
Sbjct: 235 CCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAV 294

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
                EM + GL  +  ++  +I+   + G V EA +M   M E GC  D+ TYN ++N 
Sbjct: 295 DQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINF 354

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN-LFDI-------- 265
            C+   + EAD+L  +  ERG+ P+ +++T L+H +CK G+  KA   LF I        
Sbjct: 355 SCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSD 414

Query: 266 --------------------------MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
                                     M +K + PD   YN L+ G CK G +     L +
Sbjct: 415 LVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLS 474

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+ R + P+   +  LI+G+   G + EA +++  ++ KG+ P +V  N +IKG+C+ G
Sbjct: 475 EMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFG 534

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             + A   L++M S    PD  +Y+T+I+G+V++ +M  A  +  +M      P+VITY 
Sbjct: 535 KMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYT 594

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ GFC++  M  +E +   M    L P+  TYTTL+ G       + A    + ML  
Sbjct: 595 SLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMN 654

Query: 480 GFVPDDA 486
           G +P+DA
Sbjct: 655 GCLPNDA 661



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 237/457 (51%), Gaps = 14/457 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N  CK  +I+ A   L + +++G+ P+  +Y  L++AYC++G   +A  ++  ++  G
Sbjct: 351 MINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIG 410

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  + +Y + I+G+   G  D A  V ++M++ G+ PD   YN L+   C+K  +   +
Sbjct: 411 EKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMK 470

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  R V PD+  F+TLI  F RNG+LD A+  F+ +   G+ P  V Y  +I G+
Sbjct: 471 LLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGF 530

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +AL   +EM       D  TY+T+++G  +   ++ A  +F +M++    P+ 
Sbjct: 531 CKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNV 590

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI+G CK  +M +A  +F  M    + P++VTY TL+ GF K G+ E+A  ++  
Sbjct: 591 ITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFEL 650

Query: 301 MISRKISPNYISYGILINGYCSMG--------------HVTEAFRLWYEMVGKGIKPTLV 346
           M+     PN  ++  LING  +                  +     +  M+  G    + 
Sbjct: 651 MLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIA 710

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + N++I   C+ G    A   L+KM+++G   DS+ +  L++G   +    +   ++S  
Sbjct: 711 AYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCD 770

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            N+  +   + Y++ L  +  QGR+ ++ +IL  ++E
Sbjct: 771 LNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLVE 807



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 200/429 (46%), Gaps = 44/429 (10%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           S D   +++LL          E E +   M  + + P   +FS LI  ++ +G LDRAL 
Sbjct: 92  SLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQ 151

Query: 157 YF---REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE----KGCVMDVVTYN 209
            F   REM +    P  V   +++NG  ++G V  AL++ D+ML+     G V+D  T +
Sbjct: 152 LFHTVREMHNC--FPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTS 209

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            ++ GLC    + E   L      +   P    +  +I G+CK G++  A    + +  K
Sbjct: 210 IMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMK 269

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS---------------------- 307
            + P + TY  LI+GFCK GE E  ++L  +M +R ++                      
Sbjct: 270 GVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEA 329

Query: 308 -------------PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
                        P+  +Y I+IN  C  G + EA  L  +   +G+ P   S   ++  
Sbjct: 330 AEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHA 389

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           YC+ GD  KA   L ++   G   D +SY   I+G V    +D A  +  KM  +G+ PD
Sbjct: 390 YCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPD 449

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
              YN++++G C++GR+   +L+L  M+++ + PD   + TLI+G +    L EA +   
Sbjct: 450 AQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFK 509

Query: 475 EMLQRGFVP 483
            ++++G  P
Sbjct: 510 VIIRKGVDP 518


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 254/484 (52%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+ +I  A++ L EM ++GV P   TYN +I+ YC+ G L++A  +   M G G
Sbjct: 294 LIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNG 353

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +TYNSLI+GLC  G+ D A+E+L+  +  G SP   T+  ++   C+ E + +A 
Sbjct: 354 CNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDAL 412

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M       D+ ++  LI +  +  +L  A     E+ + GL P+ V+YT II+ Y
Sbjct: 413 RVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAY 472

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  AL++      +GC  +  TY++++ GL + + L +A  L  +M E G+ P  
Sbjct: 473 CKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 532

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI G CK    + A  LF++M Q  + PD   YN L D  CK G  E+A   ++ 
Sbjct: 533 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSF 589

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + +    ++Y  L++G+   G+   A  L  +MV +G K    + + +++  C+   
Sbjct: 590 LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKK 649

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A   L +M   GV  + ++Y  +I+  ++E   D A ++ ++M + G  P  ITY V
Sbjct: 650 LNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTV 709

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            ++ +C+ GR+ ++  ++  M   G+ PD  TY   ING      +  AF     M+   
Sbjct: 710 FISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDAS 769

Query: 481 FVPD 484
             P+
Sbjct: 770 CEPN 773



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/466 (31%), Positives = 243/466 (52%), Gaps = 4/466 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           ++ Q+G+ PDTVTYNT+I AYC+EG L  A +    +   G++   +T N+L+ G C+ G
Sbjct: 173 QLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTG 232

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +A  +L  M  MG   +  +Y  L+   C    + EA  +   M + G +P++ +++
Sbjct: 233 DLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYT 292

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI    + G++  A +   EM   G+VP    Y  +I+GYC++G + +AL ++  M   
Sbjct: 293 LLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGN 352

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           GC  D  TYN++++GLC  K   EA++L N  + RG  P   TFT +I+G+CK   ++ A
Sbjct: 353 GCNPDDWTYNSLIHGLCGGKP-DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDA 411

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L +  IM     K D+  Y  LI    K   +++A     ++ +  +SPN + Y  +I+ 
Sbjct: 412 LRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDA 471

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           YC +G V  A  ++     +G +P   + +++I G  +     KA   ++KM  +G+ P 
Sbjct: 472 YCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPG 531

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y TLI G  ++   D AF L   ME  GL PD   YNV+    C+ GR  ++   L 
Sbjct: 532 VITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL- 590

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             ++KG+   + TYT+L++G     N + A    ++M+  G   D 
Sbjct: 591 --VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADS 634



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 155/519 (29%), Positives = 257/519 (49%), Gaps = 39/519 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ A CK+  +  A  +   + + G+  DT T N L+  YCR G L +A  L+  M   G
Sbjct: 189 MIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMG 248

Query: 61  LKPGVFTYNSLINGLCKKGRCDR-AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +   ++Y  LI GLC+  RC R A  +L  MLQ G SP+  TY  L+   C++  + +A
Sbjct: 249 CRRNEYSYTILIQGLCET-RCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDA 307

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN--------- 170
             +  EM RRGV P + +++ +I  + ++G+L  AL     M+  G  PD+         
Sbjct: 308 RVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHG 367

Query: 171 -------------------------VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                                    + +T IINGYC+   + +AL+++  M+   C +D+
Sbjct: 368 LCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDL 427

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y  +++ L +   L EA D  NE+   G+ P+   +T++I  +CK G +  AL +F +
Sbjct: 428 QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKL 487

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
              +  +P+  TY++LI G  +  ++ KA  L   M    I+P  I+Y  LI G C    
Sbjct: 488 TEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 547

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              AFRL+  M   G+ P   + N +    C+SG A +A  FL   V +GV    ++Y +
Sbjct: 548 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTS 604

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L++GF +  N + A AL+ KM N+G   D  TY+V+L   C+Q +++++  IL +M  +G
Sbjct: 605 LVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRG 664

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  +   YT +I+  + +     A    +EM+  G  P 
Sbjct: 665 VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPS 703



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 242/499 (48%), Gaps = 19/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  KID A      M       D   Y  LI+   ++  L+EA   +N +   G
Sbjct: 398 IINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANG 457

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V  Y S+I+  CK G+   A EV       G  P+  TY++L+    + + + +A 
Sbjct: 458 LSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAM 517

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G+ P +++++TLI    +  + D A   F  M+  GL PD   Y ++ +  
Sbjct: 518 ALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDAL 577

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G   EA      +++KG V+  VTY ++++G  +A     A  L  +M+  G   D 
Sbjct: 578 CKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADS 634

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ L+   CK   +N+AL++ D MT + +K +IV Y  +I    K G+ + A  ++ +
Sbjct: 635 HTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNE 694

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS    P+ I+Y + I+ YC +G + EA  L  EM   G+ P +V+ N  I G    G 
Sbjct: 695 MISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGY 754

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREE----------------NMDKAFALVS 404
              A   L +M+    +P+  +Y  L+  F++                   +D  + L+ 
Sbjct: 755 MDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLE 814

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M   GL P  +TY+ I+ GFC+  R+ ++ ++L  M+ K ++P+   YT LI       
Sbjct: 815 RMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIK 874

Query: 465 NLKEAFRFHDEMLQRGFVP 483
             ++A  F   M++ GF P
Sbjct: 875 LFEKAASFVTNMIECGFQP 893



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 250/497 (50%), Gaps = 19/497 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K H++  AK  L E+   G+ P+ V Y ++I+AYC+ G +  A ++      +G
Sbjct: 433 LISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEG 492

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P  +TY+SLI GL +  +  +A  ++ +M + G++P   TY TL+   C+K     A 
Sbjct: 493 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 552

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M + G+ PD  +++ L     ++G+ + A  +   +   G+V   V YT +++G+
Sbjct: 553 RLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGF 609

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A  + ++M+ +GC  D  TY+ +L  LC+ K L EA  + ++M  RGV  + 
Sbjct: 610 SKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNI 669

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I    K+G  + A ++F+ M     KP  +TY   I  +CK+G +E+A  L  +
Sbjct: 670 VAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGE 729

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    ++P+ ++Y + ING   MG++  AF     M+    +P   +   ++K + +   
Sbjct: 730 MERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSL 789

Query: 361 AS-------------KAD---EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           A+             K D   + L +MV  G++P +++Y+++I GF +   +++A  L+ 
Sbjct: 790 ANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLD 849

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            M  + + P+   Y +++   C       +   +  MIE G  P   +Y  LI G   + 
Sbjct: 850 HMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEG 909

Query: 465 NLKEAFRFHDEMLQRGF 481
           +  +A     ++L+  +
Sbjct: 910 DYDKAKALFCDLLEMDY 926



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 227/471 (48%), Gaps = 41/471 (8%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           +A Q +    GK L      YN  +  L +    +   ++  +++Q GL PDT TYNT++
Sbjct: 131 DAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMI 190

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
           +  C++ +++ A   F  +   G+  D  + + L+  + R G L +A      M   G  
Sbjct: 191 MAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCR 250

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
            +   YTI+I G C    V EAL +   ML+ GC  ++ TY  ++ GLC+   + +A  L
Sbjct: 251 RNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVL 310

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
            +EM  RGV P  +T+  +I G+CK G +  AL +  +M      PD  TYN+LI G C 
Sbjct: 311 LDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG 370

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL--------------- 332
            G+ ++A +L    I+R  SP  I++  +INGYC    + +A R+               
Sbjct: 371 -GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQA 429

Query: 333 --------------------WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
                                 E+   G+ P +V   +II  YC+ G    A E      
Sbjct: 430 YGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTE 489

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            EG  P++ +Y++LI G ++++ + KA AL++KM+  G+ P VITY  ++ G C++    
Sbjct: 490 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF- 548

Query: 433 DSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           D+   L+ M+E+ GL PD   Y  L +        +EA+ F   ++++G V
Sbjct: 549 DNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGVV 596



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 222/450 (49%), Gaps = 19/450 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK H+ D+A      MEQ G+ PD   YN L +A C+ G  EEA+  +     KG
Sbjct: 538 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KG 594

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY SL++G  K G  + A  ++++M+  G   D+ TY+ LL   C+++ ++EA 
Sbjct: 595 VVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEAL 654

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M+ RGV  +IV+++ +I    + G+ D A   F EM S+G  P  + YT+ I+ Y
Sbjct: 655 SILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSY 714

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  +  EM   G   DVVTYN  +NG      +  A      M++    P++
Sbjct: 715 CKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNY 774

Query: 241 YTF---------TTLIHGHCKDGN-------MNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
           +T+          +L + H  D +       ++    L + M +  + P  VTY+++I G
Sbjct: 775 WTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAG 834

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           FCK   +E+A  L   M+ + ISPN   Y +LI   C +    +A      M+  G +P 
Sbjct: 835 FCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPH 894

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           L S + +I G C  GD  KA      ++    + + +++  L +G ++  ++D    L+S
Sbjct: 895 LESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLS 954

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDS 434
            MEN+    D  TY+++         M++S
Sbjct: 955 AMENRHCRIDSETYSMVTNNIHEASGMYES 984



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 227/521 (43%), Gaps = 54/521 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A CK  K+ +A       E +G  P+  TY++LI    ++  L +A  L+  M   G
Sbjct: 468 IIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 527

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + PGV TY +LI G CKK   D A  + + M Q GL+PD   YN L    C+      AE
Sbjct: 528 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKS---GRAE 584

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E +  + ++GV    V++++L+  FS+ G  + A     +M + G   D+  Y++++   
Sbjct: 585 EAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQAL 644

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EAL + D+M  +G   ++V Y  I++ + +      A  +FNEM+  G  P  
Sbjct: 645 CKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSA 704

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T  I  +CK G + +A +L   M +  + PD+VTYN  I+G   +G M+ A      
Sbjct: 705 ITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKR 764

Query: 301 MISRKISPNYISYGIL-------------------------------------------- 316
           MI     PNY +Y +L                                            
Sbjct: 765 MIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPT 824

Query: 317 -------INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
                  I G+C    + EA  L   M+GK I P       +IK  C      KA  F++
Sbjct: 825 AVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVT 884

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M+  G  P   SY+ LI G   E + DKA AL   +       + + + ++  G  + G
Sbjct: 885 NMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAG 944

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
            +     +L  M  +    D  TY+ + N     + + E++
Sbjct: 945 HVDICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYESY 985


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 143/457 (31%), Positives = 245/457 (53%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +  ++ +  +         L   M   G++    T N LIN  C   + + A  V
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             ++L++G  PD  TY TL+   C    + E+      +  +G+  D VS+ TLI    +
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            GQ   AL   R+++     PD V+Y  II+G C++  V +A  +  EM EK    +VVT
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y +++ G C    L +A  L NEM+ + V P+  TF TL+ G CK+G M +A +L  +M 
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ + PD+ TYN L+DG+  V E  KA  ++  M    ++ +  SY ++I+G   M  + 
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLD 346

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+  M  + + P +V+ +++I G C+SG  + A +++ +M   G  P+ I+Y +LI
Sbjct: 347 EAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLI 406

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +   +DKA AL+ K+++QG+  ++ TYN+++ G C+ GR+ D++ +   ++ KG N
Sbjct: 407 DALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHN 466

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D  TY+ +ING   ++   EA     +M  +G VPD
Sbjct: 467 VDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPD 503



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 248/443 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C   +I+SA     ++ + G  PD +TY TLI   C  G ++E+    + +  +G
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K    +Y +LINGLCK G+   A  +L ++      PD   YNT++   C+ + + +A 
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++CEM  + V P++V++++LI  F   GQLD+A     EM    + P+   +  +++G 
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  +   M+++G   DV TYN +++G    K   +A ++FN M + GV  D 
Sbjct: 270 CKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDV 329

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           ++++ +I G  K   +++A++LF+ M  +++ PD+V Y++LIDG CK G +  A K   +
Sbjct: 330 HSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDE 389

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R   PN I+Y  LI+  C    V +A  L  ++  +GI+  + + N ++ G C+ G 
Sbjct: 390 MHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGR 449

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A +    ++ +G + D ++Y+ +ING  +E   D+A  L+SKME++G VPD I Y  
Sbjct: 450 LTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYET 509

Query: 421 ILTGFCRQGRMHDSELILWRMIE 443
           I+  F  +     +E +L  MI+
Sbjct: 510 IINAFFEKDMNDKAEKLLREMID 532



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 237/458 (51%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            ME  G+  + +T N LIN+YC    +  AF +   +   G +P + TY +LI GLC  G
Sbjct: 74  RMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNG 133

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   +    D ++  G+  D  +Y TL+   C+      A  +  ++      PD+V ++
Sbjct: 134 QVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYN 193

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++  +  A   + EM    + P+ V YT +I G+C  G + +A  + +EM+ K
Sbjct: 194 TIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLK 253

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               +V T+NT+++GLC+   + EA  L   M++ GV PD +T+  L+ G+       KA
Sbjct: 254 NVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKA 313

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            N+F+IM Q  +  D+ +Y+ +I G  K+  +++A  L+  M +  + P+ ++Y  LI+G
Sbjct: 314 KNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDG 373

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G +  A +   EM  +G  P +++  ++I   C+S    KA   L K+  +G+  +
Sbjct: 374 LCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQAN 433

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +YN L++G  ++  +  A  +   +  +G   DV+TY++++ G C++    ++  +L 
Sbjct: 434 MYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLS 493

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           +M +KG  PD   Y T+IN    ++   +A +   EM+
Sbjct: 494 KMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 198/370 (53%)

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           N+++A + F  M R    P I+ F  ++G   +       +  F+ M+  G+  + +   
Sbjct: 29  NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+IN YC    +  A  +  ++L+ G   D++TY T++ GLC    + E+ +  + ++ +
Sbjct: 89  ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G+  D  ++ TLI+G CK G    AL L   +  +  +PD+V YNT+IDG CK   +  A
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L+ +M  +++ PN ++Y  LI G+C +G + +AF L  EMV K + P + + NT++ G
Sbjct: 209 FDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDG 268

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+ G   +A   ++ M+ EGV PD  +YN L++G+   +   KA  + + M   G+  D
Sbjct: 269 LCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCD 328

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V +Y+V+++G  +   + ++  +   M  + + PD   Y++LI+G      +  A ++ D
Sbjct: 329 VHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVD 388

Query: 475 EMLQRGFVPD 484
           EM  RG  P+
Sbjct: 389 EMHDRGQPPN 398



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 69/151 (45%)

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
           S+ ++ +A   +  M+     P ++    I+    ++           +M   G+  + I
Sbjct: 26  SLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYI 85

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           + N LIN +     ++ AF++ +K+   G  PD+ITY  ++ G C  G++ +S     R+
Sbjct: 86  TLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRL 145

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           + +G+  D  +Y TLING         A R 
Sbjct: 146 VSQGIKLDHVSYGTLINGLCKIGQTGPALRL 176


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 245/483 (50%), Gaps = 28/483 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  KID A      +++ G+ P+  TY   I A CR+G  EEA  +   M   G
Sbjct: 198 LMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAG 257

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T ++ I GLC   R D   E L  +       DT  Y  ++   C +  + EAE
Sbjct: 258 VNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAE 317

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY----------------FREMKSA 164
           ++F +M   G+APD   +  LI  + + G L +A+                  F+E + +
Sbjct: 318 DVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDS 377

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G+  D VLY I+++  C+ G V EA+++ +EM  +   +DVV Y T++ G C    L +A
Sbjct: 378 GIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDA 437

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            ++F EM ERG+ PD  T+  L+ G  ++G   +AL L D +  + +KP+  T+N +I+G
Sbjct: 438 KNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEG 497

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI--- 341
            C  G++++A      +  + +     +Y  +++GYC      +A+ L+  +  +GI   
Sbjct: 498 LCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILRM 553

Query: 342 -----KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
                +P  +    +I  +CR GD  +A      +V  G+ PD I+Y  +ING+ R   +
Sbjct: 554 LALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCL 613

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            +A  + + M+ +G+ PDVITY V+L G  +   + D+  +   MI +GL PD  TYT L
Sbjct: 614 REARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTAL 673

Query: 457 ING 459
           + G
Sbjct: 674 LPG 676



 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 155/510 (30%), Positives = 256/510 (50%), Gaps = 63/510 (12%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           + L+ AY R G  +EA   +     +G  P + + N L+N L + G+ D A  +   + +
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GI-------- 144
           +GL+P+  TY   +   CRK N  EA ++F EM   GV P+ V+ ST I G+        
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 145 --------------------------FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
                                     F    +L  A   F +M + G+ PD  +Y  +I+
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 179 GYCRNGFVLEALKMRDEML----------------EKGCVMDVVTYNTILNGLCRAKMLT 222
            YC+ G +L+A+ + ++M+                + G  +D V YN +++ LC+   + 
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 400

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           EA +L NEM  R +  D   +TTLI G+C  G +  A N+F+ M ++ I+PDIVTYN L+
Sbjct: 401 EAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 460

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            GF + G  ++A +L   + ++ + PN  ++  +I G C  G V EA      +  K   
Sbjct: 461 GGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDK--- 517

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG--------VDPDSISYNTLINGFVREE 394
             L + + ++ GYC++    KA E  S++  +G        V+P+ I Y  LI  F R+ 
Sbjct: 518 -CLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDG 576

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           +M +A  +   +  +G+ PDVITY +++ G+CR   + ++  I   M E+G+ PD  TYT
Sbjct: 577 DMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYT 636

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +++GH   NNL++A   +DEM+ RG  PD
Sbjct: 637 VVLDGHSKTNNLQDAINLYDEMIARGLQPD 666



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 215/394 (54%), Gaps = 28/394 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C + K+  A+    +M  +G+ PD   Y  LI+AYC+ G L +A  L N M   G
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362

Query: 61  LK------------PGVFT----YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
           +K             G+F     YN +++ LCK G+ + A E+L+EM    +S D   Y 
Sbjct: 363 IKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYT 422

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           TL+   C +  + +A+ +F EM  RG+ PDIV+++ L+G FSRNG    AL     + + 
Sbjct: 423 TLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQ 482

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           GL P++  +  II G C  G V EA    +  LE  C+ +   Y+ +++G C+A    +A
Sbjct: 483 GLKPNSATHNRIIEGLCMAGKVKEAEAFLN-TLEDKCLEN---YSAMVDGYCKANFTRKA 538

Query: 225 DDLFNEMLERGVF--------PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
            +LF+ + ++G+         P+   +  LI   C+DG+M +A  +FD++ ++ I PD++
Sbjct: 539 YELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVI 598

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           TY  +I+G+C+V  + +A  ++ DM  R I P+ I+Y ++++G+    ++ +A  L+ EM
Sbjct: 599 TYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEM 658

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           + +G++P +V+   ++ G C  G     +++L +
Sbjct: 659 IARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEE 692



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 127/521 (24%), Positives = 212/521 (40%), Gaps = 101/521 (19%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           A  F  ++++ G   +  TY  LI   CR     +   L++ + G   K  V  ++  I 
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGS--KESVLGFD--IT 135

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-SEAEEIFCEMSRRGVA 132
            L    R    +   +    + L  D      +LV++  +  M  EA +   +  RRG  
Sbjct: 136 ALFDVLREGGGEVEGEHSSVLILVLD------MLVKAYVRVGMFDEAIDALFQTKRRGFV 189

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
           P I+S + L+     +G++D A+  +R +K  GL P++                      
Sbjct: 190 PHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDY--------------------- 228

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP-------------- 238
                         TY   +  LCR     EA D+F EM E GV P              
Sbjct: 229 --------------TYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCS 274

Query: 239 ---------------------DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
                                D + +T +I G C +  + +A ++F  M  + I PD   
Sbjct: 275 HKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYI 334

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS----------------YGILINGYC 321
           Y  LI  +CK G + +A  L  DM+S  I  N +                 Y I+++  C
Sbjct: 335 YGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALC 394

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
            +G V EA  L  EM G+ +   +V   T+I GYC  G    A     +M   G++PD +
Sbjct: 395 KLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIV 454

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +YN L+ GF R     +A  L+  +  QGL P+  T+N I+ G C  G++ ++E  L  +
Sbjct: 455 TYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL 514

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            +K L      Y+ +++G+   N  ++A+     + ++G +
Sbjct: 515 EDKCL----ENYSAMVDGYCKANFTRKAYELFSRLSKQGIL 551



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 11/208 (5%)

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           N A + F  + +   + ++ TY  LI   C+     K   L ++++  K S         
Sbjct: 78  NLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKES--------- 128

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLV-SCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           + G+  +  + +  R     V       L+   + ++K Y R G   +A + L +    G
Sbjct: 129 VLGF-DITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRG 187

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             P  +S N L+N  +    +D A A+   ++  GL P+  TY + +   CR+G   ++ 
Sbjct: 188 FVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAV 247

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            +   M E G+NP+  T +T I G  S 
Sbjct: 248 DVFREMEEAGVNPNAVTCSTYIEGLCSH 275


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 145/442 (32%), Positives = 247/442 (55%), Gaps = 4/442 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A+ K  ++   K  L +M++ G+ P+ VTYN L+  YC+ G L+EAFQ++  M    
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS-EA 119
           + P + TYN LINGLC  G      E++D M  + L PD  TYNTL ++ C +  +S EA
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL-IDGCFELGLSLEA 364

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS-AGLVPDNVLYTIIIN 178
            ++  +M   GV  + V+ +  +    +  + +      +E+    G  PD V Y  +I 
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            Y + G +  AL+M  EM +KG  M+ +T NTIL+ LC+ + L EA +L N   +RG   
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+ TLI G  ++  + KAL ++D M +  I P + T+N+LI G C  G+ E A + +
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            ++    + P+  ++  +I GYC  G V +AF  + E +    KP   +CN ++ G C+ 
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   KA  F + ++ E  + D+++YNT+I+ F +++ + +A+ L+S+ME +GL PD  TY
Sbjct: 605 GMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663

Query: 419 NVILTGFCRQGRMHDSELILWR 440
           N  ++     G++ +++ +L +
Sbjct: 664 NSFISLLMEDGKLSETDELLKK 685



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/476 (31%), Positives = 245/476 (51%), Gaps = 3/476 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYN 69
           I SA+    +M + GV  +  T+N L+N YC EG LE+A  ++  M  +  + P   TYN
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +++  + KKGR    KE+L +M + GL P+  TYN L+   C+  ++ EA +I   M + 
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
            V PD+ +++ LI      G +   L     MKS  L PD V Y  +I+G    G  LEA
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVFPDFYTFTTLIH 248
            K+ ++M   G   + VT+N  L  LC+ +          E+++  G  PD  T+ TLI 
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
            + K G+++ AL +   M QK IK + +T NT++D  CK  ++++A+ L      R    
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + ++YG LI G+     V +A  +W EM    I PT+ + N++I G C  G    A E  
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            ++   G+ PD  ++N++I G+ +E  ++KAF   ++       PD  T N++L G C++
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G M +  L  +  + +    D  TY T+I+       LKEA+    EM ++G  PD
Sbjct: 605 G-MTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 240/463 (51%), Gaps = 5/463 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC---DRA 84
           P    ++  ++AY  EG    A Q+   M    LKP + T N+L+ GL +         A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVSFSTLIG 143
           +EV D+M+++G+S +  T+N L+   C +  + +A  +   M S   V PD V+++T++ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
             S+ G+L        +MK  GLVP+ V Y  ++ GYC+ G + EA ++ + M +   + 
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D+ TYN ++NGLC A  + E  +L + M    + PD  T+ TLI G  + G   +A  L 
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS-RKISPNYISYGILINGYCS 322
           + M    +K + VT+N  +   CK  + E   +   +++     SP+ ++Y  LI  Y  
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
           +G ++ A  +  EM  KGIK   ++ NTI+   C+     +A   L+     G   D ++
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y TLI GF REE ++KA  +  +M+   + P V T+N ++ G C  G+   +      + 
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           E GL PD ST+ ++I G+  +  +++AF F++E ++  F PD+
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 180/375 (48%), Gaps = 37/375 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC    +      +  M+   + PD VTYNTLI+     G   EA +LM  M   G
Sbjct: 316 LINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG 375

Query: 61  LK------------------------------------PGVFTYNSLINGLCKKGRCDRA 84
           +K                                    P + TY++LI    K G    A
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGA 435

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            E++ EM Q G+  +T T NT+L   C++  + EA  +     +RG   D V++ TLI  
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F R  ++++AL  + EMK   + P    +  +I G C +G    A++  DE+ E G + D
Sbjct: 496 FFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             T+N+I+ G C+   + +A + +NE ++    PD YT   L++G CK+G   KALN F+
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            + ++  + D VTYNT+I  FCK  ++++A  L ++M  + + P+  +Y   I+     G
Sbjct: 616 TLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDG 674

Query: 325 HVTEAFRLWYEMVGK 339
            ++E   L  +  GK
Sbjct: 675 KLSETDELLKKFSGK 689



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK+ +++ A  F  E  +    PD  T N L+N  C+EG  E+A    N++  +  +   
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDT 625

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TYN++I+  CK  +   A ++L EM + GL PD  TYN+ +        +SE +E+   
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL--- 682

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
                    +  FS   G   R+ Q++             L  + + Y+ +I+  C  G 
Sbjct: 683 ---------LKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGR 733

Query: 186 VLE 188
           + E
Sbjct: 734 LKE 736



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 23/103 (22%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           M++A CKD K+  A   L EME+KG+ PD  TYN+ I+    +G L E  +L+   SGK 
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKF 690

Query: 60  ----------------------GLKPGVFTYNSLINGLCKKGR 80
                                  L      Y+ +I+ LC +GR
Sbjct: 691 GSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGR 733


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 238/460 (51%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G+ PDT   N +IN+ C    +   F ++ +M   GL+P V T+  LINGLC KG   RA
Sbjct: 106 GIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRA 165

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            E++D + + G   D  TY  L+   C+    SEA     +M  R   P++V +ST++  
Sbjct: 166 VELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDG 225

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             ++G +  AL    EM   G+ P+ V YT +I G C  G   EA  + DEM++ G + D
Sbjct: 226 LCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPD 285

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + + N +++ LC+   + +A  +   M+  G  PD +T+ +LI  +C    M++A  +F+
Sbjct: 286 LQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFE 345

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M  +   PDIV Y +LI G+CK+  + KA  L  +MI    +P+ +++  LI G+C +G
Sbjct: 346 LMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVG 405

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               A  L+  M   G  P L +C  I+ G C+S   S+A      M    +D + + Y+
Sbjct: 406 RPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYS 465

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            +++G      ++ A  L S +  +GL  +V  Y +++ GF +QG +  +E +L  M E 
Sbjct: 466 IILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEEN 525

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G  PD  TY   + G V++  +  + ++   M  +GF  D
Sbjct: 526 GCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVD 565



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 153/471 (32%), Positives = 251/471 (53%), Gaps = 1/471 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+LC    +      L  M + G+ P  VT+  LIN  C +G +  A +L++ +   G
Sbjct: 117 VINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  V TY  LINGLCK G+   A   L +M +   +P+   Y+T++   C+   +SEA 
Sbjct: 177 YRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEAL 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EMS +G+ P++V+++ LI      G+   A     EM   G++PD     I+++  
Sbjct: 237 GLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVL 296

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +++A  +   M+  G V DV TYN++++  C    + EA  +F  M+ RG  PD 
Sbjct: 297 CKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDI 356

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+LIHG CK  N+NKA++L D M +    PD+VT+ TLI GFC+VG    A +L+ +
Sbjct: 357 VAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLN 416

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +  I+++G C    ++EA  L++ M    +   +V  + I+ G C +G 
Sbjct: 417 MHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGK 476

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E  S + ++G+  +  +Y  +INGF ++  +DKA  L+S ME  G +PD  TYNV
Sbjct: 477 LNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNV 536

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            + G   +  +  S   L  M +KG + D +T   +IN ++S N      R
Sbjct: 537 FVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIIN-YLSTNQGDNELR 586



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 233/484 (48%), Gaps = 39/484 (8%)

Query: 41  CREGFL---EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGL 96
           C+ G L   +EA    ++M+     P V  +  L+  + K      A  ++ EM   +G+
Sbjct: 48  CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
            PDT   N ++   C  + ++    +   M + G+ P +V+F+ LI      G + RA+ 
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
               ++  G   D   Y ++ING C+ G   EA+    +M E+    +VV Y+T+++GLC
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD------------ 264
           +  +++EA  L  EM  +G+ P+  T+T LI G C  G   +A +L D            
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQ 287

Query: 265 --------------IMTQKSI---------KPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
                         IM  KS+          PD+ TYN+LID +C   +M++A +++  M
Sbjct: 288 SLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELM 347

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +SR   P+ ++Y  LI+G+C + ++ +A  L  EM+  G  P +V+  T+I G+C+ G  
Sbjct: 348 VSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRP 407

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A E    M   G  P+  +   +++G  + + + +A +L   ME   L  +++ Y++I
Sbjct: 408 LAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSII 467

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L G C  G+++ +  +   +  KGL  +   YT +ING   Q  L +A      M + G 
Sbjct: 468 LDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGC 527

Query: 482 VPDD 485
           +PD 
Sbjct: 528 MPDS 531



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 204/403 (50%), Gaps = 35/403 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  K   A  +L +ME++   P+ V Y+T+++  C++G + EA  L   MSGKG
Sbjct: 187 LINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKG 246

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP + TY  LI GLC  GR   A  +LDEM++MG+ PD  + N L+   C++  + +A+
Sbjct: 247 IKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAK 306

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G  PD+ ++++LI  +    Q+D A   F  M S G +PD V YT +I+G+
Sbjct: 307 SVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGW 366

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNT------------------------------ 210
           C+   + +A+ + DEM++ G   DVVT+ T                              
Sbjct: 367 CKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNL 426

Query: 211 -----ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                IL+GLC++++L+EA  LF+ M +  +  +   ++ ++ G C  G +N AL LF  
Sbjct: 427 QTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSC 486

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +  K ++ ++  Y  +I+GF K G ++KA  L ++M      P+  +Y + + G  +   
Sbjct: 487 LPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAERE 546

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           +  + +    M  KG      +   II     +   ++  EFL
Sbjct: 547 IARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 148/475 (31%), Positives = 257/475 (54%), Gaps = 15/475 (3%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR-EGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           +D+A +    M Q    P  V +N ++    + +        L   M  KG+KP +FT +
Sbjct: 47  VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LIN  C  G+   A  V  ++L+MGL              C    ++EA      +   
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILKMGL--------------CLNGKVNEALLFHDHVLAL 152

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G   + V++  LI    + GQ   AL   R+++   +  + V+Y+ II+G C++  V +A
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDA 212

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             +  EM+ K     VVT+++++ G C      +A  LFNEM+ + + PD YTF  L+  
Sbjct: 213 YGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDA 272

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK+G + +A N+  +M ++ ++P +VTYNTL+DG+C V E+ KA  + + +   +++PN
Sbjct: 273 LCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPN 332

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             SY I+ING+C +  V EA  L++EM  +GI P  V+ N++I G C++G    A E + 
Sbjct: 333 SRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVD 392

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M +  +  D ++YN+LI+ F + +++DKA ALV K++  G+ P++ TYN+++ G C+ G
Sbjct: 393 EMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGG 452

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++ +++ +   ++ KG N +  TY  +ING   +    EA     +M   G +PD
Sbjct: 453 QLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPD 507



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 235/448 (52%), Gaps = 21/448 (4%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS-------MSGK------------- 59
           +ME KGV PD  T + LIN YC  G +  AF +          ++GK             
Sbjct: 92  QMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLA 151

Query: 60  -GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G      TY  LINGLCK G+   A +VL ++    ++ +   Y+T++   C+ + +++
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTD 211

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  ++ EM  + + P +V+FS+LI  F   G+   A   F EM    + PD   + I+++
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
             C+ G + EA  +   M+++G    VVTYNT+++G C    + +A  + + +    V P
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  ++  +I+G CK   +++AL LF  M  + I P  VTYN+LIDG CK G +  A +L 
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M +  I  + ++Y  LI+ +C   HV +A  L  ++   GI+P + + N +I G C+ 
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKG 451

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A +    ++ +G + ++ +YN +ING  +E   D+A  L+SKME+ G++PD +TY
Sbjct: 452 GQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTY 511

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGL 446
             I+     +     ++ +L  M+ KG+
Sbjct: 512 ETIIQALFHKDENEKAQKLLREMVIKGV 539



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 210/409 (51%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            LC + K++ A +F   +   G + + VTY  LIN  C+ G    A Q++  + GK +  
Sbjct: 132 GLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNT 191

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V  Y+++I+GLCK      A  +  EM+   + P   T+++L+   C      +A  +F
Sbjct: 192 NVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLF 251

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM  + + PD  +F+ L+    + G++  A      M   G+ P  V Y  +++GYC  
Sbjct: 252 NEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLV 311

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
             V +A  +   +       +  +YN ++NG C+ KM+ EA  LF+EM  RG+ P   T+
Sbjct: 312 NEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTY 371

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            +LI G CK G +  A  L D M    I  DIVTYN+LID FCK   ++KA  L   +  
Sbjct: 372 NSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKE 431

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             I PN  +Y ILI+G C  G +  A  ++ +++ KG      + N +I G C+ G   +
Sbjct: 432 HGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDE 491

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
           A+  LSKM   G+ PD+++Y T+I     ++  +KA  L+ +M  +G+V
Sbjct: 492 AEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 211/376 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +  +A   L ++E K V  + V Y+T+I+  C++  + +A+ L + M  K 
Sbjct: 164 LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR 223

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T++SLI G C  G+   A  + +EM+   ++PD  T+N L+   C++  + EA+
Sbjct: 224 IPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAK 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M + GV P +V+++TL+  +    ++ +A      +    + P++  Y I+ING+
Sbjct: 284 NVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGF 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EAL +  EM  +G     VTYN++++GLC+A  +  A +L +EM    +  D 
Sbjct: 344 CKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADI 403

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LI   CK+ +++KA+ L   + +  I+P++ TYN LIDG CK G+++ A  ++ D
Sbjct: 404 VTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQD 463

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ +  + N  +Y I+ING C  G   EA  L  +M   GI P  V+  TII+      +
Sbjct: 464 LLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDE 523

Query: 361 ASKADEFLSKMVSEGV 376
             KA + L +MV +GV
Sbjct: 524 NEKAQKLLREMVIKGV 539



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 143/301 (47%), Gaps = 35/301 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTL------------------------ 36
           +V+ALCK+ KI  AK  +  M ++GV P  VTYNTL                        
Sbjct: 269 LVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR 328

Query: 37  -----------INAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                      IN +C+   ++EA  L + M  +G+ P   TYNSLI+GLCK GR   A 
Sbjct: 329 VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAW 388

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           E++DEM    +  D  TYN+L+   C+ +++ +A  +  ++   G+ P++ +++ LI   
Sbjct: 389 ELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGL 448

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + GQL  A   F+++   G   +   Y I+ING C+ G   EA  +  +M + G + D 
Sbjct: 449 CKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDA 508

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY TI+  L       +A  L  EM+ +GV    +     + G   +  MN    LF  
Sbjct: 509 VTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLNLGMNLISLLFSA 568

Query: 266 M 266
           +
Sbjct: 569 L 569


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 153/463 (33%), Positives = 251/463 (54%), Gaps = 7/463 (1%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K D  K F  +M   G  P   TYN +I+  C+EG +E A  L   M  +GL P   TYN
Sbjct: 113 KTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYN 172

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           S+I+G  K GR D      +EM  M   PD  TYNTL+   C+   + +  E F EM + 
Sbjct: 173 SMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQS 232

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G+ P++VS+STL+  F +   + +AL ++ +M+  GLVP+   YT +++ YC+ G + +A
Sbjct: 233 GLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDA 292

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            ++ DEM + G   +VVTY  +++GLC  + + EA++LF +M+  GV P+  ++T LIHG
Sbjct: 293 FRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHG 352

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
             K  NM++AL L D M  + IKPD++ Y T I   C + ++E A  +  +M  + I  N
Sbjct: 353 FVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKAN 412

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
              Y  L++ Y    + +E   L  EM+   I+ T V+   +I G C++   SKA ++  
Sbjct: 413 TFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFG 472

Query: 370 KMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           ++ ++ G+  ++  Y  +I+G  +E+ ++ A  L  +M  +GLVPD   Y  ++ G  +Q
Sbjct: 473 RISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQ 532

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           G +  +  +  +M E G+            G + QN +K + R
Sbjct: 533 GNVVQALALRDKMAEIGVESGARF------GDLCQNTIKLSLR 569



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 248/489 (50%), Gaps = 36/489 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    ++ L +    E   EEA Q  + M    + P   + N L++   + G+ D  K  
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M+  G  P   TYN ++   C++ ++  A  +F EM  RG+ PD V+++++I  + +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+LD  + +F EMKS    PD + Y  +IN +C+ G + + L+   EM + G   +VV+
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T+++  C+  M+ +A   + +M   G+ P+ +T+T+L+  +CK GN++ A  L D M+
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q  ++ ++VTY  LIDG C V  +++A +L+  M++  + PN  SY  LI+G+    ++ 
Sbjct: 301 QVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMD 360

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  L  EM G+GIKP L+   T I   C       A   +++M  +G+  ++  Y TL+
Sbjct: 361 RALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLM 420

Query: 388 NGFVREEN-----------------------------------MDKAFALVSKMENQ-GL 411
           + + + EN                                   + KA     ++ N  GL
Sbjct: 421 DAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGL 480

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
             +   Y  ++ G C++ ++  +  +  +M +KGL PDR+ YT+LI+G + Q N+ +A  
Sbjct: 481 QANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALA 540

Query: 472 FHDEMLQRG 480
             D+M + G
Sbjct: 541 LRDKMAEIG 549



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 193/395 (48%), Gaps = 41/395 (10%)

Query: 112 RKENMSEAEEIFCEM------SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           R+  +S+AE   C++      +R    P    F  L  +       + AL  F +MK   
Sbjct: 34  REMVLSKAELKDCDVFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCR 93

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           + P       +++ + R G      +   +M+  G    V TYN +++ +C+   +  A 
Sbjct: 94  VFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAAS 153

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            LF EM  RG+ PD  T+ ++I G+ K G ++  +  F+ M   S +PD++TYNTLI+ F
Sbjct: 154 GLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCF 213

Query: 286 CKVGE-----------------------------------MEKANKLWADMISRKISPNY 310
           CK G+                                   M++A K + DM    + PN 
Sbjct: 214 CKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNE 273

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +Y  L++ YC +G++++AFRL  EM   G++  +V+   +I G C      +A+E   K
Sbjct: 274 HTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGK 333

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV+ GV P+  SY  LI+GFV+ +NMD+A  L+ +M+ +G+ PD++ Y   +   C   +
Sbjct: 334 MVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEK 393

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +  +++++  M EKG+  +   YTTL++ +    N
Sbjct: 394 IEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSEN 428



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 35/319 (10%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV     ++ + + L    M  EA   F++M    VFP   +   L+H   + G  +   
Sbjct: 59  CVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMK 118

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             F  M     KP + TYN +ID  CK G++E A+ L+ +M  R + P+ ++Y  +I+GY
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGY 178

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G + +    + EM     +P +++ NT+I  +C+ G   K  EF  +M   G+ P+ 
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNV 238

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVP--------------------------- 413
           +SY+TL++ F +E+ M +A      M   GLVP                           
Sbjct: 239 VSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADE 298

Query: 414 --------DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
                   +V+TY  ++ G C   R+ ++E +  +M+  G+ P+ ++YT LI+G V   N
Sbjct: 299 MSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKN 358

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +  A    DEM  RG  PD
Sbjct: 359 MDRALELLDEMKGRGIKPD 377



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 120/230 (52%), Gaps = 2/230 (0%)

Query: 258 KALNLFDIM--TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           K  ++FD++  T+    P    ++ L     +    E+A + ++ M   ++ P   S   
Sbjct: 44  KDCDVFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNG 103

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           L++ +  +G      R + +M+G G KPT+ + N +I   C+ GD   A     +M   G
Sbjct: 104 LLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRG 163

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           + PD+++YN++I+G+ +   +D       +M++    PDVITYN ++  FC+ G++    
Sbjct: 164 LIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGL 223

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                M + GL P+  +Y+TL++    ++ +++A +F+ +M + G VP++
Sbjct: 224 EFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNE 273



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 85/230 (36%), Gaps = 64/230 (27%)

Query: 317 INGYCSMGHVTEAFRLWY-------EMVGKGIKPTLVSCNTI-----IKGYCRSG----D 360
           I  YC + H+    R++Y       EMV    K  L  C+        +  C  G    D
Sbjct: 10  IESYCIVAHILFCARMYYDANRILREMVLS--KAELKDCDVFDVLWSTRNVCVPGFGVFD 67

Query: 361 A-----------SKADEFLSKMVSEGVDPDSISYNTLINGFVR----------------- 392
           A            +A +  SKM    V P + S N L++ F R                 
Sbjct: 68  ALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGA 127

Query: 393 ------------------EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
                             E +++ A  L  +M+ +GL+PD +TYN ++ G+ + GR+ D+
Sbjct: 128 GSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDT 187

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                 M      PD  TY TLIN       L +   F  EM Q G  P+
Sbjct: 188 VYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 39/65 (60%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK+ ++++A     +M QKG+ PD   Y +LI+   ++G + +A  L + M+  G
Sbjct: 490 MIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIG 549

Query: 61  LKPGV 65
           ++ G 
Sbjct: 550 VESGA 554


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 250/500 (50%), Gaps = 16/500 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC    +  A      M+  G  PD   Y T+++  C  G   EA  L++    +G
Sbjct: 148 LLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEG 207

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN+LI+G C  G  + A +V + M   G SP+  TY  L+   C+   +  A 
Sbjct: 208 FEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAM 267

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M   G+ P++V+++ LI     +GQLD A    + M+++GLVP+    +++I+  
Sbjct: 268 MLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDAL 327

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  V EA  +   +++KG  ++ + Y ++++GLC+A     AD L   ++ +G  PD 
Sbjct: 328 CKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDA 387

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI G C+   +++A+ + D M +K ++P  VTY  +ID   +    + + K+   
Sbjct: 388 HTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDK 447

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI+  I P+  +Y I +  YC  G + +A  +   MV  G+ P LV+ N +I GY   G 
Sbjct: 448 MIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGL 507

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN----------------MDKAFALVS 404
            S+A      MV+ G  P+  SY  L+   +++E+                M     L+ 
Sbjct: 508 TSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLE 567

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M    L  ++  YN  LT  CR  R+ +++++L  M    L P    YT++I       
Sbjct: 568 EMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLK 627

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
            L EA  F D M++ G++P 
Sbjct: 628 MLTEALTFVDSMVKSGYIPQ 647



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 226/454 (49%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           TY TLINAYC  G L  + + ++S+   G  P    Y S + G C+ G    A  +   M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              G      TY  LL   C    + EA  +F  M   G APD   ++T++      G+ 
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
             A     +  + G  P+ V+Y  +I+GYC  G +  A+ + + M   GC  +V TY  +
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++G C+++ L  A  LF+ M++ G+ P+  T+T LI G C DG ++ A  L   M    +
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P+  T + LID  CK   + +A  L   +I + I  N I Y  LI+G C  G    A R
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L   +V +G  P   + +++I G CR  + S+A   L  M+ +GV P  ++Y  +I+  V
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           RE   D +  ++ KM   G+ PDV TY + +  +C +GRM D+E ++  M++ G+ P+  
Sbjct: 434 REVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLV 493

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           TY  LI G+ +     +AF     M+  G  P++
Sbjct: 494 TYNALICGYANLGLTSQAFSTFKHMVANGCKPNE 527



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 225/451 (49%), Gaps = 4/451 (0%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N  + A  R   L +     + M  + L+    TY +LIN  C  G    +K  L  +L+
Sbjct: 45  NAFLMALARHRMLADMESFASRMPARNLR----TYTTLINAYCLAGDLPASKRHLSSLLR 100

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            G +PD+  Y + +V  CR   ++ A  +F  M  RG      +++ L+      G +  
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVRE 160

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A+  F  M++ G  PD  +Y  +++G C  G   EA  +  + + +G   +VV YN +++
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           G C    L  A D+F  M   G  P+  T+T LI G CK   +++A+ LF  M    + P
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           ++VTY  LI G C  G+++ A +L   M +  + PN  +  +LI+  C    V EA  L 
Sbjct: 281 NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
             ++ KGIK   +   ++I G C++G  + AD  +  +VS+G  PD+ +Y++LI+G  R+
Sbjct: 341 GSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQ 400

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           + + +A  ++  M  +G+ P  +TY +I+    R+     S+ IL +MI  G+ PD  TY
Sbjct: 401 KELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTY 460

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           T  +  +  +  +++A      M+  G  P+
Sbjct: 461 TIFVRSYCHEGRMEDAEHMMLHMVDHGVCPN 491



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 236/538 (43%), Gaps = 51/538 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LC   +   A+  L +   +G  P+ V YN LI+ YC  G LE A  +   M   G
Sbjct: 183 MVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  LI+G CK  + DRA  +   M+  GL P+  TY  L+   C    +  A 
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAY 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+ P+  + S LI    ++ ++  A +    +   G+  + ++YT +I+G 
Sbjct: 303 RLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGL 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A ++   ++ +G V D  TY+++++GLCR K L+EA  + ++M+E+GV P  
Sbjct: 363 CKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSP 422

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I    ++   + +  + D M    IKPD+ TY   +  +C  G ME A  +   
Sbjct: 423 VTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLH 482

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFR----------------------------- 331
           M+   + PN ++Y  LI GY ++G  ++AF                              
Sbjct: 483 MVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKES 542

Query: 332 ----------LWY------------EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
                     +W             EMV   +   +   N  +   CR     +A   L 
Sbjct: 543 SNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLI 602

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M S  + P    Y ++I    R + + +A   V  M   G +P + +Y  I++  C +G
Sbjct: 603 EMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEG 662

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            +  ++ +   M+ K  N +   +  LI+G + +  + E       M ++ + P DA 
Sbjct: 663 SIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDAL 720



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 220/487 (45%), Gaps = 16/487 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  K+D A M    M   G+ P+ VTY  LI   C +G L+ A++L+ SM   G
Sbjct: 253 LISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSG 312

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +T + LI+ LCK  R   A+ +L  ++Q G+  +   Y +L+   C+    + A+
Sbjct: 313 LVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAAD 372

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   +  +G  PD  ++S+LI    R  +L  A++   +M   G+ P  V YTIII+  
Sbjct: 373 RLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R      + K+ D+M+  G   DV TY   +   C    + +A+ +   M++ GV P+ 
Sbjct: 433 VREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNL 492

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID----------------G 284
            T+  LI G+   G  ++A + F  M     KP+  +Y  L+                  
Sbjct: 493 VTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVS 552

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
             K+ EM+  + L  +M+  ++      Y   +   C +  + EA  L  EM    + P+
Sbjct: 553 IWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPS 612

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
                +II   CR    ++A  F+  MV  G  P   SY  +I+    E ++  A  +  
Sbjct: 613 EDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFG 672

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            M ++    + I + +++ G  ++G + +   +L  M EK   P  + Y  L       N
Sbjct: 673 DMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDAN 732

Query: 465 NLKEAFR 471
           +++E  R
Sbjct: 733 DIQEIAR 739


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 233/422 (55%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P  F +N++++ L           +  +    G++PD  T + L+   C + +++ A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           F  + +RG  P+ ++ +TLI      G++ +AL +  ++ + G   D V Y  +ING C+
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G      ++  ++       DVV YNTI+N LC+ K+L +A D+++EM+ +G+ PD  T
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +TTLIHG C  G++ +A +L + M  K+I P++ T+N LID   K G+M++A  L A M+
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              I P+  +Y  LI+GY  +  V  A  ++Y M  +G+ P +     +I G C++    
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +A     +M  + + PD ++YN+LI+G  +  ++++A AL  +M+ QG+ PDV +Y ++L
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G C+ GR+ D++ I  R++ KG + +   YT LIN         EA     +M  +G +
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCM 474

Query: 483 PD 484
           PD
Sbjct: 475 PD 476



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 228/415 (54%), Gaps = 2/415 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C    I  A      + ++G +P+ +T NTLI   C  G +++A    + +  +G
Sbjct: 98  LINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQG 157

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +LINGLCK G       +L ++    + PD   YNT++   C+ + + +A 
Sbjct: 158 FQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDAC 217

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM  +G++PD+V+++TLI  F   G L  A     EMK   + P+   + I+I+  
Sbjct: 218 DVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDAL 277

Query: 181 CRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            + G + EA K+   ++ K C+  DV TYN++++G      +  A  +F  M +RGV PD
Sbjct: 278 SKEGKMKEA-KILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPD 336

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +T +I+G CK   +++A++LF+ M  K++ PDIVTYN+LIDG CK   +E+A  L  
Sbjct: 337 VQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCK 396

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  + I P+  SY IL++G C  G + +A  ++  ++ KG    + +   +I   C++G
Sbjct: 397 RMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAG 456

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
              +A +  SKM  +G  PD+++++ +I     ++  DKA  ++ +M  +GL+ +
Sbjct: 457 FFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 226/457 (49%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P T  +N ++++            L       G+ P + T + LIN  C +     A  V
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              +L+ G  P+  T NTL+   C +  + +A     ++  +G   D VS+ TLI    +
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+        R+++   + PD V+Y  IIN  C+N  + +A  +  EM+ KG   DVVT
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T+++G C    L EA  L NEM  + + P+  TF  LI    K+G M +A  L  +M 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  IKPD+ TYN+LIDG+  V E++ A  ++  M  R ++P+   Y  +ING C    V 
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+ EM  K + P +V+ N++I G C++    +A     +M  +G+ PD  SY  L+
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  +   ++ A  +  ++  +G   +V  Y V++   C+ G   ++  +  +M +KG  
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCM 474

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           PD  T+  +I     ++   +A +   EM+ RG + +
Sbjct: 475 PDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 198/391 (50%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           ML M   P T  +N +L      ++      +F +    G+ PD+ + S LI  F     
Sbjct: 48  MLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAH 107

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +  A   F  +   G  P+ +    +I G C  G + +AL   D+++ +G  +D V+Y T
Sbjct: 108 ITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGT 167

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++NGLC+         L  ++    V PD   + T+I+  CK+  +  A +++  M  K 
Sbjct: 168 LINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 227

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I PD+VTY TLI GFC +G +++A  L  +M  + I+PN  ++ ILI+     G + EA 
Sbjct: 228 ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAK 287

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L   M+   IKP + + N++I GY    +   A      M   GV PD   Y  +ING 
Sbjct: 288 ILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGL 347

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            + + +D+A +L  +M+++ ++PD++TYN ++ G C+   +  +  +  RM E+G+ PD 
Sbjct: 348 CKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDV 407

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            +YT L++G      L++A      +L +G+
Sbjct: 408 YSYTILLDGLCKSGRLEDAKEIFQRLLAKGY 438



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 114/226 (50%)

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+  F++M      P    +N ++              L+       I+P+  +  ILIN
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            +C   H+T AF ++  ++ +G  P  ++ NT+IKG C  G+  KA  F  ++V++G   
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D +SY TLING  +         L+ K+E   + PDV+ YN I+   C+   + D+  + 
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             MI KG++PD  TYTTLI+G     +LKEAF   +EM  +   P+
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPN 266



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           FN ML     P  + F  ++     + +    ++LF       I PD+ T + LI+ FC 
Sbjct: 45  FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
              +  A  ++A+++ R   PN I+   LI G C  G + +A     ++V +G +   VS
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
             T+I G C++G+       L K+    V PD + YNT+IN   + + +  A  + S+M 
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 408 NQGLVPDVITYNVILTGFC-----------------------------------RQGRMH 432
            +G+ PDV+TY  ++ GFC                                   ++G+M 
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +++++L  M++  + PD  TY +LI+G+   + +K A      M QRG  PD
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPD 336


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 160/534 (29%), Positives = 258/534 (48%), Gaps = 50/534 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV  LC + +++  +  +     +G  P  V YN LI+ YCR G +     L+  M  KG
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY ++I+ L +K    + + +L EM + GLSP+   YNT++   C+  + S+A 
Sbjct: 342 IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQAL 401

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M      PD+V+F+TLI  F R G ++ AL   RE     L P+ + YT +I+G+
Sbjct: 402 AVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGF 461

Query: 181 CRNGFVL-----------------------------------EALKMRDEMLEKGCVMDV 205
           C  G V+                                   EAL +R++M E+  + D 
Sbjct: 462 CVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDA 521

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN +++GLC+ +ML+ A +L  EMLE+ V PD + +TTLI G  +   ++ A  +F+ 
Sbjct: 522 NIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEF 581

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +K    DIV YN +I G+CK G M +A    + M      P+  +Y  LI+GY   G 
Sbjct: 582 MEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGD 641

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A R   +M+ +  KP +V+  ++I GYC  G+   A+   + M SEG+ P+ + Y  
Sbjct: 642 IKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTV 701

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF--CRQG----------RMHD 433
           LI    +++   +A A    M      P+  T + ++ G   CR G          + H 
Sbjct: 702 LIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHK 761

Query: 434 SELIL---WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              +L     +I  GL+P  S Y  +I      N L +A    ++M  +G +PD
Sbjct: 762 KSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPD 815



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 239/458 (52%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D  +   ++   C EG +EE  +L+ +  G+G  PG   YN LI+G C++G   R   +L
Sbjct: 275 DDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLL 334

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            EM   G+ P   TY  ++    RK ++++ E +  EM  RG++P++  ++T+I    + 
Sbjct: 335 GEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKC 394

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
               +AL    +M ++   PD V +  +I  +CR G V EALK+  E + +    + ++Y
Sbjct: 395 RSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSY 454

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
             +++G C    +  A DL  EM+ RG  PD  T   LIHG    G +++AL + + M +
Sbjct: 455 TPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAE 514

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           + + PD   YN LI G CK   +  A  L  +M+ +K+ P+   Y  LI+G+     +++
Sbjct: 515 RQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSD 574

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A +++  M  KG    +V+ N +IKGYC+SG  ++A   +S M   G  PD  +Y TLI+
Sbjct: 575 ARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLID 634

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ ++ ++  A   +  M  +   P+++TY  ++ G+C  G    +E++   M  +GL P
Sbjct: 635 GYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFP 694

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +   YT LI     ++   +A  + + ML     P+DA
Sbjct: 695 NVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDA 732



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 15/308 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   + +AK  L EM ++ V PD   Y TLI+ + R   L +A ++   M  KG
Sbjct: 527 LISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKG 586

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               +  YN++I G CK G  + A   +  M ++G  PD  TY TL+    +K ++  A 
Sbjct: 587 GYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAAL 646

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
              C+M +R   P+IV++++LI  +   G  D A + F  M+S GL P+ V YT++I   
Sbjct: 647 RFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSL 706

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL--CRAKML----TEAD--------- 225
            +    ++A    + ML   C  +  T + ++NGL  CR  M+    ++ D         
Sbjct: 707 FKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALL 766

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           D+F  ++  G+ P    +  +I   C+   + KA+ L + M+ K   PD VT+ +L+ GF
Sbjct: 767 DVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGF 826

Query: 286 CKVGEMEK 293
             VG+  K
Sbjct: 827 SSVGKSGK 834



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 140/263 (53%), Gaps = 2/263 (0%)

Query: 224 ADDLFNEML--ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
           A  L+ EML  +R    D Y+   ++ G C +G + +   L +    +   P  V YN L
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           IDG+C+ G++ +   L  +M  + I P  ++YG +I+       +T+   L +EM  +G+
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            P +   NT+I   C+   AS+A   L++MV+   DPD +++NTLI  F RE ++++A  
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           L+ +   + L P+ ++Y  ++ GFC +G +  +  +L  MI +G  PD  T   LI+G V
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLV 497

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
               + EA    ++M +R  +PD
Sbjct: 498 VSGQVDEALMVREKMAERQVMPD 520


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 251/478 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  + D A   + EME+ G  P  VTYN+LI++Y ++G LE+A  L   M  KG
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V TY +LI+GL + G+ D A    DEM++ G  P+  TYN L+     +    E  
Sbjct: 344 IKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E+   G  PDIV+++TL+ +F +NG        F+EMK AG +P+   Y  +I+ Y
Sbjct: 404 AVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 463

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G    A+++   M+E G   DV TYN +L+ L R     +A+ LF EM ER   PD 
Sbjct: 464 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y++++L+H +     ++K   L D +  + I+P      TL+    KV  + +A K + +
Sbjct: 524 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLE 583

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  ++ S +      +++ Y     V +  ++   M    I  +  + N+++  Y R GD
Sbjct: 584 LRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGD 643

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K +  L+++ S GV PD  SYNT+I  + R+  M +A  L S+M+  GL PDV+TYN+
Sbjct: 644 CEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNI 703

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            +  +       ++  ++  M+ +G  P+  TY +++ G+     L +A  F   + Q
Sbjct: 704 FVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 761



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 252/504 (50%), Gaps = 35/504 (6%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            +  M++ GV PD  TYNTLI+   R    +EA Q+ + M   G +P   T+NSL++   
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K  R D A EV+ EM ++G  P   TYN+L+    +   + +A  +  EM  +G+ PD+V
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVV 349

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TLI    R G++D A++ + EM   G  P+   Y  +I  +   G   E + + DE+
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEL 409

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
              G V D+VT+NT+L    +  + +E   +F EM + G  P+  T+ +LI  + + G  
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A+ ++  M +  I PD+ TYN ++    + G  E+A KL+A+M  R   P+  SY  L
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKP------TLVSCNT-------------------- 350
           ++ Y +   + +   L  ++  + I+P      TLV  N+                    
Sbjct: 530 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 589

Query: 351 ---------IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
                    ++  Y ++    K ++ LS M    ++  + +YN+L++ + R  + +K   
Sbjct: 590 SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCEN 649

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +++++++ G+ PD  +YN ++  + R+G+M ++  +   M   GL PD  TY   +  +V
Sbjct: 650 ILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYV 709

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDD 485
           S +  +EA      M+ +G  P++
Sbjct: 710 SNSMFEEAIELVRYMVTQGCKPNE 733



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 237/529 (44%), Gaps = 73/529 (13%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG-RCDRAKE 86
           PD   Y  L++A+ R G   +A  +   M   G++P + TYN +++   K         E
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++  M + G++PD  TYNTL +  CR+  +  EA ++F EM   G  PD V+F++L+ ++
Sbjct: 230 LVASMKEHGVAPDRYTYNTL-ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  + D A+   +EM+  G  P  V Y  +I+ Y ++G + +A+ ++ EM  KG   DV
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDV 348

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY T+++GL RA  +  A   ++EM+  G  P+  T+  LI  H   G   + + +FD 
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +      PDIVT+NTL+  F + G   + + ++ +M      P   +Y  LI+ Y   G 
Sbjct: 409 LRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              A +++  M+  GI P + + N ++    R G   +A++  ++M      PD  SY++
Sbjct: 469 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 528

Query: 386 LINGFVREENMDKAFALVSKMENQGLVP-------------------------------- 413
           L++ +   + +DK  AL   + ++ + P                                
Sbjct: 529 LLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 588

Query: 414 ---DVITYNVILTGFCRQGRMHDSELILWRMIEKGLN----------------------- 447
              D+   N +++ + +   +   E IL  M E  +N                       
Sbjct: 589 CSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 648

Query: 448 ------------PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                       PDR +Y T+I  +  +  +KEA R   EM   G  PD
Sbjct: 649 NILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPD 697



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 210/467 (44%), Gaps = 40/467 (8%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E+  +GV        T I    R G L EA  L+++  G    P    Y +L++   + G
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG----PDAGAYTALVSAFSRAG 186

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLL-VESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           R   A  V   M+  G+ P   TYN +L V S       E  E+   M   GVAPD  ++
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 246

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           +TLI    R      A   F EMK++G  PD V +  +++ Y +     EA+++  EM  
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            GC   VVTYN++++   +  +L +A  L  EM  +G+ PD  T+TTLI G  + G ++ 
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDA 366

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+  +D M +   KP++ TYN LI                              +G+   
Sbjct: 367 AIVEYDEMVRNGCKPNLCTYNALIK----------------------------MHGV--- 395

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
                G   E   ++ E+   G  P +V+ NT++  + ++G  S+      +M   G  P
Sbjct: 396 ----RGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP 451

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +  +Y +LI+ + R    D A  +  +M   G+ PDV TYN +L+   R GR   +E + 
Sbjct: 452 ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLF 511

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M E+   PD  +Y++L++ + +   L +     D++      P +
Sbjct: 512 AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 558



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 49/94 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  +  ++  A     EM+  G+ PD VTYN  + +Y      EEA +L+  M  +G
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQG 728

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            KP   TYNS++ G C+ G+   AK  +  + Q+
Sbjct: 729 CKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 762


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  264 bits (674), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 245/491 (49%), Gaps = 22/491 (4%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++   K  L  M  +G YP    +N+L++AYC+      A++L+  M     KPG   YN
Sbjct: 358 QLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYN 417

Query: 70  SLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            LI  +C  G        + A++  +EML  G   +     +     C      +A ++ 
Sbjct: 418 ILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVI 477

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM   G  PD  ++S +IG      +++ A   F+EMK  G+VPD   YTI+I+ + + 
Sbjct: 478 HEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKA 537

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +A    DEM+  GC   VVTY T+++   +AK ++ A++LF  M+ +G FP+  T+
Sbjct: 538 GIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597

Query: 244 TTLIHGHCKDGNMNKALNL----------------FDIMTQKSIKPDIVTYNTLIDGFCK 287
           T LI G+CK GN+ KA  +                F I    + KP++VTY  L+DG CK
Sbjct: 598 TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
             +++ A  L   M      PN I Y  LI+G+C    + EA  ++++MV  G  P + +
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYT 717

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            +++I    +        + LSKM+     P+ + Y  +I+G  +    D+A+ L+  ME
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME 777

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G  P+V+TY  ++ GF + G++     +   M  KG  P+  TYT LIN   +  +L 
Sbjct: 778 EKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837

Query: 468 EAFRFHDEMLQ 478
           EA+   +EM Q
Sbjct: 838 EAYALLEEMKQ 848



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 248/498 (49%), Gaps = 20/498 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K + A   + EM   G  PDT TY+ +I   C    +E AF L   M G G+ P 
Sbjct: 464 LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPD 523

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  LI+   K G   +A   LDEM++ G  P   TY TL+    + + +S A E+F 
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M  +G  P++++++ LI  + ++G +++A                 MYF+   +    P
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKP 643

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +++G C+   V +A  + + M   GC  + + Y+ +++G C+A  L EA ++F
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
           ++M+E G  P+ YT+++LI    KD  ++  L +   M + S  P+IV Y  +IDG  KV
Sbjct: 704 HKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            + ++A KL   M  +   PN ++Y  +I+G+   G V +   L+ EM  KG  P  V+ 
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C +G   +A   L +M          SY  +I G+ RE  +  +  L+ ++E 
Sbjct: 824 TVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEK 881

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN--PDRSTYTTLINGHVSQNNL 466
            G  P ++ Y V++  F + GR+  +  +   +I   ++    ++ YT+LI      + +
Sbjct: 882 NGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKI 941

Query: 467 KEAFRFHDEMLQRGFVPD 484
             AF    +M++ G +PD
Sbjct: 942 GHAFELFYDMIRDGVIPD 959



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 243/505 (48%), Gaps = 25/505 (4%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
             ALCK  K   A   L  +E++   P+T+ YN +I+  C   F EEA   +N M     
Sbjct: 283 AQALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSC 339

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P V TY  L+ G   K +  R K +L  M+  G  P    +N+L+   C+ ++ S A +
Sbjct: 340 IPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYK 399

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY------FREMKSAGLVPDNVLYTI 175
           +  +M +    P  V ++ LIG     G+L   + +      + EM SAG V + V    
Sbjct: 400 LLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVS 459

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
                C  G   +A K+  EM+  G V D  TY+ ++  LC A  +  A  LF EM   G
Sbjct: 460 FARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           V PD YT+T LI    K G + +A N  D M +   +P +VTY TLI  + K  ++  AN
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK---------------- 339
           +L+  MI++   PN I+Y  LI+GYC  G++ +A +++  M G                 
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
             KP +V+   ++ G C++     A + L  M  +G +P++I Y+ LI+GF +   +D+A
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             +  KM   G  P+V TY+ ++    +  R+     +L +M+E    P+   YT +I+G
Sbjct: 700 QEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
                   EA++    M ++G  P+
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPN 784



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 209/422 (49%), Gaps = 24/422 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K  K+  A      M  KG +P+ +TY  LI+ YC+ G +E+A Q+   M G  
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDA 624

Query: 61  ----------------LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                            KP V TY +L++GLCK  +   A+++L+ M   G  P+T  Y+
Sbjct: 625 DIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYD 684

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   + EA+E+F +M   G  P++ ++S+LI    ++ +LD  L    +M   
Sbjct: 685 ALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN 744

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V+YT +I+G  +     EA K+   M EKGC  +VVTY  +++G  +A  + + 
Sbjct: 745 SCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKC 804

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            +LF EM  +G  P+F T+T LI+  C  G++++A  L + M Q      + +Y  +I+G
Sbjct: 805 LELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEG 864

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI--- 341
           + +  E   +  L  ++     +P  + Y +LI+ +   G +  A  L  E++   +   
Sbjct: 865 YKR--EFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMA 922

Query: 342 -KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
            K  L +  ++I  +  +     A E    M+ +GV PD  ++  L+ G +R    ++A 
Sbjct: 923 AKKNLYT--SLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEAL 980

Query: 401 AL 402
            L
Sbjct: 981 QL 982



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 207/477 (43%), Gaps = 9/477 (1%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
            K FL    Q G       Y  L++ + R  +     + +  + G   +      N LI 
Sbjct: 155 VKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIR 214

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
             C+ G  + A E L  +   G  P   TYN L+    R + +  A+ +  EMS  G++ 
Sbjct: 215 KCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSM 274

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D  +         + G+   AL     ++    VP+ +LY  +I+G C   F  EA+   
Sbjct: 275 DEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEEAMDFL 331

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           + M    C+ +V TY  +L G    K L     + + M+  G +P +  F +L+H +CK 
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS 391

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM------EKANKLWADMISRKIS 307
            + + A  L   M +   KP  V YN LI   C  GE+      E A K + +M+S    
Sbjct: 392 DDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTV 451

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            N ++        C  G   +A+++ +EM+G G  P   + + +I   C +     A   
Sbjct: 452 LNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M   GV PD  +Y  LI+ F +   + +A   + +M   G  P V+TY  ++  + +
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++  +  +   MI KG  P+  TYT LI+G+    N+++A + +  M     +PD
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD 628



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 4/273 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L KD ++D     L +M +    P+ V Y  +I+   +    +EA++LM  M  KG
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY ++I+G  K G+ D+  E+  EM   G +P+  TY  L+   C   ++ EA 
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM +      + S+  +I  + R   L   L+   E++  G  P  +LY ++I+ +
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLL--EEVEKNGSAPIILLYKVLIDNF 898

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVT--YNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            + G +  AL++  E++     M      Y +++     A  +  A +LF +M+  GV P
Sbjct: 899 VKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIP 958

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           D  TF  L+ G  +     +AL L D + Q  I
Sbjct: 959 DLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  264 bits (674), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 243/429 (56%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +KG  P+ +T+NTLI   C +G + +A    + +  +G      +Y +LINGLCK GR  
Sbjct: 133 KKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 192

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A ++L  +    + P+   YN ++   C+ + +++A +++ +M  + ++PD  + ++LI
Sbjct: 193 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLI 252

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F   GQL  A+    +M    + P    ++I+++ +C+ G V EA  M    ++K  +
Sbjct: 253 YGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDII 312

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           +DVVTYN++++G C  K + +A D+F+ M  RGV  +  ++TT+I+G CK   +++A+NL
Sbjct: 313 LDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNL 372

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M  + I P++VTYN+LIDG  K+G++    KL  +M  R   PN I+Y  +++  C 
Sbjct: 373 FEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCK 432

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
             HV +A  L   +  +GI+P + +   +IKG C+SG    A +    ++ +G + D  +
Sbjct: 433 NHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYT 492

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y  +I GF  +   D A AL+SKME+ G +P+  TY +++     +     +E +L  MI
Sbjct: 493 YTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMI 552

Query: 443 EKGLNPDRS 451
            +GL  ++S
Sbjct: 553 ARGLLDEKS 561



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 244/464 (52%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           +  K   P  + +N ++++  +      A  L   M   G+    FT+N LIN   + G 
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              +  V  ++L+ G  P+  T+NTL+   C K ++ +A     ++  +G   D VS+ T
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    + G++  AL   + +    + P+ V+Y +II+  C+   V +A  +  +M+ K 
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D  T N+++ G C    L EA  L ++M+   + P  YTF+ L+   CK+G + +A 
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAK 300

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            +  +  +K I  D+VTYN+L+DG+C V E+ KA  ++  M SR +  N  SY  +ING 
Sbjct: 301 MMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGL 360

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +  V EA  L+ EM  + I P +V+ N++I G  + G  S   + + +M   G  P+ 
Sbjct: 361 CKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNI 420

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           I+YN++++   +  ++DKA AL++ +++QG+ PD+ TY V++ G C+ G++ D++ +   
Sbjct: 421 ITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFED 480

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++ KG N D  TYT +I G   +     A     +M   G +P+
Sbjct: 481 LLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPN 524



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 125/249 (50%), Gaps = 1/249 (0%)

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G+FP   +  + +H H +D   N   +   ++  K+  P I+ +N ++    K      A
Sbjct: 31  GLFPSSISLYSQLHHH-QDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTA 89

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L   M    I  ++ ++ ILIN +  +G  + +F ++ +++ KG  P  ++ NT+IKG
Sbjct: 90  LSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKG 149

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C  G   +A  F  K+V++G   D +SY TLING  +   +  A  L+ +++ + + P+
Sbjct: 150 LCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPN 209

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            + YN+I+   C+   ++D+  +  +M+ K ++PD  T  +LI G      LKEA     
Sbjct: 210 AVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLH 269

Query: 475 EMLQRGFVP 483
           +M+     P
Sbjct: 270 KMILENINP 278


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 255/466 (54%), Gaps = 6/466 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+++  K   ++       EM+++ +    VTYN LIN + + G +EEA +    M   G
Sbjct: 280 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSG 339

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                +++N LI G CK+G  D A  V DEML  G+ P T+TYN  +   C    + +A 
Sbjct: 340 FPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDAR 399

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M+    APD+VS++TL+  + +  +   A + F ++K+  + P  V Y  +I+G 
Sbjct: 400 ELLSSMA----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGL 455

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G +  A ++++EM  +    DV+TY T+L G  +   L+ A ++++EML +G+ PD 
Sbjct: 456 CESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDG 515

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIM-TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
           Y +TT   G  + G+  KA  L + M  +    PD+  YN  IDG CKVG +EKA +   
Sbjct: 516 YAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQR 575

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    + P++++Y  +I GY   G    A  L+ EM+ K + P++++   +I G+ ++G
Sbjct: 576 KIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAG 635

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A ++ ++M   GV P+ +++N L++G  +  N+D+A+  + KME +G+ P+  +Y 
Sbjct: 636 RLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYT 695

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ++++  C   +  +   +   M++K + PD  T+  L   H+ +++
Sbjct: 696 ILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFK-HLEKDH 740



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 253/465 (54%), Gaps = 5/465 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   G+ P  +T+NT++++  + G LE   ++   M  + ++    TYN LING  K G+
Sbjct: 265 MVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGK 324

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A+    +M + G      ++N L+   C++    EA  +  EM   G+ P   +++ 
Sbjct: 325 MEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNI 384

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I      G++D A    RE+ S+   PD V Y  +++GY +    +EA  + D++    
Sbjct: 385 YIRALCEFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGN 440

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
               +VTYNT+++GLC +  L  A  L  EM  + ++PD  T+TTL+ G  K+GN++ A 
Sbjct: 441 INPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMAT 500

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILING 319
            ++D M +K IKPD   Y T   G  ++G+ EKA +L  +M++    +P+   Y + I+G
Sbjct: 501 EIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDG 560

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G++ +A     ++   G+ P  V+  T+I+GY   G    A +   +M+S+ + P 
Sbjct: 561 LCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPS 620

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y  LI+G  +   +++AF   ++M+ +G+ P+V+T+N +L G C+ G + ++   L 
Sbjct: 621 VITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLC 680

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +M E+G++P++ +YT LI+ H   +  +E  + + EML +   PD
Sbjct: 681 KMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPD 725



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/447 (32%), Positives = 234/447 (52%), Gaps = 5/447 (1%)

Query: 39  AYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSP 98
            Y ++   E+       M  KG  P V   N ++  L      ++A+EV + M+  G+ P
Sbjct: 213 VYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMP 272

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
              T+NT+L    +  ++   ++I+ EM RR +    V+++ LI  FS++G+++ A  + 
Sbjct: 273 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFH 332

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
            +M+ +G       +  +I GYC+ G   EA  + DEML  G      TYN  +  LC  
Sbjct: 333 GDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEF 392

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
             + +A +L + M      PD  ++ TL+HG+ K     +A  LFD +   +I P IVTY
Sbjct: 393 GRIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTY 448

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           NTLIDG C+ G +E A +L  +M S+ I P+ I+Y  L+ G+   G+++ A  ++ EM+ 
Sbjct: 449 NTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLR 508

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD-PDSISYNTLINGFVREENMD 397
           KGIKP   +  T   G  R GD+ KA     +MV+E    PD   YN  I+G  +  N++
Sbjct: 509 KGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLE 568

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           KA     K+   GLVPD +TY  ++ G+  +GR   +  +   M+ K L+P   TY  LI
Sbjct: 569 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLI 628

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +GH     L++AF++  EM +RG  P+
Sbjct: 629 HGHAKAGRLEQAFQYSTEMKKRGVRPN 655


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 153/470 (32%), Positives = 247/470 (52%), Gaps = 12/470 (2%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC+  ++ SA     EM+     P + ++N L+  +   G + +A   +  M        
Sbjct: 77  LCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVA 136

Query: 65  VFTYNSLINGLC----KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             TYN ++ GLC       R ++A E   EM   G+ PD  +Y+ LL        M+EA 
Sbjct: 137 TGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAH 196

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M+    +PDI++++ L+  + + GQ   A    +E+  AG  P+   Y+IIIN Y
Sbjct: 197 ALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCY 253

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA ++  +M+E  CV + VT+NT++ G C+A ML +A  LF EM + G     
Sbjct: 254 CKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATI 313

Query: 241 YTFTTLIHGHCKD-GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            T+ TLI   CK  G +  A++LF+ +    + P IVTYN+LI GFC    + +A + + 
Sbjct: 314 VTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYF- 372

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           D +  K +PN I+Y ILI+G C +  + EA +   +M   G  PT+V+   +I G+C+ G
Sbjct: 373 DEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG 432

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +   A  F  KM   G  P+++ +NTLI+G  + E  +    L+  M  +G  PDVITYN
Sbjct: 433 ELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYN 492

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            +++G C   R+ D++ +   M      P+ +T+  LI G  +Q  ++EA
Sbjct: 493 CLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEA 539



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/481 (31%), Positives = 239/481 (49%), Gaps = 9/481 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  ++  A     +M+  G+ P+  T NTL+   C  G +  A +L   M    
Sbjct: 38  LIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGP 97

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC----RKENM 116
             P   ++N L+ G    GR   A   L +M +   S  T TYN +L   C        +
Sbjct: 98  FLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRL 157

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A E F EM   GV PD+ S+  L+   S +G++  A   F  M  +   PD + Y ++
Sbjct: 158 EQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVL 214

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           ++GYC+ G   EA  +  E+L+ G   +V TY+ I+N  C+   + EA ++F +M+E   
Sbjct: 215 MDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNC 274

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV-GEMEKAN 295
            P+  TF TLI G CK G +  A+ LF  M +   K  IVTYNTLID  CK  G +  A 
Sbjct: 275 VPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAV 334

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            L+  +    ++P  ++Y  LI G+C    ++EA + + EM GK   P +++ + +I G 
Sbjct: 335 DLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGL 393

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+     +A + L  M + G  P  ++Y  LINGF +   +  A     KM+  G  P+ 
Sbjct: 394 CKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNT 453

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           + +N ++ G C+  R +D   +L  M  +G  PD  TY  LI+G  S N +++A R  D 
Sbjct: 454 VIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDG 513

Query: 476 M 476
           M
Sbjct: 514 M 514



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/434 (31%), Positives = 227/434 (52%), Gaps = 12/434 (2%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG----FLEEAFQLMNSMSGKGLKPGV 65
           ++  A   L +M +      T TYN ++   C E      LE+A +    M   G++P +
Sbjct: 117 RVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDL 176

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            +Y+ L++ L   GR   A  +   M     SPD  TYN L+   C+     EA+ +  E
Sbjct: 177 ESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           + + G  P++ ++S +I  + +  +++ A   F +M  +  VP+ V +  +I G+C+ G 
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM-LTEADDLFNEMLERGVFPDFYTFT 244
           + +A+K+  EM + GC   +VTYNT+++ LC+ +  +  A DLFN++   G+ P   T+ 
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           +LI G C    +++A+  FD M  K   P+++TY+ LIDG CKV  M++A K   DM + 
Sbjct: 354 SLIQGFCDARRLSEAMQYFDEMEGKC-APNVITYSILIDGLCKVRRMKEAAKTLEDMKAH 412

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
             +P  ++YG LING+C  G +  A   + +M   G  P  V  NT+I G C++  A+  
Sbjct: 413 GYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDG 472

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
              L  M +EG  PD I+YN LI+G      ++ A  L   M      P+V T+N ++ G
Sbjct: 473 LRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRG 529

Query: 425 FCRQGRMHDSELIL 438
            C Q ++ ++  IL
Sbjct: 530 LCAQKKVEEARNIL 543



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 222/420 (52%), Gaps = 9/420 (2%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N+L++GL    + D+A  +  E+L    +P+  TYN L+   C+   M +A  +F +M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G+ P+  + +TL+      GQ+  AL  FREM++   +P +  + I++ G+   G V +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLC----RAKMLTEADDLFNEMLERGVFPDFYTFT 244
           AL    +M +    +   TYN +L GLC     A  L +A + F EM   GV PD  ++ 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            L+      G M +A  LF  MT     PDI+TYN L+DG+CK+G+  +A  L  +++  
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              PN  +Y I+IN YC +  V EA+ ++ +M+     P  V+ NT+I G+C++G    A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREE-NMDKAFALVSKMENQGLVPDVITYNVILT 423
            +  ++M   G     ++YNTLI+   ++   +  A  L +K+E  GL P ++TYN ++ 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           GFC   R+ ++ +  +  +E    P+  TY+ LI+G      +KEA +  ++M   G+ P
Sbjct: 358 GFCDARRLSEA-MQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 237/492 (48%), Gaps = 46/492 (9%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N L++        ++A +L   +      P   TYN LI G CK G+  +A  V  +M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG---- 149
            GL P+ +T NTLL+  C    MS A ++F EM      P   S + L+  F   G    
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 150 -----------------------------------QLDRALMYFREMKSAGLVPDNVLYT 174
                                              +L++A+ +F+EMK++G+ PD   Y 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+++    +G + EA  +   M    C  D++TYN +++G C+     EA  L  E+L+ 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P+ +T++ +I+ +CK   + +A  +F  M + +  P+ VT+NTLI GFCK G +E A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 295 NKLWADMISRKISPNYISYGILINGYC-SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
            KL+A+M         ++Y  LI+  C   G V  A  L+ ++ G G+ PT+V+ N++I+
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 354 GYCRSGDASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
           G+C +   S+A ++  +M  EG   P+ I+Y+ LI+G  +   M +A   +  M+  G  
Sbjct: 358 GFCDARRLSEAMQYFDEM--EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYT 415

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P V+TY  ++ GFC+ G +  + L   +M   G  P+   + TLI+G        +  R 
Sbjct: 416 PTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRL 475

Query: 473 HDEMLQRGFVPD 484
              M   G  PD
Sbjct: 476 LCHMHAEGCKPD 487



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 142/265 (53%), Gaps = 5/265 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCRE-GFLEEAFQLMNSMSGK 59
           ++   CK   ++ A     EME+ G     VTYNTLI++ C++ G +  A  L N + G 
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 343

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL P + TYNSLI G C   R   A +  DEM +   +P+  TY+ L+   C+   M EA
Sbjct: 344 GLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEA 402

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +   +M   G  P +V++  LI  F + G+L  AL++F +MK AG  P+ V++  +I+G
Sbjct: 403 AKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDG 462

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+     + L++   M  +GC  DV+TYN +++GLC A  + +A  LF+ M      P+
Sbjct: 463 LCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPN 519

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFD 264
             TF  LI G C    + +A N+ D
Sbjct: 520 VTTFNFLIRGLCAQKKVEEARNILD 544



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%)

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N L++G V     D+A  L  ++      P+  TYNV++ GFC+ G+MH +  +   M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            GL P+ ST  TL+ G      +  A +   EM    F+P  A
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSA 103


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 254/482 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+   I   +  L  M +    P+   YN +INA C  G   +A    N M  +G
Sbjct: 62  IILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG 121

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+N++IN  CK+G    A+++ D + +MG SP+   YNTL+    +   + +A 
Sbjct: 122 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 181

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM ++G+APD ++F+ L+    + G+ +      +++   GL+PD  L+ I ++G 
Sbjct: 182 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 241

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA++   +MLEKG    ++ +N+++    +A +  +A + +  M+  G+ P  
Sbjct: 242 CWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 301

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T ++L+ G   +G + +A  L   M +K +  + + +  L+D F K G++  A  LW +
Sbjct: 302 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 361

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P+ +++   I+G    G V EA+ ++ EM+ KG+ P   + N++I G+C+ G 
Sbjct: 362 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 421

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +    M   G+ PD  + N +I G  ++  M  A  +   M   GL PD+ITYN 
Sbjct: 422 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 481

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G+C+   M +++ ++ RM   G NPD +TY   I+G  S   +  A    DE++  G
Sbjct: 482 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 541

Query: 481 FV 482
            +
Sbjct: 542 IL 543



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 252/462 (54%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           ++G  P   T++ +I  +CR+G +     L++ M     +P  F YN +IN  C +GR  
Sbjct: 49  RRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTS 108

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A    + M++ G +P   T+NT++   C++ N+ EA ++F  +   G +P+ + ++TL+
Sbjct: 109 DALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLM 168

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             + +  ++D+A M + EM+  G+ PD + + I+++G+ + G   +  ++  ++   G +
Sbjct: 169 NGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLL 228

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D   ++  ++GLC A  L EA +   +MLE+G+ P    F ++I  + + G  +KA   
Sbjct: 229 PDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEA 288

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           + +M    + P   T ++L+ G    G +++A +L   MI + +S N +++ +L++ +  
Sbjct: 289 YKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFK 348

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V  A  LW EM  +GI P +V+ +  I G  + G   +A     +M+ +G+ P++ +
Sbjct: 349 RGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFA 408

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN+LI GF +   +++A  L   M ++GL+PD+ T N+I+ G C+QGRM  +  +   M 
Sbjct: 409 YNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH 468

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + GL+PD  TY TLING+    ++  A    + M   G  PD
Sbjct: 469 QTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPD 510



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 223/437 (51%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           +A +++  M   G++P       L   L + G      ++  ++++ G  P   T++ ++
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
           +  CRK  +   E +   M +    P+  +++ +I      G+   AL +F  M   G  
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
           P  V +  +IN +C+ G V+EA K+ D + E G   + + YNT++NG  + + + +A+ L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           + EM ++G+ PD  TF  L+ GH K G       L   ++   + PD   ++  + G C 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G +++A +   DM+ + +SP+ I++  +I  Y   G   +AF  +  MV  G+ P+  +
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           C++++ G   +G   +A E + +M+ +G+  +++++  L++ F +  ++  A +L  +ME
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEME 363

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G+ PDV+ ++  + G  +QG + ++  +   M+ KGL P+   Y +LI G      L 
Sbjct: 364 RRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLN 423

Query: 468 EAFRFHDEMLQRGFVPD 484
           EA +    M  RG +PD
Sbjct: 424 EALKLEKVMRHRGLLPD 440



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 230/467 (49%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           L  M + GV P       L     R G     ++L   +  +G +P  +T++ +I G C+
Sbjct: 9   LGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCR 68

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           KG     + +L  M +    P+   YN ++   C +   S+A   F  M  RG  P +V+
Sbjct: 69  KGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVT 128

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           F+T+I  F + G +  A   F  +K  G  P+ ++Y  ++NGY +   + +A  + +EM 
Sbjct: 129 FNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 188

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           +KG   D +T+N +++G  +     + D L  ++   G+ PD   F   + G C  G ++
Sbjct: 189 KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLD 248

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A+     M +K + P I+ +N++I  + + G  +KA + +  M+   ++P+  +   L+
Sbjct: 249 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 308

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
            G    G + EA  L  +M+ KG+    ++   ++  + + GD   A     +M   G+ 
Sbjct: 309 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF 368

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD ++++  I+G  ++  +++A+ +  +M  +GL+P+   YN ++ GFC+ G+++++  +
Sbjct: 369 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 428

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              M  +GL PD  T   +I G   Q  ++ A     +M Q G  PD
Sbjct: 429 EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPD 475



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 195/392 (49%), Gaps = 35/392 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAY-------------------- 40
           ++N   K  +ID A M   EM +KG+ PD +T+N L++ +                    
Sbjct: 167 LMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG 226

Query: 41  ---------------CREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                          C  G L+EA + +  M  KGL P +  +NS+I    + G  D+A 
Sbjct: 227 LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAF 286

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           E    M+  GL+P  +T ++LL+       + EA E+  +M  +G++ + ++F+ L+  F
Sbjct: 287 EAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKF 346

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G +  A   + EM+  G+ PD V ++  I+G  + G V EA  +  EML KG + + 
Sbjct: 347 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 406

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN+++ G C+   L EA  L   M  RG+ PD +T   +I G CK G M  A+N+F  
Sbjct: 407 FAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 466

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M Q  + PDI+TYNTLI+G+CK  +M  A+ L   M +   +P+  +Y I I+G+CS   
Sbjct: 467 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 526

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  A  +  E+V  GI     +C   +  + +
Sbjct: 527 MNRAVLMLDELVSAGILSFSFACPPTLNAHTK 558


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 149/466 (31%), Positives = 247/466 (53%), Gaps = 14/466 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M   G+ PD  T N L+N  C    + E   +M  +  +G  P + TY +LI GLC + 
Sbjct: 121 QMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEH 180

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM----SRRGV--AP 133
           R  +A  +   M ++G +P+  TY TL+   CR  N+S A ++  EM    S  G+   P
Sbjct: 181 RISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKP 240

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
            ++S+S +I    ++ + D A   F EMK  G+ P  + YT ++          EA ++ 
Sbjct: 241 VVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWE--------EAKRLF 292

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           +EM+ +G   +VVT+N +++ LC+   + EA DL   M++RG+ P+  T+ +LI G C  
Sbjct: 293 NEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLV 352

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G++N A  LF  M  K  +PD++ Y  LI+G+CK  ++E+A KL+  M+     P+  +Y
Sbjct: 353 GDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTY 412

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
           G L+ G    G V +A +L+  M   GI   L      + G C++G   +A E  +K+ S
Sbjct: 413 GALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKS 472

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
             +  D   +N LI+G  +   ++ A+ L  K+  + L PDV+TYN+++  FCR G++  
Sbjct: 473 YNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVK 532

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           + ++  +M + G  PD+ TY TLI G      L++       M+QR
Sbjct: 533 ANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 578



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 235/455 (51%), Gaps = 14/455 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC  +++      +  + ++G  PD VTY TLI   C E  + +A  L   M   G
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ------MGLSPDTATYNTLLVESCRKE 114
             P   TY +L+ GLC+ G    A ++  EML       +   P   +Y+ ++   C+  
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              EA ++F EM  +G+ P ++S+++L+         + A   F EM + G+ P+ V + 
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFN 308

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++I+  C+ G V+EA  + + M+++G V +++TYN+++ G C    L  A +LF  M  +
Sbjct: 309 VLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 368

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  PD   +T LI+G+CK   + +A+ L++ M Q   +PD+ TY  L+ G  + G++  A
Sbjct: 369 GCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDA 428

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            KL+  M    I  +   YGI +NG C  G + EA  L+ ++    IK  +   N +I G
Sbjct: 429 KKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDG 488

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C++G    A E   K+  E + PD ++YN +I+ F R   + KA  L  KME  G  PD
Sbjct: 489 LCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPD 548

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
            ITY  ++ GF    ++     +L  M+++ ++ D
Sbjct: 549 KITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 221/421 (52%), Gaps = 14/421 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLM------N 54
           ++  LC +H+I  A +    M++ G  P+ +TY TL+   CR G +  A +L       +
Sbjct: 172 LIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS 231

Query: 55  SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
           S+ G   KP V +Y+ +I+ LCK  R D A+++ +EM   G++P   +Y +L+ E     
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWE----- 286

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              EA+ +F EM  +GV P++V+F+ LI +  + G++  A      M   G+VP+ + Y 
Sbjct: 287 ---EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 343

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I G+C  G +  A ++   M  KGC  DV+ Y  ++NG C+   + EA  L+N ML+ 
Sbjct: 344 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 403

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  PD  T+  L+ G  + G +  A  LF +M    I  D+  Y   ++G CK G + +A
Sbjct: 404 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 463

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L+  + S  I  +   +  LI+G C  G +  A+ L+ ++  + ++P +V+ N +I  
Sbjct: 464 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 523

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           +CR G   KA+    KM   G  PD I+Y TLI GF   + ++K   L+  M  + +  D
Sbjct: 524 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583

Query: 415 V 415
           V
Sbjct: 584 V 584


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/435 (33%), Positives = 244/435 (56%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +KG   D  +    + A  R G +E   + +  M   G++  V ++ ++++GLCKKG   
Sbjct: 146 KKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVV 205

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           RAK ++DE++  G  P   TYNTLL      +++    EI   M +  V  ++ +++ LI
Sbjct: 206 RAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLI 265

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             +SR+ +++ A   F EM   G+ PD  +YT IIN  C+ G +  A  + DEM E+  V
Sbjct: 266 EWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLV 325

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            +  TY  ++NG C+A  +  A+ + N+M  +GV  +   F TL+ G+CK G +++AL L
Sbjct: 326 PNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL 385

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            +IM QK  + D  T N +  GFC+    E+A +L   M  R ++PN +S+ ILI+ YC 
Sbjct: 386 QNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCK 445

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
             +  EA RL+  M  KG  P++V+ N  I+ YC+ G   +A + +++M   G+ PD+ +
Sbjct: 446 EQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYT 505

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y +LI+G     N+D+A  L ++M   GL  +V+TY VI++G  + GR  ++  +   M 
Sbjct: 506 YTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMN 565

Query: 443 EKGLNPDRSTYTTLI 457
           ++G+ PD   Y++LI
Sbjct: 566 KEGIVPDDGIYSSLI 580



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/404 (33%), Positives = 216/404 (53%), Gaps = 8/404 (1%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D + EV D   + G   D  +    L+   R  NM    E   +M   G+   + S++ +
Sbjct: 135 DSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAV 194

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR---NGFVLEALKMRDEMLE 198
           +    + G++ RA     E+   G  P  + Y  ++NGY      G V E L +    +E
Sbjct: 195 VDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSL----ME 250

Query: 199 KGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           K  V  +V TY  ++    R+  + EA+ LF+EML++G+ PD Y +T++I+ +CK GNM 
Sbjct: 251 KNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMK 310

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A  LFD MT++ + P+  TY  LI+G CK GEM+ A  +  DM S+ +  N + +  L+
Sbjct: 311 RAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLM 370

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +GYC  G + EA RL   M  KG +    +CN I  G+CRS    +A   L  M   GV 
Sbjct: 371 DGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVA 430

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+ +S++ LI+ + +E+N  +A  L   ME +G  P V+TYN  +  +C++G+M ++  +
Sbjct: 431 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 490

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +  M E+GL PD  TYT+LI+G  +  N+  A    +EM Q G 
Sbjct: 491 INEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 534



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 225/408 (55%), Gaps = 6/408 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK  ++  AK  + E+  KG  P  +TYNTL+N Y     +    ++++ M    
Sbjct: 194 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 253

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V TY  LI    +  + + A+++ DEML+ G+ PD   Y +++  +C+  NM  A 
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 313

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ R + P+  ++  LI    + G++  A M   +M+S G+  + V++  +++GY
Sbjct: 314 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 373

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EAL++++ M +KG  +D  T N I +G CR+    EA  L   M ERGV P+ 
Sbjct: 374 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 433

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +F+ LI  +CK+ N  +A  LF +M +K   P +VTYN  I+ +CK G+ME+A KL  +
Sbjct: 434 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 493

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + P+  +Y  LI+G  + G+V  A  L+ EM   G+   +V+   II G  + G 
Sbjct: 494 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 553

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           A +A +   +M  EG+ PD   Y++LI       ++ K   LVS +EN
Sbjct: 554 ADEAFKLYDEMNKEGIVPDDGIYSSLI------ASLHKVGPLVSGLEN 595



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/191 (19%), Positives = 78/191 (40%), Gaps = 37/191 (19%)

Query: 331 RLWYEMVGKGIKPTLVS--CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           R+   + G+  +P++V   C+ + + Y  +     + E       +G + D  S    + 
Sbjct: 102 RIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLL 161

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              R  NM+     + +M + G+   V ++  ++ G C++G +  ++ ++  ++ KG  P
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221

Query: 449 DRSTYTTLINGHVS-----------------------------------QNNLKEAFRFH 473
              TY TL+NG++                                     + ++EA +  
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 281

Query: 474 DEMLQRGFVPD 484
           DEML++G  PD
Sbjct: 282 DEMLKKGIEPD 292


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/539 (29%), Positives = 270/539 (50%), Gaps = 59/539 (10%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
             C+  K+  A +   EM + G+ P+ V+Y T+IN+  + G + EAF L + M  +G+  
Sbjct: 19  GFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF 78

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + T  ++++GL K G+   A+EV + +L++ L+P+  TY+ LL   C+   M  AE + 
Sbjct: 79  DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 138

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M +  V P++++FS++I  +++ G L +A+   REM    ++P+ ++Y I+I+GY + 
Sbjct: 139 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 198

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G    A     EM  +      V ++ +LN L R   + EA  L  +M  +G+ PD   +
Sbjct: 199 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 258

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG-------------- 289
            +LI G+ K+GN   AL++   M +K+I+ D+V YN LI G  ++G              
Sbjct: 259 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIEL 318

Query: 290 ------EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA-------------- 329
                 + E A  +  +M S  I PN ++Y ILI G C  G V +A              
Sbjct: 319 GLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVP 378

Query: 330 ---------------------FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
                                 ++  ++V  G++ +L   NT+I  +CR G   KA   L
Sbjct: 379 TPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVL 438

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +MV  G+  D ++YN LI G+    +++KA    S+M   G+ P++ TYN +L G    
Sbjct: 439 DEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNA 498

Query: 429 GRMHDSELILWRMI----EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G M +      +++    E+GL P+ +TY  L++G+    N K+    H EM+ +GFVP
Sbjct: 499 GLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVP 557



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 243/492 (49%), Gaps = 61/492 (12%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ VTY+ L++ YC+ G +E A  ++  M  + + P V T++S+ING  KKG   +A +V
Sbjct: 113 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 172

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC-EMSRRGVAPDIVSFSTLIGIFS 146
           L EM+Q  + P+T  Y  +L++   K    +  + FC EM  R +    V F  L+    
Sbjct: 173 LREMVQRNVMPNTIVY-AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLK 231

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           R G++D A     +M S G+ PD V Y  +I+GY + G  L AL +  EM EK    DVV
Sbjct: 232 RVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVV 291

Query: 207 TYNTILNGLCR----------AKMLT----------EADDLFNEMLERGVFPDFYTFTTL 246
            YN ++ GL R          ++M+           +A D+ NEM   G+ P+  T+  L
Sbjct: 292 AYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNIL 351

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVT----------------------------- 277
           I G CK G + KA +  D M      P  +T                             
Sbjct: 352 IGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL 411

Query: 278 ------YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
                 YNTLI  FC++G   KA  +  +M+ R IS + ++Y  LI GYC+  HV +A +
Sbjct: 412 ELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALK 471

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE----GVDPDSISYNTLI 387
            + +M   GI P + + NT++ G   +G   +  E   K+VSE    G+ P++ +Y+ L+
Sbjct: 472 TYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILV 531

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G+ R  N  K   L  +M  +G VP + TYNV+++ + + G+M ++  +L  ++ KG  
Sbjct: 532 SGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRI 591

Query: 448 PDRSTYTTLING 459
           P+  TY  L  G
Sbjct: 592 PNSFTYDILTCG 603



 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 244/484 (50%), Gaps = 20/484 (4%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   G+ PD VT ++++  +CR G L EA  L   M   GL P   +Y ++IN L K GR
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A  +  +M+  G+S D  T  T++    +     EAEE+F  + +  +AP+ V++S 
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  + + G+++ A +  ++M+   + P+ + ++ IINGY + G + +A+ +  EM+++ 
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            + + + Y  +++G  +A     ADD   EM  R +      F  L++   + G M++A 
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 240

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +L   M  K I PDIV Y +LIDG+ K G    A  +  +M  + I  + ++Y  LI G 
Sbjct: 241 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 300

Query: 321 CSMG--------------------HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
             +G                       +A  +  EM   GI P  V+ N +I G C++G 
Sbjct: 301 LRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 360

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA+  L +M+     P  I++  L+  + R E  DK   +  K+   GL   +  YN 
Sbjct: 361 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 420

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++T FCR G    ++++L  M+++G++ D  TY  LI G+ + +++++A + + +M   G
Sbjct: 421 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 480

Query: 481 FVPD 484
             P+
Sbjct: 481 IAPN 484



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 224/419 (53%), Gaps = 22/419 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  ++D A+  + +M  KG+ PD V Y +LI+ Y +EG    A  ++  M  K 
Sbjct: 226 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 285

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V  YN+LI GL + G+ D  + V   M+++GL+PD           C+ E   +A 
Sbjct: 286 IRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPD-----------CKTE---DAL 330

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  EM   G+ P+ V+++ LIG   + G +++A     EM     VP  + +  ++  Y
Sbjct: 331 DILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY 390

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R+    + L++ ++++  G  + +  YNT++   CR  M  +A  + +EM++RG+  D 
Sbjct: 391 SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADL 450

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG----EMEKANK 296
            T+  LI G+C   ++ KAL  +  M    I P+I TYNTL+ G    G     ME+  K
Sbjct: 451 VTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEK 510

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L ++M  R + PN  +Y IL++GY  +G+  +   L  EM+ KG  PTL + N +I  Y 
Sbjct: 511 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 570

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR---EENMDKAFALVSKMENQGLV 412
           +SG   +A E L+ ++++G  P+S +Y+ L  G++    E  +D++     ++E + L+
Sbjct: 571 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLL 629



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 173/366 (47%), Gaps = 36/366 (9%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFL--------------------EEAFQL 52
           +A   + EM++K +  D V YN LI    R G                      E+A  +
Sbjct: 273 AALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDI 332

Query: 53  MNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCR 112
           +N M   G+ P   TYN LI GLCK G  ++A+  LDEML M   P   T+  L+    R
Sbjct: 333 LNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSR 392

Query: 113 KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
            E   +  +I  ++   G+   +  ++TLI +F R G   +A +   EM   G+  D V 
Sbjct: 393 SEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVT 452

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD----DLF 228
           Y  +I GYC    V +ALK   +M   G   ++ TYNT+L GL  A ++ E       L 
Sbjct: 453 YNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLV 512

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
           +EM ERG+ P+  T+  L+ G+ + GN  K + L   M  K   P + TYN LI  + K 
Sbjct: 513 SEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKS 572

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR------------LWYEM 336
           G+M +A +L  D++++   PN  +Y IL  G+ ++ +  E  R            L  EM
Sbjct: 573 GKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEM 632

Query: 337 VGKGIK 342
             KG+K
Sbjct: 633 GRKGLK 638


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 261/488 (53%), Gaps = 4/488 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+  L +M + G  P+++TYN+LI+ Y   G   E+ ++   MS  G
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 345

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCR---KENMS 117
           + P V   NS I+ L K GR + AK + D M+  G  PD  +Y+T     C         
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWV 405

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
               IF  M  +G+AP+   F+ LI  ++R G +D+A++ F +M++ G++PD V +  +I
Sbjct: 406 MWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 465

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  CR G + +AL   + M++ G       Y  ++ G C    L +A +L +EM+ + + 
Sbjct: 466 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 525

Query: 238 PD-FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
           P     F+++I+  CK+G + +  ++ D+M Q   +P++VT+N+L++G+C VG ME+A  
Sbjct: 526 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 585

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L   M S  I PN   YG L++GYC  G + +A  ++ +M+ KG+KPT V  + I+ G  
Sbjct: 586 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 645

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           ++   + A +   +M+  G      +Y  ++ G  R    D+A  L+ K+    +  D+I
Sbjct: 646 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 705

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           T+N++++   + GR  +++ +   +   GL P+  TY+ +I   + + + +EA      +
Sbjct: 706 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 765

Query: 477 LQRGFVPD 484
            + G   D
Sbjct: 766 EKSGHASD 773



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 258/476 (54%), Gaps = 5/476 (1%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           H+ D     +  + + G+ PD  +Y +LI  + ++G +++A  L   M  +G+ P +   
Sbjct: 190 HRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILIC 248

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           NS+I  LCK    D+A+ ++ +M+  G++PD  TY+ ++   C+ + M +AE +  +M  
Sbjct: 249 NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 308

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G  P+ +++++LI  +S +G  + ++  F++M S G++P        I+   ++G   E
Sbjct: 309 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 368

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCR---AKMLTEADDLFNEMLERGVFPDFYTFTT 245
           A  + D M+ KG   D+++Y+T  + +C      +     ++FN ML +G+ P+ + F  
Sbjct: 369 AKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNI 428

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI+ + + G M+KA+ +F+ M  K + PD VT+ T+I   C++G ++ A   +  M+   
Sbjct: 429 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 488

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS-CNTIIKGYCRSGDASKA 364
           + P+   YG LI G C+ G + +A  L  EM+ K I P  V   ++II   C+ G  ++ 
Sbjct: 489 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 548

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            + +  MV  G  P+ +++N+L+ G+    NM++AFAL+  M + G+ P+   Y  ++ G
Sbjct: 549 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 608

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +C+ GR+ D+  +   M+ KG+ P    Y+ +++G         A +   EM++ G
Sbjct: 609 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 664



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 208/394 (52%), Gaps = 1/394 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +   +D A +   +M+ KG+ PDTVT+ T+I++ CR G L++A    N M   G
Sbjct: 429 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 488

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES-CRKENMSEA 119
           + P    Y  LI G C  G   +AKE++ EM+   + P    Y + ++ + C++  ++E 
Sbjct: 489 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 548

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++I   M + G  P++V+F++L+  +   G ++ A      M S G+ P+  +Y  +++G
Sbjct: 549 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 608

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+NG + +AL +  +ML KG     V Y+ IL+GL +A+  T A  +F+EM+E G    
Sbjct: 609 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 668

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+  ++ G C++   ++A  L + +   ++K DI+T+N +I    KVG  ++A +L+ 
Sbjct: 669 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 728

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            + +  + PN  +Y ++I          EA  L+  +   G        N I++      
Sbjct: 729 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 788

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           + +KA  +LS +    +  ++ + + L + F RE
Sbjct: 789 EVAKASNYLSIIGENNLTLEASTISLLASLFSRE 822



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 193/411 (46%), Gaps = 1/411 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  KG+ P+   +N LINAY R G +++A  +   M  KG+ P   T+ ++I+ LC+ GR
Sbjct: 414 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 473

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS-FS 139
            D A    + M+ +G+ P  A Y  L+   C    + +A+E+  EM  + + P  V  FS
Sbjct: 474 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 533

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           ++I    + G++         M   G  P+ V +  ++ GYC  G + EA  + D M   
Sbjct: 534 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 593

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   +   Y T+++G C+   + +A  +F +ML +GV P    ++ ++HG  +      A
Sbjct: 594 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 653

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +F  M +      I TY  ++ G C+    ++AN L   + +  +  + I++ I+I+ 
Sbjct: 654 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 713

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
              +G   EA  L+  +   G+ P + + + +I    +     +AD     +   G   D
Sbjct: 714 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 773

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           S   N ++   + +  + KA   +S +    L  +  T +++ + F R+G+
Sbjct: 774 SRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 824



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 176/407 (43%), Gaps = 78/407 (19%)

Query: 119 AEEIFCEMSR----RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           A E+F  M R    R   P I +++ LI  + R  + D  L     +   GL PD+  Y+
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           +I  G+ ++G V                                    +A  LF EM+E+
Sbjct: 216 LIY-GFVKDGEV-----------------------------------DKAHCLFLEMMEQ 239

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           GV P      ++I   CK   M+KA ++   M    I PD+ TY+ +IDG CK   M+KA
Sbjct: 240 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 299

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            ++   M+     PN I+Y  LI+GY   G   E+ R++ +M   G+ PT+ +CN+ I  
Sbjct: 300 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 359

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNT----------------------------- 385
             + G  ++A      MV +G  PD ISY+T                             
Sbjct: 360 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGI 419

Query: 386 ---------LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
                    LIN + R   MDKA  +   M+N+G++PD +T+  +++  CR GR+ D+  
Sbjct: 420 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 479

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
               M++ G+ P  + Y  LI G  +   L +A     EM+ +   P
Sbjct: 480 KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 526



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 150/297 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ ++   K  +  M Q G  P+ VT+N+L+  YC  G +EEAF L+++M+  G
Sbjct: 535 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 594

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  + Y +L++G CK GR D A  V  +ML  G+ P +  Y+ +L    +    + A+
Sbjct: 595 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 654

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM   G    I ++  ++G   RN   D A M   ++ +  +  D + + I+I+  
Sbjct: 655 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 714

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA ++ D +   G V ++ TY+ ++  L + +   EAD+LF  + + G   D 
Sbjct: 715 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 774

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
                ++        + KA N   I+ + ++  +  T + L   F + G+  +  KL
Sbjct: 775 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKL 831


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/435 (33%), Positives = 244/435 (56%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +KG   D  +    + A  R G +E   + +  M   G++  V ++ ++++GLCKKG   
Sbjct: 150 KKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVV 209

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           RAK ++DE++  G  P   TYNTLL      +++    EI   M +  V  ++ +++ LI
Sbjct: 210 RAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLI 269

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             +SR+ +++ A   F EM   G+ PD  +YT IIN  C+ G +  A  + DEM E+  V
Sbjct: 270 EWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLV 329

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            +  TY  ++NG C+A  +  A+ + N+M  +GV  +   F TL+ G+CK G +++AL L
Sbjct: 330 PNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL 389

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            +IM QK  + D  T N +  GFC+    E+A +L   M  R ++PN +S+ ILI+ YC 
Sbjct: 390 QNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCK 449

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
             +  EA RL+  M  KG  P++V+ N  I+ YC+ G   +A + +++M   G+ PD+ +
Sbjct: 450 EQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYT 509

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y +LI+G     N+D+A  L ++M   GL  +V+TY VI++G  + GR  ++  +   M 
Sbjct: 510 YTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMN 569

Query: 443 EKGLNPDRSTYTTLI 457
           ++G+ PD   Y++LI
Sbjct: 570 KEGIVPDDGIYSSLI 584



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/404 (33%), Positives = 216/404 (53%), Gaps = 8/404 (1%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D + EV D   + G   D  +    L+   R  NM    E   +M   G+   + S++ +
Sbjct: 139 DSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAV 198

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR---NGFVLEALKMRDEMLE 198
           +    + G++ RA     E+   G  P  + Y  ++NGY      G V E L +    +E
Sbjct: 199 VDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSL----ME 254

Query: 199 KGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           K  V  +V TY  ++    R+  + EA+ LF+EML++G+ PD Y +T++I+ +CK GNM 
Sbjct: 255 KNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMK 314

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A  LFD MT++ + P+  TY  LI+G CK GEM+ A  +  DM S+ +  N + +  L+
Sbjct: 315 RAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLM 374

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +GYC  G + EA RL   M  KG +    +CN I  G+CRS    +A   L  M   GV 
Sbjct: 375 DGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVA 434

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+ +S++ LI+ + +E+N  +A  L   ME +G  P V+TYN  +  +C++G+M ++  +
Sbjct: 435 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 494

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +  M E+GL PD  TYT+LI+G  +  N+  A    +EM Q G 
Sbjct: 495 INEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 538



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 225/408 (55%), Gaps = 6/408 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK  ++  AK  + E+  KG  P  +TYNTL+N Y     +    ++++ M    
Sbjct: 198 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 257

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V TY  LI    +  + + A+++ DEML+ G+ PD   Y +++  +C+  NM  A 
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 317

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ R + P+  ++  LI    + G++  A M   +M+S G+  + V++  +++GY
Sbjct: 318 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 377

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EAL++++ M +KG  +D  T N I +G CR+    EA  L   M ERGV P+ 
Sbjct: 378 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 437

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +F+ LI  +CK+ N  +A  LF +M +K   P +VTYN  I+ +CK G+ME+A KL  +
Sbjct: 438 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 497

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + P+  +Y  LI+G  + G+V  A  L+ EM   G+   +V+   II G  + G 
Sbjct: 498 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 557

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           A +A +   +M  EG+ PD   Y++LI       ++ K   LVS +EN
Sbjct: 558 ADEAFKLYDEMNKEGIVPDDGIYSSLI------ASLHKVGPLVSGLEN 599



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/191 (19%), Positives = 78/191 (40%), Gaps = 37/191 (19%)

Query: 331 RLWYEMVGKGIKPTLVS--CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           R+   + G+  +P++V   C+ + + Y  +     + E       +G + D  S    + 
Sbjct: 106 RIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLL 165

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              R  NM+     + +M + G+   V ++  ++ G C++G +  ++ ++  ++ KG  P
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225

Query: 449 DRSTYTTLINGHVS-----------------------------------QNNLKEAFRFH 473
              TY TL+NG++                                     + ++EA +  
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 285

Query: 474 DEMLQRGFVPD 484
           DEML++G  PD
Sbjct: 286 DEMLKKGIEPD 296


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 250/478 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  + D A   + EME+ G  P  VTYN+LI++Y ++G LE+A  L   M  KG
Sbjct: 266 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 325

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V TY +LI+GL + G+ D A    DEM++ G  P+  TYN L+     +    E  
Sbjct: 326 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 385

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E    G  PDIV+++TL+ +F +NG        F+EMK AG +P+   Y  +I+ Y
Sbjct: 386 AVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 445

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G    A+++   M+E G   DV TYN +L+ L R     +A+ LF EM ER   PD 
Sbjct: 446 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 505

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y++++L+H +     ++K   L D +  + I+P      TL+    KV  + +A K + +
Sbjct: 506 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLE 565

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  ++ S +      +++ Y     V +  ++   M    I  +  + N+++  Y R GD
Sbjct: 566 LRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGD 625

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K +  L+++ S GV PD  SYNT+I  + R+  M +A  L S+M+  GL PDV+TYN+
Sbjct: 626 CEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNI 685

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            +  +       ++  ++  M+ +G  P+  TY +++ G+     L +A  F   + Q
Sbjct: 686 FVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 743



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 251/504 (49%), Gaps = 35/504 (6%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            +  M++ GV PD  TYNTLI+   R    +EA Q+ + M   G +P   T+NSL++   
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K  R D A EV+ EM ++G  P   TYN+L+    +   + +A  +  EM  +G+ PD+V
Sbjct: 272 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 331

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TLI    R G++D A++ + EM   G  P+   Y  +I  +   G   E + + DE 
Sbjct: 332 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 391

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
              G V D+VT+NT+L    +  + +E   +F EM + G  P+  T+ +LI  + + G  
Sbjct: 392 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 451

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A+ ++  M +  I PD+ TYN ++    + G  E+A KL+A+M  R   P+  SY  L
Sbjct: 452 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 511

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKP------TLVSCNT-------------------- 350
           ++ Y +   + +   L  ++  + I+P      TLV  N+                    
Sbjct: 512 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 571

Query: 351 ---------IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
                    ++  Y ++    K ++ LS M    ++  + +YN+L++ + R  + +K   
Sbjct: 572 SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCEN 631

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +++++++ G+ PD  +YN ++  + R+G+M ++  +   M   GL PD  TY   +  +V
Sbjct: 632 ILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYV 691

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDD 485
           S +  +EA      M+ +G  P++
Sbjct: 692 SNSMFEEAIELVRYMVTQGCKPNE 715



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 236/529 (44%), Gaps = 73/529 (13%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG-RCDRAKE 86
           PD   Y  L++A+ R G   +A  +   M   G++P + TYN +++   K         E
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++  M + G++PD  TYNTL +  CR+  +  EA ++F EM   G  PD V+F++L+ ++
Sbjct: 212 LVASMKEHGVAPDRYTYNTL-ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 270

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  + D A+   +EM+  G  P  V Y  +I+ Y ++G + +A+ ++ EM  KG   DV
Sbjct: 271 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 330

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY T+++GL RA  +  A   ++EM+  G  P+  T+  LI  H   G   + + +FD 
Sbjct: 331 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 390

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                  PDIVT+NTL+  F + G   + + ++ +M      P   +Y  LI+ Y   G 
Sbjct: 391 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 450

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              A +++  M+  GI P + + N ++    R G   +A++  ++M      PD  SY++
Sbjct: 451 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 510

Query: 386 LINGFVREENMDKAFALVSKMENQGLVP-------------------------------- 413
           L++ +   + +DK  AL   + ++ + P                                
Sbjct: 511 LLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 570

Query: 414 ---DVITYNVILTGFCRQGRMHDSELILWRMIEKGLN----------------------- 447
              D+   N +++ + +   +   E IL  M E  +N                       
Sbjct: 571 CSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 630

Query: 448 ------------PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                       PDR +Y T+I  +  +  +KEA R   EM   G  PD
Sbjct: 631 NILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPD 679



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 209/467 (44%), Gaps = 40/467 (8%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E+  +GV        T I    R G L EA  L+++  G    P    Y +L++   + G
Sbjct: 113 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG----PDAGAYTALVSAFSRAG 168

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLL-VESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           R   A  V   M+  G+ P   TYN +L V S       E  E+   M   GVAPD  ++
Sbjct: 169 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 228

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           +TLI    R      A   F EMK++G  PD V +  +++ Y +     EA+++  EM  
Sbjct: 229 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 288

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            GC   VVTYN++++   +  +L +A  L  EM  +G+ PD  T+TTLI G  + G ++ 
Sbjct: 289 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDA 348

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+  +D M +   KP++ TYN LI                              +G+   
Sbjct: 349 AIVEYDEMVRNGCKPNLCTYNALIK----------------------------MHGV--- 377

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
                G   E   ++ E    G  P +V+ NT++  + ++G  S+      +M   G  P
Sbjct: 378 ----RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP 433

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +  +Y +LI+ + R    D A  +  +M   G+ PDV TYN +L+   R GR   +E + 
Sbjct: 434 ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLF 493

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M E+   PD  +Y++L++ + +   L +     D++      P +
Sbjct: 494 AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 540



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 49/94 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  +  ++  A     EM+  G+ PD VTYN  + +Y      EEA +L+  M  +G
Sbjct: 651 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQG 710

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            KP   TYNS++ G C+ G+   AK  +  + Q+
Sbjct: 711 CKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 744


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/492 (31%), Positives = 245/492 (49%), Gaps = 24/492 (4%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++   K  L  M  +G YP+   +N+L++AYC+      A++L   M   G +PG   YN
Sbjct: 322 QLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYN 381

Query: 70  SLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
             I  +C           + A++   EML +G+  +    +      C      +A EI 
Sbjct: 382 IFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEII 441

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
           CEM  +G  PD  ++S +IG      ++++A + F EMK  G+VP    YTI+I+ +C+ 
Sbjct: 442 CEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKA 501

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +A    DEML   C  +VVTY ++++   +A+ + +A+ LF  ML  G  P+  T+
Sbjct: 502 GLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTY 561

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIK-----------------PDIVTYNTLIDGFC 286
           T LI GHCK G ++KA  ++  M Q  I+                 P+I+TY  L+DG C
Sbjct: 562 TALIDGHCKAGQIDKACQIYARM-QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLC 620

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K   +E+A++L   M      PN I Y  LI+G+C  G +  A  ++ +M  +G  P L 
Sbjct: 621 KANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLY 680

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + +++I    +        + LSKM+     P+ + Y  +I+G  +    ++A+ L+ KM
Sbjct: 681 TYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKM 740

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           E  G  P+VITY  ++ GF + G++     +   M  KG  P+  TY  LIN   S   L
Sbjct: 741 EEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLL 800

Query: 467 KEAFRFHDEMLQ 478
            EA R  DEM Q
Sbjct: 801 DEAHRLLDEMKQ 812



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 152/538 (28%), Positives = 258/538 (47%), Gaps = 60/538 (11%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LCK  +   A   L  +E++   PDTV YN +++  C     +EA  +++ M      P
Sbjct: 249 SLCKAGRCGDA---LSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIP 305

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V TY  L++G   KG+  R K +L  M+  G  P+   +N+L+   C+  + S A ++F
Sbjct: 306 NVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLF 365

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRN----------------------------------- 148
            +M + G  P  + ++  IG    N                                   
Sbjct: 366 KKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA 425

Query: 149 ------GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
                 G+ D+A     EM S G VPD+  Y+ +I   C    V +A  + +EM + G V
Sbjct: 426 RCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIV 485

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
             V TY  +++  C+A ++ +A + F+EML     P+  T+T+LIH + K   +  A  L
Sbjct: 486 PSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKL 545

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA----DMISRKI------------ 306
           F++M  +  KP++VTY  LIDG CK G+++KA +++A    D+ S  I            
Sbjct: 546 FEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCE 605

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           +PN I+YG L++G C    V EA  L   M   G +P  +  + +I G+C++G    A E
Sbjct: 606 TPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQE 665

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              KM   G  P+  +Y++LIN   +E+ +D    ++SKM      P+V+ Y  ++ G C
Sbjct: 666 VFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLC 725

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G+  ++  ++ +M E G  P+  TYT +I+G      +++    + +M  +G  P+
Sbjct: 726 KVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPN 783



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 244/499 (48%), Gaps = 22/499 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K D A   +CEM  KG  PD  TY+ +I   C    +E+AF L   M   G+ P 
Sbjct: 428 LCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPS 487

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  LI+  CK G   +A+   DEML+   +P+  TY +L+    +   + +A ++F 
Sbjct: 488 VYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFE 547

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M   G  P++V+++ LI    + GQ+D+A                 MYF+   +    P
Sbjct: 548 MMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETP 607

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + + Y  +++G C+   V EA ++ D M   GC  + + Y+ +++G C+   L  A ++F
Sbjct: 608 NIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVF 667

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M ERG  P+ YT+++LI+   K+  ++  L +   M + S  P++V Y  +IDG CKV
Sbjct: 668 VKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKV 727

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G+ E+A +L   M      PN I+Y  +I+G+  +G + +   L+ +M  KG  P  ++ 
Sbjct: 728 GKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITY 787

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C +G   +A   L +M          SY  +I GF RE     +  L+ ++  
Sbjct: 788 RVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNRE--FITSIGLLDELSE 845

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN---PDRSTYTTLINGHVSQNN 465
              VP    Y +++  F + GR+ +  L L   I    +    ++  YT+LI      + 
Sbjct: 846 NESVPVESLYRILIDNFIKAGRL-EGALNLLEEISSSPSLAVANKYLYTSLIESLSHASK 904

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           + +AF  +  M+ +  VP+
Sbjct: 905 VDKAFELYASMINKNVVPE 923



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 241/538 (44%), Gaps = 54/538 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C++   + A   L  ++  G      TYN LI  + R   L+ AF +   MS  G
Sbjct: 176 LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSG 235

Query: 61  LKPGVFTYNSLINGLCKKGRC--------------------------------DRAKEVL 88
            +    T       LCK GRC                                  A ++L
Sbjct: 236 FRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDIL 295

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           D M  +   P+  TY  LL     K  +   + I   M   G  P+   F++L+  + ++
Sbjct: 296 DRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKS 355

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN-----GFVLE-ALKMRDEMLEKGCV 202
                A   F++M   G  P  +LY I I   C N       +LE A K   EML+ G V
Sbjct: 356 RDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVV 415

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           ++ V  +     LC A    +A ++  EM+ +G  PD  T++ +I   C    + KA  L
Sbjct: 416 LNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLL 475

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M +  I P + TY  LID FCK G +++A   + +M+    +PN ++Y  LI+ Y  
Sbjct: 476 FEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLK 535

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV----SEGVD- 377
              V +A +L+  M+ +G KP +V+   +I G+C++G   KA +  ++M     S  +D 
Sbjct: 536 ARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDM 595

Query: 378 -----------PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
                      P+ I+Y  L++G  +   +++A  L+  M   G  P+ I Y+ ++ GFC
Sbjct: 596 YFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFC 655

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G++ +++ +  +M E+G  P+  TY++LIN    +  L    +   +ML+    P+
Sbjct: 656 KTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPN 713



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 208/450 (46%), Gaps = 51/450 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +++A  K  K+  A      M  +G  P+ VTY  LI+ +C+ G +++A Q+   M G  
Sbjct: 529 LIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDI 588

Query: 60  ---------------GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                             P + TY +L++GLCK  R + A E+LD M   G  P+   Y+
Sbjct: 589 ESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYD 648

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   +  A+E+F +MS RG  P++ ++S+LI    +  +LD  L    +M   
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN 708

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V+YT +I+G C+ G   EA ++  +M E GC  +V+TY  +++G  +   + + 
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQC 768

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            +L+ +M  +G  P+F T+  LI+  C  G +++A  L D M Q      I +Y  +I+G
Sbjct: 769 LELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEG 828

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           F +  E   +  L  ++   +  P    Y ILI+ +   G +  A  L  E+      P+
Sbjct: 829 FNR--EFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISS---SPS 883

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           L   N  +                              Y +LI        +DKAF L +
Sbjct: 884 LAVANKYL------------------------------YTSLIESLSHASKVDKAFELYA 913

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDS 434
            M N+ +VP++ T+  ++ G  R G+  ++
Sbjct: 914 SMINKNVVPELSTFVHLIKGLTRVGKWQEA 943



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 169/433 (39%), Gaps = 77/433 (17%)

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           Q+G S     YN L+             E+ C      V  D VS   L+ I   + +L 
Sbjct: 126 QIGYSHTPVVYNALI-------------ELLC---CNAVNNDRVSHKFLMQIRDDDRELL 169

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           R L+ F                 +I   CRNG    AL+    + + G      TYN ++
Sbjct: 170 RKLLNF-----------------LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALI 212

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
               RA  L  A  +  EM   G   D  T     +  CK G    AL+L +   ++   
Sbjct: 213 QVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLE---KEEFV 269

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           PD V YN ++ G C+    ++A  +   M S    PN ++Y IL++G    G +    R+
Sbjct: 270 PDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRI 329

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
              M+ +G  P     N+++  YC+S D S A +   KM+  G  P  + YN  I     
Sbjct: 330 LSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICS 389

Query: 393 EENM-----------------------------------------DKAFALVSKMENQGL 411
            E +                                         DKAF ++ +M ++G 
Sbjct: 390 NEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGF 449

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           VPD  TY+ ++   C   ++  + L+   M + G+ P   TYT LI+       +++A  
Sbjct: 450 VPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARN 509

Query: 472 FHDEMLQRGFVPD 484
           + DEML+    P+
Sbjct: 510 WFDEMLRDNCTPN 522



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 37/247 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K + A   + +ME+ G YP+ +TY  +I+ + + G +E+  +L   M  KG
Sbjct: 720 MIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG 779

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK------- 113
             P   TY  LIN  C  G  D A  +LDEM Q       ++Y  ++    R+       
Sbjct: 780 CAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGL 839

Query: 114 -ENMSEAEEIFCEMSRRGVAPDIVS---------------------------FSTLIGIF 145
            + +SE E +  E   R +  + +                            +++LI   
Sbjct: 840 LDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESL 899

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-- 203
           S   ++D+A   +  M +  +VP+   +  +I G  R G   EAL++ D + +  C +  
Sbjct: 900 SHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVCHVCS 959

Query: 204 DVVTYNT 210
           + V Y T
Sbjct: 960 NFVNYKT 966


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 256/481 (53%), Gaps = 3/481 (0%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG- 58
           ++  LC   +  D+  + L  M + G  PD  +Y  L+   C +   ++A  L++ M+  
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 199

Query: 59  KGLKP-GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           KG  P  V  Y ++INGL ++G+ D+A  + D ML  G SPD  TY++++    + + M 
Sbjct: 200 KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMD 259

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A ++F  M + GV PD + +++L+  +  +G+   A+  F++M   G+ PD V YT ++
Sbjct: 260 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 319

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  C+NG   EA K+ D ++++G   D  TY T+L+G      L E  DL + M+++G+ 
Sbjct: 320 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQ 379

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
              + F  ++  + K   +++AL +F  M Q+ + PDIV Y T++D  C  G ++ A   
Sbjct: 380 LGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQ 439

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  + S  ++PN + +  LI+G C+     +   L +EM+ +GI    +  N I+   C+
Sbjct: 440 FNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCK 499

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A      MV  G++P++ +YNTLI+G+  +  MD+A  L+  M   G+ P  +T
Sbjct: 500 KGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVT 559

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN I+ G+ + GR+ D   +L  M  KG+NP   TY  L+ G         A   +  M+
Sbjct: 560 YNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 619

Query: 478 Q 478
           +
Sbjct: 620 K 620



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 236/461 (51%), Gaps = 3/461 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE- 86
           P+  TY  +I    R G L+ AF  +  +   GL+     ++ L+ GLC + R   A + 
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDI 156

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS-RRGVAP-DIVSFSTLIGI 144
           VL  M ++G  PD  +Y  LL   C  +   +A ++   M+  +G  P D+V+++T+I  
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 216

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             R GQLD+A   F  M   G  PD V Y+ II+   +   + +A ++   M++ G + D
Sbjct: 217 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 276

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            + Y ++++G C +    EA  +F +M   GV PD  T+T L+   CK+G   +A  +FD
Sbjct: 277 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 336

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            + ++  KPD  TY TL+ G+   G + + + L   M+ + +   +  + +++  Y    
Sbjct: 337 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHN 396

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EA  ++  M  +G+ P +V+  T++   C +G    A    + + SEG+ P+ + + 
Sbjct: 397 KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFT 456

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI+G    +  DK   L  +M ++G+  D I +N I+   C++GR+ +++ +   M+  
Sbjct: 457 TLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRI 516

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G+ P+ +TY TLI+G+     + EA +    M+  G  P D
Sbjct: 517 GIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 557



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 222/449 (49%), Gaps = 13/449 (2%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL---SPDTATYN 104
           +A Q+ + +  +G +  +F  N  ++ + +      A  + + M + G    +P+ ATY 
Sbjct: 45  DAHQVFDRLLKRGDRASIFDLNRALSDVARASPA-VAISLFNRMPRAGATSAAPNIATYG 103

Query: 105 TLLVESCRKENMSEAEEIFCEMSR---RGVAPDIVSFSTLI-GIFSRNGQLDRALMYFRE 160
            +++  CR+  +   +  F  + R    G+    + FS L+ G+  R    D   +  R 
Sbjct: 104 -IVIGCCRR--LGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRR 160

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE-KG-CVMDVVTYNTILNGLCRA 218
           M   G  PD   YTI++ G C +    +AL +   M + KG C +DVV Y T++NGL R 
Sbjct: 161 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE 220

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
             L +A  LF+ ML+RG  PD  T++++I    K   M+KA  +F  M +  + PD + Y
Sbjct: 221 GQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMY 280

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            +L+ G+C  G+ ++A  ++  M    + P+ ++Y  L++  C  G  TEA +++  +V 
Sbjct: 281 TSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 340

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           +G KP   +  T++ GY   G   +  + L  M+ +G+      +N ++  + +   +D+
Sbjct: 341 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 400

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  + S M  QGL PD++ Y  +L   C  GR+ D+      +  +GL P+   +TTLI+
Sbjct: 401 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 460

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           G  + +   +      EM+ RG   D  F
Sbjct: 461 GLCTCDKWDKVEELAFEMIDRGICLDTIF 489


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/441 (32%), Positives = 243/441 (55%), Gaps = 8/441 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K +K D    F  +ME  G+  +  TYN LIN +CR   L  A  L+  M   G
Sbjct: 84  LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T NSL+NG C   R   A  ++D+M++MG  PDT T+ TL+         SEA 
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M +RG  PD+V++  ++    + G  D AL    +M++A +  + V+Y+ +I+  
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+     +AL +  EM  KG   +V+TY+++++ LC     ++A  L ++M+ER + P+ 
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ LI    K G + KA  L++ M ++SI P+I TY++LI+GFC +  + +A ++   
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +   PN ++Y  LING+C    V +   L+ EM  +G+    V+  T+I G+ ++ D
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     +MVS GV P+ ++YN L++G  +   + KA  +   ++   + PD+ TYN+
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503

Query: 421 ILTGFCRQGRMHDSELILWRM 441
           ++ G C+ G+        W+M
Sbjct: 504 MIEGMCKAGK--------WKM 516



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/453 (31%), Positives = 244/453 (53%), Gaps = 2/453 (0%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D ++D A      M Q   +P  + ++ L++A  +    +        M   G+   ++T
Sbjct: 56  DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           YN LIN  C+  R   A  +L +M+++G  PD  T N+LL   C    +S+A  +  +M 
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175

Query: 128 RRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
             G  PD V+F+TLI G+F  N +   A+     M   G  PD V Y  ++NG C+ G  
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHN-KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL + ++M       +VV Y+T+++ LC+ +   +A +LF EM  +GV P+  T+++L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I   C  G  + A  L   M ++ I P++VT++ LID F K G++ KA KL+ +MI R I
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            PN  +Y  LING+C +  + EA ++   M+ K   P +V+ NT+I G+C++    K  E
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              +M   G+  ++++Y TLI+GF +  + D A  +  +M + G+ P+++TYN++L G C
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           + G++  + ++   +    + PD  TY  +I G
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 241/442 (54%), Gaps = 1/442 (0%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L++A  L   M+     P +  ++ L++ + K  + D      ++M  +G+S +  TYN 
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   CR   +S A  +  +M + G  PDIV+ ++L+  F    ++  A+    +M   G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             PD V +T +I+G   +    EA+ + D M+++GC  D+VTY  ++NGLC+      A 
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +L N+M    +  +   ++T+I   CK  + + ALNLF  M  K ++P+++TY++LI   
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  G    A++L +DMI RKI+PN +++  LI+ +   G + +A +L+ EM+ + I P +
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            + +++I G+C      +A + L  M+ +   P+ ++YNTLINGF + + +DK   L  +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  +GLV + +TY  ++ GF +     +++++  +M+  G++P+  TY  L++G      
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478

Query: 466 LKEAFRFHDEMLQRGFVPDDAF 487
           L +A     E LQR  +  D +
Sbjct: 479 LAKAMVVF-EYLQRSTMEPDIY 499



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 119/244 (48%)

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y +  ++     D  ++ A+ LF +M Q    P I+ ++ L+    K+ + +        
Sbjct: 44  YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    IS N  +Y ILIN +C    ++ A  L  +M+  G +P +V+ N+++ G+C    
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A   + +MV  G  PD++++ TLI+G        +A AL+ +M  +G  PD++TY  
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G C++G    +  +L +M    +  +   Y+T+I+      +  +A     EM  +G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283

Query: 481 FVPD 484
             P+
Sbjct: 284 VRPN 287



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 86/158 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   ++  AK  L  M +K   P+ VTYNTLIN +C+   +++  +L   MS +G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L     TY +LI+G  +   CD A+ V  +M+ +G+ P+  TYN LL   C+   +++A 
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
            +F  + R  + PDI +++ +I    + G+     +YF
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/443 (31%), Positives = 246/443 (55%), Gaps = 4/443 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD V+YNT+I+   +EG +++A+   + M  + + P   TYNS+I  L K    DRA EV
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L  M+     P+  TYN+++   C      +A  IF +M   G+ PD+V++++L+    +
Sbjct: 69  LTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           NG+   A   F  M   GL PD   Y  +++GY   G ++E   +   M++ G  +D   
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N ++    + + + E   +F++M ++G+ P+   + T+I G CK G ++ A+  F+ M 
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K + P++V Y +LI   C   + EKA +L  +++ + I+PN + +  +++  C  G V 
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           E+ +L+  +   G+ P +++ +T+I GYC +G    A + L+ MVS G+ PDS++Y+TLI
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           NG+ +   M+ A AL  +ME+ G+ PD+ITYN+IL G  R  R   ++ +  R+ E G  
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQ 424

Query: 448 PDRSTYTTLINGHVSQNNLKEAF 470
            + STY  ++      N+L   F
Sbjct: 425 LELSTYNIILMDFAKTNSLMMHF 447



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 228/401 (56%), Gaps = 4/401 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL K   +D A   L  M    V P+  TYN++++ YC  G  E+A  +   M   G
Sbjct: 52  IIAALSKAQAMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDG 107

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TYNSL++ LCK G+C  A+++ D M++ GL PD  TY TLL     K  + E  
Sbjct: 108 IEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMH 167

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + G+  D   F+ LI  +++  ++D  ++ F +M+  GL P+ V Y  +I+G 
Sbjct: 168 DLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGL 227

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A+   ++M++KG   +VV Y ++++ LC      +A++L  E+L++G+ P+ 
Sbjct: 228 CKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNI 287

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F T++   CK+G + ++  LFD++    + PD++TY+TLIDG+C  G+M+ A KL   
Sbjct: 288 VFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTG 347

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + P+ ++Y  LINGYC +  + +A  L+ EM   G+ P +++ N I+ G  R+  
Sbjct: 348 MVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRR 407

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            + A E  +++   G   +  +YN ++  F +  ++   F 
Sbjct: 408 TAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFG 448



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 225/387 (58%), Gaps = 4/387 (1%)

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
           PD  +YNT++    ++ ++ +A   + EM  R V+PD V+++++I   S+   +DRA+  
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM-- 66

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
             E+ +  ++P+   Y  I++GYC +G   +A+ +  +M   G   DVVTYN++++ LC+
Sbjct: 67  --EVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
               TEA  +F+ M++RG+ PD  T+ TL+HG+   G + +  +L  +M Q  ++ D   
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           +N LI  + K  ++++   +++ M  + ++PN ++Y  +I+G C +G + +A   + +M+
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            KG+ P +V   ++I   C      KA+E + +++ +G++P+ + +NT+++   +E  + 
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           ++  L   + + G+ PDVITY+ ++ G+C  G+M  +  +L  M+  GL PD  TY+TLI
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           NG+   N +++A     EM   G  PD
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPD 391



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 164/287 (57%), Gaps = 4/287 (1%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  DVV+YNTI++GL +   + +A   ++EML+R V PD  T+ ++I    K   M++A+
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            +  +M    + P+  TYN+++ G+C  G+ EKA  ++  M S  I P+ ++Y  L++  
Sbjct: 67  EVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G  TEA +++  MV +G+KP + +  T++ GY   G   +  + L+ MV  G+  D 
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
             +N LI  + ++E +D+   + SKM  QGL P+ + Y  ++ G C+ GR+ D+ L   +
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           MI+KGL P+   YT+LI+   + +  ++A     E+L +G  P+  F
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVF 289


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 250/478 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  + D A   + EME+ G  P  VTYN+LI++Y ++G LE+A  L   M  KG
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V TY +LI+GL + G+ D A    DEM++ G  P+  TYN L+     +    E  
Sbjct: 344 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E    G  PDIV+++TL+ +F +NG        F+EMK AG +P+   Y  +I+ Y
Sbjct: 404 AVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 463

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G    A+++   M+E G   DV TYN +L+ L R     +A+ LF EM ER   PD 
Sbjct: 464 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y++++L+H +     ++K   L D +  + I+P      TL+    KV  + +A K + +
Sbjct: 524 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLE 583

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  ++ S +      +++ Y     V +  ++   M    I  +  + N+++  Y R GD
Sbjct: 584 LRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGD 643

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K +  L+++ S GV PD  SYNT+I  + R+  M +A  L S+M+  GL PDV+TYN+
Sbjct: 644 CEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNI 703

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            +  +       ++  ++  M+ +G  P+  TY +++ G+     L +A  F   + Q
Sbjct: 704 FVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 761



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 251/504 (49%), Gaps = 35/504 (6%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            +  M++ GV PD  TYNTLI+   R    +EA Q+ + M   G +P   T+NSL++   
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           K  R D A EV+ EM ++G  P   TYN+L+    +   + +A  +  EM  +G+ PD+V
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 349

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TLI    R G++D A++ + EM   G  P+   Y  +I  +   G   E + + DE 
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 409

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
              G V D+VT+NT+L    +  + +E   +F EM + G  P+  T+ +LI  + + G  
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A+ ++  M +  I PD+ TYN ++    + G  E+A KL+A+M  R   P+  SY  L
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKP------TLVSCNT-------------------- 350
           ++ Y +   + +   L  ++  + I+P      TLV  N+                    
Sbjct: 530 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 589

Query: 351 ---------IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
                    ++  Y ++    K ++ LS M    ++  + +YN+L++ + R  + +K   
Sbjct: 590 SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCEN 649

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +++++++ G+ PD  +YN ++  + R+G+M ++  +   M   GL PD  TY   +  +V
Sbjct: 650 ILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYV 709

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDD 485
           S +  +EA      M+ +G  P++
Sbjct: 710 SNSMFEEAIELVRYMVTQGCKPNE 733



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 236/529 (44%), Gaps = 73/529 (13%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG-RCDRAKE 86
           PD   Y  L++A+ R G   +A  +   M   G++P + TYN +++   K         E
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++  M + G++PD  TYNTL +  CR+  +  EA ++F EM   G  PD V+F++L+ ++
Sbjct: 230 LVASMKEHGVAPDRYTYNTL-ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  + D A+   +EM+  G  P  V Y  +I+ Y ++G + +A+ ++ EM  KG   DV
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 348

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY T+++GL RA  +  A   ++EM+  G  P+  T+  LI  H   G   + + +FD 
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                  PDIVT+NTL+  F + G   + + ++ +M      P   +Y  LI+ Y   G 
Sbjct: 409 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
              A +++  M+  GI P + + N ++    R G   +A++  ++M      PD  SY++
Sbjct: 469 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 528

Query: 386 LINGFVREENMDKAFALVSKMENQGLVP-------------------------------- 413
           L++ +   + +DK  AL   + ++ + P                                
Sbjct: 529 LLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 588

Query: 414 ---DVITYNVILTGFCRQGRMHDSELILWRMIEKGLN----------------------- 447
              D+   N +++ + +   +   E IL  M E  +N                       
Sbjct: 589 CSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 648

Query: 448 ------------PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                       PDR +Y T+I  +  +  +KEA R   EM   G  PD
Sbjct: 649 NILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPD 697



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 209/467 (44%), Gaps = 40/467 (8%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E+  +GV        T I    R G L EA  L+++  G    P    Y +L++   + G
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG----PDAGAYTALVSAFSRAG 186

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLL-VESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           R   A  V   M+  G+ P   TYN +L V S       E  E+   M   GVAPD  ++
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 246

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           +TLI    R      A   F EMK++G  PD V +  +++ Y +     EA+++  EM  
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            GC   VVTYN++++   +  +L +A  L  EM  +G+ PD  T+TTLI G  + G ++ 
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDA 366

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+  +D M +   KP++ TYN LI                              +G+   
Sbjct: 367 AIVEYDEMVRNGCKPNLCTYNALIK----------------------------MHGV--- 395

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
                G   E   ++ E    G  P +V+ NT++  + ++G  S+      +M   G  P
Sbjct: 396 ----RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP 451

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           +  +Y +LI+ + R    D A  +  +M   G+ PDV TYN +L+   R GR   +E + 
Sbjct: 452 ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLF 511

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             M E+   PD  +Y++L++ + +   L +     D++      P +
Sbjct: 512 AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 558



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 49/94 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  +  ++  A     EM+  G+ PD VTYN  + +Y      EEA +L+  M  +G
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQG 728

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            KP   TYNS++ G C+ G+   AK  +  + Q+
Sbjct: 729 CKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 762


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 262/521 (50%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCK  ++  A+    +ME +   P    YNT+I  Y   G  E+A++L+  +  +G
Sbjct: 156 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 215

Query: 61  LKPGVF----------------------------------TYNSLINGLCKKGRCDRAKE 86
             P V                                   TYN +I+ LC  GR + A  
Sbjct: 216 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYR 275

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           +LDEM    L P+  T N ++   C+   + EA +IF   S+RG  PD V++ +LI    
Sbjct: 276 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 335

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + GQ+D A   F +M  AG   + V+YT +I  +  +G   +  K+  E++ +GC  D+ 
Sbjct: 336 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLT 395

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
             NT ++ + +A  + +   +F ++   G  PD  +++ LIHG  K G   +  N+F  M
Sbjct: 396 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 455

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            Q+    D   YN ++DGFCK G++ KA ++  +M  + + P   +YG +++G   +  +
Sbjct: 456 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 515

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA+ L+ E   KGI+  +V  +++I G+ + G   +A   L +M+ +G+ P+  ++N+L
Sbjct: 516 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 575

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR-MIEKG 445
           ++  V+ E +++A      M+     P+  TY++++ G CR  + ++   + W+ M ++G
Sbjct: 576 LDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK-YNKAFVFWQDMQKQG 634

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L P+  TYTT+I+G     N+ +A+   +     G +PD A
Sbjct: 635 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 675



 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 255/540 (47%), Gaps = 71/540 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL +  + + A   L +M++ G       + TL+ A  REG + +A  L++ + G  
Sbjct: 51  LIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSC 110

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P +  YN  I+   K G  D A +   E+   GL PD  +Y +++   C+   + EAE
Sbjct: 111 LEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAE 170

Query: 121 EIFCEMS-----------------------------------RRGVAPDIVSFSTLIGIF 145
           E+F +M                                     RG  P +VSF++++   
Sbjct: 171 ELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCL 230

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  ++D AL  F  MK     P++  Y III+  C  G V EA ++ DEM       ++
Sbjct: 231 GKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNL 289

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +T N +++ LC+A+ L EA  +F    +RG  PD  T+ +LI G  K G +++A  LF+ 
Sbjct: 290 LTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK 349

Query: 266 M-----------------------------------TQKSIKPDIVTYNTLIDGFCKVGE 290
           M                                    ++  KPD+   NT +D   K GE
Sbjct: 350 MLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGE 409

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           +EK   ++ D+ S    P+  SY ILI+G    G   E   +++ M  +G      + N 
Sbjct: 410 VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNA 469

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++ G+C+SG   KA E L +M  + V P   +Y  +++G  + + +D+A+ L  + +++G
Sbjct: 470 VVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 529

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           +  +V+ Y+ ++ GF + GR+ ++ LIL  M++KGL P+  T+ +L++  V    + EA 
Sbjct: 530 IELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 589



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 245/515 (47%), Gaps = 36/515 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +  AL +  ++D A + +  M +    P    Y  LI A       E A +L+  M   G
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            + GV  + +L+  L ++G+   A  ++DE+    L PD   YN  +    +  N+  A 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F E+  +G+ PD VS++++I +  + G+L  A   F +M++   VP    Y  +I GY
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G   +A K+ + + E+GC+  VV++N+IL  L + + + EA  LF E++++   P+ 
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNS 254

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I   C  G + +A  + D M   S+ P+++T N ++D  CK  ++E+A K++  
Sbjct: 255 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 314

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRL---------------------------- 332
              R  +P+ ++Y  LI+G    G V EA+RL                            
Sbjct: 315 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 374

Query: 333 -------WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
                  + E++ +G KP L   NT +    ++G+  K       + S G  PD  SY+ 
Sbjct: 375 KEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 434

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  +     +   +   M+ QG   D   YN ++ GFC+ G++H +  IL  M EK 
Sbjct: 435 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 494

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + P  +TY  +++G    + L EA+   +E   +G
Sbjct: 495 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 529



 Score = 45.1 bits (105), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 46/108 (42%)

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P   +Y  LI         ++A  L+ +M+  G    V  +  ++    R+G++ D+  +
Sbjct: 43  PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 102

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +  +    L PD   Y   I+      N+  A +F  E+  +G  PDD
Sbjct: 103 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDD 150


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 255/465 (54%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
            +  Y +   Y  ++    R   L+++  L   M      P +  ++ L++ + K  + D
Sbjct: 39  SRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
               + ++M  +G+  +  T N LL   CR   +S A     +M + G  P IV+F +L+
Sbjct: 99  VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F R  ++  AL  F +M   G  P+ V+Y  II+G C++  V  AL + + M + G  
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DVVTYN++++GLC +   ++A  + + M +R ++PD +TF  LI    K+G +++A   
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           ++ M ++S+ PDIVTY+ LI G C    +++A +++  M+S+   P+ ++Y ILINGYC 
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
              V    +L+ EM  +G+    V+   +I+GYCR+G  + A+E   +MV  GV P+ I+
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YN L++G      ++KA  +++ M+  G+  D++TYN+I+ G C+ G + D+  I   + 
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            +GL PD  TYTT++ G   +   +EA     +M + G +P++ +
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECY 503



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 129/379 (34%), Positives = 215/379 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++  A  FL +M + G  P  VT+ +L+N +CR   + +A  + + M G G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V  YN++I+GLCK  + D A ++L+ M + G+ PD  TYN+L+   C     S+A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M++R + PD+ +F+ LI    + G++  A  ++ EM    L PD V Y+++I G 
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA +M   M+ KGC  DVVTY+ ++NG C++K +     LF EM +RGV  + 
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI G+C+ G +N A  +F  M    + P+I+TYN L+ G C  G++EKA  + AD
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +  + ++Y I+I G C  G V +A+ ++  +  +G+ P + +  T++ G  + G 
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481

Query: 361 ASKADEFLSKMVSEGVDPD 379
             +AD    KM  +G+ P+
Sbjct: 482 RREADALFRKMKEDGILPN 500



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 225/414 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D       +M+  G+  +  T N L+N +CR   L  A   +  M   G
Sbjct: 87  LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T+ SL+NG C+  R   A  + D+M+ MG  P+   YNT++   C+ + +  A 
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M + G+ PD+V++++LI     +G+   A      M    + PD   +  +I+  
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V EA +  +EM+ +    D+VTY+ ++ GLC    L EA+++F  M+ +G FPD 
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ LI+G+CK   +   + LF  M+Q+ +  + VTY  LI G+C+ G++  A +++  
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN I+Y +L++G C  G + +A  +  +M   G+   +V+ N II+G C++G+
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            + A +    +  +G+ PD  +Y T++ G  ++    +A AL  KM+  G++P+
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 232/438 (52%), Gaps = 1/438 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           DS  +F   M Q    P    ++ L++A  +    +    L   M   G+   + T N L
Sbjct: 64  DSLDLFF-HMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           +N  C+  +   A   L +M+++G  P   T+ +LL   CR + + +A  +F +M   G 
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P++V ++T+I    ++ Q+D AL     M+  G+ PD V Y  +I+G C +G   +A +
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           M   M ++    DV T+N +++   +   ++EA++ + EM+ R + PD  T++ LI+G C
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
               +++A  +F  M  K   PD+VTY+ LI+G+CK  ++E   KL+ +M  R +  N +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y ILI GYC  G +  A  ++  MV  G+ P +++ N ++ G C +G   KA   L+ M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
              G+D D ++YN +I G  +   +  A+ +   +  QGL+PD+ TY  ++ G  ++G  
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482

Query: 432 HDSELILWRMIEKGLNPD 449
            +++ +  +M E G+ P+
Sbjct: 483 READALFRKMKEDGILPN 500


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/607 (28%), Positives = 278/607 (45%), Gaps = 123/607 (20%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+LC   K+  A+  L +M+   + P+ VTYNT++N Y ++G  + A ++++ M   G
Sbjct: 236 VLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNG 294

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  ++TYN +I+ LCK  R  RA  +L  M ++ L+PD  +YNTL+     +  ++ A 
Sbjct: 295 IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAI 354

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK------------------ 162
            IF +M R+ + P + +++ LI  + RNG+ D A     EM+                  
Sbjct: 355 YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKC 414

Query: 163 --SAGLVPDNVLYTIIIN-------------------------------GYCRNGFVLEA 189
             + G+ PD + Y+ +IN                                YC+ G VLEA
Sbjct: 415 MLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEA 474

Query: 190 LKMRDEM-----------------------------------LEKGCVMDVVTYNTILNG 214
             + D M                                   LEK C +D  T NT+L G
Sbjct: 475 FSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVG 534

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           +C+   L EA DL  +M+ R + PD YT+T L+ G CK G +  AL L  +M +K + PD
Sbjct: 535 ICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPD 594

Query: 275 I------------------------------------VTYNTLIDGFCKVGEMEKANKLW 298
                                                + YN++++G+ K G++ +  +L 
Sbjct: 595 TIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLM 654

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M   ++ P+  SY IL++GY   G ++    L+ +MV +GIKP  V+   +I G C  
Sbjct: 655 RNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEY 714

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G    A +FL KMV EGV PD+++++ LI  F  +  M  A  L S M+   + P   TY
Sbjct: 715 GLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTY 774

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++ G  R+  +  S  IL  M+E GL P  + Y  LIN      ++  AF   ++M  
Sbjct: 775 VAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKA 834

Query: 479 RGFVPDD 485
            G VP +
Sbjct: 835 LGVVPSE 841



 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 250/485 (51%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+   +  AK F+  + +K    D  T NTL+   C+ G L+EA  L   M  + 
Sbjct: 496 LLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 555

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TY  L++G CK+G+   A  +L  ML+ GL PDT  Y  LL     +  +  A 
Sbjct: 556 ILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAAS 615

Query: 121 EIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +F E+  + G+  D +++++++  + + GQ++      R M    + P +  Y I+++G
Sbjct: 616 YMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 675

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y + G +   L +  +M+++G   D VTY  ++ GLC   ++  A     +M+  GVFPD
Sbjct: 676 YIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPD 735

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F  LI    +   M+ AL LF  M    + P   TY  +++G  +   ++++ ++  
Sbjct: 736 NLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILH 795

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM+   + P +  Y  LIN  C +G +  AF L  +M   G+ P+ V+ ++I++G C+ G
Sbjct: 796 DMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCG 855

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A    S ++  G+ P   ++ TL++G  +E  +D AF L   ME+ GL  DV+TYN
Sbjct: 856 KVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 915

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++TG C +  + D+  +   M  KGL P+ +TY TL     +   +++  +   ++  R
Sbjct: 916 VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 975

Query: 480 GFVPD 484
           G VP 
Sbjct: 976 GIVPS 980



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 254/506 (50%), Gaps = 26/506 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NAL   +K +   +FL E   +    D  T N ++N+ C +G L +A  ++  M    
Sbjct: 201 ILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCR 260

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   TYN+++N   KKGRC  A  +LD+M + G+  D  TYN ++ + C+ +  + A 
Sbjct: 261 L-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAY 319

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M    + PD  S++TLI  F   G+++ A+  F +M    L P    YT +I+GY
Sbjct: 320 LLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGY 379

Query: 181 CRNGFVLEALKMRDE--------------------MLEKGCVMDVVTYNTILNGLCRAKM 220
           CRNG   EA ++  E                    ML  G   DV+TY+ ++N      M
Sbjct: 380 CRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALIN----EGM 435

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           + EA+     M    +  D  +F  +I  +C+ GN+ +A +++D M +    PDI TY +
Sbjct: 436 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGS 495

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           L+ G C+ G + +A +    ++ +  + +  +   L+ G C  G + EA  L  +MV + 
Sbjct: 496 LLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 555

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           I P   +   ++ G+C+ G    A   L  M+ +G+ PD+I+Y  L+NG V E  +  A 
Sbjct: 556 ILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAAS 615

Query: 401 ALVSKME-NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            +  ++   +GL  D I YN ++ G+ + G++++ E ++  M E  + P  ++Y  L++G
Sbjct: 616 YMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 675

Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++ +  L      + +M++ G  PD+
Sbjct: 676 YIKKGQLSRTLYLYRDMVKEGIKPDN 701



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 157/345 (45%), Gaps = 35/345 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N   K  +I+  +  +  M +  VYP + +YN L++ Y ++G L     L   M  +G
Sbjct: 637 MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 696

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   TY  LI GLC+ G  + A + L++M+  G+ PD   ++ L+     K  MS A 
Sbjct: 697 IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNAL 756

Query: 121 EIFC-----------------------------------EMSRRGVAPDIVSFSTLIGIF 145
           ++F                                    +M   G+ P    +  LI   
Sbjct: 757 QLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAK 816

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G +D A     +MK+ G+VP  V  + I+ G C+ G V EA+ +   ++  G V  +
Sbjct: 817 CRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTI 876

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T+ T+++GLC+   + +A  L   M   G+  D  T+  LI G C    +  AL+L++ 
Sbjct: 877 ATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEE 936

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           M  K + P+I TY TL       G M+   KL  D+  R I P+Y
Sbjct: 937 MKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSY 981



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 36/220 (16%)

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY------ 355
           ISR    N  S  +L+N Y   G V +A    + M   G K +L SCN I+         
Sbjct: 152 ISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKS 211

Query: 356 -----------------------------CRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
                                        C  G  SKA+  L KM +  + P++++YNT+
Sbjct: 212 EYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTI 270

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           +N +V++     A  ++  ME  G+  D+ TYN+++   C+  R   + L+L RM E  L
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            PD  +Y TLI+G   +  +  A    ++ML++   P  A
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVA 370


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/481 (30%), Positives = 259/481 (53%), Gaps = 6/481 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK++++D A   L EM  KG  PD V+Y T+I++  + G +EEA +L        
Sbjct: 190 LLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIR 244

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN+LING C++ +      +L +M++ G+ P+  TY+T++       N+  A 
Sbjct: 245 FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +M  RG +P++ +F++L+  +   G++  AL  +  M   G  P+ V Y  +I+G 
Sbjct: 305 AVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + EA+ +  +M   GC  +V TY  +++G  +A  L  A +++N+M+  G  P+ 
Sbjct: 365 CSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNV 424

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T++++  C+    ++A +L + M+  +  P+ VT+NT I G C  G +E A  L+  
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQ 484

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     SPN  +Y  +++G      + EA  L  EM  KG++  LV+ NTI  G+C  G 
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG-LVPDVITYN 419
             +A + L KM+  GV PD+I+YNTL   +  +  +  A  L+ K+   G  VP+V  Y 
Sbjct: 545 FEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYT 604

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L G C Q  + ++ L L +M+ +G+  + +T+  L+ G  +           D++L  
Sbjct: 605 SLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILTS 664

Query: 480 G 480
           G
Sbjct: 665 G 665



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 260/484 (53%), Gaps = 5/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L ++  +D  +  L +M+ +G+      +  +IN Y R G  E+A ++   +   G
Sbjct: 85  MIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFG 144

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN L++ +  + R    + +   M + G  P+  TYN LL   C+   +  A 
Sbjct: 145 CQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGAC 204

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS +G  PD+VS++T+I   S+ G+++ A    RE+ S    P+  +Y  +ING+
Sbjct: 205 KLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA----REL-SIRFQPNVSVYNALINGF 259

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   V E   +  +M+EKG   +V+TY+T+++ L     +  A  ++ +M  RG  P+ 
Sbjct: 260 CREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNV 319

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTFT+L+ G+   G + +ALN+++ M ++  +P++V YNTLI G C  G+M +A  + + 
Sbjct: 320 YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     SPN  +YG LI+G+   G +  A  +W +M+  G  P +V   +++   CRS  
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A   + KM ++   P+++++NT I G      ++ A  L  +ME  G  P++ TYN 
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNE 499

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G  ++ R+ ++  ++  M EKG+  +  TY T+  G  +    +EA +   +ML  G
Sbjct: 500 VLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGG 559

Query: 481 FVPD 484
             PD
Sbjct: 560 VKPD 563



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 175/349 (50%), Gaps = 5/349 (1%)

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           +++  +I    R   +D      ++MK  G+     L+  +IN Y R G   +ALKM   
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           + E GC   V  YN +L+ +         + +++ M   G  P+ YT+  L+   CK+  
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           ++ A  L   M+ K  +PD+V+Y T+I    K+G++E+A +L     S +  PN   Y  
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNA 254

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LING+C    V E F L  +MV KGI P +++ +T+I      G+   A    +KM   G
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRG 314

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             P+  ++ +L+ G+     + +A  + ++M  +G  P+V+ YN ++ G C  G+M ++ 
Sbjct: 315 CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAV 374

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  +M   G +P+ STY  LI+G     +L  A    ++M+  G +P+
Sbjct: 375 SVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPN 423



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 31/257 (12%)

Query: 259 ALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           A N F  I   K+ +   +TY  +I+   +  +++    L   M    IS +   +  +I
Sbjct: 62  ASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVI 121

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           N Y  +G   +A +++Y +   G +PT+   N ++            +   S M  +G +
Sbjct: 122 NTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKE 181

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT-------------------- 417
           P+  +YN L+    +   +D A  L+ +M N+G  PDV++                    
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL 241

Query: 418 ----------YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
                     YN ++ GFCR+ ++ +  L+L +M+EKG++P+  TY+T+I+      N++
Sbjct: 242 SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301

Query: 468 EAFRFHDEMLQRGFVPD 484
            A     +M  RG  P+
Sbjct: 302 LALAVWAKMFVRGCSPN 318


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 240/485 (49%), Gaps = 4/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+   +  A  +L  M + G  PD  T+N+LI  YCR   ++ A  L + M  +G
Sbjct: 159 VIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG 218

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V +Y +LI GLC+ GR D A E+  EM Q    PD   Y  L+   C  E   E  
Sbjct: 219 FAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGL 274

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G  P   +++ ++    R  +   A    +EM   GL P  V  T +IN Y
Sbjct: 275 LMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 334

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +AL++ + M  +GC  +V TYN ++ G C    + +A  L N+M   GV PD 
Sbjct: 335 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDA 394

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G C DG++  A  L  +M    +  D  TYN LI+  CK G  ++A  L+  
Sbjct: 395 VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS 454

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +R I PN +++  LING C  G    A++   +MV  G  P   + ++ I+  C+   
Sbjct: 455 LETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG 514

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + +   F+ +M+ + V P +++Y  +I+  ++E N         +M + G  PDV+TY  
Sbjct: 515 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTT 574

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  +C +GR++++E +L  M + G+  D   Y TL++GH S      A     +M    
Sbjct: 575 SMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVA 634

Query: 481 FVPDD 485
            VP+ 
Sbjct: 635 SVPNQ 639



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 226/453 (49%), Gaps = 5/453 (1%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLK-PGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           + +L+    R      A +L   M       P   TYN++I  LC++    RA   L  M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           ++ G  PD  T+N+L+V  CR   +  A ++F +M  RG A D+VS++TLI      G++
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D A+  F EM      PD  +Y  ++ G C      E L M   M E G       Y  +
Sbjct: 240 DEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++  CR +   EA+++  EM E+G+ P   T T +I+ +CK+G M+ AL + ++M  +  
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 355

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           KP++ TYN L+ GFC  G++ KA  L   M +  ++P+ ++Y +LI G C  GH+  AFR
Sbjct: 356 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 415

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L   M G G+     + N +I   C+ G   +A      + + G+ P+++++N+LING  
Sbjct: 416 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLC 475

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +    D A+  + KM + G  PD  TY+  +   C+     +    +  M++K + P   
Sbjct: 476 KSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTV 535

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            YT +I+  + + N     R   EM+  G  PD
Sbjct: 536 NYTIVIHKLLKERNYGLVARTWGEMVSSGCNPD 568



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 237/486 (48%), Gaps = 21/486 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  +ID A     EM+Q    PD   Y  L+   C     EE   ++  M   G
Sbjct: 229 LIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELG 284

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P    Y ++++  C++ +   A+E+L EM + GL+P   T   ++   C++  MS+A 
Sbjct: 285 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 344

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  RG  P++ +++ L+  F   G++ +A+    +M++ G+ PD V Y ++I G 
Sbjct: 345 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 404

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G +  A ++   M   G + D  TYN ++N LC+     +A  LF+ +  RG+ P+ 
Sbjct: 405 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 464

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF +LI+G CK G  + A    + M      PD  TY++ I+  CK+   ++      +
Sbjct: 465 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 524

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+ ++Y I+I+      +     R W EMV  G  P +V+  T ++ YC  G 
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 584

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A+  L +M   GV  D+++YNTL++G       D A +++ +M +   VP+  TY +
Sbjct: 585 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 644

Query: 421 ILTGFCRQGRMHD----SELILWRMIE-------------KGLNPDRSTYTTLINGHVSQ 463
           +L    R   + D    +   +W+ IE                 P+  TY++++ G    
Sbjct: 645 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 704

Query: 464 NNLKEA 469
              +EA
Sbjct: 705 GRTEEA 710



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 249/511 (48%), Gaps = 35/511 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C++ K   A+  L EM +KG+ P  VT   +INAYC+EG + +A +++  M  +G
Sbjct: 295 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 354

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V+TYN+L+ G C +G+  +A  +L++M   G++PD  TYN L+   C   ++  A 
Sbjct: 355 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 414

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+  D  +++ LI    ++G+ D+A   F  +++ G+ P+ V +  +ING 
Sbjct: 415 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 474

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G    A K  ++M+  GC  D  TY++ +  LC+ K   E      EML++ V P  
Sbjct: 475 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 534

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +IH   K+ N       +  M      PD+VTY T +  +C  G + +A  +  +
Sbjct: 535 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 594

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR--- 357
           M    ++ + ++Y  L++G+ S+G    A  +  +M      P   +   +++   R   
Sbjct: 595 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRL 654

Query: 358 ---------SG--------------DASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
                    +G              D  K +EFL         P+S +Y++++ GF  + 
Sbjct: 655 VEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL---------PNSGTYSSILEGFSEDG 705

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
             ++A +LVS M+   +  +   Y  ++T FC+  R  D+ +++  MI+ G  P   +Y 
Sbjct: 706 RTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQ 765

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            L++G + +    +A         + + PD+
Sbjct: 766 HLLSGLICEGQTDKAKEIFMNSRWKDYSPDE 796



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 207/438 (47%), Gaps = 17/438 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C D  I+SA   L  ME  G+  D  TYN LINA C++G  ++A  L +S+  +G
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   T+NSLINGLCK G+ D A + L++M+  G +PDT TY++ +   C+ +   E  
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM ++ V P  V+++ +I    +          + EM S+G  PD V YT  +  Y
Sbjct: 520 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 579

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA  +  EM + G  +D + YNT+++G         A  +  +M      P+ 
Sbjct: 580 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 639

Query: 241 YTFTTLIH-----------------GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           +T+  L+                  G  K   +     LFD+M +    P+  TY+++++
Sbjct: 640 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 699

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           GF + G  E+A  L + M    IS N   Y  L+  +C      +A+ L   M+  G  P
Sbjct: 700 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 759

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            L+S   ++ G    G   KA E       +   PD I +  +I+G +++ + D +  ++
Sbjct: 760 QLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 819

Query: 404 SKMENQGLVPDVITYNVI 421
             +E     P   TY ++
Sbjct: 820 IMLERMNCRPSHQTYAML 837



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM   G  PD VTY T + AYC EG L EA  ++  MS  G+      YN+L++G    G
Sbjct: 559 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 618

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-----------------NMSEAEEI 122
           + D A  +L +M  +   P+  TY  LL    R                    +++   +
Sbjct: 619 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGL 678

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           F  M +    P+  ++S+++  FS +G+ + A      MK   +  +  +YT ++  +C+
Sbjct: 679 FDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCK 738

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           +   L+A  +   M++ G +  +++Y  +L+GL       +A ++F     +   PD   
Sbjct: 739 SKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV 798

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           +  +I G  K G+ + +  +  ++ + + +P   TY  L +
Sbjct: 799 WKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 839



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   CK  +   A + +C M Q G  P  ++Y  L++    EG  ++A ++  +   K 
Sbjct: 732 LVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKD 791

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
             P    +  +I+GL KKG  D ++E++  + +M   P   TY  L  E   +E
Sbjct: 792 YSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDRE 845


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 262/521 (50%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCK  ++  A+    +ME +   P    YNT+I  Y   G  E+A++L+  +  +G
Sbjct: 24  MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 83

Query: 61  LKPGVF----------------------------------TYNSLINGLCKKGRCDRAKE 86
             P V                                   TYN +I+ LC  GR + A  
Sbjct: 84  CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYR 143

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           +LDEM    L P+  T N ++   C+   + EA +IF   S+RG  PD V++ +LI    
Sbjct: 144 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 203

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + GQ+D A   F +M  AG   + V+YT +I  +  +G   +  K+  E++ +GC  D+ 
Sbjct: 204 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLT 263

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
             NT ++ + +A  + +   +F ++   G  PD  +++ LIHG  K G   +  N+F  M
Sbjct: 264 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 323

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            Q+    D   YN ++DGFCK G++ KA ++  +M  + + P   +YG +++G   +  +
Sbjct: 324 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 383

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA+ L+ E   KGI+  +V  +++I G+ + G   +A   L +M+ +G+ P+  ++N+L
Sbjct: 384 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 443

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR-MIEKG 445
           ++  V+ E +++A      M+     P+  TY++++ G CR  + ++   + W+ M ++G
Sbjct: 444 LDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK-YNKAFVFWQDMQKQG 502

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L P+  TYTT+I+G     N+ +A+   +     G +PD A
Sbjct: 503 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 543



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 233/439 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   +++ A   L EME   ++P+ +T N +++  C+   LEEA+++  S S +G
Sbjct: 128 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 187

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY SLI+GL KKG+ D A  + ++ML  G + +   Y +L+          +  
Sbjct: 188 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 247

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF E+ RRG  PD+   +T +    + G++++  M F +++S G +PD   Y+I+I+G 
Sbjct: 248 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 307

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   E   +   M ++G  +D   YN +++G C++  + +A ++  EM E+ V P  
Sbjct: 308 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  ++ G  K   +++A  LF+    K I+ ++V Y++LIDGF KVG +++A  +  +
Sbjct: 368 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 427

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + ++PN  ++  L++       + EA   +  M      P   + + +I G CR   
Sbjct: 428 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 487

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F   M  +G+ P+ ++Y T+I+G  +  N+  A++L  + +  G +PD  ++N 
Sbjct: 488 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 547

Query: 421 ILTGFCRQGRMHDSELILW 439
           ++ G     R  ++    W
Sbjct: 548 LIEGMSNANRAMEAYQAGW 566



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 249/462 (53%), Gaps = 11/462 (2%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           A  F  E++ +G+ PD V+Y ++I   C+ G L EA +L   M  +   P  + YN++I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
           G    GR + A ++L+ + + G  P   ++N++L    +K  + EA  +F E+ ++   P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           +  +++ +I +    G+++ A     EM+ A L P+ +   I+++  C+   + EA K+ 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL-----IH 248
           +   ++GC  D VTY ++++GL +   + EA  LF +ML+ G   +   +T+L     IH
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G  +DG+      +F  + ++  KPD+   NT +D   K GE+EK   ++ D+ S    P
Sbjct: 241 GRKEDGH-----KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 295

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           +  SY ILI+G    G   E   +++ M  +G      + N ++ G+C+SG   KA E L
Sbjct: 296 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 355

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M  + V P   +Y  +++G  + + +D+A+ L  + +++G+  +V+ Y+ ++ GF + 
Sbjct: 356 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 415

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           GR+ ++ LIL  M++KGL P+  T+ +L++  V    + EA 
Sbjct: 416 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 457



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 194/397 (48%), Gaps = 36/397 (9%)

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A + F E+  +G+ PD VS++++I +  + G+L  A   F +M++   VP    Y  +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G   +A K+ + + E+GC+  VV++N+IL  L + + + EA  LF E++++   P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  T+  +I   C  G + +A  + D M   S+ P+++T N ++D  CK  ++E+A K++
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRL-------------------------- 332
                R  +P+ ++Y  LI+G    G V EA+RL                          
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 333 ---------WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
                    + E++ +G KP L   NT +    ++G+  K       + S G  PD  SY
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + LI+G  +     +   +   M+ QG   D   YN ++ GFC+ G++H +  IL  M E
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           K + P  +TY  +++G    + L EA+   +E   +G
Sbjct: 361 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 397


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 257/483 (53%), Gaps = 1/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  +I  A+   C + Q  + P+ +TY+ LI++ C+ G +  A   ++ M  K 
Sbjct: 86  LIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKD 145

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY+SLING  K+G    A +VL +M+     P+  TY  LL  S +      A 
Sbjct: 146 CVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIAL 205

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M + G+  ++      +    R+G+++ A     +M S GL PD V YT +++G+
Sbjct: 206 DLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGF 265

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G V  AL +  EM  K  V D+VT+N ++N L +    ++ + +++ M E G+ PD 
Sbjct: 266 LKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDL 324

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+++G+ K GN   AL L++ M  + + P+ +T N +I+G C+ G ME A  +  +
Sbjct: 325 ATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKE 384

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P   +Y IL+N            +    +V   +K      N +I   C+ G 
Sbjct: 385 MVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGM 444

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L  M   G+  D+ +YN LI+G+    ++ +AF   S M ++ + PD+ TYN+
Sbjct: 445 TRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNL 504

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G  + G +H+++ +L  + ++GL P+  TY TL+ GH    N KE  R + EM+ +G
Sbjct: 505 LLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKG 564

Query: 481 FVP 483
           F+P
Sbjct: 565 FIP 567



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 262/529 (49%), Gaps = 46/529 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++ CK   I+ A+  L EME+K   P+ +TY++LIN Y ++G L +AF+++  M  K 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY  L++G  K G  D A ++  +M Q GL  +    +  +    R   M EAE
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---------------- 164
           E+  +M+  G+ PD+V+++ L+  F ++G++  AL   +EM S                 
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 300

Query: 165 ------------------GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
                             GL PD   Y  ++NG  + G    AL++ +EM  +  + + +
Sbjct: 301 FKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAI 360

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T N ++NGLC A  +  A D+  EM+  G++P   T+  L++   K    +  L   +++
Sbjct: 361 TCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELL 420

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               +K D   YN LI   CK+G   KA  +  DM  R I  +  +Y  LI+GYC   H+
Sbjct: 421 VNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHL 480

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             AF  +  M+ + + P + + N ++ G  ++G   +AD+ LS++   G+ P++ +Y TL
Sbjct: 481 KRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETL 540

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           + G  +  N  +   +  +M  +G +P    YN+++  F + G+M  ++ ++  M  KG+
Sbjct: 541 MCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGV 600

Query: 447 NPDRSTYTTLINGHVS-------QNNLK-----EAFRFHDEMLQRGFVP 483
           +P  +TY  LI G  +        + LK     EA R   EM  RGFVP
Sbjct: 601 SPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVP 649



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 245/481 (50%), Gaps = 1/481 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            LCK  K+   K+ L EM + G+  + V+Y  L++A  + G + EA   +  M  +G   
Sbjct: 19  GLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNF 78

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V     LI+GL K G+   A+ +   + Q+ L P+  TY+ L+   C+  +++ AE   
Sbjct: 79  DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESAL 138

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM  +   P+++++S+LI  + + G L  A    R+M     +P+   Y I+++G  + 
Sbjct: 139 HEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKA 198

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G+   AL +  +M + G   +V   +  +N + R+  + EA++L  +M   G+ PD   +
Sbjct: 199 GWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNY 258

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           T L+ G  K G ++ ALNL   MT K++  DIVT+N LI+   K+G+ +    +++ M  
Sbjct: 259 TNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSD-TESIYSAMRE 317

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             +SP+  +Y  ++NG    G+ T A  LW EM  + + P  ++CN +I G C +G    
Sbjct: 318 MGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMEN 377

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A + L +MV  G+ P S +Y  L+N   +    D        + N  L  D   YN++++
Sbjct: 378 AIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILIS 437

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             C+ G    +  +L  M E+G+  D +TY  LI+G+   ++LK AF  +  ML     P
Sbjct: 438 NLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSP 497

Query: 484 D 484
           D
Sbjct: 498 D 498



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 232/449 (51%), Gaps = 13/449 (2%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           VN + +  +++ A+  + +M   G+ PD V Y  L++ + + G +  A  L   M+ K +
Sbjct: 227 VNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNV 286

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
              + T+N LIN L K G+ D  + +   M +MGLSPD ATYNT+L  + +K N + A E
Sbjct: 287 VFDIVTFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALE 345

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           ++ EM  R + P+ ++ + +I      G+++ A+   +EM   GL P +  Y I++N   
Sbjct: 346 LWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISS 405

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++      L+  + ++     +D   YN +++ LC+  M  +A  +  +M ERG+  D  
Sbjct: 406 KSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTT 465

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  LIHG+C   ++ +A   +  M  + + PDI TYN L+ G  K G + +A+ L +++
Sbjct: 466 TYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEI 525

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R + PN  +Y  L+ G+C + +  E  R++ EMV KG  P   + N +I  + + G  
Sbjct: 526 KKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKM 585

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD------------KAFALVSKMENQ 409
            +A E +++M ++GV P   +Y+ LI G+     M             +A  L  +M ++
Sbjct: 586 KQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDR 645

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELIL 438
           G VP   T   I + F   G+  D+ ++L
Sbjct: 646 GFVPCESTQACISSTFAAPGKKADARMLL 674



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 217/403 (53%), Gaps = 1/403 (0%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M G G+ P V T+ S++ GLCK G+    K +L EM +MG++ +  +Y  LL    +   
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           ++EA      M  RG   D+++ + LI    ++GQ+  A   F  +    LVP+ + Y+ 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I+  C+ G +  A     EM EK CV +V+TY++++NG  +  +L +A  +  +M+ + 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  T+  L+ G  K G  + AL+L+  M Q  +K ++   +  ++   + G ME+A 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           +L A M S  + P+ ++Y  L++G+   G V+ A  L  EM  K +   +V+ N +I   
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 300

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            + G  S  +   S M   G+ PD  +YNT++NG  ++ N   A  L ++M+++ L+P+ 
Sbjct: 301 FKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNA 359

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           IT N+++ G C  GRM ++  IL  M+  GL P  +TY  L+N
Sbjct: 360 ITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLN 402



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 200/359 (55%), Gaps = 1/359 (0%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M   G+ PD+V+F +++    ++G+L    +  REM   G+  +NV YTI+++   + G 
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V EAL     M+ +G   DV+    +++GL ++  + EA+ LF  + +  + P++ T++ 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI   CK G++N A +    M +K   P+++TY++LI+G+ K G +  A K+   M+ + 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             PN  +Y IL++G    G    A  L+ +M   G+K  +   +  +    RSG   +A+
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E ++KM S G+ PD ++Y  L++GF++   +  A  L  +M ++ +V D++T+NV++   
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 300

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            + G+  D+E I   M E GL+PD +TY T++NG+  + N   A    +EM  R  +P+
Sbjct: 301 FKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPN 358


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 262/521 (50%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCK  ++  A+    +ME +   P    YNT+I  Y   G  E+A++L+  +  +G
Sbjct: 290 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 349

Query: 61  LKPGVF----------------------------------TYNSLINGLCKKGRCDRAKE 86
             P V                                   TYN +I+ LC  GR + A  
Sbjct: 350 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYR 409

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           +LDEM    L P+  T N ++   C+   + EA +IF   S+RG  PD V++ +LI    
Sbjct: 410 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 469

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + GQ+D A   F +M  AG   + V+YT +I  +  +G   +  K+  E++ +GC  D+ 
Sbjct: 470 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLT 529

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
             NT ++ + +A  + +   +F ++   G  PD  +++ LIHG  K G   +  N+F  M
Sbjct: 530 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 589

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            Q+    D   YN ++DGFCK G++ KA ++  +M  + + P   +YG +++G   +  +
Sbjct: 590 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 649

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA+ L+ E   KGI+  +V  +++I G+ + G   +A   L +M+ +G+ P+  ++N+L
Sbjct: 650 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 709

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR-MIEKG 445
           ++  V+ E +++A      M+     P+  TY++++ G CR  + ++   + W+ M ++G
Sbjct: 710 LDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK-YNKAFVFWQDMQKQG 768

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L P+  TYTT+I+G     N+ +A+   +     G +PD A
Sbjct: 769 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 809



 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 255/540 (47%), Gaps = 71/540 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL +  + + A   L +M++ G       + TL+ A  REG + +A  L++ + G  
Sbjct: 185 LIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSC 244

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P +  YN  I+   K G  D A +   E+   GL PD  +Y +++   C+   + EAE
Sbjct: 245 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAE 304

Query: 121 EIFCEMS-----------------------------------RRGVAPDIVSFSTLIGIF 145
           E+F +M                                     RG  P +VSF++++   
Sbjct: 305 ELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCL 364

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  ++D AL  F  MK     P++  Y III+  C  G V EA ++ DEM       ++
Sbjct: 365 GKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNL 423

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +T N +++ LC+A+ L EA  +F    +RG  PD  T+ +LI G  K G +++A  LF+ 
Sbjct: 424 LTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK 483

Query: 266 M-----------------------------------TQKSIKPDIVTYNTLIDGFCKVGE 290
           M                                    ++  KPD+   NT +D   K GE
Sbjct: 484 MLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGE 543

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           +EK   ++ D+ S    P+  SY ILI+G    G   E   +++ M  +G      + N 
Sbjct: 544 VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNA 603

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++ G+C+SG   KA E L +M  + V P   +Y  +++G  + + +D+A+ L  + +++G
Sbjct: 604 VVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 663

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           +  +V+ Y+ ++ GF + GR+ ++ LIL  M++KGL P+  T+ +L++  V    + EA 
Sbjct: 664 IELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 723



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 245/516 (47%), Gaps = 36/516 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +  AL +  ++D A + +  M +    P    Y  LI A       E A +L+  M   G
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            + GV  + +L+  L ++G+   A  ++DE+    L PD   YN  +    +  N+  A 
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F E+  +G+ PD VS++++I +  + G+L  A   F +M++   VP    Y  +I GY
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G   +A K+ + + E+GC+  VV++N+IL  L + + + EA  LF E++++   P+ 
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNS 388

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I   C  G + +A  + D M   S+ P+++T N ++D  CK  ++E+A K++  
Sbjct: 389 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 448

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRL---------------------------- 332
              R  +P+ ++Y  LI+G    G V EA+RL                            
Sbjct: 449 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 508

Query: 333 -------WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
                  + E++ +G KP L   NT +    ++G+  K       + S G  PD  SY+ 
Sbjct: 509 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 568

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  +     +   +   M+ QG   D   YN ++ GFC+ G++H +  IL  M EK 
Sbjct: 569 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 628

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + P  +TY  +++G    + L EA+   +E   +G 
Sbjct: 629 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGI 664



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 220/469 (46%), Gaps = 70/469 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   +++ A   L EME   ++P+ +T N +++  C+   LEEA+++  S S +G
Sbjct: 394 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 453

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY SLI+GL KKG+ D A  + ++ML  G + +   Y +L+          +  
Sbjct: 454 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 513

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII--- 177
           +IF E+ RRG  PD+   +T +    + G++++  M F +++S G +PD   Y+I+I   
Sbjct: 514 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 573

Query: 178 --------------------------------NGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                                           +G+C++G V +A ++ +EM EK     V
Sbjct: 574 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 633

Query: 206 VTYNTILNGLCRAKMLTEADDLFNE----------------------------------- 230
            TY  I++GL +   L EA  LF E                                   
Sbjct: 634 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 693

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           M+++G+ P+ YT+ +L+    K   +N+AL  F  M +    P+  TY+ LI+G C+V +
Sbjct: 694 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 753

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
             KA   W DM  + + PN ++Y  +I+G   +G++T+A+ L+      G  P   S N 
Sbjct: 754 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 813

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           +I+G   +  A +A +   +    G   +  S  +L++   + E +++A
Sbjct: 814 LIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 47/108 (43%)

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P   +Y  LI         ++A  L+ +M+  G    V  +  ++    R+G++ D+  +
Sbjct: 177 PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 236

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +  +    L PD   Y   I+      N+  A++F  E+  +G  PDD
Sbjct: 237 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDD 284


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 136/419 (32%), Positives = 234/419 (55%), Gaps = 1/419 (0%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y  +IN   +    + +    +EM+  G  P +  +N LL       + ++    F E +
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           +  V  D+ SF  LI      G+++++     E+   G  P+ V+YT +I+G C+ G + 
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           +A  +  EM + G V +  TY  ++NGL +  +  +  +++ +M E GVFP+ YT+  ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +  CKDG    A  +FD M ++ +  +IVTYNTLI G C+  ++ +ANK+   M S  I+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN I+Y  LI+G+C +G + +A  L  ++  +G+ P+LV+ N ++ G+CR GD S A + 
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           + +M   G+ P  ++Y  LI+ F R +NM+KA  L   ME  GLVPDV TY+V++ GFC 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +G+M+++  +   M+EK   P+   Y T+I G+  + +   A +   EM ++   P+ A
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 253/466 (54%), Gaps = 5/466 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+  +   ++ +  +  EM   G  P +  +N L+          + +   N    K 
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK- 158

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V+++  LI G C+ G  +++ ++L E+ + G SP+   Y TL+   C+K  + +A+
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM + G+  +  +++ LI    +NG   +    + +M+  G+ P+   Y  ++N  
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G   +A ++ DEM E+G   ++VTYNT++ GLCR   L EA+ + ++M   G+ P+ 
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G C  G + KAL+L   +  + + P +VTYN L+ GFC+ G+   A K+  +
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P+ ++Y ILI+ +    ++ +A +L   M   G+ P + + + +I G+C  G 
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A      MV +  +P+ + YNT+I G+ +E +  +A  L+ +ME + L P+V +Y  
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI----NGHVS 462
           ++   C++ +  ++E ++ +MI+ G++P  S  + +     + HVS
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHVS 564



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 246/454 (54%), Gaps = 1/454 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           Y  +IN+Y +   L  +    N M   G  PG   +N L+  +      ++     +E  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           +  +  D  ++  L+   C    + ++ ++  E++  G +P++V ++TLI    + G+++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           +A   F EM   GLV +   YT++ING  +NG   +  +M ++M E G   ++ TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           N LC+     +A  +F+EM ERGV  +  T+ TLI G C++  +N+A  + D M    I 
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+++TYNTLIDGFC VG++ KA  L  D+ SR +SP+ ++Y IL++G+C  G  + A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             EM  +GIKP+ V+   +I  + RS +  KA +    M   G+ PD  +Y+ LI+GF  
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +  M++A  L   M  +   P+ + YN ++ G+C++G  + +  +L  M EK L P+ ++
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           Y  +I     +   KEA R  ++M+  G  P  +
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 184/348 (52%), Gaps = 36/348 (10%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           LY +IIN Y ++  +  ++   +EM++ G V     +N +L  +  +    +    FNE 
Sbjct: 96  LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
             + V  D Y+F  LI G C+ G + K+ +L   +T+    P++V Y TLIDG CK GE+
Sbjct: 156 KSKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 292 EKANKLWADMISRKISPNYISYGILING-------------------------------- 319
           EKA  L+ +M    +  N  +Y +LING                                
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 320 ---YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
               C  G   +AF+++ EM  +G+   +V+ NT+I G CR    ++A++ + +M S+G+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
           +P+ I+YNTLI+GF     + KA +L   ++++GL P ++TYN++++GFCR+G    +  
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  M E+G+ P + TYT LI+     +N+++A +    M + G VPD
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 19/284 (6%)

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM-----TQKSIKPD 274
           + + A  L  +++   +   F+T ++L+H   +         L++++       +S+   
Sbjct: 54  LFSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLS 113

Query: 275 IVTYNTLID-GFCK-----------VGEMEKANKLWA--DMISRKISPNYISYGILINGY 320
           I  +N ++D GF             V      N+ W+  +    K+  +  S+GILI G 
Sbjct: 114 ISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGC 173

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + ++F L  E+   G  P +V   T+I G C+ G+  KA +   +M   G+  + 
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +Y  LING  +     + F +  KM+  G+ P++ TYN ++   C+ GR  D+  +   
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M E+G++ +  TY TLI G   +  L EA +  D+M   G  P+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/438 (31%), Positives = 247/438 (56%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            ME+KG + D  +    + A  R G ++   +    M    ++  V++   +++GLCK+G
Sbjct: 180 HMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRG 239

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             +  ++++DE+   G+  +  TYN  +    ++ ++    EI   M + GVA ++V+++
Sbjct: 240 DVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYT 299

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI  FS  G+++ A   F EM+  G+  D  +YT II+  CR+G V  AL + DEM +K
Sbjct: 300 LLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK 359

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G +    TY  +++G+C+A  +  A  L NEM  +G+  +   F TLI G+C+ G +++A
Sbjct: 360 GLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEA 419

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L L  +M +K ++ D+  YN++  G CK+   ++A  L   M+ R +SPN +S+  LI+ 
Sbjct: 420 LRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDI 479

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           YC  G+  EA R++ EM  KG  P +++ N +I GY + G+  +A +   ++ + G+ PD
Sbjct: 480 YCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPD 539

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             +  +LI+G   +  +D A  L  +M  +GLVP+V+TY  +++G  + GR  ++  +  
Sbjct: 540 VYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYD 599

Query: 440 RMIEKGLNPDRSTYTTLI 457
            M E GL PD + Y++L+
Sbjct: 600 EMKETGLTPDDTVYSSLV 617



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/395 (33%), Positives = 221/395 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   ++  +  + E+  KGV  + VTYN  I  Y +   L    +++  M  +G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V TY  LI+G    G+ + A+ + +EM + G+  D   Y +++  +CR  N+  A 
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ +G+ P   ++  LI    + GQ++ A M   EM+  G+  + V++  +I+GY
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G V EAL+++  M +KG   DV  YN+I +GLC+     EA  L   M+ERGV P+ 
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +FTTLI  +CK+GN  +A  +F  M +K   P+I+TYN LIDG+ K G M++A+KL  +
Sbjct: 471 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 530

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +R + P+  +   LI+G C  G V  A +L+ EM  +G+ P +V+   +I G  + G 
Sbjct: 531 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 590

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           + +A +   +M   G+ PD   Y++L+      E+
Sbjct: 591 SEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAES 625



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 150/460 (32%), Positives = 228/460 (49%), Gaps = 47/460 (10%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL+  V    SL++  C + +C+RAK    E            ++ L       +   EA
Sbjct: 127 GLRVPVTVIASLVDDACNESKCNRAK--FKEKF----------FDLLFRVYADNKMFGEA 174

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E F  M ++G   D  S    +    R GQ+D  L +FR M +  +       TI+++G
Sbjct: 175 LEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDG 234

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR-------AKMLT---------- 222
            C+ G V    K+ DE+  KG   +VVTYN  + G  +       A++LT          
Sbjct: 235 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACN 294

Query: 223 ------------------EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
                             EA  LF EM E+G+  D Y +T++I  +C+ GN+ +AL LFD
Sbjct: 295 VVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFD 354

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            MT K + P   TY  LI G CK G+ME A  L  +M  + I  N + +  LI+GYC  G
Sbjct: 355 EMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESG 414

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EA RL   M  KG++  + + N+I  G C+     +A   L  MV  GV P+++S+ 
Sbjct: 415 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 474

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI+ + +E N  +A  +  +ME +G VP++ITYNV++ G+ ++G M ++  +   +  +
Sbjct: 475 TLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 534

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL PD  T T+LI+G      +  A +  DEM QRG VP+
Sbjct: 535 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 574


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 247/437 (56%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           ME+KG + D  +    + A  R G ++   +    M    ++  V++   +++GLCK+G 
Sbjct: 185 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 244

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            +  ++++DE+   G+  +  TYN  +    ++ ++    EI   M + GVA ++V+++ 
Sbjct: 245 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTL 304

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI  FS  G+++ A   F EM+  G+  D  +YT II+  CR+G V  AL + DEM +KG
Sbjct: 305 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 364

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            +    TY  +++G+C+A  +  A  L NEM  +G+  +   F TLI G+C+ G +++AL
Sbjct: 365 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEAL 424

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L  +M +K ++ D+  YN++  G CK+   ++A  L   M+ R +SPN +S+  LI+ Y
Sbjct: 425 RLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIY 484

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G+  EA R++ EM  KG  P +++ N +I GY + G+  +A +   ++ + G+ PD 
Sbjct: 485 CKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDV 544

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +  +LI+G   +  +D A  L  +M  +GLVP+V+TY  +++G  + GR  ++  +   
Sbjct: 545 YTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDE 604

Query: 441 MIEKGLNPDRSTYTTLI 457
           M E GL PD + Y++L+
Sbjct: 605 MKETGLTPDDTVYSSLV 621



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/387 (33%), Positives = 219/387 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   ++  +  + E+  KGV  + VTYN  I  Y +   L    +++  M  +G
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V TY  LI+G    G+ + A+ + +EM + G+  D   Y +++  +CR  N+  A 
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ +G+ P   ++  LI    + GQ++ A M   EM+  G+  + V++  +I+GY
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G V EAL+++  M +KG   DV  YN+I +GLC+     EA  L   M+ERGV P+ 
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +FTTLI  +CK+GN  +A  +F  M +K   P+I+TYN LIDG+ K G M++A+KL  +
Sbjct: 475 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 534

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +R + P+  +   LI+G C  G V  A +L+ EM  +G+ P +V+   +I G  + G 
Sbjct: 535 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 594

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLI 387
           + +A +   +M   G+ PD   Y++L+
Sbjct: 595 SEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  237 bits (605), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 150/460 (32%), Positives = 228/460 (49%), Gaps = 47/460 (10%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL+  V    SL++  C + +C+RAK    E            ++ L       +   EA
Sbjct: 131 GLRVPVTVIASLVDDACNESKCNRAK--FKEKF----------FDLLFRVYADNKMFGEA 178

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E F  M ++G   D  S    +    R GQ+D  L +FR M +  +       TI+++G
Sbjct: 179 LEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDG 238

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR-------AKMLT---------- 222
            C+ G V    K+ DE+  KG   +VVTYN  + G  +       A++LT          
Sbjct: 239 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACN 298

Query: 223 ------------------EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
                             EA  LF EM E+G+  D Y +T++I  +C+ GN+ +AL LFD
Sbjct: 299 VVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFD 358

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            MT K + P   TY  LI G CK G+ME A  L  +M  + I  N + +  LI+GYC  G
Sbjct: 359 EMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESG 418

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EA RL   M  KG++  + + N+I  G C+     +A   L  MV  GV P+++S+ 
Sbjct: 419 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 478

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI+ + +E N  +A  +  +ME +G VP++ITYNV++ G+ ++G M ++  +   +  +
Sbjct: 479 TLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 538

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL PD  T T+LI+G      +  A +  DEM QRG VP+
Sbjct: 539 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 578



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 137/253 (54%), Gaps = 35/253 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ +CK  ++++A+M + EM+ KG+  + V +NTLI+ YC  G ++EA +L   M  KG
Sbjct: 375 LIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKG 434

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  VF YNS+ +GLCK  R D AK +L  M++ G+SP+T ++ TL+   C++ N  EA+
Sbjct: 435 LESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAK 494

Query: 121 EIFCEMSR-----------------------------------RGVAPDIVSFSTLIGIF 145
            +F EM                                     RG+ PD+ + ++LI   
Sbjct: 495 RVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGE 554

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
             +G++D AL  F EM   GLVP+ V YT +I+G  ++G   EA K+ DEM E G   D 
Sbjct: 555 CIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDD 614

Query: 206 VTYNTILNGLCRA 218
             Y++++  L  A
Sbjct: 615 TVYSSLVGSLHSA 627


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 146/477 (30%), Positives = 245/477 (51%), Gaps = 2/477 (0%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
            + + A   L  M  +G  PD +TY++ I A  +    +EA  L+ SM G+G+KP V  Y
Sbjct: 200 RQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVY 259

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           ++ I+   K G+ + A ++L EM  +GL+PD  TY+T++    ++     A  +  EM  
Sbjct: 260 SAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPT 319

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           +GV  +I+++S +IG  ++ GQ + A+   REM+  G+ PD + Y+  I+   + G   E
Sbjct: 320 KGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEE 379

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A+ +  EM  +G   + ++Y  +++   +     EA DL  EM   GV PD   ++  I 
Sbjct: 380 AVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAID 439

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
              +     +AL L   M    + P++++YN+ ID   K G  + A +L  +M +  ++P
Sbjct: 440 ACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAP 499

Query: 309 NYISYGILINGYCSMG-HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           + I+Y  +I   C+MG    EA  L+ EM  +GI P +VSCNT I    + G   +A + 
Sbjct: 500 DVITYSAVI-ASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDV 558

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           L +M + G+ PD+ISY T I+   + +   +   L+ +M   GL PD I+Y   ++    
Sbjct: 559 LGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSV 618

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G   ++ ++L  M+  GL+PD  TY + IN        KEA     +M   G  PD
Sbjct: 619 DGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPD 675



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 208/441 (47%)

Query: 44  GFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY 103
           G   +A  +++ M  +G+KP    Y+S I       + +RA E+L  M   G  PD  TY
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           ++ +    +     EA  +   M  +GV P+++ +S  I    + GQ + A+   +EM +
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
            GL PD + Y+ +I+   + G    A ++  EM  KG V +++TY+ ++    +     E
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A  L  EM E GV PD  T+++ I    K G   +A+ L   M  + + P+ ++Y  +I 
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
              K G   +A  L  +M +  + P+ I+Y   I+         +A  L  EM   G+ P
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP 464

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            ++S N+ I    ++G +  A E L +M + G+ PD I+Y+ +I         ++A  L 
Sbjct: 465 NVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLF 524

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            +M+ QG+ PDV++ N  +    + G   ++  +L  M   GL PD  +Y T I+     
Sbjct: 525 REMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKG 584

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
           +  KE      EM   G  PD
Sbjct: 585 DRWKEIIDLLREMSTVGLTPD 605



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 212/433 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K  + + A   L EM  KGV  + +TY+ +I A  + G  EEA  L+  M   G
Sbjct: 297 VIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENG 356

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY+S I+   KKG+ + A  +L EM   G++P+  +Y  ++    ++    EA 
Sbjct: 357 VAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAI 416

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   GV PD++++S  I   ++  + ++AL   REM + GL P+ + Y   I+  
Sbjct: 417 DLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDAC 476

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A+++  EM   G   DV+TY+ ++      +   EA DLF EM  +G+ PD 
Sbjct: 477 AKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDV 536

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +  T I+   + G   +AL++   M    + PD ++Y T ID   K    ++   L  +
Sbjct: 537 VSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLRE 596

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +  ++P+ ISY   ++     G   EA  L  +M+  G+ P +V+ N+ I    + G 
Sbjct: 597 MSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGR 656

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L +M + G+ PD  S+N  I+     +    A  ++ +M   G+ P+  TY  
Sbjct: 657 WKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLT 716

Query: 421 ILTGFCRQGRMHD 433
            +    R G   D
Sbjct: 717 AMYACKRCGEKDD 729


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 263/535 (49%), Gaps = 56/535 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L +  KID A      +++ G+ P+  TY   I A CR+G  EEA  +   M   G
Sbjct: 198 LMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAG 257

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T ++ I GLC   R D   E L  +       DT  Y  ++   C +  + EAE
Sbjct: 258 VNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAE 317

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY----------------------- 157
           ++F +M   G+APD   +  LI  + + G L +A+                         
Sbjct: 318 DVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCL 377

Query: 158 ------------FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                       F+E + +G+  D VLY I+++  C+ G V EA+++ +EM  +   +DV
Sbjct: 378 CEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDV 437

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V Y T++ G C    L +A ++F EM ERG+ PD  T+  L+ G  ++G   +AL L D 
Sbjct: 438 VHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDC 497

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +  + +KP+  T+N +I+G C  G++++A + + + +  K   NY +   +++GYC    
Sbjct: 498 IGTQGLKPNSATHNRIIEGLCMAGKVKEA-EAFLNTLEDKCLENYSA---MVDGYCKANF 553

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +A+ L+  +  +GI     SC  ++   C  G+  KA   L +M++  V+P+ I Y  
Sbjct: 554 TRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGK 613

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI  F R+ +M +A  +   +  +G+ PDVITY +++ G+CR   + ++  I   M E+G
Sbjct: 614 LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERG 673

Query: 446 LNPDRSTYTTLINGHVSQNNLK----------------EAFRFHDEMLQRGFVPD 484
           + PD  TYT +++GH S+ NLK                +A  F  EM + G  PD
Sbjct: 674 IKPDVITYTVVLDGH-SKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPD 727



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 248/500 (49%), Gaps = 21/500 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C + K+  A+    +M  +G+ PD   Y  LI+AYC+ G L +A  L N M   G
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K      +S++  LC+ G      +   E    G+  D   YN ++   C+   + EA 
Sbjct: 363 IKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAV 422

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  R ++ D+V ++TLI  +   G+L  A   F EMK  G+ PD V Y I++ G+
Sbjct: 423 ELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGF 482

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            RNG   EAL++ D +  +G   +  T+N I+ GLC A  + EA+   N + ++ +    
Sbjct: 483 SRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCL---- 538

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++ ++ G+CK     KA  LF  ++++ I     +   L+   C  GE +KA  L   
Sbjct: 539 ENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLER 598

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++  + PN I YG LI  +C  G +  A  ++  +V +GI P +++   +I GYCR   
Sbjct: 599 MLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNC 658

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVR----------------EENMDKAFALVS 404
             +A +  + M   G+ PD I+Y  +++G  +                EE MD A    S
Sbjct: 659 LREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMD-ASPFWS 717

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M+  G+ PDV+ Y V++   C+   + D+  +   MI +GL PD  TYT L++   S+ 
Sbjct: 718 EMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRG 777

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
           ++  A    +EM  +G  PD
Sbjct: 778 DMDRAITLVNEMSFKGIEPD 797



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 249/521 (47%), Gaps = 74/521 (14%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           + L+ AY R G  +EA   +     +G  P + + N L+N L + G+ D A  +   + +
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GI-------- 144
           +GL+P+  TY   +   CRK N  EA ++F EM   GV P+ V+ ST I G+        
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 145 --------------------------FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
                                     F    +L  A   F +M + G+ PD  +Y  +I+
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            YC+ G +L+A+ + ++M+  G   + V  ++IL  LC   M +E  D F E  + G+F 
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFL 400

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +  ++   CK G + +A+ L + M  + +  D+V Y TLI G+C  G++  A  ++
Sbjct: 401 DEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMF 460

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M  R I P+ ++Y IL+ G+   G   EA  L   +  +G+KP   + N II+G C +
Sbjct: 461 EEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMA 520

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV------ 412
           G   +A+ FL+ +  + ++    +Y+ +++G+ +     KA+ L S++  QG++      
Sbjct: 521 GKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSC 576

Query: 413 -----------------------------PDVITYNVILTGFCRQGRMHDSELILWRMIE 443
                                        P+ I Y  ++  FCR G M  ++L+   ++E
Sbjct: 577 FKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVE 636

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +G+ PD  TYT +ING+   N L+EA    ++M +RG  PD
Sbjct: 637 RGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPD 677



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 198/373 (53%), Gaps = 19/373 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  AK    EM+++G+ PD VTYN L+  + R G  +EA +L++ +  +G
Sbjct: 443 LIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQG 502

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP   T+N +I GLC  G+   A+  L+ +    L      Y+ ++   C+     +A 
Sbjct: 503 LKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAY 558

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  +S++G+     S   L+      G+ D+AL+    M +  + P+ ++Y  +I  +
Sbjct: 559 ELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAF 618

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G +  A  + D ++E+G   DV+TY  ++NG CR   L EA D+FN+M ERG+ PD 
Sbjct: 619 CRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDV 678

Query: 241 YTFTTLIHGHCK-DGNMNKALN--------------LFDIMTQKSIKPDIVTYNTLIDGF 285
            T+T ++ GH K +  M ++L                +  M +  IKPD+V Y  LID  
Sbjct: 679 ITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSH 738

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK   ++ A  L+ +MI+R + P+ ++Y  L++  CS G +  A  L  EM  KGI+P  
Sbjct: 739 CKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDS 798

Query: 346 VSCNTIIKGYCRS 358
            + + + +G  ++
Sbjct: 799 RAMSVLHRGILKA 811



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 210/474 (44%), Gaps = 46/474 (9%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           A  F  ++++ G   +  TY  LI   CR     +   L++ + G       F   +L +
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
            L         +E   E+     S      + L+    R     EA +   +  RRG  P
Sbjct: 140 VL---------REGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVP 190

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
            I+S + L+     +G++D A+  +R +K  GL P++                       
Sbjct: 191 HIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDY---------------------- 228

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
                        TY   +  LCR     EA D+F EM E GV P+  T +T I G C  
Sbjct: 229 -------------TYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSH 275

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
              +        +   +   D   Y  +I GFC   ++++A  ++ DM++  I+P+   Y
Sbjct: 276 KRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIY 335

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
           G LI+ YC  G++ +A  L  +MV  GIK   V  ++I++  C  G AS+  +   +   
Sbjct: 336 GALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRD 395

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+  D + YN +++   +   +++A  L+++M+ + +  DV+ Y  ++ G+C QG++ D
Sbjct: 396 SGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVD 455

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNL-KEAFRFHDEMLQRGFVPDDA 486
           ++ +   M E+G+ PD  TY  L+ G  S+N L KEA    D +  +G  P+ A
Sbjct: 456 AKNMFEEMKERGIEPDIVTYNILVGG-FSRNGLKKEALELLDCIGTQGLKPNSA 508



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 160/307 (52%), Gaps = 19/307 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   K+  A+ FL  +E K +      Y+ +++ YC+  F  +A++L + +S +G
Sbjct: 513 IIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQG 568

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     +   L++ LC +G  D+A  +L+ ML + + P+   Y  L+   CR  +M  A+
Sbjct: 569 ILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQ 628

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  +  RG+ PD+++++ +I  + R   L  A   F +MK  G+ PD + YT++++G+
Sbjct: 629 LVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGH 688

Query: 181 CRNGFVL---------------EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
            +    +               +A     EM E G   DVV Y  +++  C+   L +A 
Sbjct: 689 SKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAI 748

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +L++EM+ RG+ PD  T+T L+   C  G+M++A+ L + M+ K I+PD    + L  G 
Sbjct: 749 NLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGI 808

Query: 286 CKVGEME 292
            K  +++
Sbjct: 809 LKARKVQ 815


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/477 (31%), Positives = 252/477 (52%), Gaps = 38/477 (7%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K  ++ +F   +E KG    +  ++ L++ Y   G++ +A Q         LK     +N
Sbjct: 142 KGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLK---IPFN 198

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
                 CK   C     +L+ M++M  SP  A                   E + E+   
Sbjct: 199 G-----CK---C-----LLERMIKMS-SPMVAL------------------EFYLEILDS 226

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  P++ +F+ L+    + G++  A + F E++  GL P  V +  +INGYC++G + E 
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            +++  M E     DV TY+ +++GLC+   L +A+ LF EM +RG+ P+  TFTTLI+G
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK+G ++ AL ++  M  K +K D+V YNTLIDG CK G   +A K   +M  R + P+
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y  L++G C  G +  A  +  EMV +GI+   V+   II G CR G    A+  L 
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR 466

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M+  G+ PD  +Y  +++GF ++ ++   F L+ +M++ G +P VITYNV++ G C+QG
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQG 526

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           ++ +++++L  M+  G+ PD  TY  L+ GH     L +   F +   + G V D A
Sbjct: 527 QVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGD---FQNVKTEMGLVSDYA 580



 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 119/336 (35%), Positives = 195/336 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ K+  A++   E+ + G+ P  V++NTLIN YC+ G LEE F+L   M    
Sbjct: 238 LMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFR 297

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY++LI+GLCK+ + + A  +  EM   GL P+  T+ TL+   C+   +  A 
Sbjct: 298 VFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLAL 357

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI+ +M  +G+  D+V ++TLI    + G    A  +  EM   GL+PD   YT +++G 
Sbjct: 358 EIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGS 417

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  AL+MR EM+++G  +D V +  I++GLCR   + +A+    EML  G+ PD 
Sbjct: 418 CKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDD 477

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T ++ G CK G++     L   M      P ++TYN L++G CK G+++ A+ L   
Sbjct: 478 GTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNA 537

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           M++  + P+ I+Y IL+ G+C  G + +   +  EM
Sbjct: 538 MLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM 573



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 200/380 (52%), Gaps = 35/380 (9%)

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV------------ 186
           S L  + SR G+   + ++   +++ G +  + ++  +++ Y   G+V            
Sbjct: 131 SLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKK 190

Query: 187 -----------------------LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
                                  + AL+   E+L+ G   +V T+N ++N LC+   + +
Sbjct: 191 HNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKD 250

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           A  +F+E+ + G+ P   +F TLI+G+CK GN+ +   L  +M +  + PD+ TY+ LID
Sbjct: 251 AQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALID 310

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           G CK  ++E AN L+ +M  R + PN +++  LING C  G V  A  ++ +M  KG+K 
Sbjct: 311 GLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKA 370

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            LV  NT+I G C+ G   +A +F+ +M   G+ PD  +Y TL++G  +E +++ A  + 
Sbjct: 371 DLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMR 430

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            +M  +G+  D + +  I++G CR G++ D+E  L  M+  GL PD  TYT +++G   +
Sbjct: 431 KEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKK 490

Query: 464 NNLKEAFRFHDEMLQRGFVP 483
            ++K  F+   EM   G +P
Sbjct: 491 GDVKMGFKLLKEMQSDGHIP 510



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 32/141 (22%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+D KI  A+  L EM + G+ PD  TY  +++ +C++G ++  F+L+  M   G
Sbjct: 448 IISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDG 507

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSP---------------------- 98
             PGV TYN L+NGLCK+G+   A  +L+ ML +G+ P                      
Sbjct: 508 HIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQ 567

Query: 99  ----------DTATYNTLLVE 109
                     D A+Y +LL E
Sbjct: 568 NVKTEMGLVSDYASYRSLLHE 588


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 256/483 (53%), Gaps = 1/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  +I  A+   C + Q  + P+ +TY+ LI+  C+ G +  A   ++ M  K 
Sbjct: 100 LIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKD 159

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY+SLING  K+G    A +VL +M+     P+  TY  LL  S +      A 
Sbjct: 160 CVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIAL 219

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M + G+  ++      +    R+G+++ A     +M S GL PD V YT +++G+
Sbjct: 220 DLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGF 279

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G V  AL +  EM  K  V D+VT+N ++N L +    ++ + +++ M E G+ PD 
Sbjct: 280 LKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDL 338

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+++G+ K GN   AL L++ M  + + P+ +T N +I+G C+ G ME A  +  +
Sbjct: 339 ATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKE 398

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P   +Y IL+N            +    +V   +K      N +I   C+ G 
Sbjct: 399 MVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGM 458

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA   L  M   G+  D+ +YN LI+G+    ++ +AF   S M ++ + PD+ TYN+
Sbjct: 459 TRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNL 518

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G  + G +H+++ +L  + ++GL P+  TY TL+ GH    N KE  R + EM+ +G
Sbjct: 519 LLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKG 578

Query: 481 FVP 483
           F+P
Sbjct: 579 FIP 581



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 261/529 (49%), Gaps = 46/529 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   I+ A+  L EME+K   P+ +TY++LIN Y ++G L +AF+++  M  K 
Sbjct: 135 LIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 194

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY  L++G  K G  D A ++  +M Q GL  +    +  +    R   M EAE
Sbjct: 195 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 254

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---------------- 164
           E+  +M+  G+ PD+V+++ L+  F ++G++  AL   +EM S                 
Sbjct: 255 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 314

Query: 165 ------------------GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
                             GL PD   Y  ++NG  + G    AL++ +EM  +  + + +
Sbjct: 315 FKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAI 374

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           T N ++NGLC A  +  A D+  EM+  G++P   T+  L++   K    +  L   +++
Sbjct: 375 TCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELL 434

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               +K D   YN LI   CK+G   KA  +  DM  R I  +  +Y  LI+GYC   H+
Sbjct: 435 VNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHL 494

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             AF  +  M+ + + P + + N ++ G  ++G   +AD+ LS++   G+ P++ +Y TL
Sbjct: 495 KRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETL 554

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           + G  +  N  +   +  +M  +G +P    YN+++  F + G+M  ++ ++  M  KG+
Sbjct: 555 MCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGV 614

Query: 447 NPDRSTYTTLINGHVS-------QNNLK-----EAFRFHDEMLQRGFVP 483
           +P  +TY  LI G  +        + LK     EA R   EM  RGFVP
Sbjct: 615 SPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVP 663



 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 245/481 (50%), Gaps = 1/481 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            LCK  K+   K+ L EM + G+  + V+Y  L++A  + G + EA   +  M  +G   
Sbjct: 33  GLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNF 92

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V     LI+GL K G+   A+ +   + Q+ L P+  TY+ L+   C+  +++ AE   
Sbjct: 93  DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESAL 152

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM  +   P+++++S+LI  + + G L  A    R+M     +P+   Y I+++G  + 
Sbjct: 153 HEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKA 212

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G+   AL +  +M + G   +V   +  +N + R+  + EA++L  +M   G+ PD   +
Sbjct: 213 GWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNY 272

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           T L+ G  K G ++ ALNL   MT K++  DIVT+N LI+   K+G+ +    +++ M  
Sbjct: 273 TNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSD-TESIYSAMRE 331

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             +SP+  +Y  ++NG    G+ T A  LW EM  + + P  ++CN +I G C +G    
Sbjct: 332 MGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMEN 391

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A + L +MV  G+ P S +Y  L+N   +    D        + N  L  D   YN++++
Sbjct: 392 AIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILIS 451

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             C+ G    +  +L  M E+G+  D +TY  LI+G+   ++LK AF  +  ML     P
Sbjct: 452 NLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSP 511

Query: 484 D 484
           D
Sbjct: 512 D 512



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 223/413 (53%), Gaps = 1/413 (0%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           LEEA  L   M G G+ P V T+ S++ GLCK G+    K +L EM +MG++ +  +Y  
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           LL    +   ++EA      M  RG   D+++ + LI    ++GQ+  A   F  +    
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN 124

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           LVP+ + Y+ +I+G C+ G +  A     EM EK CV +V+TY++++NG  +  +L +A 
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            +  +M+ +   P+  T+  L+ G  K G  + AL+L+  M Q  +K ++   +  ++  
Sbjct: 185 KVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 244

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
            + G ME+A +L A M S  + P+ ++Y  L++G+   G V+ A  L  EM  K +   +
Sbjct: 245 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 304

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ N +I    + G  S  +   S M   G+ PD  +YNT++NG  ++ N   A  L ++
Sbjct: 305 VTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNE 363

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           M+++ L+P+ IT N+++ G C  GRM ++  IL  M+  GL P  +TY  L+N
Sbjct: 364 MKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLN 416



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 232/449 (51%), Gaps = 13/449 (2%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           VN + +  +++ A+  + +M   G+ PD V Y  L++ + + G +  A  L   M+ K +
Sbjct: 241 VNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNV 300

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
              + T+N LIN L K G+ D  + +   M +MGLSPD ATYNT+L  + +K N + A E
Sbjct: 301 VFDIVTFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALE 359

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           ++ EM  R + P+ ++ + +I      G+++ A+   +EM   GL P +  Y I++N   
Sbjct: 360 LWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISS 419

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++      L+  + ++     +D   YN +++ LC+  M  +A  +  +M ERG+  D  
Sbjct: 420 KSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTT 479

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  LIHG+C   ++ +A   +  M  + + PDI TYN L+ G  K G + +A+ L +++
Sbjct: 480 TYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEI 539

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R + PN  +Y  L+ G+C + +  E  R++ EMV KG  P   + N +I  + + G  
Sbjct: 540 KKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKM 599

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD------------KAFALVSKMENQ 409
            +A E +++M ++GV P   +Y+ LI G+     M             +A  L  +M ++
Sbjct: 600 KQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDR 659

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELIL 438
           G VP   T   I + F   G+  D+ ++L
Sbjct: 660 GFVPCESTQACISSTFAAPGKKADARMLL 688



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 208/372 (55%), Gaps = 1/372 (0%)

Query: 113 KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           +  + EA  ++ EM   G+ PD+V+F +++    ++G+L    +  REM   G+  +NV 
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           YTI+++   + G V EAL     M+ +G   DV+    +++GL ++  + EA+ LF  + 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
           +  + P++ T++ LI G CK G++N A +    M +K   P+++TY++LI+G+ K G + 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
            A K+   M+ +   PN  +Y IL++G    G    A  L+ +M   G+K  +   +  +
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
               RSG   +A+E ++KM S G+ PD ++Y  L++GF++   +  A  L  +M ++ +V
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            D++T+NV++    + G+  D+E I   M E GL+PD +TY T++NG+  + N   A   
Sbjct: 302 FDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALEL 360

Query: 473 HDEMLQRGFVPD 484
            +EM  R  +P+
Sbjct: 361 WNEMKSRKLIPN 372


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 250/470 (53%), Gaps = 2/470 (0%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREG-FLEEAFQLMNSMSGK-GLKPGVFTYNS 70
           SA   L ++  +G   D    N ++NA C +G  ++EA +L+  +    G  P V +YN+
Sbjct: 171 SAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNA 230

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           ++ GLC   R  R +++++EM+++G  P+  T+NTL+   CR        ++  +M   G
Sbjct: 231 VLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG 290

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             PDI  ++T++    + G L+ A      M S GL P+ V Y  ++ G C      +A 
Sbjct: 291 CTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAE 350

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++  EM +  C +D VT+N +++  C+  ++    +L  +MLE G  PD  T+TT+I+G 
Sbjct: 351 ELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGF 410

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK+G +++A+ L   M     +P+ ++Y  ++ G C       A  L + MI +  SPN 
Sbjct: 411 CKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNP 470

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +++  +IN  C  G V +A  L  +M+  G  P L+S +T+I G  ++G   +A E L+ 
Sbjct: 471 VTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 530

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV++G+ P++I Y+++ +   +E  +++   +   +++  +  D + YN +++  C++G 
Sbjct: 531 MVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGG 590

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
              +   L  M+  G  P+ STYT LI G  S+  +KEA     E+  +G
Sbjct: 591 TDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 222/410 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +    +  + EM + G  P+ VT+NTLI   CR G  E   Q++  M   G
Sbjct: 231 VLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +  Y ++++G+CK+G  + A E+LD M   GL P+   YNT+L   C  E   +AE
Sbjct: 291 CTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAE 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM       D V+F+ L+  F +NG + R +    +M   G VPD + YT +ING+
Sbjct: 351 ELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGF 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA+ +   M   GC  + ++Y  +L GLC A+   +A+DL ++M+E+G  P+ 
Sbjct: 411 CKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNP 470

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF T+I+  CK G + +A+ L   M      PD+++Y+T+IDG  K G+ ++A +L   
Sbjct: 471 VTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 530

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+++ +SPN I Y  + +     G +    +++  +    I+   V  N +I   C+ G 
Sbjct: 531 MVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGG 590

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
             +A EFL+ MVS G  P+  +Y  LI G   E  + +A  +++++ ++G
Sbjct: 591 TDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 235/457 (51%), Gaps = 8/457 (1%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN +++ YCR G L  A +L  S+    + P  +TY  ++  LC +GR   A  VLDEM 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 93  QMGLSPDTATYNTLLVESCRKEN---MSEAEEIFCEMSRRGVAPDIVSFSTLI-GIFSRN 148
           + G +P    Y+ +L  +C +        A  +  ++  RG A D+ + + ++  +  + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 149 GQLDRALMYFREMKSA-GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           G +D AL   R++ ++ G  PD V Y  ++ G C          + +EM+  GC  +VVT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +NT++  LCR  +      +  +M++ G  PD   + T++ G CK+G++  A  + D M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
              +KP++V YNT++ G C     E+A +L A+M       + +++ IL++ +C  G V 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
               L  +M+  G  P +++  T+I G+C+ G   +A   L  M + G  P++ISY  ++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G    E    A  L+S+M  QG  P+ +T+N ++   C++G +  +  +L +M+  G +
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCS 502

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           PD  +Y+T+I+G        EA    + M+ +G  P+
Sbjct: 503 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 539



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 8/283 (2%)

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN +++G CRA  L  A  L   +    V P+ YT+  ++   C  G +  AL++ D M 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 268 QKSIKPDIVTYNTLIDGFCK---VGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           ++   P    Y+ +++  C     G    A ++  D+  R  + +  +  +++N  C  G
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 325 -HVTEAFRLWYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
             V EA RL  ++    G  P +VS N ++KG C +    +  + + +MV  G  P+ ++
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           +NTLI    R    ++   ++++M + G  PD+  Y  +L G C++G +  +  IL RM 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             GL P+   Y T++ G  S    ++A     EM       DD
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDD 365


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 138/440 (31%), Positives = 239/440 (54%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M  +G+ P  VT + LIN YC  G +  AF ++  +  +G +    T  +++ GLC  G
Sbjct: 103 QMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCING 162

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +A E  D ++  G   D  TY TL+   C+     EA E+  +M  + V P++V ++
Sbjct: 163 EVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYN 222

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            ++    ++G +  A   + ++   G+ PD   YT +I+G+C  G   E  ++  +M+++
Sbjct: 223 MIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDR 282

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
              ++V TYN +++ LC+  ML +A D+ N M+ERG  PD  TF TL+ G+C   ++ +A
Sbjct: 283 NVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEA 342

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             LFD   +  I PD+ +YN LI G+CK   +++A  L+  M  +K++PN ++Y  LI+G
Sbjct: 343 RKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDG 402

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G ++ A+ L+  +   G  P +++ N ++   C+     KA E  + M   G+ P+
Sbjct: 403 LCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPN 462

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             SYN LING+ + + +D+A  L  +M  + LVPD +TYN ++ G C+ GR+  +  +  
Sbjct: 463 VSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFN 522

Query: 440 RMIEKGLNPDRSTYTTLING 459
            M + G   D  TY  L + 
Sbjct: 523 VMHDGGPPVDVITYNILFDA 542



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 234/427 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C    +  A   L  + ++G   + +T  T++   C  G + +A +  +S+  +G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 TY +LINGLCK G    A E+L +M    + P+   YN ++   C+   ++EA 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ ++  RG+ PD+ +++ LI  F   GQ         +M    +  +   Y I+I+  
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A  MR+ M+E+G   D+VT+NT+++G C    + EA  LF+   E G+ PD 
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++  LI G+CK+  +++AL+LF+ M  K + P+IVTY++LIDG CK G +  A +L++ 
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +     SPN I+Y I+++  C +  V +A  L+  M  +G+ P + S N +I GYC+S  
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     +M    + PDS++YN LI+G  +   +  A+ L + M + G   DVITYN+
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538

Query: 421 ILTGFCR 427
           +   F +
Sbjct: 539 LFDAFSK 545



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/396 (33%), Positives = 214/396 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC + ++  A  F   +  +G   D VTY TLIN  C+ G   EAF+L++ M G+ 
Sbjct: 154 IMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQV 213

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V  YN +++GLCK G    A+++  +++  G+ PD  TY  L+   C      E  
Sbjct: 214 VRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVT 273

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            + C+M  R V  ++ +++ LI    + G L +A      M   G  PD V +  +++GY
Sbjct: 274 RLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGY 333

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V+EA K+ D   E G   DV +YN ++ G C+   + EA  LFN+M  + + P+ 
Sbjct: 334 CLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNI 393

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LI G CK G ++ A  LF  +      P+++TYN ++D  CK+  ++KA +L+  
Sbjct: 394 VTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNL 453

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R ++PN  SY ILINGYC    + EA  L+ EM  + + P  V+ N +I G C+SG 
Sbjct: 454 MFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGR 513

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
            S A E  + M   G   D I+YN L + F + +++
Sbjct: 514 ISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 238/451 (52%), Gaps = 2/451 (0%)

Query: 38  NAYCREGF--LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           NA  + GF  +++A  L   +      P V  +N ++  + K      A  +  +M   G
Sbjct: 49  NAKKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRG 108

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           ++P   T + L+   C   +M  A  +   + +RG   + ++ +T++     NG++ +AL
Sbjct: 109 ITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKAL 168

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            +   + + G + D V Y  +ING C+ G   EA ++  +M  +    +VV YN I++GL
Sbjct: 169 EFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGL 228

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
           C+  ++TEA DL+++++ RG+ PD +T+T LIHG C  G   +   L   M  +++  ++
Sbjct: 229 CKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNV 288

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
            TYN LID  CK G + KA+ +   MI R   P+ +++  L++GYC    V EA +L+  
Sbjct: 289 YTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDT 348

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
               GI P + S N +I GYC++    +A    +KM  + + P+ ++Y++LI+G  +   
Sbjct: 349 FAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGR 408

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +  A+ L S + + G  P+VITYN++L   C+   +  +  +   M E+GL P+ S+Y  
Sbjct: 409 ISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNI 468

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           LING+     + EA    +EM +R  VPD  
Sbjct: 469 LINGYCKSKRIDEAMNLFEEMHRRNLVPDSV 499



 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 237/470 (50%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID A      +      P  V +N ++ +  +      A  L   M  +G+ P + T + 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LIN  C  G    A  VL  +L+ G   +  T  T++   C    + +A E    +  +G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
              D V++ TLI    + G    A     +M+   + P+ V+Y +I++G C++G V EA 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  +++ +G   DV TY  +++G C      E   L  +M++R V  + YT+  LI   
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CK G + KA ++ ++M ++  +PD+VT+NTL+ G+C   ++ +A KL+       I+P+ 
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            SY ILI GYC    + EA  L+ +M  K + P +V+ +++I G C+SG  S A E  S 
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           +   G  P+ I+YN +++   + + +DKA  L + M  +GL P+V +YN+++ G+C+  R
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + ++  +   M  + L PD  TY  LI+G      +  A+   + M   G
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGG 528


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 242/491 (49%), Gaps = 22/491 (4%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++   K  L  M  +G YP    +N+L++AYC  G    A++L+  M   G  PG   YN
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411

Query: 70  SLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            LI  +C           D A++   EML  G+  +    ++     C      +A  + 
Sbjct: 412 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM  +G  PD  ++S ++       +++ A + F EMK  GLV D   YTI+++ +C+ 
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +A K  +EM E GC  +VVTY  +++   +AK ++ A++LF  ML  G  P+  T+
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591

Query: 244 TTLIHGHCKDGNMNKALNLFDIMT----------------QKSIKPDIVTYNTLIDGFCK 287
           + LI GHCK G + KA  +F+ M                   S +P++VTY  L+DGFCK
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
              +E+A KL   M      PN I Y  LI+G C +G + EA  +  EM   G   TL +
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            +++I  Y +      A + LSKM+     P+ + Y  +I+G  +    D+A+ L+  ME
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G  P+V+TY  ++ GF   G++     +L RM  KG+ P+  TY  LI+       L 
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831

Query: 468 EAFRFHDEMLQ 478
            A    +EM Q
Sbjct: 832 VAHNLLEEMKQ 842



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 249/538 (46%), Gaps = 60/538 (11%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LCK  K   A   L  +E +   PDTV Y  LI+  C     EEA   +N M      P
Sbjct: 279 SLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V TY++L+ G   K +  R K VL+ M+  G  P    +N+L+   C   + S A ++ 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 124 CEMSRRGVAPDIVSFSTLIG-------------------------------------IFS 146
            +M + G  P  V ++ LIG                                      F+
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455

Query: 147 R----NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
           R     G+ ++A    REM   G +PD   Y+ ++N  C    +  A  + +EM   G V
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DV TY  +++  C+A ++ +A   FNEM E G  P+  T+T LIH + K   ++ A  L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK----------------I 306
           F+ M  +   P+IVTY+ LIDG CK G++EKA +++  M   K                 
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            PN ++YG L++G+C    V EA +L   M  +G +P  +  + +I G C+ G   +A E
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
             ++M   G      +Y++LI+ + + +  D A  ++SKM      P+V+ Y  ++ G C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G+  ++  ++  M EKG  P+  TYT +I+G      ++      + M  +G  P+
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 244/498 (48%), Gaps = 20/498 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K + A   + EM  +G  PDT TY+ ++N  C    +E AF L   M   GL   
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  +++  CK G  ++A++  +EM ++G +P+  TY  L+    + + +S A E+F 
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M   G  P+IV++S LI    + GQ+++A                 MYF++       P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +++G+C++  V EA K+ D M  +GC  + + Y+ +++GLC+   L EA ++ 
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            EM E G     YT+++LI  + K    + A  +   M + S  P++V Y  +IDG CKV
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G+ ++A KL   M  +   PN ++Y  +I+G+  +G +     L   M  KG+ P  V+ 
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C++G    A   L +M        +  Y  +I GF +E    ++  L+ ++  
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQ 875

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRM--IEKGLNPDRSTYTTLINGHVSQNNL 466
               P +  Y +++    +  R+  +  +L  +      L    STY +LI      N +
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV 935

Query: 467 KEAFRFHDEMLQRGFVPD 484
           + AF+   EM ++G +P+
Sbjct: 936 ETAFQLFSEMTKKGVIPE 953



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 231/546 (42%), Gaps = 89/546 (16%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK------------------------- 62
           P   TYN LI A+ +   L+ A  +   MS   L+                         
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292

Query: 63  -------PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
                  P    Y  LI+GLC+    + A + L+ M      P+  TY+TLL     K+ 
Sbjct: 293 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 352

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +   + +   M   G  P    F++L+  +  +G    A    ++M   G +P  V+Y I
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNI 412

Query: 176 IINGYCRN----------------------GFVL-------------------EALKMRD 194
           +I   C +                      G VL                   +A  +  
Sbjct: 413 LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM+ +G + D  TY+ +LN LC A  +  A  LF EM   G+  D YT+T ++   CK G
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            + +A   F+ M +    P++VTY  LI  + K  ++  AN+L+  M+S    PN ++Y 
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGK----------------GIKPTLVSCNTIIKGYCRS 358
            LI+G+C  G V +A +++  M G                   +P +V+   ++ G+C+S
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               +A + L  M  EG +P+ I Y+ LI+G  +   +D+A  + ++M   G    + TY
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++  + +  R   +  +L +M+E    P+   YT +I+G        EA++    M +
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772

Query: 479 RGFVPD 484
           +G  P+
Sbjct: 773 KGCQPN 778



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 198/439 (45%), Gaps = 54/439 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +++A  K  K+  A      M  +G  P+ VTY+ LI+ +C+ G +E+A Q+   M G  
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618

Query: 60  ---------------GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                            +P V TY +L++G CK  R + A+++LD M   G  P+   Y+
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   + EA+E+  EMS  G    + ++S+LI  + +  + D A     +M   
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V+YT +I+G C+ G   EA K+   M EKGC  +VVTY  +++G      +   
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK--------------- 269
            +L   M  +GV P++ T+  LI   CK+G ++ A NL + M Q                
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858

Query: 270 ------------------SIKPDIVTYNTLIDGFCKVGEMEKANKLWADM--ISRKISPN 309
                                P +  Y  LID   K   +E A +L  ++   S  +   
Sbjct: 859 FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA---DE 366
             +Y  LI   C    V  AF+L+ EM  KG+ P + S  ++IKG  R+   S+A    +
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978

Query: 367 FLSKMVSEGVDPDSISYNT 385
           F+S M  + ++    S  T
Sbjct: 979 FISHMEIQWIEEKKTSDGT 997



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 196/435 (45%), Gaps = 17/435 (3%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY----NTLLVESCRKEN 115
           G K     YN+L++ + +    D  ++V +E LQ     D   +    N L+ + CR  +
Sbjct: 160 GYKHTAPVYNALVDLIVR----DDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGS 215

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
            S A E    +      P   +++ LI  F +  +LD A +  REM  A L  D      
Sbjct: 216 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
                C+ G   EAL + +    +  V D V Y  +++GLC A +  EA D  N M    
Sbjct: 276 FAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  T++TL+ G      + +   + ++M  +   P    +N+L+  +C  G+   A 
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392

Query: 296 KLWADMISRKISPNYISYGILINGYC------SMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           KL   M+     P Y+ Y ILI   C      +   +  A + + EM+  G+    ++ +
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +  +  C +G   KA   + +M+ +G  PD+ +Y+ ++N       M+ AF L  +M+  
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           GLV DV TY +++  FC+ G +  +      M E G  P+  TYT LI+ ++    +  A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572

Query: 470 FRFHDEMLQRGFVPD 484
               + ML  G +P+
Sbjct: 573 NELFETMLSEGCLPN 587



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 206/477 (43%), Gaps = 15/477 (3%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCR---EGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           F+    Q G       YN L++   R   E   EE  Q +     +    G F  N L+ 
Sbjct: 152 FVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVF--GEFL-NVLVR 208

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
             C+ G    A E L  +      P  +TYN L+    + + +  A  I  EMS   +  
Sbjct: 209 KHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRM 268

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D  +         + G+   AL     +++   VPD V YT +I+G C      EA+   
Sbjct: 269 DGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           + M    C+ +VVTY+T+L G    K L     + N M+  G +P    F +L+H +C  
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE------MEKANKLWADMISRKIS 307
           G+ + A  L   M +    P  V YN LI   C   +      ++ A K +++M++  + 
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            N I+        CS G   +AF +  EM+G+G  P   + + ++   C +     A   
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M   G+  D  +Y  +++ F +   +++A    ++M   G  P+V+TY  ++  + +
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++  +  +   M+ +G  P+  TY+ LI+GH     +++A +  + M     VPD
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 152/521 (29%), Positives = 259/521 (49%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCK +++D A     +MEQ    P    YNT+I  Y   G  +EA+ L+     +G
Sbjct: 309 MIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368

Query: 61  LKPGVF----------------------------------TYNSLINGLCKKGRCDRAKE 86
             P V                                   TYN LI+ LCK G  + A +
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFK 428

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           V D M + GL P+  T N ++   C+ + + EA  IF  M+ +  +PD V+F +LI    
Sbjct: 429 VRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLG 488

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + G++D A   + +M  +  +P+ V+YT +I  + + G   +  K+  EM+ +GC  D+ 
Sbjct: 489 KQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLR 548

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
             N  ++ + +A    +   LF E+  RG  PD  +++ LIHG  K G   +   LF  M
Sbjct: 549 LLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAM 608

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++    D   YNT IDGFCK G++ KA +L  +M ++   P  ++YG +I+G   +  +
Sbjct: 609 KEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRL 668

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA+ L+ E    G++  +V  +++I G+ + G   +A   + +++ +G+ P+  ++N L
Sbjct: 669 DEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 728

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-G 445
           ++  V+ E +++A      M+N    P+ ITY++++ G CR  R  +   + W+ ++K G
Sbjct: 729 LDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRV-RKFNKAFVFWQEMQKQG 787

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L P+  TYTT+I G     N+ EA    +     G VPD A
Sbjct: 788 LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSA 828



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 244/469 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++++A      M++ G++P+ +T N +I+  C+   L+EA  +   M+ K 
Sbjct: 413 LIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKI 472

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+ SLI+GL K+GR D A  + ++ML     P+   Y +L+    +     +  
Sbjct: 473 CSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGH 532

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF EM  RG +PD+   +  +    + G+  +    F E+KS G +PD + Y+I+I+G 
Sbjct: 533 KIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGL 592

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF  E  ++   M E+GCV+D   YNT ++G C++  + +A  L  EM  +G  P  
Sbjct: 593 VKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTV 652

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I G  K   +++A  LF+      ++ ++V Y++LIDGF KVG +++A  +  +
Sbjct: 653 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEE 712

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + ++PN  ++  L++       + EA   +  M      P  ++ + +I G CR   
Sbjct: 713 LMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRK 772

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M  +G+ P++I+Y T+I G  +  N+ +A +L  + +  G VPD  +YN 
Sbjct: 773 FNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNA 832

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           I+ G     R  ++  I      KG N    T   L++       L++A
Sbjct: 833 IIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881



 Score =  237 bits (605), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 252/540 (46%), Gaps = 71/540 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL    + D       +M++ G       + T+I  + REG L+ A  L++ M    
Sbjct: 204 LIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNC 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   +  YN  I+   K G+ D A +   E+   GL PD  TY +++   C+   + EA 
Sbjct: 264 LHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAV 323

Query: 121 EIFCEMSR-----------------------------------RGVAPDIVSFSTLIGIF 145
           EIF +M +                                   RG  P +++++ ++   
Sbjct: 324 EIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCL 383

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G+L  AL  F EMK     P+   Y ++I+  C+ G V  A K+RD M E G   +V
Sbjct: 384 GKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNV 442

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +T N +++ LC+AK L EA  +F  M  +   PD  TF +LI G  K G ++ A  L++ 
Sbjct: 443 MTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQ 502

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY--------------- 310
           M      P+ V Y +LI  F K G  E  +K++ +MI R  SP+                
Sbjct: 503 MLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGE 562

Query: 311 --------------------ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
                               +SY ILI+G    G   E + L+Y M  +G      + NT
Sbjct: 563 TGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNT 622

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
            I G+C+SG  +KA + L +M ++G  P  ++Y ++I+G  + + +D+A+ L  + ++ G
Sbjct: 623 FIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 682

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           L  +V+ Y+ ++ GF + GR+ ++ LI+  +++KGL P+  T+  L++  V    + EA 
Sbjct: 683 LELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 742



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 236/514 (45%), Gaps = 36/514 (7%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           + K+ K D  +  L EM   G  P T T   LI +  +   L E F L+  M     +P 
Sbjct: 138 MAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPA 197

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
              Y +LI  L      D    +  +M ++G       + T++    R+  +  A  +  
Sbjct: 198 FSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLD 257

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM    +  DIV ++  I  F + G++D A  +F E+KS GL+PD+V YT +I   C+  
Sbjct: 258 EMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGN 317

Query: 185 FVLEALKMRDEMLE-----------------------------------KGCVMDVVTYN 209
            + EA+++ ++M +                                   +GC+  V+ YN
Sbjct: 318 RLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYN 377

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            IL  L +   L EA   F EM ++   P+  T+  LI   CK G +  A  + D M + 
Sbjct: 378 CILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEA 436

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            + P+++T N +ID  CK  ++++A  ++  M  +  SP+ +++  LI+G    G V +A
Sbjct: 437 GLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDA 496

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
           +RL+ +M+     P  V   ++IK + + G      +   +M+  G  PD    N  ++ 
Sbjct: 497 YRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDC 556

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             +     K  AL  +++++G +PDV++Y++++ G  + G   ++  + + M E+G   D
Sbjct: 557 VFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLD 616

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              Y T I+G      + +A++  +EM  +G  P
Sbjct: 617 THAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQP 650



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 202/418 (48%), Gaps = 1/418 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            Y+SL+  + K  + D  +++L EM   G  P T T   L++   +   + E  ++   M
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            +    P   +++TLIG  S   + D  L  F +M+  G      L+T +I  + R G +
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL + DEM       D+V YN  ++   +A  +  A   F+E+   G+ PD  T+T++
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I   CK   +++A+ +F+ M Q    P    YNT+I G+   G+ ++A  L     +R  
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGC 369

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I+Y  ++      G + EA R + EM  K   P L + N +I   C++G+   A +
Sbjct: 370 IPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFK 428

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M   G+ P+ ++ N +I+   + + +D+A ++   M ++   PD +T+  ++ G  
Sbjct: 429 VRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLG 488

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +QGR+ D+  +  +M++    P+   YT+LI         ++  +   EM+ RG  PD
Sbjct: 489 KQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPD 546



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 60/151 (39%)

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM   G  P+  +C  +I    +S    +  + +  M      P   +Y TLI      +
Sbjct: 153 EMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQ 212

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
             D    L  +M+  G    V  +  ++  F R+GR+  +  +L  M    L+ D   Y 
Sbjct: 213 ESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYN 272

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             I+       +  A++F  E+   G +PDD
Sbjct: 273 VCIDCFGKAGKVDMAWKFFHEIKSHGLLPDD 303


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 242/491 (49%), Gaps = 22/491 (4%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++   K  L  M  +G YP    +N+L++AYC  G    A++L+  M   G  PG   YN
Sbjct: 311 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 370

Query: 70  SLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            LI  +C           D A++   EML  G+  +    ++     C      +A  + 
Sbjct: 371 ILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 430

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM  +G  PD  ++S ++       +++ A + F EMK  GLV D   YTI+++ +C+ 
Sbjct: 431 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 490

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +A K  +EM E GC  +VVTY  +++   +AK ++ A++LF  ML  G  P+  T+
Sbjct: 491 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 550

Query: 244 TTLIHGHCKDGNMNKALNLFDIMT----------------QKSIKPDIVTYNTLIDGFCK 287
           + LI GHCK G + KA  +F+ M                   S +P++VTY  L+DGFCK
Sbjct: 551 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 610

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
              +E+A KL   M      PN I Y  LI+G C +G + EA  +  EM   G   TL +
Sbjct: 611 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 670

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            +++I  Y +      A + LSKM+     P+ + Y  +I+G  +    D+A+ L+  ME
Sbjct: 671 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 730

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G  P+V+TY  ++ GF   G++     +L RM  KG+ P+  TY  LI+       L 
Sbjct: 731 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 790

Query: 468 EAFRFHDEMLQ 478
            A    +EM Q
Sbjct: 791 VAHNLLEEMKQ 801



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 249/538 (46%), Gaps = 60/538 (11%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LCK  K   A   L  +E +   PDTV Y  LI+  C     EEA   +N M      P
Sbjct: 238 SLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V TY++L+ G   K +  R K VL+ M+  G  P    +N+L+   C   + S A ++ 
Sbjct: 295 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 354

Query: 124 CEMSRRGVAPDIVSFSTLIG-------------------------------------IFS 146
            +M + G  P  V ++ LIG                                      F+
Sbjct: 355 KKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFT 414

Query: 147 R----NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
           R     G+ ++A    REM   G +PD   Y+ ++N  C    +  A  + +EM   G V
Sbjct: 415 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 474

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DV TY  +++  C+A ++ +A   FNEM E G  P+  T+T LIH + K   ++ A  L
Sbjct: 475 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 534

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK----------------I 306
           F+ M  +   P+IVTY+ LIDG CK G++EKA +++  M   K                 
Sbjct: 535 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 594

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            PN ++YG L++G+C    V EA +L   M  +G +P  +  + +I G C+ G   +A E
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 654

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
             ++M   G      +Y++LI+ + + +  D A  ++SKM      P+V+ Y  ++ G C
Sbjct: 655 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 714

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G+  ++  ++  M EKG  P+  TYT +I+G      ++      + M  +G  P+
Sbjct: 715 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 772



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 244/498 (48%), Gaps = 20/498 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K + A   + EM  +G  PDT TY+ ++N  C    +E AF L   M   GL   
Sbjct: 417 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 476

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  +++  CK G  ++A++  +EM ++G +P+  TY  L+    + + +S A E+F 
Sbjct: 477 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 536

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M   G  P+IV++S LI    + GQ+++A                 MYF++       P
Sbjct: 537 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 596

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +++G+C++  V EA K+ D M  +GC  + + Y+ +++GLC+   L EA ++ 
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 656

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            EM E G     YT+++LI  + K    + A  +   M + S  P++V Y  +IDG CKV
Sbjct: 657 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 716

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G+ ++A KL   M  +   PN ++Y  +I+G+  +G +     L   M  KG+ P  V+ 
Sbjct: 717 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 776

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C++G    A   L +M        +  Y  +I GF +E    ++  L+ ++  
Sbjct: 777 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQ 834

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRM--IEKGLNPDRSTYTTLINGHVSQNNL 466
               P +  Y +++    +  R+  +  +L  +      L    STY +LI      N +
Sbjct: 835 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV 894

Query: 467 KEAFRFHDEMLQRGFVPD 484
           + AF+   EM ++G +P+
Sbjct: 895 ETAFQLFSEMTKKGVIPE 912



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 231/546 (42%), Gaps = 89/546 (16%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK------------------------- 62
           P   TYN LI A+ +   L+ A  +   MS   L+                         
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251

Query: 63  -------PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
                  P    Y  LI+GLC+    + A + L+ M      P+  TY+TLL     K+ 
Sbjct: 252 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 311

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +   + +   M   G  P    F++L+  +  +G    A    ++M   G +P  V+Y I
Sbjct: 312 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNI 371

Query: 176 IINGYCRN----------------------GFVL-------------------EALKMRD 194
           +I   C +                      G VL                   +A  +  
Sbjct: 372 LIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 431

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM+ +G + D  TY+ +LN LC A  +  A  LF EM   G+  D YT+T ++   CK G
Sbjct: 432 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 491

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            + +A   F+ M +    P++VTY  LI  + K  ++  AN+L+  M+S    PN ++Y 
Sbjct: 492 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 551

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGK----------------GIKPTLVSCNTIIKGYCRS 358
            LI+G+C  G V +A +++  M G                   +P +V+   ++ G+C+S
Sbjct: 552 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 611

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               +A + L  M  EG +P+ I Y+ LI+G  +   +D+A  + ++M   G    + TY
Sbjct: 612 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 671

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++  + +  R   +  +L +M+E    P+   YT +I+G        EA++    M +
Sbjct: 672 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 731

Query: 479 RGFVPD 484
           +G  P+
Sbjct: 732 KGCQPN 737



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 194/426 (45%), Gaps = 54/426 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +++A  K  K+  A      M  +G  P+ VTY+ LI+ +C+ G +E+A Q+   M G  
Sbjct: 518 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 577

Query: 60  ---------------GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                            +P V TY +L++G CK  R + A+++LD M   G  P+   Y+
Sbjct: 578 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 637

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   + EA+E+  EMS  G    + ++S+LI  + +  + D A     +M   
Sbjct: 638 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 697

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V+YT +I+G C+ G   EA K+   M EKGC  +VVTY  +++G      +   
Sbjct: 698 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 757

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK--------------- 269
            +L   M  +GV P++ T+  LI   CK+G ++ A NL + M Q                
Sbjct: 758 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 817

Query: 270 ------------------SIKPDIVTYNTLIDGFCKVGEMEKANKLWADM--ISRKISPN 309
                                P +  Y  LID   K   +E A +L  ++   S  +   
Sbjct: 818 FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 877

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA---DE 366
             +Y  LI   C    V  AF+L+ EM  KG+ P + S  ++IKG  R+   S+A    +
Sbjct: 878 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 937

Query: 367 FLSKMV 372
           F+S MV
Sbjct: 938 FISHMV 943



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 196/435 (45%), Gaps = 17/435 (3%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY----NTLLVESCRKEN 115
           G K     YN+L++ + +    D  ++V +E LQ     D   +    N L+ + CR  +
Sbjct: 119 GYKHTAPVYNALVDLIVR----DDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGS 174

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
            S A E    +      P   +++ LI  F +  +LD A +  REM  A L  D      
Sbjct: 175 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 234

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
                C+ G   EAL + +    +  V D V Y  +++GLC A +  EA D  N M    
Sbjct: 235 FAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 291

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  T++TL+ G      + +   + ++M  +   P    +N+L+  +C  G+   A 
Sbjct: 292 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 351

Query: 296 KLWADMISRKISPNYISYGILINGYC------SMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           KL   M+     P Y+ Y ILI   C      +   +  A + + EM+  G+    ++ +
Sbjct: 352 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVS 411

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +  +  C +G   KA   + +M+ +G  PD+ +Y+ ++N       M+ AF L  +M+  
Sbjct: 412 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 471

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           GLV DV TY +++  FC+ G +  +      M E G  P+  TYT LI+ ++    +  A
Sbjct: 472 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 531

Query: 470 FRFHDEMLQRGFVPD 484
               + ML  G +P+
Sbjct: 532 NELFETMLSEGCLPN 546



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 207/481 (43%), Gaps = 23/481 (4%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCR-------EGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           F+    Q G       YN L++   R       E FL++       + G+ L       N
Sbjct: 111 FVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFL-------N 163

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            L+   C+ G    A E L  +      P  +TYN L+    + + +  A  I  EMS  
Sbjct: 164 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 223

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
            +  D  +         + G+   AL     +++   VPD V YT +I+G C      EA
Sbjct: 224 NLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEA 280

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           +   + M    C+ +VVTY+T+L G    K L     + N M+  G +P    F +L+H 
Sbjct: 281 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 340

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE------MEKANKLWADMIS 303
           +C  G+ + A  L   M +    P  V YN LI   C   +      ++ A K +++M++
Sbjct: 341 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLA 400

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             +  N I+        CS G   +AF +  EM+G+G  P   + + ++   C +     
Sbjct: 401 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 460

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A     +M   G+  D  +Y  +++ F +   +++A    ++M   G  P+V+TY  ++ 
Sbjct: 461 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 520

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            + +  ++  +  +   M+ +G  P+  TY+ LI+GH     +++A +  + M     VP
Sbjct: 521 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 580

Query: 484 D 484
           D
Sbjct: 581 D 581


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 155/491 (31%), Positives = 243/491 (49%), Gaps = 22/491 (4%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++   K  L  M  +G YP    +N+L++AYC  G    A++L+  M   G  PG   YN
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411

Query: 70  SLINGLCKKG---RCDR---AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            LI  +C       CD    A++   EML  G+  +    ++     C      +A  + 
Sbjct: 412 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            EM  +G  PD  ++S ++       +++ A + F EMK  GLV D   YTI+++ +C+ 
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +A K  +EM E GC  +VVTY  +++   +AK ++ A++LF  ML  G  P+  T+
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591

Query: 244 TTLIHGHCKDGNMNKALNLFDIMT----------------QKSIKPDIVTYNTLIDGFCK 287
           + LI GHCK G + KA  +F+ M                   S +P++VTY  L+DGFCK
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
              +E+A KL   M      PN I Y  LI+G C +G + EA  +  EM   G   TL +
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            +++I  Y +      A + LSKM+     P+ + Y  +I+G  +    D+A+ L+  ME
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            +G  P+V+TY  ++ GF   G++     +L RM  KG+ P+  TY  LI+       L 
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831

Query: 468 EAFRFHDEMLQ 478
            A    +EM Q
Sbjct: 832 VAHNLLEEMKQ 842



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 249/538 (46%), Gaps = 60/538 (11%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           +LCK  K   A   L  +E +   PDTV Y  LI+  C     EEA   +N M      P
Sbjct: 279 SLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            V TY++L+ G   K +  R K VL+ M+  G  P    +N+L+   C   + S A ++ 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 124 CEMSRRGVAPDIVSFSTLIG-------------------------------------IFS 146
            +M + G  P  V ++ LIG                                      F+
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455

Query: 147 R----NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
           R     G+ ++A    REM   G +PD   Y+ ++N  C    +  A  + +EM   G V
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DV TY  +++  C+A ++ +A   FNEM E G  P+  T+T LIH + K   ++ A  L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK----------------I 306
           F+ M  +   P+IVTY+ LIDG CK G++EKA +++  M   K                 
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            PN ++YG L++G+C    V EA +L   M  +G +P  +  + +I G C+ G   +A E
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
             ++M   G      +Y++LI+ + + +  D A  ++SKM      P+V+ Y  ++ G C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G+  ++  ++  M EKG  P+  TYT +I+G      ++      + M  +G  P+
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 244/498 (48%), Gaps = 20/498 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K + A   + EM  +G  PDT TY+ ++N  C    +E AF L   M   GL   
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  +++  CK G  ++A++  +EM ++G +P+  TY  L+    + + +S A E+F 
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M   G  P+IV++S LI    + GQ+++A                 MYF++       P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +++G+C++  V EA K+ D M  +GC  + + Y+ +++GLC+   L EA ++ 
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            EM E G     YT+++LI  + K    + A  +   M + S  P++V Y  +IDG CKV
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G+ ++A KL   M  +   PN ++Y  +I+G+  +G +     L   M  KG+ P  V+ 
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C++G    A   L +M        +  Y  +I GF +E    ++  L+ ++  
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQ 875

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRM--IEKGLNPDRSTYTTLINGHVSQNNL 466
               P +  Y +++    +  R+  +  +L  +      L    STY +LI      N +
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV 935

Query: 467 KEAFRFHDEMLQRGFVPD 484
           + AF+   EM ++G +P+
Sbjct: 936 ETAFQLFSEMTKKGVIPE 953



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 231/546 (42%), Gaps = 89/546 (16%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK------------------------- 62
           P   TYN LI A+ +   L+ A  +   MS   L+                         
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292

Query: 63  -------PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
                  P    Y  LI+GLC+    + A + L+ M      P+  TY+TLL     K+ 
Sbjct: 293 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 352

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +   + +   M   G  P    F++L+  +  +G    A    ++M   G +P  V+Y I
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNI 412

Query: 176 IINGYCRN----------------------GFVL-------------------EALKMRD 194
           +I   C +                      G VL                   +A  +  
Sbjct: 413 LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM+ +G + D  TY+ +LN LC A  +  A  LF EM   G+  D YT+T ++   CK G
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            + +A   F+ M +    P++VTY  LI  + K  ++  AN+L+  M+S    PN ++Y 
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGK----------------GIKPTLVSCNTIIKGYCRS 358
            LI+G+C  G V +A +++  M G                   +P +V+   ++ G+C+S
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               +A + L  M  EG +P+ I Y+ LI+G  +   +D+A  + ++M   G    + TY
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++  + +  R   +  +L +M+E    P+   YT +I+G        EA++    M +
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772

Query: 479 RGFVPD 484
           +G  P+
Sbjct: 773 KGCQPN 778



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 194/426 (45%), Gaps = 54/426 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +++A  K  K+  A      M  +G  P+ VTY+ LI+ +C+ G +E+A Q+   M G  
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618

Query: 60  ---------------GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                            +P V TY +L++G CK  R + A+++LD M   G  P+   Y+
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   + EA+E+  EMS  G    + ++S+LI  + +  + D A     +M   
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V+YT +I+G C+ G   EA K+   M EKGC  +VVTY  +++G      +   
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK--------------- 269
            +L   M  +GV P++ T+  LI   CK+G ++ A NL + M Q                
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858

Query: 270 ------------------SIKPDIVTYNTLIDGFCKVGEMEKANKLWADM--ISRKISPN 309
                                P +  Y  LID   K   +E A +L  ++   S  +   
Sbjct: 859 FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA---DE 366
             +Y  LI   C    V  AF+L+ EM  KG+ P + S  ++IKG  R+   S+A    +
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978

Query: 367 FLSKMV 372
           F+S MV
Sbjct: 979 FISHMV 984



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 196/435 (45%), Gaps = 17/435 (3%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY----NTLLVESCRKEN 115
           G K     YN+L++ + +    D  ++V +E LQ     D   +    N L+ + CR  +
Sbjct: 160 GYKHTAPVYNALVDLIVR----DDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGS 215

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
            S A E    +      P   +++ LI  F +  +LD A +  REM  A L  D      
Sbjct: 216 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
                C+ G   EAL + +    +  V D V Y  +++GLC A +  EA D  N M    
Sbjct: 276 FAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  T++TL+ G      + +   + ++M  +   P    +N+L+  +C  G+   A 
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392

Query: 296 KLWADMISRKISPNYISYGILINGYC------SMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           KL   M+     P Y+ Y ILI   C      +   +  A + + EM+  G+    ++ +
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           +  +  C +G   KA   + +M+ +G  PD+ +Y+ ++N       M+ AF L  +M+  
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           GLV DV TY +++  FC+ G +  +      M E G  P+  TYT LI+ ++    +  A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572

Query: 470 FRFHDEMLQRGFVPD 484
               + ML  G +P+
Sbjct: 573 NELFETMLSEGCLPN 587



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 206/477 (43%), Gaps = 15/477 (3%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCR---EGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           F+    Q G       YN L++   R   E   EE  Q +     +    G F  N L+ 
Sbjct: 152 FVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVF--GEFL-NVLVR 208

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
             C+ G    A E L  +      P  +TYN L+    + + +  A  I  EMS   +  
Sbjct: 209 KHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRM 268

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D  +         + G+   AL     +++   VPD V YT +I+G C      EA+   
Sbjct: 269 DGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           + M    C+ +VVTY+T+L G    K L     + N M+  G +P    F +L+H +C  
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE------MEKANKLWADMISRKIS 307
           G+ + A  L   M +    P  V YN LI   C   +      ++ A K +++M++  + 
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            N I+        CS G   +AF +  EM+G+G  P   + + ++   C +     A   
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +M   G+  D  +Y  +++ F +   +++A    ++M   G  P+V+TY  ++  + +
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++  +  +   M+ +G  P+  TY+ LI+GH     +++A +  + M     VPD
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 244/484 (50%), Gaps = 29/484 (5%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKK-- 78
           M  +G YP  + +N+L++AYCR G    A++L+  M   G +PG   YN LI G+C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 79  -------GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
                  G  +RA    +EML+MG+  +           C      +A  +  EM  +G 
Sbjct: 62  LPSMEVIGLAERA---YNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGF 118

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            PD  ++S +IG      ++++A   F+EMK  G+ PD   YT +++ +C+ G + +A  
Sbjct: 119 IPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARN 178

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
             DEM + GC  +VVTY  +++   + + L+ A+++F  ML  G  P+  T+T LI GHC
Sbjct: 179 WFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHC 238

Query: 252 KDGNMNKALNLFDIMTQKSI-----------------KPDIVTYNTLIDGFCKVGEMEKA 294
           K G   KA  ++  M    +                 +P++VTY  L+DG CK  ++++A
Sbjct: 239 KAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEA 298

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L   M      PN I Y  LI+G+C +G + EA  ++ +M+G G  P + + +++I  
Sbjct: 299 RDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDK 358

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             +      A + L+KM+     P+ + Y  +++G  +    D+A+ L+  ME +G  P+
Sbjct: 359 LFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPN 418

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V+TY  ++ GF + GR+     +L  M  KG  P+  TY  LIN   +   L +A +  +
Sbjct: 419 VVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLE 478

Query: 475 EMLQ 478
           EM Q
Sbjct: 479 EMKQ 482



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 148/498 (29%), Positives = 249/498 (50%), Gaps = 22/498 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K + A   + EM  KG  PD+ TY+ +I   C    +E+AFQL   M   G+ P 
Sbjct: 97  LCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPD 156

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY +L++  CK G  ++A+   DEM Q G +P+  TY  L+    +   +S A EIF 
Sbjct: 157 VYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFE 216

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-----------------MYFREMKSAGLV 167
            M   G  P+IV+++ LI    + G+ ++A                  +YFR + S    
Sbjct: 217 MMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE 276

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
           P+ V Y  +++G C+   V EA  + + M  +GC  + + Y+ +++G C+   L EA ++
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           F +ML  G  P+ YT+++LI    KD  ++ AL +   M + S  P++V Y  ++DG CK
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
           VG+ ++A +L   M  +   PN ++Y  +I+G+   G V     L   M  KG  P  ++
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFIT 456

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS-YNTLINGFVREENMDKAFALVSKM 406
              +I   C +G    A + L +M  +   P  I  Y  +I GF  E     +  L++++
Sbjct: 457 YRVLINHCCAAGLLDDAHKLLEEM-KQTYWPKHIGMYRKVIEGFSHE--FVASLGLLAEL 513

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
              G VP +  Y +++  F + GR+ +  L L   +       ++TY +LI        +
Sbjct: 514 SEDGSVPILPVYKLLIDNFIKAGRL-EMALELHEELSSFSAAYQNTYVSLIESLTLACKV 572

Query: 467 KEAFRFHDEMLQRGFVPD 484
            +AF+ + +M +RGFVP+
Sbjct: 573 DKAFKLYSDMTRRGFVPE 590



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 201/451 (44%), Gaps = 55/451 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K  K+  A      M   G  P+ VTY  LI+ +C+ G  E+A Q+   M    
Sbjct: 198 LIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDK 257

Query: 61  L-----------------KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY 103
           +                 +P V TY +L++GLCK  +   A+++L+ M   G  P+   Y
Sbjct: 258 VDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIY 317

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
           + L+   C+   + EA+E+F +M   G +P++ ++S+LI    ++ +LD AL    +M  
Sbjct: 318 DALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLE 377

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
               P+ V+YT +++G C+ G   EA ++   M EKGC  +VVTY  +++G  +A  +  
Sbjct: 378 NSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDR 437

Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
             +L   M  +G  P+F T+  LI+  C  G ++ A  L + M Q      I  Y  +I+
Sbjct: 438 CLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIE 497

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           GF    E   +  L A++      P    Y +LI+ +   G +  A  L  E+       
Sbjct: 498 GFSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEEL------- 548

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
                         S  A+  + ++S                LI        +DKAF L 
Sbjct: 549 -------------SSFSAAYQNTYVS----------------LIESLTLACKVDKAFKLY 579

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           S M  +G VP++     ++ G  R G+  ++
Sbjct: 580 SDMTRRGFVPELSMLVCLIKGLLRVGKWEEA 610



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 166/332 (50%), Gaps = 3/332 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK HK+  A+  L  M  +G  P+ + Y+ LI+ +C+ G L+EA ++   M G G
Sbjct: 285 LVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG 344

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V+TY+SLI+ L K  R D A +VL +ML+   +P+   Y  ++   C+     EA 
Sbjct: 345 CSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAY 404

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G  P++V+++ +I  F + G++DR L   + M S G  P+ + Y ++IN  
Sbjct: 405 RLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHC 464

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A K+ +EM +      +  Y  ++ G   +     +  L  E+ E G  P  
Sbjct: 465 CAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPIL 522

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LI    K G +  AL L + ++  S      TY +LI+      +++KA KL++D
Sbjct: 523 PVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSD 581

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           M  R   P       LI G   +G   EA +L
Sbjct: 582 MTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 6/226 (2%)

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC--- 321
           +M  +   P  + +N+L+  +C+ G+   A KL   M+     P Y+ Y ILI G C   
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 322 ---SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
              SM  +  A R + EM+  G+    V+     +  C  G   KA   + +M+S+G  P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           DS +Y+ +I        ++KAF L  +M+  G+ PDV TY  +L  FC+ G +  +    
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             M + G  P+  TYT LI+ ++    L  A    + ML  G VP+
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPN 226



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 102/239 (42%), Gaps = 40/239 (16%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LCK  K D A   +  ME+KG YP+ VTY  +I+ + + G ++   +L+  M+ KG
Sbjct: 390 MVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKG 449

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY  LIN  C  G  D A ++L+EM Q         Y  + +E    E ++   
Sbjct: 450 CAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKV-IEGFSHEFVASLG 508

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL----------------------------- 151
            +  E+S  G  P +  +  LI  F + G+L                             
Sbjct: 509 -LLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLT 567

Query: 152 -----DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                D+A   + +M   G VP+  +   +I G  R G   EAL++ D +    C MD+
Sbjct: 568 LACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI----CQMDI 622



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M++EG  P  + +N+L++ + R  +   A+ L+ KM   G  P  + YN+++ G C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 431 MHDSELI------LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   E+I         M+E G+  ++                ++A+    EM+ +GF+PD
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 485 DA 486
            +
Sbjct: 122 SS 123


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 242/445 (54%), Gaps = 9/445 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +I  A   L EM+  G+ P  VT+ +LI   C   F ++A Q+ + M    
Sbjct: 58  LIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK 117

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL---LVESCRKENMS 117
           +KP  F Y  +I  LCK  + D A    + M+Q G  PD  TY  L   L ++C+ E   
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWE--- 174

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +  +IF EM  +G +P++V+++T++  + + G++D+AL   R +K  G  P   LY+ +I
Sbjct: 175 QGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLI 234

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G C++    EA ++ +  +  G V DV+ Y + ++GLC+A  L EA  +  +M+E G  
Sbjct: 235 DGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCA 292

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  ++  +I+  CKD  +++A  L D   ++   P +     L+DG CK   +E+A  +
Sbjct: 293 PDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVI 352

Query: 298 WADMI-SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
              M+ +   +P+ ++Y  +I+G C    + +A+ +  +M   G  P +V+   II  +C
Sbjct: 353 LERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFC 412

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G   +A E   +M   G   D ++YN LI G+ R   +D+A A++ +M  +G+ P+V+
Sbjct: 413 KVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVV 472

Query: 417 TYNVILTGFCRQGRMHDSELILWRM 441
           + + I+ G C++ R+ ++ L++ +M
Sbjct: 473 SLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 239/463 (51%), Gaps = 3/463 (0%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           + G   +T T N+L+  +  +G   EA+++         +P  FTY +LI G CK  +  
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           +A  +L EM   G++P   T+ +L+ + C      +A +IF +M    V PD   ++ +I
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
           G   +  +LD A  YF  M  +G +PD V YT++++   +     +  ++ +EML KG  
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS 189

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            ++VTY T++NG C+A  + +A  L   +   G  P    ++TLI G CK    ++A  L
Sbjct: 190 PELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEAREL 249

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F+ M    ++ D++ Y + I G CK G++++A  +   MI    +P+ +SY ++I   C 
Sbjct: 250 FE-MAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCK 307

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG-VDPDSI 381
              V+EA  L  + + +   P +  C  ++ G C+S    +A   L +M+  G   P  +
Sbjct: 308 DNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVV 367

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y+ +I+G  + + +D A+ ++ KM   G VPDV+TY  I+  FC+ GR+ ++  +  RM
Sbjct: 368 TYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRM 427

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            E+G   D   Y  LI G+     + EA    +EM  RG  P+
Sbjct: 428 HERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPN 470



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 209/381 (54%), Gaps = 4/381 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK +K+D A  +   M Q G  PD VTY  L+++  +    E+  Q+   M  KG
Sbjct: 128 VIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 187

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY +++NG CK GR D+A  ++  +   G SP  + Y+TL+   C+ +   EA 
Sbjct: 188 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEAR 247

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F EM+  G   D++ +++ I    + G+LD A     +M  AG  PD V Y +II   
Sbjct: 248 ELF-EMAA-GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 305

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-VFPD 239
           C++  V EA ++ D+ +E+ C+  V     +++GLC+++ + EA  +   MLE G   P 
Sbjct: 306 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPS 365

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T++ +I G CK   ++ A  +   M +    PD+VTY  +ID FCKVG +++A +L+ 
Sbjct: 366 VVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 425

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M  R  + + ++Y ILI GYC    V EA  +  EM G+GI+P +VS +TI+ G C+  
Sbjct: 426 RMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKES 485

Query: 360 DASKADEFLSKMVSEGVDPDS 380
              +A   + KM  E + PDS
Sbjct: 486 RVEEARLLMEKMNFESL-PDS 505



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 229/450 (50%), Gaps = 3/450 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD  TY TLI  +C+   + +A  L+  M   G+ P + T+ SLI  LC+    D+A ++
Sbjct: 50  PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             +M+ M + PD   Y  ++   C+   +  A   F  M + G  PD V+++ L+    +
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
             + ++    F EM S G  P+ V Y  ++NGYC+ G + +AL +   +   G       
Sbjct: 170 ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSL 229

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+T+++GLC+     EA +LF   +  G   D   +T+ I G CK G +++A  +   M 
Sbjct: 230 YSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMI 287

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +    PD V+YN +I   CK   + +A +L    + RK  P      +L++G C    V 
Sbjct: 288 EAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVE 347

Query: 328 EAFRLWYEMVGKGIK-PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           EA  +   M+  G + P++V+ + +I G C++     A   L KM   G  PD ++Y  +
Sbjct: 348 EACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAI 407

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+ F +   +D+A  L  +M  +G   DV+ YN+++ G+CR  ++ ++  ++  M  +G+
Sbjct: 408 IDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 467

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
            P+  + +T+++G   ++ ++EA    ++M
Sbjct: 468 QPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 179/354 (50%), Gaps = 2/354 (0%)

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           +R G   +  + ++L+ +F  +G    A   F++       PD+  Y  +I G+C+   +
Sbjct: 9   ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQI 68

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A+ +  EM   G    +VT+ +++  LC      +A  +F++M++  V PD + +T +
Sbjct: 69  PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVV 128

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I   CK   ++ A + F+ M Q    PD VTY  L+    K  + E+ ++++ +M+S+  
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH 188

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           SP  ++Y  ++NGYC  G + +A  L   + G G  P+    +T+I G C+     +A E
Sbjct: 189 SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARE 248

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
                ++ G   D I Y + I+G  +   +D+A A+  KM   G  PD ++YNVI+   C
Sbjct: 249 LFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLC 306

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +  R+ +++ ++ + +E+   P     T L++G      ++EA    + ML+ G
Sbjct: 307 KDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETG 360


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 244/483 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVNA CK   +  AK + C + + G   D+ TY +LI  YC+   L +A+++   M  +G
Sbjct: 196 MVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEG 255

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +Y +LI+G C+ G+ D A E+  +M + G  PD  TY  L+   C     +EA 
Sbjct: 256 CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEAL 315

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F EM   G+ P++ +++ LI  F + G++D  +     M   GLV   V +  +I+GY
Sbjct: 316 KFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGY 375

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A+ + D M       +  TYN ++ G CR K +  A  L N+M E  + P+ 
Sbjct: 376 CKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNL 435

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIHG CK   ++ A  L  +M +    PD  T+   ID  CK+G++E+A++++  
Sbjct: 436 VTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFES 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +    N   Y  LI+GYC     ++A  L+  M+ +G  P  ++ N ++ G  + G 
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   +  M      P   +Y  LI   +RE + D+A   + +M + G  P+V+TY  
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTA 615

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  +CRQGR+ ++E ++ ++ E+G+  D   Y  L+N +     L  AF     M   G
Sbjct: 616 FIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTG 675

Query: 481 FVP 483
             P
Sbjct: 676 CEP 678



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 231/455 (50%)

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
             +YN L     R G ++E   L   M   G++P + ++N+++N  CK G    AK    
Sbjct: 155 VTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC 214

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
            +++ G   D+ TY +L++  C+   + +A ++F  M + G   + VS++ LI  F   G
Sbjct: 215 GLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVG 274

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           ++D AL  F +MK  G  PD   YT+++  +C  G   EALK  +EM+E G   +V TY 
Sbjct: 275 KIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYT 334

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +++  C+   + E  ++ + MLE+G+      F  LI G+CK G M  A+ + D M   
Sbjct: 335 VLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLN 394

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            + P+  TYN LI GFC+   M++A  L   M   K+SPN ++Y  LI+G C    V  A
Sbjct: 395 KVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSA 454

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
           +RL + M+  G  P   +    I   C+ G   +A +    +  +  + +   Y  LI+G
Sbjct: 455 WRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDG 514

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           + + E    A  L  +M  +G  P+ IT+NV+L G  ++G++ D+  ++  M +    P 
Sbjct: 515 YCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPT 574

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             TYT LI   + +++   A  F D+M+  G  P+
Sbjct: 575 VHTYTILIEEILRESDFDRANMFLDQMISSGCQPN 609



 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 235/459 (51%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID       +M   GV P+ +++NT++NA+C+ G +  A      +   G     FTY S
Sbjct: 171 IDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTS 230

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI G CK      A +V + M Q G   +  +Y  L+   C    + EA E+F +M   G
Sbjct: 231 LILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG 290

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             PD+ +++ L+  F   G+   AL +F EM   G+ P+   YT++I+ +C+ G + E +
Sbjct: 291 CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM 350

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           +M   MLEKG V  VV +N +++G C+  M+ +A  + + M    V P+  T+  LI G 
Sbjct: 351 EMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGF 410

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+  +M++A+ L + M +  + P++VTYNTLI G CK   ++ A +L   MI     P+ 
Sbjct: 411 CRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQ 470

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            ++   I+  C MG V +A +++  +  K  +        +I GYC++   S A     +
Sbjct: 471 RTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKR 530

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+ EG  P+SI++N L++G  +E  ++ A +LV  M      P V TY +++    R+  
Sbjct: 531 MLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESD 590

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
              + + L +MI  G  P+  TYT  I  +  Q  L EA
Sbjct: 591 FDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA 629



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 243/469 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK H++  A      M Q+G   + V+Y  LI+ +C  G ++EA +L   M   G
Sbjct: 231 LILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  L+   C+ G+   A +  +EM++ G+ P+  TY  L+   C+   M E  
Sbjct: 291 CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M  +G+   +V F+ LI  + + G ++ A+     MK   + P++  Y  +I G+
Sbjct: 351 EMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGF 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   +  A+ + ++M E     ++VTYNT+++GLC+A+++  A  L + M++ G  PD 
Sbjct: 411 CRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQ 470

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF   I   CK G + +A  +F+ + +K  + +   Y  LIDG+CK  +   A+ L+  
Sbjct: 471 RTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKR 530

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     PN I++ +L++G    G V +A  L   M     KPT+ +   +I+   R  D
Sbjct: 531 MLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESD 590

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A+ FL +M+S G  P+ ++Y   I  + R+  + +A  +V K++ +G++ D   Y+V
Sbjct: 591 FDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDV 650

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++  +   G++  +  +L RM + G  P R TY+ L+   + +   KE 
Sbjct: 651 LVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEG 699



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 230/476 (48%), Gaps = 18/476 (3%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           H + +   F     Q G      +Y  L+    R GFL  A  + NSM    +K  V ++
Sbjct: 82  HPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSM----IKSCVSSH 137

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
                          A+ VL+ +     S    +YN L +   R   + E   +F +M  
Sbjct: 138 --------------EARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLN 183

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            GV P+++SF+T++    + G +  A  YF  +   G   D+  YT +I GYC+   + +
Sbjct: 184 DGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGD 243

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A K+ + M ++GC+ + V+Y  +++G C    + EA +LF +M E G FPD  T+T L+ 
Sbjct: 244 AYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVA 303

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
             C+ G   +AL  F+ M +  I+P++ TY  LID FCKVG+M++  ++ + M+ + +  
Sbjct: 304 AFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVS 363

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + + +  LI+GYC  G + +A  +   M    + P   + N +I G+CR     +A   L
Sbjct: 364 SVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALL 423

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           +KM    + P+ ++YNTLI+G  +   +D A+ L   M   G VPD  T+   +   C+ 
Sbjct: 424 NKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKM 483

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G++  +  +   + EK    +   YT LI+G+       +A      ML  G  P+
Sbjct: 484 GKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPN 539



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 249/547 (45%), Gaps = 61/547 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V A C+  K   A  F  EM + G+ P+  TY  LI+ +C+ G ++E  +++++M  KG
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   V  +N+LI+G CK+G  + A  VLD M    + P++ TYN L+   CRK++M  A 
Sbjct: 361 LVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAM 420

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M    ++P++V+++TLI    +   +D A      M   G VPD   +   I+  
Sbjct: 421 ALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCL 480

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +A ++ + + EK    +   Y  +++G C+A+  ++A  LF  ML  G FP+ 
Sbjct: 481 CKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNS 540

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  L+ G  K+G +  A++L D+M +   KP + TY  LI+   +  + ++AN     
Sbjct: 541 ITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQ 600

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEA------------------------------- 329
           MIS    PN ++Y   I  YC  G + EA                               
Sbjct: 601 MISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQ 660

Query: 330 ----FRLWYEMVGKGIKPTLVSCNTIIKG-----YCRSG--------------------- 359
               F +   M   G +P+  + + ++K      Y + G                     
Sbjct: 661 LDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIA 720

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           D         KMV +G  P+  +Y+ LI G  + E++  AF L + M+  G+ P    +N
Sbjct: 721 DFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHN 780

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +L+  C+ G   ++  +L  M+E        +Y  L+ G   Q N ++A      +L  
Sbjct: 781 SLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSC 840

Query: 480 GFVPDDA 486
           G+  D+ 
Sbjct: 841 GYNYDEV 847



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 215/459 (46%), Gaps = 15/459 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +DSA      M + G  PD  T+   I+  C+ G +E+A Q+  S+  K 
Sbjct: 441 LIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKH 500

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEA 119
            +   F Y +LI+G CK  +   A  +   ML  G  P++ T+N LL +  RKE  + +A
Sbjct: 501 AEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLL-DGLRKEGKVEDA 559

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +   M +    P + +++ LI    R    DRA M+  +M S+G  P+ V YT  I  
Sbjct: 560 MSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKA 619

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YCR G +LEA +M  ++ E+G ++D   Y+ ++N       L  A  +   M + G  P 
Sbjct: 620 YCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPS 679

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG--FCKVGEMEKANKL 297
             T++ L+          K L +F+   ++ +  D+ + N  +D     K+ + E    L
Sbjct: 680 RQTYSILL----------KHL-IFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITML 728

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  M+ +   PN  +Y  LI G C + H++ AFRL+  M   GI P+    N+++   C+
Sbjct: 729 FEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCK 788

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A   L  M+         SY  L+ G   + N +KA  +   + + G   D + 
Sbjct: 789 LGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVV 848

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           + V+L G  R+G + +   +   M + G      T+T L
Sbjct: 849 WKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 105/244 (43%), Gaps = 31/244 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLIN-----AYCREGF---------- 45
           +VNA     ++DSA   L  M   G  P   TY+ L+       Y +EG           
Sbjct: 651 LVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNIS 710

Query: 46  -----------LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
                       E    L   M  +G  P V TY+ LI GLCK      A  + + M + 
Sbjct: 711 VDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKES 770

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDR 153
           G+SP    +N+LL   C+     EA  +   M        + S+  L+ G+F +  Q ++
Sbjct: 771 GISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQ-EK 829

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI-- 211
           A   FR + S G   D V++ ++++G  R G+V E  ++RD M + GC +   T+  +  
Sbjct: 830 AEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQ 889

Query: 212 -LNG 214
            LNG
Sbjct: 890 ELNG 893


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 240/484 (49%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC+   + SA  +L  M + G  PD  T+N+LI  YCR   ++ A  L + M  +G
Sbjct: 17  VIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG 76

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V +Y +LI G C+ GR D A E+  EM Q    PD   Y  L+   C+     E  
Sbjct: 77  FAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGL 132

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G  P   +++ ++       +   A    +EM   GL P  V  T +IN Y
Sbjct: 133 LMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 192

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +AL++ + M  +GC  +V TYN ++ G C    + +A  L N+M   GV PD 
Sbjct: 193 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDA 252

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G C DG++  A  L  +M    +  D  TYN LI+  CK G  ++A  L+  
Sbjct: 253 VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS 312

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + +R I PN +++  LING C  G V  A++   +MV  G  P   + ++ I+  C+   
Sbjct: 313 LETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG 372

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + +   F+ +M+ + V P +++Y  +I+  ++E N         +M + G  PDV+TY  
Sbjct: 373 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTT 432

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  +C +GR++++E +L  M + G+  D   Y TL++GH S      A     +M    
Sbjct: 433 SMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVA 492

Query: 481 FVPD 484
            VP+
Sbjct: 493 SVPN 496



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 216/418 (51%), Gaps = 4/418 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TYN++I  LC++     A   L  M++ G  PD  T+N+L+V  CR   +  A ++F +M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
             RG A D+VS++ LI  F   G++D A+  F EM      PD  +Y  ++ G C+ G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            E L M   M E G       Y  +++  C  +   EA+++  EM E+G+ P   T T +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I+ +CK+G M+ AL + ++M  +  KP++ TYN L+ GFC  G++ KA  L   M    +
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           +P+ ++Y +LI G C  GH+  AFRL   M G G+     + N +I   C+ G   +A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               + + G+ P+++++N+LING  +   +D A+  + KM + G  PD  TY+  +   C
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +     +    +  M++K + P    YT +I+  + + N     R   EM+  G  PD
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPD 426



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 237/486 (48%), Gaps = 21/486 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  +ID A     EM+Q    PD   Y  L+   C+ G  EE   ++  M   G
Sbjct: 87  LIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELG 142

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P    Y ++++  C + +   A+E+L EM + GL+P   T   ++   C++  MS+A 
Sbjct: 143 WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 202

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  RG  P++ +++ L+  F   G++ +A+    +M+  G+ PD V Y ++I G 
Sbjct: 203 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQ 262

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G +  A ++   M   G + D  TYN ++N LC+     +A  LF+ +  RG+ P+ 
Sbjct: 263 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 322

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF +LI+G CK G ++ A    + M      PD  TY++ I+  CK+   ++      +
Sbjct: 323 VTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 382

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+ ++Y I+I+      +     R W EMV  G  P +V+  T ++ YC  G 
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 442

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A+  L +M   GV  D+++YNTL++G       D A +++ +M +   VP+  TY +
Sbjct: 443 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 502

Query: 421 ILTGFCRQGRMHD----SELILWRMIE-------------KGLNPDRSTYTTLINGHVSQ 463
           +L    R   + D    +   +W+ IE                 P+  TY++++ G    
Sbjct: 503 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 562

Query: 464 NNLKEA 469
              +EA
Sbjct: 563 GRTEEA 568



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 249/511 (48%), Gaps = 35/511 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C + K   A+  L EM +KG+ P  VT   +INAYC+EG + +A +++  M  +G
Sbjct: 153 VVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 212

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V+TYN+L+ G C +G+  +A  +L++M   G++PD  TYN L+   C   ++  A 
Sbjct: 213 CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAF 272

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+  D  +++ LI    ++G+ D+A   F  +++ G+ P+ V +  +ING 
Sbjct: 273 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 332

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V  A K  ++M+  GC  D  TY++ +  LC+ K   E      EML++ V P  
Sbjct: 333 CKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 392

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +IH   K+ N       +  M      PD+VTY T +  +C  G + +A  +  +
Sbjct: 393 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 452

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR--- 357
           M    ++ + ++Y  L++G+ S+G    A  +  +M      P   +   +++   R   
Sbjct: 453 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRL 512

Query: 358 ---------SG--------------DASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
                    +G              D  K +EFL         P+S +Y++++ GF  + 
Sbjct: 513 VEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL---------PNSGTYSSILEGFSEDG 563

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
             ++A +LVS M+   +  +   Y  ++T FC+  R  D+ +++  MI+ G  P   +Y 
Sbjct: 564 RTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQ 623

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            L++G + +    +A         + + PD+
Sbjct: 624 HLLSGLICEGQTDKAKEIFMNSRWKDYSPDE 654



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 207/438 (47%), Gaps = 17/438 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C D  I+SA   L  ME  G+  D  TYN LINA C++G  ++A  L +S+  +G
Sbjct: 258 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   T+NSLINGLCK G+ D A + L++M+  G +PDT TY++ +   C+ +   E  
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM ++ V P  V+++ +I    +          + EM S+G  PD V YT  +  Y
Sbjct: 378 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 437

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA  +  EM + G  +D + YNT+++G         A  +  +M      P+ 
Sbjct: 438 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 497

Query: 241 YTFTTLIH-----------------GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           +T+  L+                  G  K   +     LFD+M +    P+  TY+++++
Sbjct: 498 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 557

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           GF + G  E+A  L + M    IS N   Y  L+  +C      +A+ L   M+  G  P
Sbjct: 558 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 617

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            L+S   ++ G    G   KA E       +   PD I +  +I+G +++ + D +  ++
Sbjct: 618 HLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 677

Query: 404 SKMENQGLVPDVITYNVI 421
             +E     P   TY ++
Sbjct: 678 IMLERMNCRPSHQTYAML 695



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM   G  PD VTY T + AYC EG L EA  ++  MS  G+      YN+L++G    G
Sbjct: 417 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 476

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-----------------NMSEAEEI 122
           + D A  +L +M  +   P+  TY  LL    R                    +++   +
Sbjct: 477 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGL 536

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           F  M +    P+  ++S+++  FS +G+ + A      MK   +  +  +YT ++  +C+
Sbjct: 537 FDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCK 596

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           +   L+A  +   M++ G +  +++Y  +L+GL       +A ++F     +   PD   
Sbjct: 597 SKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV 656

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           +  +I G  K G+ + +  +  ++ + + +P   TY  L +
Sbjct: 657 WKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 697



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 52/109 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   CK  +   A + +C M Q G  P  ++Y  L++    EG  ++A ++  +   K 
Sbjct: 590 LVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKD 649

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVE 109
             P    +  +I+GL KKG  D ++E++  + +M   P   TY  L  E
Sbjct: 650 YSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEE 698


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 137/423 (32%), Positives = 230/423 (54%), Gaps = 5/423 (1%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P +  +N ++  L K      A  +  ++   G+ P   T   L+   C    ++    I
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             ++ + G  P+ ++F+TLI     NGQ   AL++   + + G   D V Y I++NG C+
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 183 NGFVLEALKMRDEMLEKGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
            G    A+    +ML K  V  DVV Y+TI++ LC+ K +T+A  L++EM+ +G+FP+ Y
Sbjct: 128 MGETRAAM----QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVY 183

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           TF+ L+   CKD    +A+NL  +M +K +KP++VTY  ++DG+C V ++ KA  ++  M
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVM 243

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +   + PN   Y I+ING C    V EA  L+ EM  K I P +V+ N +I G C+ G  
Sbjct: 244 VQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKI 303

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           S + E + +M S G   D I+YN+L++   +  ++D+A  LV ++++QG+ P+V TY  +
Sbjct: 304 STSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTL 363

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + G C+ GR+ D+ +I   ++ +G +    TY  +ING   +    EA      M     
Sbjct: 364 IDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNAC 423

Query: 482 VPD 484
           +PD
Sbjct: 424 IPD 426



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 236/447 (52%), Gaps = 3/447 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +L K +   +A     ++E  G+ P  VT   L+N YC  G +   F ++  +   G
Sbjct: 16  ILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T+ +LI G+C  G+   A    D ++  G   D  +Y  L+   C+   M E  
Sbjct: 76  YEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK---MGETR 132

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                + +  V  D+V +ST+I    +   +  A   + EM + G+ P+   ++I+++  
Sbjct: 133 AAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDAL 192

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++    +A+ +   M++KG   +VVTY  I++G C    + +A ++FN M++ GV P+ 
Sbjct: 193 CKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNV 252

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +  +I+G CK   +++A+NLF  M  K I PD+VTYN LIDG CK+G++  + +L  +
Sbjct: 253 WCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDE 312

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S   + + I+Y  L++  C   H+ +A  L  E+  +GI+P + +  T+I G C+ G 
Sbjct: 313 MRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGR 372

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     ++++EG      +YN +ING  ++   D+A AL+S+ME+   +PD ++Y  
Sbjct: 373 LEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYET 432

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLN 447
           I+     +G    +  +L  MI +GL+
Sbjct: 433 IIYALSEKGETVKTNKLLCAMIVRGLS 459



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 241/461 (52%), Gaps = 3/461 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M Q    P  + +N ++ +  +      A  L   +   G+KP + T   L+N  C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
                 +L ++L+MG  P++ T+ TL+   C      EA      +   G   D VS++ 
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+    + G+   A+   R+     +  D V+Y+ II+  C+  FV +A ++  EM+ KG
Sbjct: 121 LMNGLCKMGETRAAMQMLRK---TWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              +V T++ +++ LC+ +   +A +L   M+++GV P+  T+  ++ G+C    +NKAL
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           N+F++M Q+ ++P++  YN +I+G CK   +++A  L+ +M  +KI+P+ ++Y ILI+G 
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGL 297

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +G ++ +  L  EM   G    +++ N+++   C++    +A   + ++  +G+ P+ 
Sbjct: 298 CKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNV 357

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +Y TLI+G  ++  ++ A+ +  ++  +G    V TYNV++ G C++G   ++  +L R
Sbjct: 358 CTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSR 417

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           M +    PD  +Y T+I     +    +  +    M+ RG 
Sbjct: 418 MEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 190/345 (55%), Gaps = 3/345 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +  +A   L    +  V  D V Y+T+I++ C+  F+ +A++L + M  KG
Sbjct: 121 LMNGLCKMGETRAAMQML---RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+T++ L++ LCK  +  +A  +L  M++ G+ P+  TY  ++   C    +++A 
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF  M + GV P++  ++ +I    +  ++D A+  F+EM    + PD V Y I+I+G 
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGL 297

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  +L++ DEM   G  +D++TYN++L+ LC+   L +A  L  E+ ++G+ P+ 
Sbjct: 298 CKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNV 357

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI G CKDG +  A  +F  +  +     + TYN +I+G CK G  ++A  L + 
Sbjct: 358 CTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSR 417

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           M      P+ +SY  +I      G   +  +L   M+ +G+   L
Sbjct: 418 MEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRL 462



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 32/251 (12%)

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M Q S  P I+ +N ++    K+     A  L+  +    I P+ ++  IL+N YC  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +T  F +  +++  G +P  ++  T+IKG C +G A +A  F   +V+ G   D +SY  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 386 LINGFVR--------------EENMD------------------KAFALVSKMENQGLVP 413
           L+NG  +                N D                   A+ L S+M  +G+ P
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP 180

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           +V T+++++   C+  +   +  +L  M++KG+ P+  TY  +++G+   N + +A    
Sbjct: 181 NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIF 240

Query: 474 DEMLQRGFVPD 484
           + M+Q G  P+
Sbjct: 241 NVMVQEGVEPN 251


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 255/512 (49%), Gaps = 29/512 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+AL +  +   A     EM ++G  P+  TY  +INA C+E  LEE  ++++ M  KG
Sbjct: 80  IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TYN+LI+G CK+G  + A+E+LD M     +P+  TYN L+   CRK+N+  A 
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAM 199

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M    + P +V++++LI    + G LD A      M   G+VPD   Y++ I+  
Sbjct: 200 ALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTL 259

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  + + + EKG   + V Y  +++G C+A  + +A+ L + ML     P+ 
Sbjct: 260 CKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNS 319

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK+  + +AL L + M QK +K  + TY  LI    K G+ + A+++   
Sbjct: 320 STYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQ 379

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S    P+   Y   I+ +C+ G++ EA  +   M  +G+ P  ++   +I  Y   G 
Sbjct: 380 MVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREE-------------------------- 394
            + A + L +M   G DP   +Y+ LI   ++EE                          
Sbjct: 440 LNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVW 499

Query: 395 ---NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
                + A  L  KM   G  P++ TY  ++ G C+ GR+  ++ +   M E+G++P  +
Sbjct: 500 KMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEA 559

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            Y +L+N         +A R    M++ G +P
Sbjct: 560 IYNSLLNCCCELGIYGDAVRLVGAMMEHGHLP 591



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 241/480 (50%), Gaps = 10/480 (2%)

Query: 1   MVNALCK---------DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQ 51
           MVN  CK         ++ ++SA      M +KG   + V+Y  LI+  C  G ++E   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 52  LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC 111
           +   M      P V TY  +++ L + GR   A  +  EM + G  P+  TY  ++   C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           ++  + E   I  EM  +G+ P + +++ LI  + + G ++ A      M S    P+  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            Y  +I G+CR   V  A+ +  +MLE      VVTYN++++G C+   L  A  L N M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
            E GV PD +T++  I   CK G + +A  LF+ + +K IK + V Y  LIDG+CK G+M
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           + AN L   M++    PN  +Y  LI+G C    V EA  L   M+ KG+K T+ +   +
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I    + GD   A   L +MVS G  PD   Y   I+ F    N+ +A  ++S M  +G+
Sbjct: 361 IVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGV 420

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           +PD +TY +++  +   G ++ +  +L RM + G +P   TY+ LI  H+ +  L + ++
Sbjct: 421 MPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIK-HLLKEELTKKYK 479



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 251/515 (48%), Gaps = 29/515 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+NA+CK+ K++  +  L EM +KG+ P   TYN LI+ YC+EG +E A ++++ M    
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN LI G C+K    RA  +L +ML+  L+P   TYN+L+   C+   +  A 
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+  GV PD  ++S  I    + G+++ A + F  +K  G+  + V+YT +I+GY
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A  + D ML + C+ +  TYN +++GLC+ + + EA  L   M+++G+    
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTV 354

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI    K+G+ + A  + D M     +PD+  Y   I  FC  G +++A  + + 
Sbjct: 355 PTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSM 414

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK------- 353
           M  R + P+ ++Y ++I+ Y  +G +  AF +   M   G  P+  + + +IK       
Sbjct: 415 MFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEEL 474

Query: 354 -------GYCRS---------GDASK------ADEFLSKMVSEGVDPDSISYNTLINGFV 391
                    C S          D  K      A E   KM+  G  P+  +Y  LI G  
Sbjct: 475 TKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLC 534

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   +  A  L   M  +G+ P    YN +L   C  G   D+  ++  M+E G  P   
Sbjct: 535 KVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLE 594

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +   L  G   + + ++A      +LQ G+  D+ 
Sbjct: 595 SLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEV 629



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 228/460 (49%), Gaps = 15/460 (3%)

Query: 36  LINAYCREGFLEEA---------FQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE 86
           ++N YC+ G L EA         F + N M  KG +    +Y +LI+GLC+ GR D    
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 87  VLDEMLQMGLSPDTATYNTL---LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           +  +M +    P   TY  +   L ES R+    EA  +F EM  RG  P+I +++ +I 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRR---MEAINLFSEMRERGCEPNIHTYTVMIN 117

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
              +  +L+       EM   GLVP    Y  +I+GYC+ G V  A ++ D M    C  
Sbjct: 118 AMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNP 177

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +  TYN ++ G CR K +  A  L ++MLE  + P   T+ +LIHG CK G ++ A  L 
Sbjct: 178 NERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLL 237

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           ++M +  + PD  TY+  ID  CK G +E+AN L+  +  + I  N + Y  LI+GYC  
Sbjct: 238 NLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKA 297

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G + +A  L   M+ +   P   + N +I G C+     +A   +  M+ +G+     +Y
Sbjct: 298 GKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTY 357

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
             LI   ++E + D A  ++ +M + G  PDV  Y   +  FC +G + ++E ++  M E
Sbjct: 358 TILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE 417

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +G+ PD  TYT +I+ +     L  AF     M   G  P
Sbjct: 418 RGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDP 457



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 215/454 (47%), Gaps = 29/454 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +DSA   L  M + GV PD  TY+  I+  C++G +EEA  L NS+  KG
Sbjct: 220 LIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG 279

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y +LI+G CK G+ D A  +LD ML     P+++TYN L+   C++  + EA 
Sbjct: 280 IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEAL 339

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M ++G+   + +++ LI    + G  D A     +M S+G  PD  +YT  I+ +
Sbjct: 340 LLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAF 399

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA  M   M E+G + D +TY  +++      +L  A D+   M + G  P  
Sbjct: 400 CTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSH 459

Query: 241 YTFTTLIHGHCKDGNMNK-----------------------------ALNLFDIMTQKSI 271
           +T++ LI    K+    K                             AL LF+ M +   
Sbjct: 460 HTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGC 519

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P+I TY  LI G CKVG +  A KL+  M  R +SP+   Y  L+N  C +G   +A R
Sbjct: 520 SPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVR 579

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L   M+  G  P L S N +  G    G   KA    S ++  G + D +++  LI+G +
Sbjct: 580 LVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLL 639

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +    D    L+  ME +G      TY +++ G 
Sbjct: 640 KNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 173/320 (54%), Gaps = 9/320 (2%)

Query: 176 IINGYCRNGFVLEA---------LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
           ++NGYC+ G ++EA           + + M +KGC  + V+Y  +++GLC    + E  +
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           +F +M E   +P   T+T ++H   + G   +A+NLF  M ++  +P+I TY  +I+  C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K  ++E+  ++  +M+ + + P+  +Y  LI+GYC  G V  A  +   M      P   
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + N +I G+CR  +  +A   LSKM+   + P  ++YN+LI+G  +   +D A+ L++ M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
              G+VPD  TY+V +   C++GR+ ++ ++   + EKG+  +   YT LI+G+     +
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 467 KEAFRFHDEMLQRGFVPDDA 486
            +A    D ML    +P+ +
Sbjct: 301 DDANSLLDRMLTEDCLPNSS 320


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 156/516 (30%), Positives = 262/516 (50%), Gaps = 33/516 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +++ A+    EM  + + P  +TYNTLI+ YC+ G  E++F++   M    
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + T+N+L+ GL K G  + A+ VL EM  +G  PD  T++ L       E    A 
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++      GV  +  + S L+    + G++++A        + GLVP+ V+Y  +I+GY
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399

Query: 181 CRNGFVLEALKMRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           CR G ++ A +M+ E +EK G   D + YN ++   C    +  A+   N+M  +GV P 
Sbjct: 400 CRKGDLVGA-RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  LI G+ +    +K  ++   M      P++V+Y TLI+  CK  ++ +A  +  
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM  R +SP    Y +LI+G CS G + +AFR   EM+ KGI+  LV+ NT+I G   +G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG--------- 410
             S+A++ L ++  +G+ PD  +YN+LI+G+    N+ +  AL  +M+  G         
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638

Query: 411 ----------------------LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
                                 L PD++ YN +L  +   G M  +  +  +MIEK +  
Sbjct: 639 LLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D++TY +LI G +    L E     DEM  R   P+
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 236/456 (51%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    Y   I A  +   + +  +L N M    + P VF YN LI+GLCK  R + A+++
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            DEML   L P   TYNTL+   C+  N  ++ ++   M    + P +++F+TL+    +
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G ++ A    +EMK  G VPD   ++I+ +GY  N     AL + +  ++ G  M+  T
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
            + +LN LC+   + +A+++    + +G+ P+   + T+I G+C+ G++  A    + M 
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME 416

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ +KPD + YN LI  FC++GEME A K    M  + +SP+  +Y ILI GY       
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           + F +  EM   G  P +VS  T+I   C+     +A      M   GV P    YN LI
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G   +  ++ AF    +M  +G+  +++TYN ++ G    G++ ++E +L  +  KGL 
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           PD  TY +LI+G+    N++     ++EM + G  P
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 245/441 (55%), Gaps = 4/441 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NALCK+ KI+ A+  L     KG+ P+ V YNT+I+ YCR+G L  A   + +M  +G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP    YN LI   C+ G  + A++ +++M   G+SP   TYN L+    RK    +  
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  EM   G  P++VS+ TLI    +  +L  A +  R+M+  G+ P   +Y ++I+G 
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + +A +   EML+KG  +++VTYNT+++GL     L+EA+DL  E+  +G+ PD 
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +LI G+   GN+ + + L++ M +  IKP + TY+ LI   C    +E   +L+ +
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGE 658

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + P+ + Y  +++ Y   G + +AF L  +M+ K I     + N++I G  + G 
Sbjct: 659 M---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +    + +M +  ++P++ +YN ++ G    ++   A+    +M+ +G + DV   N 
Sbjct: 716 LCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNE 775

Query: 421 ILTGFCRQGRMHDSELILWRM 441
           +++G   + R  ++E+++  M
Sbjct: 776 LVSGLKEEWRSKEAEIVISEM 796



 Score =  240 bits (613), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 250/485 (51%), Gaps = 6/485 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K   ++ A+  L EM+  G  PD  T++ L + Y      E A  +  +    G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K   +T + L+N LCK+G+ ++A+E+L   +  GL P+   YNT++   CRK ++  A 
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M ++G+ PD ++++ LI  F   G+++ A     +MK  G+ P    Y I+I GY
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R     +   +  EM + G + +VV+Y T++N LC+   L EA  +  +M +RGV P  
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LI G C  G +  A      M +K I+ ++VTYNTLIDG    G++ +A  L  +
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + + P+  +Y  LI+GY   G+V     L+ EM   GIKPTL + + +I    + G 
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649

Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
                E   ++  E  + PD + YN +++ +    +M+KAF L  +M  + +  D  TYN
Sbjct: 650 -----ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G  + G++ +   ++  M  + + P+  TY  ++ GH    +   A+ ++ EM ++
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764

Query: 480 GFVPD 484
           GF+ D
Sbjct: 765 GFLLD 769



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 233/436 (53%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           + EA  L  ++  +G+ P   +   L++ L K  +      V   +L+    P    Y  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
            +  + +  ++ +  E+F  M    + P +  ++ LI    +  +++ A   F EM +  
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           L+P  + Y  +I+GYC+ G   ++ K+R+ M        ++T+NT+L GL +A M+ +A+
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           ++  EM + G  PD +TF+ L  G+  +     AL +++      +K +  T + L++  
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK G++EKA ++    +++ + PN + Y  +I+GYC  G +  A      M  +G+KP  
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++ N +I+ +C  G+   A++ ++KM  +GV P   +YN LI G+ R+   DK F ++ +
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ME+ G +P+V++Y  ++   C+  ++ +++++   M ++G++P    Y  LI+G  S+  
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544

Query: 466 LKEAFRFHDEMLQRGF 481
           +++AFRF  EML++G 
Sbjct: 545 IEDAFRFSKEMLKKGI 560



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 236/473 (49%), Gaps = 1/473 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           ++A +F   +  +G+YP + +   L++   +         +  ++     +P  F Y   
Sbjct: 127 EAADLFFA-LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I    K     +  E+ + M    + P    YN L+   C+ + M++AE++F EM  R +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P +++++TLI  + + G  +++      MK+  + P  + +  ++ G  + G V +A  
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  EM + G V D  T++ + +G    +    A  ++   ++ GV  + YT + L++  C
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K+G + KA  +      K + P+ V YNT+IDG+C+ G++  A      M  + + P+++
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  LI  +C +G +  A +   +M  KG+ P++ + N +I GY R  +  K  + L +M
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
              G  P+ +SY TLIN   +   + +A  +   ME++G+ P V  YN+++ G C +G++
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D+      M++KG+  +  TY TLI+G      L EA     E+ ++G  PD
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 188/369 (50%)

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +SEA ++F  +   G+ P   S + L+    +  Q    +  F  +  +   P   +Y  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
            I    +   V + L++ + M        V  YN +++GLC+ K + +A+ LF+EML R 
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P   T+ TLI G+CK GN  K+  + + M    I+P ++T+NTL+ G  K G +E A 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            +  +M      P+  ++ IL +GY S      A  ++   V  G+K    +C+ ++   
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+ G   KA+E L + +++G+ P+ + YNT+I+G+ R+ ++  A   +  ME QG+ PD 
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           + YN ++  FC  G M ++E  + +M  KG++P   TY  LI G+  +    + F    E
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484

Query: 476 MLQRGFVPD 484
           M   G +P+
Sbjct: 485 MEDNGTMPN 493



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 152/305 (49%), Gaps = 35/305 (11%)

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           L  +KM++EA DLF  +   G++P   + T L+    K       +N+F  + +   +P 
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
              Y   I    K+ ++ K  +L+  M   +I P+   Y +LI+G C    + +A +L+ 
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM+ + + P+L++ NT+I GYC++G+  K+ +   +M ++ ++P  I++NTL+ G  +  
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGF----------------------------- 425
            ++ A  ++ +M++ G VPD  T++++  G+                             
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358

Query: 426 ------CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
                 C++G++  +E IL R + KGL P+   Y T+I+G+  + +L  A    + M ++
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418

Query: 480 GFVPD 484
           G  PD
Sbjct: 419 GMKPD 423


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 153/465 (32%), Positives = 242/465 (52%), Gaps = 4/465 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           ++ Q G+ PDTVTYNT+I +YC+EG L  A +    +   GL+P  FT N+L+ G C+ G
Sbjct: 173 QLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTG 232

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +A  +   M  MG   +  +Y  L+   C  + + EA  +F  M R G +P++ +F+
Sbjct: 233 ELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFT 292

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI    ++G++  A + F  M   G+VP  + Y  +I GY + G + +ALK+++ M + 
Sbjct: 293 FLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKN 352

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           GC  D  TYNT++ GLC  K   EA++L N  ++ G  P   TFT LI+G+C     + A
Sbjct: 353 GCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 411

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L + + M     K D+  +  LI+   K   +++A +L  ++ +  + PN I+Y  +I+G
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 471

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           YC  G V  A  +   M   G +P   + N+++ G  +     KA   L+KM  +G+ P+
Sbjct: 472 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 531

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y TL+ G   E + D AF L   ME  GL PD   Y V+    C+ GR  ++   + 
Sbjct: 532 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV 591

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           R   KG+   +  YTTLI+G     N   A    + M+  G  PD
Sbjct: 592 R---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 633



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 249/499 (49%), Gaps = 19/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   K D A     +M       D   +  LIN+  ++  L+EA +L+N +S  G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY S+I+G CK G+ D A EVL  M + G  P+  TYN+L+    + + + +A 
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 517

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M + G+ P++++++TL+         D A   F  M+  GL PD   Y ++ +  
Sbjct: 518 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   EA      ++ KG  +  V Y T+++G  +A     A  L   M++ G  PD 
Sbjct: 578 CKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT++ L+H  CK   +N+AL + D M+ + IK  I  Y  LID   + G+ + A +++ +
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    P+  +Y + IN YC  G + +A  L  +M  +G+ P +V+ N +I G    G 
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLIN-------GFVREEN---------MDKAFALVS 404
             +A   L +MV    +P+  +Y  L+         +VR  +         +D  + L+ 
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 814

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M   GL P V TY+ ++ GFC+ GR+ ++ L+L  M  KGL+P+   YT LI       
Sbjct: 815 RMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTK 874

Query: 465 NLKEAFRFHDEMLQRGFVP 483
             ++A  F   M + GF P
Sbjct: 875 FFEKALSFVSIMSECGFQP 893



 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 162/568 (28%), Positives = 262/568 (46%), Gaps = 84/568 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  A++    M Q GV P  +TYN +I  Y + G + +A ++   M   G
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 353

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +TYN+LI GLC + + + A+E+L+  ++ G +P   T+  L+   C  E   +A 
Sbjct: 354 CHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M       D+  F  LI    +  +L  A     E+ + GLVP+ + YT II+GY
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V  AL++   M   GC  +  TYN+++ GL + K L +A  L  +M + G+ P+ 
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD-------------------------- 274
            T+TTL+ G C + + + A  LF++M Q  +KPD                          
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 592

Query: 275 ------IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                  V Y TLIDGF K G  + A  L   MI    +P+  +Y +L++  C    + E
Sbjct: 593 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNE 652

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +  +M  +GIK T+ +   +I    R G    A    ++M S G  P + +Y   IN
Sbjct: 653 ALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFIN 712

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS-------------- 434
            + +E  ++ A  L+ KME +G+ PDV+TYN+++ G    G +  +              
Sbjct: 713 SYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 772

Query: 435 --------------------------------EL-ILW----RMIEKGLNPDRSTYTTLI 457
                                           EL I W    RM++ GLNP  +TY++LI
Sbjct: 773 NYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 832

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            G      L+EA    D M  +G  P++
Sbjct: 833 AGFCKAGRLEEACLLLDHMCGKGLSPNE 860



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 157/519 (30%), Positives = 252/519 (48%), Gaps = 41/519 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFL-------------- 46
           M+ + CK+  + +A      + + G+ P+T T N L+  YCR G L              
Sbjct: 189 MIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248

Query: 47  ---------------------EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                                 EA  L   M   G  P V  +  LI+GLCK GR   A+
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GI 144
            + D M Q G+ P   TYN ++V   +   M++A +I   M + G  PD  +++TLI G+
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             +  +    L+        G  P  V +T +INGYC      +AL+M+++M+   C +D
Sbjct: 369 CDQKTEEAEELL--NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +  +  ++N L +   L EA +L NE+   G+ P+  T+T++I G+CK G ++ AL +  
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 486

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M +   +P+  TYN+L+ G  K  ++ KA  L   M    I PN I+Y  L+ G C   
Sbjct: 487 MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 546

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               AFRL+  M   G+KP   +   +    C++G A +A  F+   V +GV    + Y 
Sbjct: 547 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYT 603

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI+GF +  N D A  L+ +M ++G  PD  TY+V+L   C+Q R++++  IL +M  +
Sbjct: 604 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+      YT LI+  + +     A R ++EM   G  P
Sbjct: 664 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKP 702



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 252/484 (52%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+   +  A +    M++ G  P+   +  LI+  C+ G + +A  L ++M   G
Sbjct: 259 LIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNG 318

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN++I G  K GR + A ++ + M + G  PD  TYNTL+   C ++   EAE
Sbjct: 319 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAE 377

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+     + G  P +V+F+ LI  +    + D AL    +M S+    D  ++  +IN  
Sbjct: 378 ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 437

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + EA ++ +E+   G V +V+TY +I++G C++  +  A ++   M   G  P+ 
Sbjct: 438 IKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNA 497

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +L++G  KD  ++KA+ L   M +  I P+++TY TL+ G C   + + A +L+  
Sbjct: 498 WTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM 557

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + P+  +Y +L +  C  G   EA+     +V KG+  T V   T+I G+ ++G+
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGN 614

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   + +M+ EG  PDS +Y+ L++   +++ +++A  ++ +M  +G+   +  Y +
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    R+G+   ++ +   M   G  P  +TYT  IN +  +  L++A     +M + G
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734

Query: 481 FVPD 484
             PD
Sbjct: 735 VAPD 738



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 250/527 (47%), Gaps = 48/527 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+L K  ++  AK  L E+   G+ P+ +TY ++I+ YC+ G ++ A +++  M   G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM---- 116
            +P  +TYNSL+ GL K  +  +A  +L +M + G+ P+  TY TLL   C + +     
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 117 ----------------------------SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
                                         AEE +  + R+GVA   V ++TLI  FS+ 
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 612

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G  D A      M   G  PD+  Y+++++  C+   + EAL + D+M  +G    +  Y
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
             +++ + R      A  ++NEM   G  P   T+T  I+ +CK+G +  A +L   M +
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI----------- 317
           + + PD+VTYN LIDG   +G +++A      M+     PNY +Y +L+           
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792

Query: 318 -----NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
                +G  ++  +   ++L   MV  G+ PT+ + +++I G+C++G   +A   L  M 
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 852

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            +G+ P+   Y  LI      +  +KA + VS M   G  P + +Y +++ G C +G   
Sbjct: 853 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFE 912

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             + +   ++E G N D   +  L +G +    +   F+    M +R
Sbjct: 913 KVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 226/441 (51%), Gaps = 3/441 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN  + +  R    E   ++ + +   GL P   TYN++I   CK+G    A      +L
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           + GL P+T T N L++  CR   + +A  +F  M   G   +  S++ LI        + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            AL+ F  MK  G  P+   +T +I+G C++G V +A  + D M + G V  V+TYN ++
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            G  +   + +A  +   M + G  PD +T+ TLI+G C D    +A  L +   ++   
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFT 389

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P +VT+  LI+G+C   + + A ++   M+S K   +   +G LIN       + EA  L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             E+   G+ P +++  +II GYC+SG    A E L  M  +G  P++ +YN+L+ G V+
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-GLNPDRS 451
           ++ + KA AL++KM+  G++P+VITY  +L G C +    D+   L+ M+E+ GL PD  
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDF-DNAFRLFEMMEQNGLKPDEH 568

Query: 452 TYTTLINGHVSQNNLKEAFRF 472
            Y  L +        +EA+ F
Sbjct: 569 AYAVLTDALCKAGRAEEAYSF 589



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 222/438 (50%), Gaps = 1/438 (0%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           +A Q +       L      YN  +  L +    +    V  +++Q GL PDT TYNT++
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
              C++ +++ A   F  +   G+ P+  + + L+  + R G+L +A   F  M   G  
Sbjct: 191 KSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
            +   YTI+I G C    V EAL +   M   GC  +V  +  +++GLC++  + +A  L
Sbjct: 251 RNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           F+ M + GV P   T+  +I G+ K G MN AL + ++M +    PD  TYNTLI G C 
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 370

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
             + E+A +L  + +    +P  +++  LINGYC      +A R+  +M+    K  L  
Sbjct: 371 -QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              +I    +     +A E L+++ + G+ P+ I+Y ++I+G+ +   +D A  ++  ME
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             G  P+  TYN ++ G  +  ++H +  +L +M + G+ P+  TYTTL+ G   +++  
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 468 EAFRFHDEMLQRGFVPDD 485
            AFR  + M Q G  PD+
Sbjct: 550 NAFRLFEMMEQNGLKPDE 567



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 212/470 (45%), Gaps = 50/470 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L KD K+  A   L +M++ G+ P+ +TY TL+   C E   + AF+L   M   G
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 562

Query: 61  LKPGVFTYNSLINGLCKKGRC--------------------------------DRAKEVL 88
           LKP    Y  L + LCK GR                                 D A  ++
Sbjct: 563 LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 622

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           + M+  G +PD+ TY+ LL   C+++ ++EA  I  +MS RG+   I +++ LI    R 
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+ D A   + EM S+G  P    YT+ IN YC+ G + +A  +  +M  +G   DVVTY
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM------------ 256
           N +++G      +  A      M+     P+++T+  L+  H   GN+            
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK-HLLKGNLAYVRSVDTSGMW 801

Query: 257 -----NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
                +    L + M +  + P + TY++LI GFCK G +E+A  L   M  + +SPN  
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 861

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y +LI   C      +A      M   G +P L S   ++ G C  GD  K       +
Sbjct: 862 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 921

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           +  G + D +++  L +G ++   +D  F ++S ME +       TY ++
Sbjct: 922 LELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 971



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 51/369 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K    D A   +  M  +G  PD+ TY+ L++A C++  L EA  +++ MS +G
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  +F Y  LI+ + ++G+ D AK + +EM   G  P   TY   +   C++  + +AE
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---------------- 164
           ++  +M R GVAPD+V+++ LI      G +DRA    + M  A                
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784

Query: 165 -----------------------------------GLVPDNVLYTIIINGYCRNGFVLEA 189
                                              GL P    Y+ +I G+C+ G + EA
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             + D M  KG   +   Y  ++   C  K   +A    + M E G  P   ++  L+ G
Sbjct: 845 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 904

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C +G+  K  +LF  + +     D V +  L DG  K G ++   ++ + M  R    +
Sbjct: 905 LCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCIS 964

Query: 310 YISYGILIN 318
             +Y ++ N
Sbjct: 965 SQTYALVTN 973



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 56/285 (19%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAF----------- 50
           +N+ CK+ +++ A+  + +ME++GV PD VTYN LI+     G+++ AF           
Sbjct: 711 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASC 770

Query: 51  ----------------------------------------QLMNSMSGKGLKPGVFTYNS 70
                                                   QL+  M   GL P V TY+S
Sbjct: 771 EPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSS 830

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI G CK GR + A  +LD M   GLSP+   Y  L+   C  +   +A      MS  G
Sbjct: 831 LIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECG 890

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P + S+  L+      G  ++    F ++   G   D V + I+ +G  + G+V    
Sbjct: 891 FQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICF 950

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +M   M ++ C +   TY  + N     KM   +  L +E+ E  
Sbjct: 951 QMLSIMEKRYCCISSQTYALVTN-----KMHEVSSSLVSEVREEA 990


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 243/449 (54%), Gaps = 1/449 (0%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           ++  +   G L+EA  ++  M  +GL P   T N +++     G  + A+ +  EM Q G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           +SPD  ++  ++V  C    + EAE     M  RG   D  + + +I  F + G ++R +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            YF +M   GL P+ + +T +ING C+ G + +A ++ +EM+ +G   +V T+ T+++GL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 216 CRAKMLTEADDLFNEMLER-GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           C+     +A  LF +++   G  P+ +T+T +I+G+CK+  +N+A  L   M ++ + P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
             TY TLIDG CKVG   +A +L   M     SPN  +Y  +I+G C  G + EA+RL  
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           ++   G++   V+   ++  +CR  D +++  F +KM+  G  PD  SY TLI+ F R++
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            M ++  L  +  + GL+P   TY  ++ G+CR G    +  +  RM   G  PD  TY 
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            LI+G   ++ L +A   +D M+ +G  P
Sbjct: 580 ALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 250/483 (51%), Gaps = 1/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV    ++ K+  A   + EM+ +G+ P T T N +++     G +E A  +   M  +G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   ++  ++   C  GR   A+  L+ M++ G   D AT   ++   C+K  ++   
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M   G+AP++++F+ LI    + G + +A     EM   G  P+   +T +I+G 
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 181 CRNGFVLEALKMRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G+  +A ++  +++   G   +V TY  ++NG C+   L  A+ L + M E+G+ P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTLI GHCK GN  +A  L D+M ++   P+I TYN +IDG CK G +++A +L  
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    +  + ++Y IL++ +C       +   + +M+  G  P + S  T+I  +CR  
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +++    + VS G+ P   +Y ++I G+ R  N   A  L  +M N G  PD ITY 
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +++G C++ ++ D+  +   M++KGL+P   T  TL   +  +++   A    D + +R
Sbjct: 580 ALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKR 639

Query: 480 GFV 482
            ++
Sbjct: 640 QWI 642



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 247/459 (53%), Gaps = 4/459 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV A C   ++  A+ +L  M ++G   D  T   +I+A+C++G++         M   G
Sbjct: 230 MVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMG 289

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V  + +LINGLCK+G   +A E+L+EM++ G  P+  T+ TL+   C+K    +A 
Sbjct: 290 LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAF 349

Query: 121 EIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +F ++ R  G  P++ +++ +I  + +  +L+RA M    M+  GLVP+   YT +I+G
Sbjct: 350 RLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDG 409

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G  + A ++ D M ++G   ++ TYN I++GLC+   L EA  L N++   G+  D
Sbjct: 410 HCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQAD 469

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T L+  HC+  + N++L  F+ M +    PDI +Y TLI  FC+  +M+++ +L+ 
Sbjct: 470 GVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFE 529

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           + +S  + P   +Y  +I GYC  G+ + A +L+  M   G  P  ++   +I G C+  
Sbjct: 530 EAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKES 589

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A      M+ +G+ P  ++  TL   + ++++   A  ++ ++E +  +    T N
Sbjct: 590 KLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIR---TVN 646

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
            ++   C +G++  + L   ++++K  N +R T    +N
Sbjct: 647 TLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMN 685



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 218/416 (52%), Gaps = 1/416 (0%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           ++    + G+   A  ++ EM   GL P T T N +L  +     +  AE +F EM +RG
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           V+PD VSF  ++      G++  A  +   M   G + DN   T+II+ +C+ G+V   +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
               +M+E G   +V+ +  ++NGLC+   + +A +L  EM+ RG  P+ YT TTLI G 
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 251 CKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           CK G   KA  LF  ++     KP++ TY  +I+G+CK  ++ +A  L + M  + + PN
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y  LI+G+C +G+   A+ L   M  +G  P + + N II G C+ G   +A   L+
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           K+   G+  D ++Y  L++   R+ + +++    +KM   G  PD+ +Y  +++ FCRQ 
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +M +SE +    +  GL P + TYT++I G+    N   A +    M   G  PD 
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDS 575



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 221/410 (53%), Gaps = 8/410 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++N LCK   I  A   L EM ++G  P+  T+ TLI+  C++G+ E+AF+L +  +   
Sbjct: 300 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSD 359

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G KP V TY ++ING CK+ + +RA+ +L  M + GL P+T TY TL+   C+  N   A
Sbjct: 360 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 419

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M + G +P+I +++ +I    + G LD A     ++   GL  D V YTI+++ 
Sbjct: 420 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 479

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR      +L   ++ML+ G   D+ +Y T+++  CR K + E++ LF E +  G+ P 
Sbjct: 480 HCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPT 539

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T++I G+C+ GN + A+ LF  M+     PD +TY  LI G CK  +++ A  L+ 
Sbjct: 540 KKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYD 599

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + +SP  ++   L   YC     + A  +   +  +    T+   NT+++  C  G
Sbjct: 600 AMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NTLVRKLCSEG 656

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
               A  F  K++ +  +P+ ++  TL+ GF+ +      + LVS++  +
Sbjct: 657 KLDMAALFFHKLLDK--EPN-VNRVTLL-GFMNKCYESNKYGLVSELSER 702



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 55/101 (54%)

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           ++  F     + +A  +V +M+NQGLVP   T N +L      G +  +E +   M ++G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           ++PD  ++  ++    +   + EA R+ + M++RGF+ D+A
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNA 260


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 144/478 (30%), Positives = 259/478 (54%), Gaps = 3/478 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K + A   L    +KG  P  V+YN +++   R+G ++EA +    M    + P + TYN
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            +I+ LCK G+ + A  V D M   GL P+  T N ++   C+ + + +A  IF  +  +
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
              PD V++ +LI    R+G++D A   + +M  A  +P+ V+YT +I  + + G   + 
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            K+ +EML  GC  D++  NT ++ + +A  + +   LF E+   G  PD  ++T LIHG
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
             K G  ++A  LF  M ++    D   YNT+IDGFCK G++ KA +L  +M ++   P 
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++YG +I+G   +  + EA+ L+ E   KGI+  +V  +++I G+ + G   +A   + 
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +++ +G+ P+  ++N L++  V+ E + +A      M++    P+ ITY++++ G C+  
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI- 772

Query: 430 RMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           R  +   + W+ ++K G  P+  TYTT+I+G     N+ EA    ++  ++G V D A
Sbjct: 773 RKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSA 830



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 243/454 (53%), Gaps = 4/454 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K+++A +    M+  G++P+ +T N +++  C+   L++A  +   +  K 
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TY SLI GL + GR D A ++ ++ML     P+   Y +L+    +     +  
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ EM R G +PD++  +T +    + G++++    F+E+K+ G +PD   YTI+I+G 
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF  EA ++   M E+GCV+D   YNT+++G C++  + +A  L  EM  +G  P  
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I G  K   +++A  LF+    K I+ ++V Y++LIDGF KVG +++A  +  +
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + ++PN  ++  L++       ++EA   +  M      P  ++ + +I G C+   
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRK 774

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M  +G  P+  +Y T+I+G  +  N+ +A  L  K + +G V D   YN 
Sbjct: 775 FNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA 834

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           I+ G     R  D+    +R+ E+      S YT
Sbjct: 835 IIEGLSNANRASDA----YRLFEEARLKGCSIYT 864



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 241/518 (46%), Gaps = 36/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  + +  K +  +  L EM   G  P   T   ++ ++ +   L EAF  + +M    
Sbjct: 136 LLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLK 195

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P    Y +LI  L      D    +  +M ++G + +   + TL+    R+  +  A 
Sbjct: 196 FRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAAL 255

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM    + PD+V ++  I  F + G++D A  +F EMK+ GLV D+V YT +I   
Sbjct: 256 SLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVL 315

Query: 181 CRNGFVLEALKMRDEM-------------------------------LE----KGCVMDV 205
           C+   + EA+++ + M                               LE    KGC+  V
Sbjct: 316 CKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSV 375

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V+YN IL+ L R   + EA   F EM ++   P+  T+  +I   CK G +  AL + D 
Sbjct: 376 VSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDA 434

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    + P+++T N ++D  CK   ++ A  ++  +  +   P+ ++Y  LI G    G 
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGR 494

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V EA++L+ +M+     P  V   ++I+ + + G      +  ++M+  G  PD +  NT
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
            ++   +   ++K  AL  +++N G +PD  +Y +++ G  + G  H++  + + M E+G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              D   Y T+I+G      + +A++  +EM  +G  P
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEP 652



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 197/434 (45%), Gaps = 35/434 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LCK  ++D A      ++ K   PD VTY +LI    R G ++EA++L   M    
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    Y SLI    K GR +   ++ +EML++G SPD    NT +    +   + +  
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E+   G  PD  S++ LI    + G    A   F  MK  G V D   Y  +I+G+
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE---------- 230
           C++G V +A ++ +EM  KG    VVTY ++++GL +   L EA  LF E          
Sbjct: 630 CKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNV 689

Query: 231 -------------------------MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                    ++++G+ P+ YT+  L+    K   +++AL  F  
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQS 749

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M      P+ +TY+ LI G CK+ +  KA   W +M  +   PN  +Y  +I+G    G+
Sbjct: 750 MKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGN 809

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA  L+ +   KG        N II+G   +  AS A     +   +G    + +   
Sbjct: 810 IVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVV 869

Query: 386 LINGFVREENMDKA 399
           L++   + E +++A
Sbjct: 870 LLDSLHKAECIEQA 883



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 199/418 (47%), Gaps = 1/418 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            YNSL+  + +  + +  +++L+EM   G  P   T   +++   +   + EA      M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            +    P   +++ LIG  S +   D  L  F++M+  G   +  L+T +I  + R G V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL + DEM       DVV YN  ++   +A  +  A   F+EM   G+  D  T+T++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I   CK   +N+A+ LF+ M Q    P    YNT+I G+   G+ E A  L      +  
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ +SY  +++     G V EA + + EM    I P L + N +I   C++G    A  
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M   G+ P+ I+ N +++   + + +D A ++   ++++   PD +TY  ++ G  
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           R GR+ ++  +  +M++    P+   YT+LI         ++  + ++EML+ G  PD
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 61/151 (40%)

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM   G  P+  +C  I+  + +S    +A  F+  M      P   +Y  LI       
Sbjct: 155 EMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSR 214

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           + D    L  +M+  G   +V  +  ++  F R+GR+  +  +L  M    L PD   Y 
Sbjct: 215 DSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYN 274

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             I+       +  A++F  EM   G V DD
Sbjct: 275 VCIDCFGKAGKVDMAWKFFHEMKANGLVLDD 305


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 144/478 (30%), Positives = 259/478 (54%), Gaps = 3/478 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K + A   L    +KG  P  V+YN +++   R+G ++EA +    M    + P + TYN
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            +I+ LCK G+ + A  V D M   GL P+  T N ++   C+ + + +A  IF  +  +
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
              PD V++ +LI    R+G++D A   + +M  A  +P+ V+YT +I  + + G   + 
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            K+ +EML  GC  D++  NT ++ + +A  + +   LF E+   G  PD  ++T LIHG
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
             K G  ++A  LF  M ++    D   YNT+IDGFCK G++ KA +L  +M ++   P 
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++YG +I+G   +  + EA+ L+ E   KGI+  +V  +++I G+ + G   +A   + 
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +++ +G+ P+  ++N L++  V+ E + +A      M++    P+ ITY++++ G C+  
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI- 772

Query: 430 RMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           R  +   + W+ ++K G  P+  TYTT+I+G     N+ EA    ++  ++G V D A
Sbjct: 773 RKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSA 830



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 243/454 (53%), Gaps = 4/454 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK  K+++A +    M+  G++P+ +T N +++  C+   L++A  +   +  K 
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TY SLI GL + GR D A ++ ++ML     P+   Y +L+    +     +  
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ EM R G +PD++  +T +    + G++++    F+E+K+ G +PD   YTI+I+G 
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF  EA ++   M E+GCV+D   YNT+++G C++  + +A  L  EM  +G  P  
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I G  K   +++A  LF+    K I+ ++V Y++LIDGF KVG +++A  +  +
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + ++PN  ++  L++       ++EA   +  M      P  ++ + +I G C+   
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRK 774

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M  +G  P+  +Y T+I+G  +  N+ +A  L  K + +G V D   YN 
Sbjct: 775 FNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA 834

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           I+ G     R  D+    +R+ E+      S YT
Sbjct: 835 IIEGLSNANRASDA----YRLFEEARLKGCSIYT 864



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 240/518 (46%), Gaps = 36/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  + +  K +  +  L EM   G  P   T   ++ ++ +   L EAF  + +M    
Sbjct: 136 LLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLK 195

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P    Y +LI  L      D    +  +M ++G + +   + TL+    R+  +  A 
Sbjct: 196 FRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAAL 255

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM    + PD+V ++  I  F + G++D A   F EMK+ GLV D+V YT +I   
Sbjct: 256 SLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVL 315

Query: 181 CRNGFVLEALKMRDEM-------------------------------LE----KGCVMDV 205
           C+   + EA+++ + M                               LE    KGC+  V
Sbjct: 316 CKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSV 375

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V+YN IL+ L R   + EA   F EM ++   P+  T+  +I   CK G +  AL + D 
Sbjct: 376 VSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDA 434

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    + P+++T N ++D  CK   ++ A  ++  +  +   P+ ++Y  LI G    G 
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGR 494

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V EA++L+ +M+     P  V   ++I+ + + G      +  ++M+  G  PD +  NT
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
            ++   +   ++K  AL  +++N G +PD  +Y +++ G  + G  H++  + + M E+G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              D   Y T+I+G      + +A++  +EM  +G  P
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEP 652



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 197/434 (45%), Gaps = 35/434 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LCK  ++D A      ++ K   PD VTY +LI    R G ++EA++L   M    
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    Y SLI    K GR +   ++ +EML++G SPD    NT +    +   + +  
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E+   G  PD  S++ LI    + G    A   F  MK  G V D   Y  +I+G+
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE---------- 230
           C++G V +A ++ +EM  KG    VVTY ++++GL +   L EA  LF E          
Sbjct: 630 CKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNV 689

Query: 231 -------------------------MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                    ++++G+ P+ YT+  L+    K   +++AL  F  
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQS 749

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M      P+ +TY+ LI G CK+ +  KA   W +M  +   PN  +Y  +I+G    G+
Sbjct: 750 MKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGN 809

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA  L+ +   KG        N II+G   +  AS A     +   +G    + +   
Sbjct: 810 IVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVV 869

Query: 386 LINGFVREENMDKA 399
           L++   + E +++A
Sbjct: 870 LLDSLHKAECIEQA 883



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 199/418 (47%), Gaps = 1/418 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            YNSL+  + +  + +  +++L+EM   G  P   T   +++   +   + EA      M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            +    P   +++ LIG  S +   D  L  F++M+  G   +  L+T +I  + R G V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL + DEM       DVV YN  ++   +A  +  A   F+EM   G+  D  T+T++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I   CK   +N+A+ LF+ M Q    P    YNT+I G+   G+ E A  L      +  
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ +SY  +++     G V EA + + EM    I P L + N +I   C++G    A  
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M   G+ P+ I+ N +++   + + +D A ++   ++++   PD +TY  ++ G  
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           R GR+ ++  +  +M++    P+   YT+LI         ++  + ++EML+ G  PD
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 60/151 (39%)

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM   G  P+  +C  I+  + +S    +A  F+  M      P   +Y  LI       
Sbjct: 155 EMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSR 214

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           + D    L  +M+  G   +V  +  ++  F R+GR+  +  +L  M    L PD   Y 
Sbjct: 215 DSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYN 274

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             I+       +  A++   EM   G V DD
Sbjct: 275 VCIDCFGKAGKVDMAWKXFHEMKANGLVLDD 305


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 243/454 (53%), Gaps = 6/454 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSG---KGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           ++N+++N   +EG    AF+    + G   KG +P + TYN +I  LCK G+ DRA +  
Sbjct: 138 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 197

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            EM     +PD  TY+TL+   C++  + EA  +  EM   G  P+ V+F+ LI   S+N
Sbjct: 198 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 257

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L RA      M   G VP+ V Y  +I+G C  G + +AL + ++M+   CV + VTY
Sbjct: 258 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 317

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
            TI+NGL + +   +   +   M ERG   + Y +++LI G  K+G    A+ L+  M +
Sbjct: 318 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 377

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K  KP++V Y   IDG C+  + ++A  +  +M+S+   PN  +Y  L+ G+   G   +
Sbjct: 378 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 437

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +W EM+ + ++  +V C+ ++ G C SG   +A    + M+ EG+ PD ++Y+++I 
Sbjct: 438 AILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIK 497

Query: 389 GFVREENMDKAFALVSKMENQ--GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           G     ++DK   L  +M+ Q     PDV+TYN++    CRQ  +  +  +L  M+++G 
Sbjct: 498 GLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGC 557

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFR-FHDEMLQR 479
           +PD  T    +     + N  +  R F DE++ R
Sbjct: 558 DPDSLTCNIFLETLRERINPPQDGRLFLDELVVR 591



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 246/469 (52%), Gaps = 23/469 (4%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           KG  P+ +TYN +I A C+ G ++ A      M  K   P VFTY++L+NGLCK+ R D 
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A  +LDEM   G  P+  T+N L+    +  ++S A ++   M  +G  P+ V+++TLI 
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 287

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
                G+LD+AL    +M S+  VP+ V Y  IING  +     + + +   M E+G   
Sbjct: 288 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 347

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +   Y+++++GL +      A  L+ EM E+G  P+   +   I G C+D   ++A ++ 
Sbjct: 348 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 407

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M  K   P+  TY++L+ GF K G+ +KA  +W +M+S+ +  N +   +L+NG C  
Sbjct: 408 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 467

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSI 381
           G + EA  +W  M+G+G+KP +V+ +++IKG C  G   K  +   +M  +     PD +
Sbjct: 468 GRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVV 527

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF------CRQGRMHDSE 435
           +YN L N   R++N+ +A  L++ M ++G  PD +T N+ L          + GR+   E
Sbjct: 528 TYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDE 587

Query: 436 LIL-----------WRMIE----KGLNPDRSTYTTLINGHVSQNNLKEA 469
           L++            R++E    + L P+ ST++ +I        ++E 
Sbjct: 588 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 636



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 238/457 (52%), Gaps = 23/457 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK  +ID A     EM  K   PD  TY+TL+N  C+E  ++EA  L++ M  +G
Sbjct: 180 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 239

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+N LI+ L K G   RA +++D M   G  P+  TYNTL+   C K  + +A 
Sbjct: 240 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 299

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M      P+ V++ T+I    +  + +  +     M+  G   +  +Y+ +I+G 
Sbjct: 300 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 359

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A+++  EM EKGC  +VV Y   ++GLCR +   EA+D+  EML +G  P+ 
Sbjct: 360 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 419

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++L+ G  K G+  KA+ ++  M  + ++ ++V  + L++G C+ G + +A  +W  
Sbjct: 420 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 479

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK--PTLVSCNTIIKGYCRS 358
           M+   + P+ ++Y  +I G C +G V +  +L+YEM  +  K  P +V+ N +    CR 
Sbjct: 480 MLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQ 539

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNT---------------------LINGFVREENMD 397
            + ++A + L+ M+ EG DPDS++ N                      L+   ++ E   
Sbjct: 540 DNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKL 599

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
            A  +V +M  + L P+  T++ ++   C+  R+ ++
Sbjct: 600 SALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 636



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 220/455 (48%), Gaps = 41/455 (9%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS-EAE 120
           K G  T+  LI             +VLD M + G    T T   L+ ++C K ++  EA 
Sbjct: 62  KLGDATFYRLIENYATSREFHFIHQVLDRMKREG-RVLTETIFILIFKACGKAHLPGEAV 120

Query: 121 EIFCEMSRRGVAPDIV-SFSTLIGIFSRNGQLDRALMYFREM---KSAGLVPDNVLYTII 176
             F  M+        V SF++++ +  + G    A  ++  +    S G  P+ + Y +I
Sbjct: 121 NFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLI 180

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I   C+ G +  A+    EM  K C  DV TY+T++NGLC+ + + EA  L +EM   G 
Sbjct: 181 IKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGC 240

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+  TF  LI    K+G++++A  L D M  K   P+ VTYNTLI G C  G+++KA  
Sbjct: 241 LPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALS 300

Query: 297 LWADMISRKISPNYISYGILING----------------------------YCSM----- 323
           L   M+S K  PN ++YG +ING                            Y S+     
Sbjct: 301 LLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLF 360

Query: 324 --GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G    A RLW EM  KG KP +V     I G CR     +A++ L +M+S+G  P++ 
Sbjct: 361 KEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAF 420

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y++L+ GF ++ +  KA  +  +M +Q +  +V+  +V+L G C  GR+ ++  +   M
Sbjct: 421 TYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHM 480

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           + +GL PD   Y+++I G     ++ +  +   EM
Sbjct: 481 LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 191/393 (48%), Gaps = 37/393 (9%)

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           +G  P++++++ +I    + GQ+DRA+  FREM      PD   Y+ ++NG C+   V E
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A+ + DEM  +GC+ + VT+N +++ L +   L+ A  L + M  +G  P+  T+ TLIH
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 287

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G C  G ++KAL+L + M      P+ VTY T+I+G  K    E    +   M  R    
Sbjct: 288 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 347

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N   Y  LI+G    G    A RLW EM  KG KP +V     I G CR     +A++ L
Sbjct: 348 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 407

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M+S+G  P++ +Y++L+ GF ++ +  KA  +  +M +Q +  +V+  +V+L G C  
Sbjct: 408 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 467

Query: 429 GRMHDSELILWRMIEKGLNPDRS------------------------------------- 451
           GR+ ++  +   M+ +GL PD                                       
Sbjct: 468 GRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVV 527

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TY  L N    Q+NL  A    + ML  G  PD
Sbjct: 528 TYNILFNALCRQDNLTRAIDLLNSMLDEGCDPD 560



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 5/177 (2%)

Query: 315 ILINGYCSMGHVT-EAFRLWYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           ILI   C   H+  EA   ++ M      K T+ S N+++    + GD S A +F   + 
Sbjct: 104 ILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVF 163

Query: 373 ---SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
              S+G  P+ ++YN +I    +   +D+A     +M  +   PDV TY+ ++ G C++ 
Sbjct: 164 GANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKER 223

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           R+ ++  +L  M  +G  P+  T+  LI+      +L  A +  D M  +G VP++ 
Sbjct: 224 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEV 280



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 23/147 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEME--QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           M+  LC    +D       EM+  +    PD VTYN L NA CR+  L  A  L+NSM  
Sbjct: 495 MIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLD 554

Query: 59  KGLKPGVFTYN---------------------SLINGLCKKGRCDRAKEVLDEMLQMGLS 97
           +G  P   T N                      L+  L K+ R   A  +++EML   L 
Sbjct: 555 EGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLP 614

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFC 124
           P+ +T++ ++  +C+ + + E  +  C
Sbjct: 615 PEPSTWSRVIQRTCKPKRIRETIDECC 641


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 243/454 (53%), Gaps = 6/454 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSG---KGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           ++N+++N   +EG    AF+    + G   KG +P + TYN +I  LCK G+ DRA +  
Sbjct: 162 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 221

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            EM     +PD  TY+TL+   C++  + EA  +  EM   G  P+ V+F+ LI   S+N
Sbjct: 222 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 281

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L RA      M   G VP+ V Y  +I+G C  G + +AL + ++M+   CV + VTY
Sbjct: 282 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 341

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
            TI+NGL + +   +   +   M ERG   + Y +++LI G  K+G    A+ L+  M +
Sbjct: 342 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 401

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K  KP++V Y   IDG C+  + ++A  +  +M+S+   PN  +Y  L+ G+   G   +
Sbjct: 402 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 461

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +W EM+ + ++  +V C+ ++ G C SG   +A    + M+ EG+ PD ++Y+++I 
Sbjct: 462 AILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIK 521

Query: 389 GFVREENMDKAFALVSKMENQ--GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           G     ++DK   L  +M+ Q     PDV+TYN++    CRQ  +  +  +L  M+++G 
Sbjct: 522 GLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGC 581

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFR-FHDEMLQR 479
           +PD  T    +     + N  +  R F DE++ R
Sbjct: 582 DPDSLTCNIFLETLRERINPPQDGRLFLDELVVR 615



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 246/469 (52%), Gaps = 23/469 (4%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           KG  P+ +TYN +I A C+ G ++ A      M  K   P VFTY++L+NGLCK+ R D 
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A  +LDEM   G  P+  T+N L+    +  ++S A ++   M  +G  P+ V+++TLI 
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 311

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
                G+LD+AL    +M S+  VP+ V Y  IING  +     + + +   M E+G   
Sbjct: 312 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 371

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +   Y+++++GL +      A  L+ EM E+G  P+   +   I G C+D   ++A ++ 
Sbjct: 372 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 431

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M  K   P+  TY++L+ GF K G+ +KA  +W +M+S+ +  N +   +L+NG C  
Sbjct: 432 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 491

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSI 381
           G + EA  +W  M+G+G+KP +V+ +++IKG C  G   K  +   +M  +     PD +
Sbjct: 492 GRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVV 551

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF------CRQGRMHDSE 435
           +YN L N   R++N+ +A  L++ M ++G  PD +T N+ L          + GR+   E
Sbjct: 552 TYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDE 611

Query: 436 LIL-----------WRMIE----KGLNPDRSTYTTLINGHVSQNNLKEA 469
           L++            R++E    + L P+ ST++ +I        ++E 
Sbjct: 612 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 660



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 238/457 (52%), Gaps = 23/457 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK  +ID A     EM  K   PD  TY+TL+N  C+E  ++EA  L++ M  +G
Sbjct: 204 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+N LI+ L K G   RA +++D M   G  P+  TYNTL+   C K  + +A 
Sbjct: 264 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M      P+ V++ T+I    +  + +  +     M+  G   +  +Y+ +I+G 
Sbjct: 324 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A+++  EM EKGC  +VV Y   ++GLCR +   EA+D+  EML +G  P+ 
Sbjct: 384 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 443

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++L+ G  K G+  KA+ ++  M  + ++ ++V  + L++G C+ G + +A  +W  
Sbjct: 444 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 503

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK--PTLVSCNTIIKGYCRS 358
           M+   + P+ ++Y  +I G C +G V +  +L+YEM  +  K  P +V+ N +    CR 
Sbjct: 504 MLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQ 563

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNT---------------------LINGFVREENMD 397
            + ++A + L+ M+ EG DPDS++ N                      L+   ++ E   
Sbjct: 564 DNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKL 623

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
            A  +V +M  + L P+  T++ ++   C+  R+ ++
Sbjct: 624 SALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 660



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 220/455 (48%), Gaps = 41/455 (9%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS-EAE 120
           K G  T+  LI             +VLD M + G    T T   L+ ++C K ++  EA 
Sbjct: 86  KLGDATFYRLIENYATSREFHFIHQVLDRMKREG-RVLTETIFILIFKACGKAHLPGEAV 144

Query: 121 EIFCEMSRRGVAPDIV-SFSTLIGIFSRNGQLDRALMYFREM---KSAGLVPDNVLYTII 176
             F  M+        V SF++++ +  + G    A  ++  +    S G  P+ + Y +I
Sbjct: 145 NFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLI 204

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I   C+ G +  A+    EM  K C  DV TY+T++NGLC+ + + EA  L +EM   G 
Sbjct: 205 IKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGC 264

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+  TF  LI    K+G++++A  L D M  K   P+ VTYNTLI G C  G+++KA  
Sbjct: 265 LPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALS 324

Query: 297 LWADMISRKISPNYISYGILING----------------------------YCSM----- 323
           L   M+S K  PN ++YG +ING                            Y S+     
Sbjct: 325 LLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLF 384

Query: 324 --GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G    A RLW EM  KG KP +V     I G CR     +A++ L +M+S+G  P++ 
Sbjct: 385 KEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAF 444

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y++L+ GF ++ +  KA  +  +M +Q +  +V+  +V+L G C  GR+ ++  +   M
Sbjct: 445 TYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHM 504

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           + +GL PD   Y+++I G     ++ +  +   EM
Sbjct: 505 LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 191/393 (48%), Gaps = 37/393 (9%)

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           +G  P++++++ +I    + GQ+DRA+  FREM      PD   Y+ ++NG C+   V E
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A+ + DEM  +GC+ + VT+N +++ L +   L+ A  L + M  +G  P+  T+ TLIH
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 311

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G C  G ++KAL+L + M      P+ VTY T+I+G  K    E    +   M  R    
Sbjct: 312 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 371

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N   Y  LI+G    G    A RLW EM  KG KP +V     I G CR     +A++ L
Sbjct: 372 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 431

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M+S+G  P++ +Y++L+ GF ++ +  KA  +  +M +Q +  +V+  +V+L G C  
Sbjct: 432 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 491

Query: 429 GRMHDSELILWRMIEKGLNPDRS------------------------------------- 451
           GR+ ++  +   M+ +GL PD                                       
Sbjct: 492 GRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVV 551

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           TY  L N    Q+NL  A    + ML  G  PD
Sbjct: 552 TYNILFNALCRQDNLTRAIDLLNSMLDEGCDPD 584



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 5/177 (2%)

Query: 315 ILINGYCSMGHVT-EAFRLWYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           ILI   C   H+  EA   ++ M      K T+ S N+++    + GD S A +F   + 
Sbjct: 128 ILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVF 187

Query: 373 ---SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
              S+G  P+ ++YN +I    +   +D+A     +M  +   PDV TY+ ++ G C++ 
Sbjct: 188 GANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKER 247

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           R+ ++  +L  M  +G  P+  T+  LI+      +L  A +  D M  +G VP++ 
Sbjct: 248 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEV 304



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 23/147 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEME--QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           M+  LC    +D       EM+  +    PD VTYN L NA CR+  L  A  L+NSM  
Sbjct: 519 MIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLD 578

Query: 59  KGLKPGVFTYN---------------------SLINGLCKKGRCDRAKEVLDEMLQMGLS 97
           +G  P   T N                      L+  L K+ R   A  +++EML   L 
Sbjct: 579 EGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLP 638

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFC 124
           P+ +T++ ++  +C+ + + E  +  C
Sbjct: 639 PEPSTWSRVIQRTCKPKRIRETIDECC 665


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 247/498 (49%), Gaps = 20/498 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K D A   + EM +KG  PDT TY+ +I   C    +E+AF L   M   G+ P 
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  LI+  CK G  ++A+ + +EM  +G SP   TY  L+    + + + +A +IF 
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M   G  P+ V++  L+    + G + +A                  YF       L P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +++G C+   V  A ++ D ML  GC  + + Y+ +++G C+A  +  A ++F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M + G  P  +T+T+LI    KDG ++ A+ +   M + S  P++VTY  +IDG C++
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           GE EKA KL + M  +  SPN ++Y  LI+G    G +  +  L+ +M  KG  P  V+ 
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C +G   KA   L +M           Y   I GF   ++   +  ++ +ME+
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMES 680

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE--KGLNPDRSTYTTLINGHVSQNNL 466
            G VP    Y +++  F + GR+  +  +   M+E    +  D   Y +LI      + +
Sbjct: 681 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQV 740

Query: 467 KEAFRFHDEMLQRGFVPD 484
           +EAFR + EM +RGFVP+
Sbjct: 741 EEAFRLYSEMTRRGFVPE 758



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 255/500 (51%), Gaps = 22/500 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  ++   K  +  M  +G  P+   +N+L+++YC E     A++L+N M+  G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 61  LKPGVFTYNSLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
             PG   YN  I  +C + +       D A+++  EML      +           C   
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              +A ++  EM R+G  PD  ++S +I       ++++A + F+EMK  G+ PD   YT
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+I+ +C+ G + +A  + +EM   GC   VVTY  +++   +AK + +A+D+F+ M++ 
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNL----------------FDIMTQKSIKPDIVTY 278
           G  P+  T+  L+ G CK GN++KA  +                F    + ++ P++VTY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
             L+DG CK  +++ A++L   M+S    PN+I Y  LI+G+C  G +  A  ++ +M  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G  P++ +  ++I    + G    A + LS+M+ +   P+ ++Y  +I+G  R    +K
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  L+S ME +G  P+V+TY  ++ G  + G++  S  +  +M  KG +P+  TY  LIN
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 459 GHVSQNNLKEAFRFHDEMLQ 478
              +   L +A     EM Q
Sbjct: 628 HLCAAGLLDKARLLLGEMKQ 647



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 237/506 (46%), Gaps = 22/506 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L +    D A  FL  M      P+ VTY TL++ + ++  L    +++N M  +G
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 172

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-- 118
             P    +NSL++  C +     A ++L+ M   G  P    YN  +   C +E +    
Sbjct: 173 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232

Query: 119 ----AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
               AE+I+ EM       + V+ +         G+ D+A    +EM   G VPD   Y+
Sbjct: 233 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 292

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I   C    V +A  +  EM   G   DV TY  +++  C+A ++ +A  LF EM   
Sbjct: 293 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P   T+T LIH + K   + +A ++F  M     +P+ VTY  L+DG CK G + KA
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 295 NKLWADMIS----------------RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            +++A +I                   ++PN ++YG L++G C    V  A  L   M+ 
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G +P  +  + +I G+C++G    A E   +M   G  P   +Y +LI+   ++  +D 
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  ++S+M      P+V+TY  ++ G CR G    +  +L  M EKG +P+  TYT LI+
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 592

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G      +  +     +M ++G  P+
Sbjct: 593 GLGKAGKIDLSLDLFTQMSRKGCSPN 618



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 237/498 (47%), Gaps = 51/498 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   K++ A +   EM+  GV PD  TY  LI+++C+ G +E+A  L   M   G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY +LI+   K  +  +A ++   M+  G  P+  TY  L+   C+  N+S+A 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 121 EIFCEM----------------SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           E++ ++                 R  +AP++V++  L+    +  ++D A      M S+
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  P++++Y  +I+G+C+ G +  A ++  +M + G +  V TY ++++ + +   L  A
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             + ++ML+    P+  T+T +I G C+ G   KAL L  +M +K   P++VTY  LIDG
Sbjct: 534 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 593

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL--------W--- 333
             K G+++ +  L+  M  +  SPNY++Y +LIN  C+ G + +A  L        W   
Sbjct: 594 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 653

Query: 334 ----------------------YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
                                  EM   G  P       +I  + ++G    A E   +M
Sbjct: 654 LQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713

Query: 372 --VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
             V   V  D+  Y +LI        +++AF L S+M  +G VP++  +  ++ G     
Sbjct: 714 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 773

Query: 430 RMHDSELILWRMIEKGLN 447
           +  ++  + + +  +G+N
Sbjct: 774 KWDEALQLCYGICHEGVN 791



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 219/514 (42%), Gaps = 54/514 (10%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC--- 81
           G  P  VTYN L+      G ++  F++   MS  G     FT     + LCK+GR    
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 82  -----------------------------DRAKEVLDEMLQMGLSPDTATYNTLLVESCR 112
                                        D A   L  M      P+  TY TLL    +
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 113 KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           K+ +   + I   M   G  P+   F++L+  +        A      M + G  P  V+
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 173 YTIIINGYCRN------GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
           Y I I   C          +  A K+  EML   CV++ V        LC      +A  
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L  EM+ +G  PD  T++ +I   C    + KA  LF  M    + PD+ TY  LID FC
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G +E+A  L+ +M S   SP  ++Y  LI+ Y     V +A  +++ MV  G +P  V
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMV--SEGVD--------------PDSISYNTLINGF 390
           +   ++ G C++G+ SKA E  +K++  S+  D              P+ ++Y  L++G 
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +   +D A  L+  M + G  P+ I Y+ ++ GFC+ G++  ++ +  +M + G  P  
Sbjct: 455 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 514

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TYT+LI+       L  A +   +ML+    P+
Sbjct: 515 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 174/406 (42%), Gaps = 11/406 (2%)

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           D +   G  P   TYN L+        +     +  EMS  G   D  +         + 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 149 GQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           G+   AL M  RE        D VL T +I+G     +  EA+     M    C+ +VVT
Sbjct: 89  GRWADALDMIERE----DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T+L+G  + K L     + N M+  G  P+   F +L+H +C + +   A  L + MT
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEK------ANKLWADMISRKISPNYISYGILINGYC 321
                P  V YN  I   C   ++        A K++ +M++     N ++        C
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
            +G   +AF+L  EM+ KG  P   + + +I   C +    KA     +M   GV PD  
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y  LI+ F +   +++A  L  +M + G  P V+TY  ++  + +  ++  +  I  RM
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           ++ G  P+  TY  L++G     N+ +AF  + +++      D  F
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 430


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 247/498 (49%), Gaps = 20/498 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K D A   + EM +KG  PDT TY+ +I   C    +E+AF L   M   G+ P 
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  LI+  CK G  ++A+ + +EM  +G SP   TY  L+    + + + +A +IF 
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M   G  P+ V++  L+    + G + +A                  YF       L P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +++G C+   V  A ++ D ML  GC  + + Y+ +++G C+A  +  A ++F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M + G  P  +T+T+LI    KDG ++ A+ +   M + S  P++VTY  +IDG C++
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           GE EKA KL + M  +  SPN ++Y  LI+G    G +  +  L+ +M  KG  P  V+ 
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C +G   KA   L +M           Y   I GF   ++   +  ++ +ME+
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMES 680

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE--KGLNPDRSTYTTLINGHVSQNNL 466
            G VP    Y +++  F + GR+  +  +   M+E    +  D   Y +LI      + +
Sbjct: 681 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQV 740

Query: 467 KEAFRFHDEMLQRGFVPD 484
           +EAFR + EM +RGFVP+
Sbjct: 741 EEAFRLYSEMTRRGFVPE 758



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 255/500 (51%), Gaps = 22/500 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  ++   K  +  M  +G  P+   +N+L+++YC E     A++L+N M+  G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 61  LKPGVFTYNSLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
             PG   YN  I  +C + +       D A+++  EML      +           C   
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              +A ++  EM R+G  PD  ++S +I       ++++A + F+EMK  G+ PD   YT
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+I+ +C+ G + +A  + +EM   GC   VVTY  +++   +AK + +A+D+F+ M++ 
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNL----------------FDIMTQKSIKPDIVTY 278
           G  P+  T+  L+ G CK GN++KA  +                F    + ++ P++VTY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
             L+DG CK  +++ A++L   M+S    PN+I Y  LI+G+C  G +  A  ++ +M  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G  P++ +  ++I    + G    A + LS+M+ +   P+ ++Y  +I+G  R    +K
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  L+S ME +G  P+V+TY  ++ G  + G++  S  +  +M  KG +P+  TY  LIN
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 459 GHVSQNNLKEAFRFHDEMLQ 478
              +   L +A     EM Q
Sbjct: 628 HLCAAGLLDKARLLLGEMKQ 647



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 237/506 (46%), Gaps = 22/506 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L +    D A  FL  M      P+ VTY TL++ + ++  L    +++N M  +G
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 172

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-- 118
             P    +NSL++  C +     A ++L+ M   G  P    YN  +   C +E +    
Sbjct: 173 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232

Query: 119 ----AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
               AE+I+ EM       + V+ +         G+ D+A    +EM   G VPD   Y+
Sbjct: 233 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 292

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I   C    V +A  +  EM   G   DV TY  +++  C+A ++ +A  LF EM   
Sbjct: 293 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P   T+T LIH + K   + +A ++F  M     +P+ VTY  L+DG CK G + KA
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 295 NKLWADMIS----------------RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            +++A +I                   ++PN ++YG L++G C    V  A  L   M+ 
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G +P  +  + +I G+C++G    A E   +M   G  P   +Y +LI+   ++  +D 
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  ++S+M      P+V+TY  ++ G CR G    +  +L  M EKG +P+  TYT LI+
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 592

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G      +  +     +M ++G  P+
Sbjct: 593 GLGKAGKIDLSLDLFTQMSRKGCSPN 618



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 227/476 (47%), Gaps = 51/476 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   K++ A +   EM+  GV PD  TY  LI+++C+ G +E+A  L   M   G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY +LI+   K  +  +A ++   M+  G  P+  TY  L+   C+  N+S+A 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 121 EIFCEM----------------SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           E++ ++                 R  +AP++V++  L+    +  ++D A      M S+
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  P++++Y  +I+G+C+ G +  A ++  +M + G +  V TY ++++ + +   L  A
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             + ++ML+    P+  T+T +I G C+ G   KAL L  +M +K   P++VTY  LIDG
Sbjct: 534 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 593

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL--------W--- 333
             K G+++ +  L+  M  +  SPNY++Y +LIN  C+ G + +A  L        W   
Sbjct: 594 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 653

Query: 334 ----------------------YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
                                  EM   G  P       +I  + ++G    A E   +M
Sbjct: 654 LQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713

Query: 372 --VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
             V   V  D+  Y +LI        +++AF L S+M  +G VP++  +  ++ G 
Sbjct: 714 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 220/514 (42%), Gaps = 54/514 (10%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR---- 80
           G  P  VTYN L+      G ++  F++   MS  G     FT     + LCK+GR    
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 81  ---------------C-------------DRAKEVLDEMLQMGLSPDTATYNTLLVESCR 112
                          C             D A   L  M      P+  TY TLL    +
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 113 KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           K+ +   + I   M   G  P+   F++L+  +        A      M + G  P  V+
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 173 YTIIINGYCRN------GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
           Y I I   C          +  A K+  EML   CV++ V        LC      +A  
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L  EM+ +G  PD  T++ +I   C    + KA  LF  M    + PD+ TY  LID FC
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G +E+A  L+ +M S   SP  ++Y  LI+ Y     V +A  +++ MV  G +P  V
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMV--SEGVD--------------PDSISYNTLINGF 390
           +   ++ G C++G+ SKA E  +K++  S+  D              P+ ++Y  L++G 
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +   +D A  L+  M + G  P+ I Y+ ++ GFC+ G++  ++ +  +M + G  P  
Sbjct: 455 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 514

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            TYT+LI+       L  A +   +ML+    P+
Sbjct: 515 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 215/450 (47%), Gaps = 27/450 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K  ++  A      M   G  P+ VTY  L++  C+ G + +AF++   + G  
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423

Query: 61  ----------------LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                           L P V TY +L++GLCK  + D A E+LD ML  G  P+   Y+
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   +  A+E+F +M++ G  P + ++++LI    ++G+LD A+    +M   
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V YT +I+G CR G   +ALK+   M EKGC  +VVTY  +++GL +A  +  +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            DLF +M  +G  P++ T+  LI+  C  G ++KA  L   M Q      +  Y   I G
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG 663

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM--VGKGIK 342
           F K      +  +  +M S    P    YG+LI+ +   G +  A  L  EM  V   +K
Sbjct: 664 FSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVK 721

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
                  ++I+  C +    +A    S+M   G  P+   +  LI G V  +  D+A  L
Sbjct: 722 TDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781

Query: 403 VSKMENQ-GLVPD------VITYNVILTGF 425
              + ++ GL+        + T+ VI+ G+
Sbjct: 782 CYGICHEVGLLLSYTTQIFLFTFVVIVVGY 811



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 174/406 (42%), Gaps = 11/406 (2%)

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           D +   G  P   TYN L+        +     +  EMS  G   D  +         + 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 149 GQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           G+   AL M  RE        D VL T +I+G     +  EA+     M    C+ +VVT
Sbjct: 89  GRWADALDMIERE----DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T+L+G  + K L     + N M+  G  P+   F +L+H +C + +   A  L + MT
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEK------ANKLWADMISRKISPNYISYGILINGYC 321
                P  V YN  I   C   ++        A K++ +M++     N ++        C
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
            +G   +AF+L  EM+ KG  P   + + +I   C +    KA     +M   GV PD  
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y  LI+ F +   +++A  L  +M + G  P V+TY  ++  + +  ++  +  I  RM
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           ++ G  P+  TY  L++G     N+ +AF  + +++      D  F
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 430


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 254/490 (51%), Gaps = 6/490 (1%)

Query: 1   MVNALCKDHK-----IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS 55
           M+N  CK+       ++ A + L EME+KG  P  VTY   I+  CR G +E+A+  +  
Sbjct: 191 MINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQD 250

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           +        ++ YN+LI G C+KGR D A ++L+EM   G+SPD  +Y+ L+   C + +
Sbjct: 251 LRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGD 310

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +     +  EM      P +V  ++++      G ++  L +F E+ + G   D + Y+ 
Sbjct: 311 IESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYST 370

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I+G+ +   V  A  +  EM + G V D + Y +++   CR   L EA   F  ML+ G
Sbjct: 371 LIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDG 430

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + PD  T   ++  +C  G   +AL   + M  ++I P+  TY+ +I+  CK   +EKA 
Sbjct: 431 LQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAW 490

Query: 296 KLWADMISRKISPNYISYGILINGYC-SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
           ++   M    I P+ I Y  +++GY     +  +A++L+ +M   G KP  V+   ++  
Sbjct: 491 EVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDM 550

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           + + G  SKA     +M  EG+  D  ++  +I+G+ R  N+ +A+++  KM+   + P+
Sbjct: 551 FSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPN 610

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V TY  ++ GFC+  R+  + +++  M    + PD  TYT LI G+    N+  A+   D
Sbjct: 611 VKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFD 670

Query: 475 EMLQRGFVPD 484
           EM ++G +PD
Sbjct: 671 EMKKKGTLPD 680



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 210/422 (49%), Gaps = 36/422 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM---- 56
           ++   C+  + D A   L EM+ +G+ PD  +Y+ L+NA+C EG +E    L+  M    
Sbjct: 266 LIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCN 325

Query: 57  -------------------------------SGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                                          S KG K  + +Y++LI+G  K      A 
Sbjct: 326 KKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSAN 385

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            ++ EM + GL PD   Y +L+ E CRK  + EA + F  M + G+ PDI++ + ++  +
Sbjct: 386 NLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQY 445

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              GQ + AL+Y  +MK   ++P++  Y++IIN  C+   V +A ++   M +      V
Sbjct: 446 CSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSV 505

Query: 206 VTYNTILNGLCRA-KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + Y TI++G  +  K   +A  L+ +M + G  PD  T T L+    K G M+KALNLF 
Sbjct: 506 IHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFK 565

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M ++ +  D   +  +IDG+C+VG +++A  ++  M    ++PN  +Y  L++G+C + 
Sbjct: 566 EMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLK 625

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +  A  L  +M    + P + +   +I GY R  +  +A E   +M  +G  PD I+Y 
Sbjct: 626 RLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYL 685

Query: 385 TL 386
           TL
Sbjct: 686 TL 687



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 226/456 (49%), Gaps = 6/456 (1%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           LI  +     L +A  +       G++  + + N L+  L +  + +  + + D++   G
Sbjct: 121 LIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSG 180

Query: 96  LSPDTATYNTLLVESCRKE-----NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
            SP+  TY  ++   C++      +M +A  I  EM  +G  P +V++   I    R G 
Sbjct: 181 PSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGS 240

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           ++ A    ++++S+    +   Y  +I G+C+ G   EALK+ +EM ++G   D+ +Y+ 
Sbjct: 241 IEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSI 300

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           ++N  C    +    +L  EM      P     T+++ G    G +N  LN F  ++ K 
Sbjct: 301 LVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKG 360

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            K D+++Y+TLI GF K   ++ AN L  +M    + P+YI Y  LI  YC  G + EA 
Sbjct: 361 YKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEAL 420

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           + +Y M+  G++P +++CN I+  YC  G   +A  ++++M  + + P+S +Y+ +IN  
Sbjct: 421 KNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWL 480

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-GLNPD 449
            + + ++KA+ ++  M    + P VI Y  I+ G+ +Q +       L+R + K G  PD
Sbjct: 481 CKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPD 540

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             T T L++    +  + +A     EM + G   D+
Sbjct: 541 NVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDE 576



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 207/450 (46%), Gaps = 62/450 (13%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRR--GVAPDIVSFSTLIGIFS-----RNG 149
           +P     + L+VE  +  N   A ++    S    G    I +F T++ +F+     R  
Sbjct: 20  NPKRCELSRLVVELLKTLNWEVARQVKFSKSVNVYGFFYSINAFRTIVHVFALAGLQREA 79

Query: 150 Q--LDRALMYFRE--MKSAGLV------PDNV-----LYTIIINGYCRNGFVLEALKMRD 194
           Q  L   + Y++E  +  +GL       P+ V     + +++I  +  N  + +A  +  
Sbjct: 80  QYLLTDIVFYYKEENLNVSGLFSTFLDSPECVGRSATVLSLLIKVFASNKMLADAKDVFM 139

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           +  + G  +++ + N +L  L     L     LF+++   G  P+ YT+T +I+ +CK+ 
Sbjct: 140 QAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKER 199

Query: 255 -----NMNKALNLFDIMTQKSIKPDIVT-------------------------------- 277
                +M +A  + + M +K   P +VT                                
Sbjct: 200 HGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLN 259

Query: 278 ---YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
              YN LI GFC+ G  ++A KL  +M    ISP+  SY IL+N +C+ G +     L  
Sbjct: 260 IYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQ 319

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM     KP LV C +++ G    G  +    F  ++ ++G   D ISY+TLI+GF++  
Sbjct: 320 EMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGH 379

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           N+  A  LV +M   GLVPD I Y  ++  +CR+G + ++    + M++ GL PD  T  
Sbjct: 380 NVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCN 439

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +++ + S+   +EA  + ++M  +  +P+
Sbjct: 440 HIVDQYCSRGQFEEALIYINQMKDQNILPN 469


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 253/484 (52%), Gaps = 5/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL +++ + +  +    M + GV+P+  TYN L+ A C+   +  A ++++ M+ KG
Sbjct: 134 LIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG 193

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY ++++ LCK  R D A EVL  M      P  A+YN +++  CR+  M E  
Sbjct: 194 CPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVF 248

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  RG+ P++++++T++  F + G+L  A      M   G  P+ V +T ++ G 
Sbjct: 249 SVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGL 308

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G V +AL M   M+ +G     V+YN ++ GLC    L  A  + N M + G FP+ 
Sbjct: 309 FDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNV 368

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI G  K G++  A+++++ M++   KP++V Y  ++D FCK     +A  L   
Sbjct: 369 RTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDK 428

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     PN +++  LI   C    V  A  +++EM   G  P   + N +I G  R G+
Sbjct: 429 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 488

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   +++M S G++   ++YNT+++G  +     +A   V KM  QG+ P+  T++ 
Sbjct: 489 CGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSA 548

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+  +C++G +  +  +L  M     + +   YT L+    +Q+ L +A  +  +ML  G
Sbjct: 549 IIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEG 608

Query: 481 FVPD 484
             P+
Sbjct: 609 IYPN 612



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 248/459 (54%), Gaps = 5/459 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC+++++ +A+  L EM +KG  PD VTY T+++  C+   L+EA +++ +M    
Sbjct: 169 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM---- 224

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   +YN+++  LC++ R      V+ +M+  GL P+  TY T++   C+   +  A 
Sbjct: 225 -PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 283

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   G  P++V+F+ L+     +G++  AL  +R M + G  P  V Y I+I G 
Sbjct: 284 AILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 343

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A  + + M + GC  +V TY+T+++G  +A  L  A  ++N+M   G  P+ 
Sbjct: 344 CSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 403

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T ++   CK    N+A +L D M  ++  P+ VT+NTLI   C    + +A  ++ +
Sbjct: 404 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 463

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y  LI+G    G+  +A  +  EM   GI+ +LV+ NT++ G C++  
Sbjct: 464 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 523

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + +A  F+ KM+ +G+ P++ +++ +I+ + +E  +  A  ++  M       +++ Y +
Sbjct: 524 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 583

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++   C Q ++ D+   L +M+ +G+ P+  T+  L+ G
Sbjct: 584 LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 622



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 184/393 (46%), Gaps = 33/393 (8%)

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLV--PDNVLYTIIINGYC 181
           EM  RGV     +    +G F+R G  DRAL  ++R +   G     +  LY  +I+   
Sbjct: 80  EMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALL 139

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R   V   + + D M + G   +V TYN ++  LC+   +  A  + +EM  +G  PD  
Sbjct: 140 RENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDV 199

Query: 242 TFTTLIH------------------------------GHCKDGNMNKALNLFDIMTQKSI 271
           T+ T++                                 C++  M +  ++   M  + +
Sbjct: 200 TYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGL 259

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           +P+++TY T++D FCK GE+  A  + A M+    +PN +++  L+ G    G V +A  
Sbjct: 260 QPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALD 319

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +W  MV +G  P+ VS N +I+G C  GD   A   L+ M   G  P+  +Y+TLI+GF 
Sbjct: 320 MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFS 379

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +  ++  A ++ + M   G  P+V+ Y  ++  FC++   + ++ ++ +M+ +   P+  
Sbjct: 380 KAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTV 439

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           T+ TLI        +  A     EM + G VP+
Sbjct: 440 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPN 472



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 111/231 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+  CK    + AK  + +M  +   P+TVT+NTLI + C    +  A  + + M   G
Sbjct: 409 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 468

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN LI+GL ++G C  A  ++ EM   G+     TYNT++   C+     EA 
Sbjct: 469 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 528

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +M  +G+ P+  +FS +I  + + G++  A      M       + ++YTI++   
Sbjct: 529 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 588

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           C    +++A+    +ML +G   + VT+N ++ G+ R     E  D    +
Sbjct: 589 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHI 639


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 244/446 (54%), Gaps = 2/446 (0%)

Query: 16  MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-KGLKP-GVFTYNSLIN 73
           + L  M + G  PD  +Y  L+   C +   ++A  L++ M+  KG  P  V  Y ++IN
Sbjct: 157 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 216

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
           GL ++G+ D+A  + D ML  G SPD  TY++++    + + M +A ++F  M + GV P
Sbjct: 217 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 276

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D + +++L+  +  +G+   A+  F++M   G+ PD V YT +++  C+NG   EA K+ 
Sbjct: 277 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 336

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
           D ++++G   D  TY T+L+G      L E  DL + M+++G+    + F  ++  + K 
Sbjct: 337 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH 396

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
             +++AL +F  M Q+ + PDIV Y T++D  C  G ++ A   +  + S  ++PN + +
Sbjct: 397 NKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVF 456

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             LI+G C+     +   L +EM+ +GI    +  N I+   C+ G   +A      MV 
Sbjct: 457 TTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR 516

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G++P++ +YNTLI+G+  +  MD+A  L+  M   G+ P  +TYN I+ G+ + GR+ D
Sbjct: 517 IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIED 576

Query: 434 SELILWRMIEKGLNPDRSTYTTLING 459
              +L  M  KG+NP   TY  L+ G
Sbjct: 577 GLTLLREMDGKGVNPGIVTYEMLLQG 602



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 238/445 (53%), Gaps = 2/445 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEM-EQKGVYP-DTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++  LC D     A   L  M + KG  P D V Y T+IN   REG L++A+ L ++M  
Sbjct: 177 LLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLD 236

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           +G  P V TY+S+I+ L K    D+A +V   M++ G+ PD   Y +L+   C      E
Sbjct: 237 RGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKE 296

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  IF +M R GV PD+V+++ L+    +NG+   A   F  +   G  PD+  Y  +++
Sbjct: 297 AIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLH 356

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G ++E   + D M++KG  +    +N I+    +   + EA  +F+ M ++G+ P
Sbjct: 357 GYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNP 416

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   + T++   C  G ++ AL+ F+ +  + + P+IV + TLI G C   + +K  +L 
Sbjct: 417 DIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELA 476

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +MI R I  + I +  ++   C  G V EA  L+  MV  GI+P   + NT+I GYC  
Sbjct: 477 FEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLD 536

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A + L  MV  GV P  ++YNT+ING+ +   ++    L+ +M+ +G+ P ++TY
Sbjct: 537 GKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTY 596

Query: 419 NVILTGFCRQGRMHDSELILWRMIE 443
            ++L G  + GR   ++ +  RMI+
Sbjct: 597 EMLLQGLFQAGRTVAAKELYLRMIK 621



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 232/462 (50%), Gaps = 4/462 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLING-LCKKG-RCDRAK 85
           P+  TY  +I    R G L+ AF  +  +   GL+       S   G LC  G R  R  
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMD 156

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS-RRGVAP-DIVSFSTLIG 143
            VL  M ++G  PD  +Y  LL   C  +   +A ++   M+  +G  P D+V+++T+I 
Sbjct: 157 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 216

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
              R GQLD+A   F  M   G  PD V Y+ II+   +   + +A ++   M++ G + 
Sbjct: 217 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 276

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D + Y ++++G C +    EA  +F +M   GV PD  T+T L+   CK+G   +A  +F
Sbjct: 277 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 336

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D + ++  KPD  TY TL+ G+   G + + + L   M+ + +   +  + +++  Y   
Sbjct: 337 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH 396

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             V EA  ++  M  +G+ P +V+  T++   C +G    A    + + SEG+ P+ + +
Sbjct: 397 NKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVF 456

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            TLI+G    +  DK   L  +M ++G+  D I +N I+   C++GR+ +++ +   M+ 
Sbjct: 457 TTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR 516

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            G+ P+ +TY TLI+G+     + EA +    M+  G  P D
Sbjct: 517 IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 558



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 207/446 (46%), Gaps = 43/446 (9%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV---APDIVSFST 140
           A +V D +L+ G        N  L +  R  + + A  +F  M R G    AP+I ++  
Sbjct: 46  AHQVFDRLLKRGDRASIFDLNRALSDVAR-ASPAVAISLFNRMPRAGATSAAPNIATYGI 104

Query: 141 LIGIFSRNGQLDRAL-------------------------------------MYFREMKS 163
           +IG   R G+LD A                                      +  R M  
Sbjct: 105 VIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRMPE 164

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE-KG-CVMDVVTYNTILNGLCRAKML 221
            G  PD   YTI++ G C +    +AL +   M + KG C +DVV Y T++NGL R   L
Sbjct: 165 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQL 224

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
            +A  LF+ ML+RG  PD  T++++I    K   M+KA  +F  M +  + PD + Y +L
Sbjct: 225 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 284

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           + G+C  G+ ++A  ++  M    + P+ ++Y  L++  C  G  TEA +++  +V +G 
Sbjct: 285 VHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH 344

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
           KP   +  T++ GY   G   +  + L  M+ +G+      +N ++  + +   +D+A  
Sbjct: 345 KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALL 404

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           + S M  QGL PD++ Y  +L   C  GR+ D+      +  +GL P+   +TTLI+G  
Sbjct: 405 VFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLC 464

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDDAF 487
           + +   +      EM+ RG   D  F
Sbjct: 465 TCDKWDKVEELAFEMIDRGICLDTIF 490


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 236/453 (52%), Gaps = 6/453 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ ++Y  L+ A CR G +++A   +  M+ + L P VFTYN +I+ LCK  R  RA E 
Sbjct: 33  PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 92

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            + M +    PD  TYNTLL   C+   +++A  +F  M   G+ P  V+++TLI +F +
Sbjct: 93  FETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 148

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
             Q + A    + M S    P    Y  IING C+N  V +A ++ +EM   GC  D VT
Sbjct: 149 MCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVT 208

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT+++GLC  + L EA DL   M+E G  PD  TFT LI G C    + +A  LF  M 
Sbjct: 209 YNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMA 268

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++   PD+VT+  L+   C + ++  A  +  +  +       I Y  +           
Sbjct: 269 KQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPA--CPEAVILYTPIFRELGRRRGFD 326

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A RL  +M  +G+ P +V+     KG     +  +A     +M+ +G++PD ++YN L+
Sbjct: 327 RAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLV 386

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +GF + + +D A  +V  M+  GL P+++TYN ++   CR+G++     +L  M+ +G  
Sbjct: 387 DGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQ 446

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           PD +T++TL+ G         A+ F +  + +G
Sbjct: 447 PDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 227/456 (49%), Gaps = 6/456 (1%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           VT N L++   R    E+   +   +  +  KP   +Y  L+  LC+ G+ D+A   + E
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M +  L PD  TYN ++   C+   +S A E F  M      PD+V+++TL+G   +NG+
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           + +A   F  M+ AG+ P +V YT +I+ +C+      A  +   M  + C   V +Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           I+NGLC+ + + +A  LF EM   G  PD  T+ TLIHG C    +++A +L  +M +  
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            +PD +T+  LI+G C    +++A  L+  M  +  +P+ +++ +L++  C +  +  A 
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            +            ++    I +   R     +A   L KM   GV P+ ++Y     G 
Sbjct: 297 SVVRNY--PACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL 354

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
              +   +A+    +M  QG+ PD++ YNV++ GFC+  R+  +E ++  M + GL P+ 
Sbjct: 355 GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNI 414

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            TY TL+  H  +  ++        M+ RG  PD A
Sbjct: 415 VTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVA 450



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 212/425 (49%), Gaps = 6/425 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC+  KID A   + EM ++ + PD  TYN +I+  C+   +  A +   +M    
Sbjct: 41  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP--- 97

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN+L+ GLCK GR  +A  +   M   G++P   TY TL+   C+      A 
Sbjct: 98  -EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 156

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+ R  +P + S+ ++I    +N ++D+A   F EMK AG  PD V Y  +I+G 
Sbjct: 157 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 216

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA  +   M+E G   D +T+  ++ GLC    + EA  LF  M ++G  PD 
Sbjct: 217 CVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 276

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T T L+   C    +  AL++  +    +    ++ Y  +     +    ++A +L   
Sbjct: 277 VTHTVLVSKLCILRKLRPALSV--VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQK 334

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + PN ++Y     G         A+R +  M+ +GI+P +V+ N ++ G+C++  
Sbjct: 335 MARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADR 394

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A++ +  M   G+ P+ ++YNTL+    R+  ++    L+  M ++G  PDV T++ 
Sbjct: 395 LDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWST 454

Query: 421 ILTGF 425
           ++ G 
Sbjct: 455 LVAGL 459



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 191/377 (50%), Gaps = 6/377 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+ ++  A      ME  G+ P  VTY TLI+ +C+    E A+ L+  M+ + 
Sbjct: 107 LLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRK 166

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V++Y S+INGLCK  + D+A ++ +EM   G  PD  TYNTL+   C K+ + EA+
Sbjct: 167 CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAK 226

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M   G  PD ++F+ LI       ++  A + F+ M   G  PD V +T++++  
Sbjct: 227 DLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKL 286

Query: 181 CRNGFVLEALKMRDEMLE--KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           C    +L  L+    ++     C   V+ Y  I   L R +    A  L  +M  RGV P
Sbjct: 287 C----ILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPP 342

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  T+T    G        +A   F  M ++ I+PD+V YN L+DGFCK   ++ A K+ 
Sbjct: 343 NVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMV 402

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M    + PN ++Y  L+  +C  G V     L + MV +G +P + + +T++ G    
Sbjct: 403 RYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMV 462

Query: 359 GDASKADEFLSKMVSEG 375
           G A  A  FL+  +S+G
Sbjct: 463 GQADAAYSFLNLAMSQG 479


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 246/453 (54%), Gaps = 1/453 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VNA    H  D A  FL  M  +G  P + T+N L+    R  + ++A+ + N +  K 
Sbjct: 95  IVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKSK- 153

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +    +++  +I G C+ G   R   +L  + + GLSP+   Y TL+   C+  ++  A+
Sbjct: 154 VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAK 213

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +FC+M R G+ P+  ++S L+  F + G        +  M  +G+VP+   Y  +I+ Y
Sbjct: 214 NLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEY 273

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G V +A K+  EM EKG    V+TYN ++ GLCR K   EA  L +++ + G+ P+ 
Sbjct: 274 CNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNI 333

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI+G C  G M+ A+ LF+ +    + P +VTYNTLI G+ KV  +  A  L  +
Sbjct: 334 VTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKE 393

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I+ + ++Y ILI+ +  + +  +A  +   M   G+ P + + + +I G C +G+
Sbjct: 394 MEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGN 453

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    +    + P+S+ YNT+I+G+ +E +  +A  L+++M + G+VP+V ++  
Sbjct: 454 MKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            +   CR  +  ++EL+L +MI  GL P  S Y
Sbjct: 514 TMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/419 (31%), Positives = 217/419 (51%), Gaps = 1/419 (0%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y++++N        D+A   L  M+  G +P + T+N LL    R     +A  IF  + 
Sbjct: 92  YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIF-NVL 150

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           +  V  +  SF  +I      G   R       ++  GL P+ V+YT +I+G C+NG V+
Sbjct: 151 KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVM 210

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A  +  +M   G V +  TY+ ++NG  +  +  E   ++  M   G+ P+ Y +  LI
Sbjct: 211 LAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLI 270

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
             +C DG ++KA  +F  M +K I   ++TYN LI G C+  +  +A KL   +    +S
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN ++Y ILING+C +G +  A RL+ ++   G+ PTLV+ NT+I GY +  + + A + 
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           + +M    +    ++Y  LI+ F R    DKA  + S ME  GLVPDV TY+V++ G C 
Sbjct: 391 VKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCV 450

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            G M ++      + E  L P+   Y T+I+G+  + +   A R  +EM+  G VP+ A
Sbjct: 451 NGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVA 509



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 99/211 (46%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   K+D+A     +++  G+ P  VTYNTLI  Y +   L  A  L+  M  + 
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY  LI+   +    D+A E+   M + GL PD  TY+ L+   C   NM EA 
Sbjct: 399 IARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEAS 458

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F  +    + P+ V ++T+I  + + G   RAL    EM  +G+VP+   +   +   
Sbjct: 459 KPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLL 518

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           CR+    EA  +  +M+  G    V  Y  +
Sbjct: 519 CRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 247/498 (49%), Gaps = 20/498 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K D A   + EM +KG  PDT TY+ +I   C    +E+AF L   M   G+ P 
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 257

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  LI+  CK G  ++A+ + +EM  +G SP   TY  L+    + + + +A +IF 
Sbjct: 258 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M   G  P+ V++  L+    + G + +A                  YF       L P
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 377

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +++G C+   V  A ++ D ML  GC  + + Y+ +++G C+A  +  A ++F
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M + G  P  +T+T+LI    KDG ++ A+ +   M + S  P++VTY  +IDG C++
Sbjct: 438 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 497

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           GE EKA KL + M  +  SPN ++Y  LI+G    G +  +  L+ +M  KG  P  V+ 
Sbjct: 498 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 557

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C +G   KA   L +M           Y   I GF   ++   +  ++ +ME+
Sbjct: 558 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMES 615

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE--KGLNPDRSTYTTLINGHVSQNNL 466
            G VP    Y +++  F + GR+  +  +   M+E    +  D   Y +LI      + +
Sbjct: 616 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQV 675

Query: 467 KEAFRFHDEMLQRGFVPD 484
           +EAFR + EM +RGFVP+
Sbjct: 676 EEAFRLYSEMTRRGFVPE 693



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 255/500 (51%), Gaps = 22/500 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  ++   K  +  M  +G  P+   +N+L+++YC E     A++L+N M+  G
Sbjct: 83  LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 142

Query: 61  LKPGVFTYNSLINGLCKKGRC------DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
             PG   YN  I  +C + +       D A+++  EML      +           C   
Sbjct: 143 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 202

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
              +A ++  EM R+G  PD  ++S +I       ++++A + F+EMK  G+ PD   YT
Sbjct: 203 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 262

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+I+ +C+ G + +A  + +EM   GC   VVTY  +++   +AK + +A+D+F+ M++ 
Sbjct: 263 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 322

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNL----------------FDIMTQKSIKPDIVTY 278
           G  P+  T+  L+ G CK GN++KA  +                F    + ++ P++VTY
Sbjct: 323 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
             L+DG CK  +++ A++L   M+S    PN+I Y  LI+G+C  G +  A  ++ +M  
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G  P++ +  ++I    + G    A + LS+M+ +   P+ ++Y  +I+G  R    +K
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 502

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  L+S ME +G  P+V+TY  ++ G  + G++  S  +  +M  KG +P+  TY  LIN
Sbjct: 503 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 562

Query: 459 GHVSQNNLKEAFRFHDEMLQ 478
              +   L +A     EM Q
Sbjct: 563 HLCAAGLLDKARLLLGEMKQ 582



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 237/506 (46%), Gaps = 22/506 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L +    D A  FL  M      P+ VTY TL++ + ++  L    +++N M  +G
Sbjct: 48  MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 107

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-- 118
             P    +NSL++  C +     A ++L+ M   G  P    YN  +   C +E +    
Sbjct: 108 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167

Query: 119 ----AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
               AE+I+ EM       + V+ +         G+ D+A    +EM   G VPD   Y+
Sbjct: 168 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 227

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I   C    V +A  +  EM   G   DV TY  +++  C+A ++ +A  LF EM   
Sbjct: 228 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P   T+T LIH + K   + +A ++F  M     +P+ VTY  L+DG CK G + KA
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347

Query: 295 NKLWADMIS----------------RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            +++A +I                   ++PN ++YG L++G C    V  A  L   M+ 
Sbjct: 348 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 407

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G +P  +  + +I G+C++G    A E   +M   G  P   +Y +LI+   ++  +D 
Sbjct: 408 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 467

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  ++S+M      P+V+TY  ++ G CR G    +  +L  M EKG +P+  TYT LI+
Sbjct: 468 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 527

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G      +  +     +M ++G  P+
Sbjct: 528 GLGKAGKIDLSLDLFTQMSRKGCSPN 553



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 237/498 (47%), Gaps = 51/498 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   K++ A +   EM+  GV PD  TY  LI+++C+ G +E+A  L   M   G
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY +LI+   K  +  +A ++   M+  G  P+  TY  L+   C+  N+S+A 
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348

Query: 121 EIFCEM----------------SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           E++ ++                 R  +AP++V++  L+    +  ++D A      M S+
Sbjct: 349 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 408

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  P++++Y  +I+G+C+ G +  A ++  +M + G +  V TY ++++ + +   L  A
Sbjct: 409 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 468

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             + ++ML+    P+  T+T +I G C+ G   KAL L  +M +K   P++VTY  LIDG
Sbjct: 469 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 528

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL--------W--- 333
             K G+++ +  L+  M  +  SPNY++Y +LIN  C+ G + +A  L        W   
Sbjct: 529 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 588

Query: 334 ----------------------YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
                                  EM   G  P       +I  + ++G    A E   +M
Sbjct: 589 LQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 648

Query: 372 --VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
             V   V  D+  Y +LI        +++AF L S+M  +G VP++  +  ++ G     
Sbjct: 649 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 708

Query: 430 RMHDSELILWRMIEKGLN 447
           +  ++  + + +  +G+N
Sbjct: 709 KWDEALQLCYGICHEGVN 726



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 205/483 (42%), Gaps = 54/483 (11%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRC--------------------------------DR 83
           MS  G     FT     + LCK+GR                                 D 
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDE 60

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A   L  M      P+  TY TLL    +K+ +   + I   M   G  P+   F++L+ 
Sbjct: 61  AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 120

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN------GFVLEALKMRDEML 197
            +        A      M + G  P  V+Y I I   C          +  A K+  EML
Sbjct: 121 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 180

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
              CV++ V        LC      +A  L  EM+ +G  PD  T++ +I   C    + 
Sbjct: 181 AANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVE 240

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           KA  LF  M    + PD+ TY  LID FCK G +E+A  L+ +M S   SP  ++Y  LI
Sbjct: 241 KAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 300

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV--SEG 375
           + Y     V +A  +++ MV  G +P  V+   ++ G C++G+ SKA E  +K++  S+ 
Sbjct: 301 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 360

Query: 376 VD--------------PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            D              P+ ++Y  L++G  +   +D A  L+  M + G  P+ I Y+ +
Sbjct: 361 ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDAL 420

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + GFC+ G++  ++ +  +M + G  P   TYT+LI+       L  A +   +ML+   
Sbjct: 421 IDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 480

Query: 482 VPD 484
            P+
Sbjct: 481 TPN 483



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 162/369 (43%), Gaps = 11/369 (2%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           MS  G   D  +         + G+   AL M  RE        D VL T +I+G     
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIERE----DFKLDTVLCTHMISGLMEAS 56

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
           +  EA+     M    C+ +VVTY T+L+G  + K L     + N M+  G  P+   F 
Sbjct: 57  YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 116

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK------ANKLW 298
           +L+H +C + +   A  L + MT     P  V YN  I   C   ++        A K++
Sbjct: 117 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 176

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M++     N ++        C +G   +AF+L  EM+ KG  P   + + +I   C +
Sbjct: 177 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 236

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
               KA     +M   GV PD  +Y  LI+ F +   +++A  L  +M + G  P V+TY
Sbjct: 237 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 296

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++  + +  ++  +  I  RM++ G  P+  TY  L++G     N+ +AF  + +++ 
Sbjct: 297 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 356

Query: 479 RGFVPDDAF 487
                D  F
Sbjct: 357 TSDSADSDF 365


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 157/533 (29%), Positives = 257/533 (48%), Gaps = 49/533 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV  LCK+ K++  +  + +   KG  P+ V YNTL++ Y + G +E A  L   +  KG
Sbjct: 211 MVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKG 270

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL------------------------ 96
             P   TY  +INGLCKK        +L EM + G+                        
Sbjct: 271 FLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVG 330

Query: 97  -----------SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                       PD  TYNTL+  SCR   + EAEE+     +RG++P+ +S++ LI ++
Sbjct: 331 KTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVY 390

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G+  RA   F  M   G   D V Y  +++G    G V  AL +RD+M+E+G + D 
Sbjct: 391 CKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDA 450

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN ++NGLC+   L+ A  L  EML + +  D +   TL+ G  + G +++A  LF++
Sbjct: 451 NVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFEL 510

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
              K + P +V YN +I G+CK G M  A      M     SP+  +Y  +I+GY     
Sbjct: 511 TIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQND 570

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A +L+ +MV +  KP +V+  ++I G+CR+GD+S+A++   +M S G+ P+ ++Y  
Sbjct: 571 LHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTI 630

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR------QGRMHDSELI-- 437
           LI  F +E  + KA +    M     +P+ +T+N ++ G           + ++S  I  
Sbjct: 631 LIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKA 690

Query: 438 ------LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                    MI  G     + Y +++        +  A +  D+M  +G  PD
Sbjct: 691 SLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPD 743



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 248/486 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NAL +  K++ A+    EM ++    D  +   ++   C+E  +EE  +L+N   GKG
Sbjct: 176 LLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKG 235

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +  YN+L++G  K+G  +RA  +  E+   G  P T TY  ++   C+K N    +
Sbjct: 236 CIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVD 295

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  RGV  ++  +++++    ++G         R +   G  PD   Y  +I+G 
Sbjct: 296 GLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGS 355

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G V EA ++ +  +++G   + ++Y  +++  C+      A DLF  M E+G   D 
Sbjct: 356 CRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDL 415

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  L+HG    G ++ AL + D M ++ + PD   YN L++G CK G +  A  L  +
Sbjct: 416 VAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVE 475

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + +S +      L++G+   G + EA +L+   + KG+ P +V  N +IKGYC+ G 
Sbjct: 476 MLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGM 535

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A   + +M      PD  +Y+T+I+G+V++ ++  A  L  +M  Q   P+V+TY  
Sbjct: 536 MNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTS 595

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFCR G    +E     M   GL P+  TYT LI     +  + +A  F + ML   
Sbjct: 596 LINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNR 655

Query: 481 FVPDDA 486
            +P+D 
Sbjct: 656 CIPNDV 661



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 246/482 (51%), Gaps = 14/482 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N LCK     +    L EM+++GV  +   YN++++A  + G   E  + +  ++  G
Sbjct: 281 MINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENG 340

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TYN+LI+G C+ G+   A+E+L+  ++ GLSP+  +Y  L+   C++     A 
Sbjct: 341 CEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAF 400

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M+ +G   D+V++  L+      G++D AL    +M   G++PD  +Y +++NG 
Sbjct: 401 DLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGL 460

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A  +  EML +   +D     T+++G  R   L EA  LF   + +G+ P  
Sbjct: 461 CKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGV 520

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  +I G+CK G MN AL     M      PD  TY+T+IDG+ K  ++  A KL+  
Sbjct: 521 VGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQ 580

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +K  PN ++Y  LING+C  G  + A + + EM   G+KP +V+   +I  +C+ G 
Sbjct: 581 MVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGK 640

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVRE----------ENMDKAFALV----SKM 406
            SKA  F   M+     P+ +++N LING              E+++   +L+      M
Sbjct: 641 ISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTM 700

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
            + G    V  YN +L   C    ++ +  +  +M  KG+ PD  ++  L+ G   +   
Sbjct: 701 ISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRS 760

Query: 467 KE 468
           KE
Sbjct: 761 KE 762



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 246/500 (49%), Gaps = 36/500 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMN-SMSGKGLKPGVFTYNSLINGLCKKG 79
           M+ K + P     + ++ AY   G +  A +L + +       P V   N+L+N L ++ 
Sbjct: 125 MKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQK 184

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + + A++V +EM++     D  +   ++   C++  + E  ++  +   +G  P+IV ++
Sbjct: 185 KVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYN 244

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC------------------ 181
           TL+  + + G ++RA   F+E+K  G +P    Y I+ING C                  
Sbjct: 245 TLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKER 304

Query: 182 -----------------RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
                            ++G  +E  K    + E GC  D+ TYNT+++G CR   + EA
Sbjct: 305 GVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEA 364

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
           ++L    ++RG+ P+  ++T LIH +CK G   +A +LF  MT+K    D+V Y  L+ G
Sbjct: 365 EELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHG 424

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
               GE++ A  +   M+ R + P+   Y +L+NG C  G ++ A  L  EM+ + +   
Sbjct: 425 LVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLD 484

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
                T++ G+ R G   +A +     +++G+DP  + YN +I G+ +   M+ A   V 
Sbjct: 485 AFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQ 544

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M++    PD  TY+ I+ G+ +Q  +H++  +  +M+++   P+  TYT+LING     
Sbjct: 545 RMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTG 604

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
           +   A +  +EM   G  P+
Sbjct: 605 DSSRAEKTFEEMRSSGLKPN 624



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 185/413 (44%), Gaps = 38/413 (9%)

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAG 165
           L+  CR     E E +   M  + +AP   + S ++G +  +G ++RAL +Y        
Sbjct: 108 LLARCRV--FVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHN 165

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
            +PD +    ++N   +   V  A K+ +EM+++    D  +   ++ GLC+ + + E  
Sbjct: 166 YLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGR 225

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            L N+   +G  P+   + TL+ G+ K G++ +A  LF  +  K   P   TY  +I+G 
Sbjct: 226 KLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGL 285

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK    +  + L  +M  R +  N   Y  +++     G   E  +    +   G +P +
Sbjct: 286 CKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDI 345

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP--------------------------- 378
            + NT+I G CR G   +A+E L   +  G+ P                           
Sbjct: 346 TTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIG 405

Query: 379 --------DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
                   D ++Y  L++G V    +D A  +  KM  +G++PD   YNV++ G C++GR
Sbjct: 406 MTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGR 465

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +  ++L+L  M+ + L+ D     TL++G +    L EA +  +  + +G  P
Sbjct: 466 LSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDP 518



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 173/352 (49%), Gaps = 1/352 (0%)

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D  S S+L+ + +R             MK   L P     + ++  Y  +G V  AL++ 
Sbjct: 98  DGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELY 157

Query: 194 DEMLE-KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
               +    + DV+  N +LN L + K +  A  ++ EM++R    D Y+   ++ G CK
Sbjct: 158 HIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCK 217

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
           +  + +   L +    K   P+IV YNTL+DG+ K G++E+AN L+ ++  +   P   +
Sbjct: 218 ERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTET 277

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           YGI+ING C   +      L  EM  +G+   +   N+I+    + G   +  + L  + 
Sbjct: 278 YGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWIT 337

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
             G +PD  +YNTLI+G  R+  + +A  L+     +GL P+ ++Y  ++  +C+QG+  
Sbjct: 338 ENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCL 397

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  +   M EKG   D   Y  L++G V+   +  A    D+M++RG +PD
Sbjct: 398 RAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPD 449



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 153/316 (48%), Gaps = 14/316 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+   +  K+D AK        KG+ P  V YN +I  YC+ G + +A   +  M    
Sbjct: 491 LVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGD 550

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FTY+++I+G  K+     A ++  +M++    P+  TY +L+   CR  + S AE
Sbjct: 551 HSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAE 610

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F EM   G+ P++V+++ LIG F + G++ +A  +F  M     +P++V +  +ING 
Sbjct: 611 KTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGL 670

Query: 181 CRN-----------GFVLEALKMRD---EMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
             N              ++A  M D    M+  G    V  YN++L  LC  KM+  A  
Sbjct: 671 TNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQ 730

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L ++M  +G+FPD  +F  L++G C +G   +  N       +      V Y+  ++ F 
Sbjct: 731 LRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFL 790

Query: 287 KVGEMEKANKLWADMI 302
             G   +A+K++  ++
Sbjct: 791 PKGLTSEASKVFHTLL 806


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 243/442 (54%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L+++  L   M      P +  ++ L++ + K  + D    + ++M  +G+  +  T N 
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           LL   CR   +S A     +M + G  PDIV+F +L+  F R  ++  AL  F  M   G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+ V+Y  II+G C++  V  AL + + M   G   D VTYN++++GLC +    +A 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            + + M +R ++PD +TF  LI    K+G +++A  L++ M ++S+ PDIVTY+ LI G 
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C    +++A +++  M+S+   P+ ++Y ILINGYC    V    +L+ EM  +G+    
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+   +I+GYCR+G  + A+E    MV  GV P+ I+YN L++G      ++KA  +++ 
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M+  G+  D++TYN+I+ G C+ G + D+  +   +  KGL PD  TYT ++ G   +  
Sbjct: 422 MQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGL 481

Query: 466 LKEAFRFHDEMLQRGFVPDDAF 487
             EA     +M + G +P++ +
Sbjct: 482 RGEADALFRKMKEDGILPNECY 503



 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 211/379 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++  A  FL +M + G  PD VT+ +L+N +CR   + +A  + + M   G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN++I+GLCK  + D A ++L+ M   G+ PD  TYN+L+   C      +A 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M++R + PD+ +F+ LI    + G++  A   + EM    L PD V Y+++I G 
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA +M   M+ KGC  DVVTY+ ++NG C++K +     LF EM +RGV  + 
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI G+C+ G +N A  +F  M    + P+I+TYN L+ G C  G++EKA  + AD
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +  + ++Y I+I G C  G V +A+ L+  +  KG+ P + +   ++ G  + G 
Sbjct: 422 MQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGL 481

Query: 361 ASKADEFLSKMVSEGVDPD 379
             +AD    KM  +G+ P+
Sbjct: 482 RGEADALFRKMKEDGILPN 500



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 232/438 (52%), Gaps = 1/438 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           DS  +F   M Q    P    ++ L++A  +    +    L   M   G+   + T N L
Sbjct: 64  DSLDLFF-HMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           +N  C+  +   A   L +M+++G  PD  T+ +LL   CR + + +A  +F  M   G 
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P++V ++T+I    ++ Q+D AL     M+  G+ PD V Y  +I+G C +G   +A +
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR 242

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           M   M ++    DV T+N +++   +   ++EA++L+ EM+ R + PD  T++ LI+G C
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
               +++A  +F  M  K   PD+VTY+ LI+G+CK  ++E   KL+ +M  R +  N +
Sbjct: 303 MYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y +LI GYC  G +  A  ++  MV  G+ P +++ N ++ G C +G   KA   L+ M
Sbjct: 363 TYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
              G+D D ++YN +I G  +   +  A+ L   +  +GL PD+ TY  ++ G  ++G  
Sbjct: 423 QKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLR 482

Query: 432 HDSELILWRMIEKGLNPD 449
            +++ +  +M E G+ P+
Sbjct: 483 GEADALFRKMKEDGILPN 500



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 223/414 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D       +M+  G+  +  T N L+N +CR   L  A   +  M   G
Sbjct: 87  LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLG 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T+ SL+NG C+  R   A  + D M++MG  P+   YNT++   C+ + +  A 
Sbjct: 147 HEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNAL 206

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M   G+ PD V++++LI     +G+ D A      M    + PD   +  +I+  
Sbjct: 207 DLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDAC 266

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G + EA ++ +EM+ +    D+VTY+ ++ GLC    L EA+ +F  M+ +G FPD 
Sbjct: 267 VKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDV 326

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ LI+G+CK   +   + LF  M+Q+ +  + VTY  LI G+C+ G++  A +++  
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW 386

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + PN I+Y +L++G C  G + +A  +  +M   G+   +V+ N II+G C++G+
Sbjct: 387 MVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGE 446

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            + A +    +  +G+ PD  +Y  ++ G  ++    +A AL  KM+  G++P+
Sbjct: 447 VADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 259/486 (53%), Gaps = 5/486 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL +++ + +       M + GV P+  TYN LI A C+   +  A ++++ M+ KG
Sbjct: 133 LLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKG 192

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   ++ ++I+ LCK  R D A+ +L EM     +P  A+YN ++   C +  M E  
Sbjct: 193 CRPDEVSHTTIISALCKLDRLDEARGILAEM-----TPVGASYNAVVHALCGQFRMREVF 247

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  RG+ PD V++++++G F +  +L  A      M + G VP+   +T+++ G+
Sbjct: 248 LVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGF 307

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G V +AL M + M+ +G     ++YN ++ GLC    L  A  +F+ M +    PD 
Sbjct: 308 FDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDV 367

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI G  K G+++ A+++++ MT    KP++V Y  ++D  CK    ++A  L   
Sbjct: 368 RTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDK 427

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN +++  LI   C +G    A  +++ M   G  P   + N ++ G  R G+
Sbjct: 428 MSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGN 487

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   L++M++ G +   +SYNT I+G  +   + +A  L+ +M  QG+ PD  T+N 
Sbjct: 488 CEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNA 547

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+  +C++G +  +  +L RM       +   YT+L++G  SQ+ L +A  +  +ML  G
Sbjct: 548 IIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEG 607

Query: 481 FVPDDA 486
             P++A
Sbjct: 608 ICPNEA 613



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 251/459 (54%), Gaps = 5/459 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC++ ++ +A+  L EM +KG  PD V++ T+I+A C+   L+EA  ++  M+  G
Sbjct: 168 LIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG 227

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +YN++++ LC + R      V+DEM+  GL PDT  Y +++   C+   +  A 
Sbjct: 228 A-----SYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMAC 282

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   G  P++ +F+ L+  F  +G++  AL  +  M + G  P  + Y ++I G 
Sbjct: 283 AILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGL 342

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  AL +   M +  C+ DV TY+T+++G  +A  L  A  ++N+M   G  P+ 
Sbjct: 343 CHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNV 402

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T ++   CK    ++A NL D M+ ++  P+ +T+NTLI   C +G   +A  ++  
Sbjct: 403 VVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHG 462

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y  L++G    G+  +A R+  EM+  G + +LVS NT I G C+   
Sbjct: 463 MRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRM 522

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L +M+ +G+ PD+ ++N +I+ + +E N+  A  ++ +M+      +++ Y  
Sbjct: 523 IKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTS 582

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           +++G C Q ++ D+ + L +M+ +G+ P+ +T+  L+ G
Sbjct: 583 LMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRG 621



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 195/452 (43%), Gaps = 42/452 (9%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            + + +  L   G  D  +  L EM   G++         +    R      A + F   
Sbjct: 57  AHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRA 116

Query: 127 SRR--GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
                  AP +  ++ L+    R   +   +  +  M+ AG+ P+   Y ++I   C+N 
Sbjct: 117 RHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQND 176

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V  A +M DEM  KGC  D V++ TI++ LC+   L EA  +  EM   G      ++ 
Sbjct: 177 RVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGA-----SYN 231

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            ++H  C    M +   + D M  + ++PD V Y +++  FCK  E+  A  + A M++ 
Sbjct: 232 AVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTE 291

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              PN  ++ +L+ G+   G V +A  +W  MV +G  P+ +S N +I+G C  GD  +A
Sbjct: 292 GCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRA 351

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI-------- 416
               S M      PD  +Y+TLI+GF +  ++D A ++ + M N G  P+V+        
Sbjct: 352 LFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDV 411

Query: 417 ---------------------------TYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                                      T+N ++   C  GR   +  +   M   G  P+
Sbjct: 412 LCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPN 471

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
             TY  L++G   + N ++A R   EML  GF
Sbjct: 472 DRTYNELLHGLFREGNCEDALRMLTEMLNHGF 503



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 98/198 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC   +   A      M + G  P+  TYN L++   REG  E+A +++  M   G
Sbjct: 443 LIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHG 502

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  + +YN+ I+GLC+      A  +L  M+  G+ PD  T+N ++   C++ N+  A 
Sbjct: 503 FELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAA 562

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M       +IV++++L+       +LD A++Y  +M   G+ P+   + +++ G 
Sbjct: 563 WMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622

Query: 181 CRNGFVLEALKMRDEMLE 198
             +   +  + + D ++E
Sbjct: 623 FTHLGTIGPMHLIDHIIE 640


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 243/457 (53%), Gaps = 1/457 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV +  +  ++  A   + EM  +G+ P T T N ++      G +E A  L + M  +G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   +Y  ++ G CK G    +   L  M++ G   D AT + ++ E C K  ++ A 
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F      G+ P++++F+ +I    + G + +A     EM   G  P+   +T +I+G 
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 181 CRNGFVLEALKMRDEMLE-KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G+  +A ++  +++  +    +V+TY  +++G CR + +  A+ L + M E+G+ P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTLI GHCK GN  +A  L ++M ++   P++ TYN ++DG CK G +++A K+  
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                 +  + ++Y ILI+ +C    + +A  L+ +MV  GI+P + S  T+I  +CR  
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREK 497

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +++ F  + V  G+ P + +Y ++I G+ RE N+  A     +M + G   D ITY 
Sbjct: 498 RMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYG 557

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            +++G C+Q ++ ++  +   MIEKGL P   T  TL
Sbjct: 558 ALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTL 594



 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 235/449 (52%), Gaps = 1/449 (0%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           ++ ++   G ++EA +++  M  +GL P   T N ++  + + G  + A+ + DEM   G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           + P+  +Y  ++V  C+  N+ E++     M  RG   D  + S ++  F   G + RAL
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            YFR     GL P+ + +T +I G C+ G V +A +M +EM+ +G   +V T+  +++GL
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 216 CRAKMLTEADDLFNEMLE-RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           C+     +A  LF +++      P+  T+T +I G+C+D  MN+A  L   M ++ + P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
             TY TLIDG CK G  E+A +L   M     SPN  +Y  +++G C  G V EA+++  
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
                G+    V+   +I  +C+  +  +A    +KMV  G+ PD  SY TLI  F RE+
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREK 497

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            M ++     +    GLVP   TY  ++ G+CR+G +  +     RM + G   D  TY 
Sbjct: 498 RMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYG 557

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            LI+G   Q+ L EA   +D M+++G  P
Sbjct: 558 ALISGLCKQSKLDEARCLYDAMIEKGLTP 586



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 219/431 (50%), Gaps = 1/431 (0%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           +S K  +        ++    + GR   A E++ EM   GL+P T T N ++        
Sbjct: 123 ISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGL 182

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +  AE +F EM  RGV P+ VS+  ++  + + G +  +  +   M   G V DN   ++
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSL 242

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           I+  +C  GFV  AL       E G   +++ +  ++ GLC+   + +A ++  EM+ RG
Sbjct: 243 IVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
             P+ YT T LI G CK G   KA  LF  ++  ++ KP+++TY  +I G+C+  +M +A
Sbjct: 303 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRA 362

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L + M  + ++PN  +Y  LI+G+C  G+   A+ L   M  +G  P + + N I+ G
Sbjct: 363 EMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDG 422

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+ G   +A + L      G+D D ++Y  LI+   ++  + +A  L +KM   G+ PD
Sbjct: 423 LCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPD 482

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           + +Y  ++  FCR+ RM +SE+     +  GL P   TYT++I G+  + NL+ A +F  
Sbjct: 483 IHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFH 542

Query: 475 EMLQRGFVPDD 485
            M   G   D 
Sbjct: 543 RMSDHGCASDS 553



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 112/292 (38%), Positives = 175/292 (59%), Gaps = 6/292 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++  C+D K++ A+M L  M+++G+ P+T TY TLI+ +C+ G  E A++LMN M+ +G
Sbjct: 349 MISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEG 408

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN++++GLCKKGR   A +VL    + GL  D  TY  L+ E C++  + +A 
Sbjct: 409 FSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQAL 468

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M + G+ PDI S++TLI +F R  ++  + M+F E    GLVP N  YT +I GY
Sbjct: 469 VLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGY 528

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  ALK    M + GC  D +TY  +++GLC+   L EA  L++ M+E+G+ P  
Sbjct: 529 CREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCE 588

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC---KVG 289
            T  TL + +CK  +   A+ + + + +K     + T NTL+   C   KVG
Sbjct: 589 VTRVTLAYEYCKIDDGCSAMVVLERLEKKLW---VRTVNTLVRKLCSERKVG 637



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 233/470 (49%), Gaps = 4/470 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ++ A+    EM  +GV P+ V+Y  ++  YC+ G + E+ + +  M  +G      T + 
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSL 242

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           ++   C+KG   RA        +MGL P+   +  ++   C++ ++ +A E+  EM  RG
Sbjct: 243 IVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
             P++ + + LI    + G  ++A  ++ + ++S    P+ + YT +I+GYCR+  +  A
Sbjct: 303 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRA 362

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             +   M E+G   +  TY T+++G C+A     A +L N M E G  P+  T+  ++ G
Sbjct: 363 EMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDG 422

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK G + +A  +     +  +  D VTY  LI   CK  E+++A  L+  M+   I P+
Sbjct: 423 LCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPD 482

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             SY  LI  +C    + E+   + E V  G+ PT  +  ++I GYCR G+   A +F  
Sbjct: 483 IHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFH 542

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M   G   DSI+Y  LI+G  ++  +D+A  L   M  +GL P  +T   +   +C+  
Sbjct: 543 RMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKID 602

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
               + ++L R+ EK L     T  TL+    S+  +  A  F  ++L +
Sbjct: 603 DGCSAMVVLERL-EKKLWV--RTVNTLVRKLCSERKVGMAALFFHKLLDK 649



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 201/380 (52%), Gaps = 6/380 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           M+  LCK   +  A   L EM  +G  P+  T+  LI+  C++G+ E+AF+L +  +  +
Sbjct: 278 MIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 337

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             KP V TY ++I+G C+  + +RA+ +L  M + GL+P+T TY TL+   C+  N   A
Sbjct: 338 NHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERA 397

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M+  G +P++ +++ ++    + G++  A    +     GL  D V YTI+I+ 
Sbjct: 398 YELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISE 457

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   + +AL + ++M++ G   D+ +Y T++   CR K + E++  F E +  G+ P 
Sbjct: 458 HCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPT 517

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T++I G+C++GN+  AL  F  M+      D +TY  LI G CK  ++++A  L+ 
Sbjct: 518 NKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYD 577

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            MI + ++P  ++   L   YC +     A  +   +  K    T+   NT+++  C   
Sbjct: 578 AMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTV---NTLVRKLCSER 634

Query: 360 DASKADEFLSKMVSEGVDPD 379
               A  F  K++ +  DP+
Sbjct: 635 KVGMAALFFHKLLDK--DPN 652



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%)

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           ++  F     + +A  +V +M NQGL P   T N ++      G +  +E +   M  +G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + P+  +Y  ++ G+    N+ E+ R+   M++RGFV D+A
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNA 238


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 233/427 (54%), Gaps = 3/427 (0%)

Query: 35  TLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            +I   C EG L  A  L N M  KG+ P V T+N L+NGLCK G  ++A  ++ EML++
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G SP+ AT+NT +   C   N+ +A  +F  M+  G+ P+ V+++ LI    + G L  A
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255

Query: 155 LMYFREM---KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
                ++          D +  TI ++G  + G +++AL   DEML++G  +DVV YN +
Sbjct: 256 RKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVL 315

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++G C  + +  A   F EM +RG+ PD +T+ TLI G CK GN+++A  +  +M++   
Sbjct: 316 IHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGA 375

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            PD+++Y  +I G C  G++ +AN+    M+   + P  + + ++I+G+   G ++ A  
Sbjct: 376 APDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALS 435

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +  +MV  GI P + + N +I    + G+   A     +M+  G+ PD ++YN LI    
Sbjct: 436 IRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAAC 495

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
               +  A  L  +M  +G  PD+ITY  ++ GFC +G + ++E +L ++   GL+ D +
Sbjct: 496 NFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHA 555

Query: 452 TYTTLIN 458
            +  LI 
Sbjct: 556 PFQILIQ 562



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/420 (31%), Positives = 229/420 (54%), Gaps = 3/420 (0%)

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           ++I  LC +G+   A  + ++M+Q G+ PD  T+N L+   C+  ++ +A+ +  EM   
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G +P+  +F+T I  +  N  +D+AL  F  M ++G+ P+ V Y I+I+  C+ G + +A
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255

Query: 190 LKMRDEMLEKGC---VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            K+ +++L+  C     D++T    ++G  +   + +A   ++EML+RG   D   +  L
Sbjct: 256 RKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVL 315

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           IHG C   +MN A   F  M ++ + PDI TYNTLI GFCK+G +++A  +   M     
Sbjct: 316 IHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGA 375

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           +P+ ISY ++I G C  G V  A +    M+   + P  +  N +I G+ R GD S A  
Sbjct: 376 APDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALS 435

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
              +MVS G+ P+  +YN LI+  ++  N+  A ++  +M   G+ PDV+TYN+++   C
Sbjct: 436 IRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAAC 495

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             GR+H +  +   M+ +G  PD  TYT LI G   + ++ EA     ++ + G   D A
Sbjct: 496 NFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHA 555



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 220/405 (54%), Gaps = 3/405 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LCK   ++ A   + EM + G  P+  T+NT I  YC    +++A  L ++M+  G
Sbjct: 172 LVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSG 231

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTA--TYNTLLVESC-RKENMS 117
           + P   TYN LI+ LCKKG    A+++L+++L      +T+    +T+ ++ C +K +M 
Sbjct: 232 IGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMV 291

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A   + EM +RG   D+V+++ LI  F     ++ A  YF EM   GL+PD   Y  +I
Sbjct: 292 QALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLI 351

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G+C+ G + EA  +   M + G   D+++Y  I+ GLC    +  A+     MLE  + 
Sbjct: 352 SGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMV 411

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+   +  +I GH + G+++ AL++ D M    I P++ TYN LI    K G +  A+ +
Sbjct: 412 PEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSI 471

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M+   I P+ ++Y +LI   C+ G +  A RL+ EM+ +G +P +++   +I+G+C 
Sbjct: 472 KKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCI 531

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
            G   +A+E L+K+   G+  D   +  LI  + R     +A+ L
Sbjct: 532 RGHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAYDL 576



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 150/299 (50%), Gaps = 7/299 (2%)

Query: 191 KMRDEMLEKGCVMDVVTYNTIL-NGLCRAKMLTEADDLFNEMLERGVFP-DFYTFTTLIH 248
           K  DE  +   V +V+  + IL + L R KM+ E+  L    L       D+     +I 
Sbjct: 82  KGHDEERDPRVVFNVL--DAILKDSLERLKMMRESVSLTKIGLNGCTLEMDYTGCVAMIR 139

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
             C +G +  AL L + M QK + PD++T+N L++G CK G++EKA+ L  +M+    SP
Sbjct: 140 NLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSP 199

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N  ++   I GYC   +V +A  L+  M   GI P  V+ N +I   C+ G    A + L
Sbjct: 200 NCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLL 259

Query: 369 SKMVSEGV---DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
            K++ +       D I+    ++G +++ +M +A     +M  +G   DV+ YNV++ GF
Sbjct: 260 EKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGF 319

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C    M+ +      M ++GL PD  TY TLI+G     NL EA   H  M + G  PD
Sbjct: 320 CLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPD 378


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/465 (32%), Positives = 242/465 (52%), Gaps = 4/465 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           ++ Q G+ PDTVTYNT+I +YC+EG L  A +    +   GL+P  FT N+L+ G C+ G
Sbjct: 58  QLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTG 117

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +A  +   M  MG   +  +Y  L+   C  + + +A  +F  M R G +P++ +F+
Sbjct: 118 ELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFT 177

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI    ++G++  A + F  M   G+VP  + Y  +I GY + G + +ALK+++ M + 
Sbjct: 178 FLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKN 237

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           GC  D  TYNT++ GLC  K   EA++L N  ++ G  P   TFT LI+G+C     + A
Sbjct: 238 GCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 296

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L + + M     K D+  +  LI+   K   +++A +L  ++ +  + PN I+Y  +I+G
Sbjct: 297 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 356

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           YC  G V  A  +   M   G +P   + N+++ G  +     KA   L+KM  +G+ P+
Sbjct: 357 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 416

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y TL+ G   E + D AF L   ME  GL PD   Y V+    C+ GR  ++   + 
Sbjct: 417 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV 476

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           R   KG+   +  YTTLI+G     N   A    + M+  G  PD
Sbjct: 477 R---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 518



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 249/499 (49%), Gaps = 19/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   K D A     +M       D   +  LIN+  ++  L+EA +L+N +S  G
Sbjct: 283 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 342

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY S+I+G CK G+ D A EVL  M + G  P+  TYN+L+    + + + +A 
Sbjct: 343 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 402

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M + G+ P++++++TL+         D A   F  M+  GL PD   Y ++ +  
Sbjct: 403 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 462

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   EA      ++ KG  +  V Y T+++G  +A     A  L   M++ G  PD 
Sbjct: 463 CKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 519

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT++ L+H  CK   +N+AL + D M+ + IK  I  Y  LID   + G+ + A +++ +
Sbjct: 520 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 579

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    P+  +Y + IN YC  G + +A  L  +M  +G+ P +V+ N +I G    G 
Sbjct: 580 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 639

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLIN-------GFVREEN---------MDKAFALVS 404
             +A   L +MV    +P+  +Y  L+         +VR  +         +D  + L+ 
Sbjct: 640 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 699

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M   GL P V TY+ ++ GFC+ GR+ ++ L+L  M  KGL+P+   YT LI       
Sbjct: 700 RMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTK 759

Query: 465 NLKEAFRFHDEMLQRGFVP 483
             ++A  F   M + GF P
Sbjct: 760 FFEKALSFVSIMSECGFQP 778



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 162/568 (28%), Positives = 262/568 (46%), Gaps = 84/568 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  A++    M Q GV P  +TYN +I  Y + G + +A ++   M   G
Sbjct: 179 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 238

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +TYN+LI GLC + + + A+E+L+  ++ G +P   T+  L+   C  E   +A 
Sbjct: 239 CHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 297

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M       D+  F  LI    +  +L  A     E+ + GLVP+ + YT II+GY
Sbjct: 298 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 357

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V  AL++   M   GC  +  TYN+++ GL + K L +A  L  +M + G+ P+ 
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 417

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD-------------------------- 274
            T+TTL+ G C + + + A  LF++M Q  +KPD                          
Sbjct: 418 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 477

Query: 275 ------IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                  V Y TLIDGF K G  + A  L   MI    +P+  +Y +L++  C    + E
Sbjct: 478 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNE 537

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +  +M  +GIK T+ +   +I    R G    A    ++M S G  P + +Y   IN
Sbjct: 538 ALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFIN 597

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS-------------- 434
            + +E  ++ A  L+ KME +G+ PDV+TYN+++ G    G +  +              
Sbjct: 598 SYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 657

Query: 435 --------------------------------EL-ILW----RMIEKGLNPDRSTYTTLI 457
                                           EL I W    RM++ GLNP  +TY++LI
Sbjct: 658 NYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 717

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            G      L+EA    D M  +G  P++
Sbjct: 718 AGFCKAGRLEEACLLLDHMCGKGLSPNE 745



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 157/519 (30%), Positives = 256/519 (49%), Gaps = 41/519 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEA---FQLMNSMS 57
           M+ + CK+  + +A  +   + + G+ P+T T N L+  YCR G L +A   F +M  M 
Sbjct: 74  MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 133

Query: 58  GK--------------------------------GLKPGVFTYNSLINGLCKKGRCDRAK 85
            +                                G  P V  +  LI+GLCK GR   A+
Sbjct: 134 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 193

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GI 144
            + D M Q G+ P   TYN ++V   +   M++A +I   M + G  PD  +++TLI G+
Sbjct: 194 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 253

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             +  +    L+        G  P  V +T +INGYC      +AL+M+++M+   C +D
Sbjct: 254 CDQKTEEAEELL--NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 311

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +  +  ++N L +   L EA +L NE+   G+ P+  T+T++I G+CK G ++ AL +  
Sbjct: 312 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 371

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M +   +P+  TYN+L+ G  K  ++ KA  L   M    I PN I+Y  L+ G C   
Sbjct: 372 MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 431

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               AFRL+  M   G+KP   +   +    C++G A +A  F+   V +GV    + Y 
Sbjct: 432 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYT 488

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI+GF +  N D A  L+ +M ++G  PD  TY+V+L   C+Q R++++  IL +M  +
Sbjct: 489 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 548

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+      YT LI+  + +     A R ++EM   G  P
Sbjct: 549 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKP 587



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 251/484 (51%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC    +  A +    M++ G  P+   +  LI+  C+ G + +A  L ++M   G
Sbjct: 144 LIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNG 203

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN++I G  K GR + A ++ + M + G  PD  TYNTL+   C ++   EAE
Sbjct: 204 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAE 262

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+     + G  P +V+F+ LI  +    + D AL    +M S+    D  ++  +IN  
Sbjct: 263 ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 322

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + EA ++ +E+   G V +V+TY +I++G C++  +  A ++   M   G  P+ 
Sbjct: 323 IKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNA 382

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +L++G  KD  ++KA+ L   M +  I P+++TY TL+ G C   + + A +L+  
Sbjct: 383 WTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM 442

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + P+  +Y +L +  C  G   EA+     +V KG+  T V   T+I G+ ++G+
Sbjct: 443 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGN 499

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   + +M+ EG  PDS +Y+ L++   +++ +++A  ++ +M  +G+   +  Y +
Sbjct: 500 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 559

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    R+G+   ++ +   M   G  P  +TYT  IN +  +  L++A     +M + G
Sbjct: 560 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 619

Query: 481 FVPD 484
             PD
Sbjct: 620 VAPD 623



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 250/527 (47%), Gaps = 48/527 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+L K  ++  AK  L E+   G+ P+ +TY ++I+ YC+ G ++ A +++  M   G
Sbjct: 318 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 377

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM---- 116
            +P  +TYNSL+ GL K  +  +A  +L +M + G+ P+  TY TLL   C + +     
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437

Query: 117 ----------------------------SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
                                         AEE +  + R+GVA   V ++TLI  FS+ 
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 497

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G  D A      M   G  PD+  Y+++++  C+   + EAL + D+M  +G    +  Y
Sbjct: 498 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 557

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
             +++ + R      A  ++NEM   G  P   T+T  I+ +CK+G +  A +L   M +
Sbjct: 558 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 617

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI----------- 317
           + + PD+VTYN LIDG   +G +++A      M+     PNY +Y +L+           
Sbjct: 618 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 677

Query: 318 -----NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
                +G  ++  +   ++L   MV  G+ PT+ + +++I G+C++G   +A   L  M 
Sbjct: 678 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 737

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            +G+ P+   Y  LI      +  +KA + VS M   G  P + +Y +++ G C +G   
Sbjct: 738 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFE 797

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             + +   ++E G N D   +  L +G +    +   F+    M +R
Sbjct: 798 KVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 844



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 227/441 (51%), Gaps = 3/441 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN  + +  R    E   ++ + +   GL P   TYN++I   CK+G    A      +L
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           + GL P+T T N L++  CR   + +A  +F  M   G   +  S++ LI        + 
Sbjct: 96  EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           +AL+ F  MK  G  P+   +T +I+G C++G V +A  + D M + G V  V+TYN ++
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            G  +   + +A  +   M + G  PD +T+ TLI+G C D    +A  L +   ++   
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFT 274

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P +VT+  LI+G+C   + + A ++   M+S K   +   +G LIN       + EA  L
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             E+   G+ P +++  +II GYC+SG    A E L  M  +G  P++ +YN+L+ G V+
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-GLNPDRS 451
           ++ + KA AL++KM+  G++P+VITY  +L G C +    D+   L+ M+E+ GL PD  
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDF-DNAFRLFEMMEQNGLKPDEH 453

Query: 452 TYTTLINGHVSQNNLKEAFRF 472
            Y  L +        +EA+ F
Sbjct: 454 AYAVLTDALCKAGRAEEAYSF 474



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 222/438 (50%), Gaps = 1/438 (0%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           +A Q +       L      YN  +  L +    +    V  +++Q GL PDT TYNT++
Sbjct: 16  DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 75

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
              C++ +++ A   F  +   G+ P+  + + L+  + R G+L +A   F  M   G  
Sbjct: 76  KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 135

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
            +   YTI+I G C    V +AL +   M   GC  +V  +  +++GLC++  + +A  L
Sbjct: 136 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 195

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           F+ M + GV P   T+  +I G+ K G MN AL + ++M +    PD  TYNTLI G C 
Sbjct: 196 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 255

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
             + E+A +L  + +    +P  +++  LINGYC      +A R+  +M+    K  L  
Sbjct: 256 -QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 314

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              +I    +     +A E L+++ + G+ P+ I+Y ++I+G+ +   +D A  ++  ME
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 374

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             G  P+  TYN ++ G  +  ++H +  +L +M + G+ P+  TYTTL+ G   +++  
Sbjct: 375 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 434

Query: 468 EAFRFHDEMLQRGFVPDD 485
            AFR  + M Q G  PD+
Sbjct: 435 NAFRLFEMMEQNGLKPDE 452



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 212/470 (45%), Gaps = 50/470 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L KD K+  A   L +M++ G+ P+ +TY TL+   C E   + AF+L   M   G
Sbjct: 388 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 447

Query: 61  LKPGVFTYNSLINGLCKKGRC--------------------------------DRAKEVL 88
           LKP    Y  L + LCK GR                                 D A  ++
Sbjct: 448 LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 507

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           + M+  G +PD+ TY+ LL   C+++ ++EA  I  +MS RG+   I +++ LI    R 
Sbjct: 508 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 567

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+ D A   + EM S+G  P    YT+ IN YC+ G + +A  +  +M  +G   DVVTY
Sbjct: 568 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 627

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM------------ 256
           N +++G      +  A      M+     P+++T+  L+  H   GN+            
Sbjct: 628 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK-HLLKGNLAYVRSVDTSGMW 686

Query: 257 -----NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
                +    L + M +  + P + TY++LI GFCK G +E+A  L   M  + +SPN  
Sbjct: 687 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 746

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y +LI   C      +A      M   G +P L S   ++ G C  GD  K       +
Sbjct: 747 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 806

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           +  G + D +++  L +G ++   +D  F ++S ME +       TY ++
Sbjct: 807 LELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 856



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 51/369 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K    D A   +  M  +G  PD+ TY+ L++A C++  L EA  +++ MS +G
Sbjct: 490 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 549

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  +F Y  LI+ + ++G+ D AK + +EM   G  P   TY   +   C++  + +AE
Sbjct: 550 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 609

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---------------- 164
           ++  +M R GVAPD+V+++ LI      G +DRA    + M  A                
Sbjct: 610 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 669

Query: 165 -----------------------------------GLVPDNVLYTIIINGYCRNGFVLEA 189
                                              GL P    Y+ +I G+C+ G + EA
Sbjct: 670 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 729

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             + D M  KG   +   Y  ++   C  K   +A    + M E G  P   ++  L+ G
Sbjct: 730 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 789

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C +G+  K  +LF  + +     D V +  L DG  K G ++   ++ + M  R    +
Sbjct: 790 LCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCIS 849

Query: 310 YISYGILIN 318
             +Y ++ N
Sbjct: 850 SQTYALVTN 858



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 56/285 (19%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAF----------- 50
           +N+ CK+ +++ A+  + +ME++GV PD VTYN LI+     G+++ AF           
Sbjct: 596 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASC 655

Query: 51  ----------------------------------------QLMNSMSGKGLKPGVFTYNS 70
                                                   QL+  M   GL P V TY+S
Sbjct: 656 EPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSS 715

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI G CK GR + A  +LD M   GLSP+   Y  L+   C  +   +A      MS  G
Sbjct: 716 LIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECG 775

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P + S+  L+      G  ++    F ++   G   D V + I+ +G  + G+V    
Sbjct: 776 FQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICF 835

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +M   M ++ C +   TY  + N     KM   +  L +E+ E  
Sbjct: 836 QMLSIMEKRYCCISSQTYALVTN-----KMHEVSSSLVSEVREEA 875


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 256/542 (47%), Gaps = 60/542 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LC+  +   A + L  M +  + PD  TYNTLIN +  EG +  A  + N M  + 
Sbjct: 298 MIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQT 357

Query: 61  LKPGVFTYNSLINGLCKKGRCDRA--------------------KEVLDEMLQMGLSPDT 100
             P V TY ++I+G C+  R D+A                    K++L  ML+ G+ PD 
Sbjct: 358 FVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDI 417

Query: 101 ATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE 160
            TY+ L+ E      ++EAE     MSR  ++ D VSF+ +I  +   G +  A   +  
Sbjct: 418 VTYSALINEGM----ITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDA 473

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM 220
           M   G  P+   Y  ++ G C+ G +++A +    +L+    +D  T+N +L G+C+   
Sbjct: 474 MVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGT 533

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY-- 278
           L EA DL  +M++    PD +T+T L+ G C+ G +  AL +  +M  K + PD V Y  
Sbjct: 534 LDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTC 593

Query: 279 ----------------------------------NTLIDGFCKVGEMEKANKLWADMISR 304
                                             N+L++G+ K G +    ++ +DM   
Sbjct: 594 LLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQS 653

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
           ++ PN  SY IL++GY   G  +++  L+  MV KGI+P  V+   +I G    G    A
Sbjct: 654 EVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIA 713

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            +FL KMV EG+ PD + ++ LI  F  +  M  A  L + M+   + P   TY+ ++ G
Sbjct: 714 VKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMING 773

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             R+  +  S  +L  M++ GL P+ + Y  L+N       +  AFR  +EM   G VP 
Sbjct: 774 LIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPA 833

Query: 485 DA 486
           D 
Sbjct: 834 DV 835



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 245/484 (50%), Gaps = 1/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+   +  AK F+  +       D  T+N L+   C+ G L+EA  L   M    
Sbjct: 489 LLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNN 548

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY  L++G C+KG+   A  +L  ML  G+ PDT  Y  LL     +  +  A 
Sbjct: 549 CLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAAS 608

Query: 121 EIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +F E+  + G+  D +++++L+  + + G ++       +M  + + P++  Y I+++G
Sbjct: 609 YVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHG 668

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y + G   ++L +   M+ KG   D VTY  ++ GL    ++  A     +M+  G+FPD
Sbjct: 669 YVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 728

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F  LI    +   M+ AL LF+ M    + P   TY+ +I+G  +   +++++++  
Sbjct: 729 RLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLR 788

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+   + PN+  Y  L+N  C +G +  AFRL  EM   GI P  V+ ++II+G C+ G
Sbjct: 789 EMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCG 848

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A    S M+  G+ P   ++ TL++   +E  +  A  L   ME+  L  DV++YN
Sbjct: 849 KLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYN 908

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++TG C+  R+ D+  +   M  KGL P+ +TY TL     S   ++      +++ +R
Sbjct: 909 VLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEER 968

Query: 480 GFVP 483
           G +P
Sbjct: 969 GLIP 972



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 241/485 (49%), Gaps = 21/485 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V A  K+ K+  A + +  M+  G     +  NT++ A   +G  +  +  +       
Sbjct: 159 LVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESLAHN 218

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V T N L+N LC  G   +A+++L +M    LS ++ TYNT+L    +K     A 
Sbjct: 219 FPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLS-NSVTYNTILHWYVKKGRFKAAL 277

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M R  +  DI +++ +I    R  +  RA +  + M+   L+PD   Y  +ING+
Sbjct: 278 CVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGF 337

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G +  A  + + ML +  V  V TY T+++G CR + + +A  + +EM   GV P  
Sbjct: 338 FGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMP-- 395

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                          ++KA  +   M +  I PDIVTY+ LI+     G + +A      
Sbjct: 396 -------------SEISKAKQILKSMLEDGIDPDIVTYSALINE----GMITEAEHFRQY 438

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   KIS + +S+  +I+ YC  G++ EAF ++  MV  G  P + +   +++G C+ G 
Sbjct: 439 MSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGH 498

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +F+  ++      D  ++N L+ G  +   +D+A  L  KM     +PD+ TY +
Sbjct: 499 LVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTI 558

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA-FRFHDEMLQR 479
           +L+GFCR+G++  + ++L  M++KG+ PD   YT L+NG +++  +K A + F + + + 
Sbjct: 559 LLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 618

Query: 480 GFVPD 484
           G   D
Sbjct: 619 GLYAD 623



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 179/346 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   K   I++ K  + +M Q  VYP++ +YN L++ Y + G   ++  L   M  KG
Sbjct: 630 LMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKG 689

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   TY  LI GL + G  D A + L++M+  G+ PD   ++ L+     K  M  A 
Sbjct: 690 IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNAL 749

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M    ++P   ++S +I    R   LD++    REM   GL P++  Y  ++N  
Sbjct: 750 QLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAK 809

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  A ++++EM   G V   V  ++I+ GLC+   L EA  +F+ M+  G+ P  
Sbjct: 810 CRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTV 869

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TFTTL+H  CK+  +  AL+L  +M    +K D+V+YN LI G CK   +  A  L+ +
Sbjct: 870 ATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEE 929

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           M S+ + PN  +Y  L     S G +     L  ++  +G+ P  V
Sbjct: 930 MKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIPVYV 975



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 206/444 (46%), Gaps = 42/444 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +++  C+  KI  A + L  M  KGV PDTV Y  L+N    EG ++ A  +   +  K 
Sbjct: 559 LLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 618

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL      YNSL+NG  K G  +  K ++ +M Q  + P++A+YN L+    +    S++
Sbjct: 619 GLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKS 678

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++  M R+G+ PD V++  LI   S  G +D A+ +  +M   G+ PD +++ I+I  
Sbjct: 679 LYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITA 738

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +     +  AL++ + M          TY+ ++NGL R   L ++ ++  EML+ G+ P+
Sbjct: 739 FSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPN 798

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  L++  C+ G +++A  L + M    I P  V  +++I G CK G++E+A  +++
Sbjct: 799 HTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFS 858

Query: 300 DMISRKISP-----------------------------------NYISYGILINGYCSMG 324
            M+   + P                                   + +SY +LI G C   
Sbjct: 859 TMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDK 918

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +++A  L+ EM  KG+ P + +  T+      +G     +E L  +   G+ P  +   
Sbjct: 919 RISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIPVYVQLE 978

Query: 385 TLINGFVREENMDKAFALVSKMEN 408
            L      E  M+ A   ++ + N
Sbjct: 979 NL------ERQMEDAIRRLNMIRN 996



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 192/446 (43%), Gaps = 46/446 (10%)

Query: 49  AFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           A ++++S+  + GL    + Y   +  L +     +A  VL  +  MG S  TA + +LL
Sbjct: 84  ALKILSSIVERSGLDRITYIYCMAVPILIQAQMHSQAMSVLRRLAVMGFSC-TAIFTSLL 142

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
                             +  R  + + V F  L+  + +  ++  A +    M   G  
Sbjct: 143 -----------------RIISRFDSTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFK 185

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
              +    I+      G          E L     +DV T N +LN LC      +A+D+
Sbjct: 186 ASPIACNTILRALVEQGESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDM 245

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
             +M +     +  T+ T++H + K G    AL + + M + SI  DI TYN +ID  C+
Sbjct: 246 LQKM-KTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCR 304

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
           +    +A  L   M    + P+  +Y  LING+   G +  A  ++  M+ +   P++ +
Sbjct: 305 IKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVAT 364

Query: 348 CNTIIKGYCRS--------------------GDASKADEFLSKMVSEGVDPDSISYNTLI 387
             T+I GYCR+                     + SKA + L  M+ +G+DPD ++Y+ LI
Sbjct: 365 YTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALI 424

Query: 388 N-GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           N G + E    + +     M    +  D +++N I+  +C +G + ++  +   M+  G 
Sbjct: 425 NEGMITEAEHFRQY-----MSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGH 479

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRF 472
           +P+  TY  L+ G     +L +A +F
Sbjct: 480 SPNVCTYQNLLRGLCQGGHLVQAKQF 505



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 22/300 (7%)

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNG--LCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
           ALK+   ++E+   +D +TY   +    L +A+M ++A  +   +   G F     FT+L
Sbjct: 84  ALKILSSIVERSG-LDRITYIYCMAVPILIQAQMHSQAMSVLRRLAVMG-FSCTAIFTSL 141

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           +    +  + N  +  F+++ +  +K        ++D    V        L+ D    K 
Sbjct: 142 LRIISRFDSTNHVV--FELLVKAYVKE-----RKVLDAAVAV--------LFMDDCGFKA 186

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           SP  I+   ++      G     +    E +       + +CN ++   C +G+  KA++
Sbjct: 187 SP--IACNTILRALVEQGESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAED 244

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            L KM +  +  +S++YNT+++ +V++     A  ++  ME   +  D+ TYN+++   C
Sbjct: 245 MLQKMKTCRLS-NSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLC 303

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           R  R   + L+L RM +  L PD  TY TLING   +  +  A    + ML++ FVP  A
Sbjct: 304 RIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVA 363



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 1/244 (0%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            F  L+  + K+  +  A      M     K   +  NT++    + GE +       + 
Sbjct: 155 VFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRES 214

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           ++     +  +  IL+N  C+ G   +A  +  +M    +  + V+ NTI+  Y + G  
Sbjct: 215 LAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNS-VTYNTILHWYVKKGRF 273

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A   L  M  + +  D  +YN +I+   R +   +AF L+ +M    L+PD  TYN +
Sbjct: 274 KAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTL 333

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + GF  +G+++ +  +   M+ +   P  +TYTT+I+G+     + +A     EM   G 
Sbjct: 334 INGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGV 393

Query: 482 VPDD 485
           +P +
Sbjct: 394 MPSE 397


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/465 (32%), Positives = 242/465 (52%), Gaps = 4/465 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           ++ Q G+ PDTVTYNT+I +YC+EG L  A +    +   GL+P  FT N+L+ G C+ G
Sbjct: 173 QLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTG 232

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +A  +   M  MG   +  +Y  L+   C  + + +A  +F  M R G +P++ +F+
Sbjct: 233 ELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFT 292

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI    ++G++  A + F  M   G+VP  + Y  +I GY + G + +ALK+++ M + 
Sbjct: 293 FLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKN 352

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           GC  D  TYNT++ GLC  K   EA++L N  ++ G  P   TFT LI+G+C     + A
Sbjct: 353 GCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 411

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L + + M     K D+  +  LI+   K   +++A +L  ++ +  + PN I+Y  +I+G
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 471

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           YC  G V  A  +   M   G +P   + N+++ G  +     KA   L+KM  +G+ P+
Sbjct: 472 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 531

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y TL+ G   E + D AF L   ME  GL PD   Y V+    C+ GR  ++   + 
Sbjct: 532 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV 591

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           R   KG+   +  YTTLI+G     N   A    + M+  G  PD
Sbjct: 592 R---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 633



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 249/499 (49%), Gaps = 19/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   K D A     +M       D   +  LIN+  ++  L+EA +L+N +S  G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V TY S+I+G CK G+ D A EVL  M + G  P+  TYN+L+    + + + +A 
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 517

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M + G+ P++++++TL+         D A   F  M+  GL PD   Y ++ +  
Sbjct: 518 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   EA      ++ KG  +  V Y T+++G  +A     A  L   M++ G  PD 
Sbjct: 578 CKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT++ L+H  CK   +N+AL + D M+ + IK  I  Y  LID   + G+ + A +++ +
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    P+  +Y + IN YC  G + +A  L  +M  +G+ P +V+ N +I G    G 
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLIN-------GFVREEN---------MDKAFALVS 404
             +A   L +MV    +P+  +Y  L+         +VR  +         +D  + L+ 
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 814

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M   GL P V TY+ ++ GFC+ GR+ ++ L+L  M  KGL+P+   YT LI       
Sbjct: 815 RMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTK 874

Query: 465 NLKEAFRFHDEMLQRGFVP 483
             ++A  F   M + GF P
Sbjct: 875 FFEKALSFVSIMSECGFQP 893



 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 162/568 (28%), Positives = 261/568 (45%), Gaps = 84/568 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  ++  A++    M Q GV P  +TYN +I  Y + G + +A ++   M   G
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 353

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +TYN+LI GLC + + + A+E+L+  ++ G +P   T+  L+   C  E   +A 
Sbjct: 354 CHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M       D+  F  LI    +  +L  A     E+ + GLVP+ + YT II+GY
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V  AL++   M   GC  +  TYN+++ GL + K L +A  L  +M + G+ P+ 
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD-------------------------- 274
            T+TTL+ G C + + + A  LF++M Q  +KPD                          
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 592

Query: 275 ------IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                  V Y TLIDGF K G  + A  L   MI    +P+  +Y +L++  C    + E
Sbjct: 593 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNE 652

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +  +M  +GIK T+ +   +I    R G    A    ++M S G  P + +Y   IN
Sbjct: 653 ALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFIN 712

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTG----------FCRQGRMHDSEL-- 436
            + +E  ++ A  L+ KME +G+ PDV+TYN+++ G          F    RM  +    
Sbjct: 713 SYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 772

Query: 437 -----------------------------------ILW----RMIEKGLNPDRSTYTTLI 457
                                              I W    RM++ GLNP  +TY++LI
Sbjct: 773 NYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 832

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            G      L+EA    D M  +G  P++
Sbjct: 833 AGFCKAGRLEEACLLLDHMCGKGLSPNE 860



 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 157/519 (30%), Positives = 256/519 (49%), Gaps = 41/519 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEA---FQLMNSMS 57
           M+ + CK+  + +A  +   + + G+ P+T T N L+  YCR G L +A   F +M  M 
Sbjct: 189 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248

Query: 58  GK--------------------------------GLKPGVFTYNSLINGLCKKGRCDRAK 85
            +                                G  P V  +  LI+GLCK GR   A+
Sbjct: 249 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GI 144
            + D M Q G+ P   TYN ++V   +   M++A +I   M + G  PD  +++TLI G+
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             +  +    L+        G  P  V +T +INGYC      +AL+M+++M+   C +D
Sbjct: 369 CDQKTEEAEELL--NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +  +  ++N L +   L EA +L NE+   G+ P+  T+T++I G+CK G ++ AL +  
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 486

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M +   +P+  TYN+L+ G  K  ++ KA  L   M    I PN I+Y  L+ G C   
Sbjct: 487 MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 546

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               AFRL+  M   G+KP   +   +    C++G A +A  F+   V +GV    + Y 
Sbjct: 547 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYT 603

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI+GF +  N D A  L+ +M ++G  PD  TY+V+L   C+Q R++++  IL +M  +
Sbjct: 604 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+      YT LI+  + +     A R ++EM   G  P
Sbjct: 664 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKP 702



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 251/484 (51%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC    +  A +    M++ G  P+   +  LI+  C+ G + +A  L ++M   G
Sbjct: 259 LIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNG 318

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN++I G  K GR + A ++ + M + G  PD  TYNTL+   C ++   EAE
Sbjct: 319 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAE 377

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+     + G  P +V+F+ LI  +    + D AL    +M S+    D  ++  +IN  
Sbjct: 378 ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 437

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + EA ++ +E+   G V +V+TY +I++G C++  +  A ++   M   G  P+ 
Sbjct: 438 IKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNA 497

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ +L++G  KD  ++KA+ L   M +  I P+++TY TL+ G C   + + A +L+  
Sbjct: 498 WTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM 557

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + P+  +Y +L +  C  G   EA+     +V KG+  T V   T+I G+ ++G+
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGN 614

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   + +M+ EG  PDS +Y+ L++   +++ +++A  ++ +M  +G+   +  Y +
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    R+G+   ++ +   M   G  P  +TYT  IN +  +  L++A     +M + G
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734

Query: 481 FVPD 484
             PD
Sbjct: 735 VAPD 738



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 250/527 (47%), Gaps = 48/527 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+L K  ++  AK  L E+   G+ P+ +TY ++I+ YC+ G ++ A +++  M   G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM---- 116
            +P  +TYNSL+ GL K  +  +A  +L +M + G+ P+  TY TLL   C + +     
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 117 ----------------------------SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
                                         AEE +  + R+GVA   V ++TLI  FS+ 
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 612

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G  D A      M   G  PD+  Y+++++  C+   + EAL + D+M  +G    +  Y
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
             +++ + R      A  ++NEM   G  P   T+T  I+ +CK+G +  A +L   M +
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI----------- 317
           + + PD+VTYN LIDG   +G +++A      M+     PNY +Y +L+           
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792

Query: 318 -----NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
                +G  ++  +   ++L   MV  G+ PT+ + +++I G+C++G   +A   L  M 
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 852

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            +G+ P+   Y  LI      +  +KA + VS M   G  P + +Y +++ G C +G   
Sbjct: 853 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFE 912

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             + +   ++E G N D   +  L +G +    +   F+    M +R
Sbjct: 913 KVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 227/441 (51%), Gaps = 3/441 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN  + +  R    E   ++ + +   GL P   TYN++I   CK+G    A      +L
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           + GL P+T T N L++  CR   + +A  +F  M   G   +  S++ LI        + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           +AL+ F  MK  G  P+   +T +I+G C++G V +A  + D M + G V  V+TYN ++
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            G  +   + +A  +   M + G  PD +T+ TLI+G C D    +A  L +   ++   
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFT 389

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P +VT+  LI+G+C   + + A ++   M+S K   +   +G LIN       + EA  L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             E+   G+ P +++  +II GYC+SG    A E L  M  +G  P++ +YN+L+ G V+
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-GLNPDRS 451
           ++ + KA AL++KM+  G++P+VITY  +L G C +    D+   L+ M+E+ GL PD  
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDF-DNAFRLFEMMEQNGLKPDEH 568

Query: 452 TYTTLINGHVSQNNLKEAFRF 472
            Y  L +        +EA+ F
Sbjct: 569 AYAVLTDALCKAGRAEEAYSF 589



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 222/438 (50%), Gaps = 1/438 (0%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           +A Q +       L      YN  +  L +    +    V  +++Q GL PDT TYNT++
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
              C++ +++ A   F  +   G+ P+  + + L+  + R G+L +A   F  M   G  
Sbjct: 191 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
            +   YTI+I G C    V +AL +   M   GC  +V  +  +++GLC++  + +A  L
Sbjct: 251 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           F+ M + GV P   T+  +I G+ K G MN AL + ++M +    PD  TYNTLI G C 
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 370

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
             + E+A +L  + +    +P  +++  LINGYC      +A R+  +M+    K  L  
Sbjct: 371 -QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              +I    +     +A E L+++ + G+ P+ I+Y ++I+G+ +   +D A  ++  ME
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
             G  P+  TYN ++ G  +  ++H +  +L +M + G+ P+  TYTTL+ G   +++  
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 468 EAFRFHDEMLQRGFVPDD 485
            AFR  + M Q G  PD+
Sbjct: 550 NAFRLFEMMEQNGLKPDE 567



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 212/470 (45%), Gaps = 50/470 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L KD K+  A   L +M++ G+ P+ +TY TL+   C E   + AF+L   M   G
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 562

Query: 61  LKPGVFTYNSLINGLCKKGRC--------------------------------DRAKEVL 88
           LKP    Y  L + LCK GR                                 D A  ++
Sbjct: 563 LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 622

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           + M+  G +PD+ TY+ LL   C+++ ++EA  I  +MS RG+   I +++ LI    R 
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+ D A   + EM S+G  P    YT+ IN YC+ G + +A  +  +M  +G   DVVTY
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM------------ 256
           N +++G      +  A      M+     P+++T+  L+  H   GN+            
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK-HLLKGNLAYVRSVDTSGMW 801

Query: 257 -----NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
                +    L + M +  + P + TY++LI GFCK G +E+A  L   M  + +SPN  
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 861

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            Y +LI   C      +A      M   G +P L S   ++ G C  GD  K       +
Sbjct: 862 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 921

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           +  G + D +++  L +G ++   +D  F ++S ME +       TY ++
Sbjct: 922 LELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 971



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 51/369 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K    D A   +  M  +G  PD+ TY+ L++A C++  L EA  +++ MS +G
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  +F Y  LI+ + ++G+ D AK + +EM   G  P   TY   +   C++  + +AE
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---------------- 164
           ++  +M R GVAPD+V+++ LI      G +DRA    + M  A                
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784

Query: 165 -----------------------------------GLVPDNVLYTIIINGYCRNGFVLEA 189
                                              GL P    Y+ +I G+C+ G + EA
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             + D M  KG   +   Y  ++   C  K   +A    + M E G  P   ++  L+ G
Sbjct: 845 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 904

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C +G+  K  +LF  + +     D V +  L DG  K G ++   ++ + M  R    +
Sbjct: 905 LCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCIS 964

Query: 310 YISYGILIN 318
             +Y ++ N
Sbjct: 965 SQTYALVTN 973



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 56/285 (19%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAF----------- 50
           +N+ CK+ +++ A+  + +ME++GV PD VTYN LI+     G+++ AF           
Sbjct: 711 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASC 770

Query: 51  ----------------------------------------QLMNSMSGKGLKPGVFTYNS 70
                                                   QL+  M   GL P V TY+S
Sbjct: 771 EPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSS 830

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI G CK GR + A  +LD M   GLSP+   Y  L+   C  +   +A      MS  G
Sbjct: 831 LIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECG 890

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P + S+  L+      G  ++    F ++   G   D V + I+ +G  + G+V    
Sbjct: 891 FQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICF 950

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +M   M ++ C +   TY  + N     KM   +  L +E+ E  
Sbjct: 951 QMLSIMEKRYCCISSQTYALVTN-----KMHEVSSSLVSEVREEA 990


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/521 (29%), Positives = 259/521 (49%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCK +++D A     ++EQ    P    YNT+I  Y   G  +EA+ L+     KG
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365

Query: 61  LKPGVF----------------------------------TYNSLINGLCKKGRCDRAKE 86
             P V                                   TYN LI+ LC++G+ + A E
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALE 425

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           + D+M + GL P+  T N ++   C+ + + EA  IF  M  +   P+ V+FS+LI    
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + G++D A   + +M   G VP  ++YT +I  + + G   +  K+  EM+  GC  D+ 
Sbjct: 486 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 545

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
             NT ++ + +A    +   LF E+   G  PD  +++ LIHG  K G  N+   LF  M
Sbjct: 546 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 605

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++    D   YN +IDGFCK G++ KA +L  +M  +   P  ++YG +I+G   +  +
Sbjct: 606 KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRL 665

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA+ L+ E    GIK  +V  +++I G+ + G   +A   + +++ +G+ P+  ++N L
Sbjct: 666 DEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 725

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-G 445
           ++  V+ E +++A      M++    P+ ITY++++ G CR  R  +   + W+ ++K G
Sbjct: 726 LDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV-RKFNKAFVFWQEMQKLG 784

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L P+  TYTT+I+G     N+ EA          G +PD A
Sbjct: 785 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSA 825



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 244/469 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC++ K+++A     +ME+ G++P+ +T N +I+  C+   LEEA  +   M  K 
Sbjct: 410 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 469

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T++SLI+GL K GR D A  + ++ML  G  P    Y +L+    +     +  
Sbjct: 470 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 529

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ EM   G +PD+   +T +    + G+ ++    FRE+ + G +PD   Y+I+I+G 
Sbjct: 530 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 589

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   E  ++   M E+GCV+D   YN +++G C++  + +A  L  EM  +G  P  
Sbjct: 590 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 649

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I G  K   +++A  LF+      IK ++V Y++LIDGF KVG +++A  +  +
Sbjct: 650 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + ++PN  ++  L++       + EA   +  M      P  ++ + +I G CR   
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 769

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M   G+ P++I+Y T+I+G  +  N+ +A  L S+ +  G +PD  +YN 
Sbjct: 770 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 829

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++ G     +  D+  +      KG N    T   L++       L++A
Sbjct: 830 MIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/518 (24%), Positives = 241/518 (46%), Gaps = 36/518 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  + ++ + D  +  L EM   G  P +     L+    +   L EAF ++ +M    
Sbjct: 131 LLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFK 190

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P    Y  LI  L +    D    +  +M ++G   +   + TL+    R+  +  A 
Sbjct: 191 FRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAAL 250

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM    +  DIV ++  I  F + G++D +  +F EMKS GL+PD+V YT +I   
Sbjct: 251 SLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVL 310

Query: 181 CRNGFVLEALKMRDEMLE-----------------------------------KGCVMDV 205
           C+   + EA+++ +++ +                                   KG +  V
Sbjct: 311 CKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSV 370

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           + YN IL  L + + + EA  +F EM +R   P+  T+  LI   C++G +N AL + D 
Sbjct: 371 IAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDD 429

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +  + P+++T N +ID  CK  ++E+A  ++  M  +  +PN +++  LI+G    G 
Sbjct: 430 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 489

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A+ L+ +M+  G  P  +   ++I+ + + G      +   +MV  G  PD    NT
Sbjct: 490 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 549

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
            ++   +    +K  AL  ++   G +PD  +Y++++ G  + G  +++  + + M E+G
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
              D   Y  +I+G      + +A++  +EM  +G  P
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPP 647



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 201/418 (48%), Gaps = 1/418 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            YNSL+  + +    D  + +L+EM   G  P +     L+    +   + EA +I   M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            +    P   +++ LIG  S   + D  L+ F +M+  G   +  L+T +I  + R G V
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL + DEM       D+V YN  ++   +A  +  +   F+EM   G+ PD  T+T++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I   CK   +++A+ LF+ + Q    P    YNT+I G+   G+ ++A  L     ++  
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I+Y  ++        V EA R++ EM    + P + + N +I   CR G  + A E
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALE 425

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M   G+ P+ ++ N +I+   + + +++A ++   M+++   P+ +T++ ++ G  
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + GR+ D+  +  +M++ G  P    YT+LI         ++  + + EM+  G  PD
Sbjct: 486 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 60/155 (38%)

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           R+  EM   G  P+      ++    +S    +A + +  M      P   +Y  LI   
Sbjct: 146 RILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGAL 205

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
                 D    L  +M+  G   +V  +  ++  F R+GR+  +  +L  M    L+ D 
Sbjct: 206 SEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADI 265

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             Y   I+       +  +++F  EM   G +PDD
Sbjct: 266 VLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDD 300


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 247/458 (53%), Gaps = 14/458 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--------VYPDTVTYNTLINAYCREGFLEEAFQL 52
           ++N LC++ +++ A   L  +E++         V  + V Y+ +I+  CR GF++E F+ 
Sbjct: 148 LINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEF 207

Query: 53  MNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCR 112
            N M G G+ P  FTY SLI GLC  G+      ++DEM++ GL      +  L+   C+
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267

Query: 113 KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
              + EA E+F EM  RG  P+IV+ + L+G +   G +D A   F  +   G   D   
Sbjct: 268 NGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWT 327

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           Y + I+GYC+ G V +A+++ DEM  +G V ++VTYN++++ LC+A  ++ A ++   M 
Sbjct: 328 YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
             G+ PD  T   L+ G CK   +++A+ LF+ + +  + PD+ +Y  LI G C    M 
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMG 447

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           +A  L  DM  + + P+ ++Y  LI+G C  G ++ A+RL  EM  KG  P  ++ + ++
Sbjct: 448 EAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILL 507

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
               +     +A    ++M+  G++PD + Y  +I+G+ + E +D+A  L  +M  + LV
Sbjct: 508 DALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLV 567

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIE--KGLNP 448
           PD++TY ++     + G    S    W+ +   + +NP
Sbjct: 568 PDIVTYTILFNAVFKSG----SNSYEWKFVNVIRDINP 601



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 234/449 (52%), Gaps = 8/449 (1%)

Query: 44  GFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY 103
           G +  +F +   +  +G        N+++ GLC  G   +A E  DE++  G S +  +Y
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRG--------VAPDIVSFSTLIGIFSRNGQLDRAL 155
             L+   C    ++EA  +   + +          V  ++V +S +I    RNG +D   
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            ++ EM   G+ P+   Y  +I G C  G  LE   + DEM+ +G  + V  +  +++GL
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
           C+  ML EA ++F+EM+ RG  P+  T T L+ G+C  GN++ A  LFD + +   K D+
Sbjct: 266 CKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDV 325

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
            TYN  I G+CKVG +  A +++ +M    + PN ++Y  LI+  C  G V+ A+ +   
Sbjct: 326 WTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKT 385

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M   G+ P +V+C  ++ G C+S    +A    +++V  G+ PD  SY  LI+G      
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 445

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           M +A  L+  M  + LVP ++TY+ ++ G CR GR+ ++  +L  M  KG  PD  TY+ 
Sbjct: 446 MGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSI 505

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L++    + +L EA    ++M++RG  PD
Sbjct: 506 LLDALWKKQHLDEAVFLFNQMIKRGLEPD 534



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 151/467 (32%), Positives = 245/467 (52%), Gaps = 8/467 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS--- 57
           ++  LC +  +  A  F  E+   G   + V+Y  LIN  C  G + EA  L+  +    
Sbjct: 113 VLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEK 172

Query: 58  -----GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCR 112
                G  +K  V  Y+ +I+ LC+ G  D   E  +EM+  G+ P+  TY +L+   C 
Sbjct: 173 EKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCG 232

Query: 113 KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
                E   +  EM RRG+   +  F+ LI    +NG L  A   F EM + G  P+ V 
Sbjct: 233 VGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVT 292

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
            T ++ GYC  G V  A ++ D + E G   DV TYN  ++G C+   + +A  +F+EM 
Sbjct: 293 CTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMC 352

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
             GV P+  T+ +LI   CK G ++ A  +   M +  + PDIVT   L+DG CK   ++
Sbjct: 353 REGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLD 412

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           +A  L+  ++   ++P+  SY ILI+G C+   + EA  L  +M  K + P +V+ + +I
Sbjct: 413 QAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLI 472

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G CRSG  S A   L++M  +G  PD+I+Y+ L++   +++++D+A  L ++M  +GL 
Sbjct: 473 DGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLE 532

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           PDV+ Y +++ G+C+  R+ ++  +   M  K L PD  TYT L N 
Sbjct: 533 PDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNA 579



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 227/428 (53%), Gaps = 3/428 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC++  +D    F  EM   GV P+  TY +LI   C  G   E F L++ M  +G
Sbjct: 191 VIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRG 250

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   V+ +  LI+GLCK G    A+E+ DEM+  G  P+  T   L+   C K N+  A 
Sbjct: 251 LDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAR 310

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  +   G   D+ +++  I  + + G++  A+  F EM   G+VP+ V Y  +I+  
Sbjct: 311 ELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCL 370

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  A ++   M   G   D+VT   +L+GLC++K L +A  LFN+++E G+ PD 
Sbjct: 371 CKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDV 430

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++T LIHG C    M +A+NL   M  K++ P IVTY+ LIDG C+ G +  A +L  +
Sbjct: 431 WSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNE 490

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +   P+ I+Y IL++      H+ EA  L+ +M+ +G++P ++    +I GYC+S  
Sbjct: 491 MHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSER 550

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A     +M  + + PD ++Y  L N   +  +    +  V+ + +    P V+ Y  
Sbjct: 551 IDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY-- 608

Query: 421 ILTGFCRQ 428
            L   C+ 
Sbjct: 609 -LAALCKS 615



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 244/470 (51%), Gaps = 8/470 (1%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           ++G   DTV  NT++   C  G + +A +  + +   G      +Y  LINGLC+ GR +
Sbjct: 100 KRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVN 159

Query: 83  RAKEVLDEMLQMG--------LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPD 134
            A  +L  + +          +  +   Y+ ++   CR   + E  E + EM   GV P+
Sbjct: 160 EAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPN 219

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
             ++ +LI      G+         EM   GL     ++T++I+G C+NG ++EA +M D
Sbjct: 220 EFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFD 279

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM+ +G   ++VT   ++ G C    +  A +LF+ + E G   D +T+   IHG+CK G
Sbjct: 280 EMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVG 339

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            +  A+ +FD M ++ + P+IVTYN+LID  CK GE+  A ++   M    ++P+ ++  
Sbjct: 340 RVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCC 399

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
           IL++G C    + +A  L+ ++V  G+ P + S   +I G C S    +A   L  M  +
Sbjct: 400 ILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLK 459

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
            + P  ++Y+ LI+G  R   +  A+ L+++M  +G +PD ITY+++L    ++  + ++
Sbjct: 460 NLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEA 519

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +  +MI++GL PD   YT +I+G+     + EA     EM  +  VPD
Sbjct: 520 VFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPD 569



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 10/136 (7%)

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G  S +     K++  G   D+++ NT++ G      + KA     ++ N G   + ++Y
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKG---------LNPDRSTYTTLINGHVSQNNLKEA 469
            +++ G C  GR++++  +L RMIEK          +  +   Y+ +I+       + E 
Sbjct: 146 GILINGLCENGRVNEAVNLL-RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEG 204

Query: 470 FRFHDEMLQRGFVPDD 485
           F F++EM+  G  P++
Sbjct: 205 FEFYNEMMGNGVCPNE 220


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 143/431 (33%), Positives = 236/431 (54%), Gaps = 4/431 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL---MNSMS 57
           ++ AL K+ ++  A   +    + G++P+ VT+N +I+   + G ++ A +L   M  MS
Sbjct: 169 IIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMS 228

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G  +KP   TYNS +NG CK G    A+E   EML   + P+  TY TL+    R  ++ 
Sbjct: 229 GCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLE 288

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A  +  E+  +G+ P+ V ++++I   S  G ++ A +   +M    + PD   Y+I+I
Sbjct: 289 NAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVI 348

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G CRNG++ EA K    +LE   V D  ++N ++N LCR+  L  A  L   M  RG+ 
Sbjct: 349 EGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLV 408

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  TF TLI  HCKDG +  A+ +++ M +   KP+++ YN++I+GF K G  + A  L
Sbjct: 409 PDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPA-IL 467

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             D + R    + ++Y  LI+GYC+ G + +AF L+ EM   GI  + V+ NT+I   C+
Sbjct: 468 LIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCK 527

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +G   +A E +  MV  G+ PD ++Y  LI  F ++ + ++   L   M  +G+VPD  T
Sbjct: 528 AGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQT 587

Query: 418 YNVILTGFCRQ 428
           Y  ++    ++
Sbjct: 588 YQTMVIPLLQE 598



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 256/476 (53%), Gaps = 4/476 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           + A   + +++  G +     +N  ++   +   +   +++   M   G    V T+N +
Sbjct: 110 EGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLI 169

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM---SR 128
           I  L K+GR   A  V+   L+ G+ P+  T+N ++  + +   M  A ++  +M   S 
Sbjct: 170 IYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSG 229

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
             V PD V++++ +  F + G L  A  + +EM    + P+   Y  +++GY R G +  
Sbjct: 230 CSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLEN 289

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A ++ DE++EKG + + V YN+I++ L     +  A  L ++M+++ ++PD +T++ +I 
Sbjct: 290 AFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIE 349

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G C++G +N+A     ++ + S+  D  ++N +I+  C+   +  A +L A+M  R + P
Sbjct: 350 GLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVP 409

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + +++G LI+ +C  G V  A +++ +M+  G KP L+  N++I G+ + G    A   +
Sbjct: 410 DVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLI 469

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             +   G+  D ++YNTLI+G+     +D+AFAL S+M N G++   +TYN ++   C+ 
Sbjct: 470 DTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKA 528

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G +  ++ ++  M+ +GL PD  TYT LI     + + +E    HD M+ +G VPD
Sbjct: 529 GHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPD 584



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 234/441 (53%), Gaps = 4/441 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM   G   +  T+N +I A  +EG L EA  ++      G+ P V T+N +I+G  K G
Sbjct: 153 EMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMG 212

Query: 80  RCDRAKEVLDEMLQMG---LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
             D A +++ +M  M    + PD+ TYN+ +   C+  N++ AEE   EM  + + P++ 
Sbjct: 213 AMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVR 272

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++TL+  ++R G L+ A     E+   GL+P++V+Y  II+     G +  A  +  +M
Sbjct: 273 TYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDM 332

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           ++K    D  TY+ ++ GLCR   L EA      +LE  +  D ++   +I+  C+  N+
Sbjct: 333 IDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNL 392

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
             A  L   M  + + PD+VT+ TLID  CK G++E A +++  MI     PN + Y  +
Sbjct: 393 AGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSV 452

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ING+   G    A  L   +   G+   +V+ NT+I GYC  G   +A    S+M + G+
Sbjct: 453 INGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGI 511

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
               ++YNTLIN   +  ++ +A  L+  M  +GL+PD +TY +++T F ++    +   
Sbjct: 512 LASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIE 571

Query: 437 ILWRMIEKGLNPDRSTYTTLI 457
           +   M+ KG+ PDR TY T++
Sbjct: 572 LHDYMVLKGVVPDRQTYQTMV 592



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   KID A     EM   G+    VTYNTLIN+ C+ G + +A +LM  M  +G
Sbjct: 486 LIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRG 545

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
           L P   TY  LI    KK   +   E+ D M+  G+ PD  TY T+++   ++E++
Sbjct: 546 LIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESV 601


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 142/429 (33%), Positives = 237/429 (55%), Gaps = 10/429 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   ++  A   L +M + G  PD VT  +L+N +CR   + +A  L++ M   G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP +  YN++I+ LCK  R + A +   E+ + G+ P+  TY  L+   C     S+A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M ++ + P+++++S L+  F +NG++  A   F EM    + PD V Y+ +ING 
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA +M D M+ KGC+ DVV+YNT++NG C+AK + +   LF EM +RG+  + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G  + G+++KA   F  M    I PDI TYN L+ G C  GE+EKA  ++ D
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R++  + ++Y  +I G C  G V EA+ L+  +  KG+KP +V+  T++ G C  G 
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             + +   +KM  EG+  +     TL +G     ++  +  L+ KM + G  P ++    
Sbjct: 486 LHEVEALYTKMKQEGLMKNDC---TLSDG-----DITLSAELIKKMLSCGYAPSLL--KD 535

Query: 421 ILTGFCRQG 429
           I +G C++ 
Sbjct: 536 IKSGVCKKA 544



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 257/477 (53%), Gaps = 8/477 (1%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +D K++ A     +M +   +P  V +N L++A  +    +    L   M   G++  ++
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T+N +IN  C   +   A  +L +ML++G  PD  T  +L+   CR+  +S+A  +  +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G  PDIV+++ +I    +  +++ A  +F+E++  G+ P+ V YT ++NG C +   
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A ++  +M++K    +V+TY+ +L+   +   + EA +LF EM+   + PD  T+++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I+G C    +++A  +FD+M  K    D+V+YNTLI+GFCK   +E   KL+ +M  R +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
             N ++Y  LI G+   G V +A   + +M   GI P + + N ++ G C +G+  KA  
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M    +D D ++Y T+I G  +   +++A++L   +  +GL PD++TY  +++G C
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +G +H+ E +  +M ++GL  +  T        +S  ++  +     +ML  G+ P
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCT--------LSDGDITLSAELIKKMLSCGYAP 530



 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 241/444 (54%)

Query: 42  REGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTA 101
           R+  L +A  L + M      P +  +N L++ + K  + D    +  +M  +G+  D  
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           T+N ++   C    +S A  I  +M + G  PD V+  +L+  F R  ++  A+    +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
              G  PD V Y  II+  C+   V +A     E+  KG   +VVTY  ++NGLC +   
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
           ++A  L ++M+++ + P+  T++ L+    K+G + +A  LF+ M + SI PDIVTY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           I+G C    +++AN+++  M+S+    + +SY  LING+C    V +  +L+ EM  +G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
               V+ NT+I+G+ ++GD  KA EF S+M   G+ PD  +YN L+ G      ++KA  
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +   M+ + +  D++TY  ++ G C+ G++ ++  +   +  KGL PD  TYTT+++G  
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDD 485
           ++  L E    + +M Q G + +D
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKND 505



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 235/414 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D       +ME  G+  D  T+N +IN +C    +  A  ++  M   G
Sbjct: 91  LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T  SL+NG C++ R   A  ++D+M+++G  PD   YN ++   C+ + +++A 
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F E+ R+G+ P++V+++ L+     + +   A     +M    + P+ + Y+ +++ +
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG VLEA ++ +EM+      D+VTY++++NGLC    + EA+ +F+ M+ +G   D 
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI+G CK   +   + LF  M+Q+ +  + VTYNTLI GF + G+++KA + ++ 
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    ISP+  +Y IL+ G C  G + +A  ++ +M  + +   +V+  T+I+G C++G 
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             +A      +  +G+ PD ++Y T+++G   +  + +  AL +KM+ +GL+ +
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/426 (34%), Positives = 225/426 (52%), Gaps = 12/426 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ VT+ T I ++C+ G L+ A QL++ M   G  P V  Y++LING  ++G  D+A ++
Sbjct: 223 PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 282

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ ML     P+T  YN  L   C  E   +  E+  EM R+G +P+  +FS LI    +
Sbjct: 283 LNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQ 339

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           N  +D A+    +M+  G  PD V Y IIIN     G V +AL++ + M+   C  D + 
Sbjct: 340 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALG 396

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N +L G CRA+   +A +L  +M          TF  LI   C++G +N A  +F+ M 
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMP 456

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +    PDIVTY++L++GF + G +E A +L+  M  +   P+  SY  ++ G C      
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWE 513

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  EMVGK   P  V+ N +I   C+ G   +A E L +M + G  PD  +YN LI
Sbjct: 514 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           NGF  +  +D A  L+S M  +   PD I+YN  L G CR  R  D+E ++  M+     
Sbjct: 574 NGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCT 630

Query: 448 PDRSTY 453
           P+  T+
Sbjct: 631 PNEVTF 636



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 254/517 (49%), Gaps = 45/517 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+D ++  A+  L      G   + VTY  LI+ YCR G L++A +L+ SM    
Sbjct: 130 LVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASMP--- 185

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TYN+++ GLC   + + A+E++ EM++    P+  T+ T +   C+   +  A 
Sbjct: 186 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 245

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR--------------------- 159
           ++  +M R G  PD+V +STLI  FS  G +D+AL                         
Sbjct: 246 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIA 305

Query: 160 -----------EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
                      EM   G  P+   ++++I+  C+N  V  A+++ ++M + GC  D V Y
Sbjct: 306 ERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNY 365

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N I+N L     + +A  L N M+ +   PD   F  ++ G C+    + A  L   M +
Sbjct: 366 NIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFR 422

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                  +T+N LID  C+ G +  A +++  M   + +P+ ++Y  L+NG+   G V  
Sbjct: 423 DDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEV 482

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A +L+  M     KP + S N ++KG CR+     A E +++MV +   P+ +++N LIN
Sbjct: 483 AIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILIN 539

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              ++  +D+A  ++ +M N G  PD+ TYN ++ GF  QGR+ D+  +L  M  K   P
Sbjct: 540 SLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---P 596

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           D  +Y + + G       ++A     EML+    P++
Sbjct: 597 DAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNE 633



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 236/454 (51%), Gaps = 13/454 (2%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           V++NTL+  YCR+G L +A +++ +    G    V TY +LI+G C+ GR D A   L  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDA---LRL 180

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           +  M ++PDT TYNT+L   C  +   EAEE+  EM R    P+ V+F+T I  F +NG 
Sbjct: 181 IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           LDRA+    +M   G  PD V+Y+ +ING+   G V +AL + + ML   C  + V YN 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 297

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
            L GLC A+   +  +L  EM+ +G  P+  TF+ LI   C++  ++ A+ + + M +  
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
            +PD V YN +I+   + G ++ A +L   M+ +   P+ + +  ++ G+C      +A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDAS 414

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L  +M         ++ N +I   C++G  + A +   +M      PD ++Y++L+NGF
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
             +  ++ A  L   M  +   PD+ +YN +L G CR  R  D+  ++  M+ K   P+ 
Sbjct: 475 SEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            T+  LIN    +  +  A    ++M   G  PD
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 218/417 (52%), Gaps = 12/417 (2%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + + C++  +D A   L +M + G  PD V Y+TLIN +  +G +++A  L+N+M     
Sbjct: 232 IRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---C 288

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP    YN+ + GLC   R +   E++ EM++ G SP+ AT++ L+   C+   +  A E
Sbjct: 289 KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVE 348

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  +M + G  PD V+++ +I   S  G++D AL   R + S    PD + +  ++ G+C
Sbjct: 349 VLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL---RLLNSMVCKPDALGFNAVLKGFC 405

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R     +A ++  +M    C +  +T+N +++ LC+  ++  A  +F +M      PD  
Sbjct: 406 RAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIV 465

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+++L++G  + G +  A+ LF  M     KPDI +YN ++ G C+    E A +L A+M
Sbjct: 466 TYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEM 522

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           + +   PN +++ ILIN  C  G V  A  +  +M   G  P + + N +I G+   G  
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
             A + LS M      PD+ISYN+ + G  R E    A  LV++M      P+ +T+
Sbjct: 583 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 175/313 (55%), Gaps = 9/313 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC+++ +DSA   L +ME+ G  PDTV YN +IN+    G +++A +L+NSM    
Sbjct: 333 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV--- 389

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP    +N+++ G C+  R   A E++ +M +        T+N L+   C+   ++ A 
Sbjct: 390 CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYAT 449

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M R    PDIV++S+L+  FS  G ++ A+  FR M      PD   Y  ++ G 
Sbjct: 450 QVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGL 506

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR     +A ++  EM+ K C  + VT+N ++N LC+  ++  A ++  +M   G  PD 
Sbjct: 507 CRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDI 566

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  LI+G  + G ++ AL L   M   S KPD ++YN+ + G C+    + A +L A+
Sbjct: 567 FTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAE 623

Query: 301 MISRKISPNYISY 313
           M+  K +PN +++
Sbjct: 624 MLRNKCTPNEVTF 636



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 201/408 (49%), Gaps = 11/408 (2%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N LI  LC  GR   A+ VLD +     + D  ++NTL+   CR   +++AE +      
Sbjct: 94  NILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGAARA 152

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G A ++V+++ LI  + R+G+LD AL   R + S  + PD   Y  ++ G C      E
Sbjct: 153 TGAA-NVVTYTALIDGYCRSGRLDDAL---RLIASMPVAPDTYTYNTVLKGLCIAKKWEE 208

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A ++  EM+   C  + VT+ T +   C+  +L  A  L ++M   G  PD   ++TLI+
Sbjct: 209 AEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLIN 268

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G  + G++++AL+L + M     KP+ V YN  + G C     E   +L A+M+ +  SP
Sbjct: 269 GFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSP 325

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N  ++ +LI+  C    V  A  +  +M   G +P  V+ N II      G    A   L
Sbjct: 326 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
           + MV +   PD++ +N ++ GF R E    A  L+++M         +T+N+++   C+ 
Sbjct: 386 NSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQN 442

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           G ++ +  +  +M      PD  TY++L+NG   Q  ++ A +    M
Sbjct: 443 GLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM 490



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 6/248 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  +   A   + +M +       +T+N LI+  C+ G +  A Q+   M    
Sbjct: 400 VLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYR 459

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY+SL+NG  ++G  + A ++   M      PD  +YN +L   CR     +A 
Sbjct: 460 CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAG 516

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +   P+ V+F+ LI    + G +DRA+    +M + G  PD   Y  +ING+
Sbjct: 517 ELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF 576

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + +ALK+   M    C  D ++YN+ L GLCRA+   +A++L  EML     P+ 
Sbjct: 577 SEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNE 633

Query: 241 YTFTTLIH 248
            TF    H
Sbjct: 634 VTFKYANH 641



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 38/173 (21%)

Query: 346 VSCNTIIK----------------------------------GYCRSGDASKADEFLSKM 371
           +SCN +IK                                  GYCR G  + A+  L   
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGAA 150

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            + G   + ++Y  LI+G+ R   +D A  L++ M    + PD  TYN +L G C   + 
Sbjct: 151 RATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKW 206

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++E ++  MI     P+  T+ T I        L  A +  D+M + G  PD
Sbjct: 207 EEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPD 259


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 249/469 (53%), Gaps = 4/469 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C++  ++ A    C M ++    + V+Y  LI+  C  G L EA +    M   G
Sbjct: 230 LVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDG 285

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  L+  LC+ GR   A  +  EM + G  P+  TY  L+   C++  M EA 
Sbjct: 286 CFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEAL 345

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM  +GVAP +V F+ LIG + + G ++ A+     M+S  + P+   Y  +I G+
Sbjct: 346 KMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGF 405

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   +  A+ + ++M+E     DVVTYNT+++GLC   ++  A  LF  M+  G  PD 
Sbjct: 406 CRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQ 465

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF   +   C+ G + +A  + + + +K +K +   Y  LIDG+CK G++E A  L+  
Sbjct: 466 WTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKR 525

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++ +  PN I++ ++I+G    G V +A  L  +M    +KPTL + N +++   +  D
Sbjct: 526 MLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYD 585

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A+E L++++S G  P+ ++Y   I  +  +  +++A  +V K++N+G++ D   YN+
Sbjct: 586 FDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNL 645

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++  +   G +  +  +L RM   G  P   TY+ L+   V + + KE 
Sbjct: 646 LINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEG 694



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 238/456 (52%), Gaps = 7/456 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSM---SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           +YN L+    R   ++E   L   M   +G  + P + T N+++N  CK G    A+   
Sbjct: 153 SYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFF 212

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
             +L+    PD  TY +L++  CR +++  A  +FC M RR    + VS++ LI      
Sbjct: 213 VRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEA 268

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+L  AL ++  M+  G  P    YT+++   C +G  LEAL +  EM E+GC  +V TY
Sbjct: 269 GKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTY 328

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
             +++ LC+   + EA  + NEM+E+GV P    F  LI  +CK G M  A+ +  +M  
Sbjct: 329 TVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMES 388

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K + P++ TYN LI GFC+   M++A  L   M+  K+SP+ ++Y  LI+G C +G V  
Sbjct: 389 KKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDS 448

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A RL+  M+  G  P   + N  +   CR G   +A + L  +  + V  +  +Y  LI+
Sbjct: 449 ASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALID 508

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G+ +   ++ A +L  +M  +  +P+ IT+NV++ G  ++G++ D+ L++  M +  + P
Sbjct: 509 GYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKP 568

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              TY  L+   + + +   A    + ++  G+ P+
Sbjct: 569 TLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPN 604



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 239/484 (49%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+N+ CK   +  A++F   + +    PD  TY +L+  YCR   +E A  +   M  + 
Sbjct: 195 MLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRN 254

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +Y +LI+GLC+ G+   A E    M + G  P   TY  L+   C      EA 
Sbjct: 255 ----AVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEAL 310

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  RG  P++ +++ LI    + G++D AL    EM   G+ P  V +  +I  Y
Sbjct: 311 SLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSY 370

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A+ +   M  K    +V TYN ++ G CR K +  A  L N+M+E  + PD 
Sbjct: 371 CKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDV 430

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLIHG C+ G ++ A  LF +M +    PD  T+N  +   C++G + +A+++   
Sbjct: 431 VTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILES 490

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + +  N  +Y  LI+GYC  G +  A  L+  M+ +   P  ++ N +I G  + G 
Sbjct: 491 LKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGK 550

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   +  M    V P   +YN L+   ++E + D+A  +++++ + G  P+V+TY  
Sbjct: 551 VQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTA 610

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  +C QGR+ ++E ++ ++  +G+  D   Y  LIN +     L  AF     M   G
Sbjct: 611 FIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTG 670

Query: 481 FVPD 484
             P 
Sbjct: 671 CEPS 674



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 232/445 (52%), Gaps = 4/445 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
            V+P+ +T NT++N+YC+ G +  A      +      P +FTY SL+ G C+    +RA
Sbjct: 184 SVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERA 243

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             V   M +     +  +Y  L+   C    + EA E +  M   G  P + +++ L+  
Sbjct: 244 CGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCA 299

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
              +G+   AL  F EM+  G  P+   YT++I+  C+ G + EALKM +EM+EKG    
Sbjct: 300 LCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPS 359

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VV +N ++   C+  M+ +A  +   M  + V P+  T+  LI G C+  +M++A+ L +
Sbjct: 360 VVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLN 419

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +  + PD+VTYNTLI G C+VG ++ A++L+  MI    SP+  ++   +   C MG
Sbjct: 420 KMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMG 479

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V EA ++   +  K +K    +   +I GYC++G    A     +M++E   P+SI++N
Sbjct: 480 RVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFN 539

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            +I+G  +E  +  A  LV  M    + P + TYN+++    ++     +  IL R+I  
Sbjct: 540 VMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISS 599

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEA 469
           G  P+  TYT  I  + SQ  L+EA
Sbjct: 600 GYQPNVVTYTAFIKAYCSQGRLEEA 624



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 251/515 (48%), Gaps = 29/515 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ ++D A   L EM +KGV P  V +N LI +YC+ G +E+A  ++  M  K 
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN LI G C+    DRA  +L++M++  LSPD  TYNTL+   C    +  A 
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSAS 450

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M R G +PD  +F+  +    R G++  A      +K   +  +   YT +I+GY
Sbjct: 451 RLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A  +   ML + C+ + +T+N +++GL +   + +A  L  +M +  V P  
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTL 570

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  L+    K+ + ++A  + + +     +P++VTY   I  +C  G +E+A ++   
Sbjct: 571 HTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIK 630

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT-----IIKGY 355
           + +  +  +   Y +LIN Y  MG +  AF +   M G G +P+ ++ +      +I+ +
Sbjct: 631 IKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKH 690

Query: 356 CRSGD-------------------ASKAD-----EFLSKMVSEGVDPDSISYNTLINGFV 391
            + G                     SK D         KM   G  P+  +Y+ LING  
Sbjct: 691 KKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLC 750

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   ++ AF+L   M   G+ P  I +N +L+  C+ G   ++  +L  M+E        
Sbjct: 751 KVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLE 810

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +Y  LI G   Q N ++A      +L+ G+  D+ 
Sbjct: 811 SYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 207/452 (45%), Gaps = 31/452 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+   +DSA      M + G  PD  T+N  +   CR G + EA Q++ S+  K 
Sbjct: 436 LIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKH 495

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K     Y +LI+G CK G+ + A  +   ML     P++ T+N ++++  RKE   +  
Sbjct: 496 VKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFN-VMIDGLRKEGKVQDA 554

Query: 121 EIFCE-MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  E M++  V P + +++ L+    +    DRA      + S+G  P+ V YT  I  
Sbjct: 555 MLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKA 614

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC  G + EA +M  ++  +G ++D   YN ++N      +L  A  +   M   G  P 
Sbjct: 615 YCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPS 674

Query: 240 FYTFTTL-----IHGHCKDGNMNKALN------------------------LFDIMTQKS 270
           + T++ L     I  H K+G+    L+                        LF+ M +  
Sbjct: 675 YLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECG 734

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
             P++ TY+ LI+G CKVG +  A  L+  M    ISP+ I +  L++  C +G   EA 
Sbjct: 735 CVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAV 794

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            L   M+       L S   +I G     +  KA+     ++  G + D +++  LI+G 
Sbjct: 795 TLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGL 854

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            +   +D+   L++ ME  G      TY++++
Sbjct: 855 AKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 153/317 (48%), Gaps = 34/317 (10%)

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLE---RGVFPDFYTFTTLIHGHCKDGNMNKA 259
           + + +YN +L  L R  M+ E   L+ EML      VFP+  T  T+++ +CK GNM  A
Sbjct: 149 LSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVA 208

Query: 260 LNLF----------DIMTQKSI---------------------KPDIVTYNTLIDGFCKV 288
              F          D+ T  S+                     + + V+Y  LI G C+ 
Sbjct: 209 RLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEA 268

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G++ +A + WA M      P   +Y +L+   C  G   EA  L+ EM  +G +P + + 
Sbjct: 269 GKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTY 328

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C+ G   +A + L++MV +GV P  + +N LI  + +   M+ A  ++  ME+
Sbjct: 329 TVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMES 388

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           + + P+V TYN ++ GFCR   M  +  +L +M+E  L+PD  TY TLI+G      +  
Sbjct: 389 KKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDS 448

Query: 469 AFRFHDEMLQRGFVPDD 485
           A R    M++ GF PD 
Sbjct: 449 ASRLFRLMIRDGFSPDQ 465



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 14/285 (4%)

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT-TLIHGHCKDGNMNKALNL 262
            + T++++L  L R + L  A+++ N M++    P   TF   L+        MN A   
Sbjct: 85  SLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLNLLR------RMNTAAAA 138

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS---RKISPNYISYGILING 319
            D   Q + K  + +YN L+    +   +++   L+ +M++     + PN I+   ++N 
Sbjct: 139 ADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNS 198

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           YC +G++  A   +  ++     P L +  +++ GYCR+ D  +A      M       +
Sbjct: 199 YCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----N 254

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           ++SY  LI+G      + +A    ++M   G  P V TY V++   C  GR  ++  +  
Sbjct: 255 AVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFG 314

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M E+G  P+  TYT LI+    +  + EA +  +EM+++G  P 
Sbjct: 315 EMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPS 359



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 2/168 (1%)

Query: 52  LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC 111
           L   M+  G  P + TY+ LINGLCK GR + A  +   M + G+SP    +N+LL   C
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDN 170
           +     EA  +   M        + S+  LI G+F +  + ++A   F  +   G   D 
Sbjct: 786 KLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNK-EKAEAVFCSLLRCGYNYDE 844

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
           V + ++I+G  + G+V +  ++ + M + GC +   TY+ ++  L RA
Sbjct: 845 VAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 246/466 (52%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K  +   A   L EME  G  P  VTYN+LI+AY R+G L+EA +L N M   G+   VF
Sbjct: 151 KSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVF 210

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TY +L++G  + G+ + A  V  EM   G  P+  T+N L+     +   +E  ++F E+
Sbjct: 211 TYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEI 270

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
                 PDIV+++TL+ +F +NG        F+EMK AG VP+   Y  +I+ Y R G  
Sbjct: 271 KNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSF 330

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A+ +   MLE G   D+ TYN +L  L R  +  +++ +F EM +    P+  T+ +L
Sbjct: 331 DQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSL 390

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           +H +     + + L L + +    I+P  V   TL+    K   + +A   + ++  +  
Sbjct: 391 LHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGF 450

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           SP+  +   +++ Y      T+   +   M   G  P+L + N+++  + RS +  +++E
Sbjct: 451 SPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEE 510

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            L +++++G+ PD+ISYNT+I  + R   M +A  + S+M   GLVPDVITYN  +  + 
Sbjct: 511 VLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYA 570

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
                 D+  ++  MI+ G  P+++TY ++++G+   N+  +A  F
Sbjct: 571 ADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMF 616



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 247/501 (49%), Gaps = 37/501 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFL-EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           M+  GV PD  TYNTLI   CR G L EEA  +   M   G  P   TYN+L++   K  
Sbjct: 95  MKNAGVLPDEYTYNTLITC-CRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSR 153

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A EVL EM   G SP   TYN+L+    R   + EA E+  +M   G+  D+ +++
Sbjct: 154 RTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYT 213

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  F R G+ + A+  F EM++AG  P+   +  +I  +   G   E +K+ +E+   
Sbjct: 214 TLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNS 273

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
            CV D+VT+NT+L    +  M +E   +F EM   G  P+  T+ TLI  + + G+ ++A
Sbjct: 274 CCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQA 333

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           ++++  M +  I PD+ TYN ++    + G  E++ K++A+M   +  PN ++Y  L++ 
Sbjct: 334 MDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHA 393

Query: 320 YCSMGHV-----------------------------------TEAFRLWYEMVGKGIKPT 344
           Y +   +                                    EA   + E+  KG  P 
Sbjct: 394 YANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPD 453

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           L + N ++  Y R    +K +E L+ M   G  P   +YN+L+    R EN +++  ++ 
Sbjct: 454 LSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLK 513

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++  +G+ PD I+YN ++  +CR GRM ++  I   M E GL PD  TY T +  + + +
Sbjct: 514 EILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADS 573

Query: 465 NLKEAFRFHDEMLQRGFVPDD 485
             ++A      M++ G  P+ 
Sbjct: 574 MFEDAIDVVRYMIKHGCKPNQ 594



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 246/521 (47%), Gaps = 38/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K+ K+  A   L ++ + G   D   Y +LI A    G   EA  +   M  +G
Sbjct: 4   IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63

Query: 61  LKPGVFTYNSLINGLCKKGR-CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-SE 118
            KP + TYN ++N   K G   ++ K + + M   G+ PD  TYNTL+   CR+ ++  E
Sbjct: 64  CKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLIT-CCRRGSLHEE 122

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F +M   G  PD V+++ L+ ++ ++ +   A+   REM+  G  P  V Y  +I+
Sbjct: 123 AAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLIS 182

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            Y R+G + EA++++++M+E G  +DV TY T+L+G  RA     A  +F EM   G  P
Sbjct: 183 AYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKP 242

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF  LI  H   G   + + +F+ +      PDIVT+NTL+  F + G   + + ++
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M      P   +Y  LI+ Y   G   +A  ++  M+  GI P L + N ++    R 
Sbjct: 303 KEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARG 362

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS-------------- 404
           G   ++++  ++M      P+ ++Y +L++ +   + + +  AL                
Sbjct: 363 GLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLL 422

Query: 405 ---------------------KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
                                +++ +G  PD+ T N +L+ + R+     +  IL  M E
Sbjct: 423 KTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNE 482

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G  P  +TY +L+  H    N + +     E+L +G  PD
Sbjct: 483 SGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPD 523



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 191/382 (50%), Gaps = 10/382 (2%)

Query: 3   NALCKDH----KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           NAL K H    K         E++     PD VT+NTL+  + + G   E   +   M  
Sbjct: 248 NALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G  P   TYN+LI+   + G  D+A ++   ML+ G++PD +TYN +L    R     +
Sbjct: 308 AGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQ 367

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT--II 176
           +E+IF EM      P+ +++ +L+  ++   ++ R L    E+ S  + P  VL    ++
Sbjct: 368 SEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVL 427

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           +N  C    ++EA     E+  KG   D+ T N +L+   R +M T+ +++ N M E G 
Sbjct: 428 VNSKC--DLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGF 485

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P   T+ +L++ H +  N  ++  +   +  K IKPD ++YNT+I  +C+ G M++A++
Sbjct: 486 TPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASR 545

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           ++++M    + P+ I+Y   +  Y +     +A  +   M+  G KP   + N+++ GYC
Sbjct: 546 IFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYC 605

Query: 357 RSGDASKADEFLSKMVSEGVDP 378
           +      A  F+S +    +DP
Sbjct: 606 KHNHRDDAIMFISSL--HELDP 625



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 188/407 (46%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   +  K +SA     EM   G  P+  T+N LI  +   G   E  ++   +    
Sbjct: 215 LLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSC 274

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + T+N+L+    + G       V  EM + G  P+  TYNTL+    R  +  +A 
Sbjct: 275 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAM 334

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+  M   G+ PD+ +++ ++   +R G  +++   F EMK     P+ + Y  +++ Y
Sbjct: 335 DIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAY 394

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                +   L + +E+         V   T++    +  +L EA+  F E+  +G  PD 
Sbjct: 395 ANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDL 454

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T   ++  + +     K   + + M +    P + TYN+L+    +    E++ ++  +
Sbjct: 455 STLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKE 514

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++++ I P+ ISY  +I  YC  G + EA R++ EM   G+ P +++ NT +  Y     
Sbjct: 515 ILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSM 574

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              A + +  M+  G  P+  +YN++++G+ +  + D A   +S + 
Sbjct: 575 FEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSLH 621



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 168/348 (48%), Gaps = 3/348 (0%)

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + +I +  + G++  A     ++   G   D   YT +I     NG   EA+ +  +M E
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 199 KGCVMDVVTYNTILNGLCRAKM-LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           +GC   ++TYN ILN   +  M   +   LF  M   GV PD YT+ TLI   C+ G+++
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITC-CRRGSLH 120

Query: 258 K-ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A  +F  M      PD VTYN L+D + K    ++A ++  +M     SP+ ++Y  L
Sbjct: 121 EEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSL 180

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+ Y   G + EA  L  +MV  GI   + +  T++ G+ R+G    A    ++M + G 
Sbjct: 181 ISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGC 240

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+  ++N LI          +   +  +++N   VPD++T+N +L  F + G   +   
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSG 300

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   M   G  P+R TY TLI+ +    +  +A   +  ML+ G  PD
Sbjct: 301 VFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPD 348


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 134/384 (34%), Positives = 218/384 (56%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++  C+  +   A   L +M + G  P  VT  +L+N +C+    +EA  L++SM+  G
Sbjct: 656  LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            L+P V  YN++INGLCK    + A E+   M + G+  D  TYNTL+   C     ++A 
Sbjct: 716  LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  +M +R + P+++ F+ LI  F + G L  A   ++EM    + P+ + Y  +ING+
Sbjct: 776  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C  G + +A  M D M+ KGC  DVVTYNT++ G C++K + +   LF EM  +G+  D 
Sbjct: 836  CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDA 895

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +T+ TLIHG+C+ G +N A  +F+ M    + PDIVTYN L+D  C  G++EKA  +  D
Sbjct: 896  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVED 955

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            +   ++  + I+Y I+I G C    V EA+ L+  +  KG+K   ++  T+I G CR+G 
Sbjct: 956  LQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGL 1015

Query: 361  ASKADEFLSKMVSEGVDPDSISYN 384
              +AD+  ++M  +G  P    Y+
Sbjct: 1016 RREADKLCTRMKEDGFMPSERIYD 1039



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 237/440 (53%)

Query: 46   LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
             ++AF L   M      P +  +  ++  + K  + D    +  +M  +G+S D  ++  
Sbjct: 596  FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655

Query: 106  LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
            L+   CR    S A  +  +M + G  P IV+  +L+  F +  +   A+     M   G
Sbjct: 656  LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 166  LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
            L P+ V+Y  +ING C+N  +  AL++   M +KG V D VTYNT+++GLC +   T+A 
Sbjct: 716  LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 226  DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
             L  +M++R + P+   FT LI    K+GN+ +A NL+  M ++S+ P+I+TYN+LI+GF
Sbjct: 776  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835

Query: 286  CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
            C  G +  A  ++  M+S+   P+ ++Y  LI G+C    V +  +L+ EM  +G+    
Sbjct: 836  CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDA 895

Query: 346  VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
             + NT+I GYC++G  + A +  ++MV  GV PD ++YN L++       ++KA  +V  
Sbjct: 896  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVED 955

Query: 406  MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
            ++   +  D+ITYN+I+ G CR  ++ ++  +   +  KG+  D   Y T+I+G      
Sbjct: 956  LQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGL 1015

Query: 466  LKEAFRFHDEMLQRGFVPDD 485
             +EA +    M + GF+P +
Sbjct: 1016 RREADKLCTRMKEDGFMPSE 1035



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 130/377 (34%), Positives = 212/377 (56%), Gaps = 1/377 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+  ++  A   L +M + G  P  VT+ +L++ +C    + +AF L+ SM   G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
            +P V  YN+LI+ LCK G  + A E+L+EM + G L+ D  TYNTLL   C      +A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             I  +M++R + PD+ +F+ LI  F + G LD A   +++M  + + P+ V Y  +ING
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C +G +  A K  D M  KGC  +VVTYNT++NG C+++ + +   LF  M   G+  D
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+ TLIHG+C+ G +  A ++F  M    + PDI+T+  L+ G C  GE+  A   + 
Sbjct: 346 TFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFN 405

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM S +     ++Y I+I+G C    V EA+ L+  +  +G+KP   +   +I G C++G
Sbjct: 406 DMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNG 465

Query: 360 DASKADEFLSKMVSEGV 376
              +ADE   +M  +G+
Sbjct: 466 PRREADELFRRMKEDGI 482



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 232/454 (51%)

Query: 10   KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
            K D A    CEM Q    P  V +  ++ A  +    +    L + M   G+   ++++ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 70   SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
             LI+  C+  R   A  +L +M+++G  P   T  +LL   C+     EA  +   M+  
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 130  GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
            G+ P++V ++T+I    +N  L+ AL  F  M+  G+V D V Y  +I+G C +G   +A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 190  LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             ++  +M+++    +V+ +  +++   +   L EA +L+ EM+ R V P+  T+ +LI+G
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 250  HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
             C  G +  A ++FD+M  K   PD+VTYNTLI GFCK   +E   KL+ +M  + +  +
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 310  YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
              +Y  LI+GYC  G +  A +++  MV  G+ P +V+ N ++   C +G   KA   + 
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 370  KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
             +    +D D I+YN +I G  R + + +A+ L   +  +G+  D I Y  +++G CR G
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014

Query: 430  RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
               +++ +  RM E G  P    Y   +  H + 
Sbjct: 1015 LRREADKLCTRMKEDGFMPSERIYDETLRDHYTS 1048



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 227/422 (53%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++ A+ K +K D       +ME  G+  D  ++  LI+ +CR      A  L+  M   G
Sbjct: 621  VLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLG 680

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             +P + T  SL+NG C+  R   A  ++D M ++GL P+   YNT++   C+  +++ A 
Sbjct: 681  FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNAL 740

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            EIF  M ++G+  D V+++TLI     +G+   A    R+M    + P+ + +T +I+ +
Sbjct: 741  EIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 800

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             + G +LEA  +  EM+ +    +++TYN+++NG C    L +A  +F+ M+ +G FPD 
Sbjct: 801  VKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDV 860

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T+ TLI G CK   +   + LF  MT + +  D  TYNTLI G+C+ G++  A K++  
Sbjct: 861  VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M+   + P+ ++Y IL++  C+ G + +A  +  ++    +   +++ N II+G CR+  
Sbjct: 921  MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDK 980

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              +A      +  +GV  D+I+Y T+I+G  R     +A  L ++M+  G +P    Y+ 
Sbjct: 981  VKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDE 1040

Query: 421  IL 422
             L
Sbjct: 1041 TL 1042



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/444 (31%), Positives = 225/444 (50%), Gaps = 10/444 (2%)

Query: 42  REGFL-----EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL 96
           R GFL     E+A  L   M      P V  +  L+  +    R +       +M   G+
Sbjct: 37  RTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGI 96

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           S D  ++  L+   CR   +S A  I  +M + G  P IV+F +L+  F    ++  A  
Sbjct: 97  SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGL 215
               M  +G  P+ V+Y  +I+  C+NG V  AL++ +EM +KG    D+VTYNT+L GL
Sbjct: 157 LVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGL 216

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
           C +    +A  +  +M +R + PD +TFT LI    K GN+++A  L+  M Q SI P+ 
Sbjct: 217 CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           VTYN+LI+G C  G +  A K +  M S+   PN ++Y  LING+C    V +  +L+  
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M  +G+     + NT+I GYC+ G    A +  S MVS GV PD I++  L++G      
Sbjct: 337 MYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGE 396

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +  A    + M +      ++ YN+++ G C+  ++ ++  +  R+  +G+ PD  TYT 
Sbjct: 397 IGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTI 456

Query: 456 LINGHVSQNNLKEAFRFHDEMLQR 479
           +I G       +EA    DE+ +R
Sbjct: 457 MILGLCKNGPRREA----DELFRR 476



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 224/436 (51%), Gaps = 2/436 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D+  +FL EM Q    P  V +  L+ A       E        M   G+   ++++  L
Sbjct: 48  DALDLFL-EMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I+  C+  R   A  +L +M+++G  P   T+ +LL   C +  + +A  +   M + G 
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIINGYCRNGFVLEAL 190
            P++V ++TLI    +NG ++ AL    EM+  G L  D V Y  ++ G C +G   +A 
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++  +M ++    DV T+  +++   +   L EA +L+ +ML+  + P+  T+ +LI+G 
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C  G +  A   FD+M  K   P++VTYNTLI+GFCK   +E   KL+  M    +  + 
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
            +Y  LI+GYC +G +  A  ++  MV  G+ P +++   ++ G C +G+   A    + 
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFND 406

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M S       ++YN +I+G  + + +++A+ L  ++  +G+ PD  TY +++ G C+ G 
Sbjct: 407 MRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 466

Query: 431 MHDSELILWRMIEKGL 446
             +++ +  RM E G+
Sbjct: 467 RREADELFRRMKEDGI 482



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 254/545 (46%), Gaps = 63/545 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC   ++  AK     M  KG +P+ VTYNTLIN +C+   +E+  +L   M  +G
Sbjct: 282 LINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREG 341

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L    FTYN+LI+G C+ G+   AK++   M+  G++PD  T+  LL   C    +  A 
Sbjct: 342 LVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAM 401

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M        IV+++ +I    +  +++ A   F  +   G+ PD   YTI+I G 
Sbjct: 402 VKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGL 461

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDV-------------VTYNTILNGLCRAKMLTEADDL 227
           C+NG   EA ++   M E G +                V+  TI+    R + + E+ DL
Sbjct: 462 CKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDL 521

Query: 228 FNE-------------------------------MLERGVFPDFYTFTTLIHG------- 249
           +                                 +LERG  P+  +F+   H        
Sbjct: 522 YYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHH 581

Query: 250 ----------HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
                     HC     + A  LF  M Q    P IV +  ++    K+ + +    L+ 
Sbjct: 582 HYRERLRSELHCI--KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFH 639

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M +  IS +  S+ ILI+ +C     + A  L  +M+  G +P++V+  +++ G+C+  
Sbjct: 640 KMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGN 699

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A   +  M   G++P+ + YNT+ING  +  +++ A  +   ME +G+V D +TYN
Sbjct: 700 RFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYN 759

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +++G C  GR  D+  +L  M+++ ++P+   +T LI+  V + NL EA   + EM++R
Sbjct: 760 TLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRR 819

Query: 480 GFVPD 484
              P+
Sbjct: 820 SVHPN 824



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 237/546 (43%), Gaps = 59/546 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K   +D A+    +M Q  + P+TVTYN+LIN  C  G L  A +  + M+ KG
Sbjct: 247 LIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKG 306

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+LING CK  R +   ++   M + GL  DT TYNTL+   C+   +  A+
Sbjct: 307 CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAK 366

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA---------------- 164
           +IF  M   GV PDI++   L+     NG++  A++ F +M+S                 
Sbjct: 367 DIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGL 426

Query: 165 -------------------GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                              G+ PD   YTI+I G C+NG   EA ++   M E G +   
Sbjct: 427 CKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQA 486

Query: 206 -------------VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
                        V+  TI+    R + + E+ DL+    +  ++        +      
Sbjct: 487 EDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSV 546

Query: 253 DGNMNKALNL-----------FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            G + + L L           F   +          Y   +       + + A  L+ +M
Sbjct: 547 KGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEM 606

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +  +  P+ + +  ++     M        L+++M   GI   L S   +I  +CR    
Sbjct: 607 LQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRF 666

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           S A   L KM+  G  P  ++  +L+NGF +     +A +LV  M   GL P+V+ YN +
Sbjct: 667 SLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTV 726

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + G C+   ++++  I + M +KG+  D  TY TLI+G  +     +A R   +M++R  
Sbjct: 727 INGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKI 786

Query: 482 VPDDAF 487
            P+  F
Sbjct: 787 DPNVIF 792



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 170/341 (49%), Gaps = 1/341 (0%)

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F  + + + AL  F EM  +  +P  V +T ++            +    +M   G   D
Sbjct: 40  FLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHD 99

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + ++  +++  CR   L+ A  +  +M++ G  P   TF +L+HG C    ++ A +L  
Sbjct: 100 LYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVA 159

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILINGYCSM 323
            M +   +P++V YNTLID  CK G++  A +L  +M  + +++ + ++Y  L+ G C  
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYS 219

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G   +A R+  +M  + I P + +   +I  + + G+  +A E   +M+   + P++++Y
Sbjct: 220 GEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTY 279

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N+LING      +  A      M ++G  P+V+TYN ++ GFC+  R+ D   +  RM  
Sbjct: 280 NSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR 339

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +GL  D  TY TLI+G+     L+ A      M+  G  PD
Sbjct: 340 EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPD 380



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 137/250 (54%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++   K+  +  AK    EM ++ V+P+ +TYN+LIN +C +G L +A  + + M  KG
Sbjct: 796  LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P V TYN+LI G CK  R +   ++  EM   GL  D  TYNTL+   C+   ++ A+
Sbjct: 856  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQ 915

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++F  M   GV PDIV+++ L+     NG++++AL+   +++   +  D + Y III G 
Sbjct: 916  KVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGM 975

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            CRN  V EA  +   +  KG  +D + Y T+++GLCR  +  EAD L   M E G  P  
Sbjct: 976  CRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSE 1035

Query: 241  YTFTTLIHGH 250
              +   +  H
Sbjct: 1036 RIYDETLRDH 1045



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 74/158 (46%)

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ EMV     P++V    ++              F  +M   G+  D  S+  LI
Sbjct: 48  DALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILI 107

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           + F R   +  A +++ KM   G  P ++T+  +L GFC + R+HD+  ++  M++ G  
Sbjct: 108 HCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYE 167

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           P+   Y TLI+      ++  A    +EM ++G +  D
Sbjct: 168 PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAAD 205


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 235/457 (51%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P T  +N ++++  +      A  L   +  KG+   + T N LIN  C  G+   +  V
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L  +L+ G  PD  T  TL+   C +  + +A +   ++       D +S+ TLI    +
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+   A+   R ++   + PD V+Y III+  C+N  V EA  +  EM  K    +VVT
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T++ G C    L EA  L NEM  + + PD YTF+ LI    K+G M  A  +  +M 
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +  +KPD+VTYN+L+DG+  V E++ A  ++  M    ++P   SY I+I+G C    V 
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+ EM  K + P  ++ N++I G C+SG  +   + + KM       D I+Y++LI
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +   +  ++D+A AL  KM  Q + PD+ TY +++ G C+ GR+  ++ +   ++ KG +
Sbjct: 427 DALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYH 486

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D  TYT +I+G        EA     +M   G +P+
Sbjct: 487 LDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPN 523



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 238/446 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I  +   L  + ++G +PD +T  TLI   C  G +++A +  + +    
Sbjct: 110 LINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALE 169

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y +LINGLCK G    A +++  + +  + PD   YN ++   C+ + + EA 
Sbjct: 170 FQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEAC 229

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM+ + + P++V+++TLI  F   G L  A+    EMK   + PD   ++I+I+  
Sbjct: 230 NLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDAL 289

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +  A  +   M++     DVVTYN++++G      +  A  +FN M + GV P  
Sbjct: 290 GKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGV 349

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++T +I G CK   +++A++LF+ M  K++ P+ +T+N+LIDG CK G +     L   
Sbjct: 350 QSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDK 409

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R    + I+Y  LI+  C   H+ +A  L+ +M+ + I+P + +   +I G C+ G 
Sbjct: 410 MRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGR 469

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E    ++ +G   D  +Y  +I+GF +    D+A AL+SKME+ G +P+ IT+++
Sbjct: 470 LKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDI 529

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           I+     +     +E +L  MI +GL
Sbjct: 530 IICALFEKDENDKAEKLLREMIARGL 555



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 216/412 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A  F  ++       D ++Y TLIN  C+ G  + A QLM ++  + 
Sbjct: 145 LIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERS 204

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V  YN +I+ LCK      A  +  EM    + P+  TY TL+   C    + EA 
Sbjct: 205 IKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAV 264

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  + + PD+ +FS LI    + G++  A +    M  A + PD V Y  +++GY
Sbjct: 265 ALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGY 324

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                V  A  + + M + G    V +Y  +++GLC+ KM+ EA  LF EM  + V P+ 
Sbjct: 325 FLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNT 384

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF +LI G CK G +    +L D M  +S   D++TY++LID  CK   +++A  L+  
Sbjct: 385 ITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKK 444

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI+++I P+  +Y ILI+G C  G +  A  ++  ++ KG    + +   +I G+C++G 
Sbjct: 445 MITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGL 504

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
             +A   LSKM   G  P++I+++ +I     ++  DKA  L+ +M  +GL+
Sbjct: 505 FDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 203/401 (50%)

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           A  + + ML M   P T  +N +L    + +    A  +   +  +G+  D+V+ + LI 
Sbjct: 53  AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILIN 112

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            F   GQ+  +      +   G  PD +  T +I G C  G V +ALK  D+++     +
Sbjct: 113 CFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL 172

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D ++Y T++NGLC+      A  L   + ER + PD   +  +I   CK+  + +A NL+
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLY 232

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M  K I P++VTY TLI GFC +G + +A  L  +M  + I+P+  ++ ILI+     
Sbjct: 233 SEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKE 292

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G +  A  +   M+   +KP +V+ N+++ GY    +   A    + M   GV P   SY
Sbjct: 293 GKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSY 352

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
             +I+G  + + +D+A +L  +M+++ ++P+ IT+N ++ G C+ GR+     ++ +M +
Sbjct: 353 TIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRD 412

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +    D  TY++LI+      +L +A     +M+ +   PD
Sbjct: 413 RSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPD 453


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 153/485 (31%), Positives = 258/485 (53%), Gaps = 21/485 (4%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           ME KGV P TVT+N LIN +C  G ++ AF +M  +   G +P V T+ +L+ G C   +
Sbjct: 80  MEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDK 139

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE--NMSEAEEIFCEMSRRG-VAPDIVS 137
              A  + DEM+   +  D   Y TL+   C+ +      A ++  +M  R  V P+++ 
Sbjct: 140 MLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIM 199

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR-----------NGFV 186
           ++T++    ++G ++ A +   +M   G+ PD   Y+ +I G CR           NGF 
Sbjct: 200 YNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFC 259

Query: 187 L-----EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           L     EA ++ + M+E+G   D++ YN ++NG C    + EA  LF+ M+ERG  PD  
Sbjct: 260 LNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTI 319

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+T L+HG+C    +++A NLF  M ++ + PD+ +YN LI G+CK   + +A  L  DM
Sbjct: 320 TYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDM 379

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM-VGKGIKPTLVSCNTIIKGYCRSGD 360
             + + PN I+Y  +++G C  G + +A++L  EM       P + + N +++  CR   
Sbjct: 380 FLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIEC 439

Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             KA  F   ++ E    P+  SYN LI+G  +   +D+A  L + M  + LVPD++TYN
Sbjct: 440 VEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYN 499

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++L       ++  +  +L +++++G++P+  TY  LING       K A +    +  R
Sbjct: 500 ILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIR 559

Query: 480 GFVPD 484
           G+ PD
Sbjct: 560 GYHPD 564



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 224/434 (51%), Gaps = 29/434 (6%)

Query: 76  CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           CK    D A  +   M+ M   P    +  +L    +    + A +++  M  +GV P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           V+F+ LI  F   GQ+D A     ++   G  P+ V +T ++ G+C N  +L+AL + DE
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKM--LTEADDLFNEMLERG-VFPDFYTFTTLIHGHCK 252
           M+ +    D V Y T++NGLC++K+     A  L  +M ER  V P+   + T++HG CK
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE----------------MEKANK 296
           DGN+N+A  L   M  + I PDI TY++LI G C+ G+                +++A +
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+  MI R    + I+Y IL+NGYC    V EA +L++ MV +G +P  ++   ++ GYC
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
                 +A      M+  G+ PD  SYN LI G+ + E + +A  L+  M  + LVP++I
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEK-----GLNPDRSTYTTLINGHVSQNNLKEAFR 471
           TYN ++ G C+ G + D+    W+++++        PD +TY  L+        +++A  
Sbjct: 390 TYNSVVDGLCKSGGILDA----WKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIA 445

Query: 472 FHDEML-QRGFVPD 484
           F   ++ +R F P+
Sbjct: 446 FFKHLIFERSFAPN 459



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 206/387 (53%), Gaps = 19/387 (4%)

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
            +C+ +++ +A  +F  M      P IV F+ ++G  ++      A+  +  M+  G+VP
Sbjct: 28  STCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVP 87

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
             V + I+IN +C  G +  A  +  ++L+ GC  +VVT+ T++ G C    + +A  ++
Sbjct: 88  FTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIY 147

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKD--GNMNKALNLFDIMTQKS-IKPDIVTYNTLIDGF 285
           +EM+ R +  D   + TLI+G CK   G    A+ L   M ++  +KP+++ YNT++ G 
Sbjct: 148 DEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGL 207

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILI----------------NGYCSMGHVTEA 329
           CK G + +A  L + MI + I P+  +Y  LI                NG+C    V EA
Sbjct: 208 CKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEA 267

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             L+  M+ +G +  +++ N ++ GYC +    +A +    MV  G  PD+I+Y  L++G
Sbjct: 268 RELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHG 327

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           +   + +D+A  L   M  +GLVPDV +YN+++ G+C+  R+ ++  +L  M  K L P+
Sbjct: 328 YCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPN 387

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEM 476
             TY ++++G      + +A++  DEM
Sbjct: 388 IITYNSVVDGLCKSGGILDAWKLVDEM 414



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 184/363 (50%), Gaps = 43/363 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C ++K+D A+     M ++G   D + YN L+N YC    + EA +L + M  +G
Sbjct: 254 LLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERG 313

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   TY  L++G C   + D A+ +   M++ GL PD  +YN L+   C+ E + EA 
Sbjct: 314 EQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAM 373

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  + + P+I+++++                                   +++G 
Sbjct: 374 NLLEDMFLKNLVPNIITYNS-----------------------------------VVDGL 398

Query: 181 CRNGFVLEALKMRDEMLEKGCVM---DVVTYNTILNGLCRAKMLTEADDLFNEML-ERGV 236
           C++G +L+A K+ DEM    C     DV TYN +L  LCR + + +A   F  ++ ER  
Sbjct: 399 CKSGGILDAWKLVDEM--HYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSF 456

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+ +++  LI G CK+  +++A+NLF+ M  K++ PDIVTYN L+D      +++KA  
Sbjct: 457 APNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIA 516

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L   ++ + ISPN  +Y ILING    G    A ++   +  +G  P + +   II   C
Sbjct: 517 LLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKT--YIINELC 574

Query: 357 RSG 359
           + G
Sbjct: 575 KGG 577



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 63/132 (47%)

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+      A     +MV     P  + +  ++    +      A  L + ME +G+VP  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           +T+N+++  FC  G+M  +  ++ ++++ G  P+  T+TTL+ G    + + +A   +DE
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 476 MLQRGFVPDDAF 487
           M+ R    DD  
Sbjct: 150 MVARRIRFDDVL 161


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 257/479 (53%), Gaps = 3/479 (0%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
            + D A   L  + ++G  P  V++N+++    ++  ++EA  L + M  K  KP + TY
Sbjct: 330 ERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTY 388

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N +I+ LC  GR + A ++ DEM   GL P+  + N ++   C+   + EA  IF   S 
Sbjct: 389 NIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASE 448

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           RG  P+ V++ +LI    + G++D A   F +M  AG   + ++YT +I  +  +G   +
Sbjct: 449 RGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKED 508

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
             K+  EM+ +G   D+   NT ++ + +A  + +   +F +M   G  PD  +++ LIH
Sbjct: 509 GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIH 568

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G  K G   +  N+F  M+Q+    D   YN ++DG CK G+++KA ++  +M  + + P
Sbjct: 569 GLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHP 628

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
              +YG +++G   +  + EA+ L+ E   KGI+  ++  +++I G+ + G   +A   L
Sbjct: 629 TVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLIL 688

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M+ +G+ P+  ++N+L++  V+ E +D+A      M+     P+  TY++++ G CR 
Sbjct: 689 EEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRV 748

Query: 429 GRMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            + ++   + W+ ++K GL P+  TYTT+I+G     N+ +A+   +     G +PD A
Sbjct: 749 QK-YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSA 806



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 252/540 (46%), Gaps = 71/540 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL +  + + A   L +M+  G       + TL+ A  REG +E A  L++ + G  
Sbjct: 182 LIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSC 241

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P +  YN  I+   K G  D A +   E+   GL PD  +Y +++   C+   + EAE
Sbjct: 242 LEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAE 301

Query: 121 EIFCEMS-----------------------------------RRGVAPDIVSFSTLIGIF 145
           E+F +M                                     RG  P +VSF++++   
Sbjct: 302 ELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCL 361

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  ++D AL  F  MK     P+   Y III+  C  G V EA K+RDEM   G   ++
Sbjct: 362 GKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNL 420

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           ++ N +++ LC+A  L EA  +F    ERG  P+  T+ +LI G  K G ++ A  LF+ 
Sbjct: 421 LSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEK 480

Query: 266 -----------------------------------MTQKSIKPDIVTYNTLIDGFCKVGE 290
                                              M ++  +PD+   NT +D   K GE
Sbjct: 481 MLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGE 540

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           +EK   ++ DM S    P+  SY ILI+G    G   E   ++  M  +G      + N 
Sbjct: 541 VEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNA 600

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++ G C+SG   KA E L +M  + V P   +Y ++++G  + + +D+A+ L  + +++G
Sbjct: 601 VVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKG 660

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           +  +VI Y+ ++ GF + GR+ ++ LIL  M++KGL P+  T+ +L++  V    + EA 
Sbjct: 661 IELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEAL 720



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 244/469 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   +++ A     EME  G++P+ ++ N +++  C+   LEEA ++  S S +G
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG 450

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY SLI+GL KKG+ D A  + ++ML  G   +   Y +L+          +  
Sbjct: 451 CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGH 510

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ EM RRG  PD+   +T +    + G++++    F +MKS G +PD   Y+I+I+G 
Sbjct: 511 KIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   E   +   M ++G  +D   YN +++GLC++  + +A ++  EM  + V P  
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++ G  K   +++A  LF+    K I+ +++ Y++LIDGF KVG +++A  +  +
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEE 690

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + ++PN  ++  L++       + EA   +  M      P   + + +I G CR   
Sbjct: 691 MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M  +G+ P+ ++Y T+I+G  +  N+  A++L  + +  G +PD  ++N 
Sbjct: 751 YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++ G     R  ++  +      +G   +  T  +L++       L++A
Sbjct: 811 LIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA 859



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 239/516 (46%), Gaps = 36/516 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  L +  +++ A   +  M      P    Y  LI A       E A +L+  M   G
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  V  + +L+  L ++G+ + A  ++DE+    L PD   YN  +    +  ++  A 
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F E+   G+ PD VS+++++ +  + G+L  A   F +M++   VP    Y  +I GY
Sbjct: 267 KFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                  +A K+ + + E+GC+  VV++N+IL  L + + + EA  LF+ M ++   P+ 
Sbjct: 327 GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNI 385

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I   C  G +N+A  + D M    + P++++ N ++D  CK  ++E+A++++  
Sbjct: 386 STYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFES 445

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRL---------------------------- 332
              R  +PN ++Y  LI+G    G + +A+RL                            
Sbjct: 446 ASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGR 505

Query: 333 -------WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
                  + EM+ +G +P L   NT +    ++G+  K       M S G  PD  SY+ 
Sbjct: 506 KEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSI 565

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  +     +   +   M  QG   D   YN ++ G C+ G++  +  +L  M  K 
Sbjct: 566 LIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH 625

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           ++P  +TY ++++G    + L EA+   +E   +G 
Sbjct: 626 VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGI 661



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 219/476 (46%), Gaps = 1/476 (0%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           H + + +  L EM   G          L+    R   LE+AF+++ +M     +P    Y
Sbjct: 120 HDLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAY 179

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
             LI  L +  + +RA E+L +M  +G       + TL+    R+  M  A  +  E+  
Sbjct: 180 TVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKG 239

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
             + PDIV ++  I  F + G +D A  +F E+K+ GL PD+V YT ++   C+ G + E
Sbjct: 240 SCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGE 299

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A ++  +M  +  V     YNT++ G   A+   +A  L   + ERG  P   +F +++ 
Sbjct: 300 AEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILT 359

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
              K   +++AL LFD+M +K  KP+I TYN +ID  C  G + +A K+  +M    + P
Sbjct: 360 CLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFP 418

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N +S  I+++  C    + EA R++     +G  P  V+  ++I G  + G    A    
Sbjct: 419 NLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLF 478

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            KM+  G D + I Y +LI  F      +    +  +M  +G  PD+   N  +    + 
Sbjct: 479 EKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKA 538

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G +     I   M   G  PD  +Y+ LI+G       +E       M Q+GF  D
Sbjct: 539 GEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALD 594



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 60/161 (37%), Gaps = 35/161 (21%)

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +AFR+   M     +P   +   +I     +    +A E L +M   G +     + 
Sbjct: 156 RLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFT 215

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TL+    RE  M+ A ALV +++   L PD++ YNV +  F + G               
Sbjct: 216 TLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAG--------------- 260

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                               ++  A++F  E+   G  PDD
Sbjct: 261 --------------------SVDMAWKFFHELKAHGLRPDD 281


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 253/517 (48%), Gaps = 49/517 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +  A   L E++ KGV P   TY  LIN +C+ G  E   QL+  M+ +G
Sbjct: 242 IIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 301

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   V  +N++I+   K G   +A E +  M +MG  PD  TYNT++  SC+   + EA+
Sbjct: 302 LNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEAD 361

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   +   RG+ P+  S++ L+  + + G   +A      +   G  PD V Y   I+G 
Sbjct: 362 EFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGV 421

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G +  AL +R++M+EKG   D   YN +++GLC+         L +EML+R V PD 
Sbjct: 422 VVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDV 481

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG----------- 289
           Y F TL+ G  ++G +++A+ +F ++ +K + P IV YN +I GFCK G           
Sbjct: 482 YVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNK 541

Query: 290 ------------------------EMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                                   +M  A K++  M+  K  PN I+Y  LING+C    
Sbjct: 542 MKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKAD 601

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A +++  M    + P +V+  T++ G+ ++G   KA      M+  G  P+  +++ 
Sbjct: 602 MIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHY 661

Query: 386 LINGFV----------REENMDKAFALV----SKMENQGLVPDVITYNVILTGFCRQGRM 431
           LING             +++M+   +L+    + M ++G    +  YN ++   C+ G +
Sbjct: 662 LINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMV 721

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
             ++L+L +M+ KG   D   +T +++G   +   KE
Sbjct: 722 DTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKE 758



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 252/547 (46%), Gaps = 75/547 (13%)

Query: 15  KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-KGLKPGVFTYNSLIN 73
           ++ L  M+ + + P    ++ LI AY   G L+ A QL +++       P V   NSL+N
Sbjct: 111 ELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLN 170

Query: 74  GLCKKGRCDRAKEVLDEMLQM--------------------------------------- 94
           GL K G+ D A ++ D+MLQ                                        
Sbjct: 171 GLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGK 230

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G  P    YN ++   C+K ++  A     E+  +GV P + ++  LI  F + G+ +  
Sbjct: 231 GCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAV 290

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
                EM + GL  +  ++  +I+   + G V +A +    M E GC  D+ TYNT++N 
Sbjct: 291 DQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINF 350

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN-LFDI-------- 265
            C+   + EAD+   +  ERG+ P+ +++T L+H +CK G+  KA   LF I        
Sbjct: 351 SCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPD 410

Query: 266 --------------------------MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
                                     M +K + PD   YN L+ G CK G       L +
Sbjct: 411 LVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLS 470

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+ R + P+   +  L++G+   G + EA +++  ++ KG+ P +V  N +IKG+C+ G
Sbjct: 471 EMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFG 530

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             + A   L+KM +    PD  +Y+T+I+G+V++ +M  A  +  +M      P+VITY 
Sbjct: 531 KMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYT 590

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ GFC++  M  +E +   M    L P+  TYTTL+ G       ++A    + ML  
Sbjct: 591 SLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMN 650

Query: 480 GFVPDDA 486
           G  P+DA
Sbjct: 651 GCPPNDA 657



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 242/498 (48%), Gaps = 39/498 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK----GVYPDTVTYNTLINAYCREGFLEEAFQLMNSM 56
           ++N L K  K+D A     +M Q     G   D  T + ++   C  G +EE  +L+   
Sbjct: 168 LLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDR 227

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            GKG  P V  YN +I+G CKKG    A   L E+   G+ P   TY  L+   C+    
Sbjct: 228 WGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEF 287

Query: 117 SEAEEIFCEMSRRGV-----------------------------------APDIVSFSTL 141
              +++  EM+ RG+                                    PDI +++T+
Sbjct: 288 EAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTM 347

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I    + G++  A  +  + K  GL+P+   YT +++ YC+ G  ++A  M   + E G 
Sbjct: 348 INFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGE 407

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             D+V+Y   ++G+     +  A  +  +M+E+GVFPD   +  L+ G CK+G       
Sbjct: 408 KPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKL 467

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L   M  ++++PD+  + TL+DGF + GE+++A K++  +I + + P  + Y  +I G+C
Sbjct: 468 LLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFC 527

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G +T+A     +M      P   + +T+I GY +  D S A +   +M+     P+ I
Sbjct: 528 KFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVI 587

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y +LINGF ++ +M +A  +   M++  LVP+V+TY  ++ GF + G+   +  I   M
Sbjct: 588 TYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELM 647

Query: 442 IEKGLNPDRSTYTTLING 459
           +  G  P+ +T+  LING
Sbjct: 648 LMNGCPPNDATFHYLING 665



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 197/429 (45%), Gaps = 44/429 (10%)

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
           S D   +++LL          E E +   M  + + P   +FS LI  +  +G LDRAL 
Sbjct: 88  SLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQ 147

Query: 157 YF---REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE----KGCVMDVVTYN 209
            F   REM +   +P  V    ++NG  ++G V  AL++ D+ML+     G V+D  T +
Sbjct: 148 LFHTVREMHNC--LPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTS 205

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            ++ GLC    + E   L  +   +G  P    +  +I G+CK G++  A      +  K
Sbjct: 206 IVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMK 265

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS---------------------- 307
            + P + TY  LI+GFCK GE E  ++L  +M +R ++                      
Sbjct: 266 GVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKA 325

Query: 308 -------------PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
                        P+  +Y  +IN  C  G + EA     +   +G+ P   S   ++  
Sbjct: 326 AETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHA 385

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           YC+ GD  KA   L ++   G  PD +SY   I+G V    +D A  +  KM  +G+ PD
Sbjct: 386 YCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPD 445

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
              YNV+++G C+ GR    +L+L  M+++ + PD   + TL++G +    L EA +   
Sbjct: 446 AQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFK 505

Query: 475 EMLQRGFVP 483
            ++++G  P
Sbjct: 506 VIIRKGVDP 514



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 165/351 (47%), Gaps = 49/351 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ +  + K+ L EM  + V PD   + TL++ + R G L+EA ++   +  KG
Sbjct: 452 LMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKG 511

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + PG+  YN++I G CK G+   A   L++M  +  +PD  TY+T++    ++ +MS A 
Sbjct: 512 VDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSAL 571

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M +    P+++++++LI  F +   + RA   FR MKS  LVP+ V YT ++ G+
Sbjct: 572 KMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGF 631

Query: 181 CRNGFVLEALKMRDEMLEKGC------------------------------------VMD 204
            + G   +A  + + ML  GC                                    ++D
Sbjct: 632 FKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILD 691

Query: 205 -------------VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
                        +  YN+++  LC+  M+  A  L  +ML +G   D   FT ++HG C
Sbjct: 692 FFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLC 751

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
             G   +  N+      K      V Y+  +D +   G + +A+ +   +I
Sbjct: 752 HKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLI 802


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 237/429 (55%), Gaps = 10/429 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   ++  A   L +M + G  PD VT  +L+N +CR   + +A  L++ M   G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP +  YN++I+ LCK  R + A +   E+ + G+ P+  TY  L+   C     S+A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M ++ + P+++++S L+  F +NG++  A   F EM    + PD V Y+ ++NG 
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +  + EA +M D M+ KGC+ DVV+YNT++NG C+AK + +   LF EM +RG+  + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G  + G+++KA   F  M    I PDI TYN L+ G C  GE+EKA  ++ D
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R++  + ++Y  +I G C  G V EA+ L+  +  KG+KP +V+  T++ G C  G 
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             + +   +KM  EG+  +     TL +G     ++  +  L+ KM + G  P ++    
Sbjct: 486 LHEVEALYTKMKQEGLMKNDC---TLSDG-----DITLSAELIKKMLSCGYAPSLL--KD 535

Query: 421 ILTGFCRQG 429
           I +G C++ 
Sbjct: 536 IKSGVCKKA 544



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 257/477 (53%), Gaps = 8/477 (1%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +D K++ A     +M +   +P  V +N L++A  +    +    L   M   G++  ++
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T+N +IN  C   +   A  +L +ML++G  PD  T  +L+   CR+  +S+A  +  +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G  PDIV+++ +I    +  +++ A  +F+E++  G+ P+ V YT ++NG C +   
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A ++  +M++K    +V+TY+ +L+   +   + EA +LF EM+   + PD  T+++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           ++G C    +++A  +FD+M  K    D+V+YNTLI+GFCK   +E   KL+ +M  R +
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
             N ++Y  LI G+   G V +A   + +M   GI P + + N ++ G C +G+  KA  
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M    +D D ++Y T+I G  +   +++A++L   +  +GL PD++TY  +++G C
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +G +H+ E +  +M ++GL  +  T        +S  ++  +     +ML  G+ P
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCT--------LSDGDITLSAELIKKMLSCGYAP 530



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 241/444 (54%)

Query: 42  REGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTA 101
           R+  L +A  L + M      P +  +N L++ + K  + D    +  +M  +G+  D  
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           T+N ++   C    +S A  I  +M + G  PD V+  +L+  F R  ++  A+    +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
              G  PD V Y  II+  C+   V +A     E+  KG   +VVTY  ++NGLC +   
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
           ++A  L ++M+++ + P+  T++ L+    K+G + +A  LF+ M + SI PDIVTY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           ++G C    +++AN+++  M+S+    + +SY  LING+C    V +  +L+ EM  +G+
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
               V+ NT+I+G+ ++GD  KA EF S+M   G+ PD  +YN L+ G      ++KA  
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +   M+ + +  D++TY  ++ G C+ G++ ++  +   +  KGL PD  TYTT+++G  
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDD 485
           ++  L E    + +M Q G + +D
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKND 505



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 235/414 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D       +ME  G+  D  T+N +IN +C    +  A  ++  M   G
Sbjct: 91  LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T  SL+NG C++ R   A  ++D+M+++G  PD   YN ++   C+ + +++A 
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F E+ R+G+ P++V+++ L+     + +   A     +M    + P+ + Y+ +++ +
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG VLEA ++ +EM+      D+VTY++++NGLC    + EA+ +F+ M+ +G   D 
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADV 330

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI+G CK   +   + LF  M+Q+ +  + VTYNTLI GF + G+++KA + ++ 
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    ISP+  +Y IL+ G C  G + +A  ++ +M  + +   +V+  T+I+G C++G 
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             +A      +  +G+ PD ++Y T+++G   +  + +  AL +KM+ +GL+ +
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 148/426 (34%), Positives = 225/426 (52%), Gaps = 12/426 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ VT+ T I ++C+ G L+ A QL++ M   G  P V  Y++LING  ++G  D+A ++
Sbjct: 40  PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 99

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ ML     P+T  YN  L   C  E   +  E+  EM R+G +P+  +FS LI    +
Sbjct: 100 LNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQ 156

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           N  +D A+    +M+  G  PD V Y IIIN     G V +AL++ + M+   C  D + 
Sbjct: 157 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALG 213

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N +L G CRA+   +A +L  +M          TF  LI   C++G +N A  +F+ M 
Sbjct: 214 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 273

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +    PDIVTY++L++GF + G +E A +L+  M  +   P+  SY  ++ G C      
Sbjct: 274 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWE 330

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  EMVGK   P  V+ N +I   C+ G   +A E L +M + G  PD  +YN LI
Sbjct: 331 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 390

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           NGF  +  +D A  L+S M  +   PD I+YN  L G CR  R  D+E ++  M+     
Sbjct: 391 NGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCT 447

Query: 448 PDRSTY 453
           P+  T+
Sbjct: 448 PNEVTF 453



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 223/457 (48%), Gaps = 41/457 (8%)

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  +TYN+++ GLC   + + A+E++ EM++    P+  T+ T +   C+   +  A 
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR--------------------- 159
           ++  +M R G  PD+V +STLI  FS  G +D+AL                         
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIA 122

Query: 160 -----------EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
                      EM   G  P+   ++++I+  C+N  V  A+++ ++M + GC  D V Y
Sbjct: 123 ERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNY 182

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N I+N L     + +A  L N M+ +   PD   F  ++ G C+    + A  L   M +
Sbjct: 183 NIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFR 239

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
                  +T+N LID  C+ G +  A +++  M   + +P+ ++Y  L+NG+   G V  
Sbjct: 240 DDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEV 299

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A +L+  M     KP + S N ++KG CR+     A E +++MV +   P+ +++N LIN
Sbjct: 300 AIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILIN 356

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              ++  +D+A  ++ +M N G  PD+ TYN ++ GF  QGR+ D+  +L  M  K   P
Sbjct: 357 SLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---P 413

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           D  +Y + + G       ++A     EML+    P++
Sbjct: 414 DAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNE 450



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 200/391 (51%), Gaps = 9/391 (2%)

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           M ++PDT TYNT+L   C  +   EAEE+  EM R    P+ V+F+T I  F +NG LDR
Sbjct: 1   MPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDR 60

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A+    +M   G  PD V+Y+ +ING+   G V +AL + + ML   C  + V YN  L 
Sbjct: 61  AVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALK 117

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLC A+   +  +L  EM+ +G  P+  TF+ LI   C++  ++ A+ + + M +   +P
Sbjct: 118 GLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEP 177

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D V YN +I+   + G ++ A +L   M+ +   P+ + +  ++ G+C      +A  L 
Sbjct: 178 DTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELI 234

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            +M         ++ N +I   C++G  + A +   +M      PD ++Y++L+NGF  +
Sbjct: 235 AQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQ 294

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
             ++ A  L   M  +   PD+ +YN +L G CR  R  D+  ++  M+ K   P+  T+
Sbjct: 295 GLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTF 351

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             LIN    +  +  A    ++M   G  PD
Sbjct: 352 NILINSLCQKGLVDRAIEVLEQMPNYGSTPD 382



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 6/248 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  +   A   + +M +       +T+N LI+  C+ G +  A Q+   M    
Sbjct: 217 VLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYR 276

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY+SL+NG  ++G  + A ++      M   PD  +YN +L   CR     +A 
Sbjct: 277 CTPDIVTYSSLLNGFSEQGLVEVAIQLFR---SMPCKPDIFSYNAVLKGLCRAARWEDAG 333

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +   P+ V+F+ LI    + G +DRA+    +M + G  PD   Y  +ING+
Sbjct: 334 ELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF 393

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + +ALK+   M    C  D ++YN+ L GLCRA+   +A++L  EML     P+ 
Sbjct: 394 SEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNE 450

Query: 241 YTFTTLIH 248
            TF    H
Sbjct: 451 VTFKYANH 458


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 148/426 (34%), Positives = 225/426 (52%), Gaps = 12/426 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ VT+ T I ++C+ G L+ A QL++ M   G  P V  Y++LING  ++G  D+A ++
Sbjct: 223 PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 282

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ ML     P+T  YN  L   C  E   +  E+  EM R+G +P+  +FS LI    +
Sbjct: 283 LNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQ 339

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           N  +D A+    +M+  G  PD V Y IIIN     G V +AL++ + M+   C  D + 
Sbjct: 340 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALG 396

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N +L G CRA+   +A +L  +M          TF  LI   C++G +N A  +F+ M 
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 456

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +    PDIVTY++L++GF + G +E A +L+  M  +   P+  SY  ++ G C      
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWE 513

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  EMVGK   P  V+ N +I   C+ G   +A E L +M + G  PD  +YN LI
Sbjct: 514 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           NGF  +  +D A  L+S M  +   PD I+YN  L G CR  R  D+E ++  M+     
Sbjct: 574 NGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCT 630

Query: 448 PDRSTY 453
           P+  T+
Sbjct: 631 PNEVTF 636



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 158/525 (30%), Positives = 253/525 (48%), Gaps = 86/525 (16%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           V++NTL+  YCR+G L +A +++ +    G    V TY +LI+G C+ GR D A   L  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATG-AANVVTYTALIDGYCRSGRLDDA---LRL 180

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           +  M ++PDT TYNT+L   C  +   EAEE+  EM R    P+ V+F+T I  F +NG 
Sbjct: 181 IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           LDRA+    +M   G  PD V+Y+ +ING+   G V +AL + + ML   C  + V YN 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 297

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD----------------- 253
            L GLC A+   +  +L  EM+ +G  P+  TF+ LI   C++                 
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 254 ------------------GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
                             G ++ AL L + M     KPD + +N ++ GFC+      A+
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDAS 414

Query: 296 KLWA------------------DMISR-----------------KISPNYISYGILINGY 320
           +L A                  DM+ +                 + +P+ ++Y  L+NG+
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G V  A +L+  M     KP + S N ++KG CR+     A E +++MV +   P+ 
Sbjct: 475 SEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           +++N LIN   ++  +D+A  ++ +M N G  PD+ TYN ++ GF  QGR+ D+  +L  
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLST 591

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           M  K   PD  +Y + + G       ++A     EML+    P++
Sbjct: 592 MSCK---PDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNE 633



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 218/417 (52%), Gaps = 12/417 (2%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + + C++  +D A   L +M + G  PD V Y+TLIN +  +G +++A  L+N+M     
Sbjct: 232 IRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---C 288

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP    YN+ + GLC   R +   E++ EM++ G SP+ AT++ L+   C+   +  A E
Sbjct: 289 KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVE 348

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  +M + G  PD V+++ +I   S  G++D AL   R + S    PD + +  ++ G+C
Sbjct: 349 VLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL---RLLNSMVCKPDALGFNAVLKGFC 405

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R     +A ++  +M    C +  +T+N +++ LC+  ++  A  +F +M      PD  
Sbjct: 406 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 465

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+++L++G  + G +  A+ LF  M     KPDI +YN ++ G C+    E A +L A+M
Sbjct: 466 TYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEM 522

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           + +   PN +++ ILIN  C  G V  A  +  +M   G  P + + N +I G+   G  
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
             A + LS M      PD+ISYN+ + G  R E    A  LV++M      P+ +T+
Sbjct: 583 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 175/313 (55%), Gaps = 9/313 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC+++ +DSA   L +ME+ G  PDTV YN +IN+    G +++A +L+NSM    
Sbjct: 333 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV--- 389

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP    +N+++ G C+  R   A E++ +M +        T+N L+   C+   ++ A 
Sbjct: 390 CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYAT 449

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M R    PDIV++S+L+  FS  G ++ A+  FR M      PD   Y  ++ G 
Sbjct: 450 QVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGL 506

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR     +A ++  EM+ K C  + VT+N ++N LC+  ++  A ++  +M   G  PD 
Sbjct: 507 CRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDI 566

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  LI+G  + G ++ AL L   M   S KPD ++YN+ + G C+    + A +L A+
Sbjct: 567 FTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAE 623

Query: 301 MISRKISPNYISY 313
           M+  K +PN +++
Sbjct: 624 MLRNKCTPNEVTF 636



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 6/248 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  +   A   + +M +       +T+N LI+  C+ G +  A Q+   M    
Sbjct: 400 VLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYR 459

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY+SL+NG  ++G  + A ++   M      PD  +YN +L   CR     +A 
Sbjct: 460 CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAG 516

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +   P+ V+F+ LI    + G +DRA+    +M + G  PD   Y  +ING+
Sbjct: 517 ELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF 576

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + +ALK+   M    C  D ++YN+ L GLCRA+   +A++L  EML     P+ 
Sbjct: 577 SEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNE 633

Query: 241 YTFTTLIH 248
            TF    H
Sbjct: 634 VTFKYANH 641



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 38/173 (21%)

Query: 346 VSCNTIIK----------------------------------GYCRSGDASKADEFLSKM 371
           +SCN +IK                                  GYCR G  + A+  L   
Sbjct: 91  ISCNILIKKLCATRRLADAERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGAA 150

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            + G   + ++Y  LI+G+ R   +D A  L++ M    + PD  TYN +L G C   + 
Sbjct: 151 RATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKW 206

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++E ++  MI     P+  T+ T I        L  A +  D+M + G  PD
Sbjct: 207 EEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPD 259


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 257/515 (49%), Gaps = 31/515 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ LCK  ++  A+    EM  + + P  +TYNTLI+ YC++G  E++F++   M    
Sbjct: 593  LIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADN 652

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            ++P + T+N+L+ GL K G  + A+ VL EM   G  PD  T++ L       +    A 
Sbjct: 653  IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAAL 712

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             ++      G+  +  + S L+    + GQ+++A        + GLVP+ VLY  +I+GY
Sbjct: 713  GVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGY 772

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             R G ++ A    D M ++G   D + YN ++   C    +  A+   N+M  +GV P  
Sbjct: 773  SRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSV 832

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T+  LI G+ +    +K  +L   M      P++V+Y TLI+  CK  ++ +A  +  D
Sbjct: 833  ETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 892

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            M  R +SPN   Y +LI+G CS G + +AFR   EM  KGI+  LV+ NT+I G   +G 
Sbjct: 893  MEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGK 952

Query: 361  ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG---------- 410
             ++A++ L ++  +G+ PD  +YN+LI+G+    N+ +  AL  +M+  G          
Sbjct: 953  LAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHL 1012

Query: 411  ---------------------LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                                 L PD++ YN +L  +   G M  +  +  +MIEK +  D
Sbjct: 1013 LISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLD 1072

Query: 450  RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++TY +LI G +    L E     DEM  R   P+
Sbjct: 1073 KTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPE 1107



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 233/456 (51%)

Query: 28   PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
            P    Y   I A  +   + +  +L N M    + P VF YN LI+GLCK  +   A+++
Sbjct: 550  PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQL 609

Query: 88   LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             DEML   L P   TYNTL+   C+  N  ++ ++   M    + P +++F+TL+    +
Sbjct: 610  FDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFK 669

Query: 148  NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
             G ++ A     EMK  G VPD   ++I+ +GY  N     AL + +  ++ G  M+  T
Sbjct: 670  AGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYT 729

Query: 208  YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
             + +LN LC+   + +A+++    + +G+ P+   + T+I G+ + G++  A    D M 
Sbjct: 730  CSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAME 789

Query: 268  QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            ++ +KPD + YN LI  FC++G+ME A +    M  + +SP+  +Y ILI GY       
Sbjct: 790  KQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 849

Query: 328  EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            + F L  EM   G  P +VS  T+I   C+     +A      M   GV P+   YN LI
Sbjct: 850  KCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLI 909

Query: 388  NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            +G   +  ++ AF    +M  +G+  +++TYN ++ G    G++ ++E +L  +  KGL 
Sbjct: 910  DGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLK 969

Query: 448  PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            PD  TY +LI+G+    N++     ++EM   G  P
Sbjct: 970  PDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP 1005



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 250/485 (51%), Gaps = 6/485 (1%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  L K   ++ A+  L EM+ +G  PD  T++ L + Y      + A  +  +    G
Sbjct: 663  LLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSG 722

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            LK   +T + L+N LCK+G+ ++A+E+L   +  GL P+   YNT++    RK ++  A 
Sbjct: 723  LKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGAR 782

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                 M ++G+ PD ++++ LI  F   G ++ A     +MK  G+ P    Y I+I GY
Sbjct: 783  MKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGY 842

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             R     +   +  EM + G + +VV+Y T++N LC+   L EA  +  +M +RGV P+ 
Sbjct: 843  GRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNV 902

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
              +  LI G C  G +  A    + M +K I+ ++VTYNTLIDG    G++ +A  +  +
Sbjct: 903  RIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLE 962

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            +  + + P+  +Y  LI+GY   G+V     L+ EM   GIKPTL + + +I    + G 
Sbjct: 963  ISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGI 1022

Query: 361  ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
                 E   K+  E  + PD + YN +++ +    +MDKAF L  +M  + +  D  TYN
Sbjct: 1023 -----ELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYN 1077

Query: 420  VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             ++ G  + G++ +   ++  M  + + P+  TY  ++ GH    +   A+ ++ EM ++
Sbjct: 1078 SLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEK 1137

Query: 480  GFVPD 484
            G + D
Sbjct: 1138 GLLLD 1142



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 236/435 (54%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           + EA  L  ++  +G+ P   +   L++ L K  +      V   +L+    P    Y  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
            +  + +  ++ +  E+F  M    ++P +  ++ LI    +  Q+  A   F EM +  
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           L+P  + Y  +I+GYC++G   ++ K+R+ M        ++T+NT+L GL +A M+ +A+
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           ++  EM ++G  PD +TF+ L  G+  +   + AL +++      +K +  T + L++  
Sbjct: 678 NVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNAL 737

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK G++EKA ++    +++ + PN + Y  +I+GY   G +  A      M  +G+KP  
Sbjct: 738 CKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDH 797

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++ N +I+ +C  GD   A++ ++KM  +GV P   +YN LI G+ R+   DK F L+ +
Sbjct: 798 LAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKE 857

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ME+ G +P+V++Y  ++   C+  ++ +++++   M ++G++P+   Y  LI+G  S+  
Sbjct: 858 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGK 917

Query: 466 LKEAFRFHDEMLQRG 480
           +++AFRF +EM ++G
Sbjct: 918 IEDAFRFSEEMFKKG 932



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 233/448 (52%), Gaps = 32/448 (7%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++NALCK+ +I+ A+  L     KG+ P+ V YNT+I+ Y R+G L  A   +++M  +G
Sbjct: 733  LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +KP    YN LI   C+ G  + A++ +++M   G+SP   TYN L+    RK    +  
Sbjct: 793  MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 852

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++  EM   G  P++VS+ TLI    +  +L  A +  R+M+  G+ P+  +Y ++I+G 
Sbjct: 853  DLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGC 912

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C  G + +A +  +EM +KG  +++VTYNT+++GL     L EA+D+  E+  +G+ PD 
Sbjct: 913  CSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDV 972

Query: 241  YTFTTLIHGHCKDGNMNKALNLFD-------------------------------IMTQK 269
            +T+ +LI G+   GN+ + + L++                               I  + 
Sbjct: 973  FTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEM 1032

Query: 270  SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            S++PD++ YN ++  +   G+M+KA  L   MI + I  +  +Y  LI G   +G + E 
Sbjct: 1033 SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 1092

Query: 330  FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
              L  EM  + ++P   + + I+KG+C   D   A  +  +M  +G+  D    + L++G
Sbjct: 1093 RSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSG 1152

Query: 390  FVREENMDKAFALVSKMENQGLVPDVIT 417
               E    +A  ++S+M  + L  DVI 
Sbjct: 1153 LKEEWRSKEAENVISEMNGRKL-GDVIV 1179



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 214/429 (49%), Gaps = 19/429 (4%)

Query: 75  LCKKGRCDRAKEVLDEMLQMGLSPDTAT-----------------YNTLLVESCRKEN-- 115
           L ++ R + A+ VL  +L+   +P T+                  ++ LL+     E+  
Sbjct: 438 LLQQNRIETARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKM 497

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +SEA ++F  +   G+ P   S + L+    +  Q    +  F  +  +   P   +Y  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
            I    +   V + L++ + M        V  YN +++GLC+ + + +A+ LF+EML R 
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P   T+ TLI G+CKDGN  K+  + + M   +I+P ++T+NTL+ G  K G +E A 
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            +  +M  +   P+  ++ IL +GY S      A  ++   V  G+K    +C+ ++   
Sbjct: 678 NVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNAL 737

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+ G   KA+E L + +++G+ P+ + YNT+I+G+ R+ ++  A   +  ME QG+ PD 
Sbjct: 738 CKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDH 797

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           + YN ++  FC  G M ++E  + +M  KG++P   TY  LI G+  +    + F    E
Sbjct: 798 LAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKE 857

Query: 476 MLQRGFVPD 484
           M   G +P+
Sbjct: 858 MEDNGTMPN 866



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 235/473 (49%), Gaps = 1/473 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           ++A +F   +  +G++P + +   L++   +         +  ++     +P  F Y   
Sbjct: 500 EAADLFFA-LRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 558

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I    K     +  E+ + M    +SP    YN L+   C+   M +AE++F EM  R +
Sbjct: 559 IQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRL 618

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P +++++TLI  + ++G  +++      MK+  + P  + +  ++ G  + G V +A  
Sbjct: 619 LPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAEN 678

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  EM ++G V D  T++ + +G         A  ++   ++ G+  + YT + L++  C
Sbjct: 679 VLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALC 738

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K+G + KA  +      K + P+ V YNT+IDG+ + G++  A      M  + + P+++
Sbjct: 739 KEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHL 798

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  LI  +C +G +  A +   +M  KG+ P++ + N +I GY R  +  K  + L +M
Sbjct: 799 AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEM 858

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
              G  P+ +SY TLIN   +   + +A  +   ME++G+ P+V  YN+++ G C +G++
Sbjct: 859 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKI 918

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D+      M +KG+  +  TY TLI+G      L EA     E+ ++G  PD
Sbjct: 919 EDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPD 971


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 133/419 (31%), Positives = 233/419 (55%), Gaps = 1/419 (0%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           Y  +IN   +    D +    +EM+  G  P +  +N LL       + ++    F E S
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-S 155

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           +  V  D+ SF  +I      G+++++     E++  G  P+ V+YT +I+G C+ G + 
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           +A  +  EM + G V +  TY  +++GL +  +  +  +++ +M E GVFP+ +T+  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +  CKDG    A  +FD M ++ +  +IVTYNTLI G C+  +  +AN++   M S  I+
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN I+Y  LI+G+C +  + +A  L  ++  +G+ P+LV+ N ++ G+C+ GD S A + 
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           + +M   G+ P  ++Y  LI+ F R +NM+KA  L S ME  GL PDV TY+V++ GFC 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +GRM+++  +   M+EK   P+   Y T++ G+  + +   A R   EM ++   P+ A
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514



 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 246/451 (54%), Gaps = 1/451 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +   +DS+  +  EM  KG  P +  +N L+          + +   N    K 
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK- 158

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V+++  +I G C+ G  +++ ++L E+ + G SP+   Y TL+   C+K  + +A+
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM + G+  +  +++ LI    +NG   +    + +M+  G+ P+   Y  ++N  
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQL 278

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G   +A K+ DEM E+G   ++VTYNT++ GLCR     EA+++ ++M   G+ P+ 
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNL 338

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G C    + KAL+L   +  + + P +VTYN L+ GFCK G+   A K+  +
Sbjct: 339 ITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P+ ++Y ILI+ +    ++ +A +L   M   G+ P + + + +I G+C  G 
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGR 458

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A      MV +  +P+ + YNT++ G+ +E +  +A  L  +ME + L P+V +Y  
Sbjct: 459 MNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           ++   C++ +  ++E ++ +MI+ G+ P  S
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDSGIGPSDS 549



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 247/454 (54%), Gaps = 1/454 (0%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           Y  +INAY +   L+ +    N M  KG  PG   +N+L+  +      ++     +E  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES- 155

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           ++ +  D  ++  ++   C    + ++ ++  E+   G +P++V ++TLI    + G+++
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           +A   F EM   GLV +   YT++I+G  +NG   +  +M ++M E G   ++ TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           N LC+     +A  +F+EM ERGV  +  T+ TLI G C++   N+A  + D M    I 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+++TYNTLIDGFC V ++ KA  L  D+ SR +SP+ ++Y IL++G+C  G  + A ++
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             EM  +GIKP+ V+   +I  + RS +  KA +  S M   G+ PD  +Y+ LI+GF  
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +  M++A  L   M  +   P+ + YN ++ G+C++G  + +  +   M EK L P+ ++
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           Y  +I     +   KEA    ++M+  G  P D+
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDS 549



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 129/376 (34%), Positives = 208/376 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  +I+ AK    EM + G+  +  TY  LI+   + G  ++ F++   M   G
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + TYN ++N LCK GR   A +V DEM + G+S +  TYNTL+   CR+   +EA 
Sbjct: 264 VFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +M   G+ P++++++TLI  F    +L +AL   R++KS GL P  V Y I+++G+
Sbjct: 324 EVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A K+  EM E+G     VTY  +++   R+  + +A  L + M E G+ PD 
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDV 443

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T++ LIHG C  G MN+A  LF  M +K  +P+ V YNT++ G+CK G   +A +L+ +
Sbjct: 444 HTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFRE 503

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +++ PN  SY  +I   C      EA  L  +M+  GI P+    N I +    S  
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRAKNDSHS 563

Query: 361 ASKADEFLSKMVSEGV 376
            S  +E  + MV +G+
Sbjct: 564 RSMDEEEPASMVFDGL 579



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 211/382 (55%), Gaps = 1/382 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+  +I+ +   L E+ + G  P+ V Y TLI+  C++G +E+A  L   M   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L    +TY  LI+GL K G   +  E+ ++M + G+ P+  TYN ++ + C+     +A 
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAF 288

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  RGV+ +IV+++TLIG   R  + + A     +MKS G+ P+ + Y  +I+G+
Sbjct: 289 KVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGF 348

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + +AL +  ++  +G    +VTYN +++G C+    + A  +  EM ERG+ P  
Sbjct: 349 CGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI    +  NM KA+ L   M +  + PD+ TY+ LI GFC  G M +A++L+  
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKS 468

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +K  PN + Y  ++ GYC  G    A RL+ EM  K + P + S   +I+  C+   
Sbjct: 469 MVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 361 ASKADEFLSKMVSEGVDP-DSI 381
           + +A+  + KM+  G+ P DSI
Sbjct: 529 SKEAEGLVEKMIDSGIGPSDSI 550



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 185/347 (53%), Gaps = 34/347 (9%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKG------------------------------- 200
           LY +IIN Y ++  +  ++   +EM++KG                               
Sbjct: 96  LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES 155

Query: 201 ---CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
               V+DV ++  ++ G C A  + ++ DL  E+ E G  P+   +TTLI G CK G + 
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           KA +LF  M +  +  +  TY  LI G  K G  ++  +++  M    + PN  +Y  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           N  C  G   +AF+++ EM  +G+   +V+ NT+I G CR   A++A+E + +M S+G++
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+ I+YNTLI+GF     + KA +L   ++++GL P ++TYN++++GFC++G    +  +
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  M E+G+ P + TYT LI+     +N+++A +    M + G  PD
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPD 442


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 254/475 (53%), Gaps = 7/475 (1%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            + +  +  V+P+++    LI+  CR G  + A+ +++ +   G      + N+L+  L 
Sbjct: 257 LVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALG 316

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS---RRG--V 131
           +     R   +L EM +M + P+  T+  L+   C+   + EA E+F +M+     G  V
Sbjct: 317 RAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLV 376

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIINGYCRNGFVLEAL 190
            PD+++++TLI    + G+ +  L     M+S    +P+ V Y  +I+GYC+   +  A 
Sbjct: 377 EPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAR 436

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++ D+M + G   +VVT NT+++G+C+   +  A + FNEM  +G+  +  T+T LI   
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C   N+ KA+ LFD M +    PD + Y TLI G  + G++++A+ + + M     SP+ 
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +S+ +LING+C    + EA+ +  EM   GIKP  V+ NT+I  + ++GD S A   + K
Sbjct: 557 VSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKK 616

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP-DVITYNVILTGFCRQG 429
           MV EG+ P  ++Y  LI+ +    N+D+A  +   M +   VP + + YN+++   CR+ 
Sbjct: 617 MVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKN 676

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  +  ++  M  KG+ P+ +T+  +  G   +N L +AF   D M +    PD
Sbjct: 677 QVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD 731



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 255/499 (51%), Gaps = 15/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY--PDTVTYNTLINAYCREGFL------EEAFQL 52
           +++ L +  ++D A   L EM Q      P++ T + + +A  +   +      EE   L
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGL 257

Query: 53  MNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCR 112
           ++  +   + P       LI+ LC+ GR DRA +VL  ++++G   + A+ N LL    R
Sbjct: 258 VSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGR 317

Query: 113 KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM---KSAGLV-- 167
                    +  EM    + P++V+F  LI    +  ++D AL  F +M   +S G +  
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVE 377

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGLCRAKMLTEADD 226
           PD + Y  +I+G C+ G   E L + + M  +  C+ + VTYN +++G C+A M+  A +
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           LF++M + GV P+  T  TL+ G CK G +N A+  F+ M  K +K + VTY  LI  FC
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFC 497

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
            V  +EKA +L+ +M+    SP+ I Y  LI+G    G +  A  +  +M   G  P +V
Sbjct: 498 NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIV 557

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           S N +I G+CR     +A E L +M + G+ PD ++YNTLI+ F +  +   A  L+ KM
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNN 465
             +GLVP V+TY  ++  +C  G + ++  I   M     + P+   Y  LIN    +N 
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQ 677

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +  A    D+M  +G  P+
Sbjct: 678 VDLALSLMDDMKVKGVKPN 696



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/393 (34%), Positives = 207/393 (52%), Gaps = 7/393 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEM---EQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNS 55
           ++N LCK  ++D A     +M   E  G  V PD +TYNTLI+  C+ G  EE   L+  
Sbjct: 346 LINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVER 405

Query: 56  M-SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
           M S     P   TYN LI+G CK    + A+E+ D+M + G+ P+  T NTL+   C+  
Sbjct: 406 MRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHG 465

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            ++ A E F EM  +G+  + V+++ LI  F     +++A+  F EM  AG  PD ++Y 
Sbjct: 466 RINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYY 525

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I+G  + G +  A  +  +M E G   D+V++N ++NG CR   L EA ++  EM   
Sbjct: 526 TLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENA 585

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G+ PD  T+ TLI    K G+ + A  L   M ++ + P +VTY  LI  +C  G +++A
Sbjct: 586 GIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEA 645

Query: 295 NKLWADMIS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
            K++ DM S  K+ PN + Y ILIN  C    V  A  L  +M  KG+KP   + N + K
Sbjct: 646 MKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFK 705

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           G       SKA E + +M     +PD I+   L
Sbjct: 706 GLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 249/499 (49%), Gaps = 51/499 (10%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-- 93
           LI  + R   ++E+F + N +     +      N LI+ L +KGR D A  +LDEMLQ  
Sbjct: 165 LIRCFGRAQMVDESFLVYNELCPS--RRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPK 222

Query: 94  MGLSPDTATYNTLLVESCRKENMSEA---EEIFCEMSR---RGVAPDIVSFSTLIGIFSR 147
               P++ T + +     +++ +  A   EEI   +S+     V P+ +  + LI    R
Sbjct: 223 AEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCR 282

Query: 148 NGQLDRA------LM-----------------------------YFREMKSAGLVPDNVL 172
           +G+ DRA      LM                                EMK   + P+ V 
Sbjct: 283 SGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVT 342

Query: 173 YTIIINGYCRNGFVLEALKMRDEM---LEKGCVM--DVVTYNTILNGLCRAKMLTEADDL 227
           + I+IN  C+   V EAL++ ++M      G ++  DV+TYNT+++GLC+     E   L
Sbjct: 343 FGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGL 402

Query: 228 FNEMLERG-VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
              M  +    P+  T+  LI G+CK   +  A  LFD M +  + P++VT NTL+DG C
Sbjct: 403 VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMC 462

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G +  A + + +M  + +  N ++Y  LI  +C++ ++ +A  L+ EM+  G  P  +
Sbjct: 463 KHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAI 522

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
              T+I G  ++G   +A   LSKM   G  PD +S+N LINGF R+  +D+A+ ++ +M
Sbjct: 523 VYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM 582

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           EN G+ PD +TYN +++ F + G    +  ++ +M+++GL P   TY  LI+ +    NL
Sbjct: 583 ENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNL 642

Query: 467 KEAFRFHDEMLQRGFVPDD 485
            EA +   +M     VP +
Sbjct: 643 DEAMKIFRDMSSTSKVPPN 661



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 197/370 (53%), Gaps = 2/370 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEME-QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++ LCK  + +     +  M  Q    P+TVTYN LI+ YC+   +E A +L + M+  
Sbjct: 386 LIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKD 445

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P V T N+L++G+CK GR + A E  +EM   GL  +  TY  L+   C   N+ +A
Sbjct: 446 GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKA 505

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+F EM   G +PD + + TLI   S+ G+LDRA     +MK AG  PD V + ++ING
Sbjct: 506 MELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLING 565

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR   + EA +M  EM   G   D VTYNT+++   +    + A  L  +M++ G+ P 
Sbjct: 566 FCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPT 625

Query: 240 FYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
             T+  LIH +C +GN+++A+ +F D+ +   + P+ V YN LI+  C+  +++ A  L 
Sbjct: 626 VVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLM 685

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            DM  + + PN  ++  +  G      +++AF L   M      P  ++   + +     
Sbjct: 686 DDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAV 745

Query: 359 GDASKADEFL 368
           G+ +K   F+
Sbjct: 746 GETAKLKSFV 755


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 233/462 (50%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G+  DT+T N +IN  CR   +   F ++ +M   GL+P V T  +LINGLC +G   +A
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQA 166

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             ++D M +M    D  TY  L+   C+  +   A E   +M  R   P++V +ST++  
Sbjct: 167 VGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDG 226

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             ++G +  AL    EM   G+ P+ V Y  +I G C  G   E   + DEM++ G  +D
Sbjct: 227 LCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLD 286

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + T N +++  C+   + +A  +   M+  G  PD +T+ +LIH +C    MN+A+ +F 
Sbjct: 287 LQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M  +   PDIV + +LI G+CK   + K   L  +M      P+ +++  LI G+C  G
Sbjct: 347 LMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAG 406

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               A  L+  M   G  P L +C  I+ G C+    S+A      M    +D + + Y+
Sbjct: 407 RPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYS 466

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L++G      ++ A+ L S +  +GL  +V TY +++ G C+QG +  +E +L  M E 
Sbjct: 467 ILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEEN 526

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G  PD  TY   + G +++  +  + ++   M  +GF  D A
Sbjct: 527 GCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAA 568



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 238/464 (51%), Gaps = 1/464 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+   +      L  M + G+ P  +T   LIN  C +G + +A  L++ M    
Sbjct: 118 VINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMR 177

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V+TY  LINGLCK G    A E L +M +    P+   Y+T++   C+   +SEA 
Sbjct: 178 YPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEAL 237

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EMS +GV P++V+++ LI      G+         EM   G+  D     I+++ +
Sbjct: 238 NLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAF 297

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V++A  +   M+  G   DV TYN++++  C    + EA  +F+ M+ RG  PD 
Sbjct: 298 CKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDI 357

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             FT+LIHG CKD N+NK ++L + M +    PD+VT+ TLI GFC+ G    A +L+ +
Sbjct: 358 VVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLN 417

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +  ++++G C    ++EA  L   M    +   +V  + ++ G C +G 
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E  S +  +G+  +  +Y  +I G  ++ ++DKA  L+  ME  G +PD  TYNV
Sbjct: 478 LNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNV 537

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            + G   +  +  S   L  M +KG + D +T    IN ++S N
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITIN-YLSTN 580



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 232/485 (47%), Gaps = 4/485 (0%)

Query: 5   LCKDHK---IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGKG 60
           LCK  K   ID A      M      P    +  L+    R      A  L+  + S  G
Sbjct: 48  LCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLG 107

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++    T N +IN LC+         VL  M ++GL P   T   L+   C + N+++A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAV 167

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M +     D+ ++  LI    + G    A+ + R+M+     P+ V+Y+ I++G 
Sbjct: 168 GLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V EAL +  EM  KG   ++VTY  ++ GLC      E   L +EM++ G+  D 
Sbjct: 228 CKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDL 287

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T   L+   CK+G + +A ++   M      PD+ TYN+LI  +C   +M +A +++  
Sbjct: 288 QTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHL 347

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+SR   P+ + +  LI+G+C   ++ +   L  EM   G  P +V+  T+I G+C++G 
Sbjct: 348 MVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGR 407

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E    M   G  P+  +   +++G  +   + +A +L   ME   L  +++ Y++
Sbjct: 408 PLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSI 467

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G C  G+++ +  +   +  KGL  +  TYT +I G   Q +L +A      M + G
Sbjct: 468 LLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENG 527

Query: 481 FVPDD 485
            +PD+
Sbjct: 528 CLPDN 532


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 252/478 (52%), Gaps = 3/478 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K D A   L   + KG  P  + YN ++    ++  +EEA ++   M    + P V TYN
Sbjct: 105 KFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYN 163

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI+ LC++G+ + A E+ D+M + GL P+  T N ++   C+ + + EA  IF  M  +
Sbjct: 164 ILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 223

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
              P+ V+FS+LI    + G++D A   + +M   G VP  ++YT +I  + + G   + 
Sbjct: 224 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 283

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            K+  EM+  GC  D+   NT ++ + +A    +   LF E+   G  PD  +++ LIHG
Sbjct: 284 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 343

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
             K G  N+   LF  M ++    D   YN +IDGFCK G++ KA +L  +M  +   P 
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 403

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++YG +I+G   +  + EA+ L+ E    GIK  +V  +++I G+ + G   +A   + 
Sbjct: 404 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 463

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +++ +G+ P+  ++N L++  V+ E +++A      M++    P+ ITY++++ G CR  
Sbjct: 464 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV- 522

Query: 430 RMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           R  +   + W+ ++K GL P+  TYTT+I+G     N+ EA          G +PD A
Sbjct: 523 RKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSA 580



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 244/469 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC++ K+++A     +ME+ G++P+ +T N +I+  C+   LEEA  +   M  K 
Sbjct: 165 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 224

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T++SLI+GL K GR D A  + ++ML  G  P    Y +L+    +     +  
Sbjct: 225 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 284

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ EM   G +PD+   +T +    + G+ ++    FRE+ + G +PD   Y+I+I+G 
Sbjct: 285 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 344

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   E  ++   M E+GCV+D   YN +++G C++  + +A  L  EM  +G  P  
Sbjct: 345 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 404

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I G  K   +++A  LF+      IK ++V Y++LIDGF KVG +++A  +  +
Sbjct: 405 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + ++PN  ++  L++       + EA   +  M      P  ++ + +I G CR   
Sbjct: 465 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 524

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M   G+ P++I+Y T+I+G  +  N+ +A  L S+ +  G +PD  +YN 
Sbjct: 525 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 584

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++ G     +  D+  +      KG N    T   L++       L++A
Sbjct: 585 MIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 190/399 (47%), Gaps = 11/399 (2%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG----------I 144
           G  P +     L+    +   + EA +I   M +    P   +++ LIG          +
Sbjct: 5   GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             +  +LD A+  F +++    VP    Y  +I GY   G   EA  + +    KG +  
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           V+ YN IL  L + + + EA  +F EM +R   P+  T+  LI   C++G +N AL + D
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +  + P+++T N +ID  CK  ++E+A  ++  M  +  +PN +++  LI+G    G
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A+ L+ +M+  G  P  +   ++I+ + + G      +   +MV  G  PD    N
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           T ++   +    +K  AL  ++   G +PD  +Y++++ G  + G  +++  + + M E+
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 363

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G   D   Y  +I+G      + +A++  +EM  +G  P
Sbjct: 364 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPP 402


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 146/438 (33%), Positives = 234/438 (53%), Gaps = 18/438 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G +P  VT+NTL++  C E  + EA  L + M    
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC--- 77

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V T+ +L+NGLC++GR   A  +LD M++ GL P+  TY T++   C+  +   A 
Sbjct: 78  -KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M     + PD+V +S +I    ++G+   A   F EM+  G+ PD V Y+ +ING
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   EA ++  EML +    DVVT++ ++N L +   L  A DL  EM+  GV P+
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKS------------IKPDIVTYNTLIDGFCK 287
             T  TL+ G C  G +  AL +F  M QKS            ++PD+ TYN LI G   
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAM-QKSMMDIDATHAFNGVEPDVQTYNILISGLIN 315

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G+  +A +L+ +M  R I P+ ++Y  +ING C    + EA +++  M  K   P +V+
Sbjct: 316 EGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVT 375

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            NT+I GYC++G      E   +M   G+  ++I+Y TLI GF +  N++ +  +  +M 
Sbjct: 376 FNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI 435

Query: 408 NQGLVPDVITYNVILTGF 425
           + G+ PD IT   +LTG 
Sbjct: 436 SSGVYPDTITIRNMLTGL 453



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 231/432 (53%), Gaps = 16/432 (3%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           ++++N LI   C   +   A     ++ ++G  P   T+NTLL   C ++ +SEA ++F 
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           +M +    P++V+F+TL+    R G++  A+     M   GL P+ + Y  I++G C+ G
Sbjct: 75  QMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 185 FVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
             + AL +  +M E   +  DVV Y+ I++GL +    T+A +LF EM ++G+FPD  T+
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           + +I+G C  G  ++A  L   M  + I PD+VT++ LI+   K G++  A  L  +MIS
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEM-----------VGKGIKPTLVSCNTII 352
             + PN ++   L++G C  G + +A  ++  M              G++P + + N +I
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G    G   +A+E   +M   G+ PD+++Y+++ING  ++  +D+A  +   M ++   
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+++T+N ++TG+C+ G + D   +   M  +G+  +  TY TLI G     N+  +   
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430

Query: 473 HDEMLQRGFVPD 484
             EM+  G  PD
Sbjct: 431 FQEMISSGVYPD 442



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 240/460 (52%), Gaps = 16/460 (3%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D  ++N LI  +C    L  A      ++  G  P + T+N+L++GLC +   DR  E L
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVE---DRVSEAL 70

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           D   QM   P+  T+ TL+   CR+  + EA  +   M   G+ P+ +++ T++    + 
Sbjct: 71  DLFHQM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 149 GQLDRALMYFREMKS-AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           G    AL   R+M+  + + PD V+Y+ II+G  ++G   +A  +  EM +KG   D+VT
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+ ++NG C +   +EA  L  EML R + PD  TF+ LI+   K+G++N A +L   M 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-----------KISPNYISYGIL 316
              + P++VT NTL+DG C  G+++ A +++  M               + P+  +Y IL
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+G  + G   EA  L+ EM  +GI P  V+ +++I G C+     +A +    M S+  
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+ +++NTLI G+ +   +D    L  +M  +G+V + ITY  ++ GF + G ++ S  
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           I   MI  G+ PD  T   ++ G  S+  LK A    +E+
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 231/419 (55%), Gaps = 16/419 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC + ++  A     +M +    P+ VT+ TL+N  CREG + EA  L++ M   G
Sbjct: 56  LLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG 111

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
           L+P   TY ++++G+CK G    A  +L +M ++  + PD   Y+ ++    +    ++A
Sbjct: 112 LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDA 171

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +F EM  +G+ PDIV++S +I  F  +G+   A    +EM    + PD V ++ +IN 
Sbjct: 172 QNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINA 231

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER----- 234
             + G +  A  +  EM+  G   +VVT NT+L+GLC +  L +A ++F  M +      
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291

Query: 235 ------GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
                 GV PD  T+  LI G   +G   +A  L++ M  + I PD VTY+++I+G CK 
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
             +++A +++  M S+  SPN +++  LI GYC  G V +   L+ EM  +GI    ++ 
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITY 411

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            T+I+G+ + G+ + + +   +M+S GV PD+I+   ++ G   +E + +A A++ +++
Sbjct: 412 ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
           G  I   + S N +IK +C       A     K+   G  P  +++NTL++G   E+ + 
Sbjct: 8   GLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           +A  L  +M      P+V+T+  ++ G CR+GR+ ++  +L RM+E GL P++ TY T++
Sbjct: 68  EALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +G     +   A     +M +   +  D 
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDV 152


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 200/335 (59%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK+  I  AK+   E+ ++G+ P TV++NTLIN  C+   L+E F+L  +M    
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY+ LI+GLCK+GR D A+++ DEM Q GL P+  T+  L+   CR   +  A 
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAM 348

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + +M   GV PD+V ++TL+    + G +++A     EM+  G+ PD + YT +I+GY
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGY 408

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A+++R  M E+G V+D V +  +++G CR   + +A+    EM+E G+ PD 
Sbjct: 409 CKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I G+CK GN+     L   M     KP ++TYN L++G CK G+M+ AN L   
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
           M++  ++P+ I+Y IL+ G+C  G   +  +L  E
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 240/449 (53%), Gaps = 3/449 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K  +A +F   ++  G       ++ L+ AY   GF+ +A Q    +     +       
Sbjct: 133 KDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCG 192

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            L++ +              E+L+ G  P    YN L+ + C++ ++ +A+ IF E+ +R
Sbjct: 193 YLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKR 252

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G+ P  VSF+TLI    ++  LD      + M+   + PD   Y+++I+G C+ G +  A
Sbjct: 253 GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            ++ DEM ++G   + +T+  +++G CR++ +  A + +++ML  GV PD   + TL++G
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK G++NKA  L D M    +KPD +TY TLIDG+CK G++E A ++   M    +  +
Sbjct: 373 LCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            +++  LI+G+C  G V +A R   EMV  G+KP   +   +I GYC+ G+     + L 
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M   G  P  I+YN L+NG  ++  M  A  L+  M N G+ PD ITYN++L G C+ G
Sbjct: 493 EMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           +  D   +L    EKGL  D + YT+L++
Sbjct: 553 KAED---LLKLRNEKGLIVDYAYYTSLVS 578



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 206/365 (56%), Gaps = 3/365 (0%)

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           + E+   G  P +  ++ LI  F + G +  A + F E++  GL P  V +  +ING C+
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           +  + E  +++  M E     DV TY+ +++GLC+   L  A+ LF+EM +RG+ P+  T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           FT LI G C+   ++ A+N +  M    +KPD+V YNTL++G CKVG++ KA KL  +M 
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMR 390

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              + P+ I+Y  LI+GYC  G +  A  +   M  +G+    V+   +I G+CR G   
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            A+  L +MV  G+ PD  +Y  +I+G+ ++ N+   F L+ +M+  G  P VITYNV++
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G C+QG+M ++ ++L  M+  G+ PD  TY  L+ GH      ++  +  +E   +G +
Sbjct: 511 NGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLI 567

Query: 483 PDDAF 487
            D A+
Sbjct: 568 VDYAY 572



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 208/408 (50%), Gaps = 46/408 (11%)

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           C   N   A ++F E         I+ F     + SR G+   A ++   + +AG    N
Sbjct: 105 CAMANFLSAHQMFQECQ------SIIRF-----LVSRKGKDSAASVFAAILDTAGTRCSN 153

Query: 171 VLYTIIINGYCRNGFVLEALK-----------------------------------MRDE 195
            ++  ++  Y  +GFV +A++                                      E
Sbjct: 154 FVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSE 213

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           +LE G    V  YN ++N  C+   + +A  +FNE+ +RG+ P   +F TLI+G CK  N
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +++   L   M +  I PD+ TY+ LI G CK G ++ A +L+ +M  R + PN I++  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LI+G C    +  A   +++M+  G+KP LV  NT++ G C+ GD +KA + + +M   G
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           + PD I+Y TLI+G+ +E +++ A  +   M  +G+V D + +  +++GFCR GR+ D+E
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             L  M+E G+ PD +TYT +I+G+  + N+K  F+   EM   G  P
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 89/171 (52%)

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
           G L++   +       +  + E++  G  P +   N +I  +C+ G    A    +++  
Sbjct: 192 GYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRK 251

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+ P ++S+NTLING  +  N+D+ F L   ME   + PDV TY+V++ G C++GR+  
Sbjct: 252 RGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDV 311

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +E +   M ++GL P+  T+T LI+G      +  A   + +ML  G  PD
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPD 362


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 230/464 (49%), Gaps = 4/464 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G  PD  T+N+LI  YCR   ++ A  L + M  +G    V +Y +LI GLC+ GR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A E+  EM Q    PD   Y  L+   C  E   E   +   M   G  P   +++ 
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++    R  +   A    +EM   GL P  V  T +IN YC+ G + +AL++ + M  +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C  +V TYN ++ G C    + +A  L N+M   GV PD  T+  LI G C DG++  A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L  +M    +  D  TYN LI+  CK G  ++A  L+  + +R I PN +++  LING 
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G    A++   +MV  G  P   + ++ I+  C+   + +   F+ +M+ + V P +
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++Y  +I+  ++E N         +M + G  PDV+TY   +  +C +GR++++E +L  
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 416

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M + G+  D   Y TL++GH S      A     +M     VP+
Sbjct: 417 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 460



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 234/468 (50%), Gaps = 5/468 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+ +++D A+    +M  +G   D V+Y TLI   C  G ++EA +L   M    
Sbjct: 16  LIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD--- 72

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P +  Y +L+ GLC   R +    +L  M ++G  P T  Y  ++   CR+    EAE
Sbjct: 73  -QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAE 131

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +G+AP +V+ + +I  + + G++  AL     MK  G  P+   Y  ++ G+
Sbjct: 132 EMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGF 191

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A+ + ++M   G   D VTYN ++ G C    +  A  L   M   G+  D 
Sbjct: 192 CNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 251

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+  LI+  CKDG  ++A +LFD +  + IKP+ VT+N+LI+G CK G+ + A K    
Sbjct: 252 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEK 311

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S   +P+  +Y   I   C M    E      EM+ K +KP+ V+   +I    +  +
Sbjct: 312 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 371

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                    +MVS G +PD ++Y T +  +  E  +++A  ++ +M   G+  D + YN 
Sbjct: 372 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 431

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           ++ G    G+   +  IL +M      P++ TY  L+  H+ +  L E
Sbjct: 432 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR-HLVRMRLVE 478



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 237/486 (48%), Gaps = 21/486 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  +ID A     EM+Q    PD   Y  L+   C     EE   ++  M   G
Sbjct: 51  LIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELG 106

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P    Y ++++  C++ +   A+E+L EM + GL+P   T   ++   C++  MS+A 
Sbjct: 107 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 166

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  RG  P++ +++ L+  F   G++ +A+    +M++ G+ PD V Y ++I G 
Sbjct: 167 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 226

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G +  A ++   M   G + D  TYN ++N LC+     +A  LF+ +  RG+ P+ 
Sbjct: 227 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 286

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF +LI+G CK G  + A    + M      PD  TY++ I+  CK+   ++      +
Sbjct: 287 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 346

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+ ++Y I+I+      +     R W EMV  G  P +V+  T ++ YC  G 
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 406

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A+  L +M   GV  D+++YNTL++G       D A +++ +M +   VP+  TY +
Sbjct: 407 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 466

Query: 421 ILTGFCRQGRMHD----SELILWRMIE-------------KGLNPDRSTYTTLINGHVSQ 463
           +L    R   + D    +   +W+ IE                 P+  TY++++ G    
Sbjct: 467 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 526

Query: 464 NNLKEA 469
              +EA
Sbjct: 527 GRTEEA 532



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 249/511 (48%), Gaps = 35/511 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C++ K   A+  L EM +KG+ P  VT   +INAYC+EG + +A +++  M  +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V+TYN+L+ G C +G+  +A  +L++M   G++PD  TYN L+   C   ++  A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+  D  +++ LI    ++G+ D+A   F  +++ G+ P+ V +  +ING 
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G    A K  ++M+  GC  D  TY++ +  LC+ K   E      EML++ V P  
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +IH   K+ N       +  M      PD+VTY T +  +C  G + +A  +  +
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 416

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR--- 357
           M    ++ + ++Y  L++G+ S+G    A  +  +M      P   +   +++   R   
Sbjct: 417 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRL 476

Query: 358 ---------SG--------------DASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
                    +G              D  K +EFL         P+S +Y++++ GF  + 
Sbjct: 477 VEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL---------PNSGTYSSILEGFSEDG 527

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
             ++A +LVS M+   +  +   Y  ++T FC+  R  D+ +++  MI+ G  P   +Y 
Sbjct: 528 RTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQ 587

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            L++G + +    +A         + + PD+
Sbjct: 588 HLLSGLICEGQTDKAKEIFMNSRWKDYSPDE 618



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 207/438 (47%), Gaps = 17/438 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C D  I+SA   L  ME  G+  D  TYN LINA C++G  ++A  L +S+  +G
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   T+NSLINGLCK G+ D A + L++M+  G +PDT TY++ +   C+ +   E  
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM ++ V P  V+++ +I    +          + EM S+G  PD V YT  +  Y
Sbjct: 342 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 401

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA  +  EM + G  +D + YNT+++G         A  +  +M      P+ 
Sbjct: 402 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 461

Query: 241 YTFTTLIH-----------------GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           +T+  L+                  G  K   +     LFD+M +    P+  TY+++++
Sbjct: 462 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 521

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           GF + G  E+A  L + M    IS N   Y  L+  +C      +A+ L   M+  G  P
Sbjct: 522 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 581

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            L+S   ++ G    G   KA E       +   PD I +  +I+G +++ + D +  ++
Sbjct: 582 QLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 641

Query: 404 SKMENQGLVPDVITYNVI 421
             +E     P   TY ++
Sbjct: 642 IMLERMNCRPSHQTYAML 659



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM   G  PD VTY T + AYC EG L EA  ++  MS  G+      YN+L++G    G
Sbjct: 381 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 440

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-----------------NMSEAEEI 122
           + D A  +L +M  +   P+  TY  LL    R                    +++   +
Sbjct: 441 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGL 500

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           F  M +    P+  ++S+++  FS +G+ + A      MK   +  +  +YT ++  +C+
Sbjct: 501 FDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCK 560

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           +   L+A  +   M++ G +  +++Y  +L+GL       +A ++F     +   PD   
Sbjct: 561 SKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV 620

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
           +  +I G  K G+ + +  +  ++ + + +P   TY  L +
Sbjct: 621 WKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 661



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 52/109 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   CK  +   A + +C M Q G  P  ++Y  L++    EG  ++A ++  +   K 
Sbjct: 554 LVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKD 613

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVE 109
             P    +  +I+GL KKG  D ++E++  + +M   P   TY  L  E
Sbjct: 614 YSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEE 662


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  257 bits (657), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 146/438 (33%), Positives = 234/438 (53%), Gaps = 18/438 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C   K+  A     ++ + G +P  VT+NTL++  C E  + EA  L + M    
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC--- 77

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V T+ +L+NGLC++GR   A  +LD M++ GL P+  TY T++   C+  +   A 
Sbjct: 78  -KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M     + PD+V +S +I    ++G+   A   F EM+  G+ PD V Y+ +ING
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G   EA ++  EML +    DVVT++ ++N L +   L  A DL  EM+  GV P+
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKS------------IKPDIVTYNTLIDGFCK 287
             T  TL+ G C  G +  AL +F  M QKS            ++PD+ TYN LI G   
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAM-QKSMMDIDATHAFNGVEPDVQTYNILISGLIN 315

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G+  +A +L+ +M  R I P+ ++Y  +ING C    + EA +++  M  K   P +V+
Sbjct: 316 EGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVT 375

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            NT+I GYC++G      E   +M   G+  ++I+Y TLI GF +  N++ +  +  +M 
Sbjct: 376 FNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI 435

Query: 408 NQGLVPDVITYNVILTGF 425
           + G+ PD IT   +LTG 
Sbjct: 436 SSGVYPDTITIRNMLTGL 453



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 231/432 (53%), Gaps = 16/432 (3%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           ++++N LI   C   +   A     ++ ++G  P   T+NTLL   C ++ +SEA ++F 
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           +M +    P++V+F+TL+    R G++  A+     M   GL P+ + Y  I++G C+ G
Sbjct: 75  QMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 185 FVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
             + AL +  +M E   +  DVV Y+ I++GL +    T+A +LF EM ++G+FPD  T+
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           + +I+G C  G  ++A  L   M  + I PD+VT++ LI+   K G++  A  L  +MIS
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEM-----------VGKGIKPTLVSCNTII 352
             + PN ++   L++G C  G + +A  ++  M              G++P + + N +I
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G    G   +A+E   +M   G+ PD+++Y+++ING  ++  +D+A  +   M ++   
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+++T+N ++TG+C+ G + D   +   M  +G+  +  TY TLI G     N+  +   
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430

Query: 473 HDEMLQRGFVPD 484
             EM+  G  PD
Sbjct: 431 FQEMISSGVYPD 442



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 241/460 (52%), Gaps = 16/460 (3%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D  ++N LI  +C    L  A      ++  G  P + T+N+L++GLC +   DR  E L
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVE---DRVSEAL 70

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           D   QM   P+  T+ TL+   CR+  + EA  +   M   G+ P+ +++ T++    + 
Sbjct: 71  DLFHQM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 149 GQLDRALMYFREMKS-AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           G    AL   R+M+  + + PD V+Y+ II+G  ++G   +A  +  EM +KG   D+VT
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y+ ++NG C +   +EA  L  EML R + PD  TF+ LI+   K+G++N A +L   M 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-----------KISPNYISYGIL 316
              + P++VT NTL+DG C  G+++ A +++  M               + P+  +Y IL
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+G  + G   EA  L+ EM  +GI P  V+ +++I G C+     +A +    M S+  
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+ +++NTLI G+ +   +D    L  +M  +G+V + ITY  ++ GF + G ++ S  
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           I   MI  G+ PD  T   ++ G  S+  LK+A    +E+
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 231/419 (55%), Gaps = 16/419 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC + ++  A     +M +    P+ VT+ TL+N  CREG + EA  L++ M   G
Sbjct: 56  LLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG 111

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEA 119
           L+P   TY ++++G+CK G    A  +L +M ++  + PD   Y+ ++    +    ++A
Sbjct: 112 LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDA 171

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +F EM  +G+ PDIV++S +I  F  +G+   A    +EM    + PD V ++ +IN 
Sbjct: 172 QNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINA 231

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER----- 234
             + G +  A  +  EM+  G   +VVT NT+L+GLC +  L +A ++F  M +      
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291

Query: 235 ------GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
                 GV PD  T+  LI G   +G   +A  L++ M  + I PD VTY+++I+G CK 
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
             +++A +++  M S+  SPN +++  LI GYC  G V +   L+ EM  +GI    ++ 
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITY 411

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            T+I+G+ + G+ + + +   +M+S GV PD+I+   ++ G   +E + KA A++ +++
Sbjct: 412 ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
           G  I   + S N +IK +C       A     K+   G  P  +++NTL++G   E+ + 
Sbjct: 8   GLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           +A  L  +M      P+V+T+  ++ G CR+GR+ ++  +L RM+E GL P++ TY T++
Sbjct: 68  EALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +G     +   A     +M +   +  D 
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDV 152


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 247/466 (53%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K  +I  A   L EME  G  P  VTYN+LI+AY R+G LEEA +L N M  +G+K  VF
Sbjct: 151 KSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVF 210

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TY ++++G  + G+ + A  V +EM   G  P+  T+N L+     +   +E  ++F E+
Sbjct: 211 TYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEI 270

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
                 PDIV+++TL+ +F +NG        F+EMK  G VP+   Y  +I+ Y R G  
Sbjct: 271 KICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSF 330

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A+ M   ML+ G   D+ TYN +L  L R  +  +++ +  EM +    P+  T  +L
Sbjct: 331 DQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSL 390

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           +H +     + + L L + +    I+P  V   TL+    K   + +A + + ++  +  
Sbjct: 391 LHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGF 450

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           SP+  +   +I  Y     VT+   +   M   G  P+L + N+++  + +S +  +++E
Sbjct: 451 SPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEE 510

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            L +++++G+ PD ISYNT+I  + R   M +A  + S+M   GL+PDVITYN  +  + 
Sbjct: 511 VLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYA 570

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
                 ++  ++  MI+ G  P+++TY ++I+G+   N   +A +F
Sbjct: 571 ADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKF 616



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 245/501 (48%), Gaps = 37/501 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFL-EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           M+  G+ PD  TYNTLI   CR G L EEA  +   M   G  P   TYN+L++   K  
Sbjct: 95  MKNAGILPDEYTYNTLITC-CRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSR 153

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A EVL EM   G SP   TYN+L+    R   + EA E+  +M  RG+  D+ +++
Sbjct: 154 RIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYT 213

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            ++  F R G+ + A+  F EM++AG  P+   +  +I  +   G   E +K+ +E+   
Sbjct: 214 AMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKIC 273

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
            CV D+VT+NT+L    +  M +E   +F EM   G  P+  T+ TLI  + + G+ ++A
Sbjct: 274 CCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQA 333

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + ++  M    I PD+ TYN ++    + G  E++ K+ A+M      PN +++  L++ 
Sbjct: 334 MAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHA 393

Query: 320 YCSMGHV-----------------------------------TEAFRLWYEMVGKGIKPT 344
           Y +   +                                    EA R + E+  KG  P 
Sbjct: 394 YANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPD 453

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           L + N +I  Y R    +K +E L+ M   G  P   +YN+L+    + EN +++  ++ 
Sbjct: 454 LSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLK 513

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++  +G+ PD+I+YN ++  +CR GRM ++  I   M E GL PD  TY T +  + + +
Sbjct: 514 EILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADS 573

Query: 465 NLKEAFRFHDEMLQRGFVPDD 485
             +EA      M++ G  P+ 
Sbjct: 574 MFEEAIDVVCYMIKHGCKPNQ 594



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 247/521 (47%), Gaps = 38/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K+ K+  A   L  + + G  PD   Y +LI A    G   EA  +   M  +G
Sbjct: 4   IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63

Query: 61  LKPGVFTYNSLINGLCKKGR-CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-SE 118
            KP + TYN ++N   K G   ++   + + M   G+ PD  TYNTL+   CR+ ++  E
Sbjct: 64  CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLIT-CCRRGSLYEE 122

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F +M   G  PD V+++TL+ ++ ++ ++  A+   REM+  G  P  V Y  +I+
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            Y R+G + EA++++++M+E+G  +DV TY  +L+G  R      A  +F EM   G  P
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKP 242

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF  LI  H   G   + + +F+ +      PDIVT+NTL+  F + G   + + ++
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M      P   +Y  LI+ Y   G   +A  ++  M+  GI P L + N ++    R 
Sbjct: 303 KEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARG 362

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS-------------- 404
           G   ++++ L++M      P+ +++ +L++ +   + + +  AL                
Sbjct: 363 GLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLL 422

Query: 405 ---------------------KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
                                +++ +G  PD+ T N ++  + R+  +  +  IL  M E
Sbjct: 423 KTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKE 482

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G  P  +TY +L+  H    N + +     E+L +G  PD
Sbjct: 483 SGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPD 523



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 180/353 (50%), Gaps = 6/353 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD VT+NTL+  + + G   E   +   M   G  P   TYN+LI+   + G  D+A  +
Sbjct: 277 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAM 336

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              ML  G++PD +TYN +L    R     ++E+I  EM      P+ ++  +L+  ++ 
Sbjct: 337 YKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYAN 396

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYT--IIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
             ++ R L    E+ S  + P  VL    +++N  C    +LEA +   E+  KG   D+
Sbjct: 397 GKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKC--DLLLEAERAFLELKRKGFSPDL 454

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T N ++    R +M+T+ +++ N M E G  P   T+ +L++ H +  N  ++  +   
Sbjct: 455 STLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKE 514

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +  K IKPDI++YNT+I  +C+ G M++A+ ++++M    + P+ I+Y   +  Y +   
Sbjct: 515 ILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSM 574

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
             EA  +   M+  G KP   + N++I GYC+      A +F+S +    +DP
Sbjct: 575 FEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSL--HELDP 625



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 168/348 (48%), Gaps = 3/348 (0%)

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + +I +  + G++  A      +   G  PD   YT +I     NG   EA+ +  +M E
Sbjct: 2   AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 199 KGCVMDVVTYNTILNGLCRAKM-LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM- 256
           +GC   ++TYN ILN   +  M   +   LF  M   G+ PD YT+ TLI   C+ G++ 
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITC-CRRGSLY 120

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            +A  +F+ M      PD VTYNTL+D + K   +++A ++  +M     SP+ ++Y  L
Sbjct: 121 EEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSL 180

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+ Y   G + EA  L  +MV +GIK  + +   ++ G+ R+G    A     +M + G 
Sbjct: 181 ISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGC 240

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+  ++N LI          +   +  +++    VPD++T+N +L  F + G   +   
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSG 300

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   M   G  P+R TY TLI+ +    +  +A   +  ML  G  PD
Sbjct: 301 VFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPD 348



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/406 (22%), Positives = 187/406 (46%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++   +  K +SA     EM   G  P+  T+N LI  +   G   E  ++   +    
Sbjct: 215 MLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICC 274

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + T+N+L+    + G       V  EM ++G  P+  TYNTL+    R  +  +A 
Sbjct: 275 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAM 334

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++  M   G+ PD+ +++ ++   +R G  +++     EM+     P+ + +  +++ Y
Sbjct: 335 AMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAY 394

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                +   L + +E+         V   T++    +  +L EA+  F E+  +G  PD 
Sbjct: 395 ANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDL 454

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T   +I  + +   + K   + + M +    P + TYN+L+    +    E++ ++  +
Sbjct: 455 STLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKE 514

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++++ I P+ ISY  +I  YC  G + EA  ++ EM   G+ P +++ NT +  Y     
Sbjct: 515 ILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSM 574

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
             +A + +  M+  G  P+  +YN++I+G+ +    D A   +S +
Sbjct: 575 FEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSL 620



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C++ ++  A     EM + G+ PD +TYNT + +Y  +   EEA  ++  M   G
Sbjct: 530 VIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHG 589

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            KP   TYNS+I+G CK  R D A + +  + ++
Sbjct: 590 CKPNQNTYNSVIDGYCKLNRRDDAIKFISSLHEL 623


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 248/479 (51%), Gaps = 5/479 (1%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C ++ + +  +    M + GV+P+  TYN L+ A C+   +  A ++++ M+ KG  P  
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            TY ++++ LCK  R D A EVL  M      P  A+YN +++  CR+  M E   +  +
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSD 249

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  RG+ P++++++T++  F + G+L  A      M   G  P+ V +T ++ G   +G 
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V +AL M   M+ +G     V+YN ++ GLC    L  A  + N M + G FP+  T++T
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI G  K G++  A+++++ M++   KP++V Y  ++D FCK     +A  L   M+   
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             PN +++  LI   C    V  A  +++EM   G  P   + N +I G  R G+   A 
Sbjct: 430 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 489

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
             +++M S G++   ++YNT+++G  +     +A   V KM  QG+ P+  T++ I+  +
Sbjct: 490 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 549

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C++G +  +  +L  M     + +   YT L+    +Q+ L +A  +  +ML  G  P+
Sbjct: 550 CKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPN 608



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 248/459 (54%), Gaps = 5/459 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC+++++ +A+  L EM +KG  PD VTY T+++  C+   L+EA +++ +M    
Sbjct: 165 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM---- 220

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   +YN+++  LC++ R      V+ +M+  GL P+  TY T++   C+   +  A 
Sbjct: 221 -PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 279

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   G  P++V+F+ L+     +G++  AL  +R M + G  P  V Y I+I G 
Sbjct: 280 AILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 339

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A  + + M + GC  +V TY+T+++G  +A  L  A  ++N+M   G  P+ 
Sbjct: 340 CSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 399

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T ++   CK    N+A +L D M  ++  P+ VT+NTLI   C    + +A  ++ +
Sbjct: 400 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 459

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y  LI+G    G+  +A  +  EM   GI+ +LV+ NT++ G C++  
Sbjct: 460 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 519

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           + +A  F+ KM+ +G+ P++ +++ +I+ + +E  +  A  ++  M       +++ Y +
Sbjct: 520 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 579

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++   C Q ++ D+   L +M+ +G+ P+  T+  L+ G
Sbjct: 580 LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 618



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 201/435 (46%), Gaps = 33/435 (7%)

Query: 83  RAKEVLDEMLQMGL--SPDTATYNTLLVESCRKENMSEAEE-IFCEMSRRGVAPDIVSFS 139
           RA++VL    +  L   P +    T     C  ENM  A   ++  M + GV P++ +++
Sbjct: 104 RAQDVLPRRARPWLRAPPPSRGSTTTSSTRCCGENMVGAVVLVYDNMRKDGVHPNVFTYN 163

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR----------------- 182
            L+    +N ++  A     EM   G  PD+V Y  I++  C+                 
Sbjct: 164 LLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPV 223

Query: 183 ----NGFVL---------EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
               N  VL         E   +  +M+ +G   +V+TY TI++  C+A  L  A  +  
Sbjct: 224 AASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILA 283

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
            M+  G  P+  TFT L+ G   DG ++ AL+++  M  +   P  V+YN LI G C VG
Sbjct: 284 RMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVG 343

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           +++ A+ +   M      PN  +Y  LI+G+   G +  A  +W +M   G KP +V   
Sbjct: 344 DLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYT 403

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            ++  +C+    ++A   + KM+ E   P+++++NTLI        + +A  +  +M   
Sbjct: 404 NMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRH 463

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G VP+  TYN ++ G  R+G   D+  ++  M   G+     TY T+++G       +EA
Sbjct: 464 GCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREA 523

Query: 470 FRFHDEMLQRGFVPD 484
             F  +M+ +G  P+
Sbjct: 524 MVFVGKMIVQGIQPN 538



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 111/231 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+  CK    + AK  + +M  +   P+TVT+NTLI + C    +  A  + + M   G
Sbjct: 405 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 464

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN LI+GL ++G C  A  ++ EM   G+     TYNT++   C+     EA 
Sbjct: 465 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 524

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +M  +G+ P+  +FS +I  + + G++  A      M       + ++YTI++   
Sbjct: 525 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 584

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           C    +++A+    +ML +G   + VT+N ++ G+ R     E  D    +
Sbjct: 585 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHI 635


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 243/449 (54%), Gaps = 1/449 (0%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           ++  +   G L+EA  ++  M  +GL     T N +++     G  + A+ +  EM Q G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           +SPD  ++  ++V  C    + EAE+    M  RG   D  + + +I  F + G ++R +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            YF +M   GL P+ + +T +ING C+ G + +A ++ +EM+ +G   +V T+ T+++GL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 216 CRAKMLTEADDLFNEMLER-GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           C+     +A  LF +++   G  P+ +T+T +I+G+CK+  +N+A  L   M ++ + P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
             TY TLIDG CKVG   +A +L   M     SPN  +Y  +I+G C  G + EA+RL  
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           ++   G++   V+   ++  +CR  D +++  F +KM+  G  PD  SY TLI+ F R++
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            M ++  L  +  + GL+P   TY  ++ G+CR G    +  +  RM   G  PD  TY 
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            LI+G   ++ L +A   +D M+ +G  P
Sbjct: 580 ALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 250/483 (51%), Gaps = 1/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV    ++ K+  A   + EM+ +G+   T T N +++     G +E A  +   M  +G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   ++  ++   C  GR   A++ L+ M++ G   D AT   ++   C+K  ++   
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F +M   G+AP++++F+ LI    + G + +A     EM   G  P+   +T +I+G 
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 181 CRNGFVLEALKMRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G+  +A ++  +++   G   +V TY  ++NG C+   L  A+ L + M E+G+ P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTLI GHCK GN  +A  L D+M ++   P+I TYN +IDG CK G +++A +L  
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    +  + ++Y IL++ +C       +   + +M+  G  P + S  T+I  +CR  
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +++    + VS G+ P   +Y ++I G+ R  N   A  L  +M N G  PD ITY 
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +++G C++ ++ D+  +   M++KGL+P   T  TL   +  +++   A    D + +R
Sbjct: 580 ALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKR 639

Query: 480 GFV 482
            ++
Sbjct: 640 QWI 642



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 247/459 (53%), Gaps = 4/459 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV A C   ++  A+ +L  M ++G   D  T   +I+A+C++G++         M   G
Sbjct: 230 MVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMG 289

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V  + +LINGLCK+G   +A E+L+EM++ G  P+  T+ TL+   C+K    +A 
Sbjct: 290 LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAF 349

Query: 121 EIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +F ++ R  G  P++ +++ +I  + +  +L+RA M    M+  GLVP+   YT +I+G
Sbjct: 350 RLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDG 409

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G  + A ++ D M ++G   ++ TYN I++GLC+   L EA  L N++   G+  D
Sbjct: 410 HCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQAD 469

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T L+  HC+  + N++L  F+ M +    PDI +Y TLI  FC+  +M+++ +L+ 
Sbjct: 470 GVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFE 529

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           + +S  + P   +Y  +I GYC  G+ + A +L+  M   G  P  ++   +I G C+  
Sbjct: 530 EAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKES 589

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A      M+ +G+ P  ++  TL   + ++++   A  ++ ++E +  +    T N
Sbjct: 590 KLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIR---TVN 646

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
            ++   C +G++  + L   ++++K  N +R T    +N
Sbjct: 647 TLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMN 685



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 217/416 (52%), Gaps = 1/416 (0%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           ++    + G+   A  ++ EM   GL   T T N +L  +     +  AE +F EM +RG
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           V+PD VSF  ++      G++  A  +   M   G + DN   T+II+ +C+ G+V   +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
               +M+E G   +V+ +  ++NGLC+   + +A +L  EM+ RG  P+ YT TTLI G 
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 251 CKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           CK G   KA  LF  ++     KP++ TY  +I+G+CK  ++ +A  L + M  + + PN
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y  LI+G+C +G+   A+ L   M  +G  P + + N II G C+ G   +A   L+
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           K+   G+  D ++Y  L++   R+ + +++    +KM   G  PD+ +Y  +++ FCRQ 
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +M +SE +    +  GL P + TYT++I G+    N   A +    M   G  PD 
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDS 575



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 221/410 (53%), Gaps = 8/410 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++N LCK   I  A   L EM ++G  P+  T+ TLI+  C++G+ E+AF+L +  +   
Sbjct: 300 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSD 359

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G KP V TY ++ING CK+ + +RA+ +L  M + GL P+T TY TL+   C+  N   A
Sbjct: 360 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 419

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M + G +P+I +++ +I    + G LD A     ++   GL  D V YTI+++ 
Sbjct: 420 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 479

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR      +L   ++ML+ G   D+ +Y T+++  CR K + E++ LF E +  G+ P 
Sbjct: 480 HCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPT 539

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T++I G+C+ GN + A+ LF  M+     PD +TY  LI G CK  +++ A  L+ 
Sbjct: 540 KKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYD 599

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + +SP  ++   L   YC     + A  +   +  +    T+   NT+++  C  G
Sbjct: 600 AMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NTLVRKLCSEG 656

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
               A  F  K++ +  +P+ ++  TL+ GF+ +      + LVS++  +
Sbjct: 657 KLDMAALFFHKLLDK--EPN-VNRVTLL-GFMNKCYESNKYGLVSELSER 702


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 262/560 (46%), Gaps = 75/560 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLM------- 53
           +V+ALCK  K D A+  L EM  +G  PDTVT++TLI+  C+ G  E+AF+++       
Sbjct: 132 LVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 191

Query: 54  -------------------NSMS----------GKGLKPGVFTYNSLINGLCKKGRCDRA 84
                              NS+            KG  P V  +N +ING CK    D A
Sbjct: 192 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 251

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            ++L+ M++ G  P+  T+  L+   C+   + EA+++  +M   G +P++V++ST+I  
Sbjct: 252 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVING 311

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             + GQ+D A   F+ M+     P+ V + I+I+G C+   + EA ++   M E GC  D
Sbjct: 312 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 371

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGV-FPDFYTFTTLIHGHCKDGNMNKALNLF 263
           ++TYN++++GLC++  + EA  LF  + E GV   +  T++TL HG+   G M  A  +F
Sbjct: 372 IITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIF 431

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            ++  K   PD+ TY +LI  +CK     +  +L  +M S+   P   +   ++ G    
Sbjct: 432 SMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEG 491

Query: 324 GHVTEAFRLWYEMVGKG--------------------------------------IKPTL 345
            H   A +L+  M  +G                                        P+ 
Sbjct: 492 NHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSS 551

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            + + +++  C+ G    A + L KM   G      SYN L++G  R +  D+A  +   
Sbjct: 552 SAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEA 611

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M + G  P++ T NV+++  C   ++ D+  ++ RM + G  PD  T  TLI G+     
Sbjct: 612 MVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGR 671

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
              A +  +EM + G  P+D
Sbjct: 672 ADLARKLLEEMTEAGLEPND 691



 Score =  247 bits (631), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 243/488 (49%), Gaps = 4/488 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ LC+ ++   A         +   P+  TY  LI  +   G L+ A QL+  M   G 
Sbjct: 29  LDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGF 88

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +     + +L+ GLC  GR   A E    M +   +PD  TY  L+   C+     EA+ 
Sbjct: 89  EGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQG 147

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  EM  +G APD V+FSTLI    + G  ++A     ++   G+   +  +  II   C
Sbjct: 148 MLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLC 207

Query: 182 RNGFVLE-ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                +E A K+   ++ KG    V+ +N ++NG C+AK L  A  L   M+E+G  P+ 
Sbjct: 208 NKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNV 267

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TFT LI G CK   + +A  L + M      P++VTY+T+I+G CK G+++ A +L+  
Sbjct: 268 FTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQL 327

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R   PN +++ ILI+G C    + EA +L++ M   G  P +++ N++I G C+S  
Sbjct: 328 MERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ 387

Query: 361 ASKADEFLSKMVSEGVD-PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             +A +    +   GV   ++++Y+TL +G+     M  A  + S + ++G  PD+ TY 
Sbjct: 388 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYT 447

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++  +C+  R  +   ++  M  KG  P  +T + ++ G    N+ + A +  D M  R
Sbjct: 448 SLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 507

Query: 480 GFVPDDAF 487
           G   DDA 
Sbjct: 508 G-CTDDAL 514



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 256/512 (50%), Gaps = 41/512 (8%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A   L EM+  G   + V + TL+   C  G + EA +   +M+ K   P V TY +
Sbjct: 73  LDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTA 131

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++ LCK G+ D A+ +L EM+  G +PDT T++TL+   C+  +  +A  +  ++ +RG
Sbjct: 132 LVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 191

Query: 131 VAPDIVSFSTLIG-IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           +     +F T+I  + ++   ++ A      + + G  P  +++ ++ING+C+   +  A
Sbjct: 192 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 251

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            K+ + M+EKGCV +V T+  ++ GLC+A  + EA  L  +M+  G  P+  T++T+I+G
Sbjct: 252 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVING 311

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK G ++ A  LF +M +++  P++VT+N LIDG CK   +E+A +L+  M     +P+
Sbjct: 312 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 371

Query: 310 YISYGILINGYCSMGHVTEAF------------------------------------RLW 333
            I+Y  LI+G C    V EAF                                    R++
Sbjct: 372 IITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIF 431

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
             +V KG  P L +  ++I  YC++  A +  E + +M S+G  P   + + ++ G    
Sbjct: 432 SMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEG 491

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK---GLNPDR 450
            + ++A  L   M  +G   D + YN+++ G  R  +   +  +L ++I+K     NP  
Sbjct: 492 NHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSS 551

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           S    L+          +A +   +M +RGF 
Sbjct: 552 SAVDALVESLCQVGKTDDAKQLLHKMSERGFA 583



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 230/452 (50%), Gaps = 3/452 (0%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N  ++  CR    +EA  L  +   +   P  FTY  LI G    G  D A ++L+EM  
Sbjct: 26  NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            G   +   + TL+   C    + EA E F  M+ +  APD+++++ L+    + G+ D 
Sbjct: 86  SGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDE 144

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A    REM + G  PD V ++ +I+G C+ G   +A ++ ++++++G       + TI+ 
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQ 204

Query: 214 GLCRAKMLTE-ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            LC      E A  +   ++ +G  P    F  +I+G CK  +++ A  L ++M +K   
Sbjct: 205 RLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV 264

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P++ T+  LI G CK   + +A +L   M+    SPN ++Y  +ING C  G V +A+ L
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL 324

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           +  M  +   P +V+ N +I G C++    +A +   +M   G  PD I+YN+LI+G  +
Sbjct: 325 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384

Query: 393 EENMDKAFALVSKMENQGL-VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
              +D+AF L   +   G+   + +TY+ +  G+   GRM D+  I   +++KG +PD +
Sbjct: 385 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLA 444

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           TYT+LI  +   +   E     +EM  +GF P
Sbjct: 445 TYTSLILEYCKTSRAVEVVELVEEMASKGFPP 476



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 195/401 (48%), Gaps = 37/401 (9%)

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F + +R  V  ++ S +  + +  R  +   AL  FR   +   +P+   Y I+I G+ 
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
             G +  A+++ +EM   G   + V + T++ GLC A  + EA + F  M  +   PD  
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVM 127

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+T L+H  CK G  ++A  +   M  +   PD VT++TLIDG CK G  E+A ++  D+
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 302 ISRKI------------------------------------SPNYISYGILINGYCSMGH 325
           I R +                                    +P  + + ++ING+C    
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A++L   M+ KG  P + +   +I G C++    +A + L KMV  G  P+ ++Y+T
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +ING  ++  +D A+ L   ME +   P+V+T+N+++ G C+  R+ ++  +  RM E G
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             PD  TY +LI+G      + EAF+    + + G    +A
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANA 408



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 84/149 (56%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P +   + L+ + C+ G  ++A QL++ MS +G    V +YN L++GL +  R D A +V
Sbjct: 549 PSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQV 608

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            + M+  G +P+ +T N ++   C    + +A E+   MS+ G  PDI + +TLIG + +
Sbjct: 609 FEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCK 668

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTII 176
           +G+ D A     EM  AGL P++  + ++
Sbjct: 669 SGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 34/193 (17%)

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           E   L+++     +   + SCN  +   CR     +A       ++    P+  +Y  LI
Sbjct: 5   ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64

Query: 388 NGFVREENMDKAFALVSKMENQGL----------------------------------VP 413
            GF    ++D A  L+ +M++ G                                    P
Sbjct: 65  RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAP 124

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           DV+TY  ++   C+ G+  +++ +L  M+ +G  PD  T++TLI+G     + ++AFR  
Sbjct: 125 DVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVL 184

Query: 474 DEMLQRGFVPDDA 486
           ++++QRG    DA
Sbjct: 185 EDVIQRGMGNSDA 197


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/425 (33%), Positives = 236/425 (55%), Gaps = 5/425 (1%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN L+    R G ++E  QL   M  + +   ++T+N +IN  CK G    AK+ + +M+
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           Q GLSPD  T  + ++  CR +++  A  +F EM  R    + VS++ LI      G++D
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRID 275

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            A+  F  MK     P+   YT +I G CR   V +A+ + DEMLE+  V D++TYN+++
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            G CRA  L  A  L + M ERG+ PD  T+   I   CK   + +A  LFD +T++ + 
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            +++ Y+ LIDG+CKVG++++A  L+  M+S+  SPN  ++  LI+G CS G++ EA  L
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           + +MV  G+KPT+ + N +I    + GD   A + L KM+S G  P + +YN  I  +  
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              + +A  ++ +M+ +G+ PD  TY  ++  + + G  + +  +L  M +    P   T
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHT 574

Query: 453 YTTLI 457
           + +LI
Sbjct: 575 FLSLI 579



 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 158/533 (29%), Positives = 243/533 (45%), Gaps = 61/533 (11%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT--- 67
           +D       EM ++ V  D  T+N +IN YC+ GF++EA Q M  M   GL P  FT   
Sbjct: 173 VDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTS 232

Query: 68  ----------------------------YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD 99
                                       YN LI+GLC+ GR D A  +   M      P+
Sbjct: 233 FILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPN 292

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
             TY  L+   CRK N+ +A  +  EM  R + PD++++++LI    R G LD A     
Sbjct: 293 VYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLS 351

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
            MK  GLVPD   Y   I+  C++  V EA ++ D + E+G   +V+ Y+ +++G C+  
Sbjct: 352 LMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVG 411

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            + EA  LF +ML +   P+ YTF  LIHG C  GN+ +AL+LFD M +  +KP + T+N
Sbjct: 412 KVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFN 471

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
            LI    K G+ + A+K    M+S    P   +Y   I  YCS G V EA  +  +M  +
Sbjct: 472 ILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEE 531

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN----------- 388
           G+ P   +  ++IK Y + G    A + L  M     +P   ++ +LI            
Sbjct: 532 GVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEK 591

Query: 389 ------------GFVREENM------DKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
                       G V   NM      D    L  +ME  G  PD   Y  +++G C+   
Sbjct: 592 SGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVEN 651

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +  +  +L +M ++G++P    +  +I+         EA    ++M+  G  P
Sbjct: 652 LGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSP 704



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 215/393 (54%), Gaps = 5/393 (1%)

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           YN L+  L + G  D   ++  EML+  +S D  T+N ++   C+   + EA++  C+M 
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           + G++PD  + ++ I  + R+  +D A   F EM +     + V Y  +I+G C  G + 
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRID 275

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           EA+ +   M +  C  +V TY  ++ GLCR K + +A  L +EMLER + PD  T+ +LI
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G C+ G+++ A  L  +M ++ + PD  TY   ID  CK   +E+A +L+  +    +S
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            N I Y +LI+GYC +G V EA  L+ +M+ K   P   + N +I G C +G+  +A   
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +MV  G+ P   ++N LI   +++ + D A   + KM + G  P   TYN  +  +C 
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            G++ ++E ++ +M E+G+ PD  TYT+LI  +
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY 547



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 239/519 (46%), Gaps = 61/519 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPD------------------------------- 29
           M+N  CK   +  AK F+C+M Q G+ PD                               
Sbjct: 198 MINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN 257

Query: 30  TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
            V+YN LI+  C  G ++EA  L   M      P V+TY +LI GLC+K    +A  +LD
Sbjct: 258 EVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLD 316

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           EML+  L PD  TYN+L+   CR  ++  A  +   M  RG+ PD  ++   I    ++ 
Sbjct: 317 EMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSN 376

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           +++ A   F  +   G+  + ++Y+++I+GYC+ G V EA  + ++ML K C  +  T+N
Sbjct: 377 RVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFN 436

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            +++GLC A  L EA  LF++M++ G+ P  YTF  LI    K G+ + A      M   
Sbjct: 437 ALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSS 496

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
             KP   TYN  I+ +C  G++++A  +   M    + P+  +Y  LI  Y  +G    A
Sbjct: 497 GEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSA 556

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIK------------------GYCRSGDASKAD------ 365
           F +   M     +P+  +  ++IK                       GD   ++      
Sbjct: 557 FDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMME 616

Query: 366 -----EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                E   +M   G  PDS  Y  LI+G  + EN+  A  L+ +M+ +G+ P  + +N 
Sbjct: 617 FDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNA 676

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           +++  C+  +  ++  I+  MI  G +P      TLI G
Sbjct: 677 VISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICG 715



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 207/383 (54%), Gaps = 5/383 (1%)

Query: 103 YNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
           YN LL    R   + E  +++ EM    V+ DI +F+ +I ++ + G +  A  +  +M 
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
            AGL PD    T  I GYCR+  V  A ++ +EM  +    + V+YN +++GLC A  + 
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRID 275

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           EA  LF  M +   +P+ YT+T LI G C+  N++KA+ L D M ++++ PD++TYN+LI
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
            G C+ G ++ A +L + M  R + P+  +YG  I+  C    V EA RL+  +  +G+ 
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
             ++  + +I GYC+ G   +A     KM+S+   P++ ++N LI+G     N+ +A +L
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M   GL P V T+N+++    +QG   D+   L +M+  G  P   TY   I  + S
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514

Query: 463 QNNLKEAFRFHDEMLQRGFVPDD 485
              ++EA     +M + G  PDD
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDD 537



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 208/450 (46%), Gaps = 29/450 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+   +DSA   L  M+++G+ PD  TY   I+  C+   +EEA +L +S++ +G
Sbjct: 333 LIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V  Y+ LI+G CK G+ D A  + ++ML    SP+  T+N L+   C   N+ EA 
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL 452

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M + G+ P + +F+ LIG   + G  D A    ++M S+G  P    Y   I  Y
Sbjct: 453 SLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVY 512

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V EA  M  +M E+G   D  TY +++    +  +   A D+   M +    P  
Sbjct: 513 CSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSH 572

Query: 241 YTFTTLIH-----------------------GHCKDGNMNK------ALNLFDIMTQKSI 271
           +TF +LI                        G     NM K       + LF+ M +   
Sbjct: 573 HTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGC 632

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            PD   Y  LI G CKV  +  A KL   M    ISP+ + +  +I+  C +    EA  
Sbjct: 633 TPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAAN 692

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +  +M+  G  P L  C T+I G    G+  + +    K+   G + D I++  LI+G +
Sbjct: 693 IVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGML 752

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVI 421
           ++  +++   L  +ME  G      TY+++
Sbjct: 753 KQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 9/221 (4%)

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D +T+ S+K     YN L+    + G +++ N+L+ +M+   +S +  ++ ++IN YC M
Sbjct: 150 DDITKLSLK----CYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKM 205

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G V EA +   +M+  G+ P   +  + I GYCRS D   A     +M +     + +SY
Sbjct: 206 GFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSY 261

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N LI+G      +D+A +L  +M++    P+V TY  ++ G CR+  +H +  +L  M+E
Sbjct: 262 NQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLE 320

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + L PD  TY +LI G     +L  A+R    M +RG VPD
Sbjct: 321 RNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPD 361



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 79/165 (47%)

Query: 51  QLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES 110
           +L   M   G  P    Y  LI+G+CK      A ++LD+M + G+SP    +N ++   
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           C+ +   EA  I  +M   G +P +    TLI      G+ +R    F++++  G   D 
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
           + + I+I+G  + G V E  ++ +EM + GC     TY+ +   L
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 149/466 (31%), Positives = 235/466 (50%), Gaps = 32/466 (6%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ ++Y  L+ A CR G +++A   +  M+ + L P VFTYN +I+ LCK  R  RA E 
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            + M +    PD  TYNTLL   C+   +++A  +F  M   G+ P  V+++TLI +F +
Sbjct: 68  FETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 123

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
             Q + A    + M S    P    Y  IING C+N  V +A ++ +EM   GC  D VT
Sbjct: 124 MCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVT 183

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YNT+++GLC  + L EA DL   M+E    PD  TFT LI G C    + +A  LF  M 
Sbjct: 184 YNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMA 243

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP------NY-------ISYG 314
           ++   PD+VT+  L+   C               I RK+ P      NY       I Y 
Sbjct: 244 KQGCAPDLVTHTVLVSKLC---------------IRRKLRPALSVVRNYPACPEAVILYT 288

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            +            A RL  +M  +G+ P +V+     KG     +  +A     +M+ +
Sbjct: 289 PIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ 348

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G++PD ++YN L++GF +   +D A  +V  M+  GL P+++TYN ++   CR+G++   
Sbjct: 349 GIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAI 408

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             +L  M+ +G  PD +T++TL+ G      +  A+ F +  + +G
Sbjct: 409 GELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 215/425 (50%), Gaps = 6/425 (1%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP   +Y  L+  LC+ G+ D+A   + EM +  L PD  TYN ++   C+   +S A E
Sbjct: 7   KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
            F  M      PD+V+++TL+G   +NG++ +A   F  M+ AG+ P +V YT +I+ +C
Sbjct: 67  FFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           +      A  +   M  + C   V +Y +I+NGLC+ + + +A  LF EM   G  PD  
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+ TLIHG C    +++A +L  +M + S +PD +T+  LI+G C    +++A  L+  M
Sbjct: 183 TYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 242

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             +  +P+ +++ +L++  C    +  A  +            ++    I +   R    
Sbjct: 243 AKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGF 300

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A   L KM   GV P+ ++Y     G    +   +A+    +M  QG+ PD++ YNV+
Sbjct: 301 DRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVL 360

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           + GFC+  R+  +E ++  M + GL P+  TY TL+  H  +  ++        M+ RG 
Sbjct: 361 VDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGR 420

Query: 482 VPDDA 486
            PD A
Sbjct: 421 QPDVA 425



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 221/445 (49%), Gaps = 6/445 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC+  KID A   + EM ++ + PD  TYN +I+  C+   +  A +   +M    
Sbjct: 16  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP--- 72

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN+L+ GLCK GR  +A  +   M   G++P   TY TL+   C+      A 
Sbjct: 73  -EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 131

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M+ R  +P + S+ ++I    +N ++D+A   F EMK AG  PD V Y  +I+G 
Sbjct: 132 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 191

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    + EA  +   M+E     D +T+  ++ GLC    + EA  LF  M ++G  PD 
Sbjct: 192 CVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 251

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T T L+   C    +  AL++  +    +    ++ Y  +     +    ++A +L   
Sbjct: 252 VTHTVLVSKLCIRRKLRPALSV--VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQK 309

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R ++PN ++Y     G         A+R +  M+ +GI+P +V+ N ++ G+C++  
Sbjct: 310 MARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANR 369

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A++ +  M   G+ P+ ++YNTL+    R+  ++    L+  M ++G  PDV T++ 
Sbjct: 370 LDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWST 429

Query: 421 ILTGFCRQGRMHDSELILWRMIEKG 445
           ++ G  R G++  +   L   + +G
Sbjct: 430 LVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 142/275 (51%), Gaps = 4/275 (1%)

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           +  + C  + ++Y  ++  LCR   + +A     EM    + PD +T+  +I   CK   
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +++A+  F+ M +    PD+VTYNTL+ G CK G + +A  L+  M    I+P+ ++Y  
Sbjct: 61  ISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LI+ +C M     A+ L   M  +   PT+ S  +II G C++    +A +   +M   G
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             PD ++YNTLI+G   ++ + +A  L++ M      PD IT+  ++ G C   R+ ++ 
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           ++   M ++G  PD  T+T L++    +  L+ A 
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPAL 271



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           + S+   P+++SY  L+    R   +DKA + +++M  + LVPDV TYNV++   C+  R
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +  +      M E    PD  TY TL+ G      + +A      M   G  P D
Sbjct: 61  ISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSD 111


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 262/560 (46%), Gaps = 75/560 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLM------- 53
           +V+ALCK  K D A+  L EM  +G  PDTVT++TLI+  C+ G  E+AF+++       
Sbjct: 84  LVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 143

Query: 54  -------------------NSMS----------GKGLKPGVFTYNSLINGLCKKGRCDRA 84
                              NS+            KG  P V  +N +ING CK    D A
Sbjct: 144 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 203

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            ++L+ M++ G  P+  T+  L+   C+   + EA+++  +M   G +P++V++ST+I  
Sbjct: 204 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVING 263

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             + GQ+D A   F+ M+     P+ V + I+I+G C+   + EA ++   M E GC  D
Sbjct: 264 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 323

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGV-FPDFYTFTTLIHGHCKDGNMNKALNLF 263
           ++TYN++++GLC++  + EA  LF  + E GV   +  T++TL HG+   G M  A  +F
Sbjct: 324 IITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIF 383

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            ++  K   PD+ TY +LI  +CK     +  +L  +M S+   P   +   ++ G    
Sbjct: 384 SMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEG 443

Query: 324 GHVTEAFRLWYEMVGKG--------------------------------------IKPTL 345
            H   A +L+  M  +G                                        P+ 
Sbjct: 444 NHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSS 503

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            + + +++  C+ G    A + L KM   G      SYN L++G  R +  D+A  +   
Sbjct: 504 SAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEA 563

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M + G  P++ T NV+++  C   ++ D+  ++ RM + G  PD  T  TLI G+     
Sbjct: 564 MVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGR 623

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
              A +  +EM + G  P+D
Sbjct: 624 ADLARKLLEEMTEAGLEPND 643



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 234/462 (50%), Gaps = 4/462 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  TY  LI  +   G L+ A QL+  M   G +     + +L+ GLC  GR   A E 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              M +   +PD  TY  L+   C+     EA+ +  EM  RG APD V+FSTLI    +
Sbjct: 67  FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE-ALKMRDEMLEKGCVMDVV 206
            G  ++A     ++   G+   +  +  II   C     +E A K+   ++ KG    V+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            +N ++NG C+AK L  A  L   M+E+G  P+ +TFT LI G CK   + +A  L + M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
                 P++VTY+T+I+G CK G+++ A +L+  M  R   PN +++ ILI+G C    +
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD-PDSISYNT 385
            EA +L++ M   G  P +++ N++I G C+S    +A +    +   GV   ++++Y+T
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 365

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L +G+     M  A  + S + ++G  PD+ TY  ++  +C+  R  +   ++  M  KG
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG 425

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
             P  +T + ++ G    N+ + A +  D M  RG   DDA 
Sbjct: 426 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG-CTDDAL 466



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 257/512 (50%), Gaps = 41/512 (8%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A   L EM+  G   + V + TL+   C  G + EA +   +M+ K   P V TY +
Sbjct: 25  LDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTA 83

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++ LCK G+ D A+ +L EM+  G +PDT T++TL+   C+  +  +A  +  ++ +RG
Sbjct: 84  LVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 143

Query: 131 VAPDIVSFSTLIG-IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           +     +F T+I  + ++   ++ A      + + G  P  +++ ++ING+C+   +  A
Sbjct: 144 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 203

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            K+ + M+EKGCV +V T+  ++ GLC+A  + EA  L  +M+  G  P+  T++T+I+G
Sbjct: 204 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVING 263

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK G ++ A  LF +M +++  P++VT+N LIDG CK   +E+A +L+  M     +P+
Sbjct: 264 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 323

Query: 310 YISYGILINGYCSMGHVTEAF------------------------------------RLW 333
            I+Y  LI+G C    V EAF                                    R++
Sbjct: 324 IITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIF 383

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
             +V KG  P L +  ++I  YC++  A +  E + +M S+G  P   + + ++ G    
Sbjct: 384 SMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEG 443

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK---GLNPDR 450
            + ++A  L   M  +G   D + YN+++ G  R  + + +  +L ++I+K     NP  
Sbjct: 444 NHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSS 503

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           S    L+          +A +   +M +RGF 
Sbjct: 504 SAVDALVESLCQVGRTDDAKQLLHKMSERGFA 535



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 177/356 (49%), Gaps = 37/356 (10%)

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
           +P+   Y I+I G+   G +  A+++ +EM   G   + V + T++ GLC A  + EA +
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
            F  M  +   PD  T+T L+H  CK G  ++A  +   M  +   PD VT++TLIDG C
Sbjct: 66  HFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 287 KVGEMEKANKLWADMISRKI------------------------------------SPNY 310
           K G  E+A ++  D+I R +                                    +P  
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           + + ++ING+C    +  A++L   M+ KG  P + +   +I G C++    +A + L K
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           MV+ G  P+ ++Y+T+ING  ++  +D A+ L   ME +   P+V+T+N+++ G C+  R
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + ++  +  RM E G  PD  TY +LI+G      + EAF+    + + G    +A
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANA 360



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 158/285 (55%), Gaps = 2/285 (0%)

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C+ +  TY  ++ G   A  L  A  L  EM   G   +    TTL+ G C  G + +AL
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             F  M  K   PD++TY  L+   CK G+ ++A  +  +MI+R  +P+ +++  LI+G 
Sbjct: 65  EHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK-ADEFLSKMVSEGVDPD 379
           C  G   +AFR+  +++ +G+  +  +  TII+  C   ++ + A + L  ++++G  P 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            + +N +INGF + +++D A+ L+  M  +G VP+V T+ +++TG C+  R+ +++ +L 
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +M+  G +P+  TY+T+ING   Q  + +A+     M +R   P+
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPN 288



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 84/149 (56%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P +   + L+ + C+ G  ++A QL++ MS +G    V +YN L++GL +  R D A +V
Sbjct: 501 PSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQV 560

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            + M+  G +P+ +T N ++   C    + +A E+   MS+ G  PDI + +TLIG + +
Sbjct: 561 FEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCK 620

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTII 176
           +G+ D A     EM  AGL P++  + ++
Sbjct: 621 SGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 95/183 (51%), Gaps = 2/183 (1%)

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           ++R   PN  +YGILI G+ S G +  A +L  EM   G +   V   T++KG C +G  
Sbjct: 1   MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A E    M  +   PD ++Y  L++   +    D+A  ++ +M  +G  PD +T++ +
Sbjct: 61  VEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ-NNLKEAFRFHDEMLQRG 480
           + G C+ G    +  +L  +I++G+    + + T+I    ++ N+++ A +    ++ +G
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179

Query: 481 FVP 483
           F P
Sbjct: 180 FTP 182


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 239/447 (53%), Gaps = 12/447 (2%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           +N ++ +  +         L   M  +G+ P   T+N LIN  C+ G    A  VL ++L
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
           +MG  PD  T NT +   C K  + +A     ++   G   D VS+ TLI    + G+  
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            AL   R +    +  + V+Y  +I+G  ++  V +A  +  EM+ K    DVVTY+ ++
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            G      L +A DLFN+M+   + PD YTF  L+ G CK+G + KA N+ D+M  + IK
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P++ T+NTL+DGFCK  +M++   ++A M+ + I PN ++Y  L++GYC +  V +A ++
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 370

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           +  M  +G+   + S N +I G+C+     KA +   +M  + + PD ++YN+LI+G  +
Sbjct: 371 FNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCK 430

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              +  AF LV++M ++G  P++ITYN IL              +L ++ ++G+ P+  T
Sbjct: 431 SGKISYAFQLVNEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHT 478

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQR 479
            T LI G      L+ A +  +++L +
Sbjct: 479 DTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 246/425 (57%), Gaps = 12/425 (2%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME +G+ P+ VT+N LIN +C+ G +  AF ++  +   G +P + T N+ I G C KG
Sbjct: 93  QMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKG 152

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +  +A    D+++ +G   D  +Y TL+   C+      A ++   +  + V  + V ++
Sbjct: 153 QIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYN 212

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I   S++  ++ A   + EM +  + PD V Y+ +I G+   G + +A+ + ++M+ +
Sbjct: 213 TVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILE 272

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
               DV T+N +++G C+   L +A ++ + M+ + + P+  TF TL+ G CKD  M + 
Sbjct: 273 NIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEG 332

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +F +M ++ IKP++VTY +L+DG+C V ++ KA K++  M  R ++ N  SY I+ING
Sbjct: 333 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMING 392

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C +  V +A +L+ EM  K I P +V+ N++I G C+SG  S A + +++M   G  P+
Sbjct: 393 FCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPN 452

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+YN+++N            AL++K+++QG+ P++ T  +++ G C+ G++  +  +  
Sbjct: 453 IITYNSILN------------ALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFE 500

Query: 440 RMIEK 444
            ++ K
Sbjct: 501 DLLVK 505



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 235/418 (56%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           ++ A  L NS+  +      F +N ++  L K         +  +M   G++P+  T+N 
Sbjct: 49  VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNI 108

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   C+   +  A  +  ++ + G  PDI++ +T I  F   GQ+ +AL +  ++ + G
Sbjct: 109 LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALG 168

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
              D V Y  +ING C+ G    AL++   +  K   ++ V YNT+++G+ + K + +A 
Sbjct: 169 FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAF 228

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           DL++EM+ + + PD  T++ LI G    G +  A++LF+ M  ++IKPD+ T+N L+DGF
Sbjct: 229 DLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 288

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK G ++KA  +   M+ + I PN  ++  L++G+C    + E   ++  M+ +GIKP +
Sbjct: 289 CKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNV 348

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+  +++ GYC     +KA +  + M   GV  +  SYN +INGF + + +DKA  L  +
Sbjct: 349 VTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIE 408

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           M ++ ++PDV+TYN ++ G C+ G++  +  ++  M ++G  P+  TY +++N  +++
Sbjct: 409 MHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTK 466



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 223/399 (55%), Gaps = 12/399 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+   I  A   L ++ + G  PD +T NT I  +C +G + +A    + +   G
Sbjct: 109 LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALG 168

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                 +Y +LINGLCK G    A ++L  +    +  +   YNT++    + +++++A 
Sbjct: 169 FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAF 228

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM  + ++PD+V++S LI  F   G+L  A+  F +M    + PD   + I+++G+
Sbjct: 229 DLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 288

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A  + D M+ +    +V T+NT+++G C+ + + E   +F  M+++G+ P+ 
Sbjct: 289 CKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNV 348

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+ G+C    +NKA  +F+ M+Q+ +  ++ +YN +I+GFCK+ +++KA KL+ +
Sbjct: 349 VTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIE 408

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I P+ ++Y  LI+G C  G ++ AF+L  EM  +G  P +++ N+I+        
Sbjct: 409 MHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSIL-------- 460

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
               +  L+K+  +G+ P+  +   LI G  +   ++ A
Sbjct: 461 ----NALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAA 495



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 128/254 (50%), Gaps = 5/254 (1%)

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           +L++   P + + +T  H +  DG    A++LF+ +  ++       +N ++    K   
Sbjct: 29  LLQKNFIP-YSSISTTFHSNDVDG----AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKH 83

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
                 L   M    I+PN++++ ILIN +C +G +  AF +  +++  G +P +++ NT
Sbjct: 84  YHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNT 143

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
            IKG+C  G   +A  F  K+V+ G   D +SY TLING  +      A  L+ +++ + 
Sbjct: 144 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKL 203

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           +  + + YN ++ G  +   ++D+  +   M+ K ++PD  TY+ LI G      LK+A 
Sbjct: 204 VQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAI 263

Query: 471 RFHDEMLQRGFVPD 484
              ++M+     PD
Sbjct: 264 DLFNKMILENIKPD 277


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 252/464 (54%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           + G  P+ VT +TL+   C EG + +A +L + M+  G +  +  Y  LIN L K  +  
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           RA E+   ML    S +  TY  ++   C+     +  ++F EM   G+ P+++ +S+LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               R G+L  A+  F EM S G+  + + Y  +I+  CR G   EA +   +M+ +G +
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DVVT+ T+++ L +   + EA  +F  M+++G  P+  T+ +L++G C    M+ A+ L
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F++M ++ IK D+++YNTLI+G+C  G+ E+A  L+  M   +++P+  +Y IL+     
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G +  A  L+  M   G  P+L +   ++ G C++G   +A +    + S    P    
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI 361

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y+ LI G  +    + A  +  ++   GLVP+++TYN+++ G C++G++ ++E +  +M 
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQME 421

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           E G   D  ++  +I G + +N +++A  F   M ++ F P+D+
Sbjct: 422 ESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDS 465



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 249/480 (51%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  +C + K+  A     +M + G   D + Y  LINA  +      A +L   M  + 
Sbjct: 15  LVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEI 74

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                FTY  +I+ LCK G   +  ++  EM+ MG+ P+   Y++L+   CR   + EA 
Sbjct: 75  CSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAV 134

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G+  +++++++LI    R G    A   F +M   G++PD V +T +I+  
Sbjct: 135 NLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHL 194

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V EA K+ + M+++G   ++VTYN++LNGLC    +  A  LF  M+ERG+  D 
Sbjct: 195 SKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDV 254

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI+G+C  G   +A+ LF  M  + + P I TY  L+    + G +  A +L+ +
Sbjct: 255 ISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNN 314

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     SP+  +Y +L++G C  G + EA  ++  +     KP++   + +I G  ++  
Sbjct: 315 MQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARR 374

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A E   ++ + G+ P+ ++YN +ING  +E  + +A  L  +ME  G   D I++N 
Sbjct: 375 WESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNF 434

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE-AFRFHDEMLQR 479
           I+ GF ++ ++  +   L RM EK  +P+ S    L+N + +     E    F  E++Q+
Sbjct: 435 IIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSELPNNFLHELVQK 494



 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 205/393 (52%)

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           ++ G  P+  T +TL+   C +  + +A E+F +M+R G   DI+ +  LI    +  Q 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
            RA+   R M S     +   Y ++I+  C++G  ++ LKM  EM+  G   +V+ Y+++
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           +NGLCR   L EA +LF+EM+ +G+  +  T+ +LIH  C+ G   +A   F  M  + I
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            PD+VT+ TLID   K G++++A K++  MI +  +PN ++Y  L+NG C    +  A R
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L+  MV +GIK  ++S NT+I GYC SG   +A     KM  E + P   +Y  L+    
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   +  A  L + M+  G  P + TY V+L G C+ G + ++  +   +      P   
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIR 360

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            Y+ LI G       + A    DE+   G VP+
Sbjct: 361 IYSILIGGMFQARRWESAMEIFDEIPTVGLVPN 393


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/472 (33%), Positives = 243/472 (51%), Gaps = 10/472 (2%)

Query: 12  DSAKMFLCEMEQKGVYPDTV-TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +SA +F      +  +  TV TYN    A  R G  EEA++L      + L P   TY  
Sbjct: 71  ESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGI 130

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI GLC  G+   A  + +EM+  GL P   T   LL   C+  N+  A   F +MS   
Sbjct: 131 LIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS-- 188

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             P   +++ LI    R  ++D A  YF EMK    +P+N  YT++ING  + G V EA 
Sbjct: 189 -IPCAATWTILIDGLFRAIRVDEACYYFEEMKHTA-IPNNWTYTVVINGLVKAGKVAEAE 246

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++  EM     V  +  Y +++ G C+A  + +A  L  +M  +G   D  T+ TLIHGH
Sbjct: 247 RVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGH 302

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPN 309
           C+   +++A  L + M      PDI TY+ LI G C+   + +A  L   + +    +PN
Sbjct: 303 CRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPN 362

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            +SY  LI+G+     V +A++L+ EMV  G  P +V+ +T+I+G C +G AS+A  +L 
Sbjct: 363 VVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLE 422

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +MV + + P    Y+++I+G  R   +D A  +   M   G  P++  YN ++ G C+ G
Sbjct: 423 EMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTG 482

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           R+ D++L +  M E+G +PD  TY TLI G    +   EA   +   L++G 
Sbjct: 483 RLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGI 534



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 238/486 (48%), Gaps = 14/486 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   K+  A     EM  +G+ P  +T   L+NA C+ G LE A +    MS   
Sbjct: 131 LIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS-- 188

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+  LI+GL +  R D A    +EM    + P+  TY  ++    +   ++EAE
Sbjct: 189 -IPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAE 246

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM      P + +++++IG   + G + +A     +MK  G   DN+ Y  +I+G+
Sbjct: 247 RVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGH 302

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-ERGVFPD 239
           CR   +  A ++ +EM     V D+ TY+ ++ GLCRAK L+EA DL   +  E    P+
Sbjct: 303 CRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPN 362

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++ TLI G  K   +N A  LF  M      PD+VTY+TLI G C  G   +A+    
Sbjct: 363 VVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLE 422

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+ +KI P    Y  +I+G C  G +  A  ++  MV  G +P L   N++I G C++G
Sbjct: 423 EMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTG 482

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A   + +M   G  PD ++Y TLI G  R    D+A  L  +   QG+     + N
Sbjct: 483 RLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCN 542

Query: 420 VILTGF-CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           V++    C    +  ++ +L  ++  G +P    Y T+I     +NNL EA +  ++M+ 
Sbjct: 543 VVIASLRC----LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIG 598

Query: 479 RGFVPD 484
            G  PD
Sbjct: 599 AGIKPD 604



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 246/489 (50%), Gaps = 7/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK   +  A   L +M++KG   D +TYNTLI+ +CR   ++ A++L+  M    
Sbjct: 263 VIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSND 322

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSEA 119
             P +FTY+ LI GLC+  R   A+++L  +  +   +P+  +YNTL+    +   +++A
Sbjct: 323 FVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDA 382

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++F EM   G  PD+V++STLI      G+   A  Y  EM    ++P   +Y+ +I+G
Sbjct: 383 YQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISG 442

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR G +  A  + D M+  GC  ++  YN+++ GLC+   L +A     EM ERG  PD
Sbjct: 443 LCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPD 502

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF-CKVGEMEKANKLW 298
             T+ TLI G C+    ++A +L+    ++ I+    + N +I    C    +E+A ++ 
Sbjct: 503 GVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRC----LEQAQRVL 558

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             +++   SP    Y  +I   C   ++ EA +L  +M+G GIKP   + + ++   CR 
Sbjct: 559 RVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQ 618

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM-ENQGLVPDVIT 417
             A  A  FL +MV  G  P   +Y+TL+N   +     +A  ++ ++  +    PD + 
Sbjct: 619 DKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELW 678

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           Y  ++  +  Q ++ ++  +L  +  K        Y TL+ G     NL+  +    EM 
Sbjct: 679 YVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMK 738

Query: 478 QRGFVPDDA 486
           +  FV ++A
Sbjct: 739 RNEFVVNEA 747



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 248/556 (44%), Gaps = 74/556 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K+  A+  L EM      P    Y ++I  +C+ G + +A+ L+  M  KG
Sbjct: 232 VINGLVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKG 287

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    TYN+LI+G C+    DRA E+L+EM      PD  TY+ L+   CR + +SEA 
Sbjct: 288 YQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEAR 347

Query: 121 EIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           ++   +       P++VS++TLI  FS+  +++ A   F EM +AG  PD V Y+ +I G
Sbjct: 348 DLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRG 407

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C  G   EA    +EM+ K  +  V  Y+++++GLCRA  L  A  +F+ M+  G  P+
Sbjct: 408 LCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPN 467

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              + +LI+G CK G +  A      MT++   PD VTY TLI G C+    ++A  L+ 
Sbjct: 468 LAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYV 527

Query: 300 DMISRKI--------------------------------SPNYISYGILINGYCSMGHVT 327
             + + I                                SP    Y  +I   C   ++ 
Sbjct: 528 RSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLA 587

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA +L  +M+G GIKP   + + ++   CR   A  A  FL +MV  G  P   +Y+TL+
Sbjct: 588 EARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLL 647

Query: 388 NGFVR------------------------------------EENMDKAFALVSKMENQGL 411
           N   +                                    ++ +++A  ++ +++++  
Sbjct: 648 NALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWG 707

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           +  ++ YN +L G  R   +     +L  M       + +T+  LI G         A R
Sbjct: 708 IQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVR 767

Query: 472 FHDEMLQRGFVPDDAF 487
              EM ++   P  A 
Sbjct: 768 VLSEM-KKVLTPSAAI 782



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 213/444 (47%), Gaps = 7/444 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  +++ A     EM   G +PD VTY+TLI   C  G   EA   +  M GK 
Sbjct: 369 LIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKK 428

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V  Y+S+I+GLC+ G  D A  V D M+  G  P+ A YN+L+   C+   + +A+
Sbjct: 429 ILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAK 488

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIING 179
               EM+ RG +PD V++ TLI    R  + D A  +Y R ++    + +     +I + 
Sbjct: 489 LRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL 548

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C    + +A ++   +L  G       Y T++  LC+   L EA  L  +M+  G+ PD
Sbjct: 549 RC----LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPD 604

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T   L+   C+      A+   + M +   KP + TY+TL++   K G+  +A+ +  
Sbjct: 605 GSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLR 664

Query: 300 DMISRKIS-PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +IS     P+ + Y  LI  Y +   V EA  +  E+  K    ++V+ NT++KG  R+
Sbjct: 665 RLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRT 724

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
            +     E L +M       +  ++N LI GF R    D+A  ++S+M+ + L P     
Sbjct: 725 RNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMK-KVLTPSAAII 783

Query: 419 NVILTGFCRQGRMHDSELILWRMI 442
             ++    R  R  +S+ ++ R +
Sbjct: 784 KFLVDELARAEREQESKDLVKRPV 807



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
           T++  +  + TYN   +   + G+ E+A +L+ +   +++ P+ I+YGILI G C+ G +
Sbjct: 82  TRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKL 141

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  L+ EMV +G++P +++C  ++   C+SG+   A  +  KM S    P + ++  L
Sbjct: 142 KLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS---IPCAATWTIL 198

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G  R   +D+A     +M++   +P+  TY V++ G  + G++ ++E +L  M     
Sbjct: 199 IDGLFRAIRVDEACYYFEEMKHTA-IPNNWTYTVVINGLVKAGKVAEAERVLQEMPV--- 254

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            P  + YT++I GH    ++ +A+   ++M ++G+  D+
Sbjct: 255 -PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDN 292


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 233/456 (51%), Gaps = 3/456 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK    + +  FL  +  KG  PD V    LI+       +++A Q+M+ +   G  P +
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
             YN++I G C+  R D A +VLD M   G SPD  TYN L+   C +  +  A E   +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           + +    P +V+++ LI      G +D A+    EM    L PD   Y  II G CR G+
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V  A ++   +  KG   DV+TYN +L GL          +L ++M+ RG   +  T++ 
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI   C+DG + + + L   M +K +KPD   Y+ LI   CK G ++ A ++   MIS  
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ ++Y  ++   C      EA  ++ ++   G  P   S N++      +G   +A 
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRAL 426

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS--KMENQGLVPDVITYNVILT 423
             + +M+ +GVDPD I+YN+LI+   R+  +D+A  L+   +ME+    P V++YN++L 
Sbjct: 427 GMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLL 486

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           G C+  R+ D+  +L  M++KG  P+ +TYT LI G
Sbjct: 487 GLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEG 522



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 223/436 (51%), Gaps = 3/436 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L     ID A   +  +E  G +PD + YN +I  +CR   ++ A+Q+++ M  KG
Sbjct: 98  LIHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKG 156

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN LI  LC +G  D A E  +++L+    P   TY  L+  +  +  + EA 
Sbjct: 157 FSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAM 216

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM    + PD+ +++++I    R G +DRA      + S G  PD + Y I++ G 
Sbjct: 217 KLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGL 276

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G      ++  +M+ +GC  +VVTY+ +++ +CR   + E   L  +M ++G+ PD 
Sbjct: 277 LNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDG 336

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y +  LI   CK+G ++ A+ + D+M      PDIV YNT++   CK    ++A  ++  
Sbjct: 337 YCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEK 396

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +     SPN  SY  + +   S GH   A  +  EM+ KG+ P  ++ N++I   CR G 
Sbjct: 397 LGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGM 456

Query: 361 ASKADEFLSKMVSEGVD--PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
             +A E L  M  E  +  P  +SYN ++ G  +   +  A  +++ M ++G  P+  TY
Sbjct: 457 VDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTY 516

Query: 419 NVILTGFCRQGRMHDS 434
             ++ G    G ++D+
Sbjct: 517 TFLIEGIGFGGCLNDA 532



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 207/410 (50%), Gaps = 37/410 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+ ++IDSA   L  M+ KG  PD VTYN LI + C  G L+ A +  N +  + 
Sbjct: 132 IITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKEN 191

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY  LI     +G  D A ++LDEML++ L PD  TYN+++   CR+  +  A 
Sbjct: 192 CKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAF 251

Query: 121 EIFCEMSRRGVAPDI-----------------------------------VSFSTLIGIF 145
           +I   +S +G APD+                                   V++S LI   
Sbjct: 252 QIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSV 311

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R+G+++  +   ++MK  GL PD   Y  +I   C+ G V  A+++ D M+  GCV D+
Sbjct: 312 CRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDI 371

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V YNTIL  LC+ K   EA  +F ++ E G  P+  ++ ++       G+  +AL +   
Sbjct: 372 VNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILE 431

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI--SRKISPNYISYGILINGYCSM 323
           M  K + PD +TYN+LI   C+ G +++A +L  DM   S +  P+ +SY I++ G C +
Sbjct: 432 MLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKV 491

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             V++A  +   MV KG +P   +   +I+G    G  + A +  + +V+
Sbjct: 492 SRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVN 541



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 201/379 (53%), Gaps = 3/379 (0%)

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAG 165
           L  SC+  N +E+      +  +G  PD+V  + LI G+F+ +  +D+A+     +++ G
Sbjct: 64  LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFT-SKTIDKAIQVMHILENHG 122

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             PD + Y  II G+CR   +  A ++ D M  KG   D+VTYN ++  LC   ML  A 
Sbjct: 123 H-PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSAL 181

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +  N++L+    P   T+T LI      G +++A+ L D M + +++PD+ TYN++I G 
Sbjct: 182 EFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGM 241

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C+ G +++A ++ + + S+  +P+ I+Y IL+ G  + G     + L  +MV +G +  +
Sbjct: 242 CREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANV 301

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ + +I   CR G   +    L  M  +G+ PD   Y+ LI    +E  +D A  ++  
Sbjct: 302 VTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDV 361

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M + G VPD++ YN IL   C+Q R  ++  I  ++ E G +P+ S+Y ++ +   S  +
Sbjct: 362 MISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGH 421

Query: 466 LKEAFRFHDEMLQRGFVPD 484
              A     EML +G  PD
Sbjct: 422 KVRALGMILEMLDKGVDPD 440



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 156/297 (52%), Gaps = 3/297 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    K ++    + +M  +G   + VTY+ LI++ CR+G +EE   L+  M  KG
Sbjct: 272 LLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKG 331

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP  + Y+ LI  LCK+GR D A EVLD M+  G  PD   YNT+L   C+++   EA 
Sbjct: 332 LKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEAL 391

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF ++   G +P+  S++++       G   RAL    EM   G+ PD + Y  +I+  
Sbjct: 392 SIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCL 451

Query: 181 CRNGFVLEALKMRD--EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           CR+G V EA+++    EM    C   VV+YN +L GLC+   +++A ++   M+++G  P
Sbjct: 452 CRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRP 511

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           +  T+T LI G    G +N A +L   +       +  ++  L   FCK+    + N
Sbjct: 512 NETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISE-HSFERLYKTFCKLDVYRQLN 567


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/486 (31%), Positives = 252/486 (51%), Gaps = 12/486 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++   K   I  A +   EM  K + PD +T+NTL+  + R G  E+  +L+  +S  G
Sbjct: 368 MISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSG 427

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L       +  + GLC  GR D A ++L+ +L+ G+ P    +N+++           A 
Sbjct: 428 LLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAF 487

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  M + G+ P   + S+L+    R G LD A +   +M   G    N+ +T++++GY
Sbjct: 488 YAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGY 547

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G V  A  + +EM  +G   D V +   +NGLC + ++T+A D+F++ML +G  P+ 
Sbjct: 548 FRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNN 607

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + +LI G CK G +N+AL L   M ++ + PDI T N +I G CK G M+ A + + D
Sbjct: 608 FVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMD 667

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +SP+ ++Y  LI+GYC    V  A  L  +M   G +P L + N  I GYC    
Sbjct: 668 MCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRK 727

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A   L +++S G+ P++++YNT+IN  V    +D A  L +K+     VP+ +T NV
Sbjct: 728 INRAVMILEELISVGIVPNTVTYNTMINA-VCNVILDHAMILTAKLLKMAFVPNTVTVNV 786

Query: 421 ILTGFCRQGRMHDSELILW--RMIEKGLNPDRST-------YTTLINGHVSQNNLKEAFR 471
           +L+ FC+QG    +  I W  ++ E  L+ D +T       Y  L  G V  N   E   
Sbjct: 787 LLSQFCKQGMPEKA--IFWGQKLSEIHLDFDETTHKLMNRAYRALEEGGVVINTSYEKSV 844

Query: 472 FHDEML 477
           F D ++
Sbjct: 845 FMDFLM 850



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 249/458 (54%), Gaps = 2/458 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD  +YN +INA C +G    A  L+N M   G KP + T+ ++I+  CK+G  + A++ 
Sbjct: 290 PDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKY 349

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            DE+  MGLS +T  YN ++    +  ++S+A  +F EM  + + PD ++F+TL+    R
Sbjct: 350 FDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYR 409

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+ +      R++  +GL+ D+ L  + + G C  G   EA+K+ + +LEKG    VV 
Sbjct: 410 YGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVA 469

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA-LNLFDIM 266
           +N+I+     A +   A   +  M++ G+ P   T ++L+    + G++++A + L+D M
Sbjct: 470 FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYD-M 528

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             K      + +  L+DG+ ++G +  A  LW +M  R + P+ +++   ING C  G +
Sbjct: 529 IDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLM 588

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           T+A+ ++ +M+ KG  P     N++I G+C+ G  ++A + + +M   G+ PD  + N +
Sbjct: 589 TDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMI 648

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G  ++  M  A      M   GL PD++TYN ++ G+C+   +  ++ ++ +M + G 
Sbjct: 649 ICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGW 708

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            PD +TY   I+G+ +   +  A    +E++  G VP+
Sbjct: 709 EPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPN 746



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 245/465 (52%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           ++ +KG  P+  T+N LI  +CR+G+      L++ M     +P V++YN +IN  C KG
Sbjct: 247 DVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKG 306

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  +L+ M++ G  P  AT+ T++   C++ N+  A + F E+   G++ + + ++
Sbjct: 307 QSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYN 366

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            +I  + +   + +A + F EM++  +VPD + +  ++ G+ R G   +  ++  ++   
Sbjct: 367 IMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVS 426

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G + D    +  + GLC A    EA  L   +LE+G+ P    F ++I  +   G   +A
Sbjct: 427 GLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERA 486

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
              + IM +  + P   T ++L+    + G +++A     DMI +      +++ +L++G
Sbjct: 487 FYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDG 546

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y  +G V  A  LW EM G+G+ P  V+    I G C SG  + A +  S M+ +G  P+
Sbjct: 547 YFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPN 606

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +  YN+LI GF +   +++A  LV +M  +GL+PD+ T N+I+ G C+QGRM  +     
Sbjct: 607 NFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFM 666

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   GL+PD  TY TLI+G+    ++  A     +M   G+ PD
Sbjct: 667 DMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPD 711



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 246/470 (52%), Gaps = 3/470 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A CK+  ++ A+ +  E+E  G+  +T+ YN +I+ Y +   + +A  L   M  K 
Sbjct: 333 IIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKD 392

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+N+L+ G  + G+ +    +L ++   GL  D++  +  +   C      EA 
Sbjct: 393 IVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAM 452

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   +  +G+ P +V+F+++I  +   G  +RA   +  M   GL P +   + ++   
Sbjct: 453 KLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISL 512

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G + EA     +M++KG  +  + +  +L+G  R   +  A+ L+NEM  RGVFPD 
Sbjct: 513 VRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDA 572

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F   I+G C  G M  A ++F  M +K   P+   YN+LI GFCKVG++ +A KL  +
Sbjct: 573 VAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVRE 632

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + P+  +  ++I G C  G +  A   + +M   G+ P +V+ NT+I GYC++ D
Sbjct: 633 MNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFD 692

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              AD+ + KM   G +PD  +YN  I+G+     +++A  ++ ++ + G+VP+ +TYN 
Sbjct: 693 VGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNT 752

Query: 421 ILTGFCRQGRMHDSELIL-WRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++   C    + D  +IL  ++++    P+  T   L++    Q   ++A
Sbjct: 753 MINAVCNV--ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKA 800



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 234/484 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K      A   L +M + GV P+    + L     R G     ++L   +  KG
Sbjct: 193 LMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKG 252

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FT+N LI   C+KG     + +L  M +    PD  +YN ++  +C K   S A 
Sbjct: 253 PCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYAL 312

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G  P I +F T+I  F + G ++ A  YF E++  GL  + ++Y I+I+GY
Sbjct: 313 HLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGY 372

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + +A  + +EM  K  V D +T+NT++ G  R     + + L  ++   G+  D 
Sbjct: 373 VKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDS 432

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                 + G C  G  ++A+ L + + +K I P +V +N++I  +   G  E+A   +  
Sbjct: 433 SLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGI 492

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   ++P+  +   L+      G + EA+   Y+M+ KG   T ++   ++ GY R G 
Sbjct: 493 MVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 552

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A+   ++M   GV PD++++   ING      M  A+ + S M  +G VP+   YN 
Sbjct: 553 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 612

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+ G+++++  ++  M ++GL PD  T   +I G   Q  +K A     +M + G
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672

Query: 481 FVPD 484
             PD
Sbjct: 673 LSPD 676



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 215/419 (51%), Gaps = 4/419 (0%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           ++L+    K      A E+L +M ++G++P+ +  + L     R  +     ++F ++ R
Sbjct: 191 DTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 250

Query: 129 RGVAPDIVSFSTLIGIFSRNG--QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           +G  P+  +F+ LI  F R G  ++  AL++   M      PD   Y I+IN  C  G  
Sbjct: 251 KGPCPNNFTFNLLILEFCRKGWTRIGEALLHV--MGKFRCEPDVYSYNIVINANCLKGQS 308

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL + + M+E GC   + T+ TI++  C+   +  A   F+E+ + G+  +   +  +
Sbjct: 309 SYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIM 368

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I G+ K  ++++A  LF+ M  K I PD +T+NTL+ G  + G+ E  N+L  D+    +
Sbjct: 369 ISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGL 428

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
             +     + + G C  G   EA +L   ++ KGI P++V+ N+II  Y  +G   +A  
Sbjct: 429 LHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFY 488

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               MV  G+ P S + ++L+   VR+ ++D+A+  +  M ++G     + + V+L G+ 
Sbjct: 489 AYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYF 548

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           R G ++ +E +   M  +G+ PD   +   ING      + +A+    +ML++GFVP++
Sbjct: 549 RIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNN 607



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 148/311 (47%)

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           ++  + ++    EAL++  +M E G   +    + +   L RA        LF +++ +G
Sbjct: 193 LMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKG 252

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+ +TF  LI   C+ G       L  +M +   +PD+ +YN +I+  C  G+   A 
Sbjct: 253 PCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYAL 312

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            L   MI     P+  ++  +I+ +C  G+V  A + + E+   G+    +  N +I GY
Sbjct: 313 HLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGY 372

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            ++ D S+A+    +M ++ + PD I++NTL+ G  R    +    L+  +   GL+ D 
Sbjct: 373 VKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDS 432

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
              +V + G C  GR  ++  +L  ++EKG+ P    + ++I  + +    + AF  +  
Sbjct: 433 SLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGI 492

Query: 476 MLQRGFVPDDA 486
           M++ G  P  +
Sbjct: 493 MVKFGLTPSSS 503



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 113/249 (45%)

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           DF    TL+    K     +AL +   M +  + P+    + L     + G+     KL+
Sbjct: 186 DFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLF 245

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            D++ +   PN  ++ +LI  +C  G       L + M     +P + S N +I   C  
Sbjct: 246 GDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLK 305

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G +S A   L+ M+  G  P   ++ T+I+ F +E N++ A     ++E+ GL  + I Y
Sbjct: 306 GQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVY 365

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N++++G+ +   +  + L+   M  K + PD  T+ TL+ GH      ++  R   ++  
Sbjct: 366 NIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSV 425

Query: 479 RGFVPDDAF 487
            G + D + 
Sbjct: 426 SGLLHDSSL 434


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/453 (32%), Positives = 231/453 (50%), Gaps = 12/453 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   + + A+  + EM +   +P+ VT+ T I ++C+ G L+ A QL+  M   G
Sbjct: 216 VLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYG 275

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  Y++L+NG  ++GR D A  +L+ ML     P+T  YN  L   C  E   +  
Sbjct: 276 CTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVG 332

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R+   P+  +FS L     ++G +D A+    +M+  G  PD V+Y  +IN +
Sbjct: 333 ELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYF 392

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V +AL + D ML   C  D +++N  L  LCR +   + ++L  +ML        
Sbjct: 393 SEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIE 449

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI   C+ G +N A+ +F+ M +    PDIVTY++LI+GF + G +E A +L+  
Sbjct: 450 MTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQS 509

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +   P+  SY  ++ G C      +A  L   M  K   P  ++ N +I   C+ G 
Sbjct: 510 MPCK---PDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGF 566

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           A +A E   +M   G  PD  +YN LINGF  +  +D A  L+S M  +   PD I+YN 
Sbjct: 567 ADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK---PDAISYNS 623

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            L G CR  R  ++E I+  M+ K   P+  T+
Sbjct: 624 TLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 244/484 (50%), Gaps = 14/484 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A+  L  +++ G   D V++NTL+  YCR+G L +A +++ +    G
Sbjct: 116 LIKKLCAHRRLADAERVLDALKESG-SADAVSHNTLVAGYCRDGRLADAERVLEAAKVSG 174

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V TY +LING C+ GR     + L+ +  M ++PDT TYNT+L   C  +   +AE
Sbjct: 175 AA-NVVTYTALINGYCRSGR---LADALNLIASMPVAPDTYTYNTVLKGLCGAKQWEKAE 230

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R    P+ V+F+T I  F +NG LD A+     M   G  PD V+Y+ ++NG+
Sbjct: 231 ELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGF 290

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V +AL + + ML   C  + V YN  L GLC A+   +  +L  EM+ +   P+ 
Sbjct: 291 SEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNE 347

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ L    C+ G ++ A+ + + M +   +PD+V YNTLI+ F + G ++ A  L   
Sbjct: 348 ATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDS 407

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+    +P+ IS+   +   C      +   L  +M+ +      ++ N +I   C+ G 
Sbjct: 408 MLC---NPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGL 464

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E   +M      PD ++Y++LINGF  +  ++ A  L   M  +   PD+ +YN 
Sbjct: 465 VNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCK---PDIFSYNA 521

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G CR  R  D+  ++  M  K   P+  T+  LIN    +     A     +M + G
Sbjct: 522 VLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYG 581

Query: 481 FVPD 484
             PD
Sbjct: 582 STPD 585



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 3/148 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  + + A   +  M +K   P+ +T+N LIN+ C++GF + A ++   M   G
Sbjct: 522 VLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYG 581

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +FTYN+LING  ++GR D A  +L     M   PD  +YN+ L   CR E   EAE
Sbjct: 582 STPDIFTYNALINGFSEQGRLDDALNLLS---TMSCKPDAISYNSTLKGLCRAERWKEAE 638

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           EI  EM R+   P+ V+F     +F  N
Sbjct: 639 EIVAEMLRKKCPPNEVTFKYANQLFIPN 666



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
            V+ E++D A  LV  M +    P VI  N+++   C   R+ D+E +L  + E G + D
Sbjct: 86  LVQLEDLDAALRLVGSMPSSE-PPAVIACNILIKKLCAHRRLADAERVLDALKESG-SAD 143

Query: 450 RSTYTTLINGHVSQNNLKEAFR 471
             ++ TL+ G+     L +A R
Sbjct: 144 AVSHNTLVAGYCRDGRLADAER 165


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 251/489 (51%), Gaps = 5/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGF-----LEEAFQLMNS 55
           ++N   + ++ +  +    E++  G  P+  TY  ++N YC+  F     + +A +++  
Sbjct: 219 LLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEE 278

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M   G  P V TY + I+GLC+ G  + A  ++ ++       ++  YN ++ E CR   
Sbjct: 279 MEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGE 338

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + EA E+  +M   G++P   S+S LI    + GQ+++AL    EM  + + P  V Y+ 
Sbjct: 339 LHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSS 398

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           + +G C++G    +L M   +  +G   DV++YNT++NG    + +  A  L +EM   G
Sbjct: 399 LFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNG 458

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+ +TF  LIHG CK   ++KAL +F IM +  ++ +I T N + D F + G   +A 
Sbjct: 459 SVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEAL 518

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           KL  ++    I PN  +Y I+I   C      +A+ +   M+   + P  +  NT+I GY
Sbjct: 519 KLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGY 578

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            +  + +KA    +KM+  G+ P  ++Y  LIN F     M +A+ L  +M  +GLVPD 
Sbjct: 579 AKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDE 638

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           I +  I+ GFC+ G M  +  +   M + G +P+  TYT LI+G+     + +A    ++
Sbjct: 639 IIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNK 698

Query: 476 MLQRGFVPD 484
           M +    PD
Sbjct: 699 MKRDNVTPD 707



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 245/455 (53%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ LC+   ++ A   + ++  +    ++  YN +I+ +CR G L EAF+L+  M   G+
Sbjct: 295 IHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGI 354

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P  ++Y+ LI+GLCKKG+ ++A ++++EM+Q  + P   TY++L    C+      +  
Sbjct: 355 SPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLS 414

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F  +   G   D++S++TLI  F     +  A     EM+  G VP++  +  +I+G+C
Sbjct: 415 MFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFC 474

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           +   + +AL++   ML+ G  +++ T N + +   R     EA  L NE+ + G+ P+ Y
Sbjct: 475 KRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSY 534

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  +I   CK+    KA  +  +M + ++ P  + YNTLIDG+ K     KA  L+A M
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +   I P+ ++Y +LIN + +   + EA+ L+ EM+ KG+ P  +    II G+C+ GD 
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDM 654

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A     +M   G  P+ ++Y  LI+G+ + + MDKA  L +KM+   + PD +TY  +
Sbjct: 655 KSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTAL 714

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           + G+   G       +   M E G+ P+ + Y TL
Sbjct: 715 IFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 246/489 (50%), Gaps = 5/489 (1%)

Query: 1   MVNALCK-----DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS 55
           M+N  CK     +  I  A   L EME  G  P  VTY   I+  CR G +E A +L+  
Sbjct: 254 MMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRD 313

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           +  +      + YN++I+  C+ G    A E+L++M   G+SP   +Y+ L+   C+K  
Sbjct: 314 LRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQ 373

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + +A ++  EM +  V P +V++S+L     ++G  + +L  F  + + G   D + Y  
Sbjct: 374 VEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNT 433

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +ING+     +  A K+  EM   G V +  T+N +++G C+ + L +A ++F  ML+ G
Sbjct: 434 LINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVG 493

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           V  + +T   +     ++G+  +AL L + +    I P+  TYN +I   CK  + EKA 
Sbjct: 494 VQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAW 553

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           ++   M+   + P  I Y  LI+GY    + T+A  L+ +M+  GI P++V+   +I  +
Sbjct: 554 EVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMF 613

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
                  +A     +M+ +G+ PD I +  +I GF +  +M  A+AL  +M   G  P+V
Sbjct: 614 SNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNV 673

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           +TY  ++ G+ +  RM  ++ +  +M    + PD  TYT LI G+ S           +E
Sbjct: 674 VTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNE 733

Query: 476 MLQRGFVPD 484
           M + G  P+
Sbjct: 734 MKENGVFPN 742



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 219/418 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C++ ++  A   L +M   G+ P   +Y+ LI+  C++G +E+A  L+  M    
Sbjct: 329 VIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSN 388

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP + TY+SL +GLCK G  + +  +   +   G   D  +YNTL+     + +M  A 
Sbjct: 389 VKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSAC 448

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G  P+  +F+ LI  F +  +LD+AL  F  M   G+  +     I+ + +
Sbjct: 449 KLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEF 508

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   EALK+ +E+ + G V +  TYN ++  LC+ +   +A ++   ML+  VFP  
Sbjct: 509 NREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCA 568

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + TLI G+ K  N  KAL L+  M +  I P IVTY  LI+ F    +M++A  L+ +
Sbjct: 569 IHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKE 628

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI + + P+ I +  +I G+C +G +  A+ L+ EM   G  P +V+   +I GY +   
Sbjct: 629 MIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKR 688

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
             KAD   +KM  + V PD ++Y  LI G+      D+   + ++M+  G+ P+   Y
Sbjct: 689 MDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAY 746



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 237/494 (47%), Gaps = 40/494 (8%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           +  N LI  +     L +A  +       GL+  + + N L+N   +  + +  + + +E
Sbjct: 179 IVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEE 238

Query: 91  MLQMGLSPDTATYNTLLVESCRKE-----NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +   G SP+  TY  ++   C+       ++ +A E+  EM   G +P +V++   I   
Sbjct: 239 LKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGL 298

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G ++ AL   R+++      ++  Y  +I+ +CRNG + EA ++ ++M   G     
Sbjct: 299 CRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTA 358

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            +Y+ +++GLC+   + +A DL  EM++  V P   T+++L  G CK G    +L++F  
Sbjct: 359 YSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHN 418

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM-- 323
           +  +  K D+++YNTLI+GF    +M  A KL  +M      PN  ++  LI+G+C    
Sbjct: 419 LGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQR 478

Query: 324 ---------------------------------GHVTEAFRLWYEMVGKGIKPTLVSCNT 350
                                            GH  EA +L  E+   GI P   + N 
Sbjct: 479 LDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNI 538

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +IK  C+     KA E L  M+   V P +I YNTLI+G+ ++ N  KA  L +KM   G
Sbjct: 539 VIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVG 598

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           + P ++TY +++  F  + +M ++  +   MI+KGL PD   +T +I G     ++K A+
Sbjct: 599 IPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAW 658

Query: 471 RFHDEMLQRGFVPD 484
             ++EM Q G  P+
Sbjct: 659 ALYEEMSQWGKSPN 672



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 210/396 (53%), Gaps = 2/396 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +++ A   + EM Q  V P  VTY++L +  C+ G  E +  + +++  +G
Sbjct: 364 LIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEG 423

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K  V +YN+LING   +     A +++ EM   G  P++ T+N L+   C+++ + +A 
Sbjct: 424 YKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKAL 483

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M + GV  +I + + +   F+R G    AL    E++  G+VP++  Y I+I   
Sbjct: 484 EVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWL 543

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+     +A ++   ML+       + YNT+++G  +    T+A  L+ +ML+ G+ P  
Sbjct: 544 CKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSI 603

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI+       M +A  LF  M +K + PD + +  +I GFCKVG+M+ A  L+ +
Sbjct: 604 VTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEE 663

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     SPN ++Y  LI+GY  +  + +A  L+ +M    + P  ++   +I GY   G 
Sbjct: 664 MSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGY 723

Query: 361 ASKADEFLSKMVSEGVDPDSISYNT--LINGFVREE 394
           + +  E  ++M   GV P+  +Y T  L  G VREE
Sbjct: 724 SDRVREMFNEMKENGVFPNYTAYATLGLHLGVVREE 759



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 177/357 (49%), Gaps = 5/357 (1%)

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
            I+  + LI +F+ N  L  A   F + +  GL  + +    ++N +           + 
Sbjct: 177 SIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLF 236

Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKM-----LTEADDLFNEMLERGVFPDFYTFTTLIH 248
           +E+ + G   +V TY  ++N  C+        + +A ++  EM   G  P   T+   IH
Sbjct: 237 EELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIH 296

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G C+ G +  AL L   +  ++   +   YN +I  FC+ GE+ +A +L  DM S  ISP
Sbjct: 297 GLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISP 356

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
              SY ILI+G C  G V +A  L  EMV   +KP+LV+ +++  G C+SG    +    
Sbjct: 357 TAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMF 416

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             + +EG   D ISYNTLINGFV + +M  A  LV +M   G VP+  T+N ++ GFC++
Sbjct: 417 HNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKR 476

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            R+  +  +   M++ G+  +  T   + +    + +  EA +  +E+   G VP+ 
Sbjct: 477 QRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNS 533


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/442 (32%), Positives = 245/442 (55%), Gaps = 4/442 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-GK 59
           +V +L K   +  A      M+ +   P  VTYN LIN+ C  G   +A  L  SM   K
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            ++P  +TYN+LI+GLC  G  + A+++L EM    ++ +  TY++++    ++    E+
Sbjct: 76  RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  EM   G  PD+ +F+ ++  F+R+  +++A   ++ M  +G  PDNV Y I+I+G
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195

Query: 180 YCRNGFVLEALKMRDEMLEK--GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
             + G + E+LK+  EM  +  G V +V+T++T+++GLCR   L +A ++F  MLE G  
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+ YT+TTLI G C+   + +A  LF+ MTQ  I PD V YN+LI G+CK G M++A KL
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 315

Query: 298 WADMIS-RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           + +M     + P  +++  LI+G+C +G +  A  L  EM  KG+     +   +I G  
Sbjct: 316 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLS 375

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           R+    +A E   +M  +    D +S  + + G  +  N+D+A+A+       G VP+  
Sbjct: 376 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 435

Query: 417 TYNVILTGFCRQGRMHDSELIL 438
           T+ ++     + GR+ D++ ++
Sbjct: 436 TFRILSESLIKLGRVEDAQKLM 457



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 238/452 (52%), Gaps = 4/452 (0%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            Y+ ++ +  + G L +A ++  +M  +   P + TYN LIN  C  G   +A ++   M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 92  -LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
             +  + PD  TYNTL+   C   N   A ++  EM  + +A ++ ++S++I    +  +
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
            + +     EM +AG  PD   +  ++ G+ R+  + +A ++   M+E G   D V+Y+ 
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 211 ILNGLCRAKMLTEADDLFNEMLER--GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           +++GL +   L E+  + +EM  R  G  P+  TF+TLIHG C+ G + KAL +F  M +
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
              KP+  TY TLI G C+  ++ +A +L+  M    I P+ ++Y  LI GYC  G + E
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 329 AFRLWYEMVG-KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           A +L+ EM G  G++PT+V+ NT+I G+C+ G   +A+E +++M ++G+  D+ +Y  LI
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  R   +D+A  +  +M  +  + D ++    + G C+ G +  +  +     + G  
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV 431

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           P+  T+  L    +    +++A +  +    R
Sbjct: 432 PNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 215/422 (50%), Gaps = 4/422 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            Y+ ++  L K G   +A EV + M      P   TYN L+   C      +A ++F  M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 127 SR-RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
            R + V PD  +++TLI     +G  + A     EM+   +  +   Y+ II    +   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
             E+ K+ +EM+  GC  DV  +N ++ G  R+  + +A +++  M+E G  PD  ++  
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIK--PDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           LIHG  K G ++++L +   M  ++    P+++T++TLI G C+ GE+EKA +++  M+ 
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
               PN  +Y  LI G C    V +A  L+ +M    I P  V+ N++I GYC+ G   +
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 364 ADEFLSKMVS-EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           A++   +M    G+ P  +++NTLI+GF +   + +A  LV++M  +GL  D  TY +++
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G  R  ++ ++  +  +M EK    D  +  + + G     N+ +A+   +   + G V
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV 431

Query: 483 PD 484
           P+
Sbjct: 432 PN 433



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 172/310 (55%), Gaps = 3/310 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS--G 58
           ++    + + ++ A+     M + G  PD V+Y+ LI+   + G L+E+ ++++ M+   
Sbjct: 157 VMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRA 216

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G  P V T+++LI+GLC+ G  ++A EV   ML+ G  P+  TY TL+   CR E + +
Sbjct: 217 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQ 276

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS-AGLVPDNVLYTIII 177
           A E+F +M++  + PD V++++LI  + + G +D A   +REM   AGL P  V +  +I
Sbjct: 277 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 336

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G+C+ G +  A ++  EM  KG   D  TY  ++ GL RA  L EA +++ +M E+   
Sbjct: 337 DGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFL 396

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            D  +  + + G CK GN+++A  +F+   +    P+  T+  L +   K+G +E A KL
Sbjct: 397 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 456

Query: 298 WADMISRKIS 307
                +R I+
Sbjct: 457 MEPAKARDIT 466



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 153/292 (52%), Gaps = 3/292 (1%)

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M +  C +    Y+ ++  L +A ML +A ++F  M      P   T+  LI+  C  G 
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 256 MNKALNLFDIMT-QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
             KAL+LF  M  +K ++PD  TYNTLI G C  G  E A KL ++M  + I+ N  +Y 
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            +I          E++++  EM+  G  P + + N +++G+ RS +  KA E    MV  
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSK--MENQGLVPDVITYNVILTGFCRQGRMH 432
           G  PD++SY+ LI+G  +   +D++  ++S+  M   G VP+VIT++ ++ G CR G + 
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  +   M+E G  P++ TYTTLI G      + +A    ++M Q    PD
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPD 292



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 1/175 (0%)

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  ++      G + +A  ++  M  +   P+LV+ N +I   C +G+  KA +    M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 372 VSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
             E  V+PD  +YNTLI+G     N + A  L+S+M ++ +  +V TY+ I+    ++ +
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             +S  +L  M+  G NPD   +  ++ G    NN+++A   +  M++ G+ PD+
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDN 186


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 249/455 (54%), Gaps = 23/455 (5%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           + P+ +++N +I A C+ G ++ A ++   M+ +  +P VFTY +L++GLCK+ R D A 
Sbjct: 184 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 243

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +LDEM   G  P + T+N L+   C+K +M    ++   M  +G  P+ V+++T+I   
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 303

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+LD+A+     M ++  VP++V Y  +ING  + G  ++ + +   + E+G   + 
Sbjct: 304 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 363

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y+T+++GL + +   EA  L+ +M+E+G  P+   ++ LI G C++G +++A  +   
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 423

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K   P+  TY++LI GF K G  +KA ++W +M      PN I Y +LI+G C  G 
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 483

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSISY 383
           + EA  +W  M+G+G++P +V+ +++I G C +G      +  ++M+ +  D  PD ++Y
Sbjct: 484 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 543

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF------CRQGRMHDSEL- 436
           N L+    ++ ++  A  L++ M ++G  PD+IT N+ L          + GR    EL 
Sbjct: 544 NILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELV 603

Query: 437 --------------ILWRMIEKGLNPDRSTYTTLI 457
                         I+  M++K L P+ ST+  +I
Sbjct: 604 VRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERII 638



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 236/453 (52%), Gaps = 5/453 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSG--KGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           ++N+++N   +EG    A +      G    + P V ++N +I  +CK G  DRA EV  
Sbjct: 153 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 212

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           EM      PD  TY TL+   C+++ + EA  +  EM   G  P  V+F+ LI    + G
Sbjct: 213 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 272

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            + R       M   G VP+ V Y  IING C  G + +A+ + D M+   CV + VTY 
Sbjct: 273 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 332

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T++NGL +     +   L + + ERG   + Y ++TLI G  K+    +A+ L+  M +K
Sbjct: 333 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 392

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
             +P+IV Y+ LIDG C+ G++++A ++  +M+++  +PN  +Y  LI G+   G+  +A
Sbjct: 393 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 452

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            R+W EM      P  +  + +I G C  G   +A    + M+  G+ PD ++Y+++I+G
Sbjct: 453 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 512

Query: 390 FVREENMDKAFALVSKM--ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
                +++    L ++M  +     PDV+TYN++L   C+Q  +  +  +L  M+++G N
Sbjct: 513 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 572

Query: 448 PDRSTYTTLINGHVSQNNLKEAFR-FHDEMLQR 479
           PD  T    +N    + N  +  R F DE++ R
Sbjct: 573 PDLITCNIFLNALREKLNPPQDGREFLDELVVR 605



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 232/452 (51%), Gaps = 9/452 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC---DRAKEVL 88
           T+ +LI  Y   G     FQ+ + M  +     VF   + I      G+    ++A E+ 
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRER---RVFIEKNFILVFRAYGKAHLPEKAIELF 138

Query: 89  DEML-QMGLSPDTATYNTLLVESCRKENMSEAEEIF-CEMS-RRGVAPDIVSFSTLIGIF 145
             M+ +        ++N++L    ++     A E + C +  +  ++P+++SF+ +I   
Sbjct: 139 GRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAM 198

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G +DRA+  FREM      PD   Y  +++G C+   + EA+ + DEM  +GC    
Sbjct: 199 CKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSS 258

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT+N ++NGLC+   +     L + M  +G  P+  T+ T+I+G C  G ++KA++L D 
Sbjct: 259 VTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 318

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M      P+ VTY TLI+G  K G       L + +  R    N  +Y  LI+G      
Sbjct: 319 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEK 378

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             EA  LW +MV KG +P +V  + +I G CR G   +A E L +MV++G  P++ +Y++
Sbjct: 379 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 438

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI GF +  N  KA  +  +M     VP+ I Y+V++ G C  G++ ++ ++   M+ +G
Sbjct: 439 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 498

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           L PD   Y+++I+G  +  +++   +  +EML
Sbjct: 499 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 157/282 (55%)

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +V+++N ++  +C+  ++  A ++F EM  +   PD +T+ TL+ G CK+  +++A+ L 
Sbjct: 187 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 246

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D M  +   P  VT+N LI+G CK G+M +  KL  +M  +   PN ++Y  +ING C  
Sbjct: 247 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 306

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G + +A  L   MV     P  V+  T+I G  + G +      LS +   G   +  +Y
Sbjct: 307 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 366

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           +TLI+G  +EE  ++A  L  KM  +G  P+++ Y+ ++ G CR+G++ +++ IL  M+ 
Sbjct: 367 STLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN 426

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           KG  P+  TY++LI G     N ++A R   EM +   VP++
Sbjct: 427 KGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNE 468



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 3/248 (1%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           TF +LI  +   G+      +FD M ++        +  +   + K    EKA +L+  M
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 141

Query: 302 ISR-KISPNYISYGILINGYCSMGHVTEAFRLWYEMVG--KGIKPTLVSCNTIIKGYCRS 358
           +   +      S+  ++N     G    A   +   VG    I P ++S N +IK  C+ 
Sbjct: 142 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 201

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A E   +M  +  +PD  +Y TL++G  +E+ +D+A  L+ +M+ +G  P  +T+
Sbjct: 202 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           NV++ G C++G M     ++  M  KG  P+  TY T+ING   +  L +A    D M+ 
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321

Query: 479 RGFVPDDA 486
              VP+D 
Sbjct: 322 SKCVPNDV 329



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 23/249 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC++ K+D AK  LCEM  KG  P+  TY++LI  + + G  ++A ++   M+   
Sbjct: 404 LIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN 463

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    Y+ LI+GLC+ G+   A  +   ML  GL PD   Y++++   C   ++    
Sbjct: 464 CVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGL 523

Query: 121 EIFCEM--SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           ++F EM        PD+V+++ L+    +   +  A+     M   G  PD +   I +N
Sbjct: 524 KLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLN 583

Query: 179 GY---------------------CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
                                   +   ++ A K+ + ML+K    +  T+  I+  LC+
Sbjct: 584 ALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 643

Query: 218 AKMLTEADD 226
            K +    D
Sbjct: 644 PKKVQAIID 652


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 208/358 (58%), Gaps = 3/358 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK+  I  AK+   E+ ++G+ P TV++NTLIN  C+   L+E F+L  +M    
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFTY+ LI+GLCK+GR D A+++ DEM Q GL P+  T+  L+    R   M  A 
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAM 348

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + +M   GV PD+V ++TL+    + G +++A     EMK  G+ PD + YT +I+GY
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGY 408

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A+++R  M E+G V+D V +  +++G CR   + +A+    EM+E G+ PD 
Sbjct: 409 CKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I G+CK GN+     L   M     KP ++TYN L++G CK G+M+ AN L   
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           M++  ++P+ I+Y IL+ G+C  G   +  +L  E   KG+        +++  Y +S
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLVSEYNKS 583



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 239/449 (53%), Gaps = 3/449 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K  +A +F   ++  G       ++ L+ AY   GF+ +A Q    +     +       
Sbjct: 133 KDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCG 192

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            L++ +              E+L+ G  P    YN L+ + C++ ++ +A+ IF E+ +R
Sbjct: 193 YLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKR 252

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G+ P  VSF+TLI    ++  LD      + M+   + PD   Y+++I+G C+ G +  A
Sbjct: 253 GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            ++ DEM ++G   + +T+  +++G  R++ +  A + +++ML  GV PD   + TL++G
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK G++NKA  L D M    +KPD +TY TLIDG+CK G++E A ++   M    +  +
Sbjct: 373 LCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            +++  LI+G+C  G V +A R   EMV  G+KP   +   +I GYC+ G+     + L 
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M   G  P  I+YN L+NG  ++  M  A  L+  M N G+ PD ITYN++L G C+ G
Sbjct: 493 EMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           +  D   +L    EKGL  D + YT+L++
Sbjct: 553 KAED---LLKLRNEKGLIVDYAYYTSLVS 578



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 205/365 (56%), Gaps = 3/365 (0%)

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           + E+   G  P +  ++ LI  F + G +  A + F E++  GL P  V +  +ING C+
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           +  + E  +++  M E     DV TY+ +++GLC+   L  A+ LF+EM +RG+ P+  T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           FT LI G  +   M+ A+N +  M    +KPD+V YNTL++G CKVG++ KA KL  +M 
Sbjct: 331 FTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMK 390

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              + P+ I+Y  LI+GYC  G +  A  +   M  +G+    V+   +I G+CR G   
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            A+  L +MV  G+ PD  +Y  +I+G+ ++ N+   F L+ +M+  G  P VITYNV++
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G C+QG+M ++ ++L  M+  G+ PD  TY  L+ GH      ++  +  +E   +G +
Sbjct: 511 NGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLI 567

Query: 483 PDDAF 487
            D A+
Sbjct: 568 VDYAY 572



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 207/408 (50%), Gaps = 46/408 (11%)

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           C   N   A ++F E         I+ F     + SR G+   A ++   + +AG    N
Sbjct: 105 CAMANFLSAHQMFQECQ------SIIRF-----LVSRKGKDSAASVFAAILDTAGTRCSN 153

Query: 171 VLYTIIINGYCRNGFVLEALK-----------------------------------MRDE 195
            ++  ++  Y  +GFV +A++                                      E
Sbjct: 154 FVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSE 213

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           +LE G    V  YN ++N  C+   + +A  +FNE+ +RG+ P   +F TLI+G CK  N
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +++   L   M +  I PD+ TY+ LI G CK G ++ A +L+ +M  R + PN I++  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LI+G      +  A   +++M+  G+KP LV  NT++ G C+ GD +KA + + +M   G
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           + PD I+Y TLI+G+ +E +++ A  +   M  +G+V D + +  +++GFCR GR+ D+E
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             L  M+E G+ PD +TYT +I+G+  + N+K  F+   EM   G  P
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 89/171 (52%)

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
           G L++   +       +  + E++  G  P +   N +I  +C+ G    A    +++  
Sbjct: 192 GYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRK 251

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
            G+ P ++S+NTLING  +  N+D+ F L   ME   + PDV TY+V++ G C++GR+  
Sbjct: 252 RGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDV 311

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +E +   M ++GL P+  T+T LI+G      +  A   + +ML  G  PD
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPD 362


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 249/455 (54%), Gaps = 23/455 (5%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           + P+ +++N +I A C+ G ++ A ++   M+ +  +P VFTY +L++GLCK+ R D A 
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +LDEM   G  P + T+N L+   C+K +M    ++   M  +G  P+ V+++T+I   
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 287

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+LD+A+     M ++  VP++V Y  +ING  + G  ++ + +   + E+G   + 
Sbjct: 288 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 347

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y+T+++GL + +   EA  L+ +M+E+G  P+   ++ LI G C++G +++A  +   
Sbjct: 348 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 407

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K   P+  TY++LI GF K G  +KA ++W +M      PN I Y +LI+G C  G 
Sbjct: 408 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 467

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSISY 383
           + EA  +W  M+G+G++P +V+ +++I G C +G      +  ++M+ +  D  PD ++Y
Sbjct: 468 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 527

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF------CRQGRMHDSEL- 436
           N L+    ++ ++  A  L++ M ++G  PD+IT N+ L          + GR    EL 
Sbjct: 528 NILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELV 587

Query: 437 --------------ILWRMIEKGLNPDRSTYTTLI 457
                         I+  M++K L P+ ST+  +I
Sbjct: 588 VRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERII 622



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 236/453 (52%), Gaps = 5/453 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSG--KGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
           ++N+++N   +EG    A +      G    + P V ++N +I  +CK G  DRA EV  
Sbjct: 137 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           EM      PD  TY TL+   C+++ + EA  +  EM   G  P  V+F+ LI    + G
Sbjct: 197 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 256

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            + R       M   G VP+ V Y  IING C  G + +A+ + D M+   CV + VTY 
Sbjct: 257 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 316

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T++NGL +     +   L + + ERG   + Y ++TLI G  K+    +A+ L+  M +K
Sbjct: 317 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 376

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
             +P+IV Y+ LIDG C+ G++++A ++  +M+++  +PN  +Y  LI G+   G+  +A
Sbjct: 377 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            R+W EM      P  +  + +I G C  G   +A    + M+  G+ PD ++Y+++I+G
Sbjct: 437 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 496

Query: 390 FVREENMDKAFALVSKM--ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
                +++    L ++M  +     PDV+TYN++L   C+Q  +  +  +L  M+++G N
Sbjct: 497 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 556

Query: 448 PDRSTYTTLINGHVSQNNLKEAFR-FHDEMLQR 479
           PD  T    +N    + N  +  R F DE++ R
Sbjct: 557 PDLITCNIFLNALREKLNPPQDGREFLDELVVR 589



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 232/452 (51%), Gaps = 9/452 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC---DRAKEVL 88
           T+ +LI  Y   G     FQ+ + M  +     VF   + I      G+    ++A E+ 
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRER---RVFIEKNFILVFRAYGKAHLPEKAIELF 122

Query: 89  DEML-QMGLSPDTATYNTLLVESCRKENMSEAEEIF-CEMS-RRGVAPDIVSFSTLIGIF 145
             M+ +        ++N++L    ++     A E + C +  +  ++P+++SF+ +I   
Sbjct: 123 GRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAM 182

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G +DRA+  FREM      PD   Y  +++G C+   + EA+ + DEM  +GC    
Sbjct: 183 CKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSS 242

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT+N ++NGLC+   +     L + M  +G  P+  T+ T+I+G C  G ++KA++L D 
Sbjct: 243 VTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 302

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M      P+ VTY TLI+G  K G       L + +  R    N  +Y  LI+G      
Sbjct: 303 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEK 362

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             EA  LW +MV KG +P +V  + +I G CR G   +A E L +MV++G  P++ +Y++
Sbjct: 363 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 422

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI GF +  N  KA  +  +M     VP+ I Y+V++ G C  G++ ++ ++   M+ +G
Sbjct: 423 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 482

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           L PD   Y+++I+G  +  +++   +  +EML
Sbjct: 483 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 157/282 (55%)

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +V+++N ++  +C+  ++  A ++F EM  +   PD +T+ TL+ G CK+  +++A+ L 
Sbjct: 171 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 230

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D M  +   P  VT+N LI+G CK G+M +  KL  +M  +   PN ++Y  +ING C  
Sbjct: 231 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 290

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G + +A  L   MV     P  V+  T+I G  + G +      LS +   G   +  +Y
Sbjct: 291 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 350

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           +TLI+G  +EE  ++A  L  KM  +G  P+++ Y+ ++ G CR+G++ +++ IL  M+ 
Sbjct: 351 STLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN 410

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           KG  P+  TY++LI G     N ++A R   EM +   VP++
Sbjct: 411 KGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNE 452



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 3/248 (1%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           TF +LI  +   G+      +FD M ++        +  +   + K    EKA +L+  M
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 302 ISR-KISPNYISYGILINGYCSMGHVTEAFRLWYEMVG--KGIKPTLVSCNTIIKGYCRS 358
           +   +      S+  ++N     G    A   +   VG    I P ++S N +IK  C+ 
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A E   +M  +  +PD  +Y TL++G  +E+ +D+A  L+ +M+ +G  P  +T+
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           NV++ G C++G M     ++  M  KG  P+  TY T+ING   +  L +A    D M+ 
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305

Query: 479 RGFVPDDA 486
              VP+D 
Sbjct: 306 SKCVPNDV 313



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 23/249 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC++ K+D AK  LCEM  KG  P+  TY++LI  + + G  ++A ++   M+   
Sbjct: 388 LIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN 447

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    Y+ LI+GLC+ G+   A  +   ML  GL PD   Y++++   C   ++    
Sbjct: 448 CVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGL 507

Query: 121 EIFCEM--SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           ++F EM        PD+V+++ L+    +   +  A+     M   G  PD +   I +N
Sbjct: 508 KLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLN 567

Query: 179 GY---------------------CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
                                   +   ++ A K+ + ML+K    +  T+  I+  LC+
Sbjct: 568 ALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 627

Query: 218 AKMLTEADD 226
            K +    D
Sbjct: 628 PKKVQAIID 636


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 149/472 (31%), Positives = 246/472 (52%), Gaps = 2/472 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC  +        L  M + GV P  VT+ TLIN  C EG +  A +  +S+   G
Sbjct: 112 IINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMG 171

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTA-TYNTLLVESCRKENMSEA 119
            +   +TY ++INGLCK G    A   L+++       D    Y+T++   C+   + EA
Sbjct: 172 HQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEA 231

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F  M+ +G+ PD+V++++LI      G+   A      M   G++P+   + ++++ 
Sbjct: 232 LNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDN 291

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C++G +  A  +   M+  G   DVVTYN++++G C    + +A  +F  M+ +G  P+
Sbjct: 292 FCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPN 351

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+++LIHG CK  N+NKAL L   M    + PD+VT++TLI GFCK G+ E A +L+ 
Sbjct: 352 LVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFC 411

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M      PN  +  I+++G       +EA  L+ EM    ++  +V  N ++ G C  G
Sbjct: 412 TMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFG 471

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             + A E  S + S+G+  D ++Y T+I G  +E  +D A  L+ KME  G +P+  TYN
Sbjct: 472 KLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYN 531

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           V + G  ++  +  S   L  M  KGL+ D +T T L+  + S N    A  
Sbjct: 532 VFVRGLLQRYDISRSTKYLLLMKGKGLSADATT-TELLISYFSANKENSALH 582



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 236/475 (49%), Gaps = 1/475 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           ++A  F  +M      P    +  L     +         L+  +   G+KP V+T   +
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTII 112

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           IN LC          VL  M ++G+ P   T+ TL+   C + N++ A      +   G 
Sbjct: 113 INCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGH 172

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL-YTIIINGYCRNGFVLEAL 190
             +  ++  +I    + G    A++Y  ++K      D V+ Y+ I++  C++G V EAL
Sbjct: 173 QSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEAL 232

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +   M  KG   D+V YN++++GLC      EA  L   M+ +G+ P+  TF  L+   
Sbjct: 233 NLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNF 292

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CKDG +++A  +   M    ++PD+VTYN++I G C + +M  A K++  MI +   PN 
Sbjct: 293 CKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNL 352

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LI+G+C   ++ +A  L  EMV  G+ P +V+ +T+I G+C++G    A E    
Sbjct: 353 VTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCT 412

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M      P+  +   +++G  + +   +A +L  +ME   L  +V+ YN++L G C  G+
Sbjct: 413 MHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGK 472

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++D++ +   +  KG+  D   YTT+I G   +  L +A     +M + G +P++
Sbjct: 473 LNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNE 527



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 234/461 (50%), Gaps = 1/461 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G+ PD  T   +IN  C        F ++  M   G+ P V T+ +LINGLC +G   RA
Sbjct: 101 GIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARA 160

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV-SFSTLIG 143
               D +  MG   ++ TY  ++   C+  + S A     ++  R    D+V ++ST++ 
Sbjct: 161 ARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMD 220

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
              ++G +  AL  F  M S G+ PD V Y  +I+G C  G   EA  +   M+ KG + 
Sbjct: 221 SLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMP 280

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +V T+N +++  C+  M++ A  +   M+  GV PD  T+ ++I GHC    M  A+ +F
Sbjct: 281 NVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVF 340

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           ++M  K   P++VTY++LI G+CK   + KA  L  +M++  ++P+ +++  LI G+C  
Sbjct: 341 ELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKA 400

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G    A  L+  M      P L +C  I+ G  +    S+A     +M    ++ + + Y
Sbjct: 401 GKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIY 460

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N +++G      ++ A  L S + ++G+  DV+ Y  ++ G C++G + D+E +L +M E
Sbjct: 461 NIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEE 520

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G  P+  TY   + G + + ++  + ++   M  +G   D
Sbjct: 521 NGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSAD 561



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 192/372 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCKD  +  A      M  KG+ PD V YN+LI+  C  G  +EA  L+ +M  KG
Sbjct: 218 IMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKG 277

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T+N L++  CK G   RAK ++  M+ +G+ PD  TYN+++   C    M +A 
Sbjct: 278 IMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAV 337

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M  +G  P++V++S+LI  + +   +++AL    EM ++GL PD V ++ +I G+
Sbjct: 338 KVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGF 397

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A ++   M E     ++ T   IL+GL + +  +EA  LF EM +  +  + 
Sbjct: 398 CKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNV 457

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  ++ G C  G +N A  LF  +  K IK D+V Y T+I G CK G ++ A  L   
Sbjct: 458 VIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMK 517

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y + + G      ++ + +    M GKG+     +   +I  +  + +
Sbjct: 518 MEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSANKE 577

Query: 361 ASKADEFLSKMV 372
            S    FL + V
Sbjct: 578 NSALHVFLQEFV 589


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 263/486 (54%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C  +++  A  F   ME++G+ PD V ++ +I  +C+   +E+A ++   M   G
Sbjct: 351 LITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVG 410

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P     + +I G  K    + A E+ ++  +  ++      N + +  C++  +  A 
Sbjct: 411 IAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMC-NKIFLLLCKQGKVDAAT 469

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M  +G+ P++V ++ ++    R   +D A   F EM   GL P+N  Y+I+I+G+
Sbjct: 470 SFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGF 529

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP-D 239
            +N     A ++ ++M+      + V YNTI+NGLC+    ++A ++   +++   +   
Sbjct: 530 FKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMG 589

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++ ++I G  K+G+ + A+  +  M++  I P++VT+ +LI+GFCK   M+ A ++  
Sbjct: 590 CTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIH 649

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M S+ +  +  +YG LI+G+C    +  A+ L+ E++  G+ P +   N +I G+   G
Sbjct: 650 EMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLG 709

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A +   KMV++G+  D  +Y T+I+G +++ N+  A  L S++   G+VPD I Y 
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYV 769

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++ G  ++G+   +  +L  M +K   P+   Y+T+I GH  + NL EAFR HDEML++
Sbjct: 770 VLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEK 829

Query: 480 GFVPDD 485
           G V DD
Sbjct: 830 GLVHDD 835



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 155/555 (27%), Positives = 250/555 (45%), Gaps = 83/555 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN L     +DS+K F  E+  +        +N L+NAY R   ++ A    N M  + 
Sbjct: 152 MVNNL-----VDSSKRFDFELSSRA-------FNYLLNAYIRNRRMDYAVDCFNLMVDRN 199

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V   N++++ L +    D AKE+ ++M+ +G++ D  T   L+  S R+    EA 
Sbjct: 200 VVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAM 259

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP-DNVLYTIIING 179
           +IF  +  RG  PD + FS  +    +   L  AL   REM+  G VP     YT +I  
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVA 319

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G + EA+K++DEM+  G  M V+   +++ G C    L +A D FN M E G+ PD
Sbjct: 320 CVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPD 379

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG--------------- 284
              F+ +I   CK+  M KA+ ++  M    I P  V  + +I G               
Sbjct: 380 KVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFN 439

Query: 285 -------------------FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                               CK G+++ A      M ++ I PN + Y  ++  +C M +
Sbjct: 440 DSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKN 499

Query: 326 VTEAFRLWYEMVGKGIKP-----------------------------------TLVSCNT 350
           +  A  ++ EM+ KG++P                                     V  NT
Sbjct: 500 MDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNT 559

Query: 351 IIKGYCRSGDASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           II G C+ G  SKA E L  ++ E        SYN++I+GF +E + D A     +M   
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSEN 619

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G+ P+V+T+  ++ GFC+  RM  +  ++  M  K L  D   Y  LI+G   +N++K A
Sbjct: 620 GISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTA 679

Query: 470 FRFHDEMLQRGFVPD 484
           +    E+L+ G +P+
Sbjct: 680 YTLFSELLELGLMPN 694


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 250/507 (49%), Gaps = 51/507 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ ++D A+  L    ++G  PD   Y+ LI +YC+ G L  A     +M   G
Sbjct: 418 VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHG 477

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++      + L+    K G    A     +    GL  D   YN  +   C+  NM+EA 
Sbjct: 478 IETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 537

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G+ PD + ++ LI  +   G++  A   F EM  A + PD V Y I+ +G+
Sbjct: 538 KLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGF 597

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV---- 236
           C++G V+E   + D M ++G   + +TY   + G CR   L+EA+ LFN + E+G+    
Sbjct: 598 CKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIE 657

Query: 237 -------------------------------FPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                            D ++ + LI+  C+ GN+  A N+  I
Sbjct: 658 VMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKI 717

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +  + PD+++Y+ LI  +C+ G+M+KA+  + DM+ R +S + I Y IL+NGYC  G 
Sbjct: 718 MLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGR 777

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS-------GDASKADEFL---------S 369
           + EA +L+ +M   GIKP +++   ++ G+ +        G A +   FL         S
Sbjct: 778 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 837

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M    ++PD   Y  LI+G  + E + +A  L  +M  +GL PD   Y  ++ G+C QG
Sbjct: 838 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 897

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTL 456
            +  +E +L  MI+KG+ PD  T++ L
Sbjct: 898 EISKAEDLLQEMIDKGIEPDELTFSVL 924



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 275/534 (51%), Gaps = 53/534 (9%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            LC   K D A + L E+ ++ V  + + YN +++  C+E  L+EA +L+ + + +G  P
Sbjct: 386 GLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNP 445

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-SEAEEI 122
            V+ Y+ LI   CK G    A +  + M+  G+  +    + LL +  RK  M SEA   
Sbjct: 446 DVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLL-QCFRKLGMTSEAIAY 504

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           F +    G+  D V ++  +  + +NG ++ A+    EMK  GL PD + YT +I+GYC 
Sbjct: 505 FLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCL 564

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G +  A ++ +EML+     D+VTYN + +G C++ ++ E  DL + M ++G+ P+  T
Sbjct: 565 KGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLT 624

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF----------------- 285
           +   I G C+ GN+++A  LF+++ +K I    V Y++++ G+                 
Sbjct: 625 YGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVA 684

Query: 286 ------------------CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
                             C+VG ++ A+ +   M+   + P+ ISY  LI+ YC  G + 
Sbjct: 685 RQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMD 744

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A   +++MV +G+   ++    ++ GYC++G   +A +   +M + G+ PD I+Y  L+
Sbjct: 745 KAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLL 804

Query: 388 NGFVRE------ENMDK---AF-------ALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           +G ++E      E + K   +F        L+S M++  + PDV  Y V++ G C+   +
Sbjct: 805 DGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYL 864

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            ++  +   M++KGL PD   YT LING+ SQ  + +A     EM+ +G  PD+
Sbjct: 865 VEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDE 918



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 241/465 (51%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM+   + PD  T+  +  +  +   ++EA Q+   M+  G+KP    Y+S + GLC  G
Sbjct: 332 EMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCG 391

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + D A  +L E+ +  +  +   YN ++   C++  + EAE++    +R+G  PD+  +S
Sbjct: 392 KYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYS 451

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI  + + G L  A+ ++  M S G+  +  + + ++  + + G   EA+    +  + 
Sbjct: 452 YLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDS 511

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  +D V YN  ++  C+   + EA  L NEM   G+ PD   +T LI G+C  G M  A
Sbjct: 512 GLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNA 571

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +F+ M + +I+PDIVTYN L  GFCK G + +   L   M  + + PN ++YGI I G
Sbjct: 572 QQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVG 631

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C  G+++EA  L+  +  KGI    V  ++++ GY  SG    A     ++  +G   D
Sbjct: 632 FCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVD 691

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             S + LIN   R  N+  A  +   M    +VPDVI+Y+ +++ +C+ G M  + L   
Sbjct: 692 HFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFH 751

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M+++GL+ D   YT L+NG+     L+EA +   +M   G  PD
Sbjct: 752 DMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPD 796



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 221/411 (53%), Gaps = 16/411 (3%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++  CK+  ++ A   L EM+  G+ PD + Y  LI+ YC +G ++ A Q+   M    +
Sbjct: 524 MDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANI 583

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P + TYN L +G CK G      ++LD M   GL P++ TY   +V  CR  N+SEAE 
Sbjct: 584 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEV 643

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F  +  +G+    V +S+++  +  +G  D A M F  +   G + D+   + +IN  C
Sbjct: 644 LFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLC 703

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R G V  A  +   MLE   V DV++Y+ +++  C+   + +A   F++M++RG+  D  
Sbjct: 704 RVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVI 763

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK---------VGEME 292
            +T L++G+CK G + +A  LF  MT   IKPD++ Y  L+DG  K         + +  
Sbjct: 764 VYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKER 823

Query: 293 KA-------NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           ++       NKL + M   +I P+   Y +LI+G C   ++ EA  L+ EM+ KG+ P  
Sbjct: 824 RSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDA 883

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
            +   +I GYC  G+ SKA++ L +M+ +G++PD ++++ L    +R   +
Sbjct: 884 YAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKI 934



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 212/425 (49%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P V+T+N L+  + + G  +      +EM    L+PD  T+  +     + + + EA
Sbjct: 302 GVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEA 361

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++ EM+  GV PD   +S+ +      G+ D A +  +E+    +  + + Y ++++G
Sbjct: 362 LQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDG 421

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+   + EA K+ +    +G   DV  Y+ ++   C+   L  A D +  M+  G+  +
Sbjct: 422 LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETN 481

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +  + L+    K G  ++A+  F       +  D V YN  +D +CK G M +A KL  
Sbjct: 482 CHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLN 541

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    ++P+ I Y  LI+GYC  G +  A +++ EM+   I+P +V+ N +  G+C+SG
Sbjct: 542 EMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSG 601

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +  + L +M  +G++P+S++Y   I GF R  N+ +A  L + +E +G+    + Y+
Sbjct: 602 LVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYS 661

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+   G    + ++  R+  +G   D  + + LIN      N++ A      ML+ 
Sbjct: 662 SMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEH 721

Query: 480 GFVPD 484
             VPD
Sbjct: 722 DVVPD 726


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 239/479 (49%), Gaps = 7/479 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC+  + D A+  +      G     V Y  L + YCR G L +A +++  M    
Sbjct: 109 LVRDLCRRGRPDDAERVVGAC---GPAATVVAYGALTDGYCRAGRLGDARRVVGGMP--- 162

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  +TYN LI+ LC++G+   A  VLD+ML  G +PD  TYN LL  +C+     +A 
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M   G  P+ V+++ L+      G +D AL   R + S G  P  V Y  ++ G 
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C      +A ++  EML + C  +  T+N ++  LCR  +L +A  L  +M + G   + 
Sbjct: 283 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 342

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I+G C+  N++ A+ L   M     KPDIVTYNTL+ G C   +   A +L  +
Sbjct: 343 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P+ +++  LI   C  G + +A  ++ +M  KG  P  ++ +TII G  ++  
Sbjct: 403 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 462

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A E  ++M  +G +PD I Y  L      ++ +++A   V K+++ G+ P  + YN 
Sbjct: 463 LDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 521

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           IL G CR G+   +  I+  M+  G  PD  TY  LI G   +  L EA     ++  R
Sbjct: 522 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSR 580



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 206/416 (49%), Gaps = 9/416 (2%)

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++ L  +G  D A  +++   +    PD A  N L+ + CR+    +AE +   +   G 
Sbjct: 78  LSALVHRGDLDAALRLVESSPR---PPDAALANRLVRDLCRRGRPDDAERV---VGACGP 131

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
           A  +V++  L   + R G+L  A    R +    + P+   Y  +I+  C  G V +AL 
Sbjct: 132 AATVVAYGALTDGYCRAGRLGDA---RRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALS 188

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + D+ML +GC  DVVTYN +L   C+ +   +A +L + M   G  P+  T+  L+ G C
Sbjct: 189 VLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC 248

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
            +G+++ AL L   +     KP  V YNT++ G C       A++L  +M+     PN  
Sbjct: 249 GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEA 308

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           ++ ++I   C  G + +A +L  +M   G    +V+ N II G C   +   A   LSKM
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 368

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            S G  PD ++YNTL+ G         A  L+  M   G +PD +T+N ++   C++G M
Sbjct: 369 KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 428

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            D+  +  +M +KG  P+  TY+T+I+G      L +A    +EM  +GF PD  +
Sbjct: 429 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIY 484



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 204/430 (47%), Gaps = 43/430 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  ++  A   L +M  +G  PD VTYN L+ A C+     +A +L++ M  +G
Sbjct: 173 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG 232

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN L++G+C +G  D A E+L  +   G  P T  YNT+L   C  E   +A+
Sbjct: 233 CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDAD 292

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R    P+  +F+ +I    R G L +A+    +M   G   + V Y  IING 
Sbjct: 293 ELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGL 352

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V  A+ +  +M   GC  D+VTYNT+L GLC A    +A++L + M + G  PD 
Sbjct: 353 CEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDN 412

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI   C+ G M  A+ +F  M  K   P+ +TY+T+I G  K  ++++A +L+ +
Sbjct: 413 VTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE 472

Query: 301 M-----------------------------ISRK-----ISPNYISYGILINGYCSMGHV 326
           M                               RK     ISP+ + Y  ++ G C  G  
Sbjct: 473 MGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKT 532

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A  +   MV  G  P  ++   +I+G    G  ++A E L K+ S  V         L
Sbjct: 533 EFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV---------L 583

Query: 387 INGFVREENM 396
           +N  ++ E +
Sbjct: 584 VNSLIKSEAL 593


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 250/484 (51%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK+ +I  A+  L EM  +GV P   TYN +I+ YC+ G +++A  +   M   G
Sbjct: 201 LIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNG 260

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  +TYN LI GLC + + D A+E+L++ +  G +P   T+  ++   C+ E + +A 
Sbjct: 261 CNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDAL 319

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M       D+ ++  LI +  +  +   A     EM + GL P+ V+YT II+GY
Sbjct: 320 RVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGY 379

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  AL++   M  +GC  +  TY++++ GL + + L +A  L  +M E G+ P  
Sbjct: 380 CKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 439

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI G CK    + A  LF++M Q  + PD   YN L    CK G  E+A   ++ 
Sbjct: 440 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YSF 496

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + +    ++Y  L++G+   G+   A  L  +MV +G K    + + +++  C+   
Sbjct: 497 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKK 556

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A   L +M   GV  + ++Y  +I+  ++E   D A ++ ++M + G  P   TY V
Sbjct: 557 LNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTV 616

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            ++ +C+ G++ ++E ++  M   G+ PD  TY   ING      +  AF     M+   
Sbjct: 617 FISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDAS 676

Query: 481 FVPD 484
             P+
Sbjct: 677 CEPN 680



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 253/484 (52%), Gaps = 4/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+   +  A + L  M Q G   +  TY  LI   C+EG +  A +++  M  +G
Sbjct: 166 LIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRG 225

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TYN++I+G CK GR   A  +   M + G +PD  TYN L+   C  E   EAE
Sbjct: 226 VVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLC-GEKPDEAE 284

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  +   RG  P +++F+ +I  + +  ++D AL     M S+    D   Y ++IN  
Sbjct: 285 ELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVL 344

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +     EA +   EM   G   +VV Y +I++G C+   +  A ++F  M   G  P+ 
Sbjct: 345 IKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNA 404

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+++LI+G  +D  ++KA+ L   M +  I P ++TY TLI G CK  E + A +L+  
Sbjct: 405 WTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 464

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    ++P+  +Y +L +  C  G   EA+     +V KG+  T V+  +++ G+ ++G+
Sbjct: 465 MEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGN 521

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   + KMV+EG   DS +Y+ L+    +++ +++A +++ +M   G+  +++ Y +
Sbjct: 522 TDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTI 581

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I++   ++G+   ++ +   MI  G  P  +TYT  I+ +     ++EA     EM + G
Sbjct: 582 IISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 641

Query: 481 FVPD 484
             PD
Sbjct: 642 VAPD 645



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 240/499 (48%), Gaps = 19/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  +ID A      M       D   Y  LIN   ++   +EA + ++ M   G
Sbjct: 305 IINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V  Y S+I+G CK G+   A EV   M   G  P+  TY++L+    + + + +A 
Sbjct: 365 LAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAM 424

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M   G+ P +++++TLI    +  + D A   F  M+  GL PD   Y ++ +  
Sbjct: 425 ALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHAL 484

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G   EA      ++ KG V+  VTY ++++G  +A     A  L  +M+  G   D 
Sbjct: 485 CKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADS 541

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT++ L+   CK   +N+AL++ D MT   +K +IV Y  +I    K G+ + A  ++ +
Sbjct: 542 YTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNE 601

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS    P+  +Y + I+ YC +G + EA  L  EM   G+ P +V+ N  I G    G 
Sbjct: 602 MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGY 661

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREE----------------NMDKAFALVS 404
             +A   L +M+    +P+  +Y  L+  F++                   +D  + L+ 
Sbjct: 662 MDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLE 721

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M   GL P  +TY+ I+ GFC+  R+ ++ ++   M  K ++P+   YT LI       
Sbjct: 722 RMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIK 781

Query: 465 NLKEAFRFHDEMLQRGFVP 483
              +A  F  +M++ GF P
Sbjct: 782 LFGKAVSFVTDMIEFGFQP 800



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 148/471 (31%), Positives = 233/471 (49%), Gaps = 6/471 (1%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           A   L  M   G   +  +Y  LI   C    + EA  L+  M   G    + TY  LI 
Sbjct: 144 ACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIK 203

Query: 74  GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
           GLCK+GR   A+ VL+EM   G+ P   TYN ++   C+   M +A  I   M R G  P
Sbjct: 204 GLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNP 263

Query: 134 DIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
           D  +++ LI G+     + D A     +    G  P  + +T IINGYC+   + +AL++
Sbjct: 264 DDWTYNILIYGLCGE--KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRV 321

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
           +  ML   C +D+  Y  ++N L +     EA +  +EM   G+ P+   +T++I G+CK
Sbjct: 322 KTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCK 381

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            G +  AL +F +M  +  +P+  TY++LI G  +  ++ KA  L   M    I+P  I+
Sbjct: 382 VGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVIT 441

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y  LI G C       AFRL+  M   G+ P   + N +    C+SG A +A  FL   V
Sbjct: 442 YTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---V 498

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            +GV    ++Y +L++GF +  N D A  L+ KM N+G   D  TY+V+L   C+Q +++
Sbjct: 499 RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLN 558

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           ++  IL +M   G+  +   YT +I+  + +     A    +EM+  G  P
Sbjct: 559 EALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 609



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 216/445 (48%), Gaps = 19/445 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  K+ +A      ME +G  P+  TY++LI    ++  L +A  L+  M   G
Sbjct: 375 IIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 434

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + PGV TY +LI G CKK   D A  + + M Q GL+PD   YN L    C+      AE
Sbjct: 435 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKS---GRAE 491

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E +  + R+GV    V++++L+  FS+ G  D A +   +M + G   D+  Y++++   
Sbjct: 492 EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQAL 551

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + EAL + D+M   G   ++V Y  I++ + +      A  +FNEM+  G  P  
Sbjct: 552 CKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSA 611

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T  I  +CK G + +A +L   M +  + PD+VTYN  I+G   +G M++A      
Sbjct: 612 TTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKR 671

Query: 301 MISRKISPNYISYGILINGYCSM----GHVTEAFRLW------------YEMVGKGIKPT 344
           MI     PNY +Y IL+  +  M     H  +   +W              MV  G+ PT
Sbjct: 672 MIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPT 731

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
            V+ ++II G+C++    +A      M  + + P+   Y  LI      +   KA + V+
Sbjct: 732 AVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVT 791

Query: 405 KMENQGLVPDVITYNVILTGFCRQG 429
            M   G  P + +Y+ ++ G C +G
Sbjct: 792 DMIEFGFQPHLESYHYLIVGLCDEG 816



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 218/438 (49%), Gaps = 20/438 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK H+ D+A      MEQ G+ PD   YN L +A C+ G  EEA+  +     KG
Sbjct: 445 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVR---KG 501

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY SL++G  K G  D A  ++++M+  G   D+ TY+ LL   C+++ ++EA 
Sbjct: 502 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEAL 561

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M+  GV  +IV+++ +I    + G+ D A   F EM S+G  P    YT+ I+ Y
Sbjct: 562 SILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSY 621

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  +  EM   G   DVVTYN  +NG      +  A      M++    P++
Sbjct: 622 CKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNY 681

Query: 241 YTF---------TTLIHGHCKDGN-------MNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
           +T+          +L+  H  D +       ++    L + M +  + P  VTY+++I G
Sbjct: 682 WTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAG 741

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           FCK   +E+A  L+  M  + ISPN   Y +LI   C +    +A     +M+  G +P 
Sbjct: 742 FCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPH 801

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVS-EGVDPDSISYNTLINGFVREENMDKAFALV 403
           L S + +I G C  GD  KA      ++  E  + + +++  L +G ++  ++D    L+
Sbjct: 802 LESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLL 861

Query: 404 SKMENQGLVPDVITYNVI 421
           S MEN+    D  TY+++
Sbjct: 862 SAMENRHCQIDSETYSMV 879



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 204/406 (50%), Gaps = 4/406 (0%)

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           G   +A  +L  M  MG   +  +Y  L+   C    + EA  +   M + G + ++ ++
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + LI    + G++  A     EM   G+VP    Y  +I+GYC++G + +AL ++  M  
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            GC  D  TYN ++ GLC  K   EA++L N+ + RG  P   TFT +I+G+CK   ++ 
Sbjct: 259 NGCNPDDWTYNILIYGLCGEKP-DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           AL +   M   + K D+  Y  LI+   K    ++A +  ++M +  ++PN + Y  +I+
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
           GYC +G V  A  ++  M  +G +P   + +++I G  +     KA   ++KM  +G+ P
Sbjct: 378 GYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 437

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
             I+Y TLI G  ++   D AF L   ME  GL PD   YNV+    C+ GR  ++   L
Sbjct: 438 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL 497

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              + KG+   + TYT+L++G     N   A    ++M+  G   D
Sbjct: 498 ---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 540



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 192/394 (48%), Gaps = 5/394 (1%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVSFSTLIGIFSR-NGQLD 152
           G     A++  LL    R+   +  +++   M S    A D+      I    R  G L 
Sbjct: 83  GFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMREAVDAIQAIRRVGGDLR 142

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
           +A      M   G   +   YTI+I G C    V EAL +   M++ GC +++ TY  ++
Sbjct: 143 KACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLI 202

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            GLC+   +  A  +  EM  RGV P  +T+  +I G+CK G M  AL +  +M +    
Sbjct: 203 KGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCN 262

Query: 273 PDIVTYNTLIDGFCKVGEM-EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           PD  TYN LI G C  GE  ++A +L  D I R  +P  I++  +INGYC    + +A R
Sbjct: 263 PDDWTYNILIYGLC--GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALR 320

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +   M+    K  L +   +I    +     +A E +S+M + G+ P+ + Y ++I+G+ 
Sbjct: 321 VKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYC 380

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   +  A  +   ME++G  P+  TY+ ++ G  +  ++H +  ++ +M E G+ P   
Sbjct: 381 KVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVI 440

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           TYTTLI G   ++    AFR  + M Q G  PD+
Sbjct: 441 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 474


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 235/454 (51%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           TY TLINAYC  G +  A Q + S+   GL P  + Y S + G C+ G    A  V   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              G      TY  LL        + EA  +F  M     APD   ++T++      G+ 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           + A +   E  S G  P+ V+Y  +I+GYC  G +  ALK+ + M    C  +V TY  +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++GLC++  +  A  LF+ M+E G+ P+  T+T LI G C +G++  A  L  +M    +
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P+  T++ LID  CK  ++E+A      ++ + +  N + Y  LI+G C  G +  A  
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L  +M+ +G  P   S +++I G CR    S+A   L  M+ +G+    ++Y  +I+  V
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           RE   +    +  KM   G+ PD++TY V +  +C +GRM D+E ++ +M+++G+ P+  
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           TY TLI G+ +   + +AF   + M+ +G+ P++
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 235/465 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C    I +AK  L  +   G+ PD+  Y + +  YCR G L  A ++   M  +G
Sbjct: 78  LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG 137

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                FTY +L++GL   G    A  V   M     +PDT  Y T++   C      EAE
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAE 197

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E    G  P+IV ++ LI  +   G+++ AL  F  M      P+   YT +I+G 
Sbjct: 198 VLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGL 257

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V  A+ +   M+E G   +VVTY  ++ G C    L  A  L + M   G+ P+ 
Sbjct: 258 CKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPND 317

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF+ LI   CK   + +A      + +K +K + V Y +LIDG CK G+++ A++L   
Sbjct: 318 WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQK 377

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS    P+  SY  LI+G C    +++A  +  +M+ KGI+ + V+   II    R   
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           +    +   KM++ G++PD ++Y   +  +  E  M+ A +++ +M ++G+ P+++TYN 
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ++ G+   G +  +      M+ KG  P+  +YT L+   V +++
Sbjct: 498 LIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSS 542



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 226/458 (49%), Gaps = 23/458 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LC+  + + A++ L E    G  P+ V YN LI+ YC  G +E A ++   M G  
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  LI+GLCK G+ +RA  +   M++ GL P+  TY  L+   C + ++  A 
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+ P+  +FS LI    +  +++ A ++   +   G+  + V+YT +I+G 
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++  +M+ +G V D  +Y+++++GLCR K L++A  +  +M+E+G+    
Sbjct: 363 CKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP 422

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I    ++        +FD M    I PDIVTY   +  +C+ G ME A  +   
Sbjct: 423 VTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R + PN ++Y  LI GY ++G V++AF  +  MVGKG KP   S   +++   +   
Sbjct: 483 MVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSS 542

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           +  +           VD   I+            +M     L+  +  + L      Y+ 
Sbjct: 543 SDNS-----------VDIWKIA------------DMKDLQVLLEDITERQLPLAADIYSC 579

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
            +   CR  R+ +++     M    L P    YT++I+
Sbjct: 580 FIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 251/499 (50%), Gaps = 21/499 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K D A   +  M  KG  PDT TY+ +I   C    +E+AF L   M   G+ P 
Sbjct: 263 LCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPD 322

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  LI+  CK G  ++A+   DEM  +G S +  TY  LL    + + + +A +IF 
Sbjct: 323 VYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFN 382

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M   G  P+ +++S L+    + G++ +A                  YF    +  + P
Sbjct: 383 RMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAP 442

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +I+G C+   V++A ++ D ML  GC  + + Y+ +++G C+   +  A ++F
Sbjct: 443 NVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVF 502

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
             M + G  P  +T+T+LI    KD  ++ A+ +   M + S  P++VTY  +IDG C++
Sbjct: 503 LRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRI 562

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           GE +KA KL + M  +  SPN ++Y  LI+G    G V  + +L+ +M  KG  P  V+ 
Sbjct: 563 GECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTY 622

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C +G   +A   LS+M           Y +++ GF ++     +  L+ ++E+
Sbjct: 623 RVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKK--FIASLGLLEELES 680

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE--KGLN-PDRSTYTTLINGHVSQNN 465
            G VP    Y +++  F + GR+ ++  +   M+E    LN   +  YT+LI      + 
Sbjct: 681 HGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQ 740

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           L++AF  + E+ ++G VP+
Sbjct: 741 LEKAFELYSEITRKGVVPE 759



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 218/519 (42%), Gaps = 54/519 (10%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E++  G  P   TYN L+      G ++  F++   MS  G     FT       LCK+G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 80  R-------------------C-------------DRAKEVLDEMLQMGLSPDTATYNTLL 107
           R                   C             D A   L  M      P+  TY TLL
Sbjct: 90  RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
               +K+ +   + I   M + G  P+   F++L+  +        A    + M   G  
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCP 209

Query: 168 PDNVLYTIIINGYC------RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
           P  V Y I I   C          +  A K+ +EML   CV++ V        LC     
Sbjct: 210 PGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 269

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
             A  +   M+ +G  PD  T++ +I   C+   + KA  LF  M    + PD+ TY  L
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           ID FCK G +E+A   + +M S   S N ++Y  L++ Y     + +A  ++  M+  G 
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMV----------------SEGVDPDSISYNT 385
            P  ++ + ++ G C++G+  KA E  +K++                ++ + P+ ++Y  
Sbjct: 390 PPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGA 449

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  +   +  A  L+  M + G  P+ I Y+ ++ GFC+ G++ +++ +  RM + G
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             P   TYT+LI+       L  A +   +M++    P+
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPN 548



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 173/344 (50%), Gaps = 5/344 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK HK+  A+  L  M   G  P+ + Y+ LI+ +C+ G ++ A ++   MS  G
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY SLI+ + K  R D A +VL +M++   +P+  TY  ++   CR     +A 
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKAL 569

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M  +G +P++V+++ LI    ++G++D +L  F +M + G  P+ V Y ++IN  
Sbjct: 570 KLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHC 629

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA  +  EM +      +  Y +++ G   +K    +  L  E+   G  P  
Sbjct: 630 CAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEELESHGTVPIA 687

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT---YNTLIDGFCKVGEMEKANKL 297
             +  LI    K G + +AL L   M + S   +I +   Y +LI   C   ++EKA +L
Sbjct: 688 PVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFEL 747

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           ++++  + + P    +  LI G   +    EA +L Y +  +G+
Sbjct: 748 YSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 170/409 (41%), Gaps = 38/409 (9%)

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL 166
           L  S R+   S +     E+   G  P   +++ L+ + +  GQ+D      +EM  +G 
Sbjct: 12  LRSSLRRACSSSSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGF 71

Query: 167 V--------------------------------PDNVLYTIIINGYCRNGFVLEALKMRD 194
                                             D VL T +I+G        EA+    
Sbjct: 72  CMDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLH 131

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
            M    C+ +VVTY T+L G  + K L     + N M++ G  P+   F +L+H +C   
Sbjct: 132 RMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNAR 191

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK------ANKLWADMISRKISP 308
           +   A  L   M      P  V YN  I   C   E+        A K++ +M++     
Sbjct: 192 DYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVL 251

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N ++        C MG    AF++   M+GKG  P   + + +I   C +    KA    
Sbjct: 252 NKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 311

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M S GV+PD  +Y  LI+ F +   +++A +   +M + G   +V+TY  +L  + + 
Sbjct: 312 QEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKA 371

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
            ++  +  I  RMI+ G  P+  TY+ L++G      +++A   + +++
Sbjct: 372 KQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLI 420


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 261/492 (53%), Gaps = 45/492 (9%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           ++N L+    +     + F L   M   GL P + T N LIN LC   R +     +  +
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           ++ G  PD  T+ TL+   C +  + EA ++F  M + G  P++V++ TLI      G +
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212

Query: 152 DRALMYFREM--KSAGLV----PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           + AL + +EM   ++  V    P+ + Y+III+G C+ G   EA+ + +EM+++G   +V
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNV 272

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT++ +++ LC+   + +A  L   M++ G+ P+ +T+T+LI G C  G++N A  LF  
Sbjct: 273 VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVS 332

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI-------- 317
           M  K  +PD+++YN LI+G+CK  ++E+A KL+ +M+   + P+  + G+L+        
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 318 ---------------------------NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
                                      +G C  G++ EA +L+ E+    +K  + +   
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I G C++G    A E   K+  EG+ PD+++Y+++I+GF ++  +DKA  L  KME  G
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
             PD+ITY++++ GF    ++     +L RMIEK + PD   Y  ++   V ++   E +
Sbjct: 513 CSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIY-AIVEDMVCKD---EKY 568

Query: 471 RFHDEMLQRGFV 482
           +   ++LQR FV
Sbjct: 569 KEWLDLLQRFFV 580



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 232/464 (50%), Gaps = 41/464 (8%)

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            +F++N L+ GL K     +   +  +M   GL PD  T N L+   C    ++E     
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
             + RRG  PD+V+F+TLI       ++  A   F  M+  G  P+ V Y  +I G C  
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 184 GFVLEALKMRDEMLEK------GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           G +  ALK   EML         C  +V++Y+ I++GLC+     EA  LFNEM+++GV 
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  TF+ LI   CK+G + KA  L ++M Q  I P++ TY +LI GFC VG++  A +L
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP-------------- 343
           +  M S+   P+ ISY +LINGYC    V EA +L+ EM+  G+ P              
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389

Query: 344 ---------------------TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
                                 L  C   + G C++G   +A +  +++ S  +  D  +
Sbjct: 390 AGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIET 449

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           +  LI+G  +   ++ A+ L  K+  +G+ PD + Y+ ++ GFC++G++  + ++  +M 
Sbjct: 450 FGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKME 509

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           E G +PD  TY+ L+ G    N L++  +    M+++   PDD 
Sbjct: 510 ENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDG 553



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 226/433 (52%), Gaps = 6/433 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC  ++I+     +  + ++G  PD VT+ TLI   C E  + EA +L   M   G
Sbjct: 132 LINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLG 191

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ------MGLSPDTATYNTLLVESCRKE 114
             P V TY +LI GLC  G  + A +   EML           P+  +Y+ ++   C+  
Sbjct: 192 CTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVG 251

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           N  EA  +F EM  +GV P++V+FS LI +  + GQ+ +A      M   G+VP+   YT
Sbjct: 252 NWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYT 311

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I G+C  G +  A ++   M  KG   DV++YN ++NG C+   + EA  LFNEML  
Sbjct: 312 SLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHV 371

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G++PD  T   L+      G ++ A  LF ++   ++  D+      +DG CK G + +A
Sbjct: 372 GMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEA 431

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            KL+ ++ S  +  +  ++G LI+G C  G +  A+ L+ ++  +GI+P  ++ +++I G
Sbjct: 432 MKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHG 491

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           +C+ G   KA+    KM   G  PD I+Y+ L+ GF     ++K   L+ +M  + + PD
Sbjct: 492 FCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPD 551

Query: 415 VITYNVILTGFCR 427
              Y ++    C+
Sbjct: 552 DGIYAIVEDMVCK 564



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 215/411 (52%), Gaps = 6/411 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           ++  LC +H+I  A      M++ G  P+ VTY TLI   C  G +  A +    M    
Sbjct: 167 LIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDT 226

Query: 60  -----GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
                  +P V +Y+ +I+GLCK G  + A  + +EM+  G+ P+  T++ L+   C++ 
Sbjct: 227 SPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEG 286

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            + +A+++   M + G+ P++ ++++LI  F   G L+ A   F  M S G  PD + Y 
Sbjct: 287 QVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYN 346

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           ++INGYC+   V EA+K+ +EML  G   DV T   +L  L  A  + +A +LF  +   
Sbjct: 347 MLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPY 406

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            +  D       + G CK+G + +A+ LF+ +   ++K DI T+  LIDG CK G++E A
Sbjct: 407 AMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETA 466

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L+  +    I P+ ++Y  +I+G+C  G V +A  L+ +M   G  P L++ + +++G
Sbjct: 467 WELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRG 526

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           +  S    K  + L +M+ + V PD   Y  + +   ++E   +   L+ +
Sbjct: 527 FYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQR 577



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 206/392 (52%), Gaps = 18/392 (4%)

Query: 97  SPDTATYN---TLLVESCRKENMS--EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           SP+  ++     + +  C+  ++S  +A + F  M R      I SF+ L+   ++    
Sbjct: 53  SPERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHY 107

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
            +    +++M  AGL PD +   I+IN  C    + E L     ++ +G + DVVT+ T+
Sbjct: 108 SQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTL 167

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS- 270
           + GLC    + EA  LF  M + G  P+  T+ TLI G C  GN+N AL     M   + 
Sbjct: 168 IKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTS 227

Query: 271 -----IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                 +P++++Y+ +IDG CKVG  E+A  L+ +M+ + + PN +++ +LI+  C  G 
Sbjct: 228 PYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQ 287

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A +L   M+  GI P L +  ++IKG+C  GD + A E    M S+G +PD ISYN 
Sbjct: 288 VIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNM 347

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LING+ +   +++A  L ++M + G+ PDV T  V+L      G++ D++  L+R+I+  
Sbjct: 348 LINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKE-LFRVIKPY 406

Query: 446 LNP-DRSTYTTLINGHVSQNNLKEAFRFHDEM 476
             P D       ++G      + EA +  +E+
Sbjct: 407 AMPKDLCICCIFLDGLCKNGYIFEAMKLFNEL 438


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 235/454 (51%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           TY TLINAYC  G +  A Q + S+   GL P  + Y S + G C+ G    A  V   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              G      TY  LL        + EA  +F  M     APD   ++T++      G+ 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           + A +   E  S G  P+ V+Y  +I+GYC  G +  ALK+ + M    C  +V TY  +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++GLC++  +  A  LF+ M+E G+ P+  T+T LI G C +G++  A  L  +M    +
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P+  T++ LID  CK  ++E+A      ++ + +  N + Y  LI+G C  G +  A  
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L  +M+ +G  P   S +++I G CR    S+A   L  M+ +G+    ++Y  +I+  V
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           RE   +    +  KM   G+ PD++TY V +  +C +GRM D+E ++ +M+++G+ P+  
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           TY TLI G+ +   + +AF   + M+ +G+ P++
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 250/536 (46%), Gaps = 51/536 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LC+  + + A++ L E    G  P+ V YN LI+ YC  G +E A ++   M G  
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  LI+GLCK G+ +RA  +   M++ GL P+  TY  L+   C + ++  A 
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+ P+  +FS LI    +  +++ A ++   +   G+  + V+YT +I+G 
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++  +M+ +G V D  +Y+++++GLCR K L++A  +  +M+E+G+    
Sbjct: 363 CKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP 422

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I    ++        +FD M    I PDIVTY   +  +C+ G ME A  +   
Sbjct: 423 VTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT---------------- 344
           M+ R + PN ++Y  LI GY ++G V++AF  +  MVGKG KP                 
Sbjct: 483 MVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSS 542

Query: 345 ---------------------------------LVSCNTIIKGYCRSGDASKADEFLSKM 371
                                            + SC   I+  CR     +A  F   M
Sbjct: 543 SDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSC--FIRCLCRVDRLEEAKHFFMGM 600

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            +  + P    Y ++I+   R + +  A  L+  M   G +P + +Y +I++  C  G  
Sbjct: 601 QNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNF 660

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
             ++ +   ++ K  N D   +  LI G + + ++ E       M + G+ P +  
Sbjct: 661 RTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTI 716



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 235/465 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C    I +AK  L  +   G+ PD+  Y + +  YCR G L  A ++   M  +G
Sbjct: 78  LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG 137

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                FTY +L++GL   G    A  V   M     +PDT  Y T++   C      EAE
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAE 197

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E    G  P+IV ++ LI  +   G+++ AL  F  M      P+   YT +I+G 
Sbjct: 198 VLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGL 257

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V  A+ +   M+E G   +VVTY  ++ G C    L  A  L + M   G+ P+ 
Sbjct: 258 CKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPND 317

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF+ LI   CK   + +A      + +K +K + V Y +LIDG CK G+++ A++L   
Sbjct: 318 WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQK 377

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS    P+  SY  LI+G C    +++A  +  +M+ KGI+ + V+   II    R   
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           +    +   KM++ G++PD ++Y   +  +  E  M+ A +++ +M ++G+ P+++TYN 
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ++ G+   G +  +      M+ KG  P+  +YT L+   V +++
Sbjct: 498 LIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSS 542



 Score =  227 bits (579), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 239/475 (50%), Gaps = 12/475 (2%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M      PDT  Y T+++  C  G  EEA  L+      G +P +  YN+LI+G C  G 
Sbjct: 168 MRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE 227

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A +V + M     SP+  TY  L+   C+   +  A  +F  M   G+ P++V+++ 
Sbjct: 228 MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA 287

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI      G L  A      M++ GLVP++  ++++I+  C+   V EA      +++KG
Sbjct: 288 LIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKG 347

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
             ++ V Y ++++GLC+   +  AD+L  +M+  G  PD +++++LI G C+   +++A 
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            + + M +K I+   VTY  +ID   +    E   K++  MI+  I+P+ ++Y + +  Y
Sbjct: 408 LMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSY 467

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + +A  +  +MV +G+ P LV+ NT+I+GY   G  S+A      MV +G  P+ 
Sbjct: 468 CEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527

Query: 381 ISYNTLINGFVREENMDKAFAL--VSKMEN-QGLVPDVI---------TYNVILTGFCRQ 428
            SY  L+   V++ + D +  +  ++ M++ Q L+ D+           Y+  +   CR 
Sbjct: 528 DSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRV 587

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            R+ +++     M    L P    YT++I+       L +A    D M + G++P
Sbjct: 588 DRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLP 642



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 204/477 (42%), Gaps = 83/477 (17%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  K++ A +    M + G+ P+ VTY  LI   C EG L+ AF+L++ M   G
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312

Query: 61  LKPGVFT-----------------------------------YNSLINGLCKKGRCDRAK 85
           L P  +T                                   Y SLI+GLCK G+ D A 
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           E++ +M+  G  PD  +Y++L+   CR++ +S+A  +  +M  +G+    V+++ +I   
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R    +     F +M + G+ PD V YT+ +  YC  G + +A  M  +M+++G   ++
Sbjct: 433 VREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNL 492

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFP--DFYT--------------------- 242
           VTYNT++ G     ++++A   F  M+ +G  P  D YT                     
Sbjct: 493 VTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKI 552

Query: 243 ------------------------FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
                                   ++  I   C+   + +A + F  M   ++ P    Y
Sbjct: 553 ADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVY 612

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            ++ID  C++  +  A  L   M      P+  SY I+I+  C  G+   A  ++ +++ 
Sbjct: 613 TSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLL 672

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           K      +    +I G  + G  ++    LS M   G  P S + N +I G +   N
Sbjct: 673 KESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQP-SNTINAMITGEITVTN 728


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 235/454 (51%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           TY TLINAYC  G +  A Q + S+   GL P  + Y S + G C+ G    A  V   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              G      TY  LL        + EA  +F  M     APD   ++T++      G+ 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           + A +   E  S G  P+ V+Y  +I+GYC  G +  ALK+ + M    C  +V TY  +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++GLC++  +  A  LF+ M+E G+ P+  T+T LI G C +G++  A  L  +M    +
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P+  T++ LID  CK  ++E+A      ++ + +  N + Y  LI+G C  G +  A  
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L  +M+ +G  P   S +++I G CR    S+A   L  M+ +G+    ++Y  +I+  V
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           RE   +    +  KM   G+ PD++TY V +  +C +GRM D+E ++ +M+++G+ P+  
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           TY TLI G+ +   + +AF   + M+ +G+ P++
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 231/457 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA C    I +AK  L  +   G+ PD+  Y + +  YCR G L  A ++   M  +G
Sbjct: 78  LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG 137

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                FTY +L++GL   G    A  V   M     +PDT  Y T++   C      EAE
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAE 197

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E    G  P+IV ++ LI  +   G+++ AL  F  M      P+   YT +I+G 
Sbjct: 198 VLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGL 257

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V  A+ +   M+E G   +VVTY  ++ G C    L  A  L + M   G+ P+ 
Sbjct: 258 CKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPND 317

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +TF+ LI   CK   + +A      + +K +K + V Y +LIDG CK G+++ A++L   
Sbjct: 318 WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQK 377

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MIS    P+  SY  LI+G C    +++A  +  +M+ KGI+ + V+   II    R   
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           +    +   KM++ G++PD ++Y   +  +  E  M+ A +++ +M ++G+ P+++TYN 
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           ++ G+   G +  +      M+ KG  P+  +YT L+
Sbjct: 498 LIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 227/428 (53%), Gaps = 6/428 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LC+  + + A++ L E    G  P+ V YN LI+ YC  G +E A ++   M G  
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  LI+GLCK G+ +RA  +   M++ GL P+  TY  L+   C + ++  A 
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G+ P+  +FS LI    +  +++ A ++   +   G+  + V+YT +I+G 
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A ++  +M+ +G V D  +Y+++++GLCR K L++A  +  +M+E+G+    
Sbjct: 363 CKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP 422

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I    ++        +FD M    I PDIVTY   +  +C+ G ME A  +   
Sbjct: 423 VTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R + PN ++Y  LI GY ++G V++AF  +  MVGKG KP   S   +++   +   
Sbjct: 483 MVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSS 542

Query: 361 ASKADEFLS----KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           +  + +       K + E  + D I +  LI G +++ ++ +  +L+S M+  G  P   
Sbjct: 543 SDNSVDIWKIADMKDLQES-NYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSN- 600

Query: 417 TYNVILTG 424
           T N ++TG
Sbjct: 601 TINAMITG 608



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 238/468 (50%), Gaps = 4/468 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L     +  A      M      PDT  Y T+++  C  G  EEA  L+      G
Sbjct: 148 LLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNG 207

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P +  YN+LI+G C  G  + A +V + M     SP+  TY  L+   C+   +  A 
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M   G+ P++V+++ LI      G L  A      M++ GLVP++  ++++I+  
Sbjct: 268 VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA      +++KG  ++ V Y ++++GLC+   +  AD+L  +M+  G  PD 
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++++LI G C+   +++A  + + M +K I+   VTY  +ID   +    E   K++  
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI+  I+P+ ++Y + +  YC  G + +A  +  +MV +G+ P LV+ NT+I+GY   G 
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL--VSKMEN-QGLVPDVIT 417
            S+A      MV +G  P+  SY  L+   V++ + D +  +  ++ M++ Q    D I 
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIV 567

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           + +++ G  ++G + +   +L  M E G  P  +T   +I G ++  N
Sbjct: 568 WKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTINAMITGEITVTN 614


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 258/478 (53%), Gaps = 6/478 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+++  K   ++       EM+++ +    VTYN LIN + + G +EEA +    M   G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                +++N LI G CK+G  D A  V DEML  G+ P T+TYN  +   C    + +A 
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M+    APD+VS++TL+  + + G+   A + F ++++  + P  V Y  +I+G 
Sbjct: 364 ELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G +  A ++++EM  +    DV+TY T++ G  +   L+ A ++++EML +G+ PD 
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK-PDIVTYNTLIDGFCKVGEMEKANKLWA 299
           Y +TT   G  + G+ +KA  L + M       PD+  YN  IDG CKVG + KA +   
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    + P++++Y  +I GY   G    A  L+ EM+ K + P++++   +I G+ ++G
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A ++ ++M   GV P+ +++N L+ G  +  N+D+A+  + KME +G+ P+  +Y 
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           ++++  C   +  +   +   M++K + PD  T+  L   H+ +++      F + +L
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK-HLEKDHESREVEFLERLL 716



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 252/465 (54%), Gaps = 5/465 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G+ P  +T+NT++++  + G LE   ++   M  + ++    TYN LING  K G+
Sbjct: 229 MIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGK 288

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A+    +M + G +    ++N L+   C++    +A  +  EM   G+ P   +++ 
Sbjct: 289 MEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNI 348

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I      G++D A    RE+ S+   PD V Y  +++GY + G  +EA  + D++    
Sbjct: 349 YICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD 404

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
               +VTYNT+++GLC +  L  A  L  EM  + +FPD  T+TTL+ G  K+GN++ A 
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMAT 464

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILING 319
            ++D M +K IKPD   Y T   G  ++G+ +KA +L  +M++    +P+   Y + I+G
Sbjct: 465 EVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDG 524

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G++ +A     ++   G+ P  V+  T+I+GY  +G    A     +M+ + + P 
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y  LI G  +   +++AF   ++M+ +G+ P+V+T+N +L G C+ G + ++   L 
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +M E+G+ P++ +YT LI+ +      +E  + + EML +   PD
Sbjct: 645 KMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/447 (31%), Positives = 229/447 (51%), Gaps = 5/447 (1%)

Query: 39  AYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSP 98
            Y ++   E+       M  KG  P V   N ++  L      ++A  V + M++ G+ P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
              T+NT+L    +  ++   ++I+ EM RR +    V+++ LI  FS+NG+++ A  + 
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
            +M+ +G       +  +I GYC+ G   +A  + DEML  G      TYN  +  LC  
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
             + +A +L + M      PD  ++ TL+HG+ K G   +A  LFD +    I P IVTY
Sbjct: 357 GRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           NTLIDG C+ G +E A +L  +M ++ I P+ I+Y  L+ G+   G+++ A  ++ EM+ 
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDSISYNTLINGFVREENMD 397
           KGIKP   +  T   G  R GD+ KA     +MV ++   PD   YN  I+G  +  N+ 
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           KA     K+   GLVPD +TY  ++ G+   G+   +  +   M+ K L P   TY  LI
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GH     L++AF++  EM +RG  P+
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPN 619


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 250/507 (49%), Gaps = 51/507 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ ++D A+  L    ++G  PD   Y+ LI +YC+ G L  A     +M   G
Sbjct: 300 VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHG 359

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++      + L+    K G    A     +    GL  D   YN  +   C+  NM+EA 
Sbjct: 360 IETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 419

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G+ PD + ++ LI  +   G++  A   F EM  A + PD V Y I+ +G+
Sbjct: 420 KLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGF 479

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV---- 236
           C++G V+E   + D M ++G   + +TY   + G CR   L+EA+ LFN + E+G+    
Sbjct: 480 CKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIE 539

Query: 237 -------------------------------FPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                            D ++ + LI+  C+ GN+  A N+  I
Sbjct: 540 VMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKI 599

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +  + PD+++Y+ LI  +C+ G+M+KA+  + DM+ R +S + I Y IL+NGYC  G 
Sbjct: 600 MLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGR 659

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS-------GDASKADEFL---------S 369
           + EA +L+ +M   GIKP +++   ++ G+ +        G A +   FL         S
Sbjct: 660 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 719

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M    ++PD   Y  LI+G  + E + +A  L  +M  +GL PD   Y  ++ G+C QG
Sbjct: 720 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 779

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTL 456
            +  +E +L  MI+KG+ PD  T++ L
Sbjct: 780 EISKAEDLLQEMIDKGIEPDELTFSVL 806



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 275/534 (51%), Gaps = 53/534 (9%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
            LC   K D A + L E+ ++ V  + + YN +++  C+E  L+EA +L+ + + +G  P
Sbjct: 268 GLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNP 327

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-SEAEEI 122
            V+ Y+ LI   CK G    A +  + M+  G+  +    + LL +  RK  M SEA   
Sbjct: 328 DVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLL-QCFRKLGMTSEAIAY 386

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           F +    G+  D V ++  +  + +NG ++ A+    EMK  GL PD + YT +I+GYC 
Sbjct: 387 FLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCL 446

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G +  A ++ +EML+     D+VTYN + +G C++ ++ E  DL + M ++G+ P+  T
Sbjct: 447 KGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLT 506

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF----------------- 285
           +   I G C+ GN+++A  LF+++ +K I    V Y++++ G+                 
Sbjct: 507 YGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVA 566

Query: 286 ------------------CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
                             C+VG ++ A+ +   M+   + P+ ISY  LI+ YC  G + 
Sbjct: 567 RQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMD 626

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A   +++MV +G+   ++    ++ GYC++G   +A +   +M + G+ PD I+Y  L+
Sbjct: 627 KAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLL 686

Query: 388 NGFVRE------ENMDK---AF-------ALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           +G ++E      E + K   +F        L+S M++  + PDV  Y V++ G C+   +
Sbjct: 687 DGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYL 746

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            ++  +   M++KGL PD   YT LING+ SQ  + +A     EM+ +G  PD+
Sbjct: 747 VEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDE 800



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 241/465 (51%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM+   + PD  T+  +  +  +   ++EA Q+   M+  G+KP    Y+S + GLC  G
Sbjct: 214 EMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCG 273

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + D A  +L E+ +  +  +   YN ++   C++  + EAE++    +R+G  PD+  +S
Sbjct: 274 KYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYS 333

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI  + + G L  A+ ++  M S G+  +  + + ++  + + G   EA+    +  + 
Sbjct: 334 YLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDS 393

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G  +D V YN  ++  C+   + EA  L NEM   G+ PD   +T LI G+C  G M  A
Sbjct: 394 GLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNA 453

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             +F+ M + +I+PDIVTYN L  GFCK G + +   L   M  + + PN ++YGI I G
Sbjct: 454 QQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVG 513

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C  G+++EA  L+  +  KGI    V  ++++ GY  SG    A     ++  +G   D
Sbjct: 514 FCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVD 573

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
             S + LIN   R  N+  A  +   M    +VPDVI+Y+ +++ +C+ G M  + L   
Sbjct: 574 HFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFH 633

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M+++GL+ D   YT L+NG+     L+EA +   +M   G  PD
Sbjct: 634 DMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPD 678



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 221/411 (53%), Gaps = 16/411 (3%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++  CK+  ++ A   L EM+  G+ PD + Y  LI+ YC +G ++ A Q+   M    +
Sbjct: 406 MDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANI 465

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P + TYN L +G CK G      ++LD M   GL P++ TY   +V  CR  N+SEAE 
Sbjct: 466 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEV 525

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F  +  +G+    V +S+++  +  +G  D A M F  +   G + D+   + +IN  C
Sbjct: 526 LFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLC 585

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R G V  A  +   MLE   V DV++Y+ +++  C+   + +A   F++M++RG+  D  
Sbjct: 586 RVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVI 645

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK---------VGEME 292
            +T L++G+CK G + +A  LF  MT   IKPD++ Y  L+DG  K         + +  
Sbjct: 646 VYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKER 705

Query: 293 KA-------NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           ++       NKL + M   +I P+   Y +LI+G C   ++ EA  L+ EM+ KG+ P  
Sbjct: 706 RSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDA 765

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
            +   +I GYC  G+ SKA++ L +M+ +G++PD ++++ L    +R   +
Sbjct: 766 YAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKI 816



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 212/425 (49%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P V+T+N L+  + + G  +      +EM    L+PD  T+  +     + + + EA
Sbjct: 184 GVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEA 243

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++ EM+  GV PD   +S+ +      G+ D A +  +E+    +  + + Y ++++G
Sbjct: 244 LQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDG 303

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+   + EA K+ +    +G   DV  Y+ ++   C+   L  A D +  M+  G+  +
Sbjct: 304 LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETN 363

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +  + L+    K G  ++A+  F       +  D V YN  +D +CK G M +A KL  
Sbjct: 364 CHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLN 423

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M    ++P+ I Y  LI+GYC  G +  A +++ EM+   I+P +V+ N +  G+C+SG
Sbjct: 424 EMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSG 483

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +  + L +M  +G++P+S++Y   I GF R  N+ +A  L + +E +G+    + Y+
Sbjct: 484 LVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYS 543

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+   G    + ++  R+  +G   D  + + LIN      N++ A      ML+ 
Sbjct: 544 SMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEH 603

Query: 480 GFVPD 484
             VPD
Sbjct: 604 DVVPD 608


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 251/484 (51%), Gaps = 5/484 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL +++ + +  +    M + GV P+  TYN L+ A C+   +  A ++++ M+ KG
Sbjct: 140 LIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKG 199

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY ++++ LC  GR D A EVL         P  A+YN +++  CR+  M E  
Sbjct: 200 CPPDDVTYGTIVSALCTLGRVDEATEVLS-----AAPPVAASYNAVILALCREFRMQEVF 254

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  RG+ P++++++T++  F + G+L  A      M   G  P+   +T ++ G 
Sbjct: 255 AVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGL 314

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G V +AL M   M+ +G     V+YN ++ GLC    L  A  + N+M + G FP+ 
Sbjct: 315 FNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNA 374

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TLI G  K G+++ A+++++ MT+   KP++V Y  ++  FCK     +A  L   
Sbjct: 375 RTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDK 434

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     PN +++  LI   C+   V  A  +++EM   G  P   + N ++ G  R G+
Sbjct: 435 MLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGN 494

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A + + +M + G++   ++YNT+++G  +     +A   V +M  +G+ PD  T+  
Sbjct: 495 CGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTA 554

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+  +C++G +  +  IL  M       +   YT L+    +Q+ L++A  +  +ML  G
Sbjct: 555 IIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEG 614

Query: 481 FVPD 484
             P+
Sbjct: 615 IYPN 618



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 246/459 (53%), Gaps = 5/459 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V ALC++H++ +A+  L EM  KG  PD VTY T+++A C  G ++EA +++++     
Sbjct: 175 LVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAA---- 230

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   +YN++I  LC++ R      V+ +M+  GL P+  TY T++   C+   +  A 
Sbjct: 231 -PPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMAC 289

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   G  P++ +F+ L+G    +G++  AL  ++ M + G  P  V Y ++I G 
Sbjct: 290 AILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGL 349

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  A  + ++M + GC  +  TY+T+++G  +A  L  A  ++N+M   G  P+ 
Sbjct: 350 CSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNV 409

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T ++   CK    N+A +L D M  ++  P+ VT+NTLI   C    + +A  ++ +
Sbjct: 410 VVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHE 469

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y  L++G    G+  +A ++  EM   GI+ +LV+ NT++ G C+   
Sbjct: 470 MRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRM 529

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A  F+ +M+  G+ PD+ ++  +I+ + +E  +  A  ++  M       +++ Y +
Sbjct: 530 GREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTI 589

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           ++   C Q ++ D+ + L +M+ +G+ P+  T+  L+ G
Sbjct: 590 LMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRG 628



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 218/437 (49%), Gaps = 5/437 (1%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           YN LI+A  RE  +     +  +M   G++P VFTYN L+  LC+  R   A+++LDEM 
Sbjct: 137 YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
             G  PD  TY T++   C    + EA E+          P   S++ +I    R  ++ 
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEATEVL-----SAAPPVAASYNAVILALCREFRMQ 251

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
                  +M   GL P+ + YT I+N +C+ G +  A  +   M+  GC  +V T+  ++
Sbjct: 252 EVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALV 311

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
            GL     + +A D++  M+  G  P   ++  LI G C  G++  A ++ + M Q    
Sbjct: 312 GGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCF 371

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+  TY+TLIDGF K G+++ A  +W DM      PN + Y  ++  +C      +A  L
Sbjct: 372 PNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESL 431

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             +M+ +   P  V+ NT+I+  C      +A     +M   G  P+  +YN L++G  R
Sbjct: 432 IDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFR 491

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           E N   A  +V +M+N G+   ++TYN +++G C+     ++   + RMI +G+ PD  T
Sbjct: 492 EGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFT 551

Query: 453 YTTLINGHVSQNNLKEA 469
           +T +I+ +  +  ++ A
Sbjct: 552 FTAIIHAYCKEGEVRMA 568



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 183/393 (46%), Gaps = 33/393 (8%)

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNV--LYTIIINGYC 181
           EM  RGV     +    +G F+R G  DRAL  ++R +   G        LY  +I+   
Sbjct: 86  EMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDALL 145

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R   V     +   M + G   +V TYN ++  LC+   +  A  + +EM  +G  PD  
Sbjct: 146 RENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDV 205

Query: 242 TFTTLIHGHCKDGNMNKALNLFDI------------------------------MTQKSI 271
           T+ T++   C  G +++A  +                                 M  + +
Sbjct: 206 TYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGL 265

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           +P+++TY T+++ FCK GE+  A  + A M+    +PN  ++  L+ G  + G V +A  
Sbjct: 266 QPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALD 325

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           +W  MV +G  P+ VS N +I+G C  GD   A   L+ M   G  P++ +Y+TLI+GF 
Sbjct: 326 MWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFS 385

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +  ++D A ++ + M   G  P+V+ Y  ++  FC++   + +E ++ +M+ +   P+  
Sbjct: 386 KAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTV 445

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           T+ TLI    +   +  A     EM + G  P+
Sbjct: 446 TFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPN 478



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 12/210 (5%)

Query: 282 IDGFCKVGEMEKANKLWADMI-----SRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           +  F + G  ++A K +   +     +R  +P    Y  LI+       V     +   M
Sbjct: 103 VGAFARAGAPDRALKTFYRAVHDLGCARPTAPRL--YNHLIDALLRENMVGAVALVCGNM 160

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
              G++P + + N +++  C++     A + L +M ++G  PD ++Y T+++       +
Sbjct: 161 RKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRV 220

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           D+A  ++S        P   +YN ++   CR+ RM +   ++  M+ +GL P+  TYTT+
Sbjct: 221 DEATEVLSAAP-----PVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTI 275

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +N       L+ A      M+  G  P+ A
Sbjct: 276 VNAFCKAGELRMACAILARMVITGCTPNVA 305


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 231/428 (53%), Gaps = 1/428 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  + V P   T+NT+ + + + G LE+  ++   M   G       Y  LI+ LCK G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A ++L  M           Y+T++   C+   + EA E+  +M+R    PD +++  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           ++    +  ++D AL    EM + G+ PD  +Y  +++G C+   V EA  + ++M+++ 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              +VVTYNT++NGLC+A  +  A +LF EM  +G  P   ++ TLI G CK  ++  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           ++FD M + +  P++VTY TLIDG  K G+++ A ++   M+ + ++PN  +Y  LI+G+
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +  V EA +L  +MV +GI PT+V+ N ++   CR+     A +    M      P  
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YNTL+      + +D A  L ++M  +G  PD ITY+ +  G  R G++H+++ ++ +
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 441 MIEKGLNP 448
           M     NP
Sbjct: 420 MKLTKRNP 427



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 225/407 (55%), Gaps = 1/407 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + +   K  +++  K     M + G       Y  LI+  C+ G  +EA++L+++M  K 
Sbjct: 16  VADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKR 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            K     Y+++IN LCK  R + A+E++++M +    PD  TY  ++   C+ + + +A 
Sbjct: 76  FKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDAL 134

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               EM+ RG+ PD   ++ ++    +  +++ A + F +M    + P+ V Y  +ING 
Sbjct: 135 ATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGL 194

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   +  A ++  EM  KG V   V+YNT+++G C+ K L  A D+F++M+     P+ 
Sbjct: 195 CKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNV 254

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI G  K G +  A  + D M +K + P++ TY+ LIDGFCKV  +++A+KL   
Sbjct: 255 VTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQ 314

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+++ I+P  ++Y IL+N  C    + +AF+L+  M  +   PT+V+ NT+++  C    
Sbjct: 315 MVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 374

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
              A    ++M+++G  PD+I+Y+TL  G  R   + +A  L+ KM+
Sbjct: 375 LDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 215/421 (51%), Gaps = 1/421 (0%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M+ + + PG  T+N++ +G  K GR ++ KEV   M++ G +   + Y  L+   C+  N
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
             EA ++   M  +      +++ST+I    +  +++ A     +M      PD + Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           I+   C+   + +AL   +EM  +G   D   YN +L+GLC+ + + EA  LF +M+++ 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
           + P+  T+ TLI+G CK   +  A  LF  M  K   P  V+YNTLIDGFCK  ++  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            ++  M+     PN ++Y  LI+G    G V  A  +   MV KG+ P + + + +I G+
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+     +A + L +MV++G+ P  ++YN L+N   R + ++ AF L   M  +   P V
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           +TYN +L   C   ++  +  +   MI KG  PD  TY TL  G      + EA    ++
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 476 M 476
           M
Sbjct: 420 M 420



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 198/387 (51%), Gaps = 1/387 (0%)

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
           P  AT+NT+     +   + + +E++  M   G       +  LI    + G  D A   
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
              M+        + Y+ IIN  C+   V EA ++ ++M  +    D +TY  I+  LC+
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCK 126

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
            K + +A     EM  RG+ PD + +  ++ G C++  + +A  LF+ M ++ I P++VT
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           YNTLI+G CK   +E A +L+ +M  +   P  +SY  LI+G+C    +  A  ++ +MV
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
                P +V+  T+I G  +SG    A E L  MV +GV P+  +Y+ LI+GF +   +D
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           +A  L+ +M  QG+ P V+TYN++L   CR  ++ D+  +   M ++  +P   TY TL+
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                   L  A R + EM+ +G  PD
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPD 393



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 172/308 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCK  +ID A   + EM  +G+ PD   YN +++  C+E  +EEA  L   M  + 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LINGLCK  R + A E+  EM   G  P   +YNTL+   C+K+++  A+
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M R    P++V+++TLI   S++G++  A      M   G+ P+   Y+ +I+G+
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA K+ ++M+ +G    VVTYN +LN LCRA  L +A  LF  M +R   P  
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TL+   C    ++ A  L+  M  K   PD +TY+TL  G  + G++ +A +L   
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 301 MISRKISP 308
           M   K +P
Sbjct: 420 MKLTKRNP 427



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 147/282 (52%), Gaps = 1/282 (0%)

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             T+NT+ +G  +A  L +  +++  M+E G       +  LI   CK GN ++A  L  
Sbjct: 10  AATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLH 69

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K  K   + Y+T+I+  CK+  +E+A +L   M +R   P+ ++YG ++   C   
Sbjct: 70  TMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCKTK 128

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + +A     EM  +GIKP     N ++ G C+     +A     KMV + ++P+ ++YN
Sbjct: 129 RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYN 188

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLING  +   ++ A+ L  +M  +G VP  ++YN ++ GFC++  +  ++ +  +M+  
Sbjct: 189 TLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
              P+  TYTTLI+G      ++ A    D M+++G  P+ A
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 290



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 2/117 (1%)

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M    V P + ++NT+ +GF +   +++   +   M   G       Y ++++  C+ G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
             ++  +L  M  K        Y+T+IN     N ++EA    ++M +  + P DA 
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR--YAPPDAL 115


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 137/387 (35%), Positives = 223/387 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +++ AK  + EM  KG+ P+ VTYNTL+NAY +    E   +++  M    
Sbjct: 221 VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDK 280

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +     TY  LI      G+   A++V ++ML+ G+  D   + +++   C+  NM  A 
Sbjct: 281 VVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAF 340

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E++ RG+  +  ++  LI     +GQLD A M   EM+S GL  + V++  +INGY
Sbjct: 341 ALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGY 400

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EAL+M+D M +KG   D+ TYNTI  GLC+     EA      M+E+GV P+ 
Sbjct: 401 CKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNA 460

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            +FT +I  HCK+GN+ +A  +F  M +K  KP++VTYNTLIDG+ K G++++A +L  +
Sbjct: 461 VSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDE 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  ++ +  +Y  L++G C  G V EA  L  E+  KG+  ++V+   II G  + G 
Sbjct: 521 MESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGR 580

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLI 387
           + +A     +M++ G+ PD   Y +L+
Sbjct: 581 SEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 225/393 (57%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V++   +I+GLCKKGR +RAK+++ EM   G+ P+  TYNTL+    +  +     E+  
Sbjct: 215 VYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLR 274

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            M    V  +  +++ LI  +  +G++  A   F +M   G+  D  ++T II+  C+ G
Sbjct: 275 LMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLG 334

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            +  A  + DE+ E+G V +  TY  +++G C +  L  A+ L NEM  +G+  +   F 
Sbjct: 335 NMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFN 394

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TLI+G+CK G +++AL + D+M +K  + DI TYNT+  G CK+   E+A +    M+ +
Sbjct: 395 TLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEK 454

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN +S+ I+I+ +C  G++ EA R++ +M  KG KP +V+ NT+I GY + G   +A
Sbjct: 455 GVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEA 514

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
                +M S G+  D  +Y TL++G      +++A  L++++  +GL   ++TY  I++G
Sbjct: 515 YRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISG 574

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
             ++GR  ++  +   M+  GL PD   YT+L+
Sbjct: 575 LSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 240/453 (52%), Gaps = 6/453 (1%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM- 94
           L   Y      EE F++ + M   GLK       S I  L    R D+    L    +M 
Sbjct: 151 LFRVYVDNSMFEEGFKVFDYMVHNGLK---IDDRSCIVCLLALKRSDQMVMSLGFFKKMV 207

Query: 95  GLSPDTATYN-TLLVES-CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
               D   Y+ T++++  C+K  +  A+++  EM+ +G+ P++V+++TL+  + +    +
Sbjct: 208 EFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFE 267

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
                 R M+   +V +   YT++I  Y  +G + EA K+ ++MLE+G   D+  + +I+
Sbjct: 268 GVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSII 327

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           +  C+   +  A  LF+E+ ERG+  + +T+  LIHG C  G ++ A  L + M  + + 
Sbjct: 328 SWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLD 387

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
            ++V +NTLI+G+CK G +++A ++   M  +    +  +Y  +  G C +    EA R 
Sbjct: 388 MNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRW 447

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
            + MV KG+ P  VS   +I  +C+ G+  +A+     M  +G  P+ ++YNTLI+G+ +
Sbjct: 448 LFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSK 507

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +  + +A+ L  +ME+ G+  D+ TY  ++ G C  G++ ++  +L  +  KGL     T
Sbjct: 508 KGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVT 567

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           YT +I+G   +   +EAFR +DEM+  G  PDD
Sbjct: 568 YTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDD 600



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 133/250 (53%), Gaps = 35/250 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   ++D+A+M + EM+ +G+  + V +NTLIN YC++G ++EA ++ + M  KG
Sbjct: 361 LIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKG 420

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  +FTYN++  GLCK  R + AK  L  M++ G+ P+  ++  ++   C++ N+ EAE
Sbjct: 421 FENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAE 480

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING- 179
            +F +M ++G  P++V+++TLI  +S+ G+L  A     EM+S G+  D   YT +++G 
Sbjct: 481 RVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGE 540

Query: 180 ---------------YCRNGFVL-------------------EALKMRDEMLEKGCVMDV 205
                           CR G  +                   EA ++ DEM+  G   D 
Sbjct: 541 CVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDD 600

Query: 206 VTYNTILNGL 215
             Y +++  L
Sbjct: 601 RVYTSLVANL 610



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  C   K++ A   L E+ +KG+    VTY  +I+   +EG  EEAF+L + M   G
Sbjct: 536 LVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAG 595

Query: 61  LKPGVFTYNSLINGLCK 77
           L P    Y SL+  L K
Sbjct: 596 LTPDDRVYTSLVANLHK 612


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 240/464 (51%), Gaps = 1/464 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  +G+ P   T++ L+ A  +   ++    L+  M   GL+P ++TY   I  L + G+
Sbjct: 220 MVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGK 279

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A  ++  M   G  PD  TY  L+   C    + +A  +F +M      PD V++ T
Sbjct: 280 IDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVT 339

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  FS  G LD+    + EM++ G  PD V +TI++N  C+ G + EA  + D M ++G
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            + ++ TYNT+++GL RA  L +A DLF+ M   GV P  YT+  LI  H K G+  KAL
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             F+ M  + I P+IV  N  +    ++G + +A  ++ ++ S  ++P+ ++Y +++  Y
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCY 519

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G V EA +L  EM     +P ++  N++I    ++G   +A +   +M    + P  
Sbjct: 520 SKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTV 579

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YN L+ G  +E  + KA  L   M   G  P+ IT+N +L   C+   +  +  + ++
Sbjct: 580 VTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYK 639

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M      PD  T+ T+I+G + QN +K A     +M ++   PD
Sbjct: 640 MTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPD 682



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 258/490 (52%), Gaps = 10/490 (2%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  L +D KID A   +  M+  G  PD VTY  LI+A C    L++A  L   M     
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSH 330

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP   TY +L++     G  D+ +++  EM   G +PD  T+  L+   C+   ++EA +
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFD 390

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +   M ++GV P++ +++TLI    R  +LD AL  F  M+S G+ P    Y ++I+ + 
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHG 450

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++G   +AL+  ++M  +G   ++V  N  L  L     L EA  +FNE+   G+ PD  
Sbjct: 451 KSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSV 510

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  ++  + K G +++A+ L   M++   +PD++  N+LID   K G +E+A +++  M
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM 570

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
               ++P  ++Y IL+ G    G + +A +L+  M G G  P  ++ NT++   C++ + 
Sbjct: 571 EEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEV 630

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A +   KM +    PD +++NT+I+GF+++  +  A  L  +M+ + L PD +T   +
Sbjct: 631 DLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLCTL 689

Query: 422 LTGFCRQGRMHDSELILWRMIEK-----GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           L G  + G++ D+    +R+ E      G N DRS +  ++ G +++   ++A  F + +
Sbjct: 690 LPGVIKSGQIEDA----FRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERL 745

Query: 477 LQRGFVPDDA 486
           + R    DD+
Sbjct: 746 VCRAICKDDS 755



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 242/474 (51%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +  A   L +M + G   +  +YN LI+   + GF +EA ++   M  +GLKP + T+++
Sbjct: 175 LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSA 234

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+    K+        +L+EM  MGL P+  TY   +    R   + EA  I   M   G
Sbjct: 235 LMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG 294

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
             PD+V+++ LI       +LD A+  F +MKS+   PD V Y  +++ +   G + +  
Sbjct: 295 CGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVE 354

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+  EM   G   DVVT+  ++N LC+A  + EA DL + M ++GV P+ +T+ TLI G 
Sbjct: 355 KIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGL 414

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
            +   ++ AL+LF  M    ++P   TY  LID   K G   KA + +  M +R I+PN 
Sbjct: 415 LRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNI 474

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++    +     MG + EA  ++ E+   G+ P  V+ N ++K Y + G   +A + LS+
Sbjct: 475 VACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSE 534

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M     +PD I  N+LI+   +   +++A+ +  +ME   L P V+TYN++L G  ++G+
Sbjct: 535 MSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQ 594

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  +  +   M   G +P+  T+ TL++     + +  A +   +M      PD
Sbjct: 595 IQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPD 648



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 235/464 (50%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M+++ +  +  TY  +  +    G L +A   +  M   G     ++YN LI+ L + G 
Sbjct: 150 MQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGF 209

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
           C  A EV   M+  GL P   T++ L+V S ++ N+     +  EM   G+ P+I +++ 
Sbjct: 210 CKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTI 269

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I +  R+G++D A    + M   G  PD V YT++I+  C    + +A+ +  +M    
Sbjct: 270 CIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSS 329

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D VTY T+L+       L + + ++ EM   G  PD  TFT L++  CK G +N+A 
Sbjct: 330 HKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAF 389

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +L D M ++ + P++ TYNTLI G  +   ++ A  L+++M S  + P   +Y +LI+ +
Sbjct: 390 DLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYH 449

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              GH  +A   + +M  +GI P +V+CN  +      G   +A    +++ S G+ PDS
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YN ++  + +   +D+A  L+S+M      PDVI  N ++    + GR+ ++  +  R
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCR 569

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M E  L P   TY  L+ G   +  +++A +  + M   G  P+
Sbjct: 570 MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPN 613



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 264/563 (46%), Gaps = 87/563 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC   K+D A     +M+     PD VTY TL++ +   G L++  ++   M   G
Sbjct: 305 LIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+  L+N LCK GR + A ++LD M + G+ P+  TYNTL+    R   + +A 
Sbjct: 365 YAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDAL 424

Query: 121 EIFC-----------------------------------EMSRRGVAPDIVSFSTLIGIF 145
           ++F                                    +M  RG+AP+IV+ +  +   
Sbjct: 425 DLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSL 484

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           +  G+L  A   F E+KS+GL PD+V Y +++  Y + G V EA+K+  EM +  C  DV
Sbjct: 485 AEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDV 544

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +  N++++ L +A  + EA  +F  M E  + P   T+  L+ G  K+G + KA+ LF+ 
Sbjct: 545 IVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFES 604

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M      P+ +T+NTL+D  CK  E++ A K++  M +    P+ +++  +I+G+     
Sbjct: 605 MNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQ 664

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA----DEFLSKMVSEGVDPDSI 381
           +  A  L+++M  K ++P  V+  T++ G  +SG    A    ++F  ++   G + D  
Sbjct: 665 IKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQV---GSNIDRS 720

Query: 382 SYNTLINGFVREENMDKAF------------------------------------ALVSK 405
            +  ++ G + E   +KA                                       V  
Sbjct: 721 FWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKF 780

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK----GLNPDRSTYTTLINGHV 461
            +  G+ P +  YN+++ GF     +H+ E + W + E+    G  PD  TY +LI+ H 
Sbjct: 781 TKELGVKPTLKVYNLLIDGFL---EVHNVE-VAWNLFEEMKSAGCAPDTFTYNSLIDAHG 836

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
               + E F  +DEML RG  P+
Sbjct: 837 KSGKINELFDLYDEMLTRGCKPN 859



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 245/482 (50%), Gaps = 2/482 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K   I +    L EME  G+ P+  TY   I    R+G ++EA+++M  M   G  P V 
Sbjct: 241 KRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVV 300

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TY  LI+ LC   + D A  +  +M      PD  TY TLL +     ++ + E+I+ EM
Sbjct: 301 TYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM 360

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G APD+V+F+ L+    + G+++ A      M+  G++P+   Y  +I+G  R   +
Sbjct: 361 EADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRL 420

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +AL +   M   G      TY  +++   ++    +A + F +M  RG+ P+       
Sbjct: 421 DDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNAS 480

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           ++   + G + +A  +F+ +    + PD VTYN ++  + KVG++++A KL ++M   + 
Sbjct: 481 LYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQC 540

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I    LI+     G V EA++++  M    + PT+V+ N ++ G  + G   KA +
Sbjct: 541 EPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQ 600

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M   G  P++I++NTL++   + + +D A  +  KM      PDV+T+N I+ GF 
Sbjct: 601 LFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFI 660

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML-QRGFVPDD 485
           +Q ++ ++ + L+  ++K L PD  T  TL+ G +    +++AFR  ++   Q G   D 
Sbjct: 661 KQNQIKNA-IWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDR 719

Query: 486 AF 487
           +F
Sbjct: 720 SF 721



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 251/490 (51%), Gaps = 11/490 (2%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ LCK+ ++D A     +M      PD +T+NT+I+ + ++  ++ A  L + M  K 
Sbjct: 620  LLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KL 678

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNT----LLVESCRKEN 115
            L+P   T  +L+ G+ K G+ + A  + ++   Q+G + D + +      +L E+  ++ 
Sbjct: 679  LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKA 738

Query: 116  MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYT 174
            +   E + C    R +  D      +I +  ++ +   A  ++ +  K  G+ P   +Y 
Sbjct: 739  ILFGERLVC----RAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYN 794

Query: 175  IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            ++I+G+     V  A  + +EM   GC  D  TYN++++   ++  + E  DL++EML R
Sbjct: 795  LLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTR 854

Query: 235  GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            G  P+  T+  +I    K   ++KA++L+  +      P   T+  LIDG  K G ++ A
Sbjct: 855  GCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDA 914

Query: 295  NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            ++++  M+     PN   Y IL+NGY  +GHV  A   +  MV +GI+P L S   ++  
Sbjct: 915  HEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDI 974

Query: 355  YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             C +G    A  +  K+   G+DPD ++YN +ING  R +  ++A +L  +M+N+G+VPD
Sbjct: 975  LCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPD 1034

Query: 415  VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            + TYN ++      G + ++  I   +   GL P+  TY  LI G+    N + A+  + 
Sbjct: 1035 LYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYK 1094

Query: 475  EMLQRGFVPD 484
            +M+  G  P+
Sbjct: 1095 KMMVGGCDPN 1104



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/558 (26%), Positives = 257/558 (46%), Gaps = 73/558 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VNALCK  +I+ A   L  M ++GV P+  TYNTLI+   R   L++A  L ++M   G
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434

Query: 61  LKPGVFTYNSLIN-----------------------------------GLCKKGRCDRAK 85
           ++P  +TY  LI+                                    L + GR   AK
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAK 494

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            + +E+   GL+PD+ TYN ++    +   + EA ++  EMS+    PD++  ++LI   
Sbjct: 495 AMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTL 554

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G+++ A   F  M+   L P  V Y I++ G  + G + +A+++ + M   GC  + 
Sbjct: 555 YKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNT 614

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +T+NT+L+ LC+   +  A  +F +M      PD  TF T+IHG  K   +  A+ LF  
Sbjct: 615 ITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQ 674

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL----------------WADMISRKISPN 309
           M +K ++PD VT  TL+ G  K G++E A ++                W D++   ++  
Sbjct: 675 M-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEA 733

Query: 310 YISYGIL--------------------INGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSC 348
                IL                    I   C     + A  ++ +   + G+KPTL   
Sbjct: 734 GTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVY 793

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I G+    +   A     +M S G  PD+ +YN+LI+   +   +++ F L  +M  
Sbjct: 794 NLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLT 853

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G  P+ ITYN++++   +  R+  +  + + ++    +P   T+  LI+G +    L +
Sbjct: 854 RGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDD 913

Query: 469 AFRFHDEMLQRGFVPDDA 486
           A    D M+  G  P+ A
Sbjct: 914 AHEMFDGMVHYGCRPNSA 931



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 225/479 (46%), Gaps = 4/479 (0%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTV----TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           H I      L   +  G  P+ V    T N ++        +E+   + + M  + ++  
Sbjct: 99  HSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRN 158

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V TY  +   L  +G   +A   L++M + G   +  +YN L+    +     EA E++ 
Sbjct: 159 VDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYR 218

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            M   G+ P + +FS L+    +   +   +    EM+S GL P+   YTI I    R+G
Sbjct: 219 RMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDG 278

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + EA ++   M + GC  DVVTY  +++ LC A+ L +A  LF +M      PD  T+ 
Sbjct: 279 KIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYV 338

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TL+      G+++K   ++  M      PD+VT+  L++  CK G + +A  L   M  +
Sbjct: 339 TLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQ 398

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + PN  +Y  LI+G      + +A  L+  M   G++PT  +   +I  + +SG   KA
Sbjct: 399 GVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKA 458

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E   KM + G+ P+ ++ N  +        + +A A+ +++++ GL PD +TYN+++  
Sbjct: 459 LETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKC 518

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           + + G++ ++  +L  M +    PD     +LI+       ++EA++    M +    P
Sbjct: 519 YSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAP 577



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 168/318 (52%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++   + H ++ A     EM+  G  PDT TYN+LI+A+ + G + E F L + M  +G
Sbjct: 796  LIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG 855

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             KP   TYN +I+ L K  R D+A ++   ++    SP   T+  L+    +   + +A 
Sbjct: 856  CKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAH 915

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            E+F  M   G  P+   ++ L+  + + G +D A  +F+ M   G+ PD   YTI+++  
Sbjct: 916  EMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDIL 975

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            C  G V +AL   +++ + G   D+V YN ++NGL R++   EA  LF+EM  RG+ PD 
Sbjct: 976  CIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDL 1035

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            YT+ +LI      G + +A  +++ +    +KP++ TYN LI G+   G  E A  ++  
Sbjct: 1036 YTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKK 1095

Query: 301  MISRKISPNYISYGILIN 318
            M+     PN  ++  L N
Sbjct: 1096 MMVGGCDPNTGTFAQLPN 1113



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 192/418 (45%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T N ++  L    R +    V D M +  +  +  TY  +      +  + +A     +M
Sbjct: 126 TCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKM 185

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G   +  S++ LI    ++G    AL  +R M S GL P    ++ ++    +   +
Sbjct: 186 REAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNI 245

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
              + + +EM   G   ++ TY   +  L R   + EA  +   M + G  PD  T+T L
Sbjct: 246 KTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVL 305

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I   C    ++ A+ LF  M   S KPD VTY TL+D F   G ++K  K+W +M +   
Sbjct: 306 IDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGY 365

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           +P+ +++ IL+N  C  G + EAF L   M  +G+ P L + NT+I G  R+     A +
Sbjct: 366 APDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALD 425

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
             S M S GV+P + +Y  LI+   +  +  KA     KM+ +G+ P+++  N  L    
Sbjct: 426 LFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLA 485

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             GR+ +++ +   +   GL PD  TY  ++  +     + EA +   EM +    PD
Sbjct: 486 EMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPD 543


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 152/510 (29%), Positives = 256/510 (50%), Gaps = 27/510 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +  + H+         +M    V P T T+N LI++ C     + A QL   M  KG
Sbjct: 121 LLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKG 180

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FT   L+ GLC+ G   +A E+++      ++ +   YNTL+   CR+E  +EAE
Sbjct: 181 CCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIA-NRVVYNTLVSRFCREEMNNEAE 239

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK---SAGLV-PDNVLYTII 176
            +   M+  GV PD+V+F++ I    R G++  A   FR+M+     GL  P+ V + ++
Sbjct: 240 RLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLM 299

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           + G+C++G + +A  + + M + G    +  YN  L GL R   L EA  + +EM+ +G+
Sbjct: 300 LKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGI 359

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+ YT+  ++ G C++  ++ A  L D+M +  + PD V Y+TL+ G+C  G++ +A  
Sbjct: 360 EPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKS 419

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +  +MI     PN  +   L++     G   EA  +  +M  K  +P  V+CN ++ G C
Sbjct: 420 VLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLC 479

Query: 357 RSGDASKADEFLSKMVSEGVD----------------------PDSISYNTLINGFVREE 394
           R+G+  KA E +S+M + G                        PD I+Y TLING  +  
Sbjct: 480 RNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVG 539

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            +++A     +M  + L PD +TY+  +  FC+QG++  +  +L  M   G +    TY 
Sbjct: 540 RLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYN 599

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            LI G  S N + E +   DEM ++G  PD
Sbjct: 600 ALILGLGSNNQIFEIYGLKDEMKEKGISPD 629



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 257/510 (50%), Gaps = 27/510 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC+    D A     +M QKG  P+  T   L+   CR G +++A +L+N+ +   
Sbjct: 156 LIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCR 215

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V  YN+L++  C++   + A+ +++ M ++G+ PD  T+N+ +   CR   + EA 
Sbjct: 216 IANRV-VYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEAS 274

Query: 121 EIFCEM---SRRGVA-PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            IF +M   +  G+  P++V+F+ ++  F ++G +  A      MK  G       Y I 
Sbjct: 275 RIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIW 334

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           + G  RNG +LEA  + DEM+ KG   +  TYN +++GLCR  ML++A  L + M+  GV
Sbjct: 335 LMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGV 394

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
           +PD   ++TL+HG+C  G + +A ++   M +   +P+  T NTL+    K G   +A +
Sbjct: 395 YPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEE 454

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK-------------- 342
           +   M  +   P+ ++  I++NG C  G + +A  +  EM   G                
Sbjct: 455 MLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINS 514

Query: 343 --------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
                   P  ++  T+I G C+ G   +A +   +M+++ + PDS++Y+T I  F ++ 
Sbjct: 515 IHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQG 574

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            +  AF ++  ME  G    + TYN ++ G     ++ +   +   M EKG++PD  TY 
Sbjct: 575 KISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYN 634

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +I         K+A     EML +G  P+
Sbjct: 635 NIITCLCEGGKAKDAISLLHEMLDKGISPN 664



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 244/511 (47%), Gaps = 35/511 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK--GVYPDTVTYNTLINA---YCREGFLEEAFQLMNS 55
           MV  L +   +D A      +  +   + P    YN L+ +   + R GF+     L + 
Sbjct: 84  MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVS---WLYSD 140

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M    + P  +T+N LI+ LC+    D A ++ ++M Q G  P+  T   L+   CR   
Sbjct: 141 MLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGL 200

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + +A E+    +   +A  +V ++TL+  F R    + A      M   G++PD V +  
Sbjct: 201 VKQALELVNNNNSCRIANRVV-YNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNS 259

Query: 176 IINGYCRNGFVLEALKM-RDEMLEKGCVM---DVVTYNTILNGLCRAKMLTEADDLFNEM 231
            I+  CR G V+EA ++ RD  ++    +   +VVT+N +L G C+  M+ +A  L   M
Sbjct: 260 RISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETM 319

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
            + G F     +   + G  ++G + +A  + D M  K I+P+  TYN ++DG C+   +
Sbjct: 320 KKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHML 379

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
             A  L   M+   + P+ ++Y  L++GYCS G V EA  + +EM+  G +P   +CNT+
Sbjct: 380 SDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTL 439

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG- 410
           +    + G   +A+E L KM  +   PD+++ N ++NG  R   +DKA  +VS+M   G 
Sbjct: 440 LHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGP 499

Query: 411 ---------------------LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                                 +PD ITY  ++ G C+ GR+ +++     M+ K L PD
Sbjct: 500 TSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPD 559

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
             TY T I     Q  +  AFR   +M + G
Sbjct: 560 SVTYDTFIWSFCKQGKISSAFRVLKDMERNG 590



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 244/501 (48%), Gaps = 27/501 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   CK   +  A+  +  M++ G +     YN  +    R G L EA  +++ M  KG
Sbjct: 299 MLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKG 358

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  +TYN +++GLC+      A+ ++D M++ G+ PDT  Y+TLL   C +  + EA+
Sbjct: 359 IEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAK 418

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM R G  P+  + +TL+    + G+   A    ++M      PD V   I++NG 
Sbjct: 419 SVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGL 478

Query: 181 CRNGFVLEALKMRDEM-------LEKG---------------CVMDVVTYNTILNGLCRA 218
           CRNG + +A ++  EM       L+KG               C+ D +TY T++NGLC+ 
Sbjct: 479 CRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKV 538

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
             L EA   F EML + + PD  T+ T I   CK G ++ A  +   M +      + TY
Sbjct: 539 GRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTY 598

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           N LI G     ++ +   L  +M  + ISP+  +Y  +I   C  G   +A  L +EM+ 
Sbjct: 599 NALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLD 658

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           KGI P + S   +IK + +S D   A E     ++     +++ Y+ + N  +    + +
Sbjct: 659 KGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL-YSLMFNELLAGGQLSE 717

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  L     ++ L      Y  ++   C+  R+ D+  +L+++I+KG   D +++  +I+
Sbjct: 718 AKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVID 777

Query: 459 GHVSQNNLKEAFRFHDEMLQR 479
           G   + N ++A    DE+ +R
Sbjct: 778 GLSKRGNKRQA----DELAKR 794



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 187/361 (51%), Gaps = 11/361 (3%)

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           ++P +  ++ L+    R+ +       + +M +A + P    + ++I+  C +     AL
Sbjct: 111 LSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHAL 170

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++ ++M +KGC  +  T   ++ GLCRA ++ +A +L N         +   + TL+   
Sbjct: 171 QLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNN-NSCRIANRVVYNTLVSRF 229

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM-------IS 303
           C++   N+A  L + M +  + PD+VT+N+ I   C+ G++ +A++++ DM       + 
Sbjct: 230 CREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLP 289

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R   PN +++ +++ G+C  G + +A  L   M   G   +L   N  + G  R+G+  +
Sbjct: 290 R---PNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLE 346

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A   L +MV++G++P++ +YN +++G  R   +  A  L+  M   G+ PD + Y+ +L 
Sbjct: 347 ARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLH 406

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G+C +G++ +++ +L  MI  G  P+  T  TL++    +    EA     +M ++ + P
Sbjct: 407 GYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQP 466

Query: 484 D 484
           D
Sbjct: 467 D 467



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 157/358 (43%), Gaps = 56/358 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++L K+ +   A+  L +M +K   PDTVT N ++N  CR G L++A ++++ M   G
Sbjct: 439 LLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNG 498

Query: 61  LK----------------------PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSP 98
                                   P   TY +LINGLCK GR + AK+   EML   L P
Sbjct: 499 PTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRP 558

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
           D+ TY+T +   C++  +S A  +  +M R G +  + +++ LI     N Q+       
Sbjct: 559 DSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLK 618

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT----------- 207
            EMK  G+ PD   Y  II   C  G   +A+ +  EML+KG   +V +           
Sbjct: 619 DEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKS 678

Query: 208 -----------------------YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
                                  Y+ + N L     L+EA +LF   L+R +    + + 
Sbjct: 679 SDFKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYK 738

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
            LI   C+D  +  A +L   +  K    D  ++  +IDG  K G   +A++L   M+
Sbjct: 739 DLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMM 796


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 146/469 (31%), Positives = 240/469 (51%), Gaps = 12/469 (2%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM  +G  P   T+N +I  +C  G +  A  L+  M   G+ P V +YN LI G C  G
Sbjct: 209 EMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFG 268

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
               A ++ +EM + G  P   TYN L+   C +  M EA  +F EM++ G+  + ++F+
Sbjct: 269 WSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFN 328

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD----E 195
            LI  +++ G++D+A   +REMK+ GLVPD+  + II  G  + G   + +   D     
Sbjct: 329 VLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSH 388

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           ML  G  MD++        LC    L +A +L    +E+G       F  LI  + K+G 
Sbjct: 389 MLADG--MDMLVCR-----LCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGL 441

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
             +A  L+ IM +  + P   T+N LI G C  G +++A  L   M+S+    +  S+ I
Sbjct: 442 HEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS-TSFTI 500

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
            ++     G+   A + W +M   G++P  ++ +  I G CR    ++A +  ++M + G
Sbjct: 501 CLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARG 560

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           + P++ +YN++I+   R  NM +A  L   M   GLVPD+ T N+++ G CR+G++   +
Sbjct: 561 IVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVD 620

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +L  M   GL PD  TY T+IN +    ++  A  F ++ML  G  PD
Sbjct: 621 NLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPD 669



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 245/516 (47%), Gaps = 34/516 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C    +  A   L  M + G+ P+  +YN LI  +C  G+  +AF+L   M   G
Sbjct: 225 MILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSG 284

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN L++ LC +GR   A+ + DEM Q+G+  +T T+N L+    +   M +A 
Sbjct: 285 CEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQAC 344

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNG------------------------------- 149
             + EM  RG+ PD  +F+ +     + G                               
Sbjct: 345 AAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWD 404

Query: 150 -QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
            +LD A    R     G       +  +I  Y + G   EA ++   M + G      T+
Sbjct: 405 CRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTF 464

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N ++ GLC    L EA  L   M+ +G +    +FT  +    ++GN   AL  +D M +
Sbjct: 465 NYLIMGLCNQGRLDEAQLLLEHMVSKG-YCLSTSFTICLDASFREGNAVCALKCWDDMGK 523

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             ++PD + ++  I+G C++  + +A + +A+M +R I PN  +Y  +I+  C  G++TE
Sbjct: 524 LGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTE 583

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A +L   M   G+ P + + N +I G CR G     D  L  M S G+ PD+++YNT+IN
Sbjct: 584 ALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIIN 643

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
            + R ++M+ A   ++KM   G  PD+ TYN+ +   C    ++ +  +L  ++  G  P
Sbjct: 644 AYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPP 703

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D  TY TL++G +  + L  A      +++  F P+
Sbjct: 704 DSVTYNTLMDG-ICSDVLDRAMILTGRLIKMAFQPN 738



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 229/461 (49%), Gaps = 34/461 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LC + ++  A+    EM Q G+  +T+T+N LI+ Y + G +++A      M  +G
Sbjct: 295 LVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARG 354

Query: 61  LKPGVFTYNSLING--------------------------------LCKKGRCDRAKEVL 88
           L P   T+N +  G                                LC   R D A E+L
Sbjct: 355 LVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELL 414

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
              ++ G       +N L+    ++    EA E++  M++ G+AP   +F+ LI      
Sbjct: 415 RGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQ 474

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+LD A +    M S G       +TI ++   R G  + ALK  D+M + G   D + +
Sbjct: 475 GRLDEAQLLLEHMVSKGYCLSTS-FTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAF 533

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           +  +NGLCR   + EA   F EM  RG+ P+ +T+ ++I   C+ GNM +AL L   M Q
Sbjct: 534 SAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQ 593

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PDI T N LIDG C+ G++E  + L  DM S  ++P+ ++Y  +IN YC    +  
Sbjct: 594 NGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNS 653

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A     +M+  G +P + + N  +   C +   ++A + L ++V+ G  PDS++YNTL++
Sbjct: 654 AMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMD 713

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           G +  + +D+A  L  ++      P+ IT NV L+ FC+QG
Sbjct: 714 G-ICSDVLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQG 753



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 182/407 (44%), Gaps = 45/407 (11%)

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
           +EA ++   + R G  P + + + L+ +  R+G++  A   F EM + G  P    +  +
Sbjct: 166 AEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLATFNAM 225

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I G+C  G V  A  +   M E G V +V +YN ++ G C      +A  LF EM   G 
Sbjct: 226 ILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGC 285

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P   T+  L+   C +G M +A  LFD M Q  I+ + +T+N LIDG+ K G M++A  
Sbjct: 286 EPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACA 345

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFR----LWYEMVGKGIKPTLVSCNTII 352
            + +M +R + P+  ++ I+  G    GH  +           M+  G+   ++ C    
Sbjct: 346 AYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMD--MLVCRLCW 403

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
              CR  DA    E L   + +G       +N LI  + +E   ++AF L   M   GL 
Sbjct: 404 D--CRLDDAW---ELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLA 458

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEK---------------------------- 444
           P   T+N ++ G C QGR+ +++L+L  M+ K                            
Sbjct: 459 PSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNAVCALKCW 518

Query: 445 ------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                 GL PD   ++  ING    + + EA++   EM  RG VP++
Sbjct: 519 DDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNN 565



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 32/307 (10%)

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           L+    A M  EA D+   +   G  P       L+    + G ++ A N+F+ M  +  
Sbjct: 156 LHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGP 215

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           +P + T+N +I GFC  G +  A+ L   M    I PN  SY ILI G+C  G   +AF+
Sbjct: 216 RPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFK 275

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L+ EM   G +PT+V+ N ++   C  G   +A     +M   G+  ++I++N LI+G+ 
Sbjct: 276 LFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYA 335

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTG--------------------------- 424
           +   MD+A A   +M+ +GLVPD  T+N+I  G                           
Sbjct: 336 KTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMD 395

Query: 425 -----FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
                 C   R+ D+  +L   IE+G     + +  LI  +  +   +EAF  +  M + 
Sbjct: 396 MLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKL 455

Query: 480 GFVPDDA 486
           G  P  +
Sbjct: 456 GLAPSSS 462



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 155/346 (44%), Gaps = 34/346 (9%)

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           + ++ +   G   EAL +   +   G    +     +L  L R+  +  A ++F EM  R
Sbjct: 154 LALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAAR 213

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P   TF  +I G C  G +  A  L  IM +  I P++ +YN LI G C  G    A
Sbjct: 214 GPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDA 273

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            KL+ +M      P  ++Y IL++  C  G + EA RL+ EM   GI+   ++ N +I G
Sbjct: 274 FKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDG 333

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLING---------FVREENM--------- 396
           Y ++G   +A     +M + G+ PDS ++N +  G          V + +M         
Sbjct: 334 YAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADG 393

Query: 397 --------------DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
                         D A+ L+     QG    V  +N ++  + ++G +H+    L+R++
Sbjct: 394 MDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEG-LHEEAFELYRIM 452

Query: 443 EK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            K GL P  ST+  LI G  +Q  L EA    + M+ +G+    +F
Sbjct: 453 NKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSF 498



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 133/278 (47%), Gaps = 37/278 (13%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N LC+   ++ A     EM  +G+ P+  TYN++I+A CR G + EA +L  +M   GL
Sbjct: 537 INGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGL 596

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P ++T N LI+GLC++G+ +    +L +M   GL+PDT TYNT++   CR ++M+ A  
Sbjct: 597 VPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMN 656

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING-- 179
              +M   G  PDI +++  +     N  L++A     E+ + G  PD+V Y  +++G  
Sbjct: 657 FMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGIC 716

Query: 180 --------------------------------YCRNGFVLEALKMRDEMLEKGCVMDVVT 207
                                           +C+ GF   AL   +++ E   V D  T
Sbjct: 717 SDVLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLREDSFVFDDAT 776

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
            N I     R + L +     NE +ER +F +F  F T
Sbjct: 777 RNII--DWAR-RELEDDPHANNEDIERCLFLEFLMFMT 811



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 3/171 (1%)

Query: 313 YGIL---INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
           YG L   ++ + + G   EA  +   +   G  P+L +   +++   RSG+   A     
Sbjct: 149 YGALRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFE 208

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +M + G  P   ++N +I GF     +  A  L+  M   G+VP+V +YN+++ G C  G
Sbjct: 209 EMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFG 268

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
              D+  +   M   G  P   TY  L++    +  + EA R  DEM Q G
Sbjct: 269 WSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVG 319


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 236/426 (55%), Gaps = 19/426 (4%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P   + N+L+ GL    R D A++     L+  +SPD  T+NT++   CR   + +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNG---QLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           +  ++   G+AP + ++++LI  + + G    +    M  +EM  AG+ P  V + ++IN
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYC+N     A+++ +EM ++G    VVTYN++++GLC    + E   L  EM + G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF  ++ G CK G M  A +  D MT+++++PD+V Y  LIDG+ ++G+ME A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M  + ISPN  +Y  LI G+   G    A  L  EM  KGI+  +V+ N +I   C  
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  KA + L +M   G++P+ ++YNT+I GF  + N+  A+ + ++ME      +V+TY
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           NV +  FC+ G+M ++  +L  M++K L P+  TY T+  G                M++
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------MME 556

Query: 479 RGFVPD 484
           +G+ PD
Sbjct: 557 KGYTPD 562



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 224/425 (52%), Gaps = 19/425 (4%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P T + N L+        ++ A +   S   + + P ++T+N++I+GLC+ G+  +A +V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRK---ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             ++   GL+P  ATYN+L+   C+K    NM   + +  EM   G++P  V+F  LI  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + +N     A+  F EMK  G+    V Y  +I+G C  G V E +K+ +EM + G   +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            +T+  +L G C+  M+ +A+D  + M ER V PD   +T LI G+ + G M  A+ + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +K I P++ TYN LI GF + G+   A+ L  +M  + I  + ++Y +LI   C  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A +L  EM   G++P  ++ NTII+G+C  G+   A E  ++M       + ++YN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             I  F +   MD+A  L+++M ++ LVP+ ITY  I  G                M+EK
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------MMEK 557

Query: 445 GLNPD 449
           G  PD
Sbjct: 558 GYTPD 562



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 213/396 (53%), Gaps = 3/396 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    ++D A+       ++ V PD  T+NT+I+  CR G L +A  +   +   G
Sbjct: 162 LLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWG 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEV---LDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           L P V TYNSLI+G CKKG       V   L EM++ G+SP   T+  L+   C+  N +
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A  +F EM ++G+A  +V++++LI      G+++  +    EM+  GL P+ + +  ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G+C+ G + +A    D M E+    DVV Y  +++G  R   + +A  +   M ++G+ 
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGIS 401

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  LI G  + G+   A  L D M +K I+ D+VTYN LI   C  GE+ KA KL
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M    + PN+++Y  +I G+C  G++  A+ +   M     +  +V+ N  IK +C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            G   +A++ L++M+ + + P+ I+Y T+  G + +
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEK 557



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 108/313 (34%), Positives = 175/313 (55%)

Query: 16  MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL 75
           M L EM + G+ P  VT+  LIN YC+      A ++   M  +G+   V TYNSLI+GL
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309

Query: 76  CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           C +G+ +   ++++EM  +GLSP+  T+  +L   C+K  M++A +    M+ R V PD+
Sbjct: 310 CSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           V ++ LI  + R G+++ A+     M   G+ P+   Y  +I G+ R+G    A  + DE
Sbjct: 370 VIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M EKG   DVVTYN ++  LC    + +A  L +EM E G+ P+  T+ T+I G C  GN
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +  A  +   M +   + ++VTYN  I  FC++G+M++AN L  +M+ + + PN I+Y  
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET 549

Query: 316 LINGYCSMGHVTE 328
           +  G    G+  +
Sbjct: 550 IKEGMMEKGYTPD 562



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K++ A      M +KG+ P+  TYN LI  + R G    A  L++ M  KG++  V TYN
Sbjct: 384 KMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI  LC KG   +A ++LDEM ++GL P+  TYNT++   C K N+  A EI   M + 
Sbjct: 444 VLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKC 503

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
               ++V+++  I  F + G++D A     EM    LVP+ + Y  I  G    G+
Sbjct: 504 RKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 3/181 (1%)

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+  S   L+ G      V  A + +   + + + P + + NT+I G CR G   KA + 
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREE---NMDKAFALVSKMENQGLVPDVITYNVILTG 424
              + + G+ P   +YN+LI+G+ ++    NM     L+ +M   G+ P  +T+ V++ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +C+      +  +   M ++G+     TY +LI+G  S+  ++E  +  +EM   G  P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 485 D 485
           +
Sbjct: 334 E 334


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 232/417 (55%), Gaps = 19/417 (4%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L+    K G  D A E  D     G      + N +LV   ++  +   E ++ EM RR 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +  ++V+F  +I    + G+  +A     +MK+ G  P  + Y  II+GYC+ G + +A 
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            +  EM+ K    + +T+N +++G CR + +T A  +F EM  +G+ P+  T+ +LI+G 
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C +G +++AL L D M+   +KP++VTYN LI+GFCK   +++A ++  D+  R ++PN 
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           I++  LI+ Y   G + +AF L   M+  G+ P + + N +I G+CR G+  +A +   +
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSK---MENQGLVPDVITYNVILTGFCR 427
           M   G+  D ++YN L++   ++    KA  L+ +   ME +G   +++TYNV++ GFC 
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCN 524

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +G++ ++  +L  M+EKGL P+R+TY  L                 DEM+++GF+PD
Sbjct: 525 KGKLEEANRLLNEMLEKGLIPNRTTYDIL----------------RDEMMEKGFIPD 565



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 224/403 (55%), Gaps = 8/403 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V A  K+ ++D A          G     ++ N ++ +  +EG +     +   M  + 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V T++ +INGLCK G+  +A +V+++M   G SP   TYNT++   C+   M +A+
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  + + P+ ++F+ LI  F R+  +  A   F EM+  GL P+ V Y  +ING 
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C NG + EAL ++D+M   G   +VVTYN ++NG C+ KML EA ++ +++ +RG+ P+ 
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF TLI  + K G M+ A  L  +M    + P++ TYN LI GFC+ G +++A KL  +
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV---GKGIKPTLVSCNTIIKGYCR 357
           M    +  + ++Y IL++  C  G   +A RL  EM     KG +  +V+ N +IKG+C 
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCN 524

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
            G   +A+  L++M+ +G+ P+  +Y+ L     R+E M+K F
Sbjct: 525 KGKLEEANRLLNEMLEKGLIPNRTTYDIL-----RDEMMEKGF 562



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 236/436 (54%), Gaps = 26/436 (5%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           +++  + L+ AY + G ++ A +  +     G +    + N ++  L K+GR    + V 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            EM++  +  +  T++ ++   C+     +A ++  +M   G +P +++++T+I  + + 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G++ +A    +EM +  + P+ + + I+I+G+CR+  V  A K+ +EM  +G   +VVTY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N+++NGLC    L EA  L ++M   G+ P+  T+  LI+G CK   + +A  + D + +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           + + P+++T+NTLID + K G M+ A  L + M+   + PN  +Y  LI G+C  G+V E
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV---SEGVDPDSISYNT 385
           A +L  EM G G+K  LV+ N ++   C+ G+  KA   L +M     +G   + ++YN 
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNV 517

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI GF  +  +++A  L+++M  +GL+P+  TY+++                   M+EKG
Sbjct: 518 LIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD----------------EMMEKG 561

Query: 446 LNPDRSTYTTLINGHV 461
             PD       I+GH+
Sbjct: 562 FIPD-------IDGHL 570



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 201/388 (51%), Gaps = 6/388 (1%)

Query: 94  MGLSPDTATYNTL--LVESCRKENMSEAEEIFCEMS---RRGVAPDIVSFSTLIGIFSRN 148
           + L  +   YN +  L++S  K        IF  +S     G A  I+    L+  + +N
Sbjct: 114 LHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSII-VDMLVWAYVKN 172

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G++D AL  F      G     +    ++    + G +     +  EM+ +   ++VVT+
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           + ++NGLC+     +A D+  +M   G  P   T+ T+I G+CK G M KA  L   M  
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA 292

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K I P+ +T+N LIDGFC+   +  A K++ +M  + + PN ++Y  LING CS G + E
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDE 352

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L  +M G G+KP +V+ N +I G+C+     +A E L  +   G+ P+ I++NTLI+
Sbjct: 353 ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLID 412

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
            + +   MD AF L S M + G+ P+V TYN ++ GFCR+G + ++  +   M   GL  
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           D  TY  L++    +   ++A R  DEM
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEM 500



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 199/347 (57%), Gaps = 3/347 (0%)

Query: 140 TLIGIFSRNGQLDRALMY--FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
            L+  F++N     + ++     + S G   ++++  +++  Y +NG +  AL+  D   
Sbjct: 128 ALLDSFAKNAHYSNSTIFHSLSVLGSWGCA-NSIIVDMLVWAYVKNGEMDLALEGFDRAG 186

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           + G  +  ++ N +L  L +   +   + ++ EM+ R +  +  TF  +I+G CK G   
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           KA ++ + M      P ++TYNT+IDG+CK G+M KA+ L  +M++++I PN I++ ILI
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G+C   +VT A +++ EM  +G++P +V+ N++I G C +G   +A     KM   G+ 
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+ ++YN LINGF +++ + +A  ++  +  +GL P+VIT+N ++  + + GRM D+ L+
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              M++ G+ P+ STY  LI G   + N+KEA +   EM   G   D
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKAD 473



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/135 (20%), Positives = 66/135 (48%)

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           ++  Y ++G+   A E   +    G    ++S N ++   V+E  +    ++  +M  + 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           +  +V+T++V++ G C+ G+   +  ++  M   G +P   TY T+I+G+     + +A 
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284

Query: 471 RFHDEMLQRGFVPDD 485
               EM+ +   P++
Sbjct: 285 ALLKEMVAKRIHPNE 299


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 251/472 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  +   A   L EME  G  P  VTYN+LI+AY R+G L+EA +L + M  KG
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKG 391

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP VFTY +L++G  K G+ D A +V +EM   G  P+  T+N L+     + N  E  
Sbjct: 392 IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMM 451

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F E+      PDIV+++TL+ +F +NG        F+EMK AG VP+   +  +I+ Y
Sbjct: 452 KVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAY 511

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R GF  +A+ +   ML+ G   D+ TYN +L  L R  +  +++ +  EM +    P+ 
Sbjct: 512 SRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNE 571

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+H +     + +   L + +    I+P  V   TL+  + K   + +  + + +
Sbjct: 572 LTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLE 631

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  SP+  +   +++ Y     V++   +   +   G  P+L + N+++  Y R+  
Sbjct: 632 LREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEH 691

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K+++ L +++++G+ PD IS+NT+I  + R   M +A  + ++M++ GL PDVITYN 
Sbjct: 692 FEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNT 751

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            +  +       ++  ++  MI+ G  P+++TY +LI+     N   EA  F
Sbjct: 752 FIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSF 803



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/500 (30%), Positives = 251/500 (50%), Gaps = 37/500 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFL-EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           M+  GV PD  TYNTLI++ CR G L EEA ++   M   G  P   TYN+L++   K  
Sbjct: 282 MKSSGVAPDLYTYNTLISS-CRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSR 340

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A EVL EM   G +P   TYN+L+    R   + EA E+  +M ++G+ PD+ +++
Sbjct: 341 RPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYT 400

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  F + G+ D A+  F EM+ AG  P+   +  +I  +   G  +E +K+ +E+   
Sbjct: 401 TLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKIC 460

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
            CV D+VT+NT+L    +  M +E   +F EM   G  P+  TF TLI  + + G  ++A
Sbjct: 461 ECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQA 520

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + ++  M    + PD+ TYN ++    + G  E++ K+ A+M   +  PN ++Y  L++ 
Sbjct: 521 MAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA 580

Query: 320 YCSMGHV-----------------------------------TEAFRLWYEMVGKGIKPT 344
           Y +   V                                   TE  R + E+  +G  P 
Sbjct: 581 YANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPD 640

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + + N ++  Y R    SK +E L+ +   G  P   +YN+L+  + R E+ +K+  ++ 
Sbjct: 641 ITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILR 700

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++  +G+ PD+I++N ++  +CR GRM ++  I   M + GL PD  TY T I  + S +
Sbjct: 701 EIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDS 760

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
              EA      M++ G  P+
Sbjct: 761 MFIEAIDVVKYMIKNGCKPN 780



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 254/556 (45%), Gaps = 73/556 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K+ +   A   L ++   GV+ D   Y +LI AY   G   EA  +   +  +G
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250

Query: 61  LKPGVFTYNSLINGLCKKG-RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-SE 118
            +P + TYN ++N   K G    +   ++D M   G++PD  TYNTL + SCR+ ++  E
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTL-ISSCRRGSLYEE 309

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A E+F EM   G +PD V+++ L+ ++ ++ +   A+   +EM+++G  P  V Y  +I+
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            Y R+G + EA++++ +M++KG   DV TY T+L+G  +      A  +F EM   G  P
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF  LI  H   GN  + + +F+ +      PDIVT+NTL+  F + G   + + ++
Sbjct: 430 NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVF 489

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M      P   ++  LI+ Y   G   +A  ++  M+  G+ P L + N ++    R 
Sbjct: 490 KEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARG 549

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS-------------- 404
           G   ++++ L++M      P+ ++Y +L++ +   + +++  AL                
Sbjct: 550 GLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLL 609

Query: 405 ---------------------KMENQGLVPDVIT-------------------------- 417
                                ++  QG  PD+ T                          
Sbjct: 610 KTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKD 669

Query: 418 ---------YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
                    YN ++  + R      SE IL  +I KG+ PD  ++ T+I  +     +KE
Sbjct: 670 SGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKE 729

Query: 469 AFRFHDEMLQRGFVPD 484
           A R   EM   G  PD
Sbjct: 730 ASRIFAEMKDFGLAPD 745



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 172/348 (49%), Gaps = 3/348 (0%)

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + +I +  + G+   A     ++++ G+  D   YT +I  Y  NG   EA+ +  ++ E
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248

Query: 199 KGCVMDVVTYNTILNGLCRAKM-LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM- 256
           +GC   ++TYN ILN   +  M  ++   L + M   GV PD YT+ TLI   C+ G++ 
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLI-SSCRRGSLY 307

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            +A  +F+ M      PD VTYN L+D + K     +A ++  +M +   +P+ ++Y  L
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+ Y   G + EA  L  +MV KGIKP + +  T++ G+ ++G    A +   +M   G 
Sbjct: 368 ISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGC 427

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+  ++N LI       N  +   +  +++    VPD++T+N +L  F + G   +   
Sbjct: 428 QPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSG 487

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   M   G  P+R T+ TLI+ +       +A   +  ML  G  PD
Sbjct: 488 VFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPD 535



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 157/325 (48%), Gaps = 37/325 (11%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM++ G  P+  T+NTLI+AY R GF ++A  +   M   G+ P + TYN+++  L + G
Sbjct: 491 EMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG 550

Query: 80  RCDRAKEVLDEMLQMGLSPDTATY-----------------------------------N 104
             +++++VL EM      P+  TY                                    
Sbjct: 551 LWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLK 610

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           TL++   + + ++E E  F E+  +G +PDI + + ++ I+ R   + +       +K +
Sbjct: 611 TLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDS 670

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  P    Y  ++  Y R     ++  +  E++ KG   D++++NT++   CR   + EA
Sbjct: 671 GFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEA 730

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +F EM + G+ PD  T+ T I  +  D    +A+++   M +   KP+  TYN+LID 
Sbjct: 731 SRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDW 790

Query: 285 FCKVGEMEKANKLWADMISRKISPN 309
           FCK+   ++A+   +++  R + P+
Sbjct: 791 FCKLNRRDEASSFISNL--RNLDPS 813


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 242/455 (53%), Gaps = 5/455 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++   K   I  A +   EM  K + PD +T+NTL+  + R G  E+  +L+  +S  G
Sbjct: 399 MISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSG 458

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L       +  + GLC  GR D A ++L+ +L  G+ P    +N+++           A 
Sbjct: 459 LLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAF 518

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +  M + G+ P   + S+L+    R G LD A +   +M   G    N+ +T++++GY
Sbjct: 519 YAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGY 578

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G V  A  + +EM  +G   D V +   +NGLC + ++T+A D+F++ML +G  P+ 
Sbjct: 579 FRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNN 638

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + +LI G CK G +N+AL L   M ++ + PDI T N +I G CK G M+ A + + D
Sbjct: 639 FVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMD 698

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    +SP+ ++Y  LI+GYC    V  A  L  +M   G +P L + N  I GYC    
Sbjct: 699 MCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRK 758

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A   L +++S G+ P++++YNT+IN  V    +D A  L +K+     VP+ +T NV
Sbjct: 759 INRAVMILEELISVGIVPNTVTYNTMINA-VCNVILDHAMILTAKLLKMAFVPNTVTVNV 817

Query: 421 ILTGFCRQGRMHDSELILW--RMIEKGLNPDRSTY 453
           +L+ FC+QG    +  I W  ++ E  L+ D +T+
Sbjct: 818 LLSQFCKQGMPEKA--IFWGQKLSEIHLDFDETTH 850



 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 248/458 (54%), Gaps = 2/458 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD  +YN +INA C +G    A  L+N M   G KP + T+ ++I+  CK+G  + A++ 
Sbjct: 321 PDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKY 380

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
            DE+  MGLS +T  YN ++    +  ++S+A  +F EM  + + PD ++F+TL+    R
Sbjct: 381 FDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYR 440

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G+ +      R++  +GL+ D+ L  + + G C  G   EA+K+ + +L KG    VV 
Sbjct: 441 YGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVA 500

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA-LNLFDIM 266
           +N+I+     A +   A   +  M++ G+ P   T ++L+    + G++++A + L+D M
Sbjct: 501 FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYD-M 559

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             K      + +  L+DG+ ++G +  A  LW +M  R + P+ +++   ING C  G +
Sbjct: 560 IDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLM 619

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           T+A+ ++ +M+ KG  P     N++I G+C+ G  ++A + + +M   G+ PD  + N +
Sbjct: 620 TDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMI 679

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I G  ++  M  A      M   GL PD++TYN ++ G+C+   +  ++ ++ +M + G 
Sbjct: 680 ICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGW 739

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            PD +TY   I+G+ +   +  A    +E++  G VP+
Sbjct: 740 EPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPN 777



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 244/465 (52%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           ++ +KG  P+  T+N LI  +CR+G+      L++ M     +P V++YN +IN  C KG
Sbjct: 278 DVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKG 337

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  +L+ M++ G  P  AT+ T++   C++ N+  A + F E+   G++ + + ++
Sbjct: 338 QSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYN 397

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            +I  + +   + +A + F EM++  +VPD + +  ++ G+ R G   +  ++  ++   
Sbjct: 398 IMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVS 457

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G + D    +  + GLC A    EA  L   +L +G+ P    F ++I  +   G   +A
Sbjct: 458 GLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERA 517

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
              + IM +  + P   T ++L+    + G +++A     DMI +      +++ +L++G
Sbjct: 518 FYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDG 577

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y  +G V  A  LW EM G+G+ P  V+    I G C SG  + A +  S M+ +G  P+
Sbjct: 578 YFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPN 637

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +  YN+LI GF +   +++A  LV +M  +GL+PD+ T N+I+ G C+QGRM  +     
Sbjct: 638 NFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFM 697

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   GL+PD  TY TLI+G+    ++  A     +M   G+ PD
Sbjct: 698 DMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPD 742



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 249/477 (52%), Gaps = 3/477 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A CK+  ++ A+ +  E+E  G+  +T+ YN +I+ Y +   + +A  L   M  K 
Sbjct: 364 IIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKD 423

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T+N+L+ G  + G+ +    +L ++   GL  D++  +  +   C      EA 
Sbjct: 424 IVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAM 483

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   +  +G+ P +V+F+++I  +   G  +RA   +  M   GL P +   + ++   
Sbjct: 484 KLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISL 543

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G + EA     +M++KG  +  + +  +L+G  R   +  A+ L+NEM  RGVFPD 
Sbjct: 544 VRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDA 603

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             F   I+G C  G M  A ++F  M +K   P+   YN+LI GFCKVG++ +A KL  +
Sbjct: 604 VAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVRE 663

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R + P+  +  ++I G C  G +  A   + +M   G+ P +V+ NT+I GYC++ D
Sbjct: 664 MNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFD 723

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              AD+ + KM   G +PD  +YN  I+G+     +++A  ++ ++ + G+VP+ +TYN 
Sbjct: 724 VGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNT 783

Query: 421 ILTGFCRQGRMHDSELIL-WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           ++   C    + D  +IL  ++++    P+  T   L++    Q   ++A  +  ++
Sbjct: 784 MINAVCNV--ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKL 838



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 233/484 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  K      A   L +M + GV P+    + L     R G     ++L   +  KG
Sbjct: 224 LMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKG 283

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P  FT+N LI   C+KG     + +L  M +    PD  +YN ++  +C K   S A 
Sbjct: 284 PCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYAL 343

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G  P I +F T+I  F + G ++ A  YF E++  GL  + ++Y I+I+GY
Sbjct: 344 HLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGY 403

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + +A  + +EM  K  V D +T+NT++ G  R     + + L  ++   G+  D 
Sbjct: 404 VKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDS 463

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                 + G C  G  ++A+ L + +  K I P +V +N++I  +   G  E+A   +  
Sbjct: 464 SLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGI 523

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   ++P+  +   L+      G + EA+   Y+M+ KG   T ++   ++ GY R G 
Sbjct: 524 MVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 583

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A+   ++M   GV PD++++   ING      M  A+ + S M  +G VP+   YN 
Sbjct: 584 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 643

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ GFC+ G+++++  ++  M ++GL PD  T   +I G   Q  +K A     +M + G
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 703

Query: 481 FVPD 484
             PD
Sbjct: 704 LSPD 707



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 216/419 (51%), Gaps = 4/419 (0%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           ++L+    K      A E+L +M ++G++P+ +  + L     R  +     ++F ++ R
Sbjct: 222 DTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 281

Query: 129 RGVAPDIVSFSTLIGIFSRNG--QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           +G  P+  +F+ LI  F R G  ++  AL++   M      PD   Y I+IN  C  G  
Sbjct: 282 KGPCPNNFTFNLLILEFCRKGWTRIGEALLHV--MGKFRCEPDVYSYNIVINANCLKGQS 339

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL + + M+E GC   + T+ TI++  C+   +  A   F+E+ + G+  +   +  +
Sbjct: 340 SYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIM 399

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I G+ K  ++++A  LF+ M  K I PD +T+NTL+ G  + G+ E  N+L  D+    +
Sbjct: 400 ISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGL 459

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
             +     + + G C  G   EA +L   ++GKGI P++V+ N+II  Y  +G   +A  
Sbjct: 460 LHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFY 519

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               MV  G+ P S + ++L+   VR+ ++D+A+  +  M ++G     + + V+L G+ 
Sbjct: 520 AYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYF 579

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           R G ++ +E +   M  +G+ PD   +   ING      + +A+    +ML++GFVP++
Sbjct: 580 RIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNN 638



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 147/311 (47%)

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           ++  + ++    EAL++  +M E G   +    + +   L RA        LF +++ +G
Sbjct: 224 LMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKG 283

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+ +TF  LI   C+ G       L  +M +   +PD+ +YN +I+  C  G+   A 
Sbjct: 284 PCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYAL 343

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            L   MI     P+  ++  +I+ +C  G+V  A + + E+   G+    +  N +I GY
Sbjct: 344 HLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGY 403

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            ++ D S+A+    +M ++ + PD I++NTL+ G  R    +    L+  +   GL+ D 
Sbjct: 404 VKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDS 463

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
              +V + G C  GR  ++  +L  ++ KG+ P    + ++I  + +    + AF  +  
Sbjct: 464 SLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGI 523

Query: 476 MLQRGFVPDDA 486
           M++ G  P  +
Sbjct: 524 MVKFGLTPSSS 534



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 113/249 (45%)

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D+    TL+    K     +AL +   M +  + P+    + L     + G+     KL+
Sbjct: 217 DYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLF 276

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            D++ +   PN  ++ +LI  +C  G       L + M     +P + S N +I   C  
Sbjct: 277 GDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLK 336

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G +S A   L+ M+  G  P   ++ T+I+ F +E N++ A     ++E+ GL  + I Y
Sbjct: 337 GQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVY 396

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N++++G+ +   +  + L+   M  K + PD  T+ TL+ GH      ++  R   ++  
Sbjct: 397 NIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSV 456

Query: 479 RGFVPDDAF 487
            G + D + 
Sbjct: 457 SGLLHDSSL 465


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 264/496 (53%), Gaps = 13/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L KD+  +     L E+++ G       +  LI AY +   +E+A +    M    
Sbjct: 97  IIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFD 156

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP VFTYN++++ + +K     A  + + ML++   P+ AT++ L+   C+      A 
Sbjct: 157 CKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNAL 216

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM++R + P+ ++++ +I    +  + D A   F  MK  G +PD+V Y  +++G+
Sbjct: 217 QMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGF 276

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EAL +     +   V+D   Y+ +++GL RA+   +A   + +M E  + PD 
Sbjct: 277 CKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDV 336

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T ++ G  K G    AL L + MT++ + PD   YN LI G+C +G +++A  L  +
Sbjct: 337 ILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLE 396

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +       +  +Y ILI G C  G V +A +++ EM   G  P++V+ N +I G+C++G+
Sbjct: 397 ISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGN 456

Query: 361 ASKADEFLSKM-----------VSEGVDP--DSISYNTLINGFVREENMDKAFALVSKME 407
             KA     KM           +S+G +   D+ S  T++        + KA+ ++ ++ 
Sbjct: 457 IEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLT 516

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           + G  P++ITYN+++ GFC+ G ++ +  +   +  KGL+PD  TY TLING +S N  +
Sbjct: 517 DSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREE 576

Query: 468 EAFRFHDEMLQRGFVP 483
           +AF   D++L+ G  P
Sbjct: 577 DAFTVLDQILKNGCTP 592



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 233/533 (43%), Gaps = 55/533 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ +CK  K  +A     EM Q+ + P+ +TY  +I+  C+    + A++L  +M   G
Sbjct: 202 LIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHG 261

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN+L++G CK GR D A  +L    +     D   Y+ L+    R     +A+
Sbjct: 262 CIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQ 321

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             + +M+   + PD++ ++ ++   S+ G+   AL    EM   GLVPD   Y  +I GY
Sbjct: 322 VWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGY 381

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA  +  E+ +  C     TY  ++ G+CR+ ++ +A  +FNEM + G +P  
Sbjct: 382 CDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSV 441

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIM---------------------------------- 266
            TF  LI G CK GN+ KA  LF  M                                  
Sbjct: 442 VTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCD 501

Query: 267 --------------TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
                         T     P+I+TYN LI GFCK G +  A KL+ ++  + +SP+ ++
Sbjct: 502 SGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVT 561

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           YG LING  S     +AF +  +++  G  P      + +   CR    + A     K +
Sbjct: 562 YGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYL 621

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVS---KMENQGLVPDVITYNVILTGFCRQG 429
                 DS    ++   F + E  +    L+    K+ +  L P    Y + L G C+ G
Sbjct: 622 RSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAP----YTIWLIGLCQAG 677

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           R+ ++  I + + E  +     +   LI   +   NL  A       + +G++
Sbjct: 678 RLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYM 730


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 254/466 (54%), Gaps = 6/466 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+++  K   ++       EM+++ +    VTYN LIN + + G +EEA +    M   G
Sbjct: 281 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 340

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                +++N LI G CK+G  D A  V DEML  G+ P T+TYN  +   C    + +A 
Sbjct: 341 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 400

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M+    APD+VS++TL+  + + G+   A + F ++++  + P  V Y  +I+G 
Sbjct: 401 ELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 456

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G +  A ++++EM  +    DV+TY T++ G  +   L+ A ++++EML +G+ PD 
Sbjct: 457 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 516

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK-PDIVTYNTLIDGFCKVGEMEKANKLWA 299
           Y +TT   G  + G+ +KA  L + M       PD+  YN  IDG CKVG + KA +   
Sbjct: 517 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 576

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            +    + P++++Y  +I GY   G    A  L+ EM+ K + P++++   +I G+ ++G
Sbjct: 577 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 636

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A ++ ++M   GV P+ +++N L+ G  +  N+D+A+  + KME +G+ P+  +Y 
Sbjct: 637 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 696

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ++++  C   +  +   +   M++K + PD  T+  L   H+ +++
Sbjct: 697 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK-HLEKDH 741



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 252/465 (54%), Gaps = 5/465 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G+ P  +T+NT++++  + G LE   ++   M  + ++    TYN LING  K G+
Sbjct: 266 MIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGK 325

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A+    +M + G +    ++N L+   C++    +A  +  EM   G+ P   +++ 
Sbjct: 326 MEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNI 385

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I      G++D A    RE+ S+   PD V Y  +++GY + G  +EA  + D++    
Sbjct: 386 YICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD 441

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
               +VTYNT+++GLC +  L  A  L  EM  + +FPD  T+TTL+ G  K+GN++ A 
Sbjct: 442 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMAT 501

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILING 319
            ++D M +K IKPD   Y T   G  ++G+ +KA +L  +M++    +P+   Y + I+G
Sbjct: 502 EVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDG 561

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G++ +A     ++   G+ P  V+  T+I+GY  +G    A     +M+ + + P 
Sbjct: 562 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 621

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I+Y  LI G  +   +++AF   ++M+ +G+ P+V+T+N +L G C+ G + ++   L 
Sbjct: 622 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 681

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +M E+G+ P++ +YT LI+ +      +E  + + EML +   PD
Sbjct: 682 KMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 726



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/446 (32%), Positives = 229/446 (51%), Gaps = 5/446 (1%)

Query: 40  YCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD 99
           Y ++   E+       M  KG  P V   N ++  L      ++A  V + M++ G+ P 
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
             T+NT+L    +  ++   ++I+ EM RR +    V+++ LI  FS+NG+++ A  +  
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 334

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           +M+ +G       +  +I GYC+ G   +A  + DEML  G      TYN  +  LC   
Sbjct: 335 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 394

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            + +A +L + M      PD  ++ TL+HG+ K G   +A  LFD +    I P IVTYN
Sbjct: 395 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 450

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           TLIDG C+ G +E A +L  +M ++ I P+ I+Y  L+ G+   G+++ A  ++ EM+ K
Sbjct: 451 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 510

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDSISYNTLINGFVREENMDK 398
           GIKP   +  T   G  R GD+ KA     +MV ++   PD   YN  I+G  +  N+ K
Sbjct: 511 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 570

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A     K+   GLVPD +TY  ++ G+   G+   +  +   M+ K L P   TY  LI 
Sbjct: 571 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 630

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GH     L++AF++  EM +RG  P+
Sbjct: 631 GHAKAGRLEQAFQYSTEMKKRGVRPN 656


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 252/499 (50%), Gaps = 21/499 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K D A   +  M +KG  PDT TY+ +I   C    +E+AF L   M   G+ P 
Sbjct: 430 LCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPD 489

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  LI+  CK G  ++A+   DEM  +G SP   TY  LL    + + + +A +IF 
Sbjct: 490 VYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFH 549

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M   G AP+ +++S L+    + G+  +A                  YF    +  + P
Sbjct: 550 RMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAP 609

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +I+G C+   V++A ++ D M   GC  + + Y+ +++G C+   L  A ++F
Sbjct: 610 NVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVF 669

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
             M + G  P  +T+T+LI    KD  ++ A+ +   M + S  P++VTY  +IDG C++
Sbjct: 670 FRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRI 729

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           GE +KA KL + M  R  +PN ++Y  LI+G    G V  + +L+ +M+ +G  P  V+ 
Sbjct: 730 GECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTY 789

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C +G   +A   LS+M           Y +++ GF ++     +  L+ ++E+
Sbjct: 790 RVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKK--FIASLGLLEELES 847

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE--KGLN-PDRSTYTTLINGHVSQNN 465
            G+V     Y +++  F + GR+  +  +   M+E    LN   + TYT+LI      + 
Sbjct: 848 HGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQ 907

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           L++AF  + E+ ++G VP+
Sbjct: 908 LEKAFELYSEITRKGVVPE 926



 Score =  237 bits (605), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 236/506 (46%), Gaps = 22/506 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L +    D A  FL  M      P+ VTY TL+  + ++  L    ++++ M  +G
Sbjct: 280 MISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEG 339

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE-- 118
             P    +NSL++  C       A ++L+ M   G  P    YN  +   C  E +    
Sbjct: 340 CNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPD 399

Query: 119 ----AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
               AE+++ EM       + V+ +         G+ D+A    + M   G VPD   Y+
Sbjct: 400 LLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYS 459

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I   C    V +A  +  EM   G + DV TY  +++  C+  ++ +A   F+EM   
Sbjct: 460 KVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESV 519

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P   T+T L+H + K   + +A ++F  M      P+ +TY+ L+DG CK GE +KA
Sbjct: 520 GCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKA 579

Query: 295 NKLWADMI----------------SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            +++A MI                +  I+PN ++YG LI+G C    V +A  L   M  
Sbjct: 580 CEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSS 639

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G +P  +  + +I G+C+ G    A E   +M   G  P   +Y +LI+   ++  +D 
Sbjct: 640 NGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDL 699

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  ++S+M      P+V+TY  ++ G CR G    +  +L  M ++G NP+  TYT+LI+
Sbjct: 700 AIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLID 759

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G      +  + +   +M+ +G  P+
Sbjct: 760 GLGKSGKVDMSLQLFTQMITQGCAPN 785



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 227/538 (42%), Gaps = 54/538 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V   C+      A   L  ++  G  P   TYN L+      G ++  F++   MS  G
Sbjct: 178 IVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELG 237

Query: 61  LKPGVFTYNSLINGLCKKGRC--------------------------------DRAKEVL 88
                FT       LCK+GR                                 D A   L
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFL 297

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
             M      P+  TY TLL    +K+ +   + I   M   G  P+   F++L+  +   
Sbjct: 298 HRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNA 357

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN------GFVLEALKMRDEMLEKGCV 202
                A      M   G  P  V+Y I I   C          +  A K+ +EML   CV
Sbjct: 358 RDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCV 417

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           ++ V        LC      +A  +   M+ +G  PD  T++ +I   C+   + KA  L
Sbjct: 418 LNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLL 477

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F  M    + PD+ TY  LID FCKVG +E+A   + +M S   SP+ ++Y  L++ Y  
Sbjct: 478 FQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLK 537

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV---------- 372
              V +A  +++ MV  G  P  ++ + ++ G C++G++ KA E  +KM+          
Sbjct: 538 TKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDF 597

Query: 373 ------SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
                 ++ + P+ ++Y  LI+G  +   +  A  L+  M + G  P+ I Y+ ++ GFC
Sbjct: 598 YFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFC 657

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G++ +++ + +RM + G  P   TYT+LI+       L  A +   +ML+    P+
Sbjct: 658 KVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPN 715



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 220/435 (50%), Gaps = 31/435 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K  ++  A      M   G  P+T+TY+ L++  C+ G  ++A ++   M G  
Sbjct: 531 LLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTS 590

Query: 61  ----------------LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                           + P V TY +LI+GLCK  +   A+E+LD M   G  P+   Y+
Sbjct: 591 DNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYD 650

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   +  A+E+F  MS+ G  P + ++++LI    ++ +LD A+    +M  +
Sbjct: 651 ALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES 710

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V YT +I+G CR G   +ALK+   M ++GC  +VVTY ++++GL ++  +  +
Sbjct: 711 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMS 770

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             LF +M+ +G  P++ T+  LI+  C  G +++A +L   M Q      +  Y +++ G
Sbjct: 771 LQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQG 830

Query: 285 FCK-----VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           F K     +G +E+       M+S  I+P    YG+LI+ +   G + +A  L  EM+  
Sbjct: 831 FSKKFIASLGLLEELES--HGMVS--IAP---VYGLLIDSFSKAGRLEKALELHKEMMEV 883

Query: 340 GIKPTLVSCNT---IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
                + S +T   +I+  C +    KA E  S++  +GV P+  ++  LI G ++    
Sbjct: 884 SSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKW 943

Query: 397 DKAFALVSKMENQGL 411
           ++A  L   M ++G+
Sbjct: 944 NEALQLCYSMCDEGV 958



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 178/415 (42%), Gaps = 9/415 (2%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           N ++   C+ G   +A E L  +   G  P  ATYN L+        M     +  EMS 
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G   D  +         + G+   AL+    ++      D VL T +I+G        E
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALVM---IEREDFKLDTVLCTQMISGLMEASLFDE 292

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A+     M    C+ +VVTY T+L G  + K L     + + M+  G  P+   F +L+H
Sbjct: 293 AISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVH 352

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK------ANKLWADMI 302
            +C   +   A  L + M      P  V YN  I   C   E+        A K++ +M+
Sbjct: 353 SYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEML 412

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           +     N ++        C MG   +AF++   M+ KG  P   + + +I   C +    
Sbjct: 413 ASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVE 472

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           KA     +M S GV PD  +Y  LI+ F +   +++A +   +ME+ G  P V+TY  +L
Sbjct: 473 KAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALL 532

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
             + +  ++  +  I  RM++ G  P+  TY+ L++G       ++A   + +M+
Sbjct: 533 HAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMI 587



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 150/386 (38%), Gaps = 73/386 (18%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           L  +I+   CR+G   +AL+    + + G      TYN ++  L  A  +     +  EM
Sbjct: 174 LLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEM 233

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKAL-------------------------NLFD-- 264
            E G   D +T        CK+G  + AL                         +LFD  
Sbjct: 234 SELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEA 293

Query: 265 -----IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
                 M   S  P++VTY TL+ GF K  ++    ++ + M++   +PN   +  L++ 
Sbjct: 294 ISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHS 353

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS--------------------- 358
           YC+      A++L   M G G  P  V  N  I   C                       
Sbjct: 354 YCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLA 413

Query: 359 --------------------GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
                               G   KA + +  M+ +G  PD+ +Y+ +I        ++K
Sbjct: 414 SSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEK 473

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           AF L  +M++ G++PDV TY +++  FC+ G +  +      M   G +P   TYT L++
Sbjct: 474 AFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLH 533

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++    + +A      M+  G  P+
Sbjct: 534 AYLKTKQVPQASDIFHRMVDAGCAPN 559


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 229/449 (51%), Gaps = 12/449 (2%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   + + A+  + EM +    P+ VT+ T I A+C+ G L+ A QL++ M   G  P 
Sbjct: 222 LCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPD 281

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V  Y++L+NG  ++GR D A E+L+ ML     P+T  YN  L   C  +   +  ++  
Sbjct: 282 VVIYSTLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIV 338

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           EM R+   P+  +FS L     +NG +D A+    +M   G  PD V+Y  +I  +   G
Sbjct: 339 EMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQG 398

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            V +ALK+ + M    C  DV+++N  L GLCRA+   +A++L  +ML         TF 
Sbjct: 399 RVDDALKLLNSM---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFN 455

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI   C++G +N A+ +F+ M +    PDIVTY++LI+G  + G +E A +L+  M  +
Sbjct: 456 ILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK 515

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+   Y  ++ G C      +A  L   M  K   P  ++ N +I   C+ G   +A
Sbjct: 516 ---PDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRA 572

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E   +M   G  PD  +YN LINGF  +  +D A  L+S M  +   PD ++YN  L G
Sbjct: 573 IEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSYNSALKG 629

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            CR  R  ++E ++  M+     P+  T+
Sbjct: 630 LCRAERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 245/484 (50%), Gaps = 14/484 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A+  L  ++  G   D V++NTL+  YCR+G L +A + + + +G  
Sbjct: 118 LIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADA-ERLLAAAGLS 175

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V TY +LING C+ GR     + L  +  M ++PDT TYNT+L+  C      +AE
Sbjct: 176 GAANVVTYTTLINGYCRSGR---LADALALIASMPVAPDTYTYNTVLMGLCGARQWEDAE 232

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM R    P+ V+F+T I  F +NG LDRA+     M   G  PD V+Y+ ++NG+
Sbjct: 233 ALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGF 292

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G V +A+++ + ML   C  + + YN  L GLC A+   +   L  EM+ +   P+ 
Sbjct: 293 SEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNE 349

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ L    C++G ++ A+ + + M +   +PD V YNTLI  F + G ++ A KL   
Sbjct: 350 ATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNS 409

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     SP+ IS+   + G C      +A  L  +M+ +      ++ N +I   C++G 
Sbjct: 410 M---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGR 466

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E   +M   G  PD ++Y++LING   +  ++ A  L   M  +   PD+  YN 
Sbjct: 467 VNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFGYNA 523

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +L G CR  R  D+  ++  M  K   P+  T+  LIN    +  +  A    ++M + G
Sbjct: 524 VLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYG 583

Query: 481 FVPD 484
             PD
Sbjct: 584 STPD 587



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  LC   + +     + EM +K   P+  T++ L +  C+ G ++ A +++  M   G 
Sbjct: 321 LKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGC 380

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P    YN+LI    ++GR D A ++L+ M     SPD  ++N  L   CR E   +AEE
Sbjct: 381 RPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAERWDDAEE 437

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  +M R       ++F+ LI    +NG+++ A+  F +M   G  PD V Y+ +ING  
Sbjct: 438 LIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLS 497

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
             G V  A+++   M    C  D+  YN +L GLCRA    +A +L + M  +   P+  
Sbjct: 498 EQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEI 554

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           TF  LI+  C+ G +++A+ +F+ M +    PDI TYN LI+GF + G ++ A +L + M
Sbjct: 555 TFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM 614

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
             +   P+ +SY   + G C      EA  +  EM+     P  V+
Sbjct: 615 SCK---PDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVT 657



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 174/313 (55%), Gaps = 9/313 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + + LC++  +D A   L +M + G  PD V YNTLI ++  +G +++A +L+NSM    
Sbjct: 355 LTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP--- 411

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V ++N+ + GLC+  R D A+E++ +ML+        T+N L+   C+   ++ A 
Sbjct: 412 CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAI 471

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F +M + G  PDIV++S+LI   S  G ++ A+  F+ M      PD   Y  ++ G 
Sbjct: 472 EVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFGYNAVLKGL 528

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR     +A ++   M  K C  + +T+N ++N LC+  ++  A ++F +M + G  PD 
Sbjct: 529 CRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDI 588

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+  LI+G  + G ++ A  L   M   S KPD V+YN+ + G C+    ++A ++ A+
Sbjct: 589 FTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAE 645

Query: 301 MISRKISPNYISY 313
           M+  K  PN +++
Sbjct: 646 MLRMKCPPNEVTF 658



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 3/149 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC+  + + A   +  M +K   P+ +T+N LIN+ C++G ++ A ++   M   G
Sbjct: 524 VLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYG 583

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +FTYN+LING  ++GR D A+ +L     M   PD  +YN+ L   CR E   EAE
Sbjct: 584 STPDIFTYNALINGFSEQGRLDDARRLLS---TMSCKPDAVSYNSALKGLCRAERWKEAE 640

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           E+  EM R    P+ V+F     +F  NG
Sbjct: 641 EVVAEMLRMKCPPNEVTFKYANRLFVPNG 669



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 36/173 (20%)

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEG-VDPDS----------------------- 380
           +V+CN +IK  C     + A+  L  + + G  DP S                       
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAADPVSHNTLVAGYCRDGRLADAERLLAA 171

Query: 381 ---------ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
                    ++Y TLING+ R   +  A AL++ M    + PD  TYN +L G C   + 
Sbjct: 172 AGLSGAANVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQW 228

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            D+E ++  M+     P+  T+ T I        L  A +  D M Q G  PD
Sbjct: 229 EDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPD 281


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 135/384 (35%), Positives = 216/384 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+  ++  A   L +M + G  P  VT  +L+N +C+    +EA  L++SM G G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  YN++INGLCK    + A EV   M + G+  D  TYNTL+         ++A 
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +R + P+++ F+ LI  F + G L  A   ++EM    +VP+   Y  +ING+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G + +A  M D M+ KGC  DVVTYNT++ G C++K + +   LF EM  +G+  D 
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ TLIHG+C+ G +N A  +F+ M    + PDIVTYN L+D  C  G++EKA  +  D
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +   ++  + I+Y I+I G C    + EA+ L+  +  KG+KP  ++  T+I G CR G 
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479

Query: 361 ASKADEFLSKMVSEGVDPDSISYN 384
             +AD+   +M  +G  P    Y+
Sbjct: 480 QREADKLCRRMKEDGFMPSERIYD 503



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 237/440 (53%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
            ++AF L   M      P +  +  ++  + K  + D    +  +M  +G+S D  ++  
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   CR   +S A  +  +M + G  P IV+  +L+  F +  +   A+     M   G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
            VP+ V+Y  +ING C+N  +  AL++   M +KG   D VTYNT+++GL  +   T+A 
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            L  +M++R + P+   FT LI    K+GN+ +A NL+  M ++S+ P++ TYN+LI+GF
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  G +  A  ++  M+S+   P+ ++Y  LI G+C    V +  +L+ EM  +G+    
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            + NT+I GYC++G  + A +  ++MV  GV PD ++YN L++       ++KA  +V  
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ++   +  D+ITYN+I+ G CR  ++ ++  +   +  KG+ PD   Y T+I+G   +  
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
            +EA +    M + GF+P +
Sbjct: 480 QREADKLCRRMKEDGFMPSE 499



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 227/422 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  + K +K D       +ME  G+  D  ++  LI+ +CR   L  A  L+  M   G
Sbjct: 85  VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T  SL+NG C+  R   A  ++D M   G  P+   YNT++   C+  +++ A 
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M ++G+  D V+++TLI   S +G+   A    R+M    + P+ + +T +I+ +
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +LEA  +  EM+ +  V +V TYN+++NG C    L +A  +F+ M+ +G FPD 
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI G CK   +   + LF  MT + +  D  TYNTLI G+C+ G++  A K++  
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   +SP+ ++Y IL++  C+ G + +A  +  ++    +   +++ N II+G CR+  
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A      +  +GV PD+I+Y T+I+G  R+    +A  L  +M+  G +P    Y+ 
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504

Query: 421 IL 422
            L
Sbjct: 505 TL 506



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 229/454 (50%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K D A    CEM Q    P  V +  ++    +    +    L + M   G+   ++++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI+  C+  R   A  +L +M+++G  P   T  +LL   C+     EA  +   M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  P++V ++T+I    +N  L+ AL  F  M+  G+  D V Y  +I+G   +G   +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            ++  +M+++    +V+ +  +++   +   L EA +L+ EM+ R V P+ +T+ +LI+G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C  G +  A  +FD+M  K   PD+VTYNTLI GFCK   +E   KL+ +M  + +  +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y  LI+GYC  G +  A +++  MV  G+ P +V+ N ++   C +G   KA   + 
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            +    +D D I+YN +I G  R + + +A+ L   +  +G+ PD I Y  +++G CR+G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
              +++ +  RM E G  P    Y   +  H + 
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 512



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 134/250 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K+  +  A+    EM ++ V P+  TYN+LIN +C  G L +A  + + M  KG
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TYN+LI G CK  R +   ++  EM   GL  D  TYNTL+   C+   ++ A+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   GV+PDIV+++ L+     NG++++AL+   +++ + +  D + Y III G 
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   + EA  +   +  KG   D + Y T+++GLCR  +  EAD L   M E G  P  
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499

Query: 241 YTFTTLIHGH 250
             +   +  H
Sbjct: 500 RIYDETLRDH 509



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 98/198 (49%)

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           + + A  L+ +M+  +  P+ + +  ++     M        L+++M   GI   L S  
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I  +CR    S A   L KM+  G  P  ++  +L+NGF +     +A +LV  M+  
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G VP+V+ YN ++ G C+   ++++  + + M +KG+  D  TY TLI+G  +     +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 470 FRFHDEMLQRGFVPDDAF 487
            R   +M++R   P+  F
Sbjct: 239 ARLLRDMVKRKIDPNVIF 256


>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
 gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
          Length = 526

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 250/507 (49%), Gaps = 51/507 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ ++D A+  L    ++G  PD   Y+ LI +YC+ G L +A     +M   G
Sbjct: 6   VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHG 65

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++      + L+    K G          +    GL  D   YN  +   C+  NM+EA 
Sbjct: 66  IETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 125

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G+ PD + ++ LI  +   G++  A   F EM  A + PD V Y I+ +G+
Sbjct: 126 KLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGF 185

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV---- 236
           C++G V+E   + D M + G   + +TY   + G CR   L+EA+ LFN + E+G+    
Sbjct: 186 CKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIE 245

Query: 237 -------------------------------FPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                            D ++ + LI+  C+ GN+  A N+  I
Sbjct: 246 VMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKI 305

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M + ++ PD+++Y+ LI  +C+ G+M+KA+  + DM+ R +S + I Y IL+NGYC  G 
Sbjct: 306 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGR 365

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR-------SGDASKADEF---------LS 369
           + EA +L+ +M   GIKP +++   ++ G+ +        G A +   F         LS
Sbjct: 366 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 425

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M    ++PD   Y  LI+G  + E + +A  L  +M  +GL PD   Y  ++ G+C QG
Sbjct: 426 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 485

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTL 456
            +  +E +L  MI+KG+ PD  T++ L
Sbjct: 486 EISKAEDLLQEMIDKGIEPDELTFSVL 512



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 261/507 (51%), Gaps = 53/507 (10%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           + YN +++  C+E  L+EA +L+ + + +G  P V+ Y+ LI   CK G   +A +  + 
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 91  MLQMGLSPDTATYNTLLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           M+  G+  +    + LL +  RK  M SE    F +    G+  D V ++  +  + +NG
Sbjct: 61  MVSHGIETNCHIVSYLL-QCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 119

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            ++ A+    EMK  GL PD + YT +INGYC  G +  A ++ +EML+     D+VTYN
Sbjct: 120 NMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYN 179

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            + +G C++ ++ E  DL + M + G+ P+  T+   I G C+ GN+++A  LF+++ +K
Sbjct: 180 ILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEK 239

Query: 270 SIKPDIVTYNTLIDGF-----------------------------------CKVGEMEKA 294
            I    V Y++++ G+                                   C+VG ++ A
Sbjct: 240 GIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGA 299

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
           + +   M+   + P+ ISY  LI+ YC  G + +A   +++MV +G+   ++    ++ G
Sbjct: 300 SNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNG 359

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE------ENMDK---AF----- 400
           YC++G   +A +   +M + G+ PD I+Y  L++G ++E      E + K   +F     
Sbjct: 360 YCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRAN 419

Query: 401 --ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
              L+S M++  + PDV  Y V++ G C+   + ++  +   M++KGL PD   YT LIN
Sbjct: 420 HNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALIN 479

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G+ SQ  + +A     EM+ +G  PD+
Sbjct: 480 GYCSQGEISKAEDLLQEMIDKGIEPDE 506



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 221/411 (53%), Gaps = 16/411 (3%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++  CK+  ++ A   L EM+  G+ PD + Y  LIN YC +G ++ A Q+   M    +
Sbjct: 112 MDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANI 171

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P + TYN L +G CK G      ++LD M   GL P++ TY   +V  CR  N+SEAE 
Sbjct: 172 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEV 231

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F  +  +G+    V +S+++  +  +G  D A M F  +   G + D+   + +IN  C
Sbjct: 232 LFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLC 291

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R G V  A  +   MLE   V DV++Y+ +++  C+   + +A   F++M++RG+  D  
Sbjct: 292 RVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVI 351

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK---------VGEME 292
            +T L++G+CK G + +A  LF  MT   IKPD++ Y  L+DG  K         + +  
Sbjct: 352 VYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKER 411

Query: 293 KA-------NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           ++       NKL + M   +I P+   Y +LI+G C   ++ EA  L+ EM+ KG+ P  
Sbjct: 412 RSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDA 471

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
            +   +I GYC  G+ SKA++ L +M+ +G++PD ++++ L    +R   +
Sbjct: 472 YAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKI 522


>gi|218184750|gb|EEC67177.1| hypothetical protein OsI_34045 [Oryza sativa Indica Group]
          Length = 755

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 262/454 (57%), Gaps = 9/454 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            ++ L N+Y R   + +A  +++ MS   ++  VFTY+SL++GL      + A E+ +EM
Sbjct: 171 VWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGL---RMTNVALELFEEM 227

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              G+SP   +++ ++   C   +M EA ++F  +++ G+  +IV++++LI  +   G  
Sbjct: 228 ESCGVSPSEYSHSIIINGLC---SMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLT 284

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
                  + M+  G+ PD V YTI+I G+C +G V E +K+R ++L++G  +++VTY+ +
Sbjct: 285 KEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVL 344

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM-TQKS 270
           LN L +  M  E D+L  E+   G+  D   ++ LIHG+CK G + KAL + + M + + 
Sbjct: 345 LNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQR 404

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP-NYISYGILINGYCSMGHVTEA 329
           + P  + + +++ G CK G + +A + + + ++RK  P + + Y ++I+GY  +G +  A
Sbjct: 405 VMPTSLNHFSILLGLCKKGLLVEA-RWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNA 463

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            RL+ ++   G+ PT+V+CN+++ GYC+ GD   A+ +   +   G+ P +++Y TL++ 
Sbjct: 464 VRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDA 523

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
                 ++   +L  +M  + +  + +TY+V++ G C+Q R  ++  +L  M  KG+N D
Sbjct: 524 LSEAGEVNTMLSLFDEMVAKRIKANAVTYSVVVKGLCKQLRFDEAINVLKDMDSKGINAD 583

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             TY TLI G     N++ AF  HD ML RG VP
Sbjct: 584 PITYNTLIQGFCESENVQMAFHIHDIMLCRGLVP 617



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 241/463 (52%), Gaps = 4/463 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EME  GV P   +++ +IN  C    +EEA  L   ++ +G++  + TYNSLING    G
Sbjct: 226 EMESCGVSPSEYSHSIIINGLCS---MEEALDLFERVTKEGMELEIVTYNSLINGYRLLG 282

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
                 +++  M   G+ PD  TY  L+   C   ++ E  ++  ++  +G+  +IV++S
Sbjct: 283 LTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYS 342

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            L+    + G          E+ + GL  D + Y+I+I+GYC+ G + +AL++ + M   
Sbjct: 343 VLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSS 402

Query: 200 GCVMDV-VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
             VM   + + +IL GLC+  +L EA      +  +    D   +  +I G+ K G++  
Sbjct: 403 QRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVN 462

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A+ L+D +T   + P IVT N+L+ G+CK+G+++ A   +  +    + P  ++Y  L++
Sbjct: 463 AVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMD 522

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
                G V     L+ EMV K IK   V+ + ++KG C+     +A   L  M S+G++ 
Sbjct: 523 ALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVVVKGLCKQLRFDEAINVLKDMDSKGINA 582

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           D I+YNTLI GF   EN+  AF +   M  +GLVP  +TYN+++   C +G++  +E++L
Sbjct: 583 DPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILL 642

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
             + E G+   +  YTTLI    ++     A     ++L  GF
Sbjct: 643 ESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGF 685



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 237/501 (47%), Gaps = 41/501 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC    ++ A      + ++G+  + VTYN+LIN Y   G  +E  +++  M G+G
Sbjct: 242 IINGLCS---MEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQG 298

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TY  LI G C+ G  +   +V  ++L  GL  +  TY+ LL    +K    E +
Sbjct: 299 VEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEID 358

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV------------- 167
            +  E+   G+  D++++S LI  + + G++++AL     M S+  V             
Sbjct: 359 NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLG 418

Query: 168 -----------------------PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
                                   D V Y ++I+GY + G ++ A+++ D++   G    
Sbjct: 419 LCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPT 478

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +VT N++L G C+   L  A+  F  +   G+ P   T+TTL+    + G +N  L+LFD
Sbjct: 479 IVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFD 538

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K IK + VTY+ ++ G CK    ++A  +  DM S+ I+ + I+Y  LI G+C   
Sbjct: 539 EMVAKRIKANAVTYSVVVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESE 598

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           +V  AF +   M+ +G+ PT V+ N +I   C  G   +A+  L  +   G+     +Y 
Sbjct: 599 NVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFAYT 658

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI     +     A  LV K+ + G    +  ++  +   C++    ++ + +  M+  
Sbjct: 659 TLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAKEAFMFVPIMLSV 718

Query: 445 GLNPDRSTYTTLINGHVSQNN 465
           G+ PD   Y  L  G   Q N
Sbjct: 719 GIYPDTQIYCVL--GRALQKN 737



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 179/327 (54%), Gaps = 12/327 (3%)

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
           FRE  S G V D      + N Y R   V +AL +  +M      + V TY+++L+GL  
Sbjct: 162 FRECDSNGCVWDA-----LANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGL-- 214

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
            +M   A +LF EM   GV P  Y+ + +I+G C   +M +AL+LF+ +T++ ++ +IVT
Sbjct: 215 -RMTNVALELFEEMESCGVSPSEYSHSIIINGLC---SMEEALDLFERVTKEGMELEIVT 270

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           YN+LI+G+  +G  ++  K+   M  + + P+ ++Y ILI G+C  G V E  ++  +++
Sbjct: 271 YNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVL 330

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            +G++  +V+ + ++    + G   + D  L ++ + G+D D I+Y+ LI+G+ +   ++
Sbjct: 331 DQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIE 390

Query: 398 KAFALVSKM-ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           KA  + + M  +Q ++P  + +  IL G C++G + ++   L  +  K    D   Y  +
Sbjct: 391 KALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVV 450

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVP 483
           I+G+    ++  A R +D++   G  P
Sbjct: 451 IDGYAKLGDIVNAVRLYDQITVAGMHP 477



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C+   +  A      M  +G+ P  VTYN LIN  C +G + +A  L+ S+   G
Sbjct: 590 LIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENG 649

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K   F Y +LI   C KG    A  ++ ++L  G       ++  +   C+++   EA 
Sbjct: 650 IKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAKEAF 709

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
                M   G+ PD   +  L     +N +L
Sbjct: 710 MFVPIMLSVGIYPDTQIYCVLGRALQKNSEL 740



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 9/126 (7%)

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           RSG A+   + L     E  D +   ++ L N + R + +  A  ++SKM +  +   V 
Sbjct: 147 RSGSAAALCDILWNRFRE-CDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVF 205

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           TY+ +L G     RM +  L L+  +E  G++P   +++ +ING  S   ++EA    + 
Sbjct: 206 TYDSLLHGL----RMTNVALELFEEMESCGVSPSEYSHSIIINGLCS---MEEALDLFER 258

Query: 476 MLQRGF 481
           + + G 
Sbjct: 259 VTKEGM 264


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 269/483 (55%), Gaps = 27/483 (5%)

Query: 8   DHKIDS--AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           DH++ S    + +C+     V  +++  + L+ AY      E  F+        G K   
Sbjct: 133 DHQVHSIFHAISMCD----NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSA 188

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            +   L+  L K+ R    + +  EM++  + P+  T+N ++   C+   M++A ++  +
Sbjct: 189 MSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED 248

Query: 126 MSRRGVAPDIVSFSTLIGIFSR---NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           M   G +P++VS++TLI  + +   NG++ +A    +EM    + P+   + I+I+G+ +
Sbjct: 249 MKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWK 308

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           +  +  +LK+  EML++  + +V+TYN+++NGLC    + EA  + ++M+  GV P+  T
Sbjct: 309 DDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLIT 368

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           + +LI+G CK+G M +AL++FD +  +  +P    YN LID +CK+G+++    L  +M 
Sbjct: 369 YHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              I P+  +Y  LI G C  G++  A +L+ ++  KG+ P LV+ + +++GYC  G++ 
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESR 487

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ-GLVPDVITYNVI 421
           KA   L +M   G+ P  ++YN ++ G+ +E N+  A  + ++ME +  L  +V +YNV+
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L G+ ++G++ D+ ++L  M+EKGL P+R TY  +                 +EM+ +GF
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV----------------KEEMVDKGF 591

Query: 482 VPD 484
           VPD
Sbjct: 592 VPD 594



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 137/414 (33%), Positives = 234/414 (56%), Gaps = 28/414 (6%)

Query: 52  LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC 111
           L   M  + ++P VFT+N +IN LCK G+ ++A++V+++M   G SP+  +YNTL+   C
Sbjct: 210 LYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYC 269

Query: 112 R---KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
           +      M +A+ +  EM    V+P++ +F+ LI  F ++  L  +L  F+EM    ++P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + + Y  +ING C  G + EA+ MRD+M+  G   +++TY++++NG C+  M+ EA D+F
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
           + +  +G  P    +  LI  +CK G ++    L + M ++ I PD+ TYN LI G C+ 
Sbjct: 390 DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G +E A KL+ D ++ K  P+ +++ IL+ GYCS G   +A  L  EM   G+KP  ++ 
Sbjct: 450 GNIEAAKKLF-DQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKME 407
           N ++KGYC+ G+   A    ++M  E  +  +  SYN L+ G+ ++  ++ A  L+++M 
Sbjct: 509 NIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
            +GLVP+ ITY                E++   M++KG  PD       I GH+
Sbjct: 569 EKGLVPNRITY----------------EIVKEEMVDKGFVPD-------IEGHL 599



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 227/402 (56%), Gaps = 10/402 (2%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           AL K ++    +    EM ++ + P+  T+N +INA C+ G + +A  +M  M   G  P
Sbjct: 197 ALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSP 256

Query: 64  GVFTYNSLINGLCK---KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            V +YN+LI+G CK    G+  +A  VL EM++  +SP+  T+N L+    + +N+  + 
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSL 316

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  + V P+++++++LI      G+++ A+    +M SAG+ P+ + Y  +ING+
Sbjct: 317 KVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGF 376

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+NG + EAL M D +  +G       YN +++  C+   + +   L  EM   G+ PD 
Sbjct: 377 CKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G C++GN+  A  LFD +T K + PD+VT++ L++G+C  GE  KA  L  +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKE 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG-KGIKPTLVSCNTIIKGYCRSG 359
           M    + P +++Y I++ GYC  G++  A  +  +M   + ++  + S N +++GY + G
Sbjct: 496 MSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
               A+  L++M+ +G+ P+ I+Y       V+EE +DK F 
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYE-----IVKEEMVDKGFV 592



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 195/351 (55%), Gaps = 5/351 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR---EGFLEEAFQLMNSMS 57
           ++NALCK  K++ A+  + +M+  G  P+ V+YNTLI+ YC+    G + +A  ++  M 
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
              + P + T+N LI+G  K      + +V  EML   + P+  TYN+L+   C    ++
Sbjct: 289 ENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKIN 348

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA  +  +M   GV P+++++ +LI  F +NG +  AL  F  +K  G  P   +Y ++I
Sbjct: 349 EAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLI 408

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           + YC+ G + +   +++EM  +G V DV TYN ++ GLCR   +  A  LF+++  +G+ 
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL- 467

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  TF  L+ G+C  G   KA  L   M++  +KP  +TYN ++ G+CK G ++ A  +
Sbjct: 468 PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNM 527

Query: 298 WADM-ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
              M   R++  N  SY +L+ GY   G + +A  L  EM+ KG+ P  ++
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 251/487 (51%), Gaps = 1/487 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ + K  +++ A+    EM ++G   D  +   ++   C EG +EE  +L+    GKG
Sbjct: 176 LLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKG 235

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +  YN++I G CK G  + AK V  E+   G  P   T+ T++   C+K +   ++
Sbjct: 236 CVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASD 295

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E+  RG+   +   + +I    R+G         R + +    PD   Y I+IN  
Sbjct: 296 RLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRL 355

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    A  + DE  +KG ++  ++Y  ++   C++K    A  L  ++ ERG  PD 
Sbjct: 356 CKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDI 415

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LIHG    G+M+ A+N+   +  + + PD   YN L+ G CK G    A  L+++
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R I P+   Y  LI+G+   G   EA +++   V KG+K  +V  N +IKG+CRSG 
Sbjct: 476 MLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGM 535

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   +++M  E + PD  +Y+T+I+G+V++++M  A  +   ME     P+V+TY  
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTS 595

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRFHDEMLQR 479
           ++ GFC QG    +E     M  + L P+  TYTTLI     +++ L++A  + + M+  
Sbjct: 596 LINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTN 655

Query: 480 GFVPDDA 486
             VP++ 
Sbjct: 656 KCVPNEV 662



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 263/534 (49%), Gaps = 50/534 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV  +C + K++  +  + +   KG  P+ V YNT+I  YC+ G +E A  +   +  KG
Sbjct: 211 MVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKG 270

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL------------------------ 96
             P + T+ ++ING CKKG    +  +L+E+ + GL                        
Sbjct: 271 FMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPA 330

Query: 97  -----------SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                       PD ATYN L+   C++     A  +  E S++G+    +S++ LI  +
Sbjct: 331 ESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAY 390

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            ++ + D A     ++   G  PD V Y I+I+G   +G + +A+ M+ +++++G   D 
Sbjct: 391 CKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN +++GLC+      A  LF+EML+R + PD Y + TLI G  + G+ ++A  +F +
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTL 510

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
             +K +K D+V +N +I GFC+ G +++A      M    + P+  +Y  +I+GY     
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A +++ +M     KP +V+  ++I G+C  GD S A+E   +M S  + P+ ++Y T
Sbjct: 571 MATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTT 630

Query: 386 LINGFVREEN-MDKAFALVSKMENQGLVPDVITYNVILTGFCRQ--GRM--------HDS 434
           LI  F +E + ++KA      M     VP+ +T+N +L GF ++  GR         H  
Sbjct: 631 LIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQ 690

Query: 435 ELILW----RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             + +    RM   G +   + Y +++        +K A    D M+++GF PD
Sbjct: 691 SFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPD 744



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 255/518 (49%), Gaps = 50/518 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK   I++AK+   E++ KG  P   T+ T+IN +C++G    + +L+  +  +G
Sbjct: 246 IIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERG 305

Query: 61  L-----------------------------------KPGVFTYNSLINGLCKKGRCDRAK 85
           L                                   KP + TYN LIN LCK+G+ + A 
Sbjct: 306 LRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAA 365

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +LDE  + GL     +Y  L+   C+ +    A ++  +++ RG  PDIV++  LI   
Sbjct: 366 GLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGL 425

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
             +G +D A+    ++   G+ PD  +Y ++++G C+ G  L A  +  EML++  + D 
Sbjct: 426 VVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDA 485

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y T+++G  R+    EA  +F   +E+GV  D      +I G C+ G +++AL   + 
Sbjct: 486 YVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR 545

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++ + PD  TY+T+IDG+ K  +M  A K++ DM   K  PN ++Y  LING+C  G 
Sbjct: 546 MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGD 605

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR-SGDASKADEFLSKMVSEGVDPDSISYN 384
            + A   + EM  + + P +V+  T+I+ + + S    KA  +   M++    P+ +++N
Sbjct: 606 FSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFN 665

Query: 385 TLINGFVREE-----------NMDKA---FALVSKMENQGLVPDVITYNVILTGFCRQGR 430
            L+ GFV++            N  ++   F    +M++ G       YN +L   C  G 
Sbjct: 666 CLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGM 725

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +  + ++  RM++KG +PD  ++  +++G     N K+
Sbjct: 726 VKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 239/450 (53%), Gaps = 1/450 (0%)

Query: 36  LINAYCREGFLEEAFQLMN-SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
           +++AY   GFL +A ++ +  +      P V   N+L++ + K  R + A++V DEM + 
Sbjct: 140 VLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCER 199

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G   D  +   ++   C +  + E  ++  +   +G  P+IV ++T+IG + + G ++ A
Sbjct: 200 GGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENA 259

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
            + F+E+K  G +P    +  +ING+C+ G  + + ++ +E+ E+G  + V   N I++ 
Sbjct: 260 KLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDA 319

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
             R     +  +    ++     PD  T+  LI+  CK+G    A  L D  ++K +   
Sbjct: 320 KYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILT 379

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
            ++Y  LI  +CK  E + A+KL   +  R   P+ ++YGILI+G    GH+ +A  +  
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           +++ +G+ P     N ++ G C++G    A    S+M+   + PD+  Y TLI+GF+R  
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSG 499

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           + D+A  + +    +G+  DV+ +N ++ GFCR G + ++   + RM E+ L PD+ TY+
Sbjct: 500 DFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           T+I+G+V Q ++  A +   +M +    P+
Sbjct: 560 TIIDGYVKQQDMATAIKIFRDMEKNKCKPN 589



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 165/312 (52%), Gaps = 1/312 (0%)

Query: 176 IINGYCRNGFVLEALKMRDEMLE-KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           +++ Y  +GF+ +A+++ D ++E    V DV+  N +L+ + +++ L +A  +++EM ER
Sbjct: 140 VLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCER 199

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G   D Y+   ++ G C +G + +   L +    K   P+IV YNT+I G+CK+G++E A
Sbjct: 200 GGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENA 259

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             ++ ++  +   P   ++G +ING+C  G    + RL  E+  +G++  +   N II  
Sbjct: 260 KLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDA 319

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             R G      E +  +V+    PD  +YN LIN   +E   + A  L+ +   +GL+  
Sbjct: 320 KYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILT 379

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            ++Y  ++  +C+      +  +L ++ E+G  PD  TY  LI+G V   ++ +A     
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439

Query: 475 EMLQRGFVPDDA 486
           +++ RG  PD A
Sbjct: 440 KLIDRGVSPDAA 451



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 50/312 (16%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +   AK+   EM  + + PD   Y TLI+ + R G  +EA ++      KG
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKG 515

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V  +N++I G C+ G  D A   ++ M +  L PD  TY+T++    ++++M+ A 
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF +M +    P++V++++LI  F   G    A   F+EM+S  LVP+ V YT +I  +
Sbjct: 576 KIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSF 635

Query: 181 CRNGFVLE-ALKMRDEMLEKGCVMDVVTYNTILNG------------------------- 214
            +    LE A+   + M+   CV + VT+N +L G                         
Sbjct: 636 AKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFF 695

Query: 215 ------------------------LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
                                   LC   M+  A  L + M+++G  PD  +F  ++HG 
Sbjct: 696 EFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGF 755

Query: 251 CKDGNMNKALNL 262
           C  GN  +  N+
Sbjct: 756 CVVGNSKQWRNM 767



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 50/285 (17%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C+   +D A   +  M ++ + PD  TY+T+I+ Y ++  +  A ++   M    
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNK 585

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY SLING C +G    A+E   EM    L P+  TY TL+    ++ +  E  
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKA 645

Query: 121 EIFCE-MSRRGVAPDIVSFSTLIGIFSR--------------NGQLDRALMYFREMKS-- 163
             + E M      P+ V+F+ L+  F +              +GQ      +F  MKS  
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDG 705

Query: 164 ---------------------------------AGLVPDNVLYTIIINGYCRNGFVLEAL 190
                                             G  PD V +  I++G+C  G   +  
Sbjct: 706 WSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWR 765

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
            M    L++  +   V Y+ +L       ++ EA  + + M+E+ 
Sbjct: 766 NMDFRNLDEKGLEVAVRYSRVLEQHLPKAVICEASTILHAMVEKA 810



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 29/142 (20%), Positives = 66/142 (46%), Gaps = 1/142 (0%)

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           +C++ +K   R    ++ ++ L  + +E V     + + +++ +     + KA  +   +
Sbjct: 101 ACSSFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYV 160

Query: 407 -ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
            E    VPDVI  N +L+   +  R+ D+  +   M E+G   D  +   ++ G  S+  
Sbjct: 161 VELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGK 220

Query: 466 LKEAFRFHDEMLQRGFVPDDAF 487
           ++E  +  ++   +G VP+  F
Sbjct: 221 VEEGRKLIEDRWGKGCVPNIVF 242


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 249/495 (50%), Gaps = 36/495 (7%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            M  +G+ P   T++ L+ A  +    E    L+  M   GLKP ++TY   I  L + G
Sbjct: 219 RMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAG 278

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R D A  ++  M   G  PD  TY  L+   C    + +A E+F +M      PD V++ 
Sbjct: 279 RIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYI 338

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T++  FS  G L R   ++ EM++ G  PD + +TI++N  C+ G + EA  + D M ++
Sbjct: 339 TMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQ 398

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G + ++ TYNT+++GL R   L +A DLFN M   GV P  YT+   I  + K G  +KA
Sbjct: 399 GVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKA 458

Query: 260 LNLFDIMTQKSIKPDI-----------------------------------VTYNTLIDG 284
           L  F+ M  + I P+I                                   VTYN ++  
Sbjct: 459 LETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKC 518

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           + K G++++A +L +DM   +  P+ I    LIN     G V EA++++  +    + PT
Sbjct: 519 YSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPT 578

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           +V+ NT+I G  + G   +A E  + M   G  P++I++NT+++   + + +D A  ++ 
Sbjct: 579 VVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLY 638

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           KM     +PDV+T+N I+ G   + R+ D+ + L+  ++K L PD  T  TL+ G V   
Sbjct: 639 KMTTMNCMPDVLTFNTIIHGLVIEKRVSDA-IWLFHQMKKMLTPDCVTLCTLLPGVVKNG 697

Query: 465 NLKEAFRFHDEMLQR 479
            +++AF+  ++ + R
Sbjct: 698 LMEDAFKIAEDFVHR 712



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 244/477 (51%), Gaps = 2/477 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  L +  +ID A   +  ME  G  PD VTY  LI+A C  G L++A +L   M     
Sbjct: 271 IRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSH 330

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP   TY ++++     G   R KE   EM   G +PD  T+  L+   C+  N+ EA  
Sbjct: 331 KPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFH 390

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +   M ++GV P++ +++TLI    R  +LD AL  F  M++ G+VP    Y + I+ Y 
Sbjct: 391 LLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYG 450

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++G   +AL+  ++M  +G   ++V  N  L  L     L EA  +FN +   G+ PD  
Sbjct: 451 KSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSV 510

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  ++  + K G +++A+ L   M++   +PDI+  N+LI+   K G +++A K++  +
Sbjct: 511 TYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRL 570

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
              K++P  ++Y  LI G    G V  A  L+  M G G  P  ++ NTI+   C++ + 
Sbjct: 571 KDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEV 630

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A + L KM +    PD +++NT+I+G V E+ +  A  L  +M+   L PD +T   +
Sbjct: 631 DLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTL 689

Query: 422 LTGFCRQGRMHDSELILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           L G  + G M D+  I    + + G+  DR  +  L+ G ++Q   ++   F D ++
Sbjct: 690 LPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLV 746



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 237/465 (50%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M + G + +  +YN LI+   + G   EA ++   M  +GLKP + T+++L+    K+ 
Sbjct: 184 KMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRR 243

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             +  K +L+EM  +GL P+  TY   +    R   + EA  I   M   G  PD+V+++
Sbjct: 244 DTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYT 303

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI      G+LD A+  F +MK++   PD V Y  +++ +   G +    +   EM   
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEAD 363

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   DV+T+  ++N LC+A  + EA  L + M ++GV P+ +T+ TLI G  +   ++ A
Sbjct: 364 GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA 423

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           L+LF+ M    + P   TY   ID + K G  +KA + +  M  R I+PN ++    +  
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYS 483

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
              MG + EA  ++  +   G+ P  V+ N ++K Y ++G   +A E LS M     +PD
Sbjct: 484 LAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD 543

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I  N+LIN   +   +D+A+ +  ++++  L P V+TYN ++ G  ++G++  +  +  
Sbjct: 544 IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFA 603

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   G  P+  T+ T+++     + +  A +   +M     +PD
Sbjct: 604 SMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPD 648



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 229/464 (49%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M+ + +  D  TY  +       G L +       M   G     ++YN LI+ L + G 
Sbjct: 150 MQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGL 209

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
           C  A E+   M+  GL P   T++ L+V + ++ +    + +  EM   G+ P+I +++ 
Sbjct: 210 CREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTI 269

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I +  R G++D A    + M+  G  PD V YT++I+  C  G + +A+++  +M    
Sbjct: 270 CIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS 329

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D VTY T+L+       L    + ++EM   G  PD  TFT L++  CK GN+++A 
Sbjct: 330 HKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAF 389

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           +L D+M ++ + P++ TYNTLI G  +V  ++ A  L+ +M +  + P   +Y + I+ Y
Sbjct: 390 HLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFY 449

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G   +A   + +M  +GI P +V+CN  +      G   +A    +++ S G+ PDS
Sbjct: 450 GKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDS 509

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YN ++  + +   +D+A  L+S M      PD+I  N ++    + GR+ ++  +  R
Sbjct: 510 VTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCR 569

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + +  L P   TY TLI G   +  ++ A      M   G  P+
Sbjct: 570 LKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPN 613



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/558 (27%), Positives = 248/558 (44%), Gaps = 73/558 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VNALCK   ID A   L  M ++GV P+  TYNTLI+   R   L++A  L N+M   G
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEM-------------------LQMG------ 95
           + P  +TY   I+   K GR D+A E  ++M                    +MG      
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAK 494

Query: 96  ----------LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                     L+PD+ TYN ++    +   + EA E+  +MS     PDI+  ++LI   
Sbjct: 495 VIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTL 554

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G++D A   F  +K   L P  V Y  +I G  + G V  A+++   M   GC  + 
Sbjct: 555 YKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNT 614

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +T+NTIL+ LC+   +  A  +  +M      PD  TF T+IHG   +  ++ A+ LF  
Sbjct: 615 ITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQ 674

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL----------------WADMISRKISPN 309
           M +K + PD VT  TL+ G  K G ME A K+                W D++   ++  
Sbjct: 675 M-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQA 733

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGK---------------------GIKPTLVSC 348
                IL       G V +   +   ++                       G+KPTL S 
Sbjct: 734 GTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESY 793

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N +I+G+    +   A    ++M + G  PD  +YN L++   +   +++ F L  +M  
Sbjct: 794 NFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMIC 853

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
               P+ IT+N+I+    +   +  +  + + ++    +P   TY  L++G +    L+E
Sbjct: 854 SSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEE 913

Query: 469 AFRFHDEMLQRGFVPDDA 486
           A    +EM+  G  P++A
Sbjct: 914 AKELFEEMVDYGCRPNNA 931



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 237/521 (45%), Gaps = 38/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC   K+D A     +M+     PD VTY T+++ +   G L    +  + M   G
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+  L+N LCK G  D A  +LD M + G+ P+  TYNTL+    R   + +A 
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M   GV P   ++   I  + ++G+ D+AL  F +MK  G+ P+ V     +   
Sbjct: 425 DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL 484

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + EA  + + +   G   D VTYN ++    +A  + EA +L ++M E    PD 
Sbjct: 485 AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDI 544

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
               +LI+   K G +++A  +F  +    + P +VTYNTLI G  K G++++A +L+A 
Sbjct: 545 IVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFAS 604

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN I++  +++  C    V  A ++ Y+M      P +++ NTII G      
Sbjct: 605 MTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ----------- 409
            S A     +M  + + PD ++  TL+ G V+   M+ AF +     ++           
Sbjct: 665 VSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWE 723

Query: 410 ----GLVPDVITYNVILTG-------FCRQGRM----------HDSELILWRMI-----E 443
               G++    T   IL G        C+ G +          H   L+   +      E
Sbjct: 724 DLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKE 783

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G+ P   +Y  LI G +  +N + A+    EM   G  PD
Sbjct: 784 LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPD 824



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 149/555 (26%), Positives = 242/555 (43%), Gaps = 71/555 (12%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++N L K  ++D A    C ++   + P  VTYNTLI    +EG ++ A +L  SM+G G
Sbjct: 550  LINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNG 609

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG------------------------- 95
              P   T+N++++ LCK    D A ++L +M  M                          
Sbjct: 610  CPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAI 669

Query: 96   ---------LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR-GVAPDIVSFSTLIG-I 144
                     L+PD  T  TLL    +   M +A +I  +   R GV  D   +  L+G I
Sbjct: 670  WLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGI 729

Query: 145  FSRNGQLDRAL-----------------------------------MYFREMKSAGLVPD 169
             ++ G     L                                   ++ R  K  G+ P 
Sbjct: 730  LTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPT 789

Query: 170  NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
               Y  +I G+        A  +  EM   GC  DV TYN +L+   ++  + E  +L+ 
Sbjct: 790  LESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYE 849

Query: 230  EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
            +M+     P+  T   +I    K  +++KAL+LF  +      P   TY  L+DG  K G
Sbjct: 850  QMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSG 909

Query: 290  EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
             +E+A +L+ +M+     PN   Y ILING+   G V  A  L+  MV +GI+P L S  
Sbjct: 910  RLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYT 969

Query: 350  TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +++   C +G    A  +  K+   G+  DSI+YN +I+G  R   +++A  L  +M+++
Sbjct: 970  SLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSR 1029

Query: 410  GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            G+ PD+ TYN ++      G +  +  +   +   GL P+  TY  LI G+    N   A
Sbjct: 1030 GINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSA 1089

Query: 470  FRFHDEMLQRGFVPD 484
            +  +  M+  G  P+
Sbjct: 1090 YAVYKRMMVGGCSPN 1104



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 232/495 (46%), Gaps = 38/495 (7%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ LCK+ ++D A   L +M      PD +T+NT+I+    E  + +A  L + M  K 
Sbjct: 620  ILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KM 678

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLD---------------EMLQMGLSPDTATYNT 105
            L P   T  +L+ G+ K G  + A ++ +               E L  G+     T  T
Sbjct: 679  LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKT 738

Query: 106  LLVES---------------------CRKENMSEAEEIFCEMSRR-GVAPDIVSFSTLIG 143
            +L                        C+ +    A+ +F   ++  GV P + S++ LI 
Sbjct: 739  ILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIE 798

Query: 144  IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
             F      + A   F EMK+AG  PD   Y ++++ + ++G + E  ++ ++M+   C  
Sbjct: 799  GFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKP 858

Query: 204  DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
            + +T+N I+  L ++  L +A DLF +++     P   T+  L+ G  K G + +A  LF
Sbjct: 859  NTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELF 918

Query: 264  DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            + M     +P+   YN LI+GF K G++  A +L+  M+   I P+  SY  L+   C  
Sbjct: 919  EEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEA 978

Query: 324  GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
            G V +A   + ++   G+    ++ N +I G  RS    +A     +M S G++PD  +Y
Sbjct: 979  GRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTY 1038

Query: 384  NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            N+LI        +++A  L  +++  GL P+V TYN ++ G+   G    +  +  RM+ 
Sbjct: 1039 NSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMV 1098

Query: 444  KGLNPDRSTYTTLIN 458
             G +P+  T+  L N
Sbjct: 1099 GGCSPNTGTFAQLPN 1113



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 193/455 (42%), Gaps = 70/455 (15%)

Query: 52  LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESC 111
           + N M  + +K  + TY  +  GL  +G   +      +M + G   +  +YN L+    
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           +     EA E++  M   G+ P + +FS L+    +    +       EM+S GL P+  
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPN-- 263

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
                                            + TY   +  L RA  + EA  +   M
Sbjct: 264 ---------------------------------IYTYTICIRVLGRAGRIDEACRIMKRM 290

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
            + G  PD  T+T LI   C  G ++ A+ LF  M   S KPD VTY T++D F   G++
Sbjct: 291 EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDL 350

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
            +  + W++M +   +P+ I++ IL+N  C  G++ EAF L   M  +G+ P L + NT+
Sbjct: 351 GRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTL 410

Query: 352 IKG-----------------------------------YCRSGDASKADEFLSKMVSEGV 376
           I G                                   Y +SG + KA E   KM   G+
Sbjct: 411 ISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGI 470

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+ ++ N  +        + +A  + +++++ GL PD +TYN+++  + + G++ ++  
Sbjct: 471 APNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIE 530

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           +L  M E    PD     +LIN       + EA++
Sbjct: 531 LLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWK 565



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 170/364 (46%), Gaps = 2/364 (0%)

Query: 122 IFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +F  M  + +  D+ ++  +  G+F R G L +    F +M+ AG   +   Y  +I+  
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGG-LRQTPFAFGKMREAGFHLNAYSYNGLIHLL 204

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G   EAL+M   M+ +G    + T++ ++    + +       L  EM   G+ P+ 
Sbjct: 205 LQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNI 264

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+T  I    + G +++A  +   M      PD+VTY  LID  C  G+++ A +L+  
Sbjct: 265 YTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVK 324

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +    P+ ++Y  +++ +   G +      W EM   G  P +++   ++   C++G+
Sbjct: 325 MKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGN 384

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L  M  +GV P+  +YNTLI+G +R   +D A  L + ME  G+VP   TY +
Sbjct: 385 IDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYIL 444

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +  + + GR   +     +M  +G+ P+       +        L+EA    + +   G
Sbjct: 445 FIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNG 504

Query: 481 FVPD 484
             PD
Sbjct: 505 LAPD 508


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 215/379 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N +C+  +   A  FL +M + G  PD VT+ +L++ +C    +E+A  L + + G G
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +LI+ LCK    + A E+ ++M   G+ P+  TYN+L+   C     S+A 
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +RG+ P++++F+ LI  F + G++  A   ++ M    + PD   YT +ING 
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA +M   M   G   + VTY T+++G C++K + +   +F EM ++G+  + 
Sbjct: 303 CTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI G+C  G  + A  +F+ M  +   PDI TYN L+DG C  G +EKA  ++  
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKY 422

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R++  N ++Y I+I G C +G V +AF L+  +  KG+KP +++  T+I G+CR G 
Sbjct: 423 MRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGF 482

Query: 361 ASKADEFLSKMVSEGVDPD 379
             +AD    KM  +G  P+
Sbjct: 483 IHEADALFKKMKEDGFLPN 501



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 237/441 (53%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
             EA  L   M      P +  +  L++ + K  R D    + ++M  +G+SP   T N 
Sbjct: 63  FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   CR      A     +M + G  PD+V+F++L+  F    +++ AL  F ++   G
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+ V YT +I+  C+N  +  A+++ ++M + G   +VVTYN++++GLC     ++A 
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            L  +M++RG+ P+  TFT LI    K G + +A  L+ +M Q S+ PD+ TY  LI+G 
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  G +++A +++  M S    PN ++Y  LI+G+C    V +  +++YEM  KG+    
Sbjct: 303 CTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++   +I+GYC  G    A E  ++M S    PD  +YN L++G      ++KA  +   
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKY 422

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  + +  +++TY +I+ G C+ G++ D+  +   +  KG+ P+  TYTT+I+G   +  
Sbjct: 423 MRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGF 482

Query: 466 LKEAFRFHDEMLQRGFVPDDA 486
           + EA     +M + GF+P+++
Sbjct: 483 IHEADALFKKMKEDGFLPNES 503



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 222/414 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ + K  + D       +M+  G+ P   T N ++N  CR      A   +  M   G
Sbjct: 88  LLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLG 147

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T+ SL++G C   R + A  + D+++ MG  P+  TY TL+   C+  +++ A 
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAV 207

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF +M   G+ P++V++++L+      G+   A    R+M   G+ P+ + +T +I+ +
Sbjct: 208 EIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAF 267

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G ++EA ++   M++     DV TY  ++NGLC    L EA  +F  M   G +P+ 
Sbjct: 268 VKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNE 327

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLIHG CK   +     +F  M+QK +  + +TY  LI G+C VG  + A +++  
Sbjct: 328 VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQ 387

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR+  P+  +Y +L++G C  G+V +A  ++  M  + +   +V+   II+G C+ G 
Sbjct: 388 MGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGK 447

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
              A +    + S+G+ P+ I+Y T+I+GF R   + +A AL  KM+  G +P+
Sbjct: 448 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 229/425 (53%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V +  L++   +    +    L   M   G+ P ++T N ++N +C+  +  RA   
Sbjct: 80  PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L +M+++G  PD  T+ +LL   C    + +A  +F ++   G  P++V+++TLI    +
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           N  L+ A+  F +M   G+ P+ V Y  +++G C  G   +A  +  +M+++G   +V+T
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +  +++   +   + EA +L+  M++  V+PD +T+T LI+G C  G +++A  +F +M 
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
                P+ VTY TLI GFCK   +E   K++ +M  + +  N I+Y +LI GYC +G   
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  ++ +M  +   P + + N ++ G C +G   KA      M    +D + ++Y  +I
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIII 439

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  +   ++ AF L   + ++G+ P+VITY  +++GFCR+G +H+++ +  +M E G  
Sbjct: 440 QGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFL 499

Query: 448 PDRST 452
           P+ S 
Sbjct: 500 PNESV 504



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 202/381 (53%), Gaps = 4/381 (1%)

Query: 101 ATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE 160
           + Y  +L         +EA ++F  M      P IV F+ L+ + ++  + D  +  F +
Sbjct: 48  SNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQ 107

Query: 161 MKSAGLVPDNVLYT--IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
           M+  G+ P  VLYT  I++N  CR+     A     +M++ G   D+VT+ ++L+G C  
Sbjct: 108 MQILGISP--VLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHW 165

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
             + +A  LF++++  G  P+  T+TTLIH  CK+ ++N A+ +F+ M    I+P++VTY
Sbjct: 166 NRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTY 225

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
           N+L+ G C++G    A  L  DM+ R I PN I++  LI+ +  +G + EA  L+  M+ 
Sbjct: 226 NSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQ 285

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
             + P + +   +I G C  G   +A +    M S G  P+ ++Y TLI+GF + + ++ 
Sbjct: 286 MSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVED 345

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
              +  +M  +GLV + ITY V++ G+C  GR   ++ +  +M  +   PD  TY  L++
Sbjct: 346 GTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLD 405

Query: 459 GHVSQNNLKEAFRFHDEMLQR 479
           G      +++A      M +R
Sbjct: 406 GLCYNGYVEKALMIFKYMRKR 426



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 138/279 (49%)

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y  IL          EA DLF  M+     P    FT L+    K    +  ++LF+ M 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
              I P + T N +++  C+  +  +A+     M+     P+ +++  L++G+C    + 
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L+ ++VG G +P +V+  T+I   C++   + A E  ++M   G+ P+ ++YN+L+
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G         A  L+  M  +G+ P+VIT+  ++  F + G++ +++ +   MI+  + 
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           PD  TYT LING  +   L EA +    M   G+ P++ 
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEV 328



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 118/245 (48%)

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
           F  +  ++     +   N+AL+LF  M      P IV +  L+    K+   +    L+ 
Sbjct: 47  FSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFE 106

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M    ISP   +  I++N  C       A     +M+  G +P LV+  +++ G+C   
Sbjct: 107 QMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWN 166

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A     ++V  G  P+ ++Y TLI+   +  +++ A  + ++M + G+ P+V+TYN
Sbjct: 167 RIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYN 226

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +++G C  GR  D+  +L  M+++G+ P+  T+T LI+  V    + EA   +  M+Q 
Sbjct: 227 SLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQM 286

Query: 480 GFVPD 484
              PD
Sbjct: 287 SVYPD 291


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/463 (33%), Positives = 244/463 (52%), Gaps = 16/463 (3%)

Query: 34  NTLINAYCREGFLEEAFQLMNS---MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           +T + AY        AFQL  +            V+TYN+L+ GLC +G+ D A  V DE
Sbjct: 103 DTSLAAYVHANQPHLAFQLFQNELIXXXXXXSIDVWTYNTLVKGLCDEGKIDEAIRVRDE 162

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVSFSTLIGIFSRNG 149
           M  + L PD  TYNTL+    +    +E   +  EM SR GV P+ V+ + ++  F + G
Sbjct: 163 MESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEG 222

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
           +++ A     +M  +G+ PD   Y  +ING+C+ G + EA +M DEM  KG   D+ T N
Sbjct: 223 KINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLN 282

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           T+L+ LC  K   EA +L  +  +RG   D  T+ TLI G+ K    +KAL L++ M ++
Sbjct: 283 TMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKR 342

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            I P +V+YN LI G C  G+ ++A     +++ + + P+ +S  I+I+GYC  G V +A
Sbjct: 343 GIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKA 402

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
           F+   +MVG   KP + + N +++G CR     KA +  +  +S+    D ++YNT+I+ 
Sbjct: 403 FQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISY 462

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG---- 445
             +E  +D+AF L++ ME +   PD  TYN I+      GR  ++E  + ++ E G    
Sbjct: 463 LCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVK 522

Query: 446 -----LNPDRST---YTTLINGHVSQNNLKEAFRFHDEMLQRG 480
                   D S+   Y+  I+   +Q   KEA +   E  Q+G
Sbjct: 523 THDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKG 565



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 239/443 (53%), Gaps = 13/443 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           +V  LC + KID A     EME   + PD VTYNTLI+   +     E F+L+  M  + 
Sbjct: 143 LVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRG 202

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G++P   T+N ++    K+G+ + A + + +M++ G+SPD  TYNT++   C+   + EA
Sbjct: 203 GVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEA 262

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM+R+G+ PDI + +T++       + + A     + +  G + D V Y  +I G
Sbjct: 263 FRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMG 322

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           Y +     +ALK+ +EM ++G V  VV+YN ++ GLC +    +A D  NE+LE+G+ PD
Sbjct: 323 YFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPD 382

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             +   +IHG+C +G ++KA    + M   S KPDI T N L+ G C+V  +EKA KL+ 
Sbjct: 383 EVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFN 442

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
             IS++ S + ++Y  +I+  C  G + EAF L  +M  K  +P   + N I++    +G
Sbjct: 443 SWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAG 502

Query: 360 DASKADEFLSKM-----------VSEGVDPDS-ISYNTLINGFVREENMDKAFALVSKME 407
              +A++F+SK+            S+ +D  S I Y+  I+    +    +A  L  + E
Sbjct: 503 RTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESE 562

Query: 408 NQGLVPDVITYNVILTGFCRQGR 430
            +G+  +  TY  ++ GF ++ +
Sbjct: 563 QKGVSLNKYTYIKLMDGFLKRRK 585



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 192/352 (54%), Gaps = 1/352 (0%)

Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
           D+ +++TL+      G++D A+    EM+S  L+PD V Y  +I+G  +     E  ++ 
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 194 DEMLEKGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
           +EM  +G V  + VT+N ++    +   + EA D   +M+E GV PD +T+ T+I+G CK
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            G + +A  + D M +K +KPDI T NT++   C   + E+A +L      R    + ++
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           YG LI GY       +A +LW EM  +GI P++VS N +I+G C SG   +A + L++++
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            +G+ PD +S N +I+G+  E  +DKAF   +KM      PD+ T N++L G CR   + 
Sbjct: 376 EKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLE 435

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  +    I K  + D  TY T+I+    +  L EAF    +M  + F PD
Sbjct: 436 KAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPD 487



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 202/379 (53%), Gaps = 13/379 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV    K+ KI+ A   + +M + GV PD  TYNT+IN +C+ G L EAF++M+ M+ KG
Sbjct: 214 MVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKG 273

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP + T N++++ LC + + + A E+  +  + G   D  TY TL++   + +   +A 
Sbjct: 274 LKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKAL 333

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM +RG+ P +VS++ LI     +G+ D+A+    E+   GLVPD V   III+GY
Sbjct: 334 KLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGY 393

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A +  ++M+      D+ T N +L GLCR  ML +A  LFN  + +    D 
Sbjct: 394 CWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDV 453

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I   CK+G +++A +L   M  K  +PD  TYN ++      G  E+A K  + 
Sbjct: 454 VTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSK 513

Query: 301 M-----------ISRKI-SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           +            S+++ + + I Y   I+  C+ G   EA +L+ E   KG+     + 
Sbjct: 514 LSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTY 573

Query: 349 NTIIKGYC-RSGDASKADE 366
             ++ G+  R    SK D 
Sbjct: 574 IKLMDGFLKRRKSISKVDH 592



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 157/283 (55%), Gaps = 1/283 (0%)

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           +DV TYNT++ GLC    + EA  + +EM    + PD  T+ TLI G  K     +   L
Sbjct: 135 IDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRL 194

Query: 263 FDIMTQK-SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
            + M  +  ++P+ VT+N ++  F K G++ +A+     M+   +SP+  +Y  +ING+C
Sbjct: 195 LEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFC 254

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G + EAFR+  EM  KG+KP + + NT++   C      +A E   K    G   D +
Sbjct: 255 KAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEV 314

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y TLI G+ + +  DKA  L  +M+ +G+VP V++YN ++ G C  G+   +   L  +
Sbjct: 315 TYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNEL 374

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +EKGL PD  +   +I+G+  +  + +AF+FH++M+   F PD
Sbjct: 375 LEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPD 417



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%)

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           DV TYN ++ G C +G++ ++  +   M    L PD  TY TLI+G        E FR  
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 474 DEMLQRGFVPDDA 486
           +EM  RG V  +A
Sbjct: 196 EEMKSRGGVEPNA 208


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 253/472 (53%), Gaps = 7/472 (1%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K+ +A   L  M++ G+ PD    NT I+       L++A + +  M    ++P V TYN
Sbjct: 184 KLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYN 243

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR- 128
            LI G C   R + A E++ EM   G SPD  +Y T++   C+++ + E   +  +M + 
Sbjct: 244 CLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKD 303

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
             + PD V+++T + + S++G  D AL + RE +      D V Y+ I++ +CR G + +
Sbjct: 304 SNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDK 363

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A ++ +EM  KGC+ DVVTY +++NGLC+ + + +A  +  +M + G  P+  ++T L++
Sbjct: 364 AKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLN 423

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G CK+GN  +A  + ++  +    P+ +TY+ L+ GF + G+  +A  L  +MI +   P
Sbjct: 424 GLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFP 483

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
             +   +LI   C    V EA R   + +  G    +V+  T+I G+C+  D   A   L
Sbjct: 484 TPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLL 543

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             M      PD ++Y T+I+   ++  +++A  L  KM   GL+P  +TY  ++  +CR 
Sbjct: 544 DDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRM 603

Query: 429 GRMHDSELILWRMIEKGLNPD--RSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           GR+ D    L +++EK L+    R+ Y  +I    S  NL++A++   ++L+
Sbjct: 604 GRVED----LLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLR 651



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 250/480 (52%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L K      AK  L  M ++ +      +  ++ +Y R G L  A +++  M   G
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAG 199

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +   N+ I+ L    R D+A   L+ M  + + P+  TYN L+   C    + +A 
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAM 259

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
           E+  EM  +G +PD +S+ T++G   +  ++    +   +M K + L+PD V Y   ++ 
Sbjct: 260 ELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHM 319

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++G   EAL+   E  E+   +D V Y+ I++  CR   + +A ++ NEM  +G  PD
Sbjct: 320 LSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPD 379

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T++I+G C++  +++A  +   M +   KP+ V+Y  L++G CK G   +A ++  
Sbjct: 380 VVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMN 439

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                   PN I+Y +L++G+   G  +EA  L  EM+ KG  PT V  N +I+  C+  
Sbjct: 440 MSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE 499

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A  F+ + ++ G   + +++ T+I+GF ++++++ A +L+  M      PDV+TY 
Sbjct: 500 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            I+    ++GR+ ++  +  +M+  GL P   TY T+I+ +     +++  +  ++ML R
Sbjct: 560 TIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 239/481 (49%), Gaps = 38/481 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++   C  H+++ A   + EM  KG  PD ++Y T++   C+E  ++E   LM  M    
Sbjct: 245 LIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDS 304

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            L P   TYN+ ++ L K G  D A E L E  +     D   Y+ ++   CR+  M +A
Sbjct: 305 NLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKA 364

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +EI  EM  +G  PD+V+++++I    +  ++D+A    R+M   G  P+ V YT ++NG
Sbjct: 365 KEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNG 424

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP- 238
            C+NG  LEA +M +   E   + + +TY+ +++G  R    +EA DL  EM+++G FP 
Sbjct: 425 LCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPT 484

Query: 239 ----------------------------------DFYTFTTLIHGHCKDGNMNKALNLFD 264
                                             +   FTT+IHG C+  ++  AL+L D
Sbjct: 485 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 544

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M   +  PD+VTY T+ID   K G +E+A KL   M+   + P  ++Y  +I+ YC MG
Sbjct: 545 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMG 604

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +  +L  +M+ +  +    + N +I+  C  G+  +A + L K++      D+ + +
Sbjct: 605 RVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH 662

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI  ++ +     ++ +  +M N+ L+PD+     +      +G+  +++ ++ R +E+
Sbjct: 663 MLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVER 722

Query: 445 G 445
           G
Sbjct: 723 G 723



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 215/420 (51%), Gaps = 1/420 (0%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
             Y +++  L K   C  AK VL  M +  +      +  ++V   R   +  A  +   
Sbjct: 135 IVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTM 194

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M + G+ PD+   +T I +     +LD+A+ +   M+   + P+ + Y  +I GYC    
Sbjct: 195 MQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHR 254

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-ERGVFPDFYTFT 244
           + +A+++  EM  KGC  D ++Y T++  LC+ K + E   L  +ML +  + PD  T+ 
Sbjct: 255 LEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYN 314

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           T +H   K G+ ++AL       ++  + D V Y+ ++  FC+ G M+KA ++  +M S+
Sbjct: 315 TFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK 374

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y  +ING C    V +A ++  +M   G KP  VS   ++ G C++G++ +A
Sbjct: 375 GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEA 434

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E ++    +   P++I+Y+ L++GF RE    +A  LV +M  +G  P  +  N+++  
Sbjct: 435 REMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQS 494

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C++ ++ +++  + + +  G   +   +TT+I+G   +++L+ A    D+M      PD
Sbjct: 495 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 554



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 1/218 (0%)

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q   + D + Y  +++   K    + A ++   M  R+I     ++G ++  Y   G + 
Sbjct: 127 QWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLR 186

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A R+   M   GI+P L  CNT I          KA  FL +M    ++P+ I+YN LI
Sbjct: 187 NAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLI 246

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI-EKGL 446
            G+     ++ A  L+++M  +G  PD I+Y  ++   C++ R+ +  L++ +M+ +  L
Sbjct: 247 KGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNL 306

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            PD+ TY T ++      +  EA  F  E  +R F  D
Sbjct: 307 LPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVD 344


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/427 (32%), Positives = 235/427 (55%), Gaps = 21/427 (4%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   G+ PD  T N L N  C    + E    M  +  +G  P + TYN+LI GLC+  R
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A  ++ + L                  C+  +  EA+EIF EM  +G+ P+++S+S+
Sbjct: 61  ISVATCIIIDGL------------------CKVGHEDEAKEIFEEMKAQGMIPNVISYSS 102

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  F   G+L+ +   F EM   G+ P+ V + ++I+  C+ G V+EA K+ +  +++G
Sbjct: 103 LVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRG 162

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            ++D+VTYN++++G C+   L+ A  LF  M  +G   +  ++T LI+G+CK   + +A+
Sbjct: 163 IILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAM 222

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           NL++ M Q   +P++ TY+TL+ G  + G++  ANKL+  M +  IS +   Y I ++G 
Sbjct: 223 NLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGL 282

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + EA  L+ E+     K    S + +I G C++G    A EF  ++  EG+ P+ 
Sbjct: 283 CKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNV 342

Query: 381 ISYNTLINGFVREENMDKA---FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           ++ N +I+GF R E +DKA   F  + KME  G  PD+ITYN +L GFC   ++ +   +
Sbjct: 343 VTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNL 402

Query: 438 LWRMIEK 444
           L +M ++
Sbjct: 403 LHKMFKR 409



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 214/409 (52%), Gaps = 21/409 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + N LC  +++      +  + ++G  PD VTYNTLI   CR   +  A  +        
Sbjct: 16  LANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCI-------- 67

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                     +I+GLCK G  D AKE+ +EM   G+ P+  +Y++L+   C    + E++
Sbjct: 68  ----------IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESK 117

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +GV P++V F+ LI I  + G++  A          G++ D V Y  +I+G+
Sbjct: 118 RLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGF 177

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A K+   M  KGC  + ++Y  ++NG C+   + EA +L+NEM + G  P+ 
Sbjct: 178 CKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNV 237

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TL+ G  + G +  A  LF +M    I  D   Y   +DG CK G + +A +L+ +
Sbjct: 238 KTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNE 297

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S     ++ SY  LI+G C  G V  A+  + ++  +G++P +V+CN +I G+CR   
Sbjct: 298 LKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQ 357

Query: 361 ASKAD---EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
             KA+   E + KM   G  PD I+YNTL+ GF     +++   L+ KM
Sbjct: 358 VDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 215/423 (50%), Gaps = 56/423 (13%)

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           GLSPD  T N L    C    +SE       + RRG  PDIV+++TLI    R  ++   
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRI--- 61

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
                          +V   III+G C+ G   EA ++ +EM  +G + +V++Y+++++G
Sbjct: 62  ---------------SVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
            C A  L E+  LFNEM+++GV P+   F  LI   CK+G + +A  L ++  Q+ I  D
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILD 166

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
           +VTYN+LIDGFCK+G++  A KL+  M S+    N ISY ILINGYC +  V EA  L+ 
Sbjct: 167 LVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYN 226

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI------------- 381
           EM   G +P + + +T++ G  ++G    A++    M + G+  DS              
Sbjct: 227 EMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNG 286

Query: 382 ----------------------SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
                                 SY+ LI+G  +   ++ A+    ++  +GL P+V+T N
Sbjct: 287 VLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCN 346

Query: 420 VILTGFCRQGRMHDSELI---LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +++ GFCR  ++  + ++   + +M E G  PD  TY TL+ G    N L+E      +M
Sbjct: 347 IMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406

Query: 477 LQR 479
            +R
Sbjct: 407 FKR 409



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEA---FQLMNSMS 57
           +++ LCK  K++ A  F  ++ Q+G+ P+ VT N +I+ +CR   +++A   F+ M  M 
Sbjct: 313 LIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKME 372

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
             G  P + TYN+L+ G C+  + +    +L +M +
Sbjct: 373 ENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFK 408


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 247/452 (54%), Gaps = 9/452 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK++K+D AK  L EM  KG  P+ V+Y T+I++ C  G ++E  QL      + 
Sbjct: 186 LLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL-----AER 240

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN+LINGLCK+       E++ EM++ G+SP+  +Y+TL+ E      +  A 
Sbjct: 241 FEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAF 300

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +  +M +RG  P+I + S+L+ G F R    D   M+ + ++  GL P+ V Y  ++ G
Sbjct: 301 SLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQG 360

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C +G + +A+ +   M E GC  ++ TY +++NG  +   L  A  ++N+ML  G  P+
Sbjct: 361 FCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPN 420

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +T+++   C+     +A +L +IM++++  P + T+N  I G C  G ++ A K++ 
Sbjct: 421 VVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 480

Query: 300 DMISR-KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            M  + +  PN ++Y  L++G      + EA+ L  E+  +G++ +  + NT++ G C +
Sbjct: 481 QMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNA 540

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME--NQGLVPDVI 416
           G    A + + KM+  G  PD I+ N +I  + ++   ++A  ++  +    +   PDVI
Sbjct: 541 GLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVI 600

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           +Y  ++ G CR     D  ++  RMI + + P
Sbjct: 601 SYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 245/487 (50%), Gaps = 7/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L  D ++DS +  L +M+ +G +     + ++I+ Y + G  E A ++   +   G
Sbjct: 81  MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 140

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  YN +++ L  + R      V  +M + G  P+  TYN LL   C+   +  A+
Sbjct: 141 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 200

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EMS +G  P+ VS++T+I      G +       R++ +    P   +Y  +ING 
Sbjct: 201 KLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEG----RQL-AERFEPVVSVYNALINGL 255

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+       +++  EM+EKG   +V++Y+T++N L  +  +  A  L  +ML+RG  P+ 
Sbjct: 256 CKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNI 315

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQK-SIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
           +T ++L+ G    G    AL++++ M +   ++P++V YNTL+ GFC  G ++KA  ++ 
Sbjct: 316 HTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFL 375

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M     SPN  +YG LING+   G +  A  +W +M+  G  P +V   ++++  CR  
Sbjct: 376 HMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHS 435

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ-GLVPDVITY 418
              +A+  +  M  E   P   ++N  I G      +D A  +  +ME Q    P+++TY
Sbjct: 436 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTY 495

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           N +L G  +  R+ ++  +   +  +G+    STY TL++G  +      A +   +M+ 
Sbjct: 496 NELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMV 555

Query: 479 RGFVPDD 485
            G  PD+
Sbjct: 556 NGKSPDE 562



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 212/447 (47%), Gaps = 9/447 (2%)

Query: 42  REGFLEEAFQLMNSMSGKGL-KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDT 100
           +E  +  A     S++   L K    T+  +I  L   G+ D  + +L +M   G     
Sbjct: 51  QESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSE 110

Query: 101 ATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
             + ++ +   R+  ++E A E+F  +   G  P +  ++ ++       ++    M +R
Sbjct: 111 DLFISV-ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 169

Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
           +MK  G  P+   Y +++   C+N  V  A K+  EM  KGC  + V+Y T+++ +C   
Sbjct: 170 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVG 229

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
           M+ E   L  E  E    P    +  LI+G CK+ +    + L   M +K I P++++Y+
Sbjct: 230 MVKEGRQL-AERFE----PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYS 284

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV-G 338
           TLI+     G++E A  L A M+ R   PN  +   L+ G    G   +A  +W +M+ G
Sbjct: 285 TLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRG 344

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G++P +V+ NT+++G+C  G+  KA      M   G  P+  +Y +LINGF +  +++ 
Sbjct: 345 FGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEG 404

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  + +KM   G  P+V+ Y  ++   CR  +  ++E ++  M ++   P   T+   I 
Sbjct: 405 AVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 464

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G      L  A +   +M Q+   P +
Sbjct: 465 GLCDAGRLDWAEKVFRQMEQQYRCPPN 491



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 188/387 (48%), Gaps = 41/387 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+         + EM +KG+ P+ ++Y+TLIN     G +E AF L+  M  +G
Sbjct: 251 LINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRG 310

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
             P + T +SL+ G   +G    A ++ ++M++  GL P+   YNTL+   C   N+ +A
Sbjct: 311 CHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKA 370

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F  M   G +P+I ++ +LI  F++ G L+ A+  + +M ++G  P+ V+YT ++  
Sbjct: 371 VSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEA 430

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDV---------------------------------- 205
            CR+    EA  + + M ++ C   V                                  
Sbjct: 431 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPP 490

Query: 206 --VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
             VTYN +L+GL +A  + EA  L  E+  RGV     T+ TL+HG C  G    AL L 
Sbjct: 491 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLV 550

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS---RKISPNYISYGILINGY 320
             M      PD +T N +I  +CK G+ E+A ++  D++S   RK  P+ ISY  +I G 
Sbjct: 551 GKMMVNGKSPDEITMNMIILAYCKQGKAERAVQM-LDLVSCGRRKWRPDVISYTNVIWGL 609

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVS 347
           C      +   L+  M+ + I P L S
Sbjct: 610 CRSNCREDGVILFERMISERIIPILRS 636


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 236/426 (55%), Gaps = 19/426 (4%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P   + N+L+ GL    R D A++     L+  +SPD  T+NT++   CR   + +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNG---QLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           +  ++   G+AP + ++++LI  + + G    +    M  +EM  AG+ P  V + ++IN
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYC+N     A+++ +EM ++G    VVTYN++++GLC    + E   L  EM + G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF  ++ G CK G M  A +  D MT+++++PD+V YN LID + ++G+ME A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M  + ISPN  +Y  LI G+   G    A  L  EM  KGI+  +V+ N +I   C  
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  KA + L +M   G++P+ ++YNT+I GF  + N+  A+ + ++ME      +V+TY
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           NV +  FC+ G+M ++  +L  M++K L P+  TY T+  G                M++
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------MME 556

Query: 479 RGFVPD 484
           +G+ PD
Sbjct: 557 KGYTPD 562



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/425 (31%), Positives = 222/425 (52%), Gaps = 19/425 (4%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P T + N L+        ++ A +   S   + + P ++T+N++I+GLC+ G+  +A +V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRK---ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             ++   GL+P  ATYN+L+   C+K    NM   + +  EM   G++P  V+F  LI  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + +N     A+  F EMK  G+    V Y  +I+G C  G V E +K+ +EM + G   +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            +T+  +L G C+  M+ +A+D  + M ER V PD   +  LI  + + G M  A+ + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +K I P++ TYN LI GF + G+   A+ L  +M  + I  + ++Y +LI   C  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A +L  EM   G++P  ++ NTII+G+C  G+   A E  ++M       + ++YN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             I  F +   MD+A  L+++M ++ LVP+ ITY  I  G                M+EK
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------MMEK 557

Query: 445 GLNPD 449
           G  PD
Sbjct: 558 GYTPD 562



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 213/396 (53%), Gaps = 3/396 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    ++D A+       ++ V PD  T+NT+I+  CR G L +A  +   +   G
Sbjct: 162 LLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWG 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEV---LDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           L P V TYNSLI+G CKKG       V   L EM++ G+SP   T+  L+   C+  N +
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A  +F EM ++G+A  +V++++LI      G+++  +    EM+  GL P+ + +  ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G+C+ G + +A    D M E+    DVV YN +++   R   + +A  +   M ++G+ 
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  LI G  + G+   A  L D M +K I+ D+VTYN LI   C  GE+ KA KL
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M    + PN+++Y  +I G+C  G++  A+ +   M     +  +V+ N  IK +C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            G   +A++ L++M+ + + P+ I+Y T+  G + +
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEK 557



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 108/313 (34%), Positives = 176/313 (56%)

Query: 16  MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL 75
           M L EM + G+ P  VT+  LIN YC+      A ++   M  +G+   V TYNSLI+GL
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309

Query: 76  CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           C +G+ +   ++++EM  +GLSP+  T+  +L   C+K  M++A +    M+ R V PD+
Sbjct: 310 CSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           V ++ LI ++ R G+++ A+     M   G+ P+   Y  +I G+ R+G    A  + DE
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M EKG   DVVTYN ++  LC    + +A  L +EM E G+ P+  T+ T+I G C  GN
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +  A  +   M +   + ++VTYN  I  FC++G+M++AN L  +M+ + + PN I+Y  
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET 549

Query: 316 LINGYCSMGHVTE 328
           +  G    G+  +
Sbjct: 550 IKEGMMEKGYTPD 562



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K++ A      M +KG+ P+  TYN LI  + R G    A  L++ M  KG++  V TYN
Sbjct: 384 KMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI  LC KG   +A ++LDEM ++GL P+  TYNT++   C K N+  A EI   M + 
Sbjct: 444 VLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKC 503

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
               ++V+++  I  F + G++D A     EM    LVP+ + Y  I  G    G+
Sbjct: 504 RKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 3/181 (1%)

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+  S   L+ G      V  A + +   + + + P + + NT+I G CR G   KA + 
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREE---NMDKAFALVSKMENQGLVPDVITYNVILTG 424
              + + G+ P   +YN+LI+G+ ++    NM     L+ +M   G+ P  +T+ V++ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +C+      +  +   M ++G+     TY +LI+G  S+  ++E  +  +EM   G  P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 485 D 485
           +
Sbjct: 334 E 334


>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
          Length = 595

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 250/505 (49%), Gaps = 51/505 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ ++D A+  L    ++G  PD   Y+ LI +YC+ G L +A     +M   G
Sbjct: 6   VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHG 65

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++      + L+    K G          +    GL  D   YN  +   C+  NM+EA 
Sbjct: 66  IETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 125

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G+ PD + ++ LI  +   G++  A   F EM  A + PD V Y I+ +G+
Sbjct: 126 KLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGF 185

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV---- 236
           C++G V+E   + D M ++G   + +TY   + G CR   L+EA+ LFN + E+G+    
Sbjct: 186 CKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIE 245

Query: 237 -------------------------------FPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                            D ++ + LI+  C+ GN+  A N+  I
Sbjct: 246 VMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKI 305

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M + ++ PD+++Y+ LI  +C+ G+M+KA+  + DM+ R +S + I Y IL+NGYC  G 
Sbjct: 306 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGR 365

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR-------SGDASKADEF---------LS 369
           + EA +L+ +M   GIKP +++   ++ G+ +        G A +   F         LS
Sbjct: 366 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 425

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M    ++PD   Y  LI+G  + E + +A  L  +M  +GL PD   Y  ++ G+C QG
Sbjct: 426 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 485

Query: 430 RMHDSELILWRMIEKGLNPDRSTYT 454
            +  +E +L  MI+KG+ PD  T++
Sbjct: 486 EISKAEDLLQEMIDKGIEPDELTFS 510



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 262/507 (51%), Gaps = 53/507 (10%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           + YN +++  C+E  L+EA +L+ + + +G  P V+ Y+ LI   CK G   +A +  + 
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 91  MLQMGLSPDTATYNTLLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           M+  G+  +    + LL +  RK  M SE    F +    G+  D V ++  +  + +NG
Sbjct: 61  MVSHGIETNCHIVSYLL-QCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 119

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
            ++ A+    EMK  GL PD + YT +INGYC  G +  A ++ +EML+     D+VTYN
Sbjct: 120 NMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYN 179

Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
            + +G C++ ++ E  DL + M ++G+ P+  T+   I G C+ GN+++A  LF+++ +K
Sbjct: 180 ILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEK 239

Query: 270 SIKPDIVTYNTLIDGF-----------------------------------CKVGEMEKA 294
            I    V Y++++ G+                                   C+VG ++ A
Sbjct: 240 GIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGA 299

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
           + +   M+   + P+ ISY  LI+ YC  G + +A   +++MV +G+   ++    ++ G
Sbjct: 300 SNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNG 359

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE------ENMDK---AF----- 400
           YC++G   +A +   +M + G+ PD I+Y  L++G ++E      E + K   +F     
Sbjct: 360 YCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRAN 419

Query: 401 --ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
              L+S M++  + PDV  Y V++ G C+   + ++  +   M++KGL PD   YT LIN
Sbjct: 420 HNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALIN 479

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           G+ SQ  + +A     EM+ +G  PD+
Sbjct: 480 GYCSQGEISKAEDLLQEMIDKGIEPDE 506



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 243/464 (52%), Gaps = 25/464 (5%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++  CK+  ++ A   L EM+  G+ PD + Y  LIN YC +G ++ A Q+   M    +
Sbjct: 112 MDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANI 171

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P + TYN L +G CK G      ++LD M   GL P++ TY   +V  CR  N+SEAE 
Sbjct: 172 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEV 231

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F  +  +G+    V +S+++  +  +G  D A M F  +   G + D+   + +IN  C
Sbjct: 232 LFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLC 291

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R G V  A  +   MLE   V DV++Y+ +++  C+   + +A   F++M++RG+  D  
Sbjct: 292 RVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVI 351

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK---------VGEME 292
            +T L++G+CK G + +A  LF  MT   IKPD++ Y  L+DG  K         + +  
Sbjct: 352 VYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKER 411

Query: 293 KA-------NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           ++       NKL + M   +I P+   Y +LI+G C   ++ EA  L+ EM+ KG+ P  
Sbjct: 412 RSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDA 471

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM-DKAFALVS 404
            +   +I GYC  G+ SKA++ L +M+ +G++PD ++++        E N+ D+  ++  
Sbjct: 472 YAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFS--------EVNIADEELSVKI 523

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           + EN+  V +    N+  T   R   ++ S L     ++  L+P
Sbjct: 524 RKENEAPVVERKVKNISDTNIKRLCILYLSLLFKQTSLQISLSP 567



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +  A+    EM QKG+ PD   Y  LIN YC +G + +A  L+  M  KG
Sbjct: 442 LIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKG 501

Query: 61  LKPGVFTYNSL 71
           ++P   T++ +
Sbjct: 502 IEPDELTFSEV 512


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 236/426 (55%), Gaps = 19/426 (4%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P   + N+L+ GL    R D A++     L+  +SPD  T+NT++   CR   + +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNG---QLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           +  ++   G+AP + ++++LI  + + G    +    M  +EM  AG+ P  V + ++IN
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYC+N     A+++ +EM ++G    VVTYN++++GLC    + E   L  EM + G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF  ++ G CK G M  A +  D MT+++++PD+V YN LID + ++G+ME A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M  + ISPN  +Y  LI G+   G    A  L  EM  KGI+  +V+ N +I   C  
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  KA + L +M   G++P+ ++YNT+I GF  + N+  A+ + ++ME      +V+TY
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           NV +  FC+ G+M ++  +L  M++K L P+  TY T+  G                M++
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------MME 556

Query: 479 RGFVPD 484
           +G+ PD
Sbjct: 557 KGYTPD 562



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/425 (31%), Positives = 222/425 (52%), Gaps = 19/425 (4%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P T + N L+        ++ A +   S   + + P ++T+N++I+GLC+ G+  +A +V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRK---ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             ++   GL+P  ATYN+L+   C+K    NM   + +  EM   G++P  V+F  LI  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + +N     A+  F EMK  G+    V Y  +I+G C  G V E +K+ +EM + G   +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            +T+  +L G C+  M+ +A+D  + M ER V PD   +  LI  + + G M  A+ + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +K I P++ TYN LI GF + G+   A+ L  +M  + I  + ++Y +LI   C  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A +L  EM   G++P  ++ NTII+G+C  G+   A E  ++M       + ++YN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             I  F +   MD+A  L+++M ++ LVP+ ITY  I  G                M+EK
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------MMEK 557

Query: 445 GLNPD 449
           G  PD
Sbjct: 558 GYTPD 562



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 213/396 (53%), Gaps = 3/396 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L    ++D A+       ++ V PD  T+NT+I+  CR G L +A  +   +   G
Sbjct: 162 LLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWG 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEV---LDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           L P V TYNSLI+G CKKG       V   L EM++ G+SP   T+  L+   C+  N +
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A  +F EM ++G+A  +V++++LI      G+++  +    EM+  GL P+ + +  ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G+C+ G + +A    D M E+    DVV YN +++   R   + +A  +   M ++G+ 
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  LI G  + G+   A  L D M +K I+ D+VTYN LI   C  GE+ KA KL
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M    + PN+++Y  +I G+C  G++  A+ +   M     +  +V+ N  IK +C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            G   +A++ L++M+ + + P+ I+Y T+  G + +
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEK 557



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/313 (34%), Positives = 176/313 (56%)

Query: 16  MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL 75
           M L EM + G+ P  VT+  LIN YC+      A ++   M  +G+   V TYNSLI+GL
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309

Query: 76  CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
           C +G+ +   ++++EM  +GLSP+  T+  +L   C+K  M++A +    M+ R V PD+
Sbjct: 310 CSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           V ++ LI ++ R G+++ A+     M   G+ P+   Y  +I G+ R+G    A  + DE
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M EKG   DVVTYN ++  LC    + +A  L +EM E G+ P+  T+ T+I G C  GN
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           +  A  +   M +   + ++VTYN  I  FC++G+M++AN L  +M+ + + PN I+Y  
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET 549

Query: 316 LINGYCSMGHVTE 328
           +  G    G+  +
Sbjct: 550 IKEGMMEKGYTPD 562



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K++ A      M +KG+ P+  TYN LI  + R G    A  L++ M  KG++  V TYN
Sbjct: 384 KMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI  LC KG   +A ++LDEM ++GL P+  TYNT++   C K N+  A EI   M + 
Sbjct: 444 VLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKC 503

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
               ++V+++  I  F + G++D A     EM    LVP+ + Y  I  G    G+
Sbjct: 504 RKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 3/181 (1%)

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+  S   L+ G      V  A + +   + + + P + + NT+I G CR G   KA + 
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREE---NMDKAFALVSKMENQGLVPDVITYNVILTG 424
              + + G+ P   +YN+LI+G+ ++    NM     L+ +M   G+ P  +T+ V++ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +C+      +  +   M ++G+     TY +LI+G  S+  ++E  +  +EM   G  P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 485 D 485
           +
Sbjct: 334 E 334


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 253/472 (53%), Gaps = 7/472 (1%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K+ +A   L  M++ G+ PD    NT I+       L++A + +  M    ++P V TYN
Sbjct: 247 KLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYN 306

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR- 128
            LI G C   R + A E++ EM   G SPD  +Y T++   C+++ + E   +  +M + 
Sbjct: 307 CLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKD 366

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
             + PD V+++T + + S++G  D AL + RE +      D V Y+ I++ +CR G + +
Sbjct: 367 SNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDK 426

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A ++ +EM  KGC+ DVVTY +++NGLC+ + + +A  +  +M + G  P+  ++T L++
Sbjct: 427 AKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLN 486

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G CK+GN  +A  + ++  +    P+ +TY+ L+ GF + G+  +A  L  +MI +   P
Sbjct: 487 GLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFP 546

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
             +   +LI   C    V EA R   + +  G    +V+  T+I G+C+  D   A   L
Sbjct: 547 TPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLL 606

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             M      PD ++Y T+I+   ++  +++A  L  KM   GL+P  +TY  ++  +CR 
Sbjct: 607 DDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRM 666

Query: 429 GRMHDSELILWRMIEKGLNPD--RSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           GR+ D    L +++EK L+    R+ Y  +I    S  NL++A++   ++L+
Sbjct: 667 GRVED----LLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLR 714



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 241/453 (53%), Gaps = 3/453 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+   Y  ++ +Y R G L  A +++  M   G++P +   N+ I+ L    R D+A   
Sbjct: 232 PEAFGY--VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L+ M  + + P+  TYN L+   C    + +A E+  EM  +G +PD +S+ T++G   +
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349

Query: 148 NGQLDRALMYFREM-KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
             ++    +   +M K + L+PD V Y   ++   ++G   EAL+   E  E+   +D V
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            Y+ I++  CR   + +A ++ NEM  +G  PD  T+T++I+G C++  +++A  +   M
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            +   KP+ V+Y  L++G CK G   +A ++          PN I+Y +L++G+   G  
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           +EA  L  EM+ KG  PT V  N +I+  C+     +A  F+ + ++ G   + +++ T+
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 589

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+GF ++++++ A +L+  M      PDV+TY  I+    ++GR+ ++  +  +M+  GL
Sbjct: 590 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL 649

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            P   TY T+I+ +     +++  +  ++ML R
Sbjct: 650 IPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 682



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 239/481 (49%), Gaps = 38/481 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++   C  H+++ A   + EM  KG  PD ++Y T++   C+E  ++E   LM  M    
Sbjct: 308 LIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDS 367

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            L P   TYN+ ++ L K G  D A E L E  +     D   Y+ ++   CR+  M +A
Sbjct: 368 NLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKA 427

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +EI  EM  +G  PD+V+++++I    +  ++D+A    R+M   G  P+ V YT ++NG
Sbjct: 428 KEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNG 487

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP- 238
            C+NG  LEA +M +   E   + + +TY+ +++G  R    +EA DL  EM+++G FP 
Sbjct: 488 LCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPT 547

Query: 239 ----------------------------------DFYTFTTLIHGHCKDGNMNKALNLFD 264
                                             +   FTT+IHG C+  ++  AL+L D
Sbjct: 548 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 607

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M   +  PD+VTY T+ID   K G +E+A KL   M+   + P  ++Y  +I+ YC MG
Sbjct: 608 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMG 667

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +  +L  +M+ +  +    + N +I+  C  G+  +A + L K++      D+ + +
Sbjct: 668 RVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH 725

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI  ++ +     ++ +  +M N+ L+PD+     +      +G+  +++ ++ R +E+
Sbjct: 726 MLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVER 785

Query: 445 G 445
           G
Sbjct: 786 G 786



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 239/484 (49%), Gaps = 3/484 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ L   +++D A  FL  M+   + P+ +TYN LI  YC    LE+A +L+  M  KG 
Sbjct: 274 IHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGC 333

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEAE 120
            P   +Y +++  LCK+ R    + ++++ML+   L PD  TYNT +    +  +  EA 
Sbjct: 334 SPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEAL 393

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E   E   R    D V +S ++  F R G++D+A     EM S G +PD V YT +ING 
Sbjct: 394 EFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGL 453

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V +A KM  +M + GC  + V+Y  +LNGLC+     EA ++ N   E    P+ 
Sbjct: 454 CQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNA 513

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ L+HG  ++G  ++A +L   M +K   P  V  N LI   C+  ++++A +    
Sbjct: 514 ITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQ 573

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
            ++   + N +++  +I+G+C    +  A  L  +M      P +V+  TII    + G 
Sbjct: 574 CLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGR 633

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +   KM+  G+ P  ++Y T+I+ + R   ++    L+ KM ++        YN 
Sbjct: 634 IEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECR--TAYNQ 691

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++   C  G +  +  +L +++      D +T   LI  ++S+     ++     M  R 
Sbjct: 692 VIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRN 751

Query: 481 FVPD 484
            +PD
Sbjct: 752 LIPD 755



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 201/384 (52%), Gaps = 1/384 (0%)

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
            +  ++V   R   +  A  +   M + G+ PD+   +T I +     +LD+A+ +   M
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
           +   + P+ + Y  +I GYC    + +A+++  EM  KGC  D ++Y T++  LC+ K +
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 353

Query: 222 TEADDLFNEML-ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
            E   L  +ML +  + PD  T+ T +H   K G+ ++AL       ++  + D V Y+ 
Sbjct: 354 KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 413

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           ++  FC+ G M+KA ++  +M S+   P+ ++Y  +ING C    V +A ++  +M   G
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 473

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
            KP  VS   ++ G C++G++ +A E ++    +   P++I+Y+ L++GF RE    +A 
Sbjct: 474 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEAC 533

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            LV +M  +G  P  +  N+++   C++ ++ +++  + + +  G   +   +TT+I+G 
Sbjct: 534 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 593

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPD 484
             +++L+ A    D+M      PD
Sbjct: 594 CQKDDLEAALSLLDDMYLSNKHPD 617



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P++  Y  ++  + R   +  A  +++ M+  G+ PD+   N  +       R+  +   
Sbjct: 232 PEAFGY--VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L RM    + P+  TY  LI G+   + L++A     EM  +G  PD
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPD 336


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 241/440 (54%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           +D K+  A     EM +   +P  V +N L++A  +    +    L   M   G++  ++
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T+N +IN  C   +   A  VL +ML++G  PD  T  +L+   CR+  +S+A  +  +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G  PDIV+++ +I    +  +++ AL +F+E+   G+ P+ V YT ++NG C +G  
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A ++  +M+++    +V+TY+ +L+   +   + EA ++F EM+   + PD  T+++L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I+G C    +++A  +FD+M  K   PD+V+YNTLI+GFCK   +E   KL+  M  R +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
             N ++Y  LI G+  +G V +A   + +M   G+ P + + N ++ G C +G   KA  
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               M    +D D ++Y T+I G  +   ++ A+ L   +  +GL PD++TY  +++G C
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 427 RQGRMHDSELILWRMIEKGL 446
            +G  H+ E +  +M ++GL
Sbjct: 482 TKGLQHEVEALYTKMKQEGL 501



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 238/414 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A+ K  K D       +ME  G+  D  T+N +IN +C    +  A  ++  M   G
Sbjct: 91  LLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLG 150

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P   T  SL+NG C++ R   A  ++D+M+++G  PD   YN ++   C+   +++A 
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDAL 210

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F E+ R+G+ P++V+++ L+     +G+ + A    R+M    + P+ + Y+ +++ +
Sbjct: 211 DFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAF 270

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +NG VLEA ++ +EM+      D+VTY++++NGLC    + EA+ +F+ M+ +G FPD 
Sbjct: 271 VKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDV 330

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI+G CK   +   + LF  M+Q+ +  + VTYNTLI GF +VG+++KA + ++ 
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQ 390

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  +SP+  +Y IL+ G C  G + +A  ++ +M    +   +V+  T+I+G C++G 
Sbjct: 391 MDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGK 450

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
              A      +  +G+ PD ++Y T+++G   +    +  AL +KM+ +GL+ +
Sbjct: 451 VEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 239/445 (53%)

Query: 42  REGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTA 101
           R+  L +A  L   M      P +  +N L++ + K  + D    +  +M  +G+  D  
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           T+N ++   C    +S A  +  +M + G  PD V+  +L+  F R  ++  A+    +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
              G  PD V Y  II+  C+   V +AL    E+  KG   +VVTY  ++NGLC +   
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
            +A  L  +M++R + P+  T++ L+    K+G + +A  +F+ M + SI PDIVTY++L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           I+G C    +++AN+++  M+S+   P+ +SY  LING+C    V +  +L+ +M  +G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
               V+ NT+I+G+ + GD  KA EF S+M S GV PD  +YN L+ G      ++KA  
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +   M+   +  D++TY  ++ G C+ G++ D+  +   +  KGL PD  TYTT+++G  
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 462 SQNNLKEAFRFHDEMLQRGFVPDDA 486
           ++    E    + +M Q G + +D+
Sbjct: 482 TKGLQHEVEALYTKMKQEGLMKNDS 506



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 191/346 (55%), Gaps = 6/346 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCK  +++ A  F  E+ +KG+ P+ VTY  L+N  C  G   +A +L+  M  + 
Sbjct: 196 IIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRK 255

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY++L++   K G+   AKE+ +EM++M + PD  TY++L+   C  + + EA 
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  M  +G  PD+VS++TLI  F +  +++  +  FR+M   GLV + V Y  +I G+
Sbjct: 316 QMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGF 375

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V +A +   +M   G   D+ TYN +L GLC   +L +A  +F +M +  +  D 
Sbjct: 376 FQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDI 435

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TT+I G CK G +  A  LF  ++ K +KPDIVTY T++ G C  G   +   L+  
Sbjct: 436 VTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTK 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           M    +  N     +L  G    G +T +  L  +M+  G  P+L+
Sbjct: 496 MKQEGLMKN---DSMLCLGD---GDITISAELIKKMLSCGYAPSLL 535


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/470 (31%), Positives = 240/470 (51%), Gaps = 30/470 (6%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           + QK   P    +  ++ +  +      A  L   M  KG+   + T N LIN   + G+
Sbjct: 51  LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              +  V   +L+ G  P+  T  TL+   C K                      VS+ T
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLCLK----------------------VSYGT 148

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    + GQ   AL   R +    + P+ V+Y  II+  C+   V EA  +  EM+ +G
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              DVVTY+ +++G      L +A DLFN+M+   + PD YTF  L+ G CKDG M +  
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            +F +M ++ IKP++VTY +L+DG+C V ++ KAN ++  M    ++P+  SY I+ING+
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C +  V EA  L+ +M  K I P +V+  ++I G C+SG  S A + + +M   GV PD 
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQ--------GLVPDVITYNVILTGFCRQGRMH 432
           I+Y+++++   +   +DKA AL++K+++Q        G   DV  Y V++ GFC +G  +
Sbjct: 389 ITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFN 448

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           ++  +L +M + G  PD  TY  +I     ++    A +   EM+ RG +
Sbjct: 449 EALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 232/440 (52%), Gaps = 40/440 (9%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL-------- 71
           +ME KG+  + VT N LIN + + G    +F +  ++  KG  P V T  +L        
Sbjct: 85  QMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKV 144

Query: 72  -----INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
                INGLCK G+   A ++L  +    + P+   YNT++   C+ + ++EA +++ EM
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 204

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G++PD+V++S LI  F   G+L  A+  F +M    + PD   + I+++G+C++G +
Sbjct: 205 VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 264

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            E   +   M+++G   +VVTY ++++G C  K + +A+ +FN M + GV PD  ++  +
Sbjct: 265 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIM 324

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I+G CK   +++A+NLF  M  K+I P++VTY +LIDG CK G++  A KL  +M  R +
Sbjct: 325 INGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+ I+Y  +++  C    V +A  L  ++                            D+
Sbjct: 385 PPDIITYSSILDALCKNHQVDKAIALLTKL---------------------------KDQ 417

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
               +  +G + D  +Y  +I GF  +   ++A AL+SKME+ G +PD  TY +I+    
Sbjct: 418 VFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLF 477

Query: 427 RQGRMHDSELILWRMIEKGL 446
           ++     +E +L  MI +GL
Sbjct: 478 KKDENDMAEKLLREMIARGL 497



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 204/381 (53%), Gaps = 21/381 (5%)

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD-------------NV 171
           +M  +G+A ++V+ + LI  FS+ GQ   +   F  +   G  P+              V
Sbjct: 85  QMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKV 144

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            Y  +ING C+ G    AL++   +  K    +VV YNTI++ +C+ K++ EA DL++EM
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 204

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
           +  G+ PD  T++ LI G    G +  A++LF+ M  ++IKPD+ T+N L+DGFCK G+M
Sbjct: 205 VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 264

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           ++   ++A M+ + I PN ++Y  L++GYC +  V +A  ++  M   G+ P   S N +
Sbjct: 265 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIM 324

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I G+C+     +A     KM  + + P+ ++Y +LI+G  +   +  A  LV +M ++G+
Sbjct: 325 INGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIE--------KGLNPDRSTYTTLINGHVSQ 463
            PD+ITY+ IL   C+  ++  +  +L ++ +        KG N D   YT +I G   +
Sbjct: 385 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVK 444

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
               EA     +M   G +PD
Sbjct: 445 GLFNEALALLSKMEDNGRIPD 465



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 190/349 (54%), Gaps = 8/349 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +  +A   L  ++ K V P+ V YNT+I++ C+   + EAF L + M  +G
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY++LI+G    G+   A ++ ++M+   + PD  T+N L+   C+   M E +
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M ++G+ P++V++ +L+  +    Q+++A   F  M   G+ PD   Y I+ING+
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   V EA+ +  +M  K  + +VVTY ++++GLC++  ++ A  L +EM +RGV PD 
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388

Query: 241 YTFTTLIHGHCKDGNMNKALNL--------FDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
            T+++++   CK+  ++KA+ L        F+ +  K    D+  Y  +I GFC  G   
Sbjct: 389 ITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFN 448

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           +A  L + M      P+  +Y I+I           A +L  EM+ +G+
Sbjct: 449 EALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 190/359 (52%), Gaps = 22/359 (6%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           + ++   P I  F  ++G   +      A+   R+M+  G+  + V   I+IN + + G 
Sbjct: 51  LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
              +  +   +L+KG   +V+T  T++ GLC                         ++ T
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLCLK----------------------VSYGT 148

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI+G CK G    AL L   +  K ++P++V YNT+ID  CKV  + +A  L+++M+S  
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           ISP+ ++Y  LI+G+  +G + +A  L+ +M+ + IKP + + N ++ G+C+ G   +  
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
              + M+ +G+ P+ ++Y +L++G+   + ++KA ++ + M   G+ PD  +YN+++ GF
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+  ++ ++  +  +M  K + P+  TYT+LI+G      +  A +  DEM  RG  PD
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPD 387



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 133/271 (49%), Gaps = 15/271 (5%)

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           +FN       F   YT   +      + N+  + N   ++ QK+  P I  +  ++    
Sbjct: 14  IFNFQTLNSSFQQIYTLNYITIIKNDEHNLVSSFN--RLLHQKNPTPPIFEFGKILGSLV 71

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K+     A  L   M  + I+ N ++  ILIN +  +G    +F ++  ++ KG  P ++
Sbjct: 72  KINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVI 131

Query: 347 SCNTIIK-------------GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           +  T+IK             G C+ G A  A + L ++  + V P+ + YNT+I+   + 
Sbjct: 132 TLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV 191

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           + +++AF L S+M ++G+ PDV+TY+ +++GF   G++ D+  +  +MI + + PD  T+
Sbjct: 192 KLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTF 251

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             L++G      +KE       M+++G  P+
Sbjct: 252 NILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 282


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 246/462 (53%), Gaps = 1/462 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           GV P   TY+ L+ A+ +   +E    L+  M   G+KP V++Y   I  L +  R D A
Sbjct: 269 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEA 328

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             +L EM   G  PD  T+  L+   C    +S+A+++F +M +    PD V++ TL+  
Sbjct: 329 YRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 388

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F+ NG+    +  +  MK+ G   + V YT +I+  C+ G V EAL+M DEM +KG V +
Sbjct: 389 FADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 448

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             +YN++++G  +A    +A +LF  M   G  P+ YT    I+ + K G   KA+  ++
Sbjct: 449 QYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 508

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M  K I PD+V  N ++ G  K G +  A +++ ++ +  +SP+ I+Y ++I       
Sbjct: 509 LMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKAS 568

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
              EA +++Y+M+     P ++  N++I    ++G   +A +   ++    ++P   +YN
Sbjct: 569 KFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYN 628

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TL+ G  RE  + +   L+ +M +    P++ITYN IL   C+ G ++D+  +L+ M  K
Sbjct: 629 TLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 688

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G  PD S+Y T+I G V +    EAF    +M ++  +PD A
Sbjct: 689 GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYA 729



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 244/487 (50%), Gaps = 2/487 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  L +  + D A   L EME +G  PD +T+  LI   C  G + +A  +   M     
Sbjct: 316 IRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 375

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP   TY +L++     G      E+ + M   G + +   Y  ++   C+   + EA E
Sbjct: 376 KPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE 435

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F EM ++G+ P+  S+++LI  F +  +   AL  F+ M   G  P+   + + IN Y 
Sbjct: 436 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYG 495

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++G  ++A++  + M  KG V DVV  N +L GL ++  L  A  +F+E+   GV PD  
Sbjct: 496 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 555

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+T +I    K    ++A+ +F  M + +  PD++  N+LID   K G  ++A +++  +
Sbjct: 556 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQL 615

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
               + P   +Y  L+ G    G V E   L  EM      P L++ NTI+   C++G  
Sbjct: 616 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAV 675

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           + A + L  M ++G  PD  SYNT+I G V+EE  ++AF++  +M+ + L+PD  T   I
Sbjct: 676 NDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTI 734

Query: 422 LTGFCRQGRMHDS-ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           L  F + G M ++  +I    ++ G   DRS+  +L+ G + +   +++  F + +   G
Sbjct: 735 LPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSG 794

Query: 481 FVPDDAF 487
              DD F
Sbjct: 795 ITLDDFF 801



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 258/557 (46%), Gaps = 72/557 (12%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ L K  + D A     ++++  + P   TYNTL+    REG ++E   L+  M    
Sbjct: 595  LIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 654

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P + TYN++++ LCK G  + A ++L  M   G  PD ++YNT++    ++E  +EA 
Sbjct: 655  YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAF 714

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-------------------- 160
             IFC+M ++ + PD  +  T++  F + G +  AL   +E                    
Sbjct: 715  SIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEG 773

Query: 161  ----------------MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
                            + S+G+  D+     +I   C+    LEA ++  +    G  + 
Sbjct: 774  ILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 833

Query: 205  VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD------------------------- 239
              +YN+++ GL    ++  A+ LF EM E G  PD                         
Sbjct: 834  TGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 893

Query: 240  ----------FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                      + T+ T+I G  K   + +A++L+  +  +   P   TY  L+DG  K G
Sbjct: 894  EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 953

Query: 290  EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
             +E A  L+ +M+      N   Y IL+NG+   G+  +   L+ +MV +GI P + S  
Sbjct: 954  RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 1013

Query: 350  TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
             II   C++G  +    +  +++  G++PD I+YN LI+G  + + +++A +L ++M+ +
Sbjct: 1014 IIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 1073

Query: 410  GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            G+VP++ TYN ++    + G+  ++  +   ++ KG  P+  TY  LI G+    +   A
Sbjct: 1074 GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1133

Query: 470  FRFHDEMLQRGFVPDDA 486
            +  +  M+  G +P+ +
Sbjct: 1134 YAAYGRMIVGGCLPNSS 1150



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 232/456 (50%), Gaps = 8/456 (1%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  L K+ + + A    C+M +K + PD  T  T++ ++ + G ++EA  ++       
Sbjct: 700  VIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYF--- 755

Query: 61   LKPGVFT----YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            L+PG  T     +SL+ G+ KK   +++ E  + +   G++ D      L+   C+++  
Sbjct: 756  LQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKA 815

Query: 117  SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             EA E+  +    GV+    S+++LI        +D A   F EMK  G  PD   Y ++
Sbjct: 816  LEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLL 875

Query: 177  INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
            ++   ++  + E LK+++EM  KG     VTYNTI++GL +++ L +A DL+  ++ +G 
Sbjct: 876  LDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGF 935

Query: 237  FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
             P   T+  L+ G  K G +  A NLF+ M +   K +   YN L++G    G  EK   
Sbjct: 936  SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 995

Query: 297  LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
            L+ DM+ + I+P+  SY I+I+  C  G + +    + +++  G++P L++ N +I G  
Sbjct: 996  LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLG 1055

Query: 357  RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
            +S    +A    ++M  +G+ P+  +YN+LI    +     +A  +  ++  +G  P+V 
Sbjct: 1056 KSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVF 1115

Query: 417  TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
            TYN ++ G+   G    +     RMI  G  P+ ST
Sbjct: 1116 TYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 229/512 (44%), Gaps = 35/512 (6%)

Query: 8   DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
           D   ++ + F     +  V   T + N +++     G + +  ++ + M  + +K  V T
Sbjct: 147 DGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGT 206

Query: 68  YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
           + ++  GL  +G    A   L  M + G+  +  TYN L+    +     EA E++  M 
Sbjct: 207 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMM 266

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             GV P + ++S L+  F +   ++  L   REM++ G+ P+   YTI I    +     
Sbjct: 267 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFD 326

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL- 246
           EA ++  EM  +GC  DV+T+  ++  LC A  +++A D+F +M +    PD  T+ TL 
Sbjct: 327 EAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL 386

Query: 247 ----------------------------------IHGHCKDGNMNKALNLFDIMTQKSIK 272
                                             I   C+ G + +AL +FD M QK I 
Sbjct: 387 DKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIV 446

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+  +YN+LI GF K      A +L+  M      PN  ++ + IN Y   G   +A + 
Sbjct: 447 PEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQR 506

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           +  M  KGI P +V+ N ++ G  +SG    A     ++ + GV PD+I+Y  +I    +
Sbjct: 507 YELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSK 566

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
               D+A  +   M     VPDV+  N ++    + GR  ++  I +++ E  L P   T
Sbjct: 567 ASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGT 626

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y TL+ G   +  +KE     +EM    + P+
Sbjct: 627 YNTLLAGLGREGKVKEVMHLLEEMYHSNYPPN 658



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 202/398 (50%)

Query: 23   QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
            Q G   D  + ++L+    ++   E++ +    ++  G+    F    LI  LCK+ +  
Sbjct: 757  QPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKAL 816

Query: 83   RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
             A E++ +    G+S  T +YN+L+     +  +  AE +F EM   G  PD  +++ L+
Sbjct: 817  EAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 876

Query: 143  GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
                ++ +++  L    EM   G     V Y  II+G  ++  + +A+ +   ++ +G  
Sbjct: 877  DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 936

Query: 203  MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
                TY  +L+GL +A  + +A++LFNEMLE G   +   +  L++GH   GN  K  +L
Sbjct: 937  PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHL 996

Query: 263  FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            F  M  + I PDI +Y  +ID  CK G++      +  ++   + P+ I+Y +LI+G   
Sbjct: 997  FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 1056

Query: 323  MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
               + EA  L+ EM  KGI P L + N++I    ++G A++A +   +++++G  P+  +
Sbjct: 1057 SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1116

Query: 383  YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            YN LI G+    + D A+A   +M   G +P+  T ++
Sbjct: 1117 YNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHI 1154



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 201/397 (50%), Gaps = 5/397 (1%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  LCK  K   A   + + +  GV   T +YN+LI     E  ++ A  L   M   G
Sbjct: 805  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG 864

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P  FTYN L++ + K  R +   +V +EM + G      TYNT++    +   + +A 
Sbjct: 865  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 924

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +++  +  +G +P   ++  L+    + G+++ A   F EM   G   +  +Y I++NG+
Sbjct: 925  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 984

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
               G   +   +  +M+++G   D+ +Y  I++ LC+A  L +    F ++LE G+ PD 
Sbjct: 985  RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 1044

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T+  LI G  K   + +A++LF+ M +K I P++ TYN+LI    K G+  +A K++ +
Sbjct: 1045 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1104

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT--IIKGYCRS 358
            ++++   PN  +Y  LI GY   G    A+  +  M+  G  P   +C+   ++K + + 
Sbjct: 1105 LLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLK- 1163

Query: 359  GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
            GD+   +  ++ + +EG+   S ++   I+   RE+N
Sbjct: 1164 GDSDSYEIIVTFINAEGMLAYSRAWKFCISS--REDN 1198


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 229/455 (50%), Gaps = 33/455 (7%)

Query: 37  INAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL 96
           +N  C+ G   EA   +  M  +G KP V     LI GL    R ++A  V++ + Q G 
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG- 142

Query: 97  SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
            PD+  YN ++   CR +    A  +   M  RG +PD+V+++ LIG     G+LD AL 
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
              ++      P  + YTI+I     +G + +A+++ DEM+ +G   D+ TYN I+ G+C
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262

Query: 217 RAKMLTEA--------------------------------DDLFNEMLERGVFPDFYTFT 244
           +  ++  A                                + L ++M+ +G  P+  T++
Sbjct: 263 KRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYS 322

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
            LI   C+DG   +A+++  +M +K + PD   Y+ LI  FCK G+++ A     DMIS 
Sbjct: 323 VLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISA 382

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y  ++   C  G   EA  ++ ++   G  P   S NT+      SGD  +A
Sbjct: 383 GWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRA 442

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
              + +M+S GVDPD I+YN+LI+   R+  +D+A  L+  ME     P VI+YN++L G
Sbjct: 443 LTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLG 502

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
            C+  R+ D+  +L  M++ G  P+ +TYT L+ G
Sbjct: 503 LCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEG 537



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 193/405 (47%), Gaps = 32/405 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C+  + D+A   +  M+ +G  PD VTYN LI + C  G L+ A ++M+ +    
Sbjct: 152 VISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDN 211

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK------- 113
             P V TY  LI      G  D A  +LDEM+  GL PD  TYN ++   C++       
Sbjct: 212 CNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAF 271

Query: 114 ------------------------ENMSEA-EEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
                                   E   EA E +  +M  +G  P+IV++S LI    R+
Sbjct: 272 EFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRD 331

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+   A+   R MK  GL PD   Y  +I+ +C+ G V  A+   D+M+  G + D+V Y
Sbjct: 332 GKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNY 391

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           NTI+  LC+     EA ++F ++ E G  P+  ++ T+       G+  +AL +   M  
Sbjct: 392 NTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLS 451

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PD +TYN+LI   C+ G +++A  L  DM   +  P  ISY I++ G C    + +
Sbjct: 452 NGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVD 511

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
           A  +   MV  G +P   +   +++G   +G  S A E    +VS
Sbjct: 512 AIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVS 556



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 198/415 (47%), Gaps = 10/415 (2%)

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTL---LVESCRKENMSEAEEIFCEMSR 128
           +N LCK G+   A   L++M++ G  PD      L   L  S R E      EI  +   
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG- 142

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
               PD  +++ +I  F R+ + D A      MK  G  PD V Y I+I   C  G +  
Sbjct: 143 ---DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDL 199

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           ALK+ D++LE  C   V+TY  ++        + +A  L +EM+ RG+ PD YT+  ++ 
Sbjct: 200 ALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVR 259

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G CK G +++A   F+ ++  +  P +  YN L+ G    G  E   +L +DMI +   P
Sbjct: 260 GMCKRGLVDRA---FEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEP 316

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N ++Y +LI+  C  G   EA  +   M  KG+ P     + +I  +C+ G    A  F+
Sbjct: 317 NIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFV 376

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             M+S G  PD ++YNT++    ++   D+A  +  K+E  G  P+  +YN +       
Sbjct: 377 DDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSS 436

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G    +  ++  M+  G++PDR TY +LI+       + EA     +M +  + P
Sbjct: 437 GDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQP 491



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 145/267 (54%), Gaps = 1/267 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           + ++ +  + +M  KG  P+ VTY+ LI++ CR+G   EA  ++  M  KGL P  + Y+
Sbjct: 298 RWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYD 357

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            LI+  CK+G+ D A   +D+M+  G  PD   YNT++   C+K    EA  IF ++   
Sbjct: 358 PLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEV 417

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  P+  S++T+ G    +G   RAL    EM S G+ PD + Y  +I+  CR+G V EA
Sbjct: 418 GCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEA 477

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           + +  +M        V++YN +L GLC+A  + +A ++   M++ G  P+  T+T L+ G
Sbjct: 478 IGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEG 537

Query: 250 HCKDGNMNKALNLF-DIMTQKSIKPDI 275
               G  + A+ L   +++  +I  D+
Sbjct: 538 VGYAGWRSYAVELAKSLVSMNAISQDL 564


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 217/378 (57%), Gaps = 3/378 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+  +   A   + +M + G  PD VT ++LIN +C+   + +A  L++ M   G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN++I+G CK G  + A E+ D M + G+  D  TYN+L+   C     S+A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + P++++F+ +I +F + G+   A+  + EM    + PD   Y  +ING 
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G V EA +M D M+ KGC+ DVVTYNT++NG C++K + E   LF EM +RG+  D 
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I G+ + G  + A  +F  M     +P+I TY+ L+ G C    +EKA  L+ +
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFEN 406

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   +I  +  +Y I+I+G C +G+V +A+ L+  +  KG+KP +VS  T+I G+CR   
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466

Query: 361 ASKADEFLSKMVSEGVDP 378
             K+D    KM  +G+ P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 223/413 (53%), Gaps = 3/413 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ + K    D        ME  G+  D  +YN +IN  CR      A  ++  M   G
Sbjct: 75  VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 134

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T +SLING C+  R   A +++ +M +MG  PD   YNT++  SC+   +++A 
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M R GV  D V++++L+     +G+   A    R+M    +VP+ + +T +I+ +
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA+K+ +EM  +    DV TYN+++NGLC    + EA  + + M+ +G  PD 
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI+G CK   +++   LF  M Q+ +  D +TYNT+I G+ + G  + A ++++ 
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR   PN  +Y IL+ G C    V +A  L+  M    I+  + + N +I G C+ G+
Sbjct: 375 MDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
              A +    +  +G+ PD +SY T+I+GF R+   DK+  L  KM+  GL+P
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 234/438 (53%), Gaps = 3/438 (0%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           LEE   L   M      P +  ++ +++ + K    D    +   M   G+  D  +YN 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   CR      A  +  +M + G  PD+V+ S+LI  F +  ++  A+    +M+  G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             PD V+Y  II+G C+ G V +A+++ D M   G   D VTYN+++ GLC +   ++A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            L  +M+ R + P+  TFT +I    K+G  ++A+ L++ MT++ + PD+ TYN+LI+G 
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  G +++A ++   M+++   P+ ++Y  LING+C    V E  +L+ EM  +G+    
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++ NTII+GY ++G    A E  S+M S    P+  +Y+ L+ G      ++KA  L   
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M+   +  D+ TYN+++ G C+ G + D+  +   +  KGL PD  +YTT+I+G   +  
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466

Query: 466 LKEAFRFHDEMLQRGFVP 483
             ++   + +M + G +P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 201/362 (55%), Gaps = 3/362 (0%)

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           N+ E  ++FC+M +    P IV FS ++   +++   D  +  F  M+  G+  D   Y 
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+IN  CR    + AL +  +M++ G   DVVT ++++NG C+   + +A DL ++M E 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  PD   + T+I G CK G +N A+ LFD M +  ++ D VTYN+L+ G C  G    A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L  DM+ R I PN I++  +I+ +   G  +EA +L+ EM  + + P + + N++I G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C  G   +A + L  MV++G  PD ++YNTLINGF + + +D+   L  +M  +GLV D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            ITYN I+ G+ + GR   ++ I  RM  +   P+  TY+ L+ G      +++A    +
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFE 405

Query: 475 EM 476
            M
Sbjct: 406 NM 407



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 229/432 (53%), Gaps = 3/432 (0%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
             C+M Q    P  V ++ +++   +    +    L + M   G+   +++YN +IN LC
Sbjct: 56  LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
           +  R   A  V+ +M++ G  PD  T ++L+   C+   + +A ++  +M   G  PD+V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
            ++T+I    + G ++ A+  F  M+  G+  D V Y  ++ G C +G   +A ++  +M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           + +  V +V+T+  +++   +    +EA  L+ EM  R V PD +T+ +LI+G C  G +
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A  + D+M  K   PD+VTYNTLI+GFCK   +++  KL+ +M  R +  + I+Y  +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I GY   G    A  ++  M     +P + + + ++ G C +    KA      M    +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
           + D  +YN +I+G  +  N++ A+ L   +  +GL PDV++Y  +++GFCR+ +   S+L
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472

Query: 437 ILWRMIEKGLNP 448
           +  +M E GL P
Sbjct: 473 LYRKMQEDGLLP 484



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 156/297 (52%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           E + +  +M++   +  +V ++ +L+ + ++K       LF+ M   G+  D Y++  +I
Sbjct: 52  EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +  C+      AL++   M +   +PD+VT ++LI+GFC+   +  A  L + M      
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ + Y  +I+G C +G V +A  L+  M   G++   V+ N+++ G C SG  S A   
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           +  MV   + P+ I++  +I+ FV+E    +A  L  +M  + + PDV TYN ++ G C 
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GR+ +++ +L  M+ KG  PD  TY TLING      + E  +   EM QRG V D
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%)

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
           N+ + ++LF  M Q    P IV ++ ++    K    +    L+  M    I  +  SY 
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
           I+IN  C       A  +  +M+  G +P +V+ +++I G+C+      A + +SKM   
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G  PD + YNT+I+G  +   ++ A  L  +ME  G+  D +TYN ++ G C  GR  D+
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++  M+ + + P+  T+T +I+  V +    EA + ++EM +R   PD
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 140/481 (29%), Positives = 246/481 (51%), Gaps = 6/481 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +  A+ +L  M Q    P+ V+YN +I+ YC+   +E+A   +  M   G
Sbjct: 16  LISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKALAFLREMEELG 74

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    Y+S++   CK G   +A +V  EM   G  PD   +N LL    R   + EA 
Sbjct: 75  HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 134

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M+ RG  PD+V+++T+I    +  +LD A+     MK   + P  V YT +I+  
Sbjct: 135 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 194

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A ++ ++M E  C      Y+ + N L RA  L EA  ++++M  + V    
Sbjct: 195 CKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTD 254

Query: 241 YTFTTLIHGHCK-DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            T++ ++ G  K DG   +A  L   M  K I PD   Y+ LI+G CK     +A +++ 
Sbjct: 255 NTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQ 314

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M  R ISP  ++Y  L+ G  S   + +A  L Y M+ +G  P   S N +I+G+C +G
Sbjct: 315 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANG 374

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME----NQGLVPDV 415
           D ++A      M+ +G+  ++ +YN +I GF+++E    A+ L  +M+    ++   P++
Sbjct: 375 DTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNM 434

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            TY ++++  C+  ++ ++  +L  M +KG  P    +  L++       L +AF  + E
Sbjct: 435 FTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKE 494

Query: 476 M 476
           M
Sbjct: 495 M 495



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 146/469 (31%), Positives = 250/469 (53%), Gaps = 8/469 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G++P+ + YN LI+  C+ G L EA   +  M  +   P V +YN +I+G CK   
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARN 59

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            ++A   L EM ++G  P    Y++++   C+  N+S+A ++F EM  +G  PDIV+F+ 
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+    R  ++  A   FR M S G  PD V Y  +I G C+   + EA+ + + M ++ 
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
                VTY T+++ LC+   L +A ++F +M E         ++ L +   + G + +A 
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKV-GEMEKANKLWADMISRKISPNYISYGILING 319
            ++  M +K++     TY+ ++ G  K+ G   +A KL  +M+ +KI+P++ +Y ILING
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILING 299

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C      EA  ++ EM G+GI PT+V+ NT+++G   +     A E    M+ +G  PD
Sbjct: 300 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPD 359

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           + SYN +I GF    + ++A+ L   M   G+V +  TYN ++ GF +      S  +L+
Sbjct: 360 TCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKD-EAWSSAWMLF 418

Query: 440 RMIEKGLN-----PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           + ++ G N     P+  TY  LI+     + ++EAF+    M  +GFVP
Sbjct: 419 KRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVP 467



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/560 (28%), Positives = 243/560 (43%), Gaps = 81/560 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V + CK   +  A     EM  KG  PD V +N L++   R   + EA +L  SM+ +G
Sbjct: 85  IVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 144

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TYN++I GLCK  + D A  +L+ M Q  +SP   TY TL+   C+   + +A 
Sbjct: 145 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAY 204

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM------------------- 161
           E+F +M+    A    ++S L     R G+L  A   + +M                   
Sbjct: 205 EVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGL 264

Query: 162 --------KSAGLV---------PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
                   ++A LV         PD   Y+I+ING C+     EA +M  EM  +G    
Sbjct: 265 SKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPT 324

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           VVTYNT+L GL     L +A +L   ML++G  PD  ++  +I G C +G+ N+A  LF 
Sbjct: 325 VVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQ 384

Query: 265 IMTQKSI---------------------------------------KPDIVTYNTLIDGF 285
            M +  I                                        P++ TY  LI   
Sbjct: 385 DMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSL 444

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK  ++E+A KL + M  +   P+   + +L++     G + +AF L+ EM     +  +
Sbjct: 445 CKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLV 504

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            S N ++ G  R G   +A +FL +M   G+ PD  +Y+ L+ G   +   D+A  LV +
Sbjct: 505 GSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEE 564

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDS-ELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +   G  P+      +L   C QG    + E   W +   G+      + TL    V+  
Sbjct: 565 LVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCW-LPSVGVEVTLGMHNTL----VTSC 619

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
            L     + D + QR  VPD
Sbjct: 620 CLARKLDYLDMIEQREGVPD 639


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 251/487 (51%), Gaps = 19/487 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC + +   A   +     K G  PD  +Y  L+   C E   EEA  L++ M+  
Sbjct: 54  ILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAED 113

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V +Y ++I+G  K+    +A  +  EML  G+ PD  T N+++   C+ + M 
Sbjct: 114 GDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMD 173

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +AEE+  +M  + + PD  ++++L+  +  +GQL  A+   ++M   G  P+ V Y+++I
Sbjct: 174 KAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLI 233

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  C+ G   EA ++ + M++     +V TY  +L+G      L E ++L + M++ GV 
Sbjct: 234 DCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVR 293

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD + F   I+ + K G +++A+  F+ M Q+ + PDI++Y T+IDG CK+G ++ A   
Sbjct: 294 PDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQ 353

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  MI   +SP+ + +  LI+G+   G   +A  L+YEM+ +GI+PT+V   T+I    +
Sbjct: 354 FCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFK 413

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G  ++A      M    V P+ +SYN +I+G+     +D+   L+  M + GL P+ +T
Sbjct: 414 EGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVT 473

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           +N +L                  M+  GL PD +T  TLI+       +++      EML
Sbjct: 474 FNTLLDD----------------MLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREML 517

Query: 478 QRGFVPD 484
            +    D
Sbjct: 518 SKAAKTD 524



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 212/386 (54%), Gaps = 16/386 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+  L +M  K + PD  TYN+L++ Y   G L+EA +++  MS  G
Sbjct: 162 IIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHG 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY+ LI+ LCK G    A+E+L+ M+Q   +P+ ATY  LL     K ++ E  
Sbjct: 222 QPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMN 281

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M + GV PD   F+  I  + + G+LD A++ F +M+  GL+PD + Y  +I+G 
Sbjct: 282 NLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGL 341

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A+    +M++ G   D+V +  +++G        +A++LF EM++RG+ P  
Sbjct: 342 CKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTV 401

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             FTT+I    K+G + +A  LFD+M   S+KP++V+YN +I G+   G++++  KL  D
Sbjct: 402 VVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDD 461

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+S  + PN +++  L++                +M+  G+KP + +CNT+I   C  G 
Sbjct: 462 MLSVGLKPNAVTFNTLLD----------------DMLSMGLKPDVATCNTLIDSCCEDGR 505

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTL 386
                    +M+S+    D+++ N +
Sbjct: 506 IEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 38/220 (17%)

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK-------------------- 342
           S+K++P  ++Y ILI+  C +G +  AF    +++  G++                    
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 343 ----------------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG--VDPDSISYN 384
                           P + S   ++KG C      +A + +  M  +G    P+ +SY 
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           T+I+GF +E+ + KA+ L  +M ++G+ PDV+T N I+ G C+   M  +E +L +M +K
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            + PD +TY +L++G++S   LKEA R   +M + G  P+
Sbjct: 186 HIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPN 225



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 38/155 (24%)

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL---------------- 411
           +++  S+ V P +++Y  LI+       ++ AFA + ++   GL                
Sbjct: 1   MARAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCA 60

Query: 412 --------------------VPDVITYNVILTGFCRQGRMHDSELILWRMIEKG--LNPD 449
                                PDV +Y V+L G C + +  ++  ++  M E G    P+
Sbjct: 61  EKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPN 120

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +YTT+I+G   ++ + +A+    EML RG  PD
Sbjct: 121 VVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPD 155


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 217/378 (57%), Gaps = 3/378 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+  +   A   + +M + G  PD VT ++LIN +C+   + +A  L++ M   G
Sbjct: 51  VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 110

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V  YN++I+G CK G  + A E+ D M + G+  D  TYN+L+   C     S+A 
Sbjct: 111 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 170

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  R + P++++F+ +I +F + G+   A+  + EM    + PD   Y  +ING 
Sbjct: 171 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 230

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G V EA +M D M+ KGC+ DVVTYNT++NG C++K + E   LF EM +RG+  D 
Sbjct: 231 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 290

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I G+ + G  + A  +F  M     +P+I TY+ L+ G C    +EKA  L+ +
Sbjct: 291 ITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFEN 347

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M   +I  +  +Y I+I+G C +G+V +A+ L+  +  KG+KP +VS  T+I G+CR   
Sbjct: 348 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 407

Query: 361 ASKADEFLSKMVSEGVDP 378
             K+D    KM  +G+ P
Sbjct: 408 WDKSDLLYRKMQEDGLLP 425



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 223/413 (53%), Gaps = 3/413 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ + K    D        ME  G+  D  +YN +IN  CR      A  ++  M   G
Sbjct: 16  VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 75

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T +SLING C+  R   A +++ +M +MG  PD   YNT++  SC+   +++A 
Sbjct: 76  YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 135

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M R GV  D V++++L+     +G+   A    R+M    +VP+ + +T +I+ +
Sbjct: 136 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 195

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA+K+ +EM  +    DV TYN+++NGLC    + EA  + + M+ +G  PD 
Sbjct: 196 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 255

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ TLI+G CK   +++   LF  M Q+ +  D +TYNT+I G+ + G  + A ++++ 
Sbjct: 256 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 315

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR   PN  +Y IL+ G C    V +A  L+  M    I+  + + N +I G C+ G+
Sbjct: 316 MDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 372

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
              A +    +  +G+ PD +SY T+I+GF R+   DK+  L  KM+  GL+P
Sbjct: 373 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 229/421 (54%), Gaps = 3/421 (0%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P +  ++ +++ + K    D    +   M   G+  D  +YN ++   CR      A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             +M + G  PD+V+ S+LI  F +  ++  A+    +M+  G  PD V+Y  II+G C+
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G V +A+++ D M   G   D VTYN+++ GLC +   ++A  L  +M+ R + P+  T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           FT +I    K+G  ++A+ L++ MT++ + PD+ TYN+LI+G C  G +++A ++   M+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           ++   P+ ++Y  LING+C    V E  +L+ EM  +G+    ++ NTII+GY ++G   
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            A E  S+M S    P+  +Y+ L+ G      ++KA  L   M+   +  D+ TYN+++
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            G C+ G + D+  +   +  KGL PD  +YTT+I+G   +    ++   + +M + G +
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424

Query: 483 P 483
           P
Sbjct: 425 P 425



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 227/428 (53%), Gaps = 3/428 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M Q    P  V ++ +++   +    +    L + M   G+   +++YN +IN LC+  R
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A  V+ +M++ G  PD  T ++L+   C+   + +A ++  +M   G  PD+V ++T
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I    + G ++ A+  F  M+  G+  D V Y  ++ G C +G   +A ++  +M+ + 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            V +V+T+  +++   +    +EA  L+ EM  R V PD +T+ +LI+G C  G +++A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            + D+M  K   PD+VTYNTLI+GFCK   +++  KL+ +M  R +  + I+Y  +I GY
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G    A  ++  M     +P + + + ++ G C +    KA      M    ++ D 
Sbjct: 301 FQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 357

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YN +I+G  +  N++ A+ L   +  +GL PDV++Y  +++GFCR+ +   S+L+  +
Sbjct: 358 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 417

Query: 441 MIEKGLNP 448
           M E GL P
Sbjct: 418 MQEDGLLP 425



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 208/394 (52%), Gaps = 3/394 (0%)

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M+Q    P    ++ +L +  + +N      +F  M   G+  D+ S++ +I    R  +
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
              AL    +M   G  PD V  + +ING+C+   V +A+ +  +M E G   DVV YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           I++G C+  ++ +A +LF+ M   GV  D  T+ +L+ G C  G  + A  L   M  + 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           I P+++T+  +ID F K G+  +A KL+ +M  R + P+  +Y  LING C  G V EA 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           ++   MV KG  P +V+ NT+I G+C+S    +  +   +M   G+  D+I+YNT+I G+
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            +    D A  + S+M+++   P++ TY+++L G C   R+  + ++   M +  +  D 
Sbjct: 301 FQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 357

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +TY  +I+G     N+++A+     +  +G  PD
Sbjct: 358 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 391


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 217/397 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  CK  ++D A+  L EM + GV  + + YN+L++ Y R        +L+  M   G
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGG 197

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V TY  L++ L   G   + + V+DEM    ++ D   Y  ++   CR  N+  A 
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRAS 257

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F E    G+ P+  ++  LI  F + GQ++ A M   +M+  G+  + +++  +I+GY
Sbjct: 258 EVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGY 317

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V  ALK++  M + G  +DV TYNT+  GLCR   + EA  L + M+E+GV P++
Sbjct: 318 CRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNY 377

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI  HCK+G+M +A  LF  M  K   P +VTYN ++DG+ K G + +A +   +
Sbjct: 378 VTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKE 437

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+  +Y  L++G+C  G V  A +L+ EM  +G +P +V+   +I G  + G 
Sbjct: 438 MEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGR 497

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
           + +A +    M+  G+ PD   Y+ L+     +   D
Sbjct: 498 SEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKD 534



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 223/398 (56%), Gaps = 1/398 (0%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +++G CK GR D A+ +LDEM + G+  +   YN+LL    R+++ +  +E+   M   G
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGG 197

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +   + +++ L+   S  G + +      EMK+  +  D  LYT +IN YCR G V  A 
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRAS 257

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++ DE +  G   +  TY  ++NG C+   +  A+ L  +M  RGV  +   F T+I G+
Sbjct: 258 EVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGY 317

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+ G ++ AL +   M +  I+ D+ TYNTL  G C+V  M +A  L   MI + + PNY
Sbjct: 318 CRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNY 377

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LI+ +C  G + EA RL+ EM GKG  P++V+ N ++ GY + G   +A+ F  +
Sbjct: 378 VTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKE 437

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  +G+ PD  +Y +L++G      +D A  L  +M+++G  P+V+ Y  +++G  ++GR
Sbjct: 438 MEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGR 497

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
             ++  +   M++ GL PD S Y+ L+ G +  +N K+
Sbjct: 498 SEEAFQLYDDMLKAGLTPDDSLYSALV-GSLHTDNRKD 534



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 197/377 (52%)

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           C+   + +A  +  EM R GV  + + +++L+  + R     R       M++ G+    
Sbjct: 143 CKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATV 202

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
             YTI+++     G + +   + DEM  K    DV  Y  ++N  CRA  +  A ++F+E
Sbjct: 203 GTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDE 262

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
            +  G+ P+  T+  LI+G CK G M  A  L   M  + +  + + +NT+IDG+C+ G 
Sbjct: 263 CVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGM 322

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           ++ A K+ A M    I  +  +Y  L  G C +  + EA  L + M+ KG+ P  V+  T
Sbjct: 323 VDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTT 382

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I  +C+ GD  +A     +M  +G  P  ++YN +++G++++ ++ +A     +ME +G
Sbjct: 383 LISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKG 442

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           LVPDV TY  ++ G C  G++  +  +   M  +G  P+   YT LI+G   +   +EAF
Sbjct: 443 LVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAF 502

Query: 471 RFHDEMLQRGFVPDDAF 487
           + +D+ML+ G  PDD+ 
Sbjct: 503 QLYDDMLKAGLTPDDSL 519


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 245/456 (53%), Gaps = 1/456 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +    + A  +  +M  +G+ P + T+N L+    +  F E+A+++ N   G  
Sbjct: 101 IINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGN- 159

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+++  +I G C+ G  D+  EVL +M +MGLSP+   Y TL+   C+  ++   +
Sbjct: 160 VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGK 219

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M    V  +  +++ LI  F + G     +  + +MK  G+VP+   Y  +I   
Sbjct: 220 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 279

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G +  A ++ DEM E+G   +VVTYNT++ GLC+ + + EA+ L   M   G+ P+ 
Sbjct: 280 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 339

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI G+C  GN++KA +LF+ M      P + TYN LI GF +         +  +
Sbjct: 340 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 399

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +R +SP+ ++Y IL++      ++ +AF+++  M   G+   +     +I G C  GD
Sbjct: 400 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 459

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    +    + P+ + YNT+I G+ +E +  +A  L+ +M   G+VP+V +YN 
Sbjct: 460 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 519

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            +   C+  +  ++E++L  MIE GL P  S +  +
Sbjct: 520 TIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 229/422 (54%), Gaps = 1/422 (0%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V  + ++IN   +    ++A    ++M+  GL P + T+N LL+   +     +A  +F 
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           E ++  V  D+ SF  +I      G LD+      +M+  GL P+ V+YT +I+G C+NG
Sbjct: 155 E-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            +    ++  +M E   V +  TY  ++NG  +  +  +  +L+ +M   G+ P+ YT+ 
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           ++I   C DG +N A  LFD M ++ +  ++VTYNTLI G C+   + +A +L   M   
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            +SPN ISY  LI+GYCS+G++ +A  L+ +M   G  P+L + N +I G+  + +++  
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 393

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            + + +M + G+ P  ++Y  L++  VR +N++KAF + S ME  GLV D+  Y V++ G
Sbjct: 394 TDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHG 453

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C  G M ++  +   + E  L P+   Y T+I G+  + +   A R   EM + G VP+
Sbjct: 454 LCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 513

Query: 485 DA 486
            A
Sbjct: 514 VA 515



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 238/459 (51%), Gaps = 2/459 (0%)

Query: 27  YPDTV-TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           +P  V  +  +INA+ R    E+A    N M G+GL PG  T+N+L+  L K    ++A 
Sbjct: 91  FPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 150

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            V +E  +  +  D  ++  ++   C    + +  E+  +M   G++P++V ++TLI   
Sbjct: 151 RVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC 209

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +NG ++R    F +M    +V +   YT++ING+ + G   + +++ ++M   G V +V
Sbjct: 210 CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNV 269

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYN+++   C    L  A +LF+EM ERGV  +  T+ TLI G C++  + +A  L   
Sbjct: 270 YTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCR 329

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +  + P++++YNTLIDG+C +G ++KA+ L+  M S   SP+  +Y ILI G+    +
Sbjct: 330 MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKN 389

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
                 +  EM  +G+ P+ V+   ++    RS +  KA +  S M   G+  D   Y  
Sbjct: 390 SAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGV 449

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G     +M +A  L   ++   L P+ + YN ++ G+C++G  + +  +L  M E G
Sbjct: 450 LIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG 509

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + P+ ++Y + I          EA     +M++ G  P 
Sbjct: 510 MVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPS 548



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 188/354 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+  I+  K    +M +  V  +  TY  LIN + + G  ++  +L   M   G
Sbjct: 205 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 264

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TYNS+I   C  G+ + A E+ DEM + G++ +  TYNTL+   C++  + EAE
Sbjct: 265 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 324

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            + C M R G++P+++S++TLI  +   G LD+A   F +MKS+G  P    Y I+I G+
Sbjct: 325 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 384

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                      M  EM  +G     VTY  +++ L R+  + +A  +++ M + G+  D 
Sbjct: 385 SEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADI 444

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y +  LIHG C  G+M +A  LF  + +  +KP+ V YNT+I G+CK G   +A +L  +
Sbjct: 445 YIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKE 504

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
           M    + PN  SY   I   C     TEA  L  +M+  G+KP++   N I K 
Sbjct: 505 MGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 558


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 247/479 (51%), Gaps = 13/479 (2%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           ++  G+      +  LI  Y + G  ++A +   SM      P V+TYN +++ L +K  
Sbjct: 117 LKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNF 176

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              A  V   M+++   P+ AT++ L+   C+  N+ +A  +F EM++RG+ PD  ++  
Sbjct: 177 LLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCV 236

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I    R+ ++D A   F +MK +G+ PD V    ++NG+C    V EA  +     + G
Sbjct: 237 VISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDG 296

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            V+DV  Y+ ++ GL RAK   +   L+ +M+E  V PD Y +T ++ G  + G +  AL
Sbjct: 297 YVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDAL 356

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L + MT+  + PD V YN LI GFC +G + +A  L  ++      PN  +Y ILI+G 
Sbjct: 357 ELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGM 416

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM--------- 371
           C  G   +A  ++ EM   G  P+ V+ N++I G C++G   KA     KM         
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLF 476

Query: 372 --VSEGVDP--DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
             +S+G     DS S   ++        + KA+ ++ ++ + G  P + TYN+++ GFC+
Sbjct: 477 LRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCK 536

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            G  + +  +   M  KGL+PD  TY TLING +     ++A++  D+M + G  PD A
Sbjct: 537 LGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAA 595



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 241/463 (52%), Gaps = 16/463 (3%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+  T++ LI+  C+ G +++A  L + M+ +G+ P  FTY  +I+GLC+  R D A  +
Sbjct: 194 PNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRL 253

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GIFS 146
            D+M   G+ PD  T N LL   C  + + EA  +     + G   D+  +S LI G+F 
Sbjct: 254 FDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFR 313

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
                D  L+Y R+M    + PD  LYTI++ G    G V +AL++ +EM E G V D V
Sbjct: 314 AKRYEDVQLLY-RKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTV 372

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
            YN ++ G C   +L+EA  L  E+     FP+  T++ LI G C++G    A  +F+ M
Sbjct: 373 CYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEM 432

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM-ISRKIS--------PNYI----SY 313
            +    P  VT+N+LIDG CK G++EKA+ L+  M I R  S        P+++    S 
Sbjct: 433 EKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASL 492

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
             ++   C  G + +A+R+  ++   G  P + + N ++ G+C+ G+ + A +   +M  
Sbjct: 493 QKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQF 552

Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
           +G+ PD+++Y TLING +R +  + A+ +  +ME  G  PD   Y  ++T  CR+  +  
Sbjct: 553 KGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPR 612

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           +   LW    + +          I G+  +  +++A R   EM
Sbjct: 613 A-FSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEM 654



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 210/418 (50%), Gaps = 13/418 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +  A     EM Q+G+ PD  TY  +I+  CR   +++A++L + M   G
Sbjct: 202 LIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSG 261

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   T N+L+NG C   R D A  +L    + G   D   Y+ L+    R +   + +
Sbjct: 262 VGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQ 321

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ +M    V PD+  ++ ++   +  G++  AL    EM  +G+VPD V Y ++I G+
Sbjct: 322 LLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGF 381

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA  ++ E+    C  +V TY+ +++G+CR  +  +A ++FNEM + G +P  
Sbjct: 382 CDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSA 441

Query: 241 YTFTTLIHGHCKDGNMNKALNLF---------DIMTQKSIKP----DIVTYNTLIDGFCK 287
            TF +LI G CK G + KA  LF          +  + S  P    D  +   +++  C 
Sbjct: 442 VTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCD 501

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G + KA ++   +     +P   +Y IL+NG+C +G+   A++L+ EM  KG+ P  V+
Sbjct: 502 SGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVT 561

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
             T+I G  R      A +   +M   G  PD+  Y T++    R   + +AF+L  K
Sbjct: 562 YGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLK 619



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 199/426 (46%), Gaps = 17/426 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L +  K+  A   L EM + GV PDTV YN LI  +C  G L EA  L   +S   
Sbjct: 342 MMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHD 401

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY+ LI+G+C+ G    A+E+ +EM ++G  P   T+N+L+   C+   + +A 
Sbjct: 402 CFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAH 461

Query: 121 EIFCEMS---------RRGVAP----DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
            +F +M          R    P    D  S   ++     +G + +A     ++  +G  
Sbjct: 462 LLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDA 521

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
           P    Y I++NG+C+ G    A K+  EM  KG   D VTY T++NGL R +   +A  +
Sbjct: 522 PGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKV 581

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
           F++M + G  PD   + T++   C+   + +A +L+ +   ++I+         I+G+ +
Sbjct: 582 FDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLW-LKYLRNIRSQEDEAIKAIEGYFE 640

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
             E+EKA +   +M  +    +   Y I + G C    V EA +++  +    +  T   
Sbjct: 641 KQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPC 700

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR---EENMDKAFALVS 404
           C  +I    + GD  +A +     + +G        N ++   VR   E   D+A  L+ 
Sbjct: 701 CVKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRRRVANRILTKLVRRKGEMGKDRAIYLLC 760

Query: 405 KMENQG 410
           +M++ G
Sbjct: 761 RMKSVG 766


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 130/393 (33%), Positives = 217/393 (55%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            + + +++G CK G  D A  +LDE+ + G+  +   YN+LL    R+ N      +  E
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  RGV P + +++ L+   SR G + +    + EMK   +  D   Y+ +IN YCR G 
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V  A ++ DE +  G   +  TY  ++NG C+   +  A+ L  +M  RGV  +   F T
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           +I G+C+ G + KAL +  +M +  I+ DI TYNTL  G C+V  ME A KL   M  + 
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           ++PNY+SY  LI+ +   G + EA RL+ +M GKG +P++V+ N +I GY ++G   +A+
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAE 448

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
            F  +M  +G+ PD  +Y  L++G      +D A  L  +M+++G  P+V+ Y  +++G 
Sbjct: 449 RFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGL 508

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
            ++GR  ++  +   M+  GL PD + Y+ L+ 
Sbjct: 509 AKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVG 541



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 223/397 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  CK   +D A   L E+ + GV  +   YN+L+++Y R+   +    L+  M  +G
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY  L++GL + G   + + V DEM +  ++ D   Y+ ++   CR  N+  A 
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRAS 273

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F E    GV P+  ++  LI  F + GQ++ A M   +M+  G+  + +++  +I+GY
Sbjct: 274 EVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY 333

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G V +AL+++  M + G  +D+ TYNT+  GLCR   + +A  L + M E+GV P++
Sbjct: 334 CRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNY 393

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++TTLI  H K+G+M +A  LF  M  K  +P +VTYN +IDG+ K G + +A +   +
Sbjct: 394 VSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKE 453

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+  +Y  L++G+C  G V  A RL+ EM  +G KP +V+   ++ G  + G 
Sbjct: 454 MEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGR 513

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
           + +A +    M++ G+ PD   Y+ L+     +   D
Sbjct: 514 SEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKD 550



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 209/398 (52%), Gaps = 3/398 (0%)

Query: 28  PDTVT---YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           P +VT    + +++ +C+ G +++A  L++ +   G+      YNSL++   ++   D  
Sbjct: 143 PASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAV 202

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             +L EM   G+ P   TY  L+    R  ++S+ E ++ EM R+ VA D+  +S +I  
Sbjct: 203 AGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINA 262

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + R G + RA   F E    G+ P+   Y  +ING+C+ G +  A  +  +M  +G   +
Sbjct: 263 YCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHN 322

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            + +NT+++G CR  M+ +A ++   M + G+  D YT+ TL  G C+   M  A  L  
Sbjct: 323 QIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLH 382

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           IM +K + P+ V+Y TLI    K G+M +A +L+ DM  +   P+ ++Y ++I+GY   G
Sbjct: 383 IMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNG 442

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA R   EM  KG+ P + +   ++ G+C +G    A     +M   G  P+ ++Y 
Sbjct: 443 SIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYT 502

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            L++G  +E   ++AF L   M   GL PD   Y+V++
Sbjct: 503 ALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 199/377 (52%)

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           C+  ++ +A  +  E+ R GV  +   +++L+  ++R    D      +EM++ G+ P  
Sbjct: 159 CKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTV 218

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
             YTI+++G  R G + +   + DEM  K    DV  Y+ ++N  CR   +  A ++F+E
Sbjct: 219 GTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDE 278

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
            +  GV P+  T+  LI+G CK G +  A  L   M  + +  + + +NT+IDG+C+ G 
Sbjct: 279 CVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGM 338

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           +EKA ++ A M    I  +  +Y  L  G C +  + +A +L + M  KG+ P  VS  T
Sbjct: 339 VEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTT 398

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I  + + GD  +A      M  +G  P  ++YN +I+G+++  ++ +A     +ME +G
Sbjct: 399 LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKG 458

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           LVPD+ TY  ++ G C  G++  +  +   M  +G  P+   YT L++G   +   +EAF
Sbjct: 459 LVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAF 518

Query: 471 RFHDEMLQRGFVPDDAF 487
           + +D+ML  G  PDD  
Sbjct: 519 QLYDDMLAAGLTPDDTL 535



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 5/133 (3%)

Query: 358 SGDASKADEFLSKMVSE---GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
           +G    A + L K ++     V P  +S + +++GF +  ++D A  L+ ++   G+  +
Sbjct: 125 AGQLPAAADLLGKAIASCPASVTP--LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLN 182

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
              YN +L  + RQ        +L  M  +G+ P   TYT L++G     ++ +    +D
Sbjct: 183 ACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYD 242

Query: 475 EMLQRGFVPDDAF 487
           EM ++    D  F
Sbjct: 243 EMKRKNVAGDVYF 255


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 248/472 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  +   A   L EME  G  P  VTYN+LI+AY R+G LE+A +L N M  KG
Sbjct: 312 LLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKG 371

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP VFTY +L++G  K G+   A ++ +EM   G  P+  T+N L+     +   +E  
Sbjct: 372 IKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMM 431

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F ++     +PDIV+++TL+ +F +NG        F+EMK AG VP+   +  +I+ Y
Sbjct: 432 KVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSY 491

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A+ +   MLE G   D+ +YN +L  L R  +  +++ +  EM +    P+ 
Sbjct: 492 SRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNE 551

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+H +     + +   L + +    I+P  V   TL+    K   + +  + + +
Sbjct: 552 LTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLE 611

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R  SP+  +   +++ Y     V +A  +   M   G  P+L + N+++  Y RS +
Sbjct: 612 LRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSAN 671

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +++E L +++++G+ PD ISYNT+I  + R   M  A  ++S+M   G  PD+ITYN 
Sbjct: 672 FERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNT 731

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            +  +       ++  ++  MI+ G  P++STY ++++ +   N   EA  F
Sbjct: 732 FIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMF 783



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 250/502 (49%), Gaps = 37/502 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFL-EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           M+  G+ PD+ TYNTLI+  CR G L EEA  ++  M   G  P   TYN+L++   K  
Sbjct: 262 MKSAGIAPDSYTYNTLISC-CRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSR 320

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A EVL EM   G  P   TYN+L+    R   + +A E+  +M  +G+ PD+ +++
Sbjct: 321 RSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYT 380

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  F + G+   A+  F EM++ G  P+   +  +I  +   G   E +K+ +++   
Sbjct: 381 TLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTF 440

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
            C  D+VT+NT+L+   +  M +E   +F EM   G  P+  TF TLI  + + G+ ++A
Sbjct: 441 QCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQA 500

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + ++  M +  + PD+ +YN ++    + G  +++ K+ A+M   +  PN ++Y  L++ 
Sbjct: 501 MAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHA 560

Query: 320 Y---------CSMGH--------------------------VTEAFRLWYEMVGKGIKPT 344
           Y         C++                            + E  R + E+  +G  P 
Sbjct: 561 YANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPD 620

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + + N ++  Y R    +KA+E L  M   G  P   +YN+L+  + R  N +++  ++ 
Sbjct: 621 ITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILR 680

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++  +G+ PD+I+YN ++  +CR GRM D+  +L  M E G  PD  TY T I  + + +
Sbjct: 681 EILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADS 740

Query: 465 NLKEAFRFHDEMLQRGFVPDDA 486
              EA      M++ G  P+ +
Sbjct: 741 MFVEAIDVVCYMIKHGCKPNQS 762



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/521 (25%), Positives = 248/521 (47%), Gaps = 38/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  ++ +A   L  + + G   D   Y ++I A+   G   EA  +   M   G
Sbjct: 171 IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230

Query: 61  LKPGVFTYNSLINGLCKKG-RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-SE 118
            KP + TYN ++N   K G   ++   ++D M   G++PD+ TYNTL +  CR+ N+  E
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTL-ISCCRRGNLYEE 289

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +  EM   G +PD V+++ L+ ++ ++ +   A+   +EM+  G  P  V Y  +I+
Sbjct: 290 AAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLIS 349

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            Y R+G + +AL+++++M+EKG   DV TY T+L+G  +A     A  +F EM   G  P
Sbjct: 350 AYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKP 409

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF  LI  H   G   + + +F+ +      PDIVT+NTL+  F + G   + + ++
Sbjct: 410 NICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVF 469

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M      P   ++  LI+ Y   G   +A  ++  M+  G+ P L S N ++    R 
Sbjct: 470 KEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARG 529

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS-------------- 404
           G   ++++ L++M      P+ ++Y +L++ +   + +++  AL                
Sbjct: 530 GLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLL 589

Query: 405 ---------------------KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
                                ++  +G  PD+ T N +++ + R+  +  +  IL  M  
Sbjct: 590 KTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKR 649

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G  P  +TY +L+  +    N + +     E+L +G  PD
Sbjct: 650 GGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPD 690



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 168/353 (47%), Gaps = 11/353 (3%)

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
            + +I I  + G++  A      +   G   D   YT +I  +  NG   EA+ +  +M 
Sbjct: 168 IAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKME 227

Query: 198 EKGCVMDVVTYNTILN-----GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
           E GC   ++TYN ILN     G+   KM+     L + M   G+ PD YT+ TLI   C+
Sbjct: 228 EVGCKPTLITYNVILNVYGKMGMPWNKMV----GLVDRMKSAGIAPDSYTYNTLI-SCCR 282

Query: 253 DGNM-NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
            GN+  +A  +   M      PD VTYN L+D + K    ++A ++  +M      P+ +
Sbjct: 283 RGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIV 342

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  LI+ Y   G + +A  L  +MV KGIKP + +  T++ G+ ++G    A +   +M
Sbjct: 343 TYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEM 402

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            +EG  P+  ++N LI          +   +   ++     PD++T+N +L+ F + G  
Sbjct: 403 RNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMD 462

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +   +   M   G  P+R T+ TLI+ +    +  +A   +  ML+ G  PD
Sbjct: 463 SEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPD 515



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 82/162 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+   +   +  A   L  M++ G  P   TYN+L+  Y R    E + +++  +  KG
Sbjct: 627 MVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKG 686

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + +YN++I   C+ GR   A  VL EM + G +PD  TYNT +          EA 
Sbjct: 687 IRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAI 746

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
           ++ C M + G  P+  ++++++  + +  + D A M+   ++
Sbjct: 747 DVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLR 788



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 50/94 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C++ ++  A   L EM + G  PD +TYNT I +Y  +    EA  ++  M   G
Sbjct: 697 VIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHG 756

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            KP   TYNS+++  CK  R D A   ++ + ++
Sbjct: 757 CKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKL 790


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 135/414 (32%), Positives = 228/414 (55%), Gaps = 3/414 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  +   A  FL +M + G  PD VT+ +LIN +C    +EEA  ++N M   G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V  Y ++I+ LCK G  + A  + D+M   G+ PD   Y +L+   C      +A+
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M++R + PD+++F+ LI  F + G+   A   + EM    + P+   YT +ING+
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V EA +M   M  KGC  DVV Y +++NG C+ K + +A  +F EM ++G+  + 
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI G  + G  N A  +F  M  + + P+I TYN L+   C  G+++KA  ++ D
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412

Query: 301 MISRK---ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           M  R+   ++PN  +Y +L++G C  G + +A  ++ +M  + +   +++   II+G C+
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           +G    A      + S+GV P+ ++Y T+I+G  RE    +A  L  KM+  G+
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 229/440 (52%), Gaps = 3/440 (0%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           EA  L   M      P +  +  L+N + K  + D    + D +  MG+S D  T N L+
Sbjct: 55  EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
              C+      A     +M + G  PDIV+F++LI  F    +++ A+    +M   G+ 
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
           PD V+YT II+  C+NG V  AL + D+M   G   DVV Y +++NGLC +    +AD L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
              M +R + PD  TF  LI    K+G    A  L++ M + SI P+I TY +LI+GFC 
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G +++A +++  M ++   P+ ++Y  LING+C    V +A +++YEM  KG+    ++
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
             T+I+G+ + G  + A E  S MVS GV P+  +YN L++       + KA  +   M+
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414

Query: 408 NQ---GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            +   G+ P++ TYNV+L G C  G++  + ++   M ++ ++    TYT +I G     
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG 474

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
            +K A      +  +G  P+
Sbjct: 475 KVKNAVNLFCSLPSKGVKPN 494



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 247/456 (54%), Gaps = 3/456 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +  L+N   +    +    L + +   G+   ++T N L+N  C+  +   A   
Sbjct: 70  PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L +M+++G  PD  T+ +L+   C    M EA  +  +M   G+ PD+V ++T+I    +
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           NG ++ AL  F +M++ G+ PD V+YT ++NG C +G   +A  +   M ++    DV+T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N +++   +     +A++L+NEM+   + P+ +T+T+LI+G C +G +++A  +F +M 
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K   PD+V Y +LI+GFCK  +++ A K++ +M  + ++ N I+Y  LI G+  +G   
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA---DEFLSKMVSEGVDPDSISYN 384
            A  ++  MV +G+ P + + N ++   C +G   KA    E + K   +GV P+  +YN
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L++G      ++KA  +   M  + +   +ITY +I+ G C+ G++ ++  +   +  K
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           G+ P+  TYTT+I+G   +    EA     +M + G
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 239/450 (53%), Gaps = 3/450 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N + K  K D        ++  GV  D  T N L+N +C+      A   +  M   G
Sbjct: 78  LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T+ SLING C   R + A  ++++M++MG+ PD   Y T++   C+  +++ A 
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F +M   G+ PD+V +++L+     +G+   A    R M    + PD + +  +I+ +
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G  L+A ++ +EM+      ++ TY +++NG C    + EA  +F  M  +G FPD 
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+LI+G CK   ++ A+ +F  M+QK +  + +TY TLI GF +VG+   A ++++ 
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK---GIKPTLVSCNTIIKGYCR 357
           M+SR + PN  +Y +L++  C  G V +A  ++ +M  +   G+ P + + N ++ G C 
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +G   KA      M    +D   I+Y  +I G  +   +  A  L   + ++G+ P+V+T
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           Y  +++G  R+G  H++ ++  +M E G++
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 202/385 (52%), Gaps = 3/385 (0%)

Query: 103 YNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
           Y  +L         +EA ++F  M      P I+ F+ L+ + ++  + D  +     ++
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
             G+  D     +++N +C++     A     +M++ G   D+VT+ +++NG C    + 
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           EA  + N+M+E G+ PD   +TT+I   CK+G++N AL+LFD M    I+PD+V Y +L+
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +G C  G    A+ L   M  RKI P+ I++  LI+ +   G   +A  L+ EM+   I 
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P + +  ++I G+C  G   +A +    M ++G  PD ++Y +LINGF + + +D A  +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +M  +GL  + ITY  ++ GF + G+ + ++ +   M+ +G+ P+  TY  L++    
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399

Query: 463 QNNLKEAFRFHDEMLQR---GFVPD 484
              +K+A    ++M +R   G  P+
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPN 424


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 147/453 (32%), Positives = 232/453 (51%), Gaps = 12/453 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   + + A+  + EM +   +P+ VT+ T I A+C+ G L+ A +L+  M   G
Sbjct: 225 VLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYG 284

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  Y++L+NG  + GR D A ++L  ML     P+T  YN  L   C      E  
Sbjct: 285 CMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVG 341

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R+   P+  +FSTLI    +N   + A+    +M+  G +PD V Y  II+ +
Sbjct: 342 ELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCF 401

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                  +ALK+ + ML   C  D +++N +L  LCRA+   +A +L  +ML+     + 
Sbjct: 402 SEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNE 458

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI   C++G +  A+ +F++M +    PDIVTY++LI+GF + G  + A  L+  
Sbjct: 459 MTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRS 518

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R    +  SY   + G C      +A  L  +MV K   P  V+ N +I   C+ G 
Sbjct: 519 MPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGL 575

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A E   +M   G+ PD  +YN LING+  +  +D A   +S M  +   PD I+YN 
Sbjct: 576 VNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCE---PDTISYNS 632

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           IL G CR  R  D+E ++  M+ K   P+  T+
Sbjct: 633 ILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 154/485 (31%), Positives = 249/485 (51%), Gaps = 16/485 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A+  L  ++  G   D V++NTL+  YCR+G L +A +++ +    G
Sbjct: 125 LIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDAERVLEAARASG 183

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V TY +LI+G C+ GR     + L  +  M ++PDT TYNT+L   C  +   EAE
Sbjct: 184 -AANVVTYTALIDGYCRSGR---LTDALRLIASMPVAPDTYTYNTVLKGLCFAKQWEEAE 239

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R    P+ V+F+T I  F +NG LDRA+    +M   G +PD V+Y+ ++NG+
Sbjct: 240 ELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGF 299

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G V +ALK+   ML   C  + V YN  L GLC A    E  +L  EM+ +   P+ 
Sbjct: 300 SEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPND 356

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+TLI+  C++     A+ + + M +    PD+V+YNT+I  F +    + A KL   
Sbjct: 357 ATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNS 416

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   P+ IS+  ++   C      +A  L  +M+ +      ++ N +I   C++G 
Sbjct: 417 MLCK---PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQ 473

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK-AFALVSKMENQGLVPDVITYN 419
              A E    M      PD ++Y++LINGF  E+ +DK AF L   M  +    D+ +YN
Sbjct: 474 VKDAIEMFELMPKYRCTPDIVTYSSLINGF-SEQGLDKVAFDLFRSMPCRA---DIFSYN 529

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             L G C   R  D+  ++  M+ K   P+  T+  LIN    +  +  A   +++M + 
Sbjct: 530 ATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKY 589

Query: 480 GFVPD 484
           G  PD
Sbjct: 590 GITPD 594



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 207/418 (49%), Gaps = 11/418 (2%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P V T N LI  LC + R   A+ VL E L+   + D  ++NTL+   CR  ++ +AE +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVL-EALKTSGAADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             E +R   A ++V+++ LI  + R+G+L  AL   R + S  + PD   Y  ++ G C 
Sbjct: 176 L-EAARASGAANVVTYTALIDGYCRSGRLTDAL---RLIASMPVAPDTYTYNTVLKGLCF 231

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
                EA ++  EM+   C  + VT+ T +   C+  +L  A +L  +M + G  PD   
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           ++TL++G  + G ++ AL L   M     +P+ V YN  + G C  G  ++  +L A+M+
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
            +   PN  ++  LIN  C       A  +  +M   G  P +VS NTII  +     A 
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACAD 408

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            A + L+ M+ +   PD+IS+N ++    R E    A  L++KM  +    + +T+N+++
Sbjct: 409 DALKLLNSMLCK---PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILI 465

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
              C+ G++ D+  +   M +    PD  TY++LING   Q   K AF     M  R 
Sbjct: 466 DSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRA 523


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 138/414 (33%), Positives = 218/414 (52%), Gaps = 1/414 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TY+ L+  LCK G  D AK V D M   G+ PD++    L+    R   +  A+    E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G+      ++ L+ +  +   +D A++ FRE      VPD   + I+I G CR G +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE-MLERGVFPDFYTFTT 245
            +A +    M   GC  D+V+YNT++NG CR   +++  DL  E ML +GV PD  T+T+
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           +I G+CK G+M  A  LFD M    IKP+  T+N LIDGF KVG M  A  ++  M+   
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ +++  LI+GYC  G V +  +LW EM  + + P + +   +I   C+     +A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
            FL  + S  V P    YN +I+GF +   +D+A  +V++M+ +   PD IT+ +++ G 
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           C +GRM ++    ++MIE    PD  T  +LI+  +      EA +     LQ+
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 217/414 (52%), Gaps = 1/414 (0%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           TY+ L+   C+ G  + A  + + M   G+ P       L++   + G+ D AK  L+E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              G+      YN LL    ++  + EA  +F E       PD+ SF+ LI    R G++
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK-MRDEMLEKGCVMDVVTYNT 210
           D+A  +F+ M + G  PD V Y  +ING+CR   + +    ++++ML KG   DV+TY +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           I++G C+   +  A +LF+EM+  G+ P+ +TF  LI G  K GNM  A+ +++ M    
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
             PD+VT+ +LIDG+C+ GE+ +  KLW +M  R +SPN  +Y +LIN  C    + EA 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
                +    + P     N +I G+C++G   +A+  +++M  +   PD I++  LI G 
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             +  M +A +   KM     VPD IT N +++   + G  +++  I    ++K
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 212/385 (55%), Gaps = 1/385 (0%)

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           TY+ L+   C+      A+ +F  M   G+ PD      L+  ++R G+LD A  +  E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
              G+     +Y  ++N   +   V EA+ +  E LE   V DV ++N ++ GLCR   +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTYNT 280
            +A + F  M   G FPD  ++ TLI+G C+   ++K  +L  + M  K + PD++TY +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           +I G+CK+G+M+ A++L+ +M+S  I PN  ++ +LI+G+  +G++  A  ++ +M+  G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
             P +V+  ++I GYCR G+ ++  +   +M    + P+  +Y  LIN   +E  + +A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
             +  +++  +VP    YN ++ GFC+ G++ ++  I+  M EK   PD+ T+T LI G+
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDD 485
             +  + EA     +M++   VPD+
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDE 495



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 204/389 (52%), Gaps = 1/389 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LCK    DSAK+    M   G+ PD+     L+++Y R G L+ A   +N +   G+K  
Sbjct: 119 LCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVS 178

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
            F YN+L+N L K+   D A  +  E L+    PD  ++N L+   CR   + +A E F 
Sbjct: 179 PFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQ 238

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-MKSAGLVPDNVLYTIIINGYCRN 183
            M   G  PDIVS++TLI  F R  ++ +     +E M   G+ PD + YT II+GYC+ 
Sbjct: 239 NMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKL 298

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G +  A ++ DEM+  G   +  T+N +++G  +   +  A  ++ +ML  G  PD  TF
Sbjct: 299 GDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTF 358

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           T+LI G+C++G +N+ L L++ M  +++ P++ TY  LI+  CK   + +A      + S
Sbjct: 359 TSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
            ++ P    Y  +I+G+C  G V EA  +  EM  K  +P  ++   +I G C  G   +
Sbjct: 419 SEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVE 478

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           A     KM+     PD I+ N+LI+  ++
Sbjct: 479 AISTFYKMIEINCVPDEITINSLISCLLK 507



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 161/298 (54%), Gaps = 1/298 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS-MSGK 59
           ++  LC+  +ID A  F   M   G +PD V+YNTLIN +CR   + +   L+   M  K
Sbjct: 220 LIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK 279

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P V TY S+I+G CK G    A E+ DEM+  G+ P+  T+N L+    +  NM  A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ +M   G  PD+V+F++LI  + R G++++ L  + EMK   L P+   Y ++IN 
Sbjct: 340 MVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINA 399

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+   + EA      +     V     YN +++G C+A  + EA+ +  EM E+   PD
Sbjct: 400 LCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
             TFT LI G+C  G M +A++ F  M + +  PD +T N+LI    K G   +A+++
Sbjct: 460 KITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 147/270 (54%), Gaps = 1/270 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCE-MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++N  C+ ++I      L E M  KGV PD +TY ++I+ YC+ G ++ A +L + M   
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+KP  FT+N LI+G  K G    A  + ++ML +G  PD  T+ +L+   CR+  +++ 
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++ EM  R ++P++ +++ LI    +  ++  A  + R +KS+ +VP   +Y  +I+G
Sbjct: 375 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 434

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G V EA  +  EM EK C  D +T+  ++ G C    + EA   F +M+E    PD
Sbjct: 435 FCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPD 494

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
             T  +LI    K G  N+A  +     QK
Sbjct: 495 EITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 125/246 (50%), Gaps = 1/246 (0%)

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
           F T+  L+   CK G  + A  +FD M    I PD      L+  + ++G+++ A     
Sbjct: 109 FNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLN 168

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           ++    I  +   Y  L+N       V EA  L+ E +     P + S N +I+G CR G
Sbjct: 169 EVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIG 228

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK-MENQGLVPDVITY 418
           +  KA EF   M + G  PD +SYNTLINGF R   + K   L+ + M  +G+ PDVITY
Sbjct: 229 EIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             I++G+C+ G M  +  +   M+  G+ P+  T+  LI+G     N++ A   +++ML 
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348

Query: 479 RGFVPD 484
            G +PD
Sbjct: 349 LGCLPD 354



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 1/180 (0%)

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I+  + +Y +L+   C +G    A  ++  M   GI P       ++  Y R G    A 
Sbjct: 105 INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAK 164

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
            FL+++   G+      YN L+N  V++  +D+A  L  +      VPDV ++N+++ G 
Sbjct: 165 NFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGL 224

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR-FHDEMLQRGFVPD 484
           CR G +  +      M   G  PD  +Y TLING    N + +      ++ML +G  PD
Sbjct: 225 CRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPD 284


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 245/456 (53%), Gaps = 1/456 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +    + A  +  +M  +G+ P + T+N L+    +  F E+A+++ N   G  
Sbjct: 88  IINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGN- 146

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V+++  +I G C+ G  D+  EVL +M +MGLSP+   Y TL+   C+  ++   +
Sbjct: 147 VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGK 206

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M    V  +  +++ LI  F + G     +  + +MK  G+VP+   Y  +I   
Sbjct: 207 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 266

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G +  A ++ DEM E+G   +VVTYNT++ GLC+ + + EA+ L   M   G+ P+ 
Sbjct: 267 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 326

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++ TLI G+C  GN++KA +LF+ M      P + TYN LI GF +         +  +
Sbjct: 327 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 386

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +R +SP+ ++Y IL++      ++ +AF+++  M   G+   +     +I G C  GD
Sbjct: 387 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 446

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +    +    + P+ + YNT+I G+ +E +  +A  L+ +M   G+VP+V +YN 
Sbjct: 447 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 506

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            +   C+  +  ++E++L  MIE GL P  S +  +
Sbjct: 507 TIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 229/422 (54%), Gaps = 1/422 (0%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V  + ++IN   +    ++A    ++M+  GL P + T+N LL+   +     +A  +F 
Sbjct: 82  VLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 141

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           E ++  V  D+ SF  +I      G LD+      +M+  GL P+ V+YT +I+G C+NG
Sbjct: 142 E-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 200

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            +    ++  +M E   V +  TY  ++NG  +  +  +  +L+ +M   G+ P+ YT+ 
Sbjct: 201 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 260

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           ++I   C DG +N A  LFD M ++ +  ++VTYNTLI G C+   + +A +L   M   
Sbjct: 261 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 320

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            +SPN ISY  LI+GYCS+G++ +A  L+ +M   G  P+L + N +I G+  + +++  
Sbjct: 321 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 380

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            + + +M + G+ P  ++Y  L++  VR +N++KAF + S ME  GLV D+  Y V++ G
Sbjct: 381 TDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHG 440

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C  G M ++  +   + E  L P+   Y T+I G+  + +   A R   EM + G VP+
Sbjct: 441 LCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 500

Query: 485 DA 486
            A
Sbjct: 501 VA 502



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 238/459 (51%), Gaps = 2/459 (0%)

Query: 27  YPDTV-TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           +P  V  +  +INA+ R    E+A    N M G+GL PG  T+N+L+  L K    ++A 
Sbjct: 78  FPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 137

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            V +E  +  +  D  ++  ++   C    + +  E+  +M   G++P++V ++TLI   
Sbjct: 138 RVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC 196

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +NG ++R    F +M    +V +   YT++ING+ + G   + +++ ++M   G V +V
Sbjct: 197 CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNV 256

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYN+++   C    L  A +LF+EM ERGV  +  T+ TLI G C++  + +A  L   
Sbjct: 257 YTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCR 316

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +  + P++++YNTLIDG+C +G ++KA+ L+  M S   SP+  +Y ILI G+    +
Sbjct: 317 MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKN 376

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
                 +  EM  +G+ P+ V+   ++    RS +  KA +  S M   G+  D   Y  
Sbjct: 377 SAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGV 436

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G     +M +A  L   ++   L P+ + YN ++ G+C++G  + +  +L  M E G
Sbjct: 437 LIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG 496

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + P+ ++Y + I          EA     +M++ G  P 
Sbjct: 497 MVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPS 535



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 188/354 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+  I+  K    +M +  V  +  TY  LIN + + G  ++  +L   M   G
Sbjct: 192 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 251

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V+TYNS+I   C  G+ + A E+ DEM + G++ +  TYNTL+   C++  + EAE
Sbjct: 252 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 311

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            + C M R G++P+++S++TLI  +   G LD+A   F +MKS+G  P    Y I+I G+
Sbjct: 312 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 371

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                      M  EM  +G     VTY  +++ L R+  + +A  +++ M + G+  D 
Sbjct: 372 SEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADI 431

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y +  LIHG C  G+M +A  LF  + +  +KP+ V YNT+I G+CK G   +A +L  +
Sbjct: 432 YIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKE 491

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
           M    + PN  SY   I   C     TEA  L  +M+  G+KP++   N I K 
Sbjct: 492 MGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 545


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 138/414 (33%), Positives = 218/414 (52%), Gaps = 1/414 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TY+ L+  LCK G  D AK V D M   G+ PD++    L+    R   +  A+    E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G+      ++ L+ +  +   +D A++ FRE      VPD   + I+I G CR G +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE-MLERGVFPDFYTFTT 245
            +A +    M   GC  D+V+YNT++NG CR   +++  DL  E ML +GV PD  T+T+
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           +I G+CK G+M  A  LFD M    IKP+  T+N LIDGF KVG M  A  ++  M+   
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ +++  LI+GYC  G V +  +LW EM  + + P + +   +I   C+     +A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
            FL  + S  V P    YN +I+GF +   +D+A  +V++M+ +   PD IT+ +++ G 
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           C +GRM ++    ++MIE    PD  T  +LI+  +      EA +     LQ+
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 217/414 (52%), Gaps = 1/414 (0%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           TY+ L+   C+ G  + A  + + M   G+ P       L++   + G+ D AK  L+E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              G+      YN LL    ++  + EA  +F E       PD+ SF+ LI    R G++
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK-MRDEMLEKGCVMDVVTYNT 210
           D+A  +F+ M + G  PD V Y  +ING+CR   + +    ++++ML KG   DV+TY +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           I++G C+   +  A +LF+EM+  G+ P+ +TF  LI G  K GNM  A+ +++ M    
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
             PD+VT+ +LIDG+C+ GE+ +  KLW +M  R +SPN  +Y +LIN  C    + EA 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
                +    + P     N +I G+C++G   +A+  +++M  +   PD I++  LI G 
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             +  M +A +   KM     VPD IT N +++   + G  +++  I    ++K
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 212/385 (55%), Gaps = 1/385 (0%)

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           TY+ L+   C+      A+ +F  M   G+ PD      L+  ++R G+LD A  +  E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
              G+     +Y  ++N   +   V EA+ +  E LE   V DV ++N ++ GLCR   +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTYNT 280
            +A + F  M   G FPD  ++ TLI+G C+   ++K  +L  + M  K + PD++TY +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           +I G+CK+G+M+ A++L+ +M+S  I PN  ++ +LI+G+  +G++  A  ++ +M+  G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
             P +V+  ++I GYCR G+ ++  +   +M    + P+  +Y  LIN   +E  + +A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
             +  +++  +VP    YN ++ GFC+ G++ ++  I+  M EK   PD+ T+T LI G+
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDD 485
             +  + EA     +M++   VPD+
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDE 495



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 204/389 (52%), Gaps = 1/389 (0%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LCK    DSAK+    M   G+ PD+     L+++Y R G L+ A   +N +   G+K  
Sbjct: 119 LCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVS 178

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
            F YN+L+N L K+   D A  +  E L+    PD  ++N L+   CR   + +A E F 
Sbjct: 179 PFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQ 238

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-MKSAGLVPDNVLYTIIINGYCRN 183
            M   G  PDIVS++TLI  F R  ++ +     +E M   G+ PD + YT II+GYC+ 
Sbjct: 239 NMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKL 298

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G +  A ++ DEM+  G   +  T+N +++G  +   +  A  ++ +ML  G  PD  TF
Sbjct: 299 GDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTF 358

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
           T+LI G+C++G +N+ L L++ M  +++ P++ TY  LI+  CK   + +A      + S
Sbjct: 359 TSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
            ++ P    Y  +I+G+C  G V EA  +  EM  K  +P  ++   +I G C  G   +
Sbjct: 419 SEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVE 478

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVR 392
           A     KM+     PD I+ N+LI+  ++
Sbjct: 479 AISTFYKMIEINCVPDEITINSLISCLLK 507



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 161/298 (54%), Gaps = 1/298 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS-MSGK 59
           ++  LC+  +ID A  F   M   G +PD V+YNTLIN +CR   + +   L+   M  K
Sbjct: 220 LIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK 279

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+ P V TY S+I+G CK G    A E+ DEM+  G+ P+  T+N L+    +  NM  A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ +M   G  PD+V+F++LI  + R G++++ L  + EMK   L P+   Y ++IN 
Sbjct: 340 MVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINA 399

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+   + EA      +     V     YN +++G C+A  + EA+ +  EM E+   PD
Sbjct: 400 LCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
             TFT LI G+C  G M +A++ F  M + +  PD +T N+LI    K G   +A+++
Sbjct: 460 KITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 147/270 (54%), Gaps = 1/270 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCE-MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++N  C+ ++I      L E M  KGV PD +TY ++I+ YC+ G ++ A +L + M   
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G+KP  FT+N LI+G  K G    A  + ++ML +G  PD  T+ +L+   CR+  +++ 
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++ EM  R ++P++ +++ LI    +  ++  A  + R +KS+ +VP   +Y  +I+G
Sbjct: 375 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 434

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G V EA  +  EM EK C  D +T+  ++ G C    + EA   F +M+E    PD
Sbjct: 435 FCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPD 494

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
             T  +LI    K G  N+A  +     QK
Sbjct: 495 EITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 125/246 (50%), Gaps = 1/246 (0%)

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
           F T+  L+   CK G  + A  +FD M    I PD      L+  + ++G+++ A     
Sbjct: 109 FNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLN 168

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           ++    I  +   Y  L+N       V EA  L+ E +     P + S N +I+G CR G
Sbjct: 169 EVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIG 228

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK-MENQGLVPDVITY 418
           +  KA EF   M + G  PD +SYNTLINGF R   + K   L+ + M  +G+ PDVITY
Sbjct: 229 EIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             I++G+C+ G M  +  +   M+  G+ P+  T+  LI+G     N++ A   +++ML 
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348

Query: 479 RGFVPD 484
            G +PD
Sbjct: 349 LGCLPD 354



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 1/180 (0%)

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
           I+  + +Y +L+   C +G    A  ++  M   GI P       ++  Y R G    A 
Sbjct: 105 INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAK 164

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
            FL+++   G+      YN L+N  V++  +D+A  L  +      VPDV ++N+++ G 
Sbjct: 165 NFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGL 224

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR-FHDEMLQRGFVPD 484
           CR G +  +      M   G  PD  +Y TLING    N + +      ++ML +G  PD
Sbjct: 225 CRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPD 284


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 239/442 (54%), Gaps = 24/442 (5%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           EAF L      +  +P  F+ N L++ L    R D A+      L+  +SPD  T+N ++
Sbjct: 134 EAFLLAGDAHPRH-RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVI 192

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY-----FREMK 162
              C+   + +A ++  ++   G+AP +V+++T+I  + + G+  R  MY      +EM 
Sbjct: 193 SGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGR--MYHVDALLKEMV 250

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
            AG+ P+ V + +++NGYC++     A+++ +EM ++G    VVTY+ ++ GLC    + 
Sbjct: 251 EAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVE 310

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           E   L +EM + G+ P+  T  ++++G CK G M  A    D M QK++KP++VTY  L+
Sbjct: 311 EGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILV 370

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           DG+ ++ +M+ A  +   M  + + PN   Y  LI G+   G       L  EM  KG++
Sbjct: 371 DGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVR 430

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
             +V+ N +I   C  G+  KA + L +M+  G++P  ++YNT+ING+  + N+  A+ +
Sbjct: 431 ADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEI 490

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
            ++ME      +V+TYNV +   CR G+M ++  +L  M+EKGL P+  TY T+  G   
Sbjct: 491 RTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG--- 547

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
                        M+++G+ PD
Sbjct: 548 -------------MMEKGYTPD 556



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 216/396 (54%), Gaps = 3/396 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL    ++D A+       ++ V PD  T+N +I+  C+ G L +A  +   +   G
Sbjct: 156 LLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWG 215

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEV---LDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           L P V TYN++I+G CK+GR  R   V   L EM++ G+SP+  T+N L+   C+  N +
Sbjct: 216 LAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTA 275

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A  +F EM ++G+A  +V++S L+      G+++  +    EMK  GLVP+      ++
Sbjct: 276 AAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVL 335

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG+C+ G + +A    D M +K    +VVTY  +++G  R   + +A  +   M  +GV 
Sbjct: 336 NGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVR 395

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+   +  LI G  ++G+      L D M  K ++ DIVTYN LI   C  GE+ KA KL
Sbjct: 396 PNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKL 455

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M+   + P +++Y  +INGYC  G++  A+ +   M     +  +V+ N  IK  CR
Sbjct: 456 LDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCR 515

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            G   + +E L++M+ +G+ P+ ++Y+T+  G + +
Sbjct: 516 MGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEK 551



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 225/430 (52%), Gaps = 19/430 (4%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   + N L++A      ++ A +   +   + + P +FT+N +I+GLCK G+  +A +V
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 88  LDEMLQMGLSPDTATYNTLLVESC---RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             ++   GL+P   TYNT++   C   R   M   + +  EM   G++P+ V+F+ L+  
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + ++     A+  F EMK  G+    V Y+ ++ G C  G V E +K+ DEM + G V +
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + T N++LNG C+  M+T+A+   + M ++ V P+  T+T L+ G+ +   M  AL + +
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M+ K ++P+   YN LI GF + G+    + L  +M  + +  + ++Y +LI   C  G
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A +L  EM+  G++P  ++ NTII GYC  G+   A E  ++M       + ++YN
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYN 507

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             I    R   M++   L+++M  +GLVP+ +TY+ I  G                M+EK
Sbjct: 508 VFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG----------------MMEK 551

Query: 445 GLNPDRSTYT 454
           G  PD   +T
Sbjct: 552 GYTPDVRGFT 561



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 176/312 (56%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            L EM + G+ P+ VT+N L+N YC++     A ++   M  +G+   V TY++L+ GLC
Sbjct: 245 LLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLC 304

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
            +G+ +   +++DEM  +GL P+ AT N++L   C+K  M++AE     M ++ V P++V
Sbjct: 305 SEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVV 364

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +++ L+  + R  ++  AL     M   G+ P+  +Y  +I G+ RNG       + DEM
Sbjct: 365 TYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEM 424

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             KG   D+VTYN ++  LC    + +A  L +EML  G+ P   T+ T+I+G+C+ GN+
Sbjct: 425 RMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNI 484

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
             A  +   M +   + ++VTYN  I   C++G+ME+ N+L  +M+ + + PN ++Y  +
Sbjct: 485 KSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTI 544

Query: 317 INGYCSMGHVTE 328
             G    G+  +
Sbjct: 545 KEGMMEKGYTPD 556


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 162/553 (29%), Positives = 260/553 (47%), Gaps = 86/553 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV  LC   +I+     +     KG  P+ V YNTLI+ YC++G +E A++L   +  KG
Sbjct: 214 MVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKG 273

Query: 61  LKPGVFTYNSLINGLCKKGRCD-----------------------------------RAK 85
             P + T+ SL+NG CK G  +                                   +AK
Sbjct: 274 FIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAK 333

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           + L EM +    PD  TYNTL+   C +  + EAE++  +  RRG+AP+ ++++ L+  +
Sbjct: 334 DTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGY 393

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G+  +A  Y  EM ++GL  D + Y  +I+G    G V  AL +RD M+ +G + D 
Sbjct: 394 CKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDA 453

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN ++NGL +   L+ A  +  EML++ + PD + + TL+ G  + GN+++A  LF +
Sbjct: 454 NIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQL 513

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKAN------------------------------ 295
           + +K + P +V YN +I GF K G M+ A                               
Sbjct: 514 IIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHN 573

Query: 296 -----KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
                K++  M+ +   PN ++Y  LINGYC  G    A +L+  M   G+KP++V+ + 
Sbjct: 574 MNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSI 633

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV--------RE-----ENMD 397
           +I  +C+     KA  +   M+     P+  +++ L+NGF         RE     EN  
Sbjct: 634 LIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSR 693

Query: 398 KAFA-LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW-RMIEKGLNPDRSTYTT 455
             F    S+M   G       YN IL   C+Q RM  + L L  +M+  GL  D  ++  
Sbjct: 694 SMFEDFFSRMIGDGWTQKAAAYNCILICLCQQ-RMVKTALQLRNKMLAFGLCSDAVSFVA 752

Query: 456 LINGHVSQNNLKE 468
           LI+G   + N KE
Sbjct: 753 LIHGICLEGNSKE 765



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 251/490 (51%), Gaps = 4/490 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG----VYPDTVTYNTLINAYCREGFLEEAFQLMNSM 56
           ++N L K  +I++A     EM  +     +  D  T + ++   C +G +E+  +L+ S 
Sbjct: 175 LLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESR 234

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            GKG  P +  YN+LI+G CKKG  + A ++  ++   G  P   T+ +L+   C+    
Sbjct: 235 WGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMF 294

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
              + +  EM  RG++ ++  ++ +I    + G   +A    +EM      PD V Y  +
Sbjct: 295 EAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTL 354

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           IN +C  G V EA K+ ++ + +G   + +TY  +++G C+    T+A D   EM   G+
Sbjct: 355 INHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGL 414

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
             D  ++  LIHG    G ++ AL + D M  + I PD   YN L++G  K G++  A  
Sbjct: 415 EVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKV 474

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +  +M+ + I+P+   Y  L++G+   G++ EA +L+  ++ KG+ P +V  N +IKG+ 
Sbjct: 475 MLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFS 534

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           +SG    A   + KM      PD  +++T+I+G+V++ NM+    +   M  Q   P+V+
Sbjct: 535 KSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVV 594

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY  ++ G+CR+G    +E +   M   GL P   TY+ LI     +  L +A  + + M
Sbjct: 595 TYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELM 654

Query: 477 LQRGFVPDDA 486
           L     P+DA
Sbjct: 655 LINKCTPNDA 664



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 240/506 (47%), Gaps = 40/506 (7%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-KGLKPGVFTYNSLINGLC 76
           L EM+ K   P     + ++ AY   G +++A ++ + +       P  +  NSL+N L 
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 77  KKGRCDRAKEVLDEMLQM---------------------------------------GLS 97
           K  R + A ++ DEM+                                         G  
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
           P+   YNTL+   C+K  +  A ++F ++  +G  P + +F +L+  F + G  +   + 
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
             EMK  GL  +  +Y  II+   + GF ++A     EM E  C  D+VTYNT++N  C 
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
              + EA+ L  + + RG+ P+  T+T L+HG+CK G   KA +    M+   ++ D+++
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMIS 420

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           Y  LI G    GE++ A  +   M++R I P+   Y +L+NG    G ++ A  +  EM+
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
            + I P      T++ G+ R G+  +A +    ++ +G+DP  + YN +I GF +   MD
Sbjct: 481 DQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMD 540

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            A   + KM     VPD+ T++ I+ G+ +Q  M+    I   M+++   P+  TYT+LI
Sbjct: 541 NAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLI 600

Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVP 483
           NG+  +   K A +    M   G  P
Sbjct: 601 NGYCRKGETKMAEKLFSMMRSHGLKP 626



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 248/482 (51%), Gaps = 25/482 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +++ A+  L +  ++G+ P+ +TY  L++ YC++G   +A   +  MS  G
Sbjct: 354 LINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSG 413

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  + +Y +LI+GL   G  D A  + D M+  G+ PD   YN L+    +K  +S A+
Sbjct: 414 LEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAK 473

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM  + +APD   ++TL+  F R+G LD A   F+ +   GL P  V Y ++I G+
Sbjct: 474 VMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGF 533

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G +  A+   D+M     V D+ T++TI++G  +   +     +F  M+++   P+ 
Sbjct: 534 SKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNV 593

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T+LI+G+C+ G    A  LF +M    +KP +VTY+ LI  FCK  ++ KA   +  
Sbjct: 594 VTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFEL 653

Query: 301 MISRKISPNYISYGILINGYCSM---------GHVTEAFRLWYE-----MVGKGIKPTLV 346
           M+  K +PN  ++  L+NG+ +           ++ E  R  +E     M+G G      
Sbjct: 654 MLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAA 713

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           + N I+   C+      A +  +KM++ G+  D++S+  LI+G   E N  +   ++S  
Sbjct: 714 AYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCD 773

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
            N+G +   + Y++ L  F  +G + ++  IL  MI+  ++P++             NNL
Sbjct: 774 LNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDL-----------NNL 822

Query: 467 KE 468
           KE
Sbjct: 823 KE 824



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 166/332 (50%), Gaps = 5/332 (1%)

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE-KGCVMDVVTYNTILNGLC 216
             EMK+   +P     + ++  Y   G V +AL++   +++    +      N++LN L 
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 217 RAKMLTEADDLFNEMLER----GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           + + +  A  L++EM++R     +  D YT + ++ G C  G +   + L +    K   
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+IV YNTLIDG+CK GE+E A KL+  +  +   P   ++G L+NG+C MG       L
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             EM  +G+   +   N II    + G   KA + L +M     +PD ++YNTLIN F  
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
              +++A  L+ +   +GL P+ +TY  ++ G+C+QG    +   L  M   GL  D  +
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMIS 420

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y  LI+G V    +  A    D M+ RG +PD
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPD 452


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 146/453 (32%), Positives = 234/453 (51%), Gaps = 12/453 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   + + A+  + EM +   +P+ VT+ T I A+C+ G L+ A +L+  M   G
Sbjct: 13  VLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYG 72

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  Y++L+NG  + GR D A ++L+ ML     P+T  YN  L   C      E  
Sbjct: 73  CTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVG 129

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R+   P+  +FSTLI    +N  ++ A+    +M+  G +PD V Y  II+ +
Sbjct: 130 ELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCF 189

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                  +ALK+   ML   C  D +++N +L  LC+AK   +A +L  +ML++    + 
Sbjct: 190 SDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINE 246

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI   C++G +  A+ +F++M +    PDIVTY++LI+GF + G  E A  L+  
Sbjct: 247 MTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRS 306

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R    +  SY   + G C      +A  L  +MV +   P  V+ N +I   C+ G 
Sbjct: 307 MPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGL 363

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +   +M   G+ PD  +YN LING+  +  +D A   +S M  +   PD I+YN 
Sbjct: 364 VNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNS 420

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           IL G CR  R  D+E ++  M+ K   P+  T+
Sbjct: 421 ILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 199/391 (50%), Gaps = 9/391 (2%)

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           M ++PDT TYNT+L   C  +   +AEE+  EM R    P+ V+F+T I  F +NG LDR
Sbjct: 1   MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDR 60

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A+    +M   G  PD ++Y+ ++NG+  +G V EALK+ + ML   C  + V YN  L 
Sbjct: 61  AVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALK 117

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLC A    E  +L  EM+ +   P+  TF+TLI+  C++  +  A+ + + M +    P
Sbjct: 118 GLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMP 177

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D+V+YNT+I  F      + A KL   M+ +   P+ IS+  ++   C      +A  L 
Sbjct: 178 DVVSYNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELV 234

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
            +M+ K  +   ++ N +I   C++G    A E    M      PD ++Y++LINGF  +
Sbjct: 235 AKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQ 294

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
              + AF L   M  +    D+ +YN  L G C   R  D+  ++  M+ +   P+  T+
Sbjct: 295 GLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTF 351

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             LI+    +  +  A   +++M + G  PD
Sbjct: 352 NILISSLCQKGLVNRAIDVYEQMPKYGITPD 382



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 216/423 (51%), Gaps = 41/423 (9%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A C++  +D A   L +M + G  PD + Y+TL+N +   G ++EA +L+N+M     
Sbjct: 49  IRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---C 105

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P    YN+ + GLC  GR +   E++ EM++    P+ AT++TL+   C+   +  A E
Sbjct: 106 RPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVE 165

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  +M + G  PD+VS++T+I  FS   + D AL   + +KS    PD + +  ++   C
Sbjct: 166 VLEQMQKYGYMPDVVSYNTIISCFSDQARADDAL---KLLKSMLCKPDTISFNAVLKCLC 222

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           +     +A+++  +ML+K C ++ +T+N +++ LC+   + +A ++F  M +    PD  
Sbjct: 223 KAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIV 282

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+++LI+G  + G    A +LF  M  ++   DI +YN  + G C     + A +L ADM
Sbjct: 283 TYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADM 339

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL---------------- 345
           ++    PN +++ ILI+  C  G V  A  ++ +M   GI P +                
Sbjct: 340 VTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRL 399

Query: 346 ----------------VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
                           +S N+I+KG CR+     A++ +++M+ +   P+ +++      
Sbjct: 400 DDALKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQL 459

Query: 390 FVR 392
           F++
Sbjct: 460 FIK 462


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 240/465 (51%), Gaps = 4/465 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM  +G  P   T+N ++  +C  G +  A  L+  M   G+ P V +YN LI G C  G
Sbjct: 208 EMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFG 267

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
               A ++ + M + G  P   TYN L+   C +  M EA  +F EM++ G+  + ++F+
Sbjct: 268 WSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFN 327

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            LI  ++++GQ+D+A   +REM++ GLVPD+  + II     + G+  + +   D     
Sbjct: 328 VLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSH 387

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
              M     + ++  LC    L +A +L    +E+GV      F  LI  + K+G   +A
Sbjct: 388 ---MSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEA 444

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             L+ IM +  + P   T+N LI G C  G +++A  L   M+S+    +  S+ I ++ 
Sbjct: 445 SELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS-TSFTICLDA 503

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y   G+   A + W +M   G++   ++ +  I G CR    ++A +  ++M S G+ P+
Sbjct: 504 YFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPN 563

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +I+YN++I+   +  NM +A  LV  M   GLVPD+ T N+++ G CR+G++   + +L 
Sbjct: 564 NITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLL 623

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   GL PD  TY T+IN +    ++  A  F ++ML  G  PD
Sbjct: 624 DMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPD 668



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 251/516 (48%), Gaps = 34/516 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C    +  A   L  M + G+ PD  +YN LI  +C  G+  +AF++   M   G
Sbjct: 224 MLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEGMHRSG 283

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN L++ LC +GR   A+ + DEM Q+G+  +T T+N L+    +   M +A 
Sbjct: 284 CEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQAS 343

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----MYFREMKSAGL---------- 166
             + EM  RG+ PD  +F+ +     + G   + +    M+   M + GL          
Sbjct: 344 AAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWD 403

Query: 167 -----------------VPDNVL-YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
                            VP  V  +  +I  Y + G   EA ++   M + G      T+
Sbjct: 404 HRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTF 463

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N ++ GLC    L EA  L   M+ +G +    +FT  +  + +DGN   AL  +D M  
Sbjct: 464 NYLIMGLCNQGRLDEAQLLLEHMVSKG-YCLSTSFTICLDAYFRDGNAVGALKCWDDMGN 522

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             ++ D + ++  I+G C++  + +A + +A+M SR I PN I+Y  +I+  C  G++TE
Sbjct: 523 IGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTE 582

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A +L   M   G+ P + + N +I G CR G     D  L  M S G+ PD+++YNT+IN
Sbjct: 583 ALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIIN 642

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
            + R ++M+ A   ++KM   G  PD+ TYN+ +   CR   ++ +  +L  ++    +P
Sbjct: 643 AYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSP 702

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  TY TL++G +  + L  A      +++  F P+
Sbjct: 703 NSVTYNTLMDG-ICSDVLDRAMILTGRLIKMAFKPN 737



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 230/461 (49%), Gaps = 34/461 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LC + ++  A+    EM Q G+  +T+T+N LI+ Y + G +++A      M  +G
Sbjct: 294 LVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARG 353

Query: 61  LKPGVFTYN--------------------------------SLINGLCKKGRCDRAKEVL 88
           L P   T+N                                 L+  LC   R D A E+L
Sbjct: 354 LVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELL 413

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
              ++ G+      +N L+    ++    EA E++  M++ G+AP   +F+ LI      
Sbjct: 414 LGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQ 473

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+LD A +    M S G       +TI ++ Y R+G  + ALK  D+M   G   D + +
Sbjct: 474 GRLDEAQLLLEHMVSKGYCLSTS-FTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAF 532

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           +  +NGLCR   + EA   F EM  RG+ P+  T+ ++I   CK GNM +AL L   M Q
Sbjct: 533 SAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQ 592

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + PDI T N LIDG C+ G+++  + L  DM S  ++P+ ++Y  +IN YC    +  
Sbjct: 593 SGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNS 652

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A     +M+  G +P + + N  +   CR+   ++A + L ++V+    P+S++YNTL++
Sbjct: 653 AMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMD 712

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           G +  + +D+A  L  ++      P+ IT NV L+ FC+QG
Sbjct: 713 G-ICSDVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQG 752



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 200/386 (51%), Gaps = 2/386 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC DH++D A   L    ++GV      +N LI AY +EG  EEA +L   M+  G
Sbjct: 396 LVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLG 455

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P   T+N LI GLC +GR D A+ +L+ M+  G    T ++   L    R  N   A 
Sbjct: 456 LAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SFTICLDAYFRDGNAVGAL 514

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + + +M   G+  D ++FS  I    R   ++ A   F EM S G+VP+N+ Y  II+  
Sbjct: 515 KCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISAL 574

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EALK+   M + G V D+ T N +++GLCR   L   D+L  +M   G+ PD 
Sbjct: 575 CKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDT 634

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I+ +C+  +MN A+N  + M     +PDI TYN  +   C+   + +A KL  +
Sbjct: 635 VTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDE 694

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +++   SPN ++Y  L++G CS   +  A  L   ++    KP  ++ N  +  +C+ G 
Sbjct: 695 LVAVDCSPNSVTYNTLMDGICS-DVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQGF 753

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTL 386
            ++A  +  K+  +    D  + N +
Sbjct: 754 GNRALMWAEKLREDSFVFDGATRNII 779



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 203/479 (42%), Gaps = 66/479 (13%)

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++     G    A +VL  + + G +P  +  + LL    R   +  A  +F EM+  G 
Sbjct: 155 LHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGP 214

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P + +F+ ++  F   G +  A      M  +G+ PD   Y I+I G+C  G+  +A K
Sbjct: 215 RPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFK 274

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           M + M   GC   VVTYN +++ LC    + EA  LF+EM + G+  +  TF  LI G+ 
Sbjct: 275 MFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYA 334

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTL-------------------------IDG-- 284
           K G M++A   +  M  + + PD  T+N +                          DG  
Sbjct: 335 KSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLD 394

Query: 285 -----FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
                 C    ++ A +L    I + +      +  LI  Y   G   EA  L+  M   
Sbjct: 395 MLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKL 454

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE------------------------- 374
           G+ P+  + N +I G C  G   +A   L  MVS+                         
Sbjct: 455 GLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGAL 514

Query: 375 ---------GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
                    G+  D I+++  ING  R + +++A+   ++M ++G+VP+ ITYN I++  
Sbjct: 515 KCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISAL 574

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+ G M ++  ++  M + GL PD  T   LI+G   +  LK       +M   G  PD
Sbjct: 575 CKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPD 633



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 174/407 (42%), Gaps = 66/407 (16%)

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F   G    AL     ++ +G  P     + ++    R+G V  A  + +EM  +G    
Sbjct: 158 FLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGPRPS 217

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + T+N +L G C   M+  A  L   M + G+ PD  ++  LI GHC  G    A  +F+
Sbjct: 218 LATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFE 277

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M +   +P +VTYN L+D  C  G M +A +L+ +M    I  N I++ +LI+GY   G
Sbjct: 278 GMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSG 337

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK----ADEFLSKMVSEGVD--- 377
            + +A   + EM  +G+ P   + N I     + G A++     D F S M ++G+D   
Sbjct: 338 QMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLV 397

Query: 378 ------------------------PDSIS-YNTLINGFVREENMDKAFALVSKMENQGLV 412
                                   P  ++ +N LI  + +E   ++A  L   M   GL 
Sbjct: 398 CRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLA 457

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEK---------------------------- 444
           P   T+N ++ G C QGR+ +++L+L  M+ K                            
Sbjct: 458 PSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGALKCW 517

Query: 445 ------GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
                 GL  D   ++  ING    + + EA++   EM  RG VP++
Sbjct: 518 DDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNN 564



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 153/346 (44%), Gaps = 34/346 (9%)

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           + ++ +   G   EAL +   +   G    +   + +L  L R+  +  A ++F EM   
Sbjct: 153 LALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAE 212

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P   TF  ++ G C  G +  A  L  IM +  I PD+ +YN LI G C  G    A
Sbjct: 213 GPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDA 272

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            K++  M      P  ++Y IL++  C  G + EA RL+ EM   GI+   ++ N +I G
Sbjct: 273 FKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDG 332

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNT----------------------------- 385
           Y +SG   +A     +M + G+ PDS ++N                              
Sbjct: 333 YAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADG 392

Query: 386 ---LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
              L+     +  +D A+ L+     QG+   V  +N ++  + ++G +H+    L+R++
Sbjct: 393 LDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEG-LHEEASELYRIM 451

Query: 443 EK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            K GL P  ST+  LI G  +Q  L EA    + M+ +G+    +F
Sbjct: 452 NKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSF 497



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 133/278 (47%), Gaps = 37/278 (13%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +N LC+   ++ A     EM  +G+ P+ +TYN++I+A C+ G + EA +L+ +M   GL
Sbjct: 536 INGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGL 595

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P ++T N LI+GLC++G+      +L +M   GL+PDT TYNT++   CR ++M+ A  
Sbjct: 596 VPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMN 655

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING-- 179
              +M   G  PDI +++  +    RN  L++A     E+ +    P++V Y  +++G  
Sbjct: 656 FMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGIC 715

Query: 180 --------------------------------YCRNGFVLEALKMRDEMLEKGCVMDVVT 207
                                           +C+ GF   AL   +++ E   V D  T
Sbjct: 716 SDVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRALMWAEKLREDSFVFDGAT 775

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
            N I     R +M  +     NE + R +F +F  F T
Sbjct: 776 RNII--DWARREM-EDDPKANNEDIGRCMFLEFLMFMT 810



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 80/172 (46%)

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           +Y +  + ++ + + G   EA  +   +   G  P+L + + +++   RSG+   A    
Sbjct: 147 HYCALRLALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVF 206

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M +EG  P   ++N ++ GF     +  A  L+  M   G+ PDV +YN+++ G C  
Sbjct: 207 EEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVF 266

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           G   D+  +   M   G  P   TY  L++    +  + EA R  DEM Q G
Sbjct: 267 GWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVG 318


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 264/484 (54%), Gaps = 11/484 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LCK  ++  A   +  +  + +  DTVTYNT+I+  C  G  +EA+Q ++ M   G
Sbjct: 135 LIHSLCKVGQLSFA---ISLLRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIG 191

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   ++N+LI+G CK G   RAK ++DE+ ++ L       +T+L+ S    N+   E
Sbjct: 192 ILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNL-----ITHTILISSYY--NLHAIE 244

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E + +M   G  PD+V+FS++I    ++G++    +  REM+  G+ P++V YT +++  
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSL 304

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      AL +  +M+ +G  +D+V Y  ++ GL +A  L EA+  F  +LE    P+ 
Sbjct: 305 FKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNV 364

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T L+ G CK G+++ A  +   M +KS+ P++VTY+++I+G+ K G +E+A  L   
Sbjct: 365 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRK 424

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + PN  +YG +I+G    G    A  +  EM   G++      + ++    R G 
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGR 484

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +    +  MVS+GV  D I+Y +LI+ F +  + + A +   +M+ + +  DV++YNV
Sbjct: 485 IKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNV 544

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G  + G++  ++     M EKG+ PD +T+  ++N    Q + +   +  D+M   G
Sbjct: 545 LISGLLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCG 603

Query: 481 FVPD 484
             P 
Sbjct: 604 IKPS 607



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/531 (28%), Positives = 268/531 (50%), Gaps = 49/531 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK   + SA+  + +M +K V+P+ VTY+++IN Y ++G LEEA  LM  M  + 
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQN 429

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTY ++I+GL K G+ + A E+  EM  +G+  +    + L+    R   + E +
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  +GV  D +++++LI +F + G  + AL +  EM+   +  D V Y ++I+G 
Sbjct: 490 GLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGL 549

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V      +  M EKG   D+ T+N ++N   +         L+++M   G+ P  
Sbjct: 550 LKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSL 608

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY---------------------- 278
                ++   C+ G M +A+++ D M    I P++ TY                      
Sbjct: 609 MICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHET 668

Query: 279 -------------NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                        NTLI   CK+G   KA  +  DM +R   P+ +++  L++GY    H
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSH 728

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A   +  M+  GI P + + NTII+G   +G   + +++LS+M S G+ PD  +YN 
Sbjct: 729 VGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNA 788

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  +  N  ++  +  +M   GLVP   TYNV+++ F + G+M  +  ++  M ++ 
Sbjct: 789 LISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRR 848

Query: 446 LNPDRSTYTTLING--------HVSQNN----LKEAFRFHDEML-QRGFVP 483
           ++P+ STY T+I+G         V  N     L EA     EM+ ++G++P
Sbjct: 849 VSPNTSTYCTMISGLCKLCTHPEVEWNKKAMYLAEAKGLLKEMIEEKGYIP 899



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 249/520 (47%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCKD K+    + L EME+ GVYP+ VTY TL+++  +      A  L + M  +G
Sbjct: 265 IINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRG 324

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   +  Y  L+ GL K G    A++    +L+    P+  TY  L+   C+  ++S AE
Sbjct: 325 IPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAE 384

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M  + V P++V++S++I  + + G L+ A+   R+M+   +VP+   Y  +I+G 
Sbjct: 385 FIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGL 444

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A +M  EM   G   +    + ++N L R   + E   L  +M+ +GV  D 
Sbjct: 445 FKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDH 504

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+LI    K G+   AL+  + M +K +  D+V+YN LI G  K G++  A+  +  
Sbjct: 505 INYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKV-GADWAYKG 563

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I P+  ++ I++N     G      +LW +M   GIKP+L+ CN ++   C  G 
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGK 623

Query: 361 ASKADEFLSKM-----------------------------------VSEGVDPDSISYNT 385
             +A + L +M                                   +S G+      YNT
Sbjct: 624 MKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI    +     KA  ++  ME +G VPD +T+N ++ G+     +  +      M+E G
Sbjct: 684 LIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAG 743

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++P+ +TY T+I G      +KE  ++  EM  RG  PDD
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDD 783



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 233/453 (51%), Gaps = 11/453 (2%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC-DRAKEVLDEM 91
           ++TL   Y   G L  A + +++M   G+ P +  +NSLI+     G   D+   V  +M
Sbjct: 61  FHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKM 120

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
           +  G+SPD    N L+   C+   +S A  +   +  R ++ D V+++T+I     +G  
Sbjct: 121 IACGVSPDVFALNVLIHSLCKVGQLSFAISL---LRNRVISVDTVTYNTVISGLCEHGLA 177

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D A  +  EM   G++PD V +  +I+G+C+ G    A  + DE+ E    ++++T+  +
Sbjct: 178 DEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISE----LNLITHTIL 233

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++       + EA   + +M+  G  PD  TF+++I+  CKDG + +   L   M +  +
Sbjct: 234 ISSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGV 290

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P+ VTY TL+D   K  +   A  L++ M+ R I  + + Y +L+ G    G + EA +
Sbjct: 291 YPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEK 350

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
            +  ++     P +V+   ++ G C++GD S A+  +++M+ + V P+ ++Y+++ING+V
Sbjct: 351 TFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYV 410

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           ++  +++A +L+ KME+Q +VP+  TY  ++ G  + G+   +  +   M   G+  +  
Sbjct: 411 KKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNY 470

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
               L+N       +KE      +M+ +G   D
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 503



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 220/451 (48%), Gaps = 14/451 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L +  +I   K  + +M  KGV  D + Y +LI+ + + G  E A      M  K 
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKE 534

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V +YN LI+GL K G+   A      M + G+ PD AT+N ++    ++ +     
Sbjct: 535 MPWDVVSYNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGIL 593

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ +M   G+ P ++  + ++G+    G++  A+    +M    + P+   Y I ++  
Sbjct: 594 KLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMS 653

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++       K  + +L  G  +    YNT++  LC+  M  +A  +  +M  RG  PD 
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDT 713

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  L+HG+    ++ KAL+ + +M +  I P++ TYNT+I G    G +++  K  ++
Sbjct: 714 VTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSE 773

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR + P+  +Y  LI+G   +G+  E+  ++ EM+  G+ P   + N +I  + + G 
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGK 833

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVR-------EEN-----MDKAFALVSKM-E 407
             +A E + +M    V P++ +Y T+I+G  +       E N     + +A  L+ +M E
Sbjct: 834 MLQATELMKEMGKRRVSPNTSTYCTMISGLCKLCTHPEVEWNKKAMYLAEAKGLLKEMIE 893

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
            +G +P   T   I   F + G   D+E  L
Sbjct: 894 EKGYIPYNQTIYWISAAFSKPGMKVDAERFL 924


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 260/518 (50%), Gaps = 48/518 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K++  +     L E++   +   +  ++ LI AY   G  E+A +    M    
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP +F +N +++ L +K     A  V ++ML+  L+PD  TY  L+   C+     +A 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ RG+ P+ + +S ++    +  ++  A   F +M+++G   D + Y +++NG+
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGF 278

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G++ +A  +   + + G ++ V+ Y  ++NGL RA+   EA   + +ML   + PD 
Sbjct: 279 CKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDV 338

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I G  ++G + +AL L   MT++ ++PD + YN LI GFC +G +++A  L  +
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLE 398

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR--- 357
           +      PN  +Y ILI G C  G + +A  ++ EM   G  P++V+ N++I G C+   
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458

Query: 358 ---------------------------------------------SGDASKADEFLSKMV 372
                                                        SG   KA + L ++V
Sbjct: 459 LEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLV 518

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
             GV PD  +YN LINGF +  N++ AF L  +M+ +G +PD +TY  ++ G  R GR  
Sbjct: 519 DSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNE 578

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           D+  I  +M++KG  P+ STY T++     +NN+  A 
Sbjct: 579 DALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 217/458 (47%), Gaps = 53/458 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  KI  A+    +M   G   D +TYN L+N +C+ G+L++AF L+  ++  G
Sbjct: 239 VLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDG 298

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              GV  Y  LINGL +  R + A     +ML+  + PD   Y  ++    ++  ++EA 
Sbjct: 299 HILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEAL 358

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+ RG+ PD + ++ LI  F   G LD A     E+      P+N  Y+I+I G 
Sbjct: 359 TLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGM 418

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM--------- 231
           C+NG + +A  +  EM + GC+  VVT+N+++NGLC+A  L EA  LF +M         
Sbjct: 419 CKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLF 478

Query: 232 -------------------LER--------------------GVFPDFYTFTTLIHGHCK 252
                              +ER                    GV PD  T+  LI+G CK
Sbjct: 479 LRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCK 538

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            GN+N A  LF  M  K   PD VTY TLIDG  + G  E A +++  M+ +   P   +
Sbjct: 539 FGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESST 598

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVG--KGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           Y  ++   C   +++ A  +W + +   +G +   V    ++     + +   A   L +
Sbjct: 599 YKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVR---VVAESFDNEELQTAIRRLLE 655

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           M  +  + D   Y   + G V+ +   +AFA+ S +++
Sbjct: 656 MDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKD 693



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 117/244 (47%), Gaps = 19/244 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LC+   I  A   L ++   GV PD  TYN LIN +C+ G +  AF+L   M  KG
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY +LI+GL + GR + A E+ ++M++ G  P+++TY T++  SCR+ N+S A 
Sbjct: 557 HMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616

Query: 121 EIFCEMSR--RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
            ++ +  R  RG   + V    ++     N +L  A+    EM       D   YTI + 
Sbjct: 617 SVWMKYLRDFRGWEDEKVR---VVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLI 673

Query: 179 GY------CRNGFVLEALK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           G       C    +   LK  +  +    CVM       ++  LC  + L  A D+F   
Sbjct: 674 GLVQAKRDCEAFAIFSVLKDFKMNISSASCVM-------LIGRLCMVENLDMAMDVFLFT 726

Query: 232 LERG 235
           LERG
Sbjct: 727 LERG 730


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 248/461 (53%), Gaps = 2/461 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G  P   +YNTL+NA+       +   L       G+ P + TYN LI   CKK   ++A
Sbjct: 109 GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
           +  L+ M + G  PD  +Y+T++ +  +   + +A E+F EMS R VAPD+  ++ LI  
Sbjct: 169 RGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDG 228

Query: 145 FSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
           F +      A+ ++ + ++ + + P+   + I+I+G  + G V + LK+ D M +     
Sbjct: 229 FLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREK 288

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D+ TY+++++GLC    + +A+ +FNE++ER  F D  T+ T++ G C+ G + ++L L+
Sbjct: 289 DLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW 348

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            IM Q++   +IV+YN LI G  + G++++A  +W  M ++  + +  +YGI I+G C  
Sbjct: 349 RIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVN 407

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G+V +A  +  E+  KG    + +  +II   C+     +A   + +M   GV+ +S   
Sbjct: 408 GYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVC 467

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N LI G +R+  +  A  L+  M   G +P V++YN+++ G C  G+  ++   +  M+E
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            GL PD  TY+ L+ G      ++ A     + LQ G  PD
Sbjct: 528 NGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPD 568



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 244/457 (53%), Gaps = 2/457 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           KDHK+ + +++   +E   VYP+  T+N +I+   + G +++  ++ + M     +  ++
Sbjct: 233 KDHKM-AMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLY 291

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           TY+SLI+GLC +G  D+A+ V +E+++     D  TYNT+L   CR   + E+ E++  M
Sbjct: 292 TYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIM 351

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            +R  + +IVS++ LI     NG++D A M +R M + G   DN  Y I I+G C NG+V
Sbjct: 352 EQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYV 410

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +AL +  E+  KG  +DV  Y +I++ LC+ + L EA +L  EM + GV  + +    L
Sbjct: 411 NKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNAL 470

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I G  +D  ++ A  L   M +    P +V+YN LI G C+ G+  +A+    +M+   +
Sbjct: 471 IGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGL 530

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            P+  +Y IL+ G C    +  A  LW++ +  G++P ++  N +I G C  G    A  
Sbjct: 531 KPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMT 590

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            ++ M       + ++YNTL+ G+ +  + ++A  +   M   GL PD+I+YN IL G C
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLC 650

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
              R+  +          G+ P   T+  L+   V++
Sbjct: 651 LCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNR 687



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 248/519 (47%), Gaps = 35/519 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  +  +    +      E  GV P+  TYN LI   C++   E+A   +N M  +G
Sbjct: 120 LLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEG 179

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP VF+Y+++IN L K G+ D A E+ DEM +  ++PD   YN L+    ++++   A 
Sbjct: 180 FKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAM 239

Query: 121 EIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +++ ++     V P++ + + +I   S+ G++D  L  +  MK      D   Y+ +I+G
Sbjct: 240 QLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHG 299

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER----- 234
            C  G V +A  + +E++E+   +DVVTYNT+L G CR   + E+ +L+  M +R     
Sbjct: 300 LCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNI 359

Query: 235 -----------------------------GVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                        G   D  T+   IHG C +G +NKAL +   
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQE 419

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +  K    D+  Y ++ID  CK   +E+A+ L  +M    +  N      LI G      
Sbjct: 420 VESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +++A  L   M   G  PT+VS N +I G C +G   +A  F+ +M+  G+ PD  +Y+ 
Sbjct: 480 LSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSI 539

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+ G  R+  ++ A  L  +    GL PDV+ +N+++ G C  G++ D+  ++  M  + 
Sbjct: 540 LLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              +  TY TL+ G+    +   A      M + G  PD
Sbjct: 600 CTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPD 638



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 240/484 (49%), Gaps = 2/484 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++N L K  K+D A     EM ++ V PD   YN LI+ + +E   + A QL + +    
Sbjct: 190 VINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDS 249

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P V T+N +I+GL K GR D   ++ D M Q     D  TY++L+   C + N+ +A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKA 309

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           E +F E+  R    D+V+++T++G F R G++  +L  +R M+    V + V Y I+I G
Sbjct: 310 ESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKG 368

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
              NG + EA  +   M  KG   D  TY   ++GLC    + +A  +  E+  +G   D
Sbjct: 369 LLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLD 428

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            Y + ++I   CK   + +A NL   M++  ++ +    N LI G  +   +  A+ L  
Sbjct: 429 VYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMR 488

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M      P  +SY ILI G C  G   EA     EM+  G+KP L + + ++ G CR  
Sbjct: 489 GMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDR 548

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A E   + +  G++PD + +N LI+G      +D A  +++ ME++    +++TYN
Sbjct: 549 KIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++ G+ +    + + +I   M + GL PD  +Y T++ G    + +  A  F D+    
Sbjct: 609 TLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNH 668

Query: 480 GFVP 483
           G  P
Sbjct: 669 GIFP 672



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 202/391 (51%), Gaps = 1/391 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC +  +D A+    E+ ++  + D VTYNT++  +CR G ++E+ +L   M  + 
Sbjct: 296 LIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN 355

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               + +YN LI GL + G+ D A  +   M   G + D  TY   +   C    +++A 
Sbjct: 356 -SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKAL 414

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E+  +G   D+ +++++I    +  +L+ A    +EM   G+  ++ +   +I G 
Sbjct: 415 GVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R+  + +A  +   M + GC+  VV+YN ++ GLC A    EA     EMLE G+ PD 
Sbjct: 475 IRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDL 534

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++ L+ G C+D  +  AL L+    Q  ++PD++ +N LI G C VG+++ A  + A+
Sbjct: 535 KTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMAN 594

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R  + N ++Y  L+ GY  +     A  +W  M   G++P ++S NTI+KG C    
Sbjct: 595 MEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHR 654

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
            S A EF     + G+ P   ++N L+   V
Sbjct: 655 VSYAIEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 106/220 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L +D ++  A + +  M + G  P  V+YN LI   C  G   EA   +  M   G
Sbjct: 470 LIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENG 529

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP + TY+ L+ GLC+  + + A E+  + LQ GL PD   +N L+   C    + +A 
Sbjct: 530 LKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAM 589

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  R    ++V+++TL+  + +    +RA + +  M   GL PD + Y  I+ G 
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGL 649

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM 220
           C    V  A++  D+    G    V T+N ++  +   KM
Sbjct: 650 CLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRKM 689


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 246/499 (49%), Gaps = 21/499 (4%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC   K + A   L EM +KG  PDT TY  +I   C+   +E++F L   M   G+ P 
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V+TY  LI+  CK G  ++A+   DEM  +G SP+  TY  LL    + + + +A +IF 
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
            M      P+ V++S LI    + G++ +A                  YF    +  + P
Sbjct: 547 RMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAP 606

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V Y  +I+G C+   V +A ++ D ML  GC  + + Y+ +++G C+   +  A ++F
Sbjct: 607 NVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVF 666

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
             M + G  P  +T+T+LI    KDG ++ A+ +   M   S  P++VTY  +IDG  KV
Sbjct: 667 LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKV 726

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           GE+EKA  L + M  +  SPN ++Y  LI+G    G    + +L+ +M  KG  P  V+ 
Sbjct: 727 GEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTY 786

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             +I   C +G   +A   L +M           Y+  + GF ++     +  L+ +ME+
Sbjct: 787 RVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKK--FIASLGLLEEMES 844

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST---YTTLINGHVSQNN 465
              VP    Y +++  F + GR+  +  +   ++E   + + ++   Y +LI      + 
Sbjct: 845 HETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQ 904

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           ++EAF  + EM ++G VPD
Sbjct: 905 VEEAFTLYTEMTRKGIVPD 923



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 241/506 (47%), Gaps = 22/506 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L +    + A  FL  M      P+ VTY TL++ + ++       +++N M  +G
Sbjct: 277 MISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEG 336

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    +NSL++G C  G    A ++ + M   G  P    YN  +   C +E +  AE
Sbjct: 337 CNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAE 396

Query: 121 ------EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
                 +++ EM       + V+ +         G+ ++A    +EM   G VPD   YT
Sbjct: 397 LLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYT 456

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I   C+   V ++  +  EM   G   DV TY  +++  C+A ++ +A   F+EM   
Sbjct: 457 KVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSV 516

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P+  T+T L+H + K   + +A ++F  M   +  P+ VTY+ LIDG CK GE++KA
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKA 576

Query: 295 NKLWADMISRK----------------ISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            +++  +I                   I+PN ++YG LI+G C    V++A  L   M+ 
Sbjct: 577 CEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLA 636

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
            G +P  +  + +I G+C+ G    A E   +M   G  P   +Y +LI+   ++  +D 
Sbjct: 637 AGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDL 696

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  ++S+M N    P+V+TY  ++ G  + G +  +  +L  M EKG +P+  TYT LI+
Sbjct: 697 AMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALID 756

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G         + +   +M  +G  P+
Sbjct: 757 GLGKTGKADASLKLFKQMNSKGCAPN 782



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 222/540 (41%), Gaps = 89/540 (16%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N L+   CR G  +EA + +  +   G +P   TYN+L+  L   G+ +    V  EM  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 94  MGLSPDTATYNTLLVESCR------KENMSEAEE-----IFCEMSRRGV----------- 131
            G   D +T        C+        NM E E+     + C     G+           
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMS 292

Query: 132 ----------APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
                      P++V++ TL+  F +  Q          M + G  P+  L+  +++GYC
Sbjct: 293 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYC 352

Query: 182 RNGFVLEALKM-----------------------------------------RDEMLEKG 200
             G    A K+                                          +EML   
Sbjct: 353 NAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAAS 412

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           CV++ V        LC      +A  +  EM+ +G  PD  T+T +I   C+   + K+ 
Sbjct: 413 CVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSF 472

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            LF  M +  + PD+ TY  LID FCK G +E+A   + +M S   SPN ++Y  L++ Y
Sbjct: 473 LLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAY 532

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS------- 373
                + +A  +++ MV     P  V+ + +I G C++G+  KA E   K++        
Sbjct: 533 LKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVES 592

Query: 374 ----EGVD-----PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
               EG D     P+ ++Y  LI+G  + + +  A  L+  M   G  P+ I Y+ ++ G
Sbjct: 593 DFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDG 652

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           FC+ G++ +++ +  RM + G  P   TYT+LI+       L  A +   EML     P+
Sbjct: 653 FCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPN 712



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 207/430 (48%), Gaps = 21/430 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K  ++  A      M     YP+ VTY+ LI+  C+ G +++A ++   + G  
Sbjct: 528 LLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTS 587

Query: 61  ----------------LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
                           + P V TY +LI+GLCK  +   A E+LD ML  G  P+   Y+
Sbjct: 588 GNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYD 647

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   +  A+E+F  M++ G  P + ++++LI    ++G+LD A+    EM + 
Sbjct: 648 ALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLND 707

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V YT +I+G  + G + +AL +   M EKGC  +VVTY  +++GL +      +
Sbjct: 708 SCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADAS 767

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             LF +M  +G  P++ T+  LI+  C  G +++A  L D M        +  Y+  + G
Sbjct: 768 LKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQG 827

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           F K  +   +  L  +M S +  P    YG+LI+ +   G +  A  L  E+V       
Sbjct: 828 FSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLN 885

Query: 345 LVSCN---TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
           + S     ++I+  C +    +A    ++M  +G+ PD I + +L+ G +     D+A  
Sbjct: 886 MTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQ 945

Query: 402 LVSKMENQGL 411
           L     ++G+
Sbjct: 946 LCYGRCHEGV 955



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 141/354 (39%), Gaps = 44/354 (12%)

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           L  +++   CR+G   EAL+    + + G     VTYN ++  L  A  +     +  EM
Sbjct: 171 LLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEM 230

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
              G   D  T        CK G    ALN+ +   ++    D V    +I G  +    
Sbjct: 231 SASGFCMDRSTIGYFAQALCKVGRWADALNMLE---KEDFNLDTVLCTQMISGLMEASLF 287

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
            +A      M      PN ++Y  L++G+          R+   M+ +G  P     N++
Sbjct: 288 NEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSL 347

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM--------------- 396
           + GYC +GD + A +  ++M + G  P  ++YN  I     +E +               
Sbjct: 348 VHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEE 407

Query: 397 --------------------------DKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
                                     +KAF ++ +M  +G VPD  TY  ++T  C+  +
Sbjct: 408 MLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKK 467

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +  S L+   M   G+NPD  TYT LI+       +++A  + DEM   G  P+
Sbjct: 468 VEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPN 521


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 134/398 (33%), Positives = 217/398 (54%), Gaps = 3/398 (0%)

Query: 63  PGVFTYNS---LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           PG  T  S   +++G CK GR D A+ +LDEM + G+  +   YN LL    R++N +  
Sbjct: 128 PGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARV 187

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+  EM   GV P + +++ L+   S  G + +    F E+K   +  D   Y+ +IN 
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINA 247

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YCR G V  A ++ DE +  G   +  TY  ++NG C+   +  A+ L  +M  RGV  +
Sbjct: 248 YCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHN 307

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F T+I G+C+ G ++KAL +  +M +  I+ D+ TYNTL  G C+V  ME A KL  
Sbjct: 308 QIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLH 367

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M    +  NY+SY  LI+ +   G + EA RL+ +M GKG +P++V+ N +I GY +SG
Sbjct: 368 IMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSG 427

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A+ F  +M  +G+ PD  +Y  L++G      +D A  L  +M+ +G  P+V+ Y 
Sbjct: 428 SIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYT 487

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
            +++G  ++GR  ++      M+  GL PD + Y+ L+
Sbjct: 488 ALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 221/398 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  CK  ++D A+  L EM + GV  +   YN L++ Y R+       +++  M   G
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY  L++GL   G   + + V DE+ +  ++ D   Y+ ++   CR  N+  A 
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRAS 258

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F E    G+ P+  ++  LI  F + GQ++ A M   +M+  G+  + +++  +I+GY
Sbjct: 259 EVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY 318

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR+G V +AL+++  M   G  +DV TYNT+  GLCR   + +A  L + M E GV  ++
Sbjct: 319 CRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNY 378

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++TTLI  H K+G+M +A  LF  M  K  +P +VTYN +IDG+ K G + +A +   +
Sbjct: 379 VSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKE 438

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+  +Y  L++G+C  G V  A RL+ EM  +G KP +V+   +I G  + G 
Sbjct: 439 MEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGR 498

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           + +A +F   M++ G+ PD   Y+ L+     ++  D+
Sbjct: 499 SEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDE 536



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 206/392 (52%)

Query: 31  VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDE 90
           ++ + +++ +C+ G +++A +L++ M   G+K     YN L++   ++    R  EVL E
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 91  MLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
           M   G+ P   TY  L+       ++S+ E +F E+ R+ VA D+  +S +I  + R G 
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           + RA   F E    G+ P+   Y  +ING+C+ G +  A  +  +M  +G   + + +NT
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +++G CR  M+ +A ++   M   G+  D YT+ TL  G C+   M  A  L  IMT+  
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
           ++ + V+Y TLI    K G+M +A +L+ DM  +   P+ ++Y ++I+GY   G + EA 
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAE 433

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           R   EM  KG+ P + +   ++ G+C +G    A     +M   G  P+ ++Y  LI+G 
Sbjct: 434 RFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGL 493

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            +E   ++AF     M   GL PD   Y++++
Sbjct: 494 AKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 197/377 (52%)

Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           C+   M +A  +  EM R GV  +   ++ L+  ++R     R     +EM+S G+ P  
Sbjct: 144 CKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTV 203

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
             YTI+++G    G + +   + DE+  K    DV  Y+ ++N  CRA  +  A ++F+E
Sbjct: 204 GTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDE 263

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
            +  G+ P+  T+  LI+G CK G +  A  L   M  + +  + + +NT+IDG+C+ G 
Sbjct: 264 CVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGM 323

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
           ++KA ++ A M    I  +  +Y  L  G C +  + +A +L + M   G++   VS  T
Sbjct: 324 VDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTT 383

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I  + + GD  +A      M  +G  P  ++YN +I+G+++  ++ +A     +ME +G
Sbjct: 384 LISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKG 443

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           LVPDV TY  ++ G C  G++  +  +   M ++G  P+   YT LI+G   +   +EAF
Sbjct: 444 LVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAF 503

Query: 471 RFHDEMLQRGFVPDDAF 487
           +F+D ML  G  PDD  
Sbjct: 504 QFYDNMLAAGLTPDDTL 520



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 50/107 (46%)

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           +S + +++GF +   MD A  L+ +M   G+  +   YN +L  + RQ        +L  
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           M   G+ P   TYT L++G  +  ++ +     DE+ ++    D  F
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYF 240


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 232/427 (54%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C    I+ A      M  K   P  V ++ L++A  R         L   +    ++  V
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
           F +N LIN   +  R D A  VL +++++G  PD  T+++L+   C ++  + A E F E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M   G  P++ +++T+I  F + G+   A+   ++M  AG  PD V+Y  II+G C++  
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V EAL +  E+  KG   DV TY+ +++GLC +    EA  LFNEM+   + PD  TF  
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L+   CK+G +++A  +  IM +K ++P+  TYN+L++G+C   ++ +A  ++  MI++ 
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             PN +SY ILINGYC    + EA  L+ EM  +G+ P   + NT+I G C++G   +A 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E    M ++G  PD ++   L++   +   +D A  L   M++  L P+++TY++++   
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479

Query: 426 CRQGRMH 432
            + G+++
Sbjct: 480 YKSGKIY 486



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 221/414 (53%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +E+A    N M  K   P +  ++ L++ L +         +   +  + +  D   +N 
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+    R + +  A  +  ++ + G  PD V+FS+LI       +  RA+ +F EM ++G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+   Y  II G+C+ G    A+ +  +M + G   D+V YNTI++GLC+ ++++EA 
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           D+F+E+  +GV PD +T++ L+HG C      +A  LF+ M   +I PD+VT+N L+D  
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK G + +A  +   MI + + PNY +Y  L+NGYC    V EA  ++  M+ KG  P +
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNV 364

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           VS N +I GYC++    +A E   +M   G+ P++ +YNTLI+G  +     +A  L   
Sbjct: 365 VSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKD 424

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           M+ QG  PD++T  ++L   C+ G + ++  +   M +  L P+  TY  LI  
Sbjct: 425 MQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 204/359 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   +  ++D A   L ++ + G  PD VT+++LIN  C E     A +  + M   G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + TYN++I G CK G+   A  +L +M + G  PD   YNT++   C+   +SEA 
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF E+  +GV PD+ ++S L+     + Q + A   F EM S  ++PD V + I+++  
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA  +   M+EKG   +  TYN+++NG C    + EA  +F+ M+ +G  P+ 
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNV 364

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LI+G+CK   +++A  LFD M+ + + P+   YNTLI G C+ G   +A +L+ D
Sbjct: 365 VSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKD 424

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           M ++  SP+ ++  IL++  C +G++  A RL+  M    +KP LV+ + +I+   +SG
Sbjct: 425 MQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 113/326 (34%), Positives = 175/326 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + K   A  F  EM   G  P+  TYNT+I  +C+ G    A  L+  M   G
Sbjct: 160 LINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAG 219

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P +  YN++I+GLCK      A ++  E+   G+ PD  TY+ L+   C  +   EA 
Sbjct: 220 GRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEAS 279

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM    + PD+V+F+ L+    + G L  A    + M   G+ P+   Y  ++NGY
Sbjct: 280 ALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGY 339

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C    V EA  + D M+ KGC+ +VV+YN ++NG C+A+ + EA +LF+EM  RG+ P+ 
Sbjct: 340 CLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNT 399

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + + TLI G C+ G   +A  LF  M  +   PD+VT   L+D  CK+G ++ A +L+  
Sbjct: 400 FNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRA 459

Query: 301 MISRKISPNYISYGILINGYCSMGHV 326
           M    + PN ++Y ILI      G +
Sbjct: 460 MQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 191/354 (53%)

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +  D+  F+ LI  FSR  ++D A     ++   G  PD V ++ +ING C       A+
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           +  DEM+  G   ++ TYNTI+ G C+    T A  L  +M + G  PD   + T+I G 
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           CKD  +++AL++F  +  K ++PD+ TY+ L+ G C   + E+A+ L+ +M+S  I P+ 
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +++ IL++  C  G ++EA  +   M+ KG++P   + N+++ GYC      +A      
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDA 354

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M+++G  P+ +SYN LING+ + + +D+A  L  +M  +GL+P+   YN +++G C+ GR
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGR 414

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++  +   M  +G +PD  T T L++       L  A R    M      P+
Sbjct: 415 HCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPN 468



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 196/376 (52%)

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
           + C   N+ +A   F  M  +   P IV F  L+    R       L   + ++   +  
Sbjct: 58  KGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIER 117

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           D   + I+IN + R   V  A  +  ++++ G   D VT+++++NGLC       A + F
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFF 177

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
           +EM+  G  P+ +T+ T+I G CK G    A+ L   M +   +PDIV YNT+IDG CK 
Sbjct: 178 DEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKD 237

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
             + +A  +++++  + + P+  +Y IL++G C+     EA  L+ EM+   I P +V+ 
Sbjct: 238 RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTF 297

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           N ++   C+ G  S+A   +  M+ +GV+P+  +YN+L+NG+  +  + +A  +   M  
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           +G +P+V++YN+++ G+C+  R+ ++  +   M  +GL P+   Y TLI+G        E
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417

Query: 469 AFRFHDEMLQRGFVPD 484
           A     +M  +G  PD
Sbjct: 418 ARELFKDMQAQGCSPD 433



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 157/332 (47%), Gaps = 45/332 (13%)

Query: 198 EKG--CVMDVVTYNTILNGLCRAKM-----LTEADDL---FNEMLERGVFPDFYTFTTLI 247
           EKG  C +   T +   +G  R K      LT  +D    FN M+ +   P    F  L+
Sbjct: 32  EKGMICCLHTSTISRSRSGSGRQKYQKGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLL 91

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
               +  +    L+L   +    I+ D+  +N LI+ F ++  ++ A  +   +I     
Sbjct: 92  SALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFE 151

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ +++  LING C       A   + EMV  G +P L + NTIIKG+C+ G  + A   
Sbjct: 152 PDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGL 211

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG--- 424
           L KM   G  PD + YNT+I+G  ++  + +A  + S+++ +G+ PDV TY++++ G   
Sbjct: 212 LKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCN 271

Query: 425 --------------------------------FCRQGRMHDSELILWRMIEKGLNPDRST 452
                                            C++G + +++ I+  MIEKG+ P+ +T
Sbjct: 272 SDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYAT 331

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y +L+NG+  QN + EA    D M+ +G +P+
Sbjct: 332 YNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 86/153 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C  +K+  A+M    M  KG  P+ V+YN LIN YC+   ++EA +L + MS +G
Sbjct: 335 LMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG 394

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  F YN+LI+GLC+ GR   A+E+  +M   G SPD  T   LL   C+   +  A 
Sbjct: 395 LIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNAL 454

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            +F  M    + P++V++  LI    ++G++ R
Sbjct: 455 RLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 244/462 (52%), Gaps = 1/462 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           GV P   TY+ L+ A+ +   +E    L+  M   G+KP V++Y   I  L +  R D A
Sbjct: 225 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 284

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             +L +M   G  PD  T+  L+   C    +S+A+++F +M +    PD V++ TL+  
Sbjct: 285 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 344

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F  NG     +  +  MK+ G   + V YT +I+  C+ G V EAL+M DEM +KG V +
Sbjct: 345 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 404

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             +YN++++G  +A    +A +LF  M   G  P+ YT    I+ + K G   KA+  ++
Sbjct: 405 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 464

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M  K I PD+V  N ++ G  K G +  A +++ ++ +  +SP+ I+Y ++I       
Sbjct: 465 LMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKAS 524

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
              EA +++Y+M+     P +++ N++I    ++G   +A     ++    ++P   +YN
Sbjct: 525 KFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYN 584

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TL+ G  RE  + +   L+ +M +    P++ITYN IL   C+ G ++D+  +L+ M  K
Sbjct: 585 TLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 644

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G  PD S+Y T+I G V +    EAF    +M ++  +PD A
Sbjct: 645 GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYA 685



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 253/520 (48%), Gaps = 37/520 (7%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           A  K   +++    L EME  GV P+  +Y   I    +    +EA++++  M  +G KP
Sbjct: 239 AFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKP 298

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES------------- 110
            V T+  LI  LC  GR   AK+V  +M +    PD  TY TLL +              
Sbjct: 299 DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW 358

Query: 111 ----------------------CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
                                 C+   + EA E+F EM ++G+ P+  S+++LI  F + 
Sbjct: 359 NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 418

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
            +   AL  F+ M   G  P+   + + IN Y ++G  ++A++  + M  KG V DVV  
Sbjct: 419 DRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAG 478

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N +L GL ++  L  A  +F+E+   GV PD  T+T +I    K    ++A+ +F  M +
Sbjct: 479 NAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 538

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
            +  PD++  N+LID   K G  ++A +++  +    + P   +Y  L+ G    G V E
Sbjct: 539 NNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKE 598

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
              L  EM      P L++ NTI+   C++G  + A + L  M ++G  PD  SYNT+I 
Sbjct: 599 VMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIY 658

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS-ELILWRMIEKGLN 447
           G V+EE  ++AF++  +M+ + L+PD  T   IL  F + G M ++  +I    ++ G  
Sbjct: 659 GLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSK 717

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            DRS+  +L+ G + +  ++++  F + +   G   DD F
Sbjct: 718 TDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFF 757



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 151/591 (25%), Positives = 252/591 (42%), Gaps = 109/591 (18%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLI----------------------- 37
           +++ALC+  ++  A     EM+QKG+ P+  +YN+LI                       
Sbjct: 376 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 435

Query: 38  ------------NAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                       N Y + G   +A Q    M  KG+ P V   N+++ GL K GR   AK
Sbjct: 436 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 495

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKEN-MSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            V  E+  MG+SPDT TY T++++ C K +   EA +IF +M      PD+++ ++LI  
Sbjct: 496 RVFHELKAMGVSPDTITY-TMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDT 554

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDN---------------------------------- 170
             + G+ D A   F ++K   L P +                                  
Sbjct: 555 LYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPN 614

Query: 171 -VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
            + Y  I++  C+NG V +AL M   M  KGC+ D+ +YNT++ GL + +   EA  +F 
Sbjct: 615 LITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFC 674

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKV 288
           +M ++ + PD+ T  T++    K G M +AL++  D   Q   K D  + ++L++G  K 
Sbjct: 675 QM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKK 733

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
             +EK+ +    + S  I+ +      LI   C      EA  L  +    G+       
Sbjct: 734 AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 793

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDS---------------------------- 380
           N++I G         A+   ++M   G  PD                             
Sbjct: 794 NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 853

Query: 381 -------ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
                  ++YNT+I+G V+   +++A  L   + +QG  P   TY  +L G  + GR+ D
Sbjct: 854 KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 913

Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +E +   M+E G   + + Y  L+NGH    N ++      +M+ +G  PD
Sbjct: 914 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 964



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 219/484 (45%), Gaps = 38/484 (7%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           L+  + R G + E F +M     + +K  V T+ ++  GL  +G    A   L  M + G
Sbjct: 134 LMRGHGRVGDMAEVFDVMQR---QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 190

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           +  +  TYN L+    +     EA E++  M   GV P + ++S L+  F +   ++  L
Sbjct: 191 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 250

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
              REM++ G+ P+   YTI I    +     EA ++  +M  +GC  DV+T+  ++  L
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 310

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTL----------------------------- 246
           C A  +++A D+F +M +    PD  T+ TL                             
Sbjct: 311 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 370

Query: 247 ------IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                 I   C+ G + +AL +FD M QK I P+  +YN+LI GF K      A +L+  
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 430

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  ++ + IN Y   G   +A + +  M  KGI P +V+ N ++ G  +SG 
Sbjct: 431 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 490

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     ++ + GV PD+I+Y  +I    +    D+A  +   M     VPDV+  N 
Sbjct: 491 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 550

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  ++  I +++ E  L P   TY TL+ G   +  +KE     +EM    
Sbjct: 551 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 610

Query: 481 FVPD 484
           + P+
Sbjct: 611 YPPN 614



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 218/459 (47%), Gaps = 2/459 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+    K  K D A     +M +    PD +  N+LI+   + G  +EA+++   +    
Sbjct: 516 MIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 575

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P   TYN+L+ GL ++G+      +L+EM      P+  TYNT+L   C+   +++A 
Sbjct: 576 LEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDAL 635

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M+ +G  PD+ S++T+I    +  + + A   F +MK   L+PD      I+  +
Sbjct: 636 DMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSF 694

Query: 181 CRNGFVLEALKM-RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            + G + EAL + +D  L+ G   D  + ++++ G+ +   + ++ +    +   G+  D
Sbjct: 695 VKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLD 754

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +    LI   CK     +A  L        +      YN+LI G      ++ A  L+A
Sbjct: 755 DFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFA 814

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M      P+  +Y +L++       + E  ++  EM  KG + T V+ NTII G  +S 
Sbjct: 815 EMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSR 874

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A +    ++S+G  P   +Y  L++G ++   ++ A  L ++M   G   +   YN
Sbjct: 875 RLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 934

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++L G    G       +   M+++G+NPD  +YT +I+
Sbjct: 935 ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 188/442 (42%), Gaps = 39/442 (8%)

Query: 82  DRAKEVLDEMLQMGLSP----DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           D   E L+        P     TA+ N +L        + +  E+F  M R+ V  ++ +
Sbjct: 103 DGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGT 162

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           F+ + G     G L  A +    MK AG+V +   Y  ++    ++GF  EAL++   M+
Sbjct: 163 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 222

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G V  V TY+ ++    + + +     L  EM   GV P+ Y++T  I    +    +
Sbjct: 223 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFD 282

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           +A  +   M  +  KPD++T+  LI   C  G +  A  ++  M      P+ ++Y  L+
Sbjct: 283 EAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL 342

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           + +   G       +W  M   G    +V+   +I   C+ G   +A E   +M  +G+ 
Sbjct: 343 DKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIV 402

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKME------------------------------ 407
           P+  SYN+LI+GF++ +    A  L   M+                              
Sbjct: 403 PEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQR 462

Query: 408 -----NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
                ++G+VPDV+  N +L G  + GR+  ++ +   +   G++PD  TYT +I     
Sbjct: 463 YELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSK 522

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
            +   EA +   +M++   VPD
Sbjct: 523 ASKFDEAVKIFYDMIENNCVPD 544


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 238/449 (53%), Gaps = 1/449 (0%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           ++ ++   G L+EA  ++  M   GL       N +I+     G  D A++V DEML   
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           + PD+ +Y  ++V  CR   +S+ +    +M  RG A D  + + +I  FS  G ++RA 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            YF++    GL P+ + ++ +ING C+ G + +A +M +EM+ KG   +V T+  +++GL
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 216 CRAKMLTEADDLFNEMLERGVF-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           C+     +A  LF +++    + P+ YT+T +I+G+CK+  +N+A  L   M ++ + P+
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
             TY  LIDG CK G   +A +L   M     +PN  +Y  +I+G C  G   EA++L  
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
             +  G+    V+   +I  +CR  D  +A    S+M   G+ PD  +YN LI  F R++
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            ++++  L  +    GL+P   TY  ++ G+CR G +  +     +M + G  PD  TY 
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYG 583

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            LI+G  +++ L EA + ++ M+  G  P
Sbjct: 584 ALISGLCNESKLDEACQLYETMIDNGLSP 612



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 240/470 (51%), Gaps = 4/470 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A+    EM  + V PD+ +Y  ++  YCR G + +  + +  M  +G      T   
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +I+   +KG  +RA     + +QMGL+P+   +++L+   C+  ++ +A E+  EM R+G
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
             P++ + + LI    + G  ++A  ++ + ++S    P+   YT +INGYC+   +  A
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRA 388

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             +   M E+G V +  TY  +++G C+A     A +L + M + G  P+ +T+  +I G
Sbjct: 389 EMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDG 448

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK G   +A  L     +  +  D VTY  LI  FC+  + ++A  +++ M    + P+
Sbjct: 449 LCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPD 508

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y +LI  +C    V E+ +L+ E VG G+ PT  +  ++I GYCR G  S A +F  
Sbjct: 509 MHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFH 568

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           KM   G  PDSI+Y  LI+G   E  +D+A  L   M + GL P  +T   +   +C+QG
Sbjct: 569 KMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQG 628

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
               + +IL R+ EK L     T  TLI    S+  +  A  F  ++L +
Sbjct: 629 DSATAMIILERL-EKKLWI--RTVNTLIRKLCSEKKVGVAALFFHKLLDK 675



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 218/416 (52%), Gaps = 1/416 (0%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           ++    + G+   A  ++ EM   GL       N ++  +     +  AE++F EM  R 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           V PD  S+  ++  + R G++     + ++M   G   DN   T++I+ +   GFV  A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
               + ++ G   +++ +++++NGLC+   + +A ++  EM+ +G  P+ YT T LI G 
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 251 CKDGNMNKALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           CK G   KA  LF  ++   + KP++ TY  +I+G+CK  ++ +A  L   M  + + PN
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             +Y  LI+G+C  G+   A+ L   M  +G  P + + N II G C+ G   +A + L 
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           + +  G+  D ++Y  LI+ F R+ +  +A A+ S+M   GL PD+ TYNV++  FCRQ 
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++ +SE +    +  GL P + TYT++I G+    ++  A +F  +M   G  PD 
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDS 579



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 211/410 (51%), Gaps = 8/410 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++N LCK   I  A   L EM +KG  P+  T+  LI+  C++G+ E+AF+L +  +   
Sbjct: 304 LINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD 363

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             KP V+TY  +ING CK+ + +RA+ +L  M + GL P+T TY  L+   C+  N   A
Sbjct: 364 NYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRA 423

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M + G  P+I +++ +I    + G+   A    R    +GL  D V YTI+I+ 
Sbjct: 424 YELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISE 483

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR     +AL +   M + G   D+ TYN ++   CR K + E++ LF E +  G+ P 
Sbjct: 484 FCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPT 543

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T++I G+C+DG+++ A+  F  M     KPD +TY  LI G C   ++++A +L+ 
Sbjct: 544 KETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYE 603

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            MI   +SP  ++   L   YC  G    A  +  E + K  K  + + NT+I+  C   
Sbjct: 604 TMIDNGLSPCEVTRVTLAYEYCKQGDSATAM-IILERLEK--KLWIRTVNTLIRKLCSEK 660

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
               A  F  K++ + ++ D I+    +  F         FALVS +  +
Sbjct: 661 KVGVAALFFHKLLDKDLNVDRIT----LAAFTTACYESNKFALVSDLSER 706


>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 250/472 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  +   A   L EME  G  P  VTYN+LI+AY R+G L+EA +L + M  KG
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKG 391

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP VFTY +L++G  K G+ D A +V +EM   G  P+  T+N L+     + N  E  
Sbjct: 392 IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMM 451

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F E+      PDIV+++TL+ +F +NG        F+EMK AG VP+   +  +I+ Y
Sbjct: 452 KVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAY 511

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R GF  +A+ +   ML+ G   D+ TYN +L  L R  +  +++ +  EM +    P+ 
Sbjct: 512 SRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNE 571

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+H +     + +   L + +    I+P  V   TL+  + K   + +  + + +
Sbjct: 572 LTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLE 631

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +  SP+  +   +++ Y     V++   +   +   G  P+L + N+++  Y R+  
Sbjct: 632 LREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEH 691

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K+++ L +++++G+ PD IS+NT+I  + R   M +A  + ++M++ GL PDVITYN 
Sbjct: 692 FEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNT 751

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            +  +       ++  ++  MI+    P+++TY +LI+     N   EA  F
Sbjct: 752 FIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSF 803



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 245/485 (50%), Gaps = 37/485 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFL-EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           M+  GV PD  TYNTLI++ CR G L EEA ++   M   G  P   TYN+L++   K  
Sbjct: 282 MKSSGVAPDLYTYNTLISS-CRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSR 340

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A EVL EM   G +P   TYN+L+    R   + EA E+  +M ++G+ PD+ +++
Sbjct: 341 RPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYT 400

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  F + G+ D A+  F EM+ AG  P+   +  +I  +   G  +E +K+ +E+   
Sbjct: 401 TLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKIC 460

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
            CV D+VT+NT+L    +  M +E   +F EM   G  P+  TF TLI  + + G  ++A
Sbjct: 461 ECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQA 520

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + ++  M    + PD+ TYN ++    + G  E++ K+ A+M   +  PN ++Y  L++ 
Sbjct: 521 MAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA 580

Query: 320 YCSMGHV-----------------------------------TEAFRLWYEMVGKGIKPT 344
           Y +   V                                   TE  R + E+  +G  P 
Sbjct: 581 YANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPD 640

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + + N ++  Y R    SK +E L+ +   G  P   +YN+L+  + R E+ +K+  ++ 
Sbjct: 641 ITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILR 700

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++  +G+ PD+I++N ++  +CR GRM ++  I   M + GL PD  TY T I  + S +
Sbjct: 701 EIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDS 760

Query: 465 NLKEA 469
              EA
Sbjct: 761 MFIEA 765



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 254/556 (45%), Gaps = 73/556 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K+ +   A   L ++   GV+ D   Y +LI AY   G   EA  +   +  +G
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250

Query: 61  LKPGVFTYNSLINGLCKKG-RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-SE 118
            +P + TYN ++N   K G    +   ++D M   G++PD  TYNTL + SCR+ ++  E
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTL-ISSCRRGSLYEE 309

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A E+F EM   G +PD V+++ L+ ++ ++ +   A+   +EM+++G  P  V Y  +I+
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            Y R+G + EA++++ +M++KG   DV TY T+L+G  +      A  +F EM   G  P
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF  LI  H   GN  + + +F+ +      PDIVT+NTL+  F + G   + + ++
Sbjct: 430 NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVF 489

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M      P   ++  LI+ Y   G   +A  ++  M+  G+ P L + N ++    R 
Sbjct: 490 KEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARG 549

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS-------------- 404
           G   ++++ L++M      P+ ++Y +L++ +   + +++  AL                
Sbjct: 550 GLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLL 609

Query: 405 ---------------------KMENQGLVPDVIT-------------------------- 417
                                ++  QG  PD+ T                          
Sbjct: 610 KTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKD 669

Query: 418 ---------YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
                    YN ++  + R      SE IL  +I KG+ PD  ++ T+I  +     +KE
Sbjct: 670 SGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKE 729

Query: 469 AFRFHDEMLQRGFVPD 484
           A R   EM   G  PD
Sbjct: 730 ASRIFAEMKDFGLAPD 745



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 172/348 (49%), Gaps = 3/348 (0%)

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + +I +  + G+   A     ++++ G+  D   YT +I  Y  NG   EA+ +  ++ E
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248

Query: 199 KGCVMDVVTYNTILNGLCRAKM-LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM- 256
           +GC   ++TYN ILN   +  M  ++   L + M   GV PD YT+ TLI   C+ G++ 
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLI-SSCRRGSLY 307

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            +A  +F+ M      PD VTYN L+D + K     +A ++  +M +   +P+ ++Y  L
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+ Y   G + EA  L  +MV KGIKP + +  T++ G+ ++G    A +   +M   G 
Sbjct: 368 ISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGC 427

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+  ++N LI       N  +   +  +++    VPD++T+N +L  F + G   +   
Sbjct: 428 QPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSG 487

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   M   G  P+R T+ TLI+ +       +A   +  ML  G  PD
Sbjct: 488 VFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPD 535



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 157/325 (48%), Gaps = 37/325 (11%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM++ G  P+  T+NTLI+AY R GF ++A  +   M   G+ P + TYN+++  L + G
Sbjct: 491 EMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG 550

Query: 80  RCDRAKEVLDEMLQMGLSPDTATY-----------------------------------N 104
             +++++VL EM      P+  TY                                    
Sbjct: 551 LWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLK 610

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
           TL++   + + ++E E  F E+  +G +PDI + + ++ I+ R   + +       +K +
Sbjct: 611 TLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDS 670

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  P    Y  ++  Y R     ++  +  E++ KG   D++++NT++   CR   + EA
Sbjct: 671 GFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEA 730

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             +F EM + G+ PD  T+ T I  +  D    +A+++   M +   KP+  TYN+LID 
Sbjct: 731 SRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDW 790

Query: 285 FCKVGEMEKANKLWADMISRKISPN 309
           FCK+   ++AN   +++  R + P+
Sbjct: 791 FCKLNRRDEANSFISNL--RNLDPS 813


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 244/462 (52%), Gaps = 1/462 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           GV P   TY+ L+ A+ +   +E    L+  M   G+KP V++Y   I  L +  R D A
Sbjct: 190 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 249

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             +L +M   G  PD  T+  L+   C    +S+A+++F +M +    PD V++ TL+  
Sbjct: 250 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 309

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F  NG     +  +  MK+ G   + V YT +I+  C+ G V EAL+M DEM +KG V +
Sbjct: 310 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 369

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             +YN++++G  +A    +A +LF  M   G  P+ YT    I+ + K G   KA+  ++
Sbjct: 370 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 429

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M  K I PD+V  N ++ G  K G +  A +++ ++ +  +SP+ I+Y ++I       
Sbjct: 430 LMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKAS 489

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
              EA +++Y+M+     P +++ N++I    ++G   +A     ++    ++P   +YN
Sbjct: 490 KFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYN 549

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TL+ G  RE  + +   L+ +M +    P++ITYN IL   C+ G ++D+  +L+ M  K
Sbjct: 550 TLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 609

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G  PD S+Y T+I G V +    EAF    +M ++  +PD A
Sbjct: 610 GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYA 650



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 253/520 (48%), Gaps = 37/520 (7%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           A  K   +++    L EME  GV P+  +Y   I    +    +EA++++  M  +G KP
Sbjct: 204 AFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKP 263

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVE-------------- 109
            V T+  LI  LC  GR   AK+V  +M +    PD  TY TLL +              
Sbjct: 264 DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW 323

Query: 110 ---------------------SCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
                                 C+   + EA E+F EM ++G+ P+  S+++LI  F + 
Sbjct: 324 NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 383

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
            +   AL  F+ M   G  P+   + + IN Y ++G  ++A++  + M  KG V DVV  
Sbjct: 384 DRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAG 443

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N +L GL ++  L  A  +F+E+   GV PD  T+T +I    K    ++A+ +F  M +
Sbjct: 444 NAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 503

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
            +  PD++  N+LID   K G  ++A +++  +    + P   +Y  L+ G    G V E
Sbjct: 504 NNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKE 563

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
              L  EM      P L++ NTI+   C++G  + A + L  M ++G  PD  SYNT+I 
Sbjct: 564 VMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIY 623

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS-ELILWRMIEKGLN 447
           G V+EE  ++AF++  +M+ + L+PD  T   IL  F + G M ++  +I    ++ G  
Sbjct: 624 GLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSK 682

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            DRS+  +L+ G + +  ++++  F + +   G   DD F
Sbjct: 683 TDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFF 722



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/558 (24%), Positives = 259/558 (46%), Gaps = 74/558 (13%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ L K  + D A     ++++  + P   TYNTL+    REG ++E   L+  M    
Sbjct: 516  LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 575

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P + TYN++++ LCK G  + A ++L  M   G  PD ++YNT++    ++E  +EA 
Sbjct: 576  YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAF 635

Query: 121  EIFCEMSRRGVAPDIVSFSTLI-------------------------------------G 143
             IFC+M ++ + PD  +  T++                                     G
Sbjct: 636  SIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEG 694

Query: 144  IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            I  + G +++++ +   + S+G+  D+     +I   C+    LEA ++  +    G  +
Sbjct: 695  ILKKAG-IEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSL 753

Query: 204  DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD------------------------ 239
                YN+++ GL    ++  A+ LF EM E G  PD                        
Sbjct: 754  KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 813

Query: 240  -----------FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
                       + T+ T+I G  K   + +A++L+  +  +   P   TY  L+DG  K 
Sbjct: 814  EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 873

Query: 289  GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            G +E A  L+ +M+      N   Y IL+NG+   G+  +   L+ +MV +GI P + S 
Sbjct: 874  GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 933

Query: 349  NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
              II   C++G  +    +  +++  G++PD I+YN LI+G  + + +++A +L ++M+ 
Sbjct: 934  TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQK 993

Query: 409  QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            +G+VP++ TYN ++    + G+  ++  +   ++ KG  P+  TY  LI G+    +   
Sbjct: 994  KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDS 1053

Query: 469  AFRFHDEMLQRGFVPDDA 486
            A+  +  M+  G +P+ +
Sbjct: 1054 AYAAYGRMIVGGCLPNSS 1071



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 234/462 (50%), Gaps = 8/462 (1%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  L K+ + + A    C+M +K + PD  T  T++ ++ + G ++EA  ++       
Sbjct: 621  VIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYF--- 676

Query: 61   LKPGVFT----YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            L+PG  T     +SL+ G+ KK   +++ E  + +   G++ D      L+   C+++  
Sbjct: 677  LQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKA 736

Query: 117  SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             EA E+  +    GV+     +++LI        +D A   F EMK  G  PD   Y ++
Sbjct: 737  LEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLL 796

Query: 177  INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
            ++   ++  + E LK+++EM  KG     VTYNTI++GL +++ L +A DL+  ++ +G 
Sbjct: 797  LDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGF 856

Query: 237  FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
             P   T+  L+ G  K G +  A NLF+ M +   K +   YN L++G    G  EK   
Sbjct: 857  SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 916

Query: 297  LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
            L+ DM+ + I+P+  SY I+I+  C  G + +    + +++  G++P L++ N +I G  
Sbjct: 917  LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLG 976

Query: 357  RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
            +S    +A    ++M  +G+ P+  +YN+LI    +     +A  +  ++  +G  P+V 
Sbjct: 977  KSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVF 1036

Query: 417  TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
            TYN ++ G+   G    +     RMI  G  P+ STY  L N
Sbjct: 1037 TYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPN 1078



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 219/484 (45%), Gaps = 38/484 (7%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           L+  + R G + E F +M     + +K  V T+ ++  GL  +G    A   L  M + G
Sbjct: 99  LMRGHGRVGDMAEVFDVMQR---QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 155

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           +  +  TYN L+    +     EA E++  M   GV P + ++S L+  F +   ++  L
Sbjct: 156 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 215

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
              REM++ G+ P+   YTI I    +     EA ++  +M  +GC  DV+T+  ++  L
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTL----------------------------- 246
           C A  +++A D+F +M +    PD  T+ TL                             
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335

Query: 247 ------IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                 I   C+ G + +AL +FD M QK I P+  +YN+LI GF K      A +L+  
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 395

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  ++ + IN Y   G   +A + +  M  KGI P +V+ N ++ G  +SG 
Sbjct: 396 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 455

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     ++ + GV PD+I+Y  +I    +    D+A  +   M     VPDV+  N 
Sbjct: 456 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 515

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  ++  I +++ E  L P   TY TL+ G   +  +KE     +EM    
Sbjct: 516 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 575

Query: 481 FVPD 484
           + P+
Sbjct: 576 YPPN 579



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 188/443 (42%), Gaps = 39/443 (8%)

Query: 81  CDRAKEVLDEMLQMGLSP----DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
            D   E L+        P     TA+ N +L        + +  E+F  M R+ V  ++ 
Sbjct: 67  ADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVG 126

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +F+ + G     G L  A +    MK AG+V +   Y  ++    ++GF  EAL++   M
Sbjct: 127 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 186

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           +  G V  V TY+ ++    + + +     L  EM   GV P+ Y++T  I    +    
Sbjct: 187 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 246

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A  +   M  +  KPD++T+  LI   C  G +  A  ++  M      P+ ++Y  L
Sbjct: 247 DEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 306

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ++ +   G       +W  M   G    +V+   +I   C+ G   +A E   +M  +G+
Sbjct: 307 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 366

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKME----------------------------- 407
            P+  SYN+LI+GF++ +    A  L   M+                             
Sbjct: 367 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 426

Query: 408 ------NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
                 ++G+VPDV+  N +L G  + GR+  ++ +   +   G++PD  TYT +I    
Sbjct: 427 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 486

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
             +   EA +   +M++   VPD
Sbjct: 487 KASKFDEAVKIFYDMIENNCVPD 509



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 108/215 (50%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ L K  +I+ A+    EM + G   +   YN L+N +   G  E+   L   M  +G
Sbjct: 866  LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 925

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            + P + +Y  +I+ LCK G+ +       ++L+MGL PD  TYN L+    + + + EA 
Sbjct: 926  INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAV 985

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             +F EM ++G+ P++ ++++LI    + G+   A   + E+ + G  P+   Y  +I GY
Sbjct: 986  SLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1045

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
              +G    A      M+  GC+ +  TY  + N L
Sbjct: 1046 SVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 261/518 (50%), Gaps = 48/518 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K++  +     L E++   +   +  ++ LI AY   G  E+A +  + M    
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP +F +N +++ L +K     A  V ++ML+  L+PD  TY  L+   C+     +A 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+ RG+ P+ + +S ++    +  ++  A   F +M+++G   D + Y +++NG+
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGF 278

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G++ +A  +   + + G ++ V+ Y  ++NGL RA+   EA   + +ML   + PD 
Sbjct: 279 CKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDV 338

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I G  ++G + +AL L   MT++ ++PD + YN LI GFC +G +++A  L  +
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLE 398

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR--- 357
           +      PN  +Y ILI G C  G + +A  ++ EM   G  P++V+ N++I G C+   
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458

Query: 358 ---------------------------------------------SGDASKADEFLSKMV 372
                                                        SG   KA + L ++V
Sbjct: 459 LEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLV 518

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
             GV PD  +YN LINGF +  N++ AF L  +M+ +G +PD +TY  ++ G  R GR  
Sbjct: 519 DSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNE 578

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           D+  I  +M++KG  P+ STY T++     +NN+  A 
Sbjct: 579 DALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 217/458 (47%), Gaps = 53/458 (11%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  KI  A+    +M   G   D +TYN L+N +C+ G+L++AF L+  ++  G
Sbjct: 239 VLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDG 298

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              GV  Y  LINGL +  R + A     +ML+  + PD   Y  ++    ++  ++EA 
Sbjct: 299 HILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEAL 358

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+ RG+ PD + ++ LI  F   G LD A     E+      P+N  Y+I+I G 
Sbjct: 359 TLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGM 418

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM--------- 231
           C+NG + +A  +  EM + GC+  VVT+N+++NGLC+A  L EA  LF +M         
Sbjct: 419 CKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLF 478

Query: 232 -------------------LER--------------------GVFPDFYTFTTLIHGHCK 252
                              +ER                    GV PD  T+  LI+G CK
Sbjct: 479 LRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCK 538

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            GN+N A  LF  M  K   PD VTY TLIDG  + G  E A +++  M+ +   P   +
Sbjct: 539 FGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESST 598

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVG--KGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           Y  ++   C   +++ A  +W + +   +G +   V    ++     + +   A   L +
Sbjct: 599 YKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVR---VVAESFDNEELQTAIRRLLE 655

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           M  +  + D   Y   + G V+ +   +AFA+ S +++
Sbjct: 656 MDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKD 693



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 117/244 (47%), Gaps = 19/244 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LC+   I  A   L ++   GV PD  TYN LIN +C+ G +  AF+L   M  KG
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY +LI+GL + GR + A E+ ++M++ G  P+++TY T++  SCR+ N+S A 
Sbjct: 557 HMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616

Query: 121 EIFCEMSR--RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
            ++ +  R  RG   + V    ++     N +L  A+    EM       D   YTI + 
Sbjct: 617 SVWMKYLRDFRGWEDEKVR---VVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLI 673

Query: 179 GY------CRNGFVLEALK-MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
           G       C    +   LK  +  +    CVM       ++  LC  + L  A D+F   
Sbjct: 674 GLVQAKRDCEAFAIFSVLKDFKMNISSASCVM-------LIGRLCMVENLDMAMDVFLFT 726

Query: 232 LERG 235
           LERG
Sbjct: 727 LERG 730


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 233/438 (53%), Gaps = 4/438 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGV---YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ALC+D +++ A   L EM  +G      D V +N L++ YC+ G +E A      M  +G
Sbjct: 173 ALCRDGQVEGAAA-LAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQG 231

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   V  YN+L+ GLC+ G  D A+ +L+ M   G+ P+  TY T + E CR   + +A 
Sbjct: 232 VGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAF 291

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ EM R GV PD+V+ S L+    R G+   A   FREM+  G  P++V Y  +I+  
Sbjct: 292 SLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSL 351

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +     E+  +  E++ +G VMD+V Y ++++ L +   + E  D+F+  L     P+ 
Sbjct: 352 WKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNG 411

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI   C+ GN++ A  +   M  KS+ P++VT++++I+G  K G + KA      
Sbjct: 412 VTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRK 471

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I PN ++YG +++G+        A  L++EM+ +G++      + ++ G  ++G 
Sbjct: 472 MKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGK 531

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A+     M   G+  D ++Y TLI+G  +  NM  AF +  ++  + L PD + YNV
Sbjct: 532 MEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNV 591

Query: 421 ILTGFCRQGRMHDSELIL 438
            +   C  G+  ++E IL
Sbjct: 592 FVNCLCMLGKSKEAESIL 609



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 240/462 (51%), Gaps = 9/462 (1%)

Query: 29  DTVTYNTLINAYC---REGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           DTV+YN +I+      R G L  A  L+  M  +G+     T N+ +  LC+ G+ + A 
Sbjct: 127 DTVSYNVVISGLTEQGRHGGLAPA--LLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAA 184

Query: 86  EVLDEMLQMGLSP---DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
             L EM+  G      D   +N LL   C+  +M  A      M  +GV  D+V ++TL+
Sbjct: 185 -ALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLV 243

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               R G+ D A      MK  G+ P+ V YT  I   CR   V +A  + +EM+  G +
Sbjct: 244 AGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVL 303

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            DVVT + +++GLCRA   +EA  LF EM + G  P+  T+ TLI    K    +++  L
Sbjct: 304 PDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGL 363

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
              +  + +  D+V Y +L+D   K G++++   ++   +S   +PN ++Y +LI+  C 
Sbjct: 364 LGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCR 423

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G+V  A ++  EM  K + P +V+ ++II G  + G   KA +++ KM   G+DP+ ++
Sbjct: 424 AGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVT 483

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           Y T+++GF + +  + A  L  +M  +G+  +    ++++ G  + G+M ++E +   M 
Sbjct: 484 YGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMN 543

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++G+  D   YTTLI+G     N+  AF+   E+ +R   PD
Sbjct: 544 KRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPD 585



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 231/458 (50%), Gaps = 2/458 (0%)

Query: 14  AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGKGL-KPGVFTYNSL 71
           A   L EM ++GV  D VT NT + A CR+G +E A  L   M  G+ + +  V  +N+L
Sbjct: 148 APALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNAL 207

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++G CK G  + A      M   G+  D   YNTL+   CR      A  +   M   GV
Sbjct: 208 LDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGV 267

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P++V+++T I    R   +D A   + EM   G++PD V  + +++G CR G   EA  
Sbjct: 268 EPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYA 327

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  EM + G   + VTY T+++ L +A+  +E+  L  E++ RGV  D   +T+L+    
Sbjct: 328 LFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLG 387

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K G +++  ++F      +  P+ VTY  LID  C+ G ++ A ++  +M  + + PN +
Sbjct: 388 KQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVV 447

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           ++  +ING    G + +A     +M  +GI P +V+  T++ G+ +  +   A +   +M
Sbjct: 448 TFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEM 507

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           + EGV+ +    + L+NG  +   M++A AL   M  +G++ D + Y  ++ G  + G M
Sbjct: 508 LCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNM 567

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
             +  +   + E+ L+PD   Y   +N        KEA
Sbjct: 568 PAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEA 605



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 200/368 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC+  + D+A+  L  M+  GV P+ VTY T I   CR   +++AF L   M   G
Sbjct: 242 LVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMG 301

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V T ++L++GLC+ GR   A  +  EM ++G +P+  TY TL+    +    SE+ 
Sbjct: 302 VLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESH 361

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  E+  RGV  D+V +++L+    + G++D     F    S    P+ V YT++I+  
Sbjct: 362 GLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDAL 421

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V  A +M  EM +K    +VVT+++I+NGL +  +L +A D   +M ERG+ P+ 
Sbjct: 422 CRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNV 481

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T++ G  K      AL+L+  M  + ++ +    + L++G  K G+ME+A  L+ D
Sbjct: 482 VTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRD 541

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  ++++Y  LI+G   MG++  AF++  E+  + + P  V  N  +   C  G 
Sbjct: 542 MNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGK 601

Query: 361 ASKADEFL 368
           + +A+  L
Sbjct: 602 SKEAESIL 609



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 204/390 (52%), Gaps = 4/390 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +++A      M  +GV  D V YNTL+   CR G  + A  ++ +M G G
Sbjct: 207 LLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDG 266

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY + I   C+    D A  + +EM++MG+ PD  T + L+   CR    SEA 
Sbjct: 267 VEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAY 326

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIF--SRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
            +F EM + G AP+ V++ TLI     +R G     L+   E+ S G+V D V+YT +++
Sbjct: 327 ALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLL--GEVVSRGVVMDLVMYTSLMD 384

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
              + G + E   M    L      + VTY  +++ LCRA  +  A+ +  EM ++ V P
Sbjct: 385 WLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHP 444

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF+++I+G  K G + KA +    M ++ I P++VTY T++DGF K  E E A  L+
Sbjct: 445 NVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLY 504

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M+   +  N     +L+NG    G + EA  L+ +M  +G+    V+  T+I G  + 
Sbjct: 505 HEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKM 564

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           G+   A +   ++    + PD++ YN  +N
Sbjct: 565 GNMPAAFKVGQELTERNLSPDAVVYNVFVN 594



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 161/372 (43%), Gaps = 73/372 (19%)

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLC-RAKMLTEADDLFNEMLERGVFPDFYTFT 244
            L +L+    +L      D V+YN +++GL  + +    A  L  EM +RGV  D  T  
Sbjct: 109 ALRSLRPALALLRASESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVN 168

Query: 245 T-------------------------------------LIHGHCKDGNMNKALNLFDIMT 267
           T                                     L+ G+CK G+M  AL     M 
Sbjct: 169 TALVALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMR 228

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            + +  D+V YNTL+ G C+ GE + A  +   M    + PN ++Y   I   C    V 
Sbjct: 229 TQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVD 288

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +AF L+ EMV  G+ P +V+ + ++ G CR+G  S+A     +M   G  P+ ++Y TLI
Sbjct: 289 DAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLI 348

Query: 388 NGFVREENMDKAFALVSKMENQGLV----------------------------------- 412
           +   +     ++  L+ ++ ++G+V                                   
Sbjct: 349 DSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHT 408

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P+ +TY V++   CR G +  +E +L  M +K ++P+  T++++ING   Q  L +A  +
Sbjct: 409 PNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADY 468

Query: 473 HDEMLQRGFVPD 484
             +M +RG  P+
Sbjct: 469 MRKMKERGIDPN 480


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/453 (32%), Positives = 234/453 (51%), Gaps = 12/453 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   + + A+  + EM +   +P+ VT+ T I A+C+ G L+ A +L+  M   G
Sbjct: 222 VLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYG 281

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  Y++L+NG  + GR D A ++L+ ML     P+T  YN  L   C      E  
Sbjct: 282 CTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVG 338

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R+   P+  +FSTLI    +N  ++ A+    +M+  G +PD V Y  II+ +
Sbjct: 339 ELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCF 398

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
                  +ALK+   ML   C  D +++N +L  LC+AK   +A +L  +ML++    + 
Sbjct: 399 SDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINE 455

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI   C++G +  A+ +F++M +    PDIVTY++LI+GF + G  E A  L+  
Sbjct: 456 MTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRS 515

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R    +  SY   + G C      +A  L  +MV +   P  V+ N +I   C+ G 
Sbjct: 516 MPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGL 572

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A +   +M   G+ PD  +YN LING+  +  +D A   +S M  +   PD I+YN 
Sbjct: 573 VNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNS 629

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
           IL G CR  R  D+E ++  M+ K   P+  T+
Sbjct: 630 ILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 250/485 (51%), Gaps = 16/485 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   ++  A+  L  ++  G   D V++NTL+  YCR+G L +A +++ +    G
Sbjct: 122 LIKKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRDGSLGDAERVVEAARASG 180

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V TY +LI+G C+ GR     + L  +  M ++PDT TYNT+L   C  +   +AE
Sbjct: 181 TA-NVVTYTALIDGYCRSGR---LADALRLIASMPVAPDTYTYNTVLKGLCCAKQWEQAE 236

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM R    P+ V+F+T I  F +NG LDRA+    +M   G  PD ++Y+ ++NG+
Sbjct: 237 ELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGF 296

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G V EALK+ + ML   C  + V YN  L GLC A    E  +L  EM+ +   P+ 
Sbjct: 297 SEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPND 353

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+TLI+  C++  +  A+ + + M +    PD+V+YNT+I  F      + A KL   
Sbjct: 354 ATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKS 413

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ +   P+ IS+  ++   C      +A  L  +M+ K  +   ++ N +I   C++G 
Sbjct: 414 MLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQ 470

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK-AFALVSKMENQGLVPDVITYN 419
              A E    M      PD ++Y++LINGF  E+ +D+ AF L   M  +    D+ +YN
Sbjct: 471 VKDAIEVFELMPKYRCMPDIVTYSSLINGF-SEQGLDEMAFDLFRSMPCRA---DIFSYN 526

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
             L G C   R  D+  ++  M+ +   P+  T+  LI+    +  +  A   +++M + 
Sbjct: 527 ATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKY 586

Query: 480 GFVPD 484
           G  PD
Sbjct: 587 GITPD 591



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 214/423 (50%), Gaps = 41/423 (9%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A C++  +D A   L +M + G  PD + Y+TL+N +   G ++EA +L+N+M     
Sbjct: 258 IRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---C 314

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P    YN+ + GLC  GR +   E++ EM++    P+ AT++TL+   C+   +  A E
Sbjct: 315 RPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVE 374

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  +M + G  PD+VS++T+I  FS   + D AL   + M      PD + +  ++   C
Sbjct: 375 VLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLC 431

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           +     +A+++  +ML+K C ++ +T+N +++ LC+   + +A ++F  M +    PD  
Sbjct: 432 KAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIV 491

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+++LI+G  + G    A +LF  M  ++   DI +YN  + G C     + A +L ADM
Sbjct: 492 TYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADM 548

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL---------------- 345
           ++    PN +++ ILI+  C  G V  A  ++ +M   GI P +                
Sbjct: 549 VTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRL 608

Query: 346 ----------------VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
                           +S N+I+KG CR+     A++ +++M+ +   P+ +++      
Sbjct: 609 DDALKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQL 668

Query: 390 FVR 392
           F++
Sbjct: 669 FIK 671



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 210/418 (50%), Gaps = 11/418 (2%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P V + N LI  LC + R   A+ VL E L+   + D  ++NTL+   CR  ++ +AE +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVL-EALKASGAADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             E +R     ++V+++ LI  + R+G+L  AL   R + S  + PD   Y  ++ G C 
Sbjct: 173 V-EAARASGTANVVTYTALIDGYCRSGRLADAL---RLIASMPVAPDTYTYNTVLKGLCC 228

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
                +A ++  EM+   C  + VT+ T +   C+  +L  A +L  +M + G  PD   
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           ++TL++G  + G +++AL L + M     +P+ V YN  + G C  G  E+  +L A+M+
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMV 345

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
            +   PN  ++  LIN  C    V  A  +  +M   G  P +VS NTII  +    D +
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCF---SDQA 402

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +AD+ L  + S    PD+IS+N ++    + +    A  LV+KM  +    + +T+N+++
Sbjct: 403 RADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILI 462

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
              C+ G++ D+  +   M +    PD  TY++LING   Q   + AF     M  R 
Sbjct: 463 DSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA 520



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
           P ++SCN +IK  C     + A+  L  + + G   D++S+NTL+ G+ R+ ++  A  +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           V      G   +V+TY  ++ G+CR GR+ D+  ++  M    + PD  TY T++ G   
Sbjct: 173 VEAARASGTA-NVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCC 228

Query: 463 QNNLKEAFRFHDEMLQRGFVPDD 485
               ++A     EM++    P++
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNE 251


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 240/468 (51%), Gaps = 2/468 (0%)

Query: 15  KMFLCEMEQKGVYPDTV-TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
           ++F C    +  +  +V T N L++ + R     EA  L+ +       P V T+N LI 
Sbjct: 43  ELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLIT 102

Query: 74  GLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA 132
           G C     + A  V+ EM +  G++P   T+N +L   C+   +  A + F   +  G  
Sbjct: 103 GYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCT 162

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
            DI +++ ++   ++N ++  A+    ++ + G  P    Y  ++NG C+ G + EA+ +
Sbjct: 163 IDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDL 222

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
             ++++ GC  DVVTY ++++GL + K   EA  LF EM  RG+  D   +T LI G  +
Sbjct: 223 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQ 282

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            G + +A +++  MT +   PD+VT +T+IDG CK G +  A +++  M +R ++PN + 
Sbjct: 283 AGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVV 342

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y  LI+G C    +  A  +  +M      P  ++ N +I G C+SGD   A  F  +M+
Sbjct: 343 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 402

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
             G  PD  +YN L++GF +  N D A  +   M +    P+V+TY  +++G C++ ++ 
Sbjct: 403 EAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLT 462

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            + L    M E+G  PD   Y++L++G      L+      DEM + G
Sbjct: 463 KASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 510



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 237/472 (50%), Gaps = 3/472 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQK-GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           ++   C   + + A   + EME+  GV P   T+N +++  C+ G +  A     + +  
Sbjct: 100 LITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTN 159

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G    + TY ++++ L K  +   A  +++++   G +P  ATYN LL   C+   + EA
Sbjct: 160 GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 219

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++  ++   G  PD+V++++LI    +  +   A   F+EM   GLV D V YT +I G
Sbjct: 220 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRG 279

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G + +A  +   M  +GCV DVVT +T+++GLC+A  +  A  +F  M  RG+ P+
Sbjct: 280 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 339

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              ++ LIHG CK   M+ AL +   M +    PD +TYN LIDG CK G++E A   + 
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 399

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+     P+  +Y IL++G+C  G+   A  ++ +M      P +V+  T+I G C+  
Sbjct: 400 EMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRR 459

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             +KA  +   M   G  PDS  Y++L++G  +   ++    L  +ME  G V +  T  
Sbjct: 460 QLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRT 518

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            ++   C+  R+ D  + L+  I K   P    Y ++I+  +    +    R
Sbjct: 519 RLIFHLCKANRV-DEAVSLFNAIRKEGMPHPYAYNSIISTLIKSAKVNPCTR 569



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 1/282 (0%)

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           V T N +L+   R K   EA +L    L     PD  T+  LI G+C      +A  +  
Sbjct: 59  VHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIR 118

Query: 265 IMTQK-SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            M +   + P + T+N ++ G CK G++  A   +    +   + +  +Y  +++     
Sbjct: 119 EMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKN 178

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             + +A  L  ++   G  PT+ + N ++ G C+ G   +A + L K+V  G  PD ++Y
Sbjct: 179 KKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 238

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            +LI+G  +E+   +A+ L  +M  +GLV D + Y  ++ G  + G++  +  +   M  
Sbjct: 239 TSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTS 298

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +G  PD  T +T+I+G      +  A R    M  RG  P++
Sbjct: 299 QGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNE 340


>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
 gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
          Length = 796

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 248/472 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  + + A   L +ME  G  P  VTYN+LI+AY ++G LEEA +L   M  +G
Sbjct: 297 LLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRG 356

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V TY +LI+GL + G+ D A     EM++ G SP+  TYN L+     +   +E  
Sbjct: 357 MKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMM 416

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F ++   G  PD+V+++TL+ +F +NG        F+EMK AG +P+   Y  +I+ Y
Sbjct: 417 IVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 476

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A+++   M+E G   D+ TYN +L+ L R     +A+ LF EM +R   PD 
Sbjct: 477 SRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDE 536

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++++L+H +     ++K   L + +  + I+P      TL+    KV  + +  K + +
Sbjct: 537 LSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQE 596

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R+ S +      +++ Y     V +   +   M    I  +  + N+++  Y R GD
Sbjct: 597 LRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGD 656

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K +  L+++ S G+ PD  SYNT+I  + R+  M +A  L S+M+  G+ PD++TYN+
Sbjct: 657 CEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNI 716

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            +  +       ++  ++  ++ +G  P+  TY +++ G+     + EA  F
Sbjct: 717 FIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSF 768



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 249/500 (49%), Gaps = 35/500 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M++ G+  D  TYNTLI+   R G   EA Q+ + M   G +P   T+NSL++   K  R
Sbjct: 247 MKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARR 306

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A  VL +M   G +P   TYN+L+    +   + EA E+  EM  RG+ PD+V+++T
Sbjct: 307 HEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 366

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    R G++D AL  + EM   G  P+   Y  +I  +   G   E + + D++   G
Sbjct: 367 LISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAG 426

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            V DVVT+NT+L    +  + +E   +F EM + G  P+  T+ +LI  + + G  ++A+
Sbjct: 427 YVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 486

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            ++  M +  I PDI TYN ++    + G   +A KL+A+M  R   P+ +SY  L++ Y
Sbjct: 487 EIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAY 546

Query: 321 CSMGHVTEAFRLWYEMVGKGIKP------TLV----------------------SC---- 348
            +   + +   L  ++  + I+P      TLV                       C    
Sbjct: 547 ANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDI 606

Query: 349 ---NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
              N ++  Y ++    K +E L+ M    ++  + +YN+L++ + R  + +K  A++++
Sbjct: 607 NVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTE 666

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +++ G+ PD  +YN ++  + R+G+M ++  +   M   G+ PD  TY   I  +V+   
Sbjct: 667 IKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLM 726

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
            +EA      ++ +G  P++
Sbjct: 727 FEEAIDLVRYLVAQGCKPNE 746



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 201/388 (51%), Gaps = 3/388 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD   Y  L++ + R G   +A  +   M   G++P + TYN +++   K     +   V
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242

Query: 88  L-DEMLQMGLSPDTATYNTLLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           L D M + G+  D  TYNTL +  CR+  +  EA ++F EM   G  PD V+F++L+ ++
Sbjct: 243 LVDSMKEDGIELDRYTYNTL-ISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY 301

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  + + A+   ++M++AG  P  V Y  +I+ Y ++G + EAL+++ EM  +G   DV
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY T+++GL R   +  A   ++EM+  G  P+  T+  LI  H   G   + + +FD 
Sbjct: 362 VTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDD 421

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +      PD+VT+NTL+  F + G   + + ++ +M      P   +Y  LI+ Y   G 
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 481

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +A  ++  M+  GI P + + N ++    R G   +A++  ++M      PD +SY++
Sbjct: 482 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSS 541

Query: 386 LINGFVREENMDKAFALVSKMENQGLVP 413
           L++ +   + +DK  AL   +  Q + P
Sbjct: 542 LLHAYANAKKLDKMKALSEDIYAQRIEP 569



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 187/373 (50%), Gaps = 4/373 (1%)

Query: 3   NALCKDH----KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           NAL K H    K     +   ++   G  PD VT+NTL+  + + G   E   +   M  
Sbjct: 400 NALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKK 459

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G  P   TY SLI+   + G  D+A E+   M++ G+ PD +TYN +L    R     +
Sbjct: 460 AGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQ 519

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           AE++F EM  R   PD +S+S+L+  ++   +LD+      ++ +  + P N L   ++ 
Sbjct: 520 AEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVL 579

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
              +   + E  K   E+  + C +D+   N +++   + KM+ + +++   M E  +  
Sbjct: 580 VNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINH 639

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
              T+ +L+H + + G+  K   +   +    ++PD  +YNT+I  + + G+M++A++L+
Sbjct: 640 SAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 699

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           ++M    + P+ ++Y I I  Y +     EA  L   +V +G KP   + N+I++GYCR 
Sbjct: 700 SEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRH 759

Query: 359 GDASKADEFLSKM 371
           G   +A  FLS +
Sbjct: 760 GRMVEAKSFLSNL 772



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 176/355 (49%), Gaps = 1/355 (0%)

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL-EAL 190
           APD  +++ L+  FSR G+   A+  FR M   G+ P  V Y ++++ Y +      E +
Sbjct: 182 APDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVV 241

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            + D M E G  +D  TYNT+++   R  +  EA  +F+EM   G  PD  TF +L+  +
Sbjct: 242 VLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY 301

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
            K     +A+ +   M      P +VTYN+LI  + K G +E+A +L  +M  R + P+ 
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LI+G   +G +  A   + EMV  G  P L + N +IK +   G  ++       
Sbjct: 362 VTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDD 421

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           + S G  PD +++NTL+  F +     +   +  +M+  G +P+  TY  +++ + R G 
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 481

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
              +  I  RMIE G+ PD STY  +++         +A +   EM  R   PD+
Sbjct: 482 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDE 536



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 35/266 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL +  +   A+    EME +   PD ++Y++L++AY     L++   L   +  + 
Sbjct: 507 VLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQR 566

Query: 61  LKPGVFTYNSLI------NGLC---------KKGRCD--------------------RAK 85
           ++P  +   +L+      N L          ++ RC                     + +
Sbjct: 567 IEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVE 626

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           EVL  M +  ++   ATYN+L+    R  +  + E I  E+   G+ PD  S++T+I  +
Sbjct: 627 EVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAY 686

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R GQ+  A   F EMK +G+ PD V Y I I  Y  N    EA+ +   ++ +GC  + 
Sbjct: 687 GRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNE 746

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEM 231
            TYN+IL G CR   + EA    + +
Sbjct: 747 RTYNSILEGYCRHGRMVEAKSFLSNL 772



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 60/112 (53%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            L E++  G+ PD  +YNT+I AY R+G ++EA +L + M   G+KP + TYN  I    
Sbjct: 663 ILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYV 722

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
                + A +++  ++  G  P+  TYN++L   CR   M EA+     + +
Sbjct: 723 ANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPK 774


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 243/492 (49%), Gaps = 10/492 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC   +I  A   L EM  +   P    Y+ +I + CR G    A +++ ++  KG
Sbjct: 122 VVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKG 181

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                   N +IN +C +G  D   E+L ++   G   D  +YN +L   C  +   + E
Sbjct: 182 STLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVE 241

Query: 121 EI----------FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           E+            +M++ G  PDI  ++T+I    + G  + A      M S GL P+ 
Sbjct: 242 ELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNV 301

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           V Y  ++ G C      +A ++  EM +K C +D VT+N +++  C+  ++    +L  +
Sbjct: 302 VCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 361

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           MLE G  PD  T+TT+I+G CK+G +++A+ L   M     KP+ ++Y  ++ G C    
Sbjct: 362 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTER 421

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
              A +L + MI +   PN +++  +IN  C  G V +A  L  +M+  G  P L+S +T
Sbjct: 422 WVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYST 481

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I G  ++G   +A E L+ M+++G+ P+ I+Y+++     RE  +DK   +   +++  
Sbjct: 482 VIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDAT 541

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           +  D + YN +++  C++     +   L  M+  G  P+ STYT LI G  S+  L EA 
Sbjct: 542 IRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQ 601

Query: 471 RFHDEMLQRGFV 482
               E+  R  V
Sbjct: 602 DLLSELCSRRAV 613



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 230/461 (49%), Gaps = 16/461 (3%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           + LI + C  G   +A + +++    G   GV  YN+++ G C+ G+ + A+ +      
Sbjct: 56  SALIRSLCVAGRTADAVRALDA---AGNAAGVVDYNAMVAGYCRVGQVEAARRL---AAA 109

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           + + P+  TY  ++   C +  +++A  +  EM+ R   P    +  +I    R+G    
Sbjct: 110 VPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           AL     + + G   D     ++IN  C  G V E L+M  ++   GC  D+V+YN +L 
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229

Query: 214 GLCRAKMLTEADDLFNEML----------ERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           GLC AK   + ++L +EM+          + G  PD   + T+I G CK+G+   A  + 
Sbjct: 230 GLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEIL 289

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M    +KP++V YNT++ G C     EKA +L  +M  +    + +++ IL++ +C  
Sbjct: 290 SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQN 349

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G V     L  +M+  G  P +++  T+I G+C+ G   +A   L  M S G  P++ISY
Sbjct: 350 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISY 409

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
             ++ G    E    A  L+S+M  QG +P+ +T+N I+   C++G +  +  +L +M+ 
Sbjct: 410 TIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLV 469

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G NPD  +Y+T+I+G       +EA    + M+ +G  P+
Sbjct: 470 NGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 510


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 251/472 (53%), Gaps = 7/472 (1%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K+ +A   L  M++ G+ PD    NT I+       L++A + +  M    + P V TYN
Sbjct: 184 KLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYN 243

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR- 128
            LI G C   R + A E++ EM   G SPD  +Y T++   C+++ + E   +  +M + 
Sbjct: 244 CLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKD 303

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
             + PD V+++T + + S++G  D AL + RE +      D V Y+ I++ +CR G + +
Sbjct: 304 SNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDK 363

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A ++ +EM  KGC+ DVVTY +++NGLC+ + + +A  +  +M + G  P+  ++T L++
Sbjct: 364 AKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLN 423

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G CK+GN  +A  + ++  +    P+ +TY+ L+ GF + G+  +A  L  +MI +   P
Sbjct: 424 GLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFP 483

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
             +   +LI   C    V EA R   + +  G    +V+  T+I G+C+  D   A   L
Sbjct: 484 TPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLL 543

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             M      PD ++Y T+I+   ++  +++A  L  KM   G +P  +TY  ++  +CR 
Sbjct: 544 DDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRM 603

Query: 429 GRMHDSELILWRMIEKGLNPD--RSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           GR+ D    L +++EK L+    R+ Y  +I    S  NL++A++   ++L+
Sbjct: 604 GRVED----LLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLR 651



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 248/480 (51%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L K      AK  L  M ++ +      +  ++ +Y R G L  A + +  M   G
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAG 199

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +   N+ I+ L    R D+A   L+ M  + + P+  TYN L+   C    + +A 
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAX 259

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
           E+  EM  +G +PD +S+ T++G   +  ++    +   +M K + L+PD V Y   ++ 
Sbjct: 260 ELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHM 319

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++G   EAL+   E  E+   +D V Y+ I++  CR   + +A ++ NEM  +G  PD
Sbjct: 320 LSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPD 379

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T++I+G C++  +++A  +   M +   KP+ V+Y  L++G CK G   +A ++  
Sbjct: 380 VVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMN 439

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                   PN I+Y +L++G+   G  +EA  L  EM+ KG  PT V  N +I+  C+  
Sbjct: 440 MSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE 499

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A  F+ + ++ G   + +++ T+I+GF ++++++ A +L+  M      PDV+TY 
Sbjct: 500 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            I+    ++GR+ ++  +  +M+  G  P   TY T+I+ +     +++  +  ++ML R
Sbjct: 560 TIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 238/481 (49%), Gaps = 38/481 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++   C  H+++ A   + EM  KG  PD ++Y T++   C+E  ++E   LM  M    
Sbjct: 245 LIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDS 304

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            L P   TYN+ ++ L K G  D A E L E  +     D   Y+ ++   CR+  M +A
Sbjct: 305 NLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKA 364

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +EI  EM  +G  PD+V+++++I    +  ++D+A    R+M   G  P+ V YT ++NG
Sbjct: 365 KEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNG 424

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP- 238
            C+NG  LEA +M +   E   + + +TY+ +++G  R    +EA DL  EM+++G FP 
Sbjct: 425 LCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPT 484

Query: 239 ----------------------------------DFYTFTTLIHGHCKDGNMNKALNLFD 264
                                             +   FTT+IHG C+  ++  AL+L D
Sbjct: 485 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 544

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M   +  PD+VTY T+ID   K G +E+A KL   M+     P  ++Y  +I+ YC MG
Sbjct: 545 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMG 604

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +  +L  +M+ +  +    + N +I+  C  G+  +A + L K++      D+ + +
Sbjct: 605 RVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH 662

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI  ++ +     ++ +  +M N+ L+PD+     +      +G+  +++ ++ R +E+
Sbjct: 663 MLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVER 722

Query: 445 G 445
           G
Sbjct: 723 G 723



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 212/420 (50%), Gaps = 1/420 (0%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
             Y +++  L K   C  AK VL  M +  +      +  ++V   R   +  A      
Sbjct: 135 IVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTM 194

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M + G+ PD+   +T I +     +LD+A+ +   M+   + P+ + Y  +I GYC    
Sbjct: 195 MQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHR 254

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-ERGVFPDFYTFT 244
           + +A ++  EM  KGC  D ++Y T++  LC+ K + E   L  +ML +  + PD  T+ 
Sbjct: 255 LEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYN 314

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           T +H   K G+ ++AL       ++  + D V Y+ ++  FC+ G M+KA ++  +M S+
Sbjct: 315 TFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK 374

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              P+ ++Y  +ING C    V +A ++  +M   G KP  VS   ++ G C++G++ +A
Sbjct: 375 GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEA 434

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E ++        P++I+Y+ L++GF RE    +A  LV +M  +G  P  +  N+++  
Sbjct: 435 REMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQS 494

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C++ ++ +++  + + +  G   +   +TT+I+G   +++L+ A    D+M      PD
Sbjct: 495 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 554



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 1/218 (0%)

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           Q   + D + Y  +++   K    + A ++   M  R+I     ++G ++  Y   G + 
Sbjct: 127 QWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLR 186

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A R    M   GI+P L  CNT I          KA  FL +M    + P+ I+YN LI
Sbjct: 187 NAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLI 246

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI-EKGL 446
            G+     ++ A  L+++M  +G  PD I+Y  ++   C++ R+ +  L++ +M+ +  L
Sbjct: 247 KGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNL 306

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            PD+ TY T ++      +  EA  F  E  +R F  D
Sbjct: 307 LPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVD 344


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 259/487 (53%), Gaps = 6/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  +I+ A   L  M  + + PD  +Y TLIN   + G L  A ++ + MS +G
Sbjct: 157 LIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRG 216

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
           +   V  YN LI+G  K G  D+ KE+ + +++   + P+  TYN ++   C+     E+
Sbjct: 217 VVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDES 276

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            EI+  M++     D+ ++S+LI      G +D A+  ++E+  + LV D V +  ++NG
Sbjct: 277 LEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNG 336

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR G + E+ ++   M ++ C   VV+YN ++ GL     + EA  ++  + ++G  P+
Sbjct: 337 FCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPE 395

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+  LIHG CK+G +NKAL +F        K D   Y++++DG CK G M++A  +  
Sbjct: 396 STTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVN 455

Query: 300 DMISR--KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
            M  R  K+ P+  +   LING+     + +A   + EM  KG  PT+VS NT+IKG C+
Sbjct: 456 QMDKRGYKLDPHVCN--PLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCK 513

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +   S+A  F+ +M+ +   PD I+ + L++G  +E+ ++ A  L  +  ++G  PD+  
Sbjct: 514 AERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITM 573

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN+++ G C   ++ D+  +   M      P+  T  TL+ G     + ++A    D +L
Sbjct: 574 YNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCIL 633

Query: 478 QRGFVPD 484
           + G  PD
Sbjct: 634 KDGLHPD 640



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 260/486 (53%), Gaps = 4/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++NA  + ++ D A+ F    E   V P+  TYN LI   C++  +E+A  L++ M  + 
Sbjct: 122 LLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQN 181

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP VF+Y +LING+ K G    A +V DEM   G+  D   YN L+    +  +  + +
Sbjct: 182 LKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGK 241

Query: 121 EIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           EI+  + +   V P++V+++ +I    + G+ D +L  +  M       D   Y+ +I+G
Sbjct: 242 EIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHG 301

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C  G +  A+++  E++E   V+D VT+N +LNG CRA  + E+ +L+  M +      
Sbjct: 302 LCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC-QT 360

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++  LI G  ++G + +A+++++++ +K  +P+  TY  LI G CK G + KA K++ 
Sbjct: 361 VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFK 420

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +        +  +Y  +++G C  G + EA  +  +M  +G K     CN +I G+ R+ 
Sbjct: 421 EAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRAS 480

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A  F  +M  +G  P  +SYNTLI G  + E   +A++ V +M  +   PD+IT +
Sbjct: 481 KLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCS 540

Query: 420 VILTGFCRQGRMHDSELILWRM-IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           +++ G C++ ++ +  L LW+  ++KG  PD + Y  L++G  S   L++A + +  M +
Sbjct: 541 LLMDGLCQEKKI-EMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKR 599

Query: 479 RGFVPD 484
              VP+
Sbjct: 600 STCVPN 605



 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 228/438 (52%), Gaps = 1/438 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
            VYP+ VTYN +IN  C+ G  +E+ ++   M+    +  +FTY+SLI+GLC+ G  D A
Sbjct: 252 SVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGA 311

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             V  E+++  L  D  T+N +L   CR   + E+ E++  M +      +VS++ LI  
Sbjct: 312 VRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKG 370

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
              NG+++ A+  +  +   G  P++  Y ++I+G C+NG + +ALK+  E  +    +D
Sbjct: 371 LFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLD 430

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
              Y+++++GLC+   + EA  + N+M +RG   D +    LI+G  +   +  A+N F 
Sbjct: 431 AYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFR 490

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K   P IV+YNTLI G CK     +A     +M+ ++  P+ I+  +L++G C   
Sbjct: 491 EMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEK 550

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            +  A  LW + + KG KP +   N ++ G C       A +  S M      P+ ++ N
Sbjct: 551 KIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRN 610

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TL+ G  +  + +KA  +   +   GL PD+I+YN+ + G C   R+ D+   L   + +
Sbjct: 611 TLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNR 670

Query: 445 GLNPDRSTYTTLINGHVS 462
           G+ P   T+  L+   V+
Sbjct: 671 GILPTAVTWNILVRAAVN 688



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 242/461 (52%), Gaps = 2/461 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G  P   +YNTL+NA+      + A           + P + TYN LI   CKK + ++A
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKA 170

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             +LD M    L PD  +Y TL+    +  ++  A ++F EMS RGV  D+  ++ LI  
Sbjct: 171 ISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDG 230

Query: 145 FSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
           F ++G  D+   ++ R +K   + P+ V Y I+ING C+ G   E+L++ + M +     
Sbjct: 231 FFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREK 290

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D+ TY+++++GLC A  +  A  ++ E++E  +  D  T   +++G C+ G + ++  L+
Sbjct: 291 DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELW 350

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            +M +++ +  +V+YN LI G  + G++E+A  +W  +  +   P   +YG+LI+G C  
Sbjct: 351 MVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKN 409

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G + +A +++ E      K    + ++++ G C+ G   +A   +++M   G   D    
Sbjct: 410 GRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVC 469

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N LINGFVR   ++ A     +ME +G  P +++YN ++ G C+  R  ++   +  M+E
Sbjct: 470 NPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLE 529

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           K   PD  T + L++G   +  ++ A     + L +GF PD
Sbjct: 530 KEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPD 570



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 207/391 (52%), Gaps = 1/391 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+   ID A     E+ +  +  D VT+N ++N +CR G ++E+F+L   M GK 
Sbjct: 298 LIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVM-GKE 356

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V +YN LI GL + G+ + A  + + + + G  P++ TY  L+   C+   +++A 
Sbjct: 357 NCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKAL 416

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF E        D  ++S+++    + G++D A+    +M   G   D  +   +ING+
Sbjct: 417 KIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGF 476

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R   + +A+    EM  KGC   +V+YNT++ GLC+A+  +EA     EMLE+   PD 
Sbjct: 477 VRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDM 536

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T + L+ G C++  +  ALNL+     K  KPDI  YN L+ G C V ++E A +L++ 
Sbjct: 537 ITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSH 596

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN ++   L+ G   +    +A  +W  ++  G+ P ++S N  IKG C    
Sbjct: 597 MKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSR 656

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
            S A EFL+  ++ G+ P ++++N L+   V
Sbjct: 657 ISDAIEFLNDALNRGILPTAVTWNILVRAAV 687



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 1/136 (0%)

Query: 350 TIIKGYCRSGDASKA-DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
           T+IK Y ++  ++KA D F +     G  P   SYNTL+N FV     D+A +     E+
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
             + P++ TYN+++   C++ ++  +  +L  M  + L PD  +Y TLING V   +L  
Sbjct: 145 MDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLG 204

Query: 469 AFRFHDEMLQRGFVPD 484
           A +  DEM  RG V D
Sbjct: 205 ALKVFDEMSVRGVVAD 220


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/442 (33%), Positives = 248/442 (56%), Gaps = 24/442 (5%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           EAF L  +   +  +P  F+ N+L+  L +  R D A       L+  +SPD  T+N ++
Sbjct: 137 EAFLLAGADCPR-YRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVI 195

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY-----FREMK 162
              C+   + +A ++   +S  GVAP + +++TLI  + + GQ+ +  MY      +EM 
Sbjct: 196 SGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGK--MYHVDALLKEMI 253

Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
            AG+ PD V + ++INGYC+   +  A+K+  EM ++G   +VVTYN++++GLCR   + 
Sbjct: 254 QAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVE 313

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           ++  L  EM E G+     T  ++++G CK G M +A    D + Q+ +KP+++TYNTL+
Sbjct: 314 DSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLV 373

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           DG+ ++G+M++A      M  + ISPN  +Y  LI G+ +         L  EM  KG+K
Sbjct: 374 DGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVK 433

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
             +V+ N +I   C  G+  KA + L +MV  G++P  ++YNT+INGF  + +   A  +
Sbjct: 434 ADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEI 493

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +ME +    +V+TYNV L  FC+ G+M ++ ++L  M+EKGL P+R TY  + +G   
Sbjct: 494 RLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG--- 550

Query: 463 QNNLKEAFRFHDEMLQRGFVPD 484
                        M+++G+VPD
Sbjct: 551 -------------MIEKGYVPD 559



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/440 (31%), Positives = 236/440 (53%), Gaps = 19/440 (4%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   + N L+ A  R   ++ A +   +   + + P +FT+N +I+G CK G+  +A +V
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKEN---MSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
              +   G++P  ATYNTL+   C++     M   + +  EM + G++PD+V+F+ LI  
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLING 270

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + +   +  A+  F+EM+  G+  + V Y  +++G CR G V +++K+ +EM E G    
Sbjct: 271 YCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACI 330

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + T N++LNG C+  M+ EA+   + + +RG+ P+  T+ TL+ G+ + G M +A    D
Sbjct: 331 LSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKD 390

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K I P++ TYN LI GF    +    + L  +M  + +  + ++Y +LI   C  G
Sbjct: 391 AMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKG 450

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A +L  EMV  G++P  V+ NTII G+C  GDA  A E   +M       + ++YN
Sbjct: 451 EVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYN 510

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             +  F +   MD+A  ++++M  +GLVP+ ITY +I +G                MIEK
Sbjct: 511 VFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG----------------MIEK 554

Query: 445 GLNPDRSTYTTLINGHVSQN 464
           G  PD S Y   ++ +++ +
Sbjct: 555 GYVPDISGYAADVSKNLTSS 574



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 228/421 (54%), Gaps = 19/421 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL +  ++D A        ++ V PD  T+N +I+ +C+ G L +A  +  ++S  G
Sbjct: 159 LLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDVAKNISAWG 218

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEV---LDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           + P V TYN+LI+G CK+G+  +   V   L EM+Q G+SPD  T+N L+   C++ N++
Sbjct: 219 VAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNIT 278

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A ++F EM ++G+  ++V++++L+    R G+++ ++    EM+  GL         ++
Sbjct: 279 AAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVL 338

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG+C+ G ++EA    D + ++G   +V+TYNT+++G  R   + EA    + M  +G+ 
Sbjct: 339 NGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGIS 398

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  LI G     +      L D M +K +K D+VTYN LI   C  GE+ KA KL
Sbjct: 399 PNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKL 458

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M+   + P +++Y  +ING+C  G    A  +   M  +  +  +V+ N  +K +C+
Sbjct: 459 LDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCK 518

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A+  L++M+ +G+ P+ I+Y  + +G +                 +G VPD+  
Sbjct: 519 MGKMDEANVVLNEMLEKGLVPNRITYEIINSGMI----------------EKGYVPDISG 562

Query: 418 Y 418
           Y
Sbjct: 563 Y 563



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 158/301 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK+  I +A     EM Q+G+  + VTYN+L++  CREG +E++ +L+  M   G
Sbjct: 267 LINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELG 326

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   + T NS++NG CKKG    A+  +D + Q G+ P+  TYNTL+    R   M EA 
Sbjct: 327 LACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAA 386

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M+ +G++P++ +++ LI  F+ +           EMK  G+  D V Y ++I   
Sbjct: 387 AAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGAL 446

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A+K+ DEM+E G     V YNTI+NG C       A ++   M +R    + 
Sbjct: 447 CCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANV 506

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+   +   CK G M++A  + + M +K + P+ +TY  +  G  + G +   +   AD
Sbjct: 507 VTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDISGYAAD 566

Query: 301 M 301
           +
Sbjct: 567 V 567


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 249/468 (53%), Gaps = 19/468 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR-EGFLEEAFQLMNSMSGK 59
           +++ L K  +   A     EM ++G+ P  VTYNTLINA CR +G + +A ++ + M  +
Sbjct: 157 VLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINA-CRFQGTVAKAQEVWDQMVAQ 215

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            + P V TY ++I  LC++G    A+ + D M + G+ P+  TYN L+   C++++++ A
Sbjct: 216 QIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSA 275

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++ E+ + G+ P+ V F+TLI  F +  +   A   F EM   G+ P   +Y  +++G
Sbjct: 276 VVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDG 335

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             R+G   EAL +  EM   G   D  T + ++ GLC    +  AD     + E GV  +
Sbjct: 336 AFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLN 395

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +  LI  +C+ GN+ +AL     MT+  I+P++V+Y++LIDG  K G+M+ A  ++ 
Sbjct: 396 AAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYT 455

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+++ I PN ++Y  LI+G+   G +  AFRL  EM+  GI P  ++ + ++ G CR  
Sbjct: 456 EMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCREN 515

Query: 360 DASKADEFLSK-----------------MVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
              +A  F+ +                 +  E + P+S+ Y TLI G   +    +A  L
Sbjct: 516 RVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKL 575

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            S M   G++PD  TY +++ G C  G + ++ ++   M++ G+ P R
Sbjct: 576 FSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTR 623



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 247/469 (52%), Gaps = 22/469 (4%)

Query: 35  TLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            L+ A  + G L+EA  +   +      P +   N++++GL K  R   A E+ DEML+ 
Sbjct: 124 VLVIALSQMGLLDEALYVFRRLR---TLPALPACNAVLDGLVKARRPGCAWELFDEMLRR 180

Query: 95  GLSPDTATYNTLLVESCR-KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           GL P   TYNT L+ +CR +  +++A+E++ +M  + + P++V+++T+I      G +  
Sbjct: 181 GLVPSVVTYNT-LINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGD 239

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A   F  MK AG+ P+   Y ++++G+C+   V  A+ +  E+L+ G   + V + T+++
Sbjct: 240 AERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLID 299

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           G C+AK  +EA  +F EM   GV P    + +L+ G  + GN  +AL L+  MT+  + P
Sbjct: 300 GFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCP 359

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D  T + ++ G C  G+M  A++    +    ++ N  +Y  LI+ YC +G++ EA    
Sbjct: 360 DEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATC 419

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
             M   GI+P +VS +++I G+ + G    A    ++MV++G++P+ ++Y  LI+G  + 
Sbjct: 420 TRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKN 479

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL--------------- 438
             +D AF L  +M   G+ P+ IT +V++ G CR+ R+ ++   +               
Sbjct: 480 GGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVF 539

Query: 439 --WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             + + E+ L P+   Y TLI G        EA +    M + G +PD 
Sbjct: 540 SNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDS 588



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 232/452 (51%), Gaps = 17/452 (3%)

Query: 49  AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLV 108
           A++L + M  +GL P V TYN+LIN    +G   +A+EV D+M+   + P+  TY T++ 
Sbjct: 170 AWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMIC 229

Query: 109 ESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP 168
             C +  + +AE +F  M   G+ P+  +++ L+    +   ++ A++ ++E+  +GL P
Sbjct: 230 ALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNP 289

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           + V++T +I+G+C+     EA  M  EM   G    V  YN++++G  R+    EA  L+
Sbjct: 290 NAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALY 349

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            EM   G+ PD +T + ++ G C  G M+ A      + +  +  +   YN LID +C++
Sbjct: 350 QEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRI 409

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G +E+A      M    I PN +SY  LI+G+   G +  A  ++ EMV KGI+P +V+ 
Sbjct: 410 GNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTY 469

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK--- 405
             +I G+ ++G    A     +M+  G+ P++I+ + L++G  RE  + +A   V +   
Sbjct: 470 TALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSG 529

Query: 406 --------------MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
                         +E + L+P+ + Y  ++ G    G+  ++  +   M + G+ PD  
Sbjct: 530 LKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSF 589

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           TYT LI G      +  A   + +M++ G  P
Sbjct: 590 TYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 125/258 (48%), Gaps = 17/258 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC   ++  A  FL  +++ GV  +   YN LI+ YCR G LEEA      M+  G
Sbjct: 367 VVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVG 426

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V +Y+SLI+G  K+G+   A  +  EM+  G+ P+  TY  L+    +   +  A 
Sbjct: 427 IEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAF 486

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE-----------------MKS 163
            +  EM   G++P+ ++ S L+    R  ++  A+ +  E                 ++ 
Sbjct: 487 RLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEE 546

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
             L+P++V+Y  +I G   +G   EA K+   M + G + D  TY  ++ G C    +  
Sbjct: 547 ECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLN 606

Query: 224 ADDLFNEMLERGVFPDFY 241
           A  L+ +M++ GV P  Y
Sbjct: 607 AMMLYADMMKIGVKPTRY 624


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 242/451 (53%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D  T N +++  C++G L EA +L++ MS     P      +LI GL + GR +RA  VL
Sbjct: 21  DEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVL 80

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
             M+  GL PD  TYN ++   C++  +  A ++  +MS  G  PD+++++T+I     N
Sbjct: 81  KTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDN 140

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+ D+A+ ++R     G +P  + YTI+I    ++   + AL++ ++M  +GC  D+VTY
Sbjct: 141 GKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTY 200

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N+++N   +     +A  +   +L  G+ P+  T+ +L+H  C  G  ++   +  IM +
Sbjct: 201 NSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKK 260

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
            S  P +VTYN LI+G CK G +E+A   +  M+S   SP+ I+Y  L+   C  G V E
Sbjct: 261 TSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDE 320

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A +++  +      P L++ NT+I G  R G   +A +  ++M+ +G+ PD I++ +L+ 
Sbjct: 321 ALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVW 380

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           GF   + ++ A  ++ +M  +    +   Y +++ G CR  R+  +  +L  MI     P
Sbjct: 381 GFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKP 440

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           D   Y+TLI        ++EA   H ++++R
Sbjct: 441 DEEIYSTLIKSVADAGMVEEADELHQKLIER 471



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 212/420 (50%), Gaps = 2/420 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T N +++ LCKKG    A +++D M ++   P++     L+    R   +  A  +   M
Sbjct: 24  TNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTM 83

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
              G+ PD+++++ ++G F +  QL  A+    +M  +G  PD + Y  II     NG  
Sbjct: 84  VMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKF 143

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            +A++     L +GC+  ++ Y  ++  + +      A ++  +M   G +PD  T+ +L
Sbjct: 144 DQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSL 203

Query: 247 IHGHCKDGNM-NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           ++   K+G   + AL +++I++   ++P+ +TYN+L+   C  G  ++ +++ A M    
Sbjct: 204 VNFASKEGKYEDAALIIYNILSH-GMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTS 262

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P  ++Y ILING C  G V  A   + +MV +   P +++ NT++   C+ G   +A 
Sbjct: 263 HPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEAL 322

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +    +      P  I+YNT+I+G  R   MD+A  L ++M  +G+ PD IT+  ++ GF
Sbjct: 323 QVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGF 382

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C   ++ D+  IL  M ++    + S Y  +ING      +  A +  + M+   + PD+
Sbjct: 383 CWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDE 442



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 188/376 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV   CK  ++ SA   L +M   G  PD +TYNT+I +    G  ++A +       +G
Sbjct: 98  MVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRG 157

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +  Y  LI  + K     RA EVL++M   G  PD  TYN+L+  + ++    +A 
Sbjct: 158 CLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAA 217

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   +   G+ P+ +++++L+      G  D        MK     P  V Y I+ING 
Sbjct: 218 LIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGL 277

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V  A+    +M+ + C  D++TYNT+L  LC+  M+ EA  +F  + +    P  
Sbjct: 278 CKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGL 337

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ T+I G  + G M++AL L++ M +K I PD +T+ +L+ GFC + ++E A ++  +
Sbjct: 338 ITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILRE 397

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R    N  +Y ++ING C    V  A ++   M+    KP     +T+IK    +G 
Sbjct: 398 MGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGM 457

Query: 361 ASKADEFLSKMVSEGV 376
             +ADE   K++   V
Sbjct: 458 VEEADELHQKLIERKV 473



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 128/281 (45%)

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D  T N IL+ LC+   L EA  L + M      P+    T LI G  + G + +A  + 
Sbjct: 21  DEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVL 80

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M    + PD++TYN ++ GFCK  ++  A  L  DM      P+ I+Y  +I      
Sbjct: 81  KTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDN 140

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G   +A   W   + +G  P L+    +I+   +     +A E L  M  EG  PD ++Y
Sbjct: 141 GKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTY 200

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N+L+N   +E   + A  ++  + + G+ P+ ITYN +L   C  G   + + IL  M +
Sbjct: 201 NSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKK 260

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
               P   TY  LING      ++ A  F  +M+     PD
Sbjct: 261 TSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPD 301



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 37/228 (16%)

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILINGYCSMGHVTEA 329
           ++ D  T N ++   CK G + +A KL  D++SR    PN      LI G   +G +  A
Sbjct: 18  VENDEETNNEILHNLCKKGSLMEATKL-IDIMSRVNQIPNSTCSTNLIRGLVRIGRIERA 76

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
            R+   MV  G+ P +++ N ++ G+C+      A + L  M   G  PD I+YNT+I  
Sbjct: 77  SRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRS 136

Query: 390 FVREENMD-----------------------------------KAFALVSKMENQGLVPD 414
                  D                                   +A  ++  M  +G  PD
Sbjct: 137 LFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPD 196

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
           ++TYN ++    ++G+  D+ LI++ ++  G+ P+  TY +L++   S
Sbjct: 197 LVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCS 244


>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 251/472 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  +   A   L EME  G  P +VTYN+LI+AY + G LEEA  L   M  KG
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP VFTY +L++G  K G+ D A +V  EM  +G  P+  T+N L+     +   +E  
Sbjct: 365 IKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMM 424

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F ++     +PDIV+++TL+ +F +NG   +    F+EMK AG V +   +  +I+ Y
Sbjct: 425 KVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAY 484

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A+ +   MLE G V D+ TYN +L  L R  +  +++ +  EM +    P+ 
Sbjct: 485 SRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNE 544

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++++L+H +     + +     + +   S++   V   TL+    K   + +  + + +
Sbjct: 545 LSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLE 604

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R ISP+  +   +++ Y     V +A  +   M      P+L + N+++  Y RS +
Sbjct: 605 LRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSEN 664

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K++E L +++ +G+ PD ISYNT+I  + R   M +A  + S+M++  LVPDV+TYN 
Sbjct: 665 FQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNT 724

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            +  +       ++  ++  MI++G  PD++TY ++++ +   +   EA  F
Sbjct: 725 FIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSF 776



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 246/501 (49%), Gaps = 37/501 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFL-EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           M  +GV PD  TYNTLI+  CR G L EEA  L   M  +G  P   TYN+L++   K  
Sbjct: 255 MRSRGVAPDLYTYNTLISC-CRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSR 313

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A +VL EM   G SP + TYN+L+    +   + EA ++  +M  +G+ PD+ +++
Sbjct: 314 RPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYT 373

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  F + G+ D A+  F EM++ G  P+   +  +I  +   G   E +K+ D++   
Sbjct: 374 TLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLC 433

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
            C  D+VT+NT+L    +  M ++   +F EM   G   +  TF TLI  + + G+ ++A
Sbjct: 434 NCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQA 493

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + ++  M +  + PD+ TYN ++    + G  E++ K+ A+M   +  PN +SY  L++ 
Sbjct: 494 MAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHA 553

Query: 320 YCSMGHV-----------------------------------TEAFRLWYEMVGKGIKPT 344
           Y +   +                                    E  R + E+  +GI P 
Sbjct: 554 YANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPD 613

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + + N ++  Y R    +KA E L+ M      P   +YN+L+  + R EN  K+  ++ 
Sbjct: 614 ITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILR 673

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++  +G+ PD I+YN ++  +CR GRM ++  I   M +  L PD  TY T I  + + +
Sbjct: 674 EVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADS 733

Query: 465 NLKEAFRFHDEMLQRGFVPDD 485
              EA      M+++G  PD 
Sbjct: 734 MFAEAIDVVRYMIKQGCKPDQ 754



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 258/556 (46%), Gaps = 73/556 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K  ++ SA   L  ++  GV+ D   Y  LINAY   G   +A  L N M   G
Sbjct: 164 IIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDG 223

Query: 61  LKPGVFTYNSLINGLCKKG-RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-SE 118
             P + TYN ++N   K G        +++ M   G++PD  TYNTL +  CR+ ++  E
Sbjct: 224 CNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTL-ISCCRRGSLYEE 282

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  +F +M   G  PD V+++ L+ +F ++ +   A+   +EM++ G  P +V Y  +I+
Sbjct: 283 AVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLIS 342

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            Y + G + EAL ++ +M+ KG   DV TY T+L+G  +A     A  +F EM   G  P
Sbjct: 343 AYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKP 402

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF  LI  H   G   + + +FD +   +  PDIVT+NTL+  F + G   + + ++
Sbjct: 403 NICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIF 462

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M          ++  LI+ Y   G   +A  ++  M+  G+ P L + N ++    R 
Sbjct: 463 KEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARG 522

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK--AFA--------------- 401
           G   ++++ L++M      P+ +SY++L++ +   + +++  AFA               
Sbjct: 523 GLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLL 582

Query: 402 ----LVS--------------KMENQGLVPDVITYNVILTGFCRQ---GRMHD------- 433
               LV+              ++  +G+ PD+ T N +L+ + R+    + H+       
Sbjct: 583 KTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHE 642

Query: 434 -------------------------SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
                                    SE IL  ++EKG+ PDR +Y T+I  +     +KE
Sbjct: 643 TRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKE 702

Query: 469 AFRFHDEMLQRGFVPD 484
           A R   EM     VPD
Sbjct: 703 ASRIFSEMKDSALVPD 718



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 35/263 (13%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR-------EGFLEEAFQ----- 51
           AL +    + ++  L EME     P+ ++Y++L++AY           F EE +      
Sbjct: 518 ALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVET 577

Query: 52  ---------LMNSMSG--------------KGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
                    L+NS S               +G+ P + T N++++   +K    +A E+L
Sbjct: 578 HAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEIL 637

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           + M +   +P   TYN+L+    R EN  ++EEI  E+  +G+ PD +S++T+I  + RN
Sbjct: 638 NFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRN 697

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G++  A   F EMK + LVPD V Y   I  Y  +    EA+ +   M+++GC  D  TY
Sbjct: 698 GRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTY 757

Query: 209 NTILNGLCRAKMLTEADDLFNEM 231
           N+I++  C+     EA+     +
Sbjct: 758 NSIVDWYCKLDQRHEANSFVKNL 780



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 76/161 (47%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++   +   +  A   L  M +    P   TYN+L+  Y R    +++ +++  +  KG
Sbjct: 620 MLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKG 679

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP   +YN++I   C+ GR   A  +  EM    L PD  TYNT +         +EA 
Sbjct: 680 MKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAI 739

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           ++   M ++G  PD  ++++++  + +  Q   A  + + +
Sbjct: 740 DVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNL 780


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 244/462 (52%), Gaps = 1/462 (0%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           GV P   TY+ L+ A+ +   +E    L+  M   G+KP V++Y   I  L +  R D A
Sbjct: 315 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 374

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             +L +M   G  PD  T+  L+   C    +S+A+++F +M +    PD V++ TL+  
Sbjct: 375 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 434

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F  NG     +  +  MK+ G   + V YT +I+  C+ G V EAL+M DEM +KG V +
Sbjct: 435 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 494

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             +YN++++G  +A    +A +LF  M   G  P+ YT    I+ + K G   KA+  ++
Sbjct: 495 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 554

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M  K I PD+V  N ++ G  K G +  A +++ ++ +  +SP+ I+Y ++I       
Sbjct: 555 LMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKAS 614

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
              EA +++Y+M+     P +++ N++I    ++G   +A     ++    ++P   +YN
Sbjct: 615 KFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYN 674

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TL+ G  RE  + +   L+ +M +    P++ITYN IL   C+ G ++D+  +L+ M  K
Sbjct: 675 TLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 734

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G  PD S+Y T+I G V +    EAF    +M ++  +PD A
Sbjct: 735 GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYA 775



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 253/520 (48%), Gaps = 37/520 (7%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           A  K   +++    L EME  GV P+  +Y   I    +    +EA++++  M  +G KP
Sbjct: 329 AFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKP 388

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVE-------------- 109
            V T+  LI  LC  GR   AK+V  +M +    PD  TY TLL +              
Sbjct: 389 DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW 448

Query: 110 ---------------------SCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
                                 C+   + EA E+F EM ++G+ P+  S+++LI  F + 
Sbjct: 449 NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 508

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
            +   AL  F+ M   G  P+   + + IN Y ++G  ++A++  + M  KG V DVV  
Sbjct: 509 DRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAG 568

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N +L GL ++  L  A  +F+E+   GV PD  T+T +I    K    ++A+ +F  M +
Sbjct: 569 NAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 628

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
            +  PD++  N+LID   K G  ++A +++  +    + P   +Y  L+ G    G V E
Sbjct: 629 NNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKE 688

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
              L  EM      P L++ NTI+   C++G  + A + L  M ++G  PD  SYNT+I 
Sbjct: 689 VMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIY 748

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS-ELILWRMIEKGLN 447
           G V+EE  ++AF++  +M+ + L+PD  T   IL  F + G M ++  +I    ++ G  
Sbjct: 749 GLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSK 807

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            DRS+  +L+ G + +  ++++  F + +   G   DD F
Sbjct: 808 TDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFF 847



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/556 (24%), Positives = 258/556 (46%), Gaps = 74/556 (13%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ L K  + D A     ++++  + P   TYNTL+    REG ++E   L+  M    
Sbjct: 641  LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 700

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P + TYN++++ LCK G  + A ++L  M   G  PD ++YNT++    ++E  +EA 
Sbjct: 701  YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAF 760

Query: 121  EIFCEMSRRGVAPDIVSFSTLI-------------------------------------G 143
             IFC+M ++ + PD  +  T++                                     G
Sbjct: 761  SIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEG 819

Query: 144  IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            I  + G +++++ +   + S+G+  D+     +I   C+    LEA ++  +    G  +
Sbjct: 820  ILKKAG-IEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSL 878

Query: 204  DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD------------------------ 239
                YN+++ GL    ++  A+ LF EM E G  PD                        
Sbjct: 879  KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 938

Query: 240  -----------FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
                       + T+ T+I G  K   + +A++L+  +  +   P   TY  L+DG  K 
Sbjct: 939  EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 998

Query: 289  GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
            G +E A  L+ +M+      N   Y IL+NG+   G+  +   L+ +MV +GI P + S 
Sbjct: 999  GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 1058

Query: 349  NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
              II   C++G  +    +  +++  G++PD I+YN LI+G  + + +++A +L ++M+ 
Sbjct: 1059 TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQK 1118

Query: 409  QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            +G+VP++ TYN ++    + G+  ++  +   ++ KG  P+  TY  LI G+    +   
Sbjct: 1119 KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDS 1178

Query: 469  AFRFHDEMLQRGFVPD 484
            A+  +  M+  G +P+
Sbjct: 1179 AYAAYGRMIVGGCLPN 1194



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 240/497 (48%), Gaps = 21/497 (4%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++  L K+ + + A    C+M +K + PD  T  T++ ++ + G ++EA  ++       
Sbjct: 746  VIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYF--- 801

Query: 61   LKPGVFT----YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
            L+PG  T     +SL+ G+ KK   +++ E  + +   G++ D      L+   C+++  
Sbjct: 802  LQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKA 861

Query: 117  SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             EA E+  +    GV+     +++LI        +D A   F EMK  G  PD   Y ++
Sbjct: 862  LEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLL 921

Query: 177  INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
            ++   ++  + E LK+++EM  KG     VTYNTI++GL +++ L +A DL+  ++ +G 
Sbjct: 922  LDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGF 981

Query: 237  FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
             P   T+  L+ G  K G +  A NLF+ M +   K +   YN L++G    G  EK   
Sbjct: 982  SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 1041

Query: 297  LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
            L+ DM+ + I+P+  SY I+I+  C  G + +    + +++  G++P L++ N +I G  
Sbjct: 1042 LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLG 1101

Query: 357  RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
            +S    +A    ++M  +G+ P+  +YN+LI    +     +A  +  ++  +G  P+V 
Sbjct: 1102 KSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVF 1161

Query: 417  TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR-------------STYTTLINGHVSQ 463
            TYN ++ G+   G    +     RMI  G  P+               T    I  H S 
Sbjct: 1162 TYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTDSSNCSSPEAVGTVRKQITSHRSY 1221

Query: 464  NNLKEAFRFHDEMLQRG 480
            +N KE        L +G
Sbjct: 1222 HNAKEPTTKAWRWLSKG 1238



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 218/484 (45%), Gaps = 38/484 (7%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           L+  + R G + E F +M       +K  V T+ ++  GL  +G    A   L  M + G
Sbjct: 224 LMRGHGRVGDMAEVFDVMQRQI---VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 280

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           +  +  TYN L+    +     EA E++  M   GV P + ++S L+  F +   ++  L
Sbjct: 281 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 340

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
              REM++ G+ P+   YTI I    +     EA ++  +M  +GC  DV+T+  ++  L
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTL----------------------------- 246
           C A  +++A D+F +M +    PD  T+ TL                             
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 460

Query: 247 ------IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
                 I   C+ G + +AL +FD M QK I P+  +YN+LI GF K      A +L+  
Sbjct: 461 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 520

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  ++ + IN Y   G   +A + +  M  KGI P +V+ N ++ G  +SG 
Sbjct: 521 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 580

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     ++ + GV PD+I+Y  +I    +    D+A  +   M     VPDV+  N 
Sbjct: 581 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 640

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++    + GR  ++  I +++ E  L P   TY TL+ G   +  +KE     +EM    
Sbjct: 641 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 700

Query: 481 FVPD 484
           + P+
Sbjct: 701 YPPN 704



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 188/443 (42%), Gaps = 39/443 (8%)

Query: 81  CDRAKEVLDEMLQMGLSP----DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
            D   E L+        P     TA+ N +L        + +  E+F  M R+ V  ++ 
Sbjct: 192 ADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVG 251

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +F+ + G     G L  A +    MK AG+V +   Y  ++    ++GF  EAL++   M
Sbjct: 252 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 311

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           +  G V  V TY+ ++    + + +     L  EM   GV P+ Y++T  I    +    
Sbjct: 312 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 371

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           ++A  +   M  +  KPD++T+  LI   C  G +  A  ++  M      P+ ++Y  L
Sbjct: 372 DEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 431

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ++ +   G       +W  M   G    +V+   +I   C+ G   +A E   +M  +G+
Sbjct: 432 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 491

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKME----------------------------- 407
            P+  SYN+LI+GF++ +    A  L   M+                             
Sbjct: 492 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 551

Query: 408 ------NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
                 ++G+VPDV+  N +L G  + GR+  ++ +   +   G++PD  TYT +I    
Sbjct: 552 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 611

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
             +   EA +   +M++   VPD
Sbjct: 612 KASKFDEAVKIFYDMIENNCVPD 634


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 253/521 (48%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCK +++D A     +MEQ    P    YNT+I  Y   G  +EA+ L+     KG
Sbjct: 172 MMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 231

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML---------------------------- 92
             P V  YN ++  L KKG+ D+A  + +EM                             
Sbjct: 232 CIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFK 291

Query: 93  ------QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
                 + GL P+  T N ++   C+ + + EA  IF  M  +  +PD  +F +LI    
Sbjct: 292 VRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLG 351

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + G++D A   +  M  A  +P+ V+YT +I  + +     +  KM  EM+  GC  D++
Sbjct: 352 KQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLM 411

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
             NT ++ + +A    +   LF E+  RG  PD  +++ LIH   K G   +   L+  M
Sbjct: 412 LLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAM 471

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
             +    D   YNT+IDGFCK G++ KA +L  +M +    P  ++YG +++G   +  +
Sbjct: 472 KDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRL 531

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA+ L+ E    GI+   V  +++I G+ + G   +A   + +M+ +G+ P+  ++N L
Sbjct: 532 DEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCL 591

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-G 445
           ++G V+ E +++A      M++    P+ ITY +++ G C+  R  +   + W+ ++K G
Sbjct: 592 LDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKV-RKFNKAFVFWQEMQKQG 650

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L P+  TYT +I+G     N+ +A    +     G +PD A
Sbjct: 651 LKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSA 691



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 239/469 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LCK   +++A      M++ G++P+  T N +I+  C+   L+EA  +   M  K 
Sbjct: 276 IIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV 335

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+ SLI+GL K+GR D A  + + ML     P+   Y +L+    + +   +  
Sbjct: 336 CSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGH 395

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM R G +PD++  +T +    + G+ ++    F E+K+ G +PD   Y+I+I+  
Sbjct: 396 KMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSL 455

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF  E  ++   M ++GCV+D   YNT+++G C++  + +A  L  EM   G  P  
Sbjct: 456 VKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTV 515

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +++ G  K   +++A  LF+      I+ + V Y++LIDGF KVG +++A  +  +
Sbjct: 516 VTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEE 575

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + ++PN  ++  L++G      + EA   +  M      P  ++   +I G C+   
Sbjct: 576 MMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRK 635

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M  +G+ P++I+Y  +I+G  +  N+ +A +L  +    G +PD  +YN 
Sbjct: 636 FNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNA 695

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++ G     R  D+  +      KG +    T   L++       L++A
Sbjct: 696 MIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 230/515 (44%), Gaps = 36/515 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V +  K  K+  A   L  M      P    Y TLI A    G  +    L N M   G
Sbjct: 32  LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +  V    +LI    ++GR D A  +LDEM       D   YN  +    +   +  A 
Sbjct: 92  YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 151

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F EM   G+ PD V++++++G+  +  +LD A+  F +M+    VP    Y  +I GY
Sbjct: 152 KFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGY 211

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G   EA  + +    KGC+  VV YN IL  L +     +A  +F EM +R   P+ 
Sbjct: 212 GSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNL 270

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I   CK GN+  A  + D M +  + P++ T N +ID  CK  ++++A  ++  
Sbjct: 271 PTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEG 330

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFR----------------------------- 331
           M  +  SP+  ++  LI+G    G V +A+R                             
Sbjct: 331 MDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDR 390

Query: 332 ------LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
                 ++ EM+  G  P L+  NT +    ++G+  K      ++ + G  PD+ SY+ 
Sbjct: 391 KEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSI 450

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+  V+     + + L   M++QG V D   YN ++ GFC+ G+++ +  +L  M   G
Sbjct: 451 LIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMG 510

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            +P   TY ++++G    + L EA+   +E    G
Sbjct: 511 HHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNG 545



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 193/403 (47%), Gaps = 1/403 (0%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D  +++L EM   G  P   T   L+    +   + EA ++   M      P   +++TL
Sbjct: 8   DYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTL 67

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           IG  S  G+ DR L  F +M+  G   +  L T +I  + R G V  AL + DEM     
Sbjct: 68  IGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTF 127

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             D+V YN  ++   +   +  A   F+EM   G+ PD  T+T+++   CK   +++A+ 
Sbjct: 128 DADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVE 187

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           +F+ M Q    P    YNT+I G+   G+ ++A  L     ++   P+ ++Y  ++    
Sbjct: 188 IFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLG 247

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G   +A R++ EM  +   P L + N II   C++G+   A +    M   G+ P+  
Sbjct: 248 KKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVR 306

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           + N +I+   + + +D+A ++   M+ +   PD  T+  ++ G  +QGR+ D+  I  RM
Sbjct: 307 TINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERM 366

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++    P+   YT+LI      +  ++  + + EM++ G  PD
Sbjct: 367 LDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPD 409



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 62/151 (41%)

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM   G  PT  +C  ++    +S    +A + L  M      P   +Y TLI       
Sbjct: 16  EMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVG 75

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
             D+  AL ++M+  G   +V     ++  F R+GR+  +  +L  M     + D   Y 
Sbjct: 76  ESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYN 135

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             I+       +  A++F  EM   G VPDD
Sbjct: 136 VCIDCFGKVGKVDMAWKFFHEMKANGLVPDD 166


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 209/404 (51%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P TV +  L+ +  +         L   M   G+ P V+T N LIN  C   R   A  V
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++G  PD  T+NTL+   C +  + EA  +F +    G  PD+V++ TL+    +
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    A+   R M      P+ + Y  II+  C++  V EA  +  EM+ KG   D+ T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN++++ LC          L NEM+   + P+   F+T++   CK+G +  A ++ D+M 
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++ ++PD+VTY  L+DG C   EM++A K++  M+ +   PN  SY ILINGYC +  + 
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L  +M  +G+    V+ NT+I G C  G    A     +MV+ G  PD ++Y  L+
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 469

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           +   +  ++ +A  L+  +E   L  D++ YN+ + G CR G +
Sbjct: 470 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGEL 513



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 207/375 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+ C   ++  A   L ++ + G  PD  T+NTLI   C EG + EA  L +   G+G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TY +L+NGLCK G    A  +L  M+Q    P+   YNT++   C+   ++EA 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM  +G++PDI ++++LI       +         EM ++ ++P+ V+++ +++  
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A  + D M+++G   DVVTY  +++G C    + EA  +F+ M+ +G  P+ 
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  LI+G+C+   M+KA+ L + M+ + +  D VTYNTLI G C VG ++ A  L+ +
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M++    P+ ++Y IL++  C   H+ EA  L   + G  +   ++  N  I G CR+G+
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512

Query: 361 ASKADEFLSKMVSEG 375
              A +  S +  +G
Sbjct: 513 LEAARDLFSNLSCQG 527



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 219/436 (50%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L++A    N M      P    +  L+  + K         +  +M   G+ PD  T N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+   C    +  A  +  ++ + G  PD  +F+TLI      G++  AL  F +    G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             PD V Y  ++NG C+ G    A+++   M++K C  +V+ YNTI++ LC+ + +TEA 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +LF+EM+ +G+ PD +T+ +LIH  C          L + M    I P++V ++T++D  
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK G +  A+ +   MI R + P+ ++Y  L++G+C    + EA +++  MV KG  P +
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            S N +I GYC+     KA   L +M  +G+  D+++YNTLI+G      +  A AL  +
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M   G +PD++TY ++L   C+   + ++ ++L  +    L+ D   Y   I+G      
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512

Query: 466 LKEAFRFHDEMLQRGF 481
           L+ A      +  +GF
Sbjct: 513 LEAARDLFSNLSCQGF 528



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 210/391 (53%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  G+ PD  T N LIN++C    L  AF ++  +   G +P   T+N+LI GLC +G
Sbjct: 137 QMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEG 196

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           +   A  + D+ +  G  PD  TY TL+   C+  N S A  +   M ++   P++++++
Sbjct: 197 KIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYN 256

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++ Q+  A   F EM + G+ PD   Y  +I+  C          + +EM+  
Sbjct: 257 TIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 316

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
             + +VV ++T+++ LC+  M+  A D+ + M++RGV PD  T+T L+ GHC    M++A
Sbjct: 317 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 376

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD M  K   P++ +YN LI+G+C++  M+KA  L   M  + +  + ++Y  LI+G
Sbjct: 377 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 436

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C +G +  A  L++EMV  G  P LV+   ++   C++   ++A   L  +    +D D
Sbjct: 437 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 496

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQG 410
            + YN  I+G  R   ++ A  L S +  QG
Sbjct: 497 ILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 197/369 (53%)

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           + +A   F  M      P  V F+ L+   ++       L    +M S G+ PD     I
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +IN +C    +  A  +  ++L+ GC  D  T+NT++ GLC    + EA  LF++ +  G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             PD  T+ TL++G CK GN + A+ L   M QK+ +P+++ YNT+ID  CK  ++ +A 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            L+++MI++ ISP+  +Y  LI+  C++        L  EMV   I P +V  +T++   
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+ G  + A + +  M+  GV+PD ++Y  L++G      MD+A  +   M ++G VP+V
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
            +YN+++ G+C+  RM  +  +L +M  +GL  D  TY TLI+G      L+ A     E
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 476 MLQRGFVPD 484
           M+  G +PD
Sbjct: 453 MVASGQIPD 461



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 65/132 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C+  ++D A   L +M  +G+  DTVTYNTLI+  C  G L+ A  L + M   G
Sbjct: 398 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 457

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY  L++ LCK      A  +L  +    L  D   YN  +   CR   +  A 
Sbjct: 458 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAAR 517

Query: 121 EIFCEMSRRGVA 132
           ++F  +S +G A
Sbjct: 518 DLFSNLSCQGFA 529


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 236/456 (51%), Gaps = 5/456 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L    + + A++   ++ QKG   D   YN LI  + R G L+ A ++   M  KG
Sbjct: 71  LIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG 130

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRK-ENMSEA 119
            +P  +TY  L+N L K GR   A+   D ML+ GL+P+  TYN LL+++ RK   +  A
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYN-LLMDAFRKVGQLDMA 189

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM RRG  P +V+++ L+      G++  A   F +M   G  PD+  Y+ ++NG
Sbjct: 190 LGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++G V EA K+  EM+++G  +D+V YN++L  L +A  +     L  EM  +G  PD
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            ++F T++    K    + A  +F  M +   KPD+++YN LID + + G+  +A ++  
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+     P   +Y  LI+   + G V EAF +  EM   G +P +V+ N ++    + G
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +  +A     +M  +GV+PD++SY   I+G   ++ +D+A  L   M+  G   D   Y 
Sbjct: 430 ENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYR 489

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           +++    R G   D+EL      E    P  S  T+
Sbjct: 490 ILIRAAHRAG---DTELEAQLKHESQFMPVESRLTS 522



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 242/478 (50%), Gaps = 4/478 (0%)

Query: 11  IDSAKMFLCEM--EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
           +D  +  L EM  E + + P+T+    LI AY R     +AF L N        P V  +
Sbjct: 11  LDPLETLLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
             LI+ L   G  +RA+ V  +++Q G   D   YN L+    R   +  A E+F EM  
Sbjct: 69  TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           +G  PD  ++  L+    + G++  A  +F  M   GL P+   Y ++++ + + G +  
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           AL +  EM  +G    VVTYN +L+ LC A  +  A  LF++M   G  PD YT++TL++
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G  K G + +A  +F  M  + +  D+V YN+L+    K G M++  KL  +M  +   P
Sbjct: 249 GLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHP 308

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           +  S+  +++          A  ++  MV  G KP L+S N +I  Y R GDA++A + L
Sbjct: 309 DAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQML 368

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +MV  G  P++ +YN+LI+    +  +D+AFA++ +ME  G  PDV+TYN ++    ++
Sbjct: 369 EEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKR 428

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G    +  +  +M +KG+ PD  +Y   I+G    + L EA     +M   G   D A
Sbjct: 429 GENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKA 486



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 231/475 (48%), Gaps = 1/475 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  + +K   A     + E     P    +  LI+     G  E A  +   +  KG
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +   F YN LI    + G+ D A E+  EM   G  PD  TY  L+    +   + EA 
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F  M  RG+ P+I +++ L+  F + GQLD AL  F EMK  G  P  V Y I+++  
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V  A K+  +M   GC  D  TY+T++NGL ++  + EA  +F EM++RGV  D 
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + +L+    K GNM++   L   M++K   PD  ++NT++D   K  + + A +++A 
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     P+ ISY ILI+ Y   G   +A ++  EMV  G  P   + N++I      G 
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A   L +M + G  PD ++YN L++   +     +A  L  +M+++G+ PD ++Y V
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN-GHVSQNNLKEAFRFHD 474
            + G     R+ ++ ++   M   G   D++ Y  LI   H + +   EA   H+
Sbjct: 456 RIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 211/410 (51%)

Query: 75  LCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPD 134
           L   G  D  + +L EM+  G      T   L+    R     +A ++F +      +P 
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPT 64

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           + +F+ LI I   +G+ +RA + ++++   G   D   Y ++I  + R+G +  A++M  
Sbjct: 65  VHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFR 124

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM  KG   D  TY  ++N L +A  + EA   F+ MLERG+ P+  T+  L+    K G
Sbjct: 125 EMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVG 184

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            ++ AL LF  M ++  +P +VTYN L+D  C  G +  A KL+  M     SP+  +Y 
Sbjct: 185 QLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYS 244

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            L+NG    G V EA +++ EMV +G+   LV+ N+++    ++G+  +  + + +M  +
Sbjct: 245 TLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRK 304

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G  PD+ S+NT+++   +    D A  + ++M   G  PD+I+YN+++  + R G    +
Sbjct: 305 GFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQA 364

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +L  M+E G  P+  TY +LI+   +   + EAF   +EM   G  PD
Sbjct: 365 RQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPD 414


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 227/472 (48%), Gaps = 2/472 (0%)

Query: 17  FLCEMEQKGVYPD--TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLING 74
           F  EM + G   D  T T   LI A+C  G +   ++L+N     GL PG  TYN LI G
Sbjct: 213 FYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAG 272

Query: 75  LCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPD 134
            C+        EVL  M+     P   TY  ++   C+ E   EA  +F ++  RG APD
Sbjct: 273 FCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPD 332

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
            V ++T+I      G    A   + EM   G+ P+   Y  +++G  ++G    A ++ +
Sbjct: 333 RVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYN 392

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM  KG     VT N I++ LC      EA ++F +M E G+  D  T+ +LI G CK+G
Sbjct: 393 EMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEG 452

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            +++ +NL + +  +  +P +  Y  LI   CK G+ E A +L  DM S+ + PN  +Y 
Sbjct: 453 KVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYD 512

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            +++G    G       L+ E   KG   T  +CN II   C  G + +A E   KM   
Sbjct: 513 TMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSET 572

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+  D+I+YN+LI GF +E  + K+  L++++  QGL P   +Y  ++   C+ G    +
Sbjct: 573 GIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESA 632

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + +   M+ KG+ P  +    LI+G   Q    E       ML+    P  A
Sbjct: 633 KRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKA 684



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 247/520 (47%), Gaps = 40/520 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +  AL     + +AKM     +  G  PD+ +    +   C  GF+EEA ++   +   G
Sbjct: 130 LFEALLDAKAVRAAKMV---RDIAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAG 186

Query: 61  LKPGVFTYNSLINGLCKKGR--------------------------------CD-----R 83
           ++  +   NS+++G  K G+                                CD     R
Sbjct: 187 IRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVAR 246

Query: 84  AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
             E+L++ L+ GL P   TYN L+   C+ +N +   E+   M  R   P I ++  +I 
Sbjct: 247 GYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIIN 306

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
              +N +   A   F ++K  G  PD V+YT +I+G C  G   EA K+  EM++KG   
Sbjct: 307 GLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQP 366

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           +  TYNT+L+G  ++     A +L+NEM  +G      T   +I   C  G  ++A  +F
Sbjct: 367 NAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVF 426

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M++  I+ D +TYN+LI GFCK G++++   L  +++++   P+   Y +LI   C  
Sbjct: 427 KKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKD 486

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G    A RL  +M  KG+ P   + +T++ G  +SGD     E  ++  ++G    + + 
Sbjct: 487 GDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATC 546

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N +I+        D+A  +  KM   G+  D ITYN ++ GFC++G++  S  +L  ++ 
Sbjct: 547 NKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVA 606

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           +GL P  S+Y +LI       + + A R   +M+ +G  P
Sbjct: 607 QGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEP 646



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 229/456 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C   ++      L +  + G+ P   TYN LI  +C+        +++++M  + 
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P ++TY  +INGLCK   C  A  V +++   G +PD   Y T++   C   +  EA 
Sbjct: 294 HLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEAR 353

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +++ EM  +G+ P+  +++T++    ++G  +RA   + EM + G     V    II+  
Sbjct: 354 KLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISEL 413

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G   EA ++  +M E G   D +TYN+++ G C+   + E  +L NE++ +   P  
Sbjct: 414 CSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSV 473

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  LI   CKDG+   A  L   M+ K + P+  TY+T++ G  K G+ E   +L+ +
Sbjct: 474 SLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNE 533

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
             ++       +   +I+  CS G   EA  ++ +M   GIK   ++ N++I+G+C+ G 
Sbjct: 534 TCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGK 593

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K+   L+++V++G+ P + SY +LI    +  + + A  L   M ++G+ P       
Sbjct: 594 VGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREH 653

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           +++G C+QGR  +    L  M+E  + P ++ +  L
Sbjct: 654 LISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDL 689



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 205/394 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ +   A     +++ +G  PD V Y T+I+  C  G   EA +L   M  KG
Sbjct: 304 IINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKG 363

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  +TYN++++G  K G  +RA E+ +EM   G    T T N ++ E C +    EA 
Sbjct: 364 MQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAF 423

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F +MS  G+  D +++++LI  F + G++D  +    E+ +    P   LY ++I   
Sbjct: 424 EVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKS 483

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G    A ++  +M  KG   +  TY+T+L+G  ++       +L+NE   +G     
Sbjct: 484 CKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTT 543

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T   +I   C  G  ++A  +F  M++  IK D +TYN+LI GFCK G++ K+  L  +
Sbjct: 544 ATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNE 603

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++++ + P+  SY  LI   C  G    A RLW +MV KGI+P       +I G C+ G 
Sbjct: 604 LVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGR 663

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           A++  + L  M+   + P   ++  L    ++ E
Sbjct: 664 ATEGMDRLMGMLENKIKPKKAAFEDLAECLIQSE 697


>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
 gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
          Length = 821

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 259/500 (51%), Gaps = 17/500 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ K++ A+  L    + G  PD   Y+ LI+++C+ G LE+A+  +  M   G
Sbjct: 305 VIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHG 364

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++       SL+  L K G          +   +GL  D   YN  +   C+  NM+EA 
Sbjct: 365 IEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAV 424

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G+ PD + ++ LI  +   G+ + A   F +M  A + PD V Y I+ +GY
Sbjct: 425 KLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGY 484

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            RNG V++   + + M+++G   + +TY   + G CR   L+EA+ LFN + E+G+    
Sbjct: 485 SRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNID 544

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +++++ G+   G  + A  LF  + ++    D ++ + LI+G C+  ++++A+ + + 
Sbjct: 545 VLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSM 604

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ + + P+ ISY  LI+ YC    +  A   +++MV +G+   + +   ++ GYC+ G 
Sbjct: 605 MLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGLSD-VTAYTILMNGYCKVGQ 663

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD----------------KAFALVS 404
             +A E   +MV+ G+ PD ++Y  L++G ++E                    K   L+S
Sbjct: 664 LQEACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLS 723

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            M+   + PDV  Y V++ G C+   + ++  +   M+ KGL PD   YTTLING+ SQ 
Sbjct: 724 SMKEMEIEPDVTCYTVLIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQG 783

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
            + +A     EM+ +G  PD
Sbjct: 784 EIAKAEDLFQEMIDKGMKPD 803



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 218/411 (53%), Gaps = 17/411 (4%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++A CK   ++ A   L EM   G+ PD + Y  LIN YC +G  E A+Q+   M    +
Sbjct: 411 MDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANI 470

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP V TYN L +G  + G   +  ++L+ M+  GL P++ TY   +   CR  N+SEAE 
Sbjct: 471 KPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEV 530

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F  +  +G+    V +S+++  +  +G  D A M F  +   G + D++  + +ING C
Sbjct: 531 LFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLC 590

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R+  V EA  +   MLEK  V  V++Y+ +++  C+++ +  A   F++M+ERG+  D  
Sbjct: 591 RDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGL-SDVT 649

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME--------- 292
            +T L++G+CK G + +A  LF  M    IKPD+V Y  L+DG  K    +         
Sbjct: 650 AYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKER 709

Query: 293 -------KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
                  K   L + M   +I P+   Y +LI G C   ++ EA  L+ EM+ KG+ P +
Sbjct: 710 RTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYLEEARGLFDEMLAKGLTPDV 769

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
            +  T+I GYC  G+ +KA++   +M+ +G+ PD +S++ L    +R   +
Sbjct: 770 DAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVLHQRTLRHRKV 820



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 238/470 (50%), Gaps = 7/470 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL------MN 54
           +  +L + +K D A      M + GV  D   Y++ I   C  G  + A+ +      + 
Sbjct: 229 VTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMVRRYAVLQ 288

Query: 55  SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
            +S + +    F YN +I+GLCK+ + + A++VL+   + G +PD   Y+ L+   C+  
Sbjct: 289 EISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMG 348

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
           N+ +A     +M   G+  +     +L+    + G +   +++F++ +  GL  D VLY 
Sbjct: 349 NLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYN 408

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           + ++ YC+ G + EA+K+ +EM+  G V D + Y  ++NG C       A  +F +ML+ 
Sbjct: 409 VAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKA 468

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            + PD  T+  L  G+ ++G + K  +L + M  + ++P+ +TY   I GFC+ G + +A
Sbjct: 469 NIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEA 528

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L+  +  + I    + Y  ++ GY   G    A+ L+  +  +G     +SC+ +I G
Sbjct: 529 EVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLING 588

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            CR     +A    S M+ + V P  ISY+ LI+ + +  +M  A      M  +GL  D
Sbjct: 589 LCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGL-SD 647

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           V  Y +++ G+C+ G++ ++  +  +M+  G+ PD   YT L++GH+ + 
Sbjct: 648 VTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKET 697



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 227/497 (45%), Gaps = 77/497 (15%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD------ 82
           D  + N +  +  +    +EAF++   M   G+K  V  Y+S I GLC  G+ D      
Sbjct: 222 DAQSLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMV 281

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           R   VL E+ Q  +  +   YN ++   C++  + EAE++    +R G  PD+  +S L 
Sbjct: 282 RRYAVLQEISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYL- 340

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
                                             I+ +C+ G + +A    ++M+  G  
Sbjct: 341 ----------------------------------IHSHCKMGNLEKAWYHIEDMVSHGIE 366

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           ++     ++L  L +  M++E    F +  + G+  D   +   +  +CK GNMN+A+ L
Sbjct: 367 INCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVKL 426

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            + M    + PD + Y  LI+G+C  GE E A +++  M+   I P+ ++Y IL +GY  
Sbjct: 427 LNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSR 486

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD----- 377
            G V + F L   M+ +G++P  ++    I G+CR G+ S+A+   + +  +G+D     
Sbjct: 487 NGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVL 546

Query: 378 ------------------------------PDSISYNTLINGFVREENMDKAFALVSKME 407
                                          D +S + LING  R+E + +A  + S M 
Sbjct: 547 YSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMML 606

Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
            + +VP VI+Y+ +++ +C+   M ++ L    M+E+GL+ D + YT L+NG+     L+
Sbjct: 607 EKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGLS-DVTAYTILMNGYCKVGQLQ 665

Query: 468 EAFRFHDEMLQRGFVPD 484
           EA     +M+  G  PD
Sbjct: 666 EACELFVQMVNLGIKPD 682



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 205/485 (42%), Gaps = 64/485 (13%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           N LI AY      +E   +   +   G  P ++  N L+  + +           D M  
Sbjct: 157 NCLIKAYTTCHDAQETVDMFCHLCRLGFVPTLWACNFLLKFVSQSSDSHMVVAAYDRMKC 216

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
             L+ D  + N +     +     EA  ++  M   GV  D+  +S+ I      G+ D 
Sbjct: 217 FQLTLDAQSLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDL 276

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A    R             Y ++                  E+ ++   ++   YN +++
Sbjct: 277 AYNMVRR------------YAVL-----------------QEISQERVPIEAFAYNMVID 307

Query: 214 GLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP 273
           GLC+   L EA+ +       G  PD Y ++ LIH HCK GN+ KA    + M    I+ 
Sbjct: 308 GLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHGIEI 367

Query: 274 -----------------------------------DIVTYNTLIDGFCKVGEMEKANKLW 298
                                              D V YN  +D +CK+G M +A KL 
Sbjct: 368 NCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVKLL 427

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M++  + P+ I Y  LINGYC  G    A++++ +M+   IKP +V+ N +  GY R+
Sbjct: 428 NEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSRN 487

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   K  + L  M+ +G++P+S++Y   I GF R  N+ +A  L + +E +G+    + Y
Sbjct: 488 GLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLY 547

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           + ++ G+   G    + ++  R+ ++G   D  + + LING      ++EA      ML+
Sbjct: 548 SSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMMLE 607

Query: 479 RGFVP 483
           +  VP
Sbjct: 608 KNVVP 612


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 205/365 (56%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           +K  YPD +TY  LI A C E  + +A +L++ M  +G KP V TYN L+NG+CK+GR D
Sbjct: 9   EKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLD 68

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A + L+ M   G  P+  T+N +L   C      +AE++  EM R+G +P +V+F+ LI
Sbjct: 69  EAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILI 128

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               R G L RA+    +M + G  P+++ Y  +++G+C+   +  A++  + M+ +GC 
Sbjct: 129 NFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCY 188

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            D+VTYNT+L  LC+   +  A +L N++  +G  P   T+ T+I G  K G  ++A+ L
Sbjct: 189 PDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVEL 248

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
              M  K +KPD++TY++LI G  + G++E+A K + D+    + PN  +Y  ++ G C 
Sbjct: 249 LHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCK 308

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
                 A      M+ KG KPT VS   +I+G    G A +A E L+++ S GV   S +
Sbjct: 309 AQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSA 368

Query: 383 YNTLI 387
              ++
Sbjct: 369 EQVVV 373



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 207/372 (55%)

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           EVLD  L+    PD  TY  L+  +C +  + +A ++  EM  RG  PD+V+++ L+   
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            + G+LD A+ +   M S G  P+ + + II+   C  G  ++A K+  EM+ KGC   V
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT+N ++N LCR  +L  A D+  +M   G  P+  ++  L+HG CK+  M++A+   +I
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  +   PDIVTYNT++   CK G+++ A +L   + S+  SP  I+Y  +I+G   +G 
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +A  L +EM GKG+KP +++ +++I G  R G   +A +F   +   GV P++ +YN+
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           ++ G  + +  D+A   ++ M ++G  P  ++Y +++ G   +G   ++  +L  +  +G
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361

Query: 446 LNPDRSTYTTLI 457
           +    S    ++
Sbjct: 362 VVKKSSAEQVVV 373



 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 195/341 (57%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A C +  +  A   L EM  +G  PD VTYN L+N  C+EG L+EA + +NSM   G
Sbjct: 22  LIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYG 81

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V T+N ++  +C  GR   A+++L EM++ G SP   T+N L+   CRK  +  A 
Sbjct: 82  SQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAI 141

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  +M   G  P+ +S++ L+  F +  ++DRA+ Y   M S G  PD V Y  ++   
Sbjct: 142 DILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTAL 201

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G V  A+++ +++  KGC   ++TYNT+++GL +     +A +L +EM  +G+ PD 
Sbjct: 202 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDV 261

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+++LI G  ++G + +A+  F  +    +KP+  TYN+++ G CK  + ++A    A 
Sbjct: 262 ITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAY 321

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           MIS+   P  +SY ILI G  + G   EA  L  E+  +G+
Sbjct: 322 MISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 186/350 (53%)

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
           PD+++++ LI        + +A+    EM S G  PD V Y +++NG C+ G + EA+K 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
            + M   G   +V+T+N IL  +C      +A+ L  EM+ +G  P   TF  LI+  C+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            G + +A+++ + M      P+ ++YN L+ GFCK  +M++A +    M+SR   P+ ++
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           Y  ++   C  G V  A  L  ++  KG  P L++ NT+I G  + G   +A E L +M 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 373 SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
            +G+ PD I+Y++LI G  RE  +++A      +E  G+ P+  TYN I+ G C+  +  
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            +   L  MI KG  P   +YT LI G  ++   KEA    +E+  RG V
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 194/360 (53%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P V TY  LI   C +    +A ++LDEM   G  PD  TYN L+   C++  + EA + 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
              M   G  P++++ + ++      G+   A     EM   G  P  V + I+IN  CR
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
            G +  A+ + ++M   GC  + ++YN +L+G C+ K +  A      M+ RG +PD  T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           + T++   CKDG ++ A+ L + ++ K   P ++TYNT+IDG  KVG+ ++A +L  +M 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
            + + P+ I+Y  LI G    G V EA + ++++ G G+KP   + N+I+ G C++    
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +A +FL+ M+S+G  P  +SY  LI G   E    +A  L++++ ++G+V       V++
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 148/259 (57%)

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           ++ +  LE+  +PD  T+T LI   C +  + +A+ L D M  +  KPD+VTYN L++G 
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK G +++A K    M S    PN I++ I++   CS G   +A +L  EMV KG  P++
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+ N +I   CR G   +A + L KM + G  P+S+SYN L++GF +E+ MD+A   +  
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M ++G  PD++TYN +LT  C+ G++  +  +L ++  KG +P   TY T+I+G      
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 466 LKEAFRFHDEMLQRGFVPD 484
             +A     EM  +G  PD
Sbjct: 242 TDQAVELLHEMRGKGLKPD 260



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 162/295 (54%)

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           +++ D  LEK C  DV+TY  ++   C    + +A  L +EM  RG  PD  T+  L++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK+G +++A+   + M     +P+++T+N ++   C  G    A KL  +M+ +  SP+
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            +++ ILIN  C  G +  A  +  +M   G  P  +S N ++ G+C+     +A ++L 
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            MVS G  PD ++YNT++    ++  +D A  L++++ ++G  P +ITYN ++ G  + G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   +  +L  M  KGL PD  TY++LI G   +  ++EA +F  ++   G  P+
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPN 295



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 122/202 (60%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+ K+D A  +L  M  +G YPD VTYNT++ A C++G ++ A +L+N +S KG
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN++I+GL K G+ D+A E+L EM   GL PD  TY++L+    R+  + EA 
Sbjct: 222 CSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAI 281

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F ++   GV P+  ++++++    +  Q DRA+ +   M S G  P  V YTI+I G 
Sbjct: 282 KFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGI 341

Query: 181 CRNGFVLEALKMRDEMLEKGCV 202
              G   EAL++ +E+  +G V
Sbjct: 342 ANEGLAKEALELLNELCSRGVV 363



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 99/177 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ ALCKD K+D+A   L ++  KG  P  +TYNT+I+   + G  ++A +L++ M GKG
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKG 256

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP V TY+SLI GL ++G+ + A +   ++   G+ P+  TYN+++   C+ +    A 
Sbjct: 257 LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAI 316

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +    M  +G  P  VS++ LI   +  G    AL    E+ S G+V  +    +++
Sbjct: 317 DFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 259/475 (54%), Gaps = 13/475 (2%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL  +  +G  P   ++N++++  C+ G ++ A  +++SM   G +P V +YNSLI+G C
Sbjct: 43  FLAYLVSRGYAPHRSSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHC 102

Query: 77  KKGRCDRAKEVLDEM-LQMGLS--PDTATYNTLLVESCRKENMSEAEEIFCEMS--RRGV 131
           + G    A  VL+ +    G +  PD  ++NTL     +   M   +E+F  M    +  
Sbjct: 103 RNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSK---MKMLDEVFVYMGVMLKCC 159

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
           +P++V++ST I +F ++G+L  AL  F  MK   L P+ V +T +I+GYC+ G +   + 
Sbjct: 160 SPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVS 219

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + +EM      ++VVTY  +++G C+   +  A  ++  MLE  V P+   +TT+I+G  
Sbjct: 220 LYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFF 279

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           + G+ + A+     M  + ++ DI  Y  +I G C +G++++A ++  DM    + P+ +
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMM 339

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            +  ++N Y   G +  A  ++++++ +G +P +V+ +T+I G  ++G   +A   +S  
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA---ISYF 396

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            +E    + + Y  LI+   +EE+  +   L SK+   GLVPD   Y   + G C+QG +
Sbjct: 397 CTE--KANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            D+  +  +M+++GL  D   YTTLI G  S+  + EA +  DEML+ G  PD A
Sbjct: 455 VDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSA 509



 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 231/472 (48%), Gaps = 34/472 (7%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           ++EA Q ++ +      P   T N  I+ L        + + L  ++  G +P  +++N+
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNS 61

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA- 164
           ++   C+   +  A +I   M R G  PD++S+++LI    RNG +  A +    ++++ 
Sbjct: 62  VVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASY 121

Query: 165 GLV--PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
           G    PD V +  + NG+ +   + E       ML K C  +VVTY+T ++  C++  L 
Sbjct: 122 GFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDMFCKSGELK 180

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
            A   FN M    +FP+  TFT LI G+CK G++   ++L++ M +  +  ++VTY  LI
Sbjct: 181 LALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALI 240

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           DGFCK GEM++A  ++  M+  ++ PN + Y  +ING+   G    A +   +M+ +G++
Sbjct: 241 DGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
             + +   II G C  G   +A E +  M    + PD + + T++N + +   M  A  +
Sbjct: 301 LDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNM 360

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDS---------------------------- 434
             K+  +G  PDV+  + ++ G  + G++H++                            
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDALCKEEDFI 420

Query: 435 --ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             E +  ++ E GL PD+  YT+ I G   Q NL +AF+   +M+Q G   D
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELD 472



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 231/449 (51%), Gaps = 9/449 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVY---PDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           +++  C++  I SA + L  +     +   PD V++NTL N + +   L+E F  M  M 
Sbjct: 97  LIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVML 156

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
            K   P V TY++ I+  CK G    A +  + M +  L P+  T+  L+   C+  ++ 
Sbjct: 157 -KCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLE 215

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
               ++ EM R  ++ ++V+++ LI  F + G++ RA   +  M    + P++++YT II
Sbjct: 216 VVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTII 275

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG+ + G    A+K   +ML +G  +D+  Y  I++GLC    L EA ++  +M +  + 
Sbjct: 276 NGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLV 335

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD   FTT+++ + K G M  A+N++  + ++  +PD+V  +T+IDG  K G++ +A   
Sbjct: 336 PDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISY 395

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +          N + Y +LI+  C      E  RL+ ++   G+ P      + I G C+
Sbjct: 396 FCTE-----KANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 450

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G+   A +  +KMV EG++ D  +Y TLI G   +  M +A  +  +M   G+ PD   
Sbjct: 451 QGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAV 510

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGL 446
           +++++  + ++G M  +  +L  M  +GL
Sbjct: 511 FDLLIRAYEKEGNMTTASDLLLDMQTRGL 539



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 164/307 (53%), Gaps = 5/307 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK  ++  A      M +  V P+++ Y T+IN + + G  + A + +  M  +G
Sbjct: 239 LIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQG 298

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  +  Y  +I+GLC  G+   A E++++M +  L PD   + T++    +   M  A 
Sbjct: 299 MRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAV 358

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++ ++  RG  PD+V+ ST+I   ++NGQL  A+ YF   K+     ++V+YT++I+  
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKA-----NDVMYTVLIDAL 413

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+    +E  ++  ++ E G V D   Y + + GLC+   L +A  L  +M++ G+  D 
Sbjct: 414 CKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDL 473

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           + +TTLI+G    G M +A  +FD M +  + PD   ++ LI  + K G M  A+ L  D
Sbjct: 474 FAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLD 533

Query: 301 MISRKIS 307
           M +R ++
Sbjct: 534 MQTRGLA 540


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 152/460 (33%), Positives = 232/460 (50%), Gaps = 26/460 (5%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK------ 77
           K V    V  +T I AY        A Q+ N M    LKP + T N+LIN L +      
Sbjct: 129 KKVQSLRVILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPS 188

Query: 78  ----------------KGRCDRAKEVLDEMLQMGLSPDTATYNTLL--VESCRKENMSEA 119
                           K +   A  ++ +M      PD A+YNT+L  +  CR     ++
Sbjct: 189 VCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQS 248

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +   E+   G+ P  ++++T+I  + R GQ+++A  +  +M      PD     I++ G
Sbjct: 249 IDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRG 308

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C  G +  ALK+ +  + KG  +D VTYNTI++GLC+     EA DL  EM E+ + PD
Sbjct: 309 LCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD 368

Query: 240 FYTFTTLIHGHC-KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
            YT+  ++      +G + KA    + M +KS KPD+ T N L+ G C  G ++ A KL+
Sbjct: 369 CYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLF 428

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSCNTIIKGYCR 357
              IS+  + + ++Y  +I+G C  G   EAF L  EM  K G+ P   + NTII GYCR
Sbjct: 429 NTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCR 488

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   KA +F +KMV +   PD  + N L+ G  RE  + KA  L +   ++G   D +T
Sbjct: 489 EGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVT 548

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           YN I++G C++GR  ++  +L  M EK L PD  TY  ++
Sbjct: 549 YNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAIL 588



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 150/443 (33%), Positives = 230/443 (51%), Gaps = 26/443 (5%)

Query: 21  MEQKGVYPDTVTYNTLINAYCR----------------------EGFLEEAFQLMNSMSG 58
           M++  + P+ +T NTLINA  R                      +  L EA  L+  M  
Sbjct: 161 MKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKD 220

Query: 59  KGLKPGVFTYNSLIN--GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
               P   +YN++++   LC+ G+ D++ + L+E+L+ GL P   TYNT++   CR+  +
Sbjct: 221 FSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQV 280

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A +   +M  +   PD+ + + L+      G LD AL  F    S G   D V Y  I
Sbjct: 281 EKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTI 340

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERG 235
           I+G C+ G   EA  +  EM EK    D  TYN IL  L  A+  + +A    N+M+E+ 
Sbjct: 341 ISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKS 400

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             PD +T   L+ G C +G ++ AL LF+    K    D VTYNT+I G CK G  E+A 
Sbjct: 401 FKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAF 460

Query: 296 KLWADMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            L A+M  +  + P+  +Y  +I GYC  G V +AF+   +MV K  KP L +CN +++G
Sbjct: 461 DLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRG 520

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            CR G   KA +  +  +S+G   D+++YNT+I+G  +E   ++AF L+++M+ + L PD
Sbjct: 521 LCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPD 580

Query: 415 VITYNVILTGFCRQGRMHDSELI 437
             TYN IL      GRM   E +
Sbjct: 581 CYTYNAILCALADAGRMEAEEFM 603



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/371 (36%), Positives = 210/371 (56%), Gaps = 7/371 (1%)

Query: 5   LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
           LC+  K D +   L E+ + G+ P  +TYNT+I+ YCREG +E+AFQ  N M  K  KP 
Sbjct: 239 LCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPD 298

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           +FT N L+ GLC +G  D A ++ +  +  G + D  TYNT++   C++    EA ++  
Sbjct: 299 LFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLA 358

Query: 125 EMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
           EM  + + PD  +++ ++  +    GQ+++A  +  +M      PD     I++ G C  
Sbjct: 359 EMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTE 418

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER-GVFPDFYT 242
           G +  ALK+ +  + KG  +D VTYNTI++GLC+     EA DL  EM E+ G+ PD  T
Sbjct: 419 GMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTT 478

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           + T+I G+C++G + KA    + M +KS KPD+ T N L+ G C+ G + KA KL+   I
Sbjct: 479 YNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWI 538

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           S+  + + ++Y  +I+G C  G   EAF L  EM  K + P   + N I+   C   DA 
Sbjct: 539 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAIL---CALADAG 595

Query: 363 K--ADEFLSKM 371
           +  A+EF+SK+
Sbjct: 596 RMEAEEFMSKI 606



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 170/354 (48%), Gaps = 17/354 (4%)

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           V   T IG +    +   A   F  MK   L P+ +    +IN             +R  
Sbjct: 136 VILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINAL-----------VRYP 184

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH--GHCKD 253
                C+   +  N I  G+     L+EA  L  +M +   FPD  ++ T++     C+ 
Sbjct: 185 SKPSVCLSKAIFTNVIKFGV--KNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRS 242

Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISY 313
           G  +++++  + + +  + P  +TYNT+I G+C+ G++EKA +    M+ +   P+  + 
Sbjct: 243 GKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTC 302

Query: 314 GILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS 373
            IL+ G C+ G +  A +L+   + KG     V+ NTII G C+ G   +A + L++M  
Sbjct: 303 NILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEE 362

Query: 374 EGVDPDSISYNTLINGFVREE-NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMH 432
           + + PD  +YN ++      E  ++KAF   +KM  +   PD+ T N++L G C +G + 
Sbjct: 363 KKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLD 422

Query: 433 DSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR-GFVPDD 485
           ++  +    I KG   D  TY T+I+G   +   +EAF    EM ++ G VPD 
Sbjct: 423 NALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQ 476



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC++  +  A         KG   D VTYNT+I+  C+EG  EEAF L+  M  K 
Sbjct: 517 LLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKK 576

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           L P  +TYN+++  L   GR + A+E + ++
Sbjct: 577 LGPDCYTYNAILCALADAGRME-AEEFMSKI 606


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 128/375 (34%), Positives = 214/375 (57%), Gaps = 3/375 (0%)

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV 171
           R   +  +  ++ E+   G  P I  F+ L+  F + G +  A + F E+   GL P  V
Sbjct: 225 RPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVV 284

Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
            +  +I+G C++G V E  +++  M  +G   DV T++ ++NGLC+   L E   LF+EM
Sbjct: 285 SFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 344

Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
             RG+ P+  TFTTLI G CK G ++ AL  F +M  + ++PD+VTYN LI+G CKVG++
Sbjct: 345 CGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 404

Query: 292 EKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTI 351
           ++A +L  +M +  + P+ I++  LI+G C  G +  A  +   MV +GI+   V+   +
Sbjct: 405 KEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTAL 464

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I G CR G    A   L+ M+S G  PD  +Y  +I+ F ++ ++   F L+ +M++ G 
Sbjct: 465 ISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGH 524

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           VP V+TYN ++ G C+QG+M +++++L  M+  G+ P+  TY  L++GH    +  +   
Sbjct: 525 VPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDI 584

Query: 472 FHDEMLQRGFVPDDA 486
           F+ E   +G V D A
Sbjct: 585 FNSE---KGLVTDYA 596



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 114/324 (35%), Positives = 190/324 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   + +A++   E+ ++G+ P  V++NTLI+  C+ G +EE F+L   M  +G
Sbjct: 254 LMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEG 313

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P VFT+++LINGLCK+GR D    + DEM   GL P+  T+ TL+   C+   +  A 
Sbjct: 314 VCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLAL 373

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F  M  +GV PD+V+++ LI    + G L  A     EM ++GL PD + +T +I+G 
Sbjct: 374 KNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGC 433

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G +  AL+++  M+E+G  +D V +  +++GLCR   + +A  +  +ML  G  PD 
Sbjct: 434 CKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDD 493

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I   CK G++     L   M      P +VTYN L++G CK G+M+ A  L   
Sbjct: 494 PTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDA 553

Query: 301 MISRKISPNYISYGILINGYCSMG 324
           M++  ++PN I+Y IL++G+   G
Sbjct: 554 MLNVGVAPNDITYNILLDGHSKHG 577



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 201/379 (53%), Gaps = 3/379 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           +I+ +     E+   G  P    +N L++ +C+ G +  A  + + +  +GL+P V ++N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           +LI+G CK G  +    +   M   G+ PD  T++ L+   C++  + E   +F EM  R
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G+ P+ V+F+TLI    + G++D AL  F+ M + G+ PD V Y  +ING C+ G + EA
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            ++ +EM   G   D +T+ T+++G C+   +  A ++   M+E G+  D   FT LI G
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C++G ++ A  +   M     KPD  TY  +ID FCK G+++   KL  +M S    P 
Sbjct: 468 LCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG 527

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y  L+NG C  G +  A  L   M+  G+ P  ++ N ++ G+ + G +   D F S
Sbjct: 528 VVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNS 587

Query: 370 KMVSEGVDPDSISYNTLIN 388
           +   +G+  D  SY  L+N
Sbjct: 588 E---KGLVTDYASYTALVN 603



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/283 (35%), Positives = 161/283 (56%), Gaps = 3/283 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK+ ++D   +   EM  +G+ P+ VT+ TLI+  C+ G ++ A +    M  +G
Sbjct: 324 LINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQG 383

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TYN+LINGLCK G    A+ +++EM   GL PD  T+ TL+   C+  +M  A 
Sbjct: 384 VRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESAL 443

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI   M   G+  D V+F+ LI    R G++  A     +M SAG  PD+  YT++I+ +
Sbjct: 444 EIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCF 503

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V    K+  EM   G V  VVTYN ++NGLC+   +  A  L + ML  GV P+ 
Sbjct: 504 CKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPND 563

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
            T+  L+ GH K G+ +  +++F+  ++K +  D  +Y  L++
Sbjct: 564 ITYNILLDGHSKHGS-SVDVDIFN--SEKGLVTDYASYTALVN 603


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 232/430 (53%), Gaps = 10/430 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L +   I      L EME++ + P  VT+  L+N  C+   ++EA Q+ + + GKG
Sbjct: 287 LLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKG 346

Query: 61  ------LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL--SPDTATYNTLLVESCR 112
                 ++P V  +N+LI+GLCK G+ +    +L+EM +MG    P+T TYN L+    +
Sbjct: 347 GSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEM-KMGNINRPNTVTYNCLIDGFFK 405

Query: 113 KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
             N   A E+F +M+  GV P++++ +TL+    ++G++ RA+ +F EMK  GL  +   
Sbjct: 406 AGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAAT 465

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           YT +I+ +C    +  A++  +EML  GC  D V Y ++++GLC A  + +A  + +++ 
Sbjct: 466 YTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLK 525

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
             G   D   +  LI G CK   + +   L   M +  +KPD +TYNTLI    K G+  
Sbjct: 526 LAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFA 585

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG-IKPTLVSCNTI 351
            A+K+   MI   + P+ ++YG +I+ YCS  +V E  +++ EM     + P  V  N +
Sbjct: 586 TASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNIL 645

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           I   CR+ D  +A   +  M  + V P++ +YN ++ G   ++ + KAF L+ +M  +  
Sbjct: 646 IDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEAC 705

Query: 412 VPDVITYNVI 421
            PD IT  V+
Sbjct: 706 RPDYITMEVL 715



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 239/476 (50%), Gaps = 8/476 (1%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            + ++ ++GV+PD      L+   C +     A+++++ +   G      + N+L+  L 
Sbjct: 233 LVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLG 292

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR------G 130
           +     R  E+L EM +  + P   T+  L+   C+   + EA ++F  +  +      G
Sbjct: 293 RGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVG 352

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL-VPDNVLYTIIINGYCRNGFVLEA 189
           V PD+V F+TLI    + G+ +  L    EMK   +  P+ V Y  +I+G+ + G    A
Sbjct: 353 VEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRA 412

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
            ++  +M E+G   +V+T NT+++GLC+   +  A + FNEM  +G+  +  T+T LI  
Sbjct: 413 HELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISA 472

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C   N+N+A+  F+ M      PD V Y +LI G C  G M  A+ + + +     S +
Sbjct: 473 FCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLD 532

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
              Y +LI+G+C    +   + L  EM   G+KP  ++ NT+I    ++GD + A + + 
Sbjct: 533 RSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVME 592

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM-ENQGLVPDVITYNVILTGFCRQ 428
           KM+ EG+ P  ++Y  +I+ +  ++N+D+   +  +M     + P+ + YN+++   CR 
Sbjct: 593 KMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRN 652

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +  +  ++  M  K + P+ +TY  ++ G   +  L +AF   D M++    PD
Sbjct: 653 NDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPD 708



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 227/465 (48%), Gaps = 10/465 (2%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +V  LC D K   A ++  C M   G   D  + N L+    R   ++   +L+  M  +
Sbjct: 252 LVGKLCGDQKNGVAWEVLHCVMRLGGAV-DAASCNALLTWLGRGRDIKRMNELLAEMEKR 310

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML------QMGLSPDTATYNTLLVESCRK 113
            ++P V T+  L+N LCK  R D A +V D +        +G+ PD   +NTL+   C+ 
Sbjct: 311 KIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKV 370

Query: 114 ENMSEAEEIFCEMSRRGV-APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
               +   +  EM    +  P+ V+++ LI  F + G  DRA   FR+M   G+ P+ + 
Sbjct: 371 GKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVIT 430

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
              +++G C++G V  A++  +EM  KG   +  TY  +++  C    +  A   F EML
Sbjct: 431 LNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEML 490

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
             G  PD   + +LI G C  G MN A  +   +       D   YN LI GFCK  ++E
Sbjct: 491 SSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLE 550

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           +  +L  +M    + P+ I+Y  LI+     G    A ++  +M+ +G++P++V+   II
Sbjct: 551 RVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAII 610

Query: 353 KGYCRSGDASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
             YC   +  +  +   +M S   V P+++ YN LI+   R  ++D+A +L+  M+ + +
Sbjct: 611 HAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRV 670

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            P+  TYN IL G   +  +H +  ++ RM+E+   PD  T   L
Sbjct: 671 RPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVL 715



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 222/446 (49%), Gaps = 10/446 (2%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           E   L+  +  +G+ P  F    L+  LC   +   A EVL  ++++G + D A+ N LL
Sbjct: 229 EVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALL 288

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS---- 163
               R  ++    E+  EM +R + P +V+F  L+    +  ++D AL  F  ++     
Sbjct: 289 TWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGS 348

Query: 164 --AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV--MDVVTYNTILNGLCRAK 219
              G+ PD VL+  +I+G C+ G   + L + +EM + G +   + VTYN +++G  +A 
Sbjct: 349 NWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEM-KMGNINRPNTVTYNCLIDGFFKAG 407

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
               A +LF +M E GV P+  T  TL+ G CK G +++A+  F+ M  K +K +  TY 
Sbjct: 408 NFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYT 467

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
            LI  FC V  + +A + + +M+S   SP+ + Y  LI+G C  G + +A  +  ++   
Sbjct: 468 ALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLA 527

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           G        N +I G+C+     +  E L++M   GV PD+I+YNTLI+   +  +   A
Sbjct: 528 GFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATA 587

Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLIN 458
             ++ KM  +GL P V+TY  I+  +C +  + +   I   M     + P+   Y  LI+
Sbjct: 588 SKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILID 647

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPD 484
                N++  A    ++M  +   P+
Sbjct: 648 ALCRNNDVDRAISLMEDMKVKRVRPN 673



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 194/370 (52%), Gaps = 2/370 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV-YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++ LCK  K +     L EM+   +  P+TVTYN LI+ + + G  + A +L   M+ +
Sbjct: 363 LIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEE 422

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           G++P V T N+L++GLCK GR  RA E  +EM   GL  + ATY  L+   C   N++ A
Sbjct: 423 GVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRA 482

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            + F EM   G +PD V + +LI      G+++ A +   ++K AG   D   Y ++I+G
Sbjct: 483 MQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISG 542

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+   +    ++  EM E G   D +TYNT+++ L +      A  +  +M++ G+ P 
Sbjct: 543 FCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPS 602

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKS-IKPDIVTYNTLIDGFCKVGEMEKANKLW 298
             T+  +IH +C   N+++ + +F  M   S + P+ V YN LID  C+  ++++A  L 
Sbjct: 603 VVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLM 662

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            DM  +++ PN  +Y  ++ G      + +AF L   MV +  +P  ++   + +     
Sbjct: 663 EDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAV 722

Query: 359 GDASKADEFL 368
           G+  K   F+
Sbjct: 723 GEIEKLKHFV 732



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 210/429 (48%), Gaps = 52/429 (12%)

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQM--GLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           + L+  L K GR   A  VLDEM Q   G S                      E +F E+
Sbjct: 178 HGLLRVLLKSGRAGDALHVLDEMPQANSGFS-------------------VTGEIVFGEL 218

Query: 127 SRRGVA-PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC---R 182
            R G + PD      ++G+ ++ G+              G+ PD    T ++   C   +
Sbjct: 219 VRSGRSFPD----GEVVGLVAKLGE-------------RGVFPDGFKLTQLVGKLCGDQK 261

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           NG   E L     ++  G  +D  + N +L  L R + +   ++L  EM +R + P   T
Sbjct: 262 NGVAWEVLHC---VMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVT 318

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKS------IKPDIVTYNTLIDGFCKVGEMEKANK 296
           F  L++  CK   +++AL +FD +  K       ++PD+V +NTLIDG CKVG+ E    
Sbjct: 319 FGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLS 378

Query: 297 LWADMISRKIS-PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
           L  +M    I+ PN ++Y  LI+G+   G+   A  L+ +M  +G++P +++ NT++ G 
Sbjct: 379 LLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGL 438

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
           C+ G   +A EF ++M  +G+  ++ +Y  LI+ F    N+++A     +M + G  PD 
Sbjct: 439 CKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDA 498

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
           + Y  +++G C  GRM+D+ +++ ++   G + DRS Y  LI+G   +  L+  +    E
Sbjct: 499 VVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTE 558

Query: 476 MLQRGFVPD 484
           M + G  PD
Sbjct: 559 MEETGVKPD 567



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 48/89 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC+++ +D A   + +M+ K V P+T TYN ++     +  L +AF+LM+ M  + 
Sbjct: 645 LIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEA 704

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
            +P   T   L   L   G  ++ K  ++
Sbjct: 705 CRPDYITMEVLTEWLSAVGEIEKLKHFVE 733


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 263/484 (54%), Gaps = 11/484 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++ CK  ++  A   +  +  + +  DTVTYNT+I+  C  G  +EA+Q ++ M   G
Sbjct: 135 LIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMG 191

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   +YN+LI+G CK G   RAK ++DE+ ++ L       +T+L+ S    N+   E
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL-----ITHTILLSSYY--NLHAIE 244

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E + +M   G  PD+V+FS++I    + G++    +  REM+   + P++V YT +++  
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 304

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      AL +  +M+ +G  +D+V Y  +++GL +A  L EA+  F  +LE    P+ 
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 364

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T L+ G CK G+++ A  +   M +KS+ P++VTY+++I+G+ K G +E+A  L   
Sbjct: 365 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 424

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + PN  +YG +I+G    G    A  L  EM   G++      + ++    R G 
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +    +  MVS+GV  D I+Y +LI+ F +  + + A A   +M+ +G+  DV++YNV
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G  + G++  ++     M EKG+ PD +T+  ++N    Q + +   +  D+M   G
Sbjct: 545 LISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 603

Query: 481 FVPD 484
             P 
Sbjct: 604 IKPS 607



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 271/531 (51%), Gaps = 49/531 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK   + SA+  + +M +K V P+ VTY+++IN Y ++G LEEA  L+  M  + 
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 429

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTY ++I+GL K G+ + A E+  EM  +G+  +    + L+    R   + E +
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  +GV  D +++++LI +F + G  + AL +  EM+  G+  D V Y ++I+G 
Sbjct: 490 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGM 549

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V      +  M EKG   D+ T+N ++N   +         L+++M   G+ P  
Sbjct: 550 LKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSL 608

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY---------------------- 278
            +   ++   C++G M +A+++ + M    I P++ TY                      
Sbjct: 609 MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 668

Query: 279 -------------NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                        NTLI   CK+G  +KA  +  DM +R   P+ +++  L++GY    H
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 728

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A   +  M+  GI P + + NTII+G   +G   + D++LS+M S G+ PD  +YN 
Sbjct: 729 VRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNA 788

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  +  NM  +  +  +M   GLVP   TYNV+++ F   G+M  +  +L  M ++G
Sbjct: 789 LISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRG 848

Query: 446 LNPDRSTYTTLING--------HVSQNN----LKEAFRFHDEML-QRGFVP 483
           ++P+ STY T+I+G         V  N     L EA     EM+ ++G++P
Sbjct: 849 VSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 899



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 252/520 (48%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  K+    + L EME+  VYP+ VTY TL+++  +      A  L + M  +G
Sbjct: 265 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 324

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   +  Y  L++GL K G    A++    +L+    P+  TY  L+   C+  ++S AE
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M  + V P++V++S++I  + + G L+ A+   R+M+   +VP+   Y  +I+G 
Sbjct: 385 FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 444

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A+++  EM   G   +    + ++N L R   + E   L  +M+ +GV  D 
Sbjct: 445 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+LI    K G+   AL   + M ++ +  D+V+YN LI G  K G++  A+  +  
Sbjct: 505 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKG 563

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I P+  ++ I++N     G      +LW +M   GIKP+L+SCN ++   C +G 
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623

Query: 361 ASKADEFLSKMVSEGVDP------------------DSI-----------------SYNT 385
             +A   L++M+   + P                  D+I                  YNT
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI    +     KA  ++  ME +G +PD +T+N ++ G+     +  +      M+E G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++P+ +TY T+I G      +KE  ++  EM  RG  PDD
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 783



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 230/452 (50%), Gaps = 16/452 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L +  +I   K  + +M  KGV  D + Y +LI+ + + G  E A      M  +G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA- 119
           +   V +YN LI+G+ K G+   A      M + G+ PD AT+N +++ S RK+  SE  
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFN-IMMNSQRKQGDSEGI 592

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++ +M   G+ P ++S + ++G+   NG+++ A+    +M    + P+   Y I ++ 
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++       K  + +L  G  +    YNT++  LC+  M  +A  +  +M  RG  PD
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF +L+HG+    ++ KAL+ + +M +  I P++ TYNT+I G    G +++ +K  +
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M SR + P+  +Y  LI+G   +G++  +  ++ EM+  G+ P   + N +I  +   G
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVR-------EEN-----MDKAFALVSKM- 406
              +A E L +M   GV P++ +Y T+I+G  +       E N     + +A  L+ +M 
Sbjct: 833 KMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMV 892

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           E +G +P   T   I   F + G   D+E  L
Sbjct: 893 EEKGYIPCNQTIYWISAAFSKPGMKVDAERFL 924



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 217/437 (49%), Gaps = 35/437 (8%)

Query: 81  CDR---AKEVLDEMLQMGLSPDTATYNTLLVE-SCRKENMSEAEEIFCEMSRRGVAPDIV 136
           C+R   A   L  M   G+ PD+  +N+L+ + +       +   I+ +M   GV+PD+ 
Sbjct: 71  CERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVF 130

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           + + LI  F + G+L  A+   R   +  +  D V Y  +I+G C +G   EA +   EM
Sbjct: 131 ALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 187

Query: 197 LEKGCVMDVVTYNTILNGLC------RAKMLTEA----------------------DDLF 228
           ++ G + D V+YNT+++G C      RAK L +                       ++ +
Sbjct: 188 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 247

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M+  G  PD  TF+++I+  CK G + +   L   M + S+ P+ VTY TL+D   K 
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKA 307

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
                A  L++ M+ R I  + + Y +L++G    G + EA + +  ++     P +V+ 
Sbjct: 308 NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTY 367

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             ++ G C++GD S A+  +++M+ + V P+ ++Y+++ING+V++  +++A +L+ KME+
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 427

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           Q +VP+  TY  ++ G  + G+   +  +   M   G+  +      L+N       +KE
Sbjct: 428 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487

Query: 469 AFRFHDEMLQRGFVPDD 485
                 +M+ +G   D 
Sbjct: 488 VKGLVKDMVSKGVTLDQ 504



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 201/420 (47%), Gaps = 55/420 (13%)

Query: 110 SCRKENMSEAEEIFCEMSRRGVAPDIVS---------FSTLIGIFSRNGQLDRALMYFRE 160
           S ++  + E+EE    +++R   PD+           F TL  ++    +L  A      
Sbjct: 24  SIKRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSA 83

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKM-RDEMLEKGCVMDVVTYNTILNGLCRAK 219
           M + G+VPD+ L+  +I+ +  NG V + + +   +M+  G   DV   N +++  C+  
Sbjct: 84  MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 143

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            L+ A  L      R +  D  T+ T+I G C+ G  ++A      M +  I PD V+YN
Sbjct: 144 RLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYN 200

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           TLIDGFCKVG   +A  L  D IS     N I++ IL++ Y ++  + EA+R   +MV  
Sbjct: 201 TLIDGFCKVGNFVRAKAL-VDEISE---LNLITHTILLSSYYNLHAIEEAYR---DMVMS 253

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           G  P +V+ ++II   C+ G   +    L +M    V P+ ++Y TL++   +      A
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313

Query: 400 FALVSKMENQGL-----------------------------------VPDVITYNVILTG 424
            AL S+M  +G+                                   VP+V+TY  ++ G
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C+ G +  +E I+ +M+EK + P+  TY+++ING+V +  L+EA     +M  +  VP+
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 230/425 (54%), Gaps = 1/425 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++  A   L  M++ GV P+    NT I+       L++A +    M   G+ P V TYN
Sbjct: 296 RLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYN 355

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SR 128
            LI G C   + D+A E++D+M   G SPD  +Y T++   CR + ++E  E+  +M + 
Sbjct: 356 CLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTD 415

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
             + PD V++++LI + S++G  D AL   +E +      D V Y+ I++ YC+ G + +
Sbjct: 416 SKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQK 475

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A ++  EM  KGC  DVVTY ++L+G CR   L +A  +  +M +    P+  T+TT ++
Sbjct: 476 AKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLN 535

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G C++G   +A  + ++  ++   P+ +TY+ ++ G  + G++ +A  +  +MI +   P
Sbjct: 536 GLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFP 595

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           N +   +L++  C  G   EA +L  E + KG    +V+  T+I G+C+  D   A   L
Sbjct: 596 NPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLL 655

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             M      PD+++Y  LI+   + + +++A  L  KM  QGLVP  +TY  ++  +CR+
Sbjct: 656 DDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRK 715

Query: 429 GRMHD 433
           GR+ D
Sbjct: 716 GRVED 720



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 236/483 (48%), Gaps = 3/483 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++   C  H++D A   + +M  KG  PD V+Y T++   CR+  L E  +L+  M +  
Sbjct: 357 LIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDS 416

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            L P   TYNSLI  L K G  D A E+L E  ++    D   Y+ ++   C++  + +A
Sbjct: 417 KLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKA 476

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +E+  EM  +G  PD+V++++++  F R G+LD+A    ++M      P+ V YT  +NG
Sbjct: 477 KELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNG 536

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CRNG  LEA KM +   E+    + +TY+ +++GL R   L EA D+  EM+ +G FP+
Sbjct: 537 LCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPN 596

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
                 L+H  C+DG   +A  L      K    ++V + T+I GFC+  ++E A  L  
Sbjct: 597 PVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 656

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           DM      P+ ++Y  LI+       + EA  L  +M+ +G+ P+ V+  ++I  YCR G
Sbjct: 657 DMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKG 716

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
                D                +YN +I    +   +++A +L+ ++       D  T +
Sbjct: 717 RVE--DLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCH 774

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++  +   G    +  +  RM  + L PD      +    V +  L+EA R     ++R
Sbjct: 775 VLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVER 834

Query: 480 GFV 482
           G V
Sbjct: 835 GHV 837



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 251/469 (53%), Gaps = 1/469 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L K      AK  L  M ++ +      +  ++ +Y R G L +A +++  M   G
Sbjct: 252 MLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAG 311

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +   N+ I+ L       +A    + M+ +G++P+  TYN L+   C    + +A 
Sbjct: 312 VEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAM 371

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS-AGLVPDNVLYTIIING 179
           E+  +M  +G +PD VS+ T++G+  R+ +L+      ++M++ + L+PD+V Y  +I  
Sbjct: 372 ELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQM 431

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++G   EAL++  E  +    +D V Y+ I++  C+   + +A +L +EM  +G  PD
Sbjct: 432 LSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPD 491

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T+++ G C+ G +++A  +   M +   KP+ VTY T ++G C+ G+  +A K+  
Sbjct: 492 VVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMN 551

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                  +PN I+Y ++++G    G + EA  +  EM+GKG  P  V  N ++   CR G
Sbjct: 552 MSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDG 611

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A++ L + +++G   + +++ T+I+GF ++++++ A +L+  M      PD +TY 
Sbjct: 612 KPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYT 671

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            ++    +  R+ ++  +  +M+ +GL P   TY ++I+ +  +  +++
Sbjct: 672 ALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 220/419 (52%), Gaps = 1/419 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            Y  ++  L K   C  AK +L  M +  +      +  ++V   R   + +A ++   M
Sbjct: 248 VYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLM 307

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            + GV P++   +T I I     +L +AL +   M   G+ P+ V Y  +I GYC    V
Sbjct: 308 QKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQV 367

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM-LERGVFPDFYTFTT 245
            +A+++ D+M  KGC  D V+Y T++  LCR K L E  +L  +M  +  + PD  T+ +
Sbjct: 368 DQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNS 427

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI    K G+ ++AL +     +   K D V Y+ ++  +CK G+++KA +L ++M S+ 
Sbjct: 428 LIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKG 487

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ ++Y  +++G+C +G + +A ++  +M     KP  V+  T + G CR+G + +A 
Sbjct: 488 CDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEAR 547

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           + ++    E   P++I+Y+ +++G  RE  +++A  +V +M  +G  P+ +  N+++   
Sbjct: 548 KMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSL 607

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           CR G+  ++  +L   + KG   +   +TT+I+G   +++L+ A    D+M      PD
Sbjct: 608 CRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPD 666


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/443 (32%), Positives = 233/443 (52%), Gaps = 5/443 (1%)

Query: 45  FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
            + +A  ++  M   G  P V ++  LI G  K G   R    LD ML+ GL P+   YN
Sbjct: 9   LVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYN 68

Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
            L+   C+   ++EAE     M +   AP++VS++ +I  + +   +++AL + REM+  
Sbjct: 69  NLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREMEEL 127

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           G  P    Y+ I+  +C+ G V +A+ +  EM  KGC  D+V +N +L+GL RA+ + EA
Sbjct: 128 GHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEA 187

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            +LF  M  RG  PD  T+ T+I G CK   +++A+ L + M Q+ + P  VTY TLID 
Sbjct: 188 RELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDH 247

Query: 285 FCKVGEMEKANKLWADMISRK---ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
            CK   +++A +++  M         P Y S  ILING C      EA  ++ EM G+GI
Sbjct: 248 LCKFARLQQAYEVFEKMAEGPCPCTEPAY-SVLILINGLCKARRPGEAKEMFQEMRGRGI 306

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            PT+V+ NT+++G   +     A E    M+ +   P+  +Y  LI+   + + +++AF 
Sbjct: 307 SPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFK 366

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           L+S M ++G VP +  + V+L+   R GR+ D+  +   M          +   L++G +
Sbjct: 367 LLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGIL 426

Query: 462 SQNNLKEAFRFHDEMLQRGFVPD 484
            + ++ EA  F  +M   G VPD
Sbjct: 427 RRGSVDEAKDFLKQMTDTGIVPD 449



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 207/412 (50%), Gaps = 3/412 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +  A+ +L  M Q    P+ V+YN +I+ YC+   +E+A   +  M   G
Sbjct: 70  LISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKALAFLREMEELG 128

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    Y+S++   CK G   +A +V  EM   G  PD   +N LL    R   + EA 
Sbjct: 129 HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 188

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M+ RG  PD+V+++T+I    +  +LD A+     MK   + P  V YT +I+  
Sbjct: 189 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 248

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL--NGLCRAKMLTEADDLFNEMLERGVFP 238
           C+   + +A ++ ++M E  C      Y+ ++  NGLC+A+   EA ++F EM  RG+ P
Sbjct: 249 CKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISP 308

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
              T+ TL+ G      +  A+ L   M  +   P++ TY  LI   CK  ++E+A KL 
Sbjct: 309 TVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLL 368

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
           + M  +   P+   + +L++     G + +AF L+ EM     +  + S N ++ G  R 
Sbjct: 369 SAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRR 428

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           G   +A +FL +M   G+ PD  +Y+ L+ G   +   D+A  LV ++   G
Sbjct: 429 GSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 250/483 (51%), Gaps = 19/483 (3%)

Query: 1   MVNALC-KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC K    D+  + L  M + G  PD  +Y+TL+   C E   EEA +L++ M+  
Sbjct: 54  LLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAED 113

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V +Y+++I+G  K+G   +A  +  +ML  G+ P+  T N+++   C+ + M 
Sbjct: 114 GDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 173

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +AE +  +M    + P+  ++++LI  +  +GQ   A+   +EM   G  P+ V Y ++I
Sbjct: 174 KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLI 233

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  C++GF  EA ++ + M++ G   D  TY ++L+G      L E +++ + M++ G+ 
Sbjct: 234 DCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMR 293

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            + +TF+  I+ +CK G +++A   F  M Q    PDIVTY T+IDG CK+G ++ A   
Sbjct: 294 SNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSR 353

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  MI   +SPN I++  LI+G+   G   +A  L+YEM+ +GI P +     +I    +
Sbjct: 354 FCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFK 413

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G  ++A +    M   G  P+ +SYNT+I+G+     + +   L+  M   GL P  +T
Sbjct: 414 EGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVT 473

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           +N +L G                M+  GL PD  T  TLI+       +++      EML
Sbjct: 474 FNTLLDG----------------MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREML 517

Query: 478 QRG 480
            + 
Sbjct: 518 GKA 520



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 237/454 (52%), Gaps = 18/454 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++  LC + K + A   +  M + G    PD V+Y+T+I+ + +EG + +A+ L   M  
Sbjct: 90  LLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLD 149

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G+ P V T NS+I+GLCK    D+A+ VL +M+   + P+  TYN+L+         +E
Sbjct: 150 HGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTE 209

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  I  EMSR G  P++V+++ LI    ++G    A   F  M  +G  PD   Y  +++
Sbjct: 210 AVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLH 269

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G ++E   ++D M++ G   +  T++  +   C+   L EA   F +M + G  P
Sbjct: 270 GYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMP 329

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+TT+I G CK G ++ A++ F  M    + P+I+T+ TLI GF   G+ EKA +L+
Sbjct: 330 DIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELF 389

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M+ R I P+   +  +I+     G VTEA +L+  M   G KP +VS NT+I GY  +
Sbjct: 390 YEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIA 449

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  +  + L  M+  G+ P ++++NTL++G V                + GL PDV T 
Sbjct: 450 GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV----------------SMGLKPDVDTC 493

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
             ++   C  GR+ D   +   M+ K    D  T
Sbjct: 494 KTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 527



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 246/448 (54%), Gaps = 3/448 (0%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGKGLKPGVFTYNSLINGLC 76
           L ++ + G+  D V +  L+   C +    +A  + +  M   G  P VF+Y++L+ GLC
Sbjct: 36  LGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLC 95

Query: 77  KKGRCDRAKEVLDEMLQMG--LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPD 134
            + +C+ A E++  M + G    PD  +Y+T++    ++ ++ +A  +FC+M   G+ P+
Sbjct: 96  AEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPN 155

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           +V+ +++I    +   +D+A    ++M    ++P+   Y  +I+GY  +G   EA+++  
Sbjct: 156 VVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILK 215

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM   G   +VVTYN +++ LC++    EA ++FN M++ G  PD  T+ +L+HG+  +G
Sbjct: 216 EMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEG 275

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
           N+ +  N+ D+M Q  ++ +  T++  I  +CK G +++A+  +  M      P+ ++Y 
Sbjct: 276 NLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYT 335

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            +I+G C +G + +A   + +M+  G+ P +++  T+I G+   G   KA+E   +M+  
Sbjct: 336 TVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDR 395

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+ PD   +  +I+   +E  + +A  L   M   G  P+V++YN ++ G+   G + + 
Sbjct: 396 GIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEV 455

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +L  M+  GL P   T+ TL++G VS
Sbjct: 456 MKLLDDMLLIGLKPTAVTFNTLLDGMVS 483



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 233/463 (50%), Gaps = 3/463 (0%)

Query: 24  KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
           K V PD  T+  LI+  C  G L   F  +  +   GL+     +  L+  LC K R   
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 84  AKE-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG--VAPDIVSFST 140
           A   VL  M ++G +PD  +Y+TLL   C ++   EA E+   M+  G    PD+VS+ST
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I  F + G + +A   F +M   G+ P+ V    +I+G C+   + +A  +  +M+++ 
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            + +  TYN++++G   +   TEA  +  EM   G  P+  T+  LI   CK G   +A 
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            +F+ M Q   KPD  TY +L+ G+   G + + N +   M+   +  N+ ++ I I  Y
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C  G + EA   + +M   G  P +V+  T+I G C+ G    A     +M+ +G+ P+ 
Sbjct: 307 CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNI 366

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           I++ TLI+GF      +KA  L  +M ++G+ PDV  +  ++    ++G++ +++ +   
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDL 426

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           M   G  P+  +Y T+I+G+     + E  +  D+ML  G  P
Sbjct: 427 MPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKP 469



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 225/435 (51%), Gaps = 3/435 (0%)

Query: 53  MNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCR 112
           M     K + P + T+  LI+  C  G  +     L ++++ GL  D   +  LL   C 
Sbjct: 1   MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCA 60

Query: 113 KENMSEAEEIFCE-MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG--LVPD 169
           K+  S+A  I    M   G  PD+ S+STL+       + + A      M   G    PD
Sbjct: 61  KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120

Query: 170 NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
            V Y+ +I+G+ + G V +A  +  +ML+ G   +VVT N++++GLC+ + + +A+ +  
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
           +M++  + P+  T+ +LIHG+   G   +A+ +   M++   +P++VTYN LID  CK G
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
              +A +++  MI     P+  +YG L++GY + G++ E   +   MV  G++    + +
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFS 300

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
             I  YC+ G   +A     KM   G  PD ++Y T+I+G  +   +D A +   +M + 
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD 360

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           GL P++IT+  ++ GF   G+   +E + + M+++G+ PD + +T +I+    +  + EA
Sbjct: 361 GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEA 420

Query: 470 FRFHDEMLQRGFVPD 484
            +  D M + G  P+
Sbjct: 421 QKLFDLMPRAGAKPN 435



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 207/384 (53%), Gaps = 16/384 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK   +D A+  L +M  + + P+  TYN+LI+ Y   G   EA +++  MS  G
Sbjct: 162 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 221

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN LI+ LCK G    A+E+ + M+Q G  PD  TY +LL     + N+ E  
Sbjct: 222 QRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMN 281

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M + G+  +  +FS  I  + + G+LD A + F +M+  G +PD V YT +I+G 
Sbjct: 282 NVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGL 341

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A+    +M++ G   +++T+ T+++G        +A++LF EM++RG+ PD 
Sbjct: 342 CKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDV 401

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             FT +I    K+G + +A  LFD+M +   KP++V+YNT+I G+   GE+ +  KL  D
Sbjct: 402 TIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDD 461

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+   + P  +++  L++G                MV  G+KP + +C T+I   C  G 
Sbjct: 462 MLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKTLIDSCCEDGR 505

Query: 361 ASKADEFLSKMVSEGVDPDSISYN 384
                    +M+ +    D+I+ N
Sbjct: 506 IEDILTLFREMLGKADKTDTITEN 529



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L K+ K+  A+     M + G  P+ V+YNT+I+ Y   G + E  +L++ M   G
Sbjct: 407 MIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG 466

Query: 61  LKPGVFTYNSLINGL-------------------CKKGRCDRAKEVLDEMLQMGLSPDTA 101
           LKP   T+N+L++G+                   C+ GR +    +  EML      DT 
Sbjct: 467 LKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTI 526

Query: 102 TYNTLL 107
           T N  L
Sbjct: 527 TENIKL 532


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 225/462 (48%), Gaps = 35/462 (7%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           + A   L EME  G  P+ VTYN L++A+ R G    A ++ +SM  KG++P VFTY SL
Sbjct: 240 NEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSL 299

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++   + G+ ++A E+ ++M     +P++ T+N L+    + +N SE   IF +M   GV
Sbjct: 300 LSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGV 359

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            PDIV++++L+G F +NG     L  FR MK AG  PD   + I+I  Y R G   +AL 
Sbjct: 360 EPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALS 419

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + D ML+ GC  D+ T+NT+L  L R      A+ + +E+      P+   + +++H + 
Sbjct: 420 IYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYA 479

Query: 252 KDGNMNK-----------------------------------ALNLFDIMTQKSIKPDIV 276
             G + K                                   A + F  M       D  
Sbjct: 480 NGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTS 539

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
           T+N +I  + K G M+KA   +A + S  + P+ ++Y  L+  Y   G   +      E 
Sbjct: 540 TFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLREC 599

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           +  G  P LVS NT+I  Y + G  S A     +MVS G+ PDS +YNT +  +V     
Sbjct: 600 MAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMF 659

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
            +A ++V  M   G  PD +TY  ++  +C+ G+  + E IL
Sbjct: 660 PEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERIL 701



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 230/476 (48%), Gaps = 4/476 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           + A     +M+     PD VTYN L++ Y + G+  EA  ++  M   G  P + TYN L
Sbjct: 205 EEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNEL 264

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++   + G C+ A E+ D M+  G+ PD  TY +LL    R   + +A EI+ +M     
Sbjct: 265 LSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNC 324

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P+  +F+ LIG+  +N      ++ F +M++ G+ PD V +  ++  + +NG   E LK
Sbjct: 325 TPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLK 384

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +   M + G   D  T+N ++    R     +A  +++ ML+ G  PD  TF TL+    
Sbjct: 385 VFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALA 444

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM--ISRKISPN 309
           ++G    A  + D + + S KP+ + Y +++  +   GE+EK  ++   +  I    +  
Sbjct: 445 REGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKI 504

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            +   +L+   CS+  V EA   +  M   G      + N +I  Y + G   KA +  +
Sbjct: 505 LLKTFVLVYSKCSL--VDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFA 562

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            + S G++PD ++YN L+  + RE    K  A + +    G  PD+++YN ++  + + G
Sbjct: 563 LLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHG 622

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++  +  I   M+  G+ PD  TY T +  +V+     EA      M + G  PD+
Sbjct: 623 QLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDE 678



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 241/520 (46%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L ++ ++ +       + ++G   D   Y +LI+A  R    +EA      M   G
Sbjct: 88  MLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAG 147

Query: 61  LKPGVFTYNSLINGLCKKGRC-DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +P + TYN +I+   KKGR  +   E+ +EM   G+ PD  TYNT +          EA
Sbjct: 148 PQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEA 207

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+F +M      PD V+++ L+ ++ + G  + A    +EM+SAG +P+ V Y  +++ 
Sbjct: 208 TELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSA 267

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + R G    A +M+D M+ KG   DV TY ++L+   RA  + +A +++N+M      P+
Sbjct: 268 FGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPN 327

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +TF  LI  H K+ N ++ + +F+ M    ++PDIVT+N+L+  F K G   +  K++ 
Sbjct: 328 SFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFR 387

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M      P+  ++ ILI  Y   G   +A  ++  M+  G  P L + NT++    R G
Sbjct: 388 GMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREG 447

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVR-------EENMD--------------K 398
               A+  L ++      P+ I+Y ++++ +         +E +D              K
Sbjct: 448 RWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLK 507

Query: 399 AFALVSK--------------MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            F LV                M + G + D  T+N +++ + ++G M  +      +   
Sbjct: 508 TFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRST 567

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           GL PD  TY  L+  +  +   ++      E +  G  PD
Sbjct: 568 GLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPD 607



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 204/418 (48%), Gaps = 2/418 (0%)

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           S++ GL ++G+ ++A EV + M Q +   PD  T   +L    R+  ++    +F  +  
Sbjct: 51  SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G   D+ ++++LI   SRN +   AL +F +MK AG  P  V Y +II+ Y + G   E
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE 170

Query: 189 -ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
             L++ +EM  +G   D  TYNT +       +  EA +LF +M      PD  T+  L+
Sbjct: 171 NILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALL 230

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
             + K G  N+A N+   M      P+IVTYN L+  F + G    A ++   M+S+ I 
Sbjct: 231 DVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIE 290

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+  +Y  L++ Y   G V +A  ++ +M      P   + N +I  + ++ + S+    
Sbjct: 291 PDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVI 350

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
              M + GV+PD +++N+L+  F +     +   +   M+  G  PD  T+N+++  + R
Sbjct: 351 FEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGR 410

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            G    +  I   M++ G  PD +T+ TL+     +   + A    DE+ +  + P+D
Sbjct: 411 CGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPND 468



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 174/360 (48%), Gaps = 2/360 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +M+  GV PD VT+N+L+ A+ + G   E  ++   M   G +P   T+N LI    + G
Sbjct: 353 DMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCG 412

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D+A  + D MLQ G +PD AT+NTLL    R+     AE I  E++R    P+ ++++
Sbjct: 413 SSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYA 472

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           +++  ++  G+L++       + +  +    +L    +  Y +   V EA      M   
Sbjct: 473 SMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHH 532

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G + D  T+N +++   +  M+ +A D F  +   G+ PD  T+  L+  + ++G   K 
Sbjct: 533 GYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKC 592

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
                        PD+V+YNT+I  + K G++  A +++ +M+S  I P+  +Y   +  
Sbjct: 593 EATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGC 652

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           Y + G   EA  +   M   G KP  V+  T++  YC+ G   + +  L  + S   DP+
Sbjct: 653 YVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS--DPN 710



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 185/393 (47%), Gaps = 44/393 (11%)

Query: 136 VSFSTLIGI---FSRNGQLDRALMYFREMK-SAGLVPDNVLYTIIINGYCRNGFVLEALK 191
           +S S L+ I     R GQ ++AL  F  M+ S    PD V   +++    R   +    +
Sbjct: 44  LSSSELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSR 103

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +   + E+G  +DV  Y ++++ L R +   EA   F +M E G  P   T+  +I  + 
Sbjct: 104 LFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYG 163

Query: 252 KDG-NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM-EKANKLWADMISRKISPN 309
           K G +    L LF+ M  + I+PD  TYNT I   C  G + E+A +L+  M S   +P+
Sbjct: 164 KKGRSWENILELFEEMKAQGIQPDEYTYNTAITA-CASGSLCEEATELFTQMKSSNCTPD 222

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            ++Y  L++ Y   G   EA  +  EM   G  P +V+ N ++  + R+G  + A E   
Sbjct: 223 RVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKD 282

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ-------------------- 409
            MVS+G++PD  +Y +L++ + R   +++A  + ++M                       
Sbjct: 283 SMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNK 342

Query: 410 ---------------GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-GLNPDRSTY 453
                          G+ PD++T+N +L  F + G M+   L ++R ++K G  PD++T+
Sbjct: 343 NFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNG-MYSEVLKVFRGMKKAGFEPDKATF 401

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
             LI  +    +  +A   +D MLQ G  PD A
Sbjct: 402 NILIEAYGRCGSSDQALSIYDGMLQAGCTPDLA 434



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 35/263 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMN------ 54
           ++ AL ++ + + A++ L E+ +    P+ + Y ++++AY   G LE+  ++++      
Sbjct: 439 LLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIY 498

Query: 55  -----------------------------SMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                                        +M   G      T+N++I+   KKG  D+A 
Sbjct: 499 VPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKAT 558

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           +    +   GL PD  TYN L+    R+    + E    E    G  PD+VS++T+I  +
Sbjct: 559 DTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSY 618

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
           S++GQL  A   F EM S G+ PD+  Y   +  Y   G   EAL +   M + GC  D 
Sbjct: 619 SKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDE 678

Query: 206 VTYNTILNGLCRAKMLTEADDLF 228
           VTY T+++  C+     E + + 
Sbjct: 679 VTYRTLVDAYCKIGKFEEVERIL 701


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 130/383 (33%), Positives = 210/383 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ +C   +   A  FL +M + G  PD VT+ +L+N YC    +E+A  L + + G G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP V TY +LI  LCK    + A E+ ++M   G  P+  TYN L+   C      +A 
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M +R + P++++F+ LI  F + G+L  A   +  M    + PD   Y  +ING 
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + EA +M   M   GC  + V Y T+++G C++K + +   +F EM ++GV  + 
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI G+C  G  + A  +F+ M+ +   PDI TYN L+DG C  G++EKA  ++  
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R++  N ++Y I+I G C +G V +AF L+  +  KG+KP +++  T+I G+CR G 
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483

Query: 361 ASKADEFLSKMVSEGVDPDSISY 383
             +AD    KM  +G  P+   Y
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVY 506



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 229/441 (51%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
             +A  L   M      P +  +  L++ + K  R D    + ++M  +G+ P   T N 
Sbjct: 64  FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           ++   C       A     +M + G  PD+V+F++L+  +    +++ A+  F ++   G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
             P+ V YT +I   C+N  +  A+++ ++M   G   +VVTYN ++ GLC      +A 
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            L  +M++R + P+  TFT LI    K G + +A  L+++M Q S+ PD+ TY +LI+G 
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           C  G +++A +++  M      PN + Y  LI+G+C    V +  +++YEM  KG+    
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           ++   +I+GYC  G    A E  ++M S    PD  +YN L++G      ++KA  +   
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  + +  +++TY +I+ G C+ G++ D+  +   +  KG+ P+  TYTT+I+G   +  
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483

Query: 466 LKEAFRFHDEMLQRGFVPDDA 486
           + EA     +M + GF+P+++
Sbjct: 484 IHEADSLFKKMKEDGFLPNES 504



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 222/418 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ + K ++ D       +M+  G+ P   T N +++  C       A   +  M   G
Sbjct: 89  LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P + T+ SL+NG C   R + A  + D++L MG  P+  TY TL+   C+  +++ A 
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F +M   G  P++V+++ L+      G+   A    R+M    + P+ + +T +I+ +
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G ++EA ++ + M++     DV TY +++NGLC   +L EA  +F  M   G +P+ 
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +TTLIHG CK   +   + +F  M+QK +  + +TY  LI G+C VG  + A +++  
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M SR+  P+  +Y +L++G C  G V +A  ++  M  + +   +V+   II+G C+ G 
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
              A +    + S+G+ P+ I+Y T+I+GF R   + +A +L  KM+  G +P+   Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 227/426 (53%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  + +  L++   +    +    L   M   G+ P + T N +++ +C   +  RA   
Sbjct: 81  PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L +M+++G  PD  T+ +LL   C    + +A  +F ++   G  P++V+++TLI    +
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           N  L+ A+  F +M + G  P+ V Y  ++ G C  G   +A  +  +M+++    +V+T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +  +++   +   L EA +L+N M++  V+PD +T+ +LI+G C  G +++A  +F +M 
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +    P+ V Y TLI GFCK   +E   K++ +M  + +  N I+Y +LI GYC +G   
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  ++ +M  +   P + + N ++ G C +G   KA      M    +D + ++Y  +I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            G  +   ++ AF L   + ++G+ P+VITY  +++GFCR+G +H+++ +  +M E G  
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500

Query: 448 PDRSTY 453
           P+ S Y
Sbjct: 501 PNESVY 506



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 196/379 (51%)

Query: 101 ATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFRE 160
           ++Y  +L         ++A ++F  M      P I+ F+ L+ + ++  + D  +  F +
Sbjct: 49  SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM 220
           M+  G+ P      I+++  C +     A     +M++ G   D+VT+ ++LNG C    
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           + +A  LF+++L  G  P+  T+TTLI   CK+ ++N A+ LF+ M     +P++VTYN 
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           L+ G C++G    A  L  DM+ R+I PN I++  LI+ +  +G + EA  L+  M+   
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           + P + +  ++I G C  G   +A +    M   G  P+ + Y TLI+GF + + ++   
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            +  +M  +G+V + ITY V++ G+C  GR   ++ +  +M  +   PD  TY  L++G 
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408

Query: 461 VSQNNLKEAFRFHDEMLQR 479
                +++A    + M +R
Sbjct: 409 CCNGKVEKALMIFEYMRKR 427



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 134/280 (47%)

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           +Y  IL          +A DLF  M+     P    FT L+    K    +  ++LF+ M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               I P + T N ++   C   +  +A+     M+     P+ +++  L+NGYC    +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +A  L+ +++G G KP +V+  T+I+  C++   + A E  ++M + G  P+ ++YN L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           + G         A  L+  M  + + P+VIT+  ++  F + G++ +++ +   MI+  +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            PD  TY +LING      L EA +    M + G  P++ 
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 114/245 (46%)

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
           F ++  ++     +   N AL+LF  M      P I+ +  L+    K+   +    L+ 
Sbjct: 48  FSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFE 107

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M    I P   +  I+++  C       A     +M+  G +P LV+  +++ GYC   
Sbjct: 108 QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN 167

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A     +++  G  P+ ++Y TLI    +  +++ A  L ++M   G  P+V+TYN
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            ++TG C  GR  D+  +L  M+++ + P+  T+T LI+  V    L EA   ++ M+Q 
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287

Query: 480 GFVPD 484
              PD
Sbjct: 288 SVYPD 292


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 244/469 (52%), Gaps = 3/469 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           + +A   L  M++ GV PD    NT I    +   LE+A + +  M   G++P + +YN 
Sbjct: 248 LRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNC 307

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           LI G C   R D A E++ EM   G  PD  +Y T++   C+   + E + +   M +  
Sbjct: 308 LIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNS 367

Query: 131 -VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
            + PD V+++TLI   S++G  D AL++ RE +  G   D V Y+ +++ +C+N  + +A
Sbjct: 368 NLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKA 427

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             +  +M  KGC  DVVTY  I++G CR   + EA  +  +M + G  P+  T+T L++G
Sbjct: 428 KSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNG 487

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            C +G   +A  + ++  +    P+ +TY+ ++ G  + G++ +A  L  +MI +   PN
Sbjct: 488 LCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPN 547

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            +   +LI   C   +V  A +   E + KG    +V+  ++I G+C+ GD   A   L 
Sbjct: 548 PVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLE 607

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M      PD+I+Y TL +   ++  +D+A  L+ KM  +G+ P  +TY  ++  FC+ G
Sbjct: 608 DMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWG 667

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           R+ D   +L +MI +   P ++ Y  +I       N +EA +   ++L+
Sbjct: 668 RVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKLLGKVLR 714



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 242/485 (49%), Gaps = 38/485 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
           ++   C  H+ID A   + EM  KG  PD V+Y T++   C++  +EE  +LM +M    
Sbjct: 308 LIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNS 367

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            L P   TYN+LI  L K G  D A   L E  + G   D   Y+ ++   C+ +N+ +A
Sbjct: 368 NLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKA 427

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           + +  +M  +G  PD+V+++ +I  F R G++D A    ++M   G  P+ V YT+++NG
Sbjct: 428 KSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNG 487

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C NG  LEA +M +   E     + +TY+ +++GL R   L+EA DL  EM+E+G  P+
Sbjct: 488 LCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPN 547

Query: 240 -----------------------------------FYTFTTLIHGHCKDGNMNKALNLFD 264
                                                 FT++I+G C+ G+++ AL++ +
Sbjct: 548 PVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLE 607

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M   +  PD +TY TL D   K   +++A++L   M+ + I P  ++Y  +I+ +C  G
Sbjct: 608 DMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWG 667

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +  +L  +M+ +  +P     N +I+  C  G+  +A++ L K++      D+ + +
Sbjct: 668 RVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCH 725

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            LI  ++ + N   A+ +  +M  + L+PD+     +       G   +++ ++ R +E+
Sbjct: 726 ILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVER 785

Query: 445 GLNPD 449
           G+  +
Sbjct: 786 GIQTE 790



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 244/480 (50%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L K      A+  L  M ++G+      ++ ++ +Y R G L  A +++  M   G
Sbjct: 203 MLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAG 262

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +   N+ I  L K  + ++A   L+ M   G+ PD  +YN L+   C    + +A 
Sbjct: 263 VEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDAL 322

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
           E+  EM  +G  PD VS+ T++    ++ +++        M +++ L+PD V Y  +I  
Sbjct: 323 ELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYA 382

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++G   +AL    E  EKG  +D V Y+ +++  C+ K + +A  L  +M  +G  PD
Sbjct: 383 LSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPD 442

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T +I G C+ G +++A  +   M +   KP+ VTY  L++G C  G+  +A ++  
Sbjct: 443 VVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMIN 502

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                  +PN I+Y  +++G    G ++EA  L  EM+ KG  P  V  N +I+  CR+ 
Sbjct: 503 VSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQ 562

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
           +   A ++L + + +G   + +++ ++I GF +  ++D A +++  M      PD ITY 
Sbjct: 563 NVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYT 622

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +     ++ R+ ++  ++ +M+ KG++P   TY  +I+       + +  +  ++M+ R
Sbjct: 623 TLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR 682



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 213/421 (50%), Gaps = 1/421 (0%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
              Y ++++ L K   C  A+ +L  M + G+      ++ ++V   R   +  A  I  
Sbjct: 197 AIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILT 256

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            M + GV PD+   +T I +  +  +L++AL +   MK AG+ PD V Y  +I GYC   
Sbjct: 257 LMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVH 316

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-VFPDFYTF 243
            + +AL++  EM  KGC  D V+Y T++  LC+ + + E   L   M++   + PD  T+
Sbjct: 317 RIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTY 376

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            TLI+   K G+ + AL       +K    D V Y+ ++D FCK   ++KA  L  DM S
Sbjct: 377 NTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYS 436

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           +  +P+ ++Y  +I+G+C +G + EA ++  +M   G KP  V+   ++ G C +G + +
Sbjct: 437 KGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLE 496

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E ++        P++I+Y+ +++G  RE  + +A  L  +M  +G +P+ +  N+++ 
Sbjct: 497 AREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQ 556

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             CR   +  ++  L   + KG   +   +T++I G     +L  A    ++M      P
Sbjct: 557 SLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHP 616

Query: 484 D 484
           D
Sbjct: 617 D 617



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 224/458 (48%), Gaps = 5/458 (1%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK--PGVFTYNSLINGLCKKGRCDRAKE 86
           D + Y T+++   +    + A +++  M+ +G++  P  F+Y  ++    + G    A  
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSY--VMVSYSRAGMLRNALR 253

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           +L  M + G+ PD +  NT +    +   + +A      M   G+ PDIVS++ LI  + 
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYC 313

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG-CVMDV 205
              ++D AL    EM   G  PD V Y  ++   C++  V E  ++ + M++    + D 
Sbjct: 314 DVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQ 373

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTYNT++  L +     +A     E  E+G   D   ++ ++   CK+ N++KA +L   
Sbjct: 374 VTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVID 433

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K   PD+VTY  +IDGFC+VG++++A K+   M      PN ++Y +L+NG C  G 
Sbjct: 434 MYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGK 493

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             EA  +          P  ++ + ++ G  R G  S+A +   +M+ +G  P+ +  N 
Sbjct: 494 SLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINL 553

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI    R +N+  A   + +  ++G   +V+ +  ++ GFC+ G +  +  +L  M    
Sbjct: 554 LIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSN 613

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +PD  TYTTL +    ++ L EA     +ML +G  P
Sbjct: 614 KHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDP 651


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 263/484 (54%), Gaps = 11/484 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++ CK  ++  A   +  +  + +  DTVTYNT+I+  C  G  +EA+Q ++ M   G
Sbjct: 137 LIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMG 193

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   +YN+LI+G CK G   RAK ++DE+ ++ L       +T+L+ S    N+   E
Sbjct: 194 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL-----ITHTILLSSYY--NLHAIE 246

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E + +M   G  PD+V+FS++I    + G++    +  REM+   + P++V YT +++  
Sbjct: 247 EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 306

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +      AL +  +M+ +G  +D+V Y  +++GL +A  L EA+  F  +LE    P+ 
Sbjct: 307 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 366

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T L+ G CK G+++ A  +   M +KS+ P++VTY+++I+G+ K G +E+A  L   
Sbjct: 367 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 426

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + PN  +YG +I+G    G    A  L  EM   G++      + ++    R G 
Sbjct: 427 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 486

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +    +  MVS+GV  D I+Y +LI+ F +  + + A A   +M+ +G+  DV++YNV
Sbjct: 487 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 546

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           +++G  + G++  ++     M EKG+ PD +T+  ++N    Q + +   +  D+M   G
Sbjct: 547 LISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 605

Query: 481 FVPD 484
             P 
Sbjct: 606 IKPS 609



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 271/531 (51%), Gaps = 49/531 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK   + SA+  + +M +K V P+ VTY+++IN Y ++G LEEA  L+  M  + 
Sbjct: 372 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 431

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  FTY ++I+GL K G+ + A E+  EM  +G+  +    + L+    R   + E +
Sbjct: 432 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 491

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M  +GV  D +++++LI +F + G  + AL +  EM+  G+  D V Y ++I+G 
Sbjct: 492 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGM 551

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V      +  M EKG   D+ T+N ++N   +         L+++M   G+ P  
Sbjct: 552 LKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSL 610

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY---------------------- 278
            +   ++   C++G M +A+++ + M    I P++ TY                      
Sbjct: 611 MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 670

Query: 279 -------------NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                        NTLI   CK+G  +KA  +  DM +R   P+ +++  L++GY    H
Sbjct: 671 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 730

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A   +  M+  GI P + + NTII+G   +G   + D++LS+M S G+ PD  +YN 
Sbjct: 731 VRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNA 790

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G  +  NM  +  +  +M   GLVP   TYNV+++ F   G+M  +  +L  M ++G
Sbjct: 791 LISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRG 850

Query: 446 LNPDRSTYTTLING--------HVSQNN----LKEAFRFHDEML-QRGFVP 483
           ++P+ STY T+I+G         V  N     L EA     EM+ ++G++P
Sbjct: 851 VSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 901



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 250/520 (48%), Gaps = 36/520 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  K+    + L EME+  VYP+ VTY TL+++  +      A  L + M  +G
Sbjct: 267 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 326

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +   +  Y  L++GL K G    A++    +L+    P+  TY  L+   C+  ++S AE
Sbjct: 327 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 386

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M  + V P++V++S++I  + + G L+ A+   R+M+   +VP+   Y  +I+G 
Sbjct: 387 FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 446

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G    A+++  EM   G   +    + ++N L R   + E   L  +M+ +GV  D 
Sbjct: 447 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 506

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+LI    K G+   AL   + M ++ +  D+V+YN LI G  K G++  A+  +  
Sbjct: 507 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKG 565

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + I P+  ++ I++N     G      +LW +M   GIKP+L+SCN ++   C +G 
Sbjct: 566 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 625

Query: 361 ASKADEFLSKM-----------------------------------VSEGVDPDSISYNT 385
             +A   L++M                                   +S G+      YNT
Sbjct: 626 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 685

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI    +     KA  ++  ME +G +PD +T+N ++ G+     +  +      M+E G
Sbjct: 686 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 745

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           ++P+ +TY T+I G      +KE  ++  EM  RG  PDD
Sbjct: 746 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 785



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 230/452 (50%), Gaps = 16/452 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN L +  +I   K  + +M  KGV  D + Y +LI+ + + G  E A      M  +G
Sbjct: 477 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 536

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA- 119
           +   V +YN LI+G+ K G+   A      M + G+ PD AT+N +++ S RK+  SE  
Sbjct: 537 MPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFN-IMMNSQRKQGDSEGI 594

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +++ +M   G+ P ++S + ++G+   NG+++ A+    +M    + P+   Y I ++ 
Sbjct: 595 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 654

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++       K  + +L  G  +    YNT++  LC+  M  +A  +  +M  RG  PD
Sbjct: 655 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 714

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TF +L+HG+    ++ KAL+ + +M +  I P++ TYNT+I G    G +++ +K  +
Sbjct: 715 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 774

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M SR + P+  +Y  LI+G   +G++  +  ++ EM+  G+ P   + N +I  +   G
Sbjct: 775 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 834

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVR-------EEN-----MDKAFALVSKM- 406
              +A E L +M   GV P++ +Y T+I+G  +       E N     + +A  L+ +M 
Sbjct: 835 KMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMV 894

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           E +G +P   T   I   F + G   D+E  L
Sbjct: 895 EEKGYIPCNQTIYWISAAFSKPGMKVDAERFL 926



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 217/437 (49%), Gaps = 35/437 (8%)

Query: 81  CDR---AKEVLDEMLQMGLSPDTATYNTLLVE-SCRKENMSEAEEIFCEMSRRGVAPDIV 136
           C+R   A   L  M   G+ PD+  +N+L+ + +       +   I+ +M   GV+PD+ 
Sbjct: 73  CERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVF 132

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           + + LI  F + G+L  A+   R   +  +  D V Y  +I+G C +G   EA +   EM
Sbjct: 133 ALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 189

Query: 197 LEKGCVMDVVTYNTILNGLC------RAKMLTEA----------------------DDLF 228
           ++ G + D V+YNT+++G C      RAK L +                       ++ +
Sbjct: 190 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 249

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            +M+  G  PD  TF+++I+  CK G + +   L   M + S+ P+ VTY TL+D   K 
Sbjct: 250 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKA 309

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
                A  L++ M+ R I  + + Y +L++G    G + EA + +  ++     P +V+ 
Sbjct: 310 NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTY 369

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
             ++ G C++GD S A+  +++M+ + V P+ ++Y+++ING+V++  +++A +L+ KME+
Sbjct: 370 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 429

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           Q +VP+  TY  ++ G  + G+   +  +   M   G+  +      L+N       +KE
Sbjct: 430 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 489

Query: 469 AFRFHDEMLQRGFVPDD 485
                 +M+ +G   D 
Sbjct: 490 VKGLVKDMVSKGVTLDQ 506



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 201/420 (47%), Gaps = 55/420 (13%)

Query: 110 SCRKENMSEAEEIFCEMSRRGVAPDIVS---------FSTLIGIFSRNGQLDRALMYFRE 160
           S ++  + E+EE    +++R   PD+           F TL  ++    +L  A      
Sbjct: 26  SIKRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSA 85

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKM-RDEMLEKGCVMDVVTYNTILNGLCRAK 219
           M + G+VPD+ L+  +I+ +  NG V + + +   +M+  G   DV   N +++  C+  
Sbjct: 86  MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 145

Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
            L+ A  L      R +  D  T+ T+I G C+ G  ++A      M +  I PD V+YN
Sbjct: 146 RLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYN 202

Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           TLIDGFCKVG   +A  L  D IS     N I++ IL++ Y ++  + EA+R   +MV  
Sbjct: 203 TLIDGFCKVGNFVRAKAL-VDEISEL---NLITHTILLSSYYNLHAIEEAYR---DMVMS 255

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
           G  P +V+ ++II   C+ G   +    L +M    V P+ ++Y TL++   +      A
Sbjct: 256 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 315

Query: 400 FALVSKMENQGL-----------------------------------VPDVITYNVILTG 424
            AL S+M  +G+                                   VP+V+TY  ++ G
Sbjct: 316 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 375

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C+ G +  +E I+ +M+EK + P+  TY+++ING+V +  L+EA     +M  +  VP+
Sbjct: 376 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 435


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 245/489 (50%), Gaps = 35/489 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC+  ++D A  +   +  +    D V+Y TLI      G ++ A +L   MS  G
Sbjct: 45  ILKALCERKEVDQALSYFHSVSPRSDL-DVVSYTTLIMGLADSGRIDVACELFEEMSSSG 103

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V  Y ++IN L K  R D+A    + M+     PD  T+  ++   C+   ++ A 
Sbjct: 104 -SQCVVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRAC 162

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F EM+R+G  PDI+ +++L+   S+   +D A    +E+ S G+ P  V YT  I+G 
Sbjct: 163 EVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGL 222

Query: 181 CRNG---------------------------FVLE-----ALKMRDEMLEKGCVMDVVTY 208
           C+NG                           +VLE     AL ++DEM++KG  +DV  Y
Sbjct: 223 CKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCY 282

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
             +++GL   +   EA ++F  M+ +G  PD  T+  ++   CK G M  A  + +IM  
Sbjct: 283 TNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDA 342

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             ++ +   YN+L+DGF  V    +A  +++ M+ + + P+ ++Y IL+ G C +G   +
Sbjct: 343 AGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTAD 402

Query: 329 AFRLWYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           A  +  EM  + GI PT+VS  T+I G  ++G A +A +  ++MV  GV PD  S  +LI
Sbjct: 403 ARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLI 462

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
                 + MD+A  L+  M   G+ PD + YN ++   C   ++  +  +L  M++    
Sbjct: 463 QALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCV 522

Query: 448 PDRSTYTTL 456
           PD ST+  +
Sbjct: 523 PDGSTFRAM 531



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 220/458 (48%), Gaps = 45/458 (9%)

Query: 65  VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
           V +YN +I GLC  GR  RA E+L EM  +G+     T+  +L   C ++ + +A   F 
Sbjct: 4   VASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFH 63

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
            +S R    D+VS++TLI   + +G++D A   F EM S+G     V YT IIN   +  
Sbjct: 64  SVSPRS-DLDVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKAH 121

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
              +A+   + M+ + C  D+ T+  ++ GLC+A  L  A ++F EM  +G  PD   +T
Sbjct: 122 RPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYT 181

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           +L+ G  K   M++A  L   +  + +KP  VTY + I G CK G +E+A KL  +M   
Sbjct: 182 SLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM--G 239

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG--YCRSGDAS 362
           K+    + + I   GY   G + EA  L  EMV KG+   +     +I G  Y R  D  
Sbjct: 240 KMCAAEVLHCIF-GGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRND-- 296

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL----------- 411
           +A E    MV +G  PD+ +Y  +++ F ++  M  A  +V  M+  GL           
Sbjct: 297 EAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLM 356

Query: 412 ------------------------VPDVITYNVILTGFCRQGRMHDSELILWRMIEK-GL 446
                                    P ++TYN+++ G C+ G+  D+ L+L  M E+ G+
Sbjct: 357 DGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGI 416

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            P   +Y TLI+G        EA     EM+  G VPD
Sbjct: 417 VPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPD 454



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 192/385 (49%), Gaps = 5/385 (1%)

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
           D A+YN ++   C     S A E+  EM   G+    V+   ++       ++D+AL YF
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
             +     + D V YT +I G   +G +  A ++ +EM   G    VV Y  I+N L +A
Sbjct: 63  HSVSPRSDL-DVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQC-VVAYTAIINALFKA 120

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
               +A   F  M+ R   PD  TFT +I G CK G +N+A  +F  M +K  KPDI+ Y
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVY 180

Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
            +L+DG  K   M++A KL  +++SR + P  ++Y   I+G C  G V EA +L  EM G
Sbjct: 181 TSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM-G 239

Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
           K     ++ C  I  GY   G   +A     +MV +GV  D   Y  LI+G       D+
Sbjct: 240 KMCAAEVLHC--IFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDE 297

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  +   M  QG VPD  TY +I++ FC+QG+M  +  ++  M   GL  +   Y +L++
Sbjct: 298 AQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMD 357

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVP 483
           G +  N  +EA   +  ML++   P
Sbjct: 358 GFLGVNRAREAINVYSTMLRKMVKP 382



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 144/283 (50%), Gaps = 5/283 (1%)

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           ++DV +YN ++ GLC A   + A +L  EM   G+     T   ++   C+   +++AL+
Sbjct: 1   MLDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALS 60

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
            F  ++ +S   D+V+Y TLI G    G ++ A +L+ +M S   S   ++Y  +IN   
Sbjct: 61  YFHSVSPRS-DLDVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALF 118

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
                 +A   +  MV +   P L +   +I G C++G  ++A E   +M  +G  PD I
Sbjct: 119 KAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDII 178

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
            Y +L++G  +   MD+A  L+ ++ ++G+ P  +TY   ++G C+ GR+ ++  ++  M
Sbjct: 179 VYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM 238

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              G          +  G+V +  ++EA    DEM+++G   D
Sbjct: 239 ---GKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLD 278



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 1/243 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D A+     M ++G  PDT TY  +++ +C++G ++ A +++  M   GL+     YNSL
Sbjct: 296 DEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSL 355

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR-G 130
           ++G     R   A  V   ML+  + P   TYN L++  C+    ++A  +  EM  R G
Sbjct: 356 MDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDG 415

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + P IVS+ TLI    + G+ D A+  F EM   G+VPD    T +I        + EA 
Sbjct: 416 IVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEAT 475

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++  +M   G   D + YN ++  LC    +  A D+  EM++    PD  TF  +  G 
Sbjct: 476 QLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGF 535

Query: 251 CKD 253
             D
Sbjct: 536 KAD 538



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 2/212 (0%)

Query: 274 DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLW 333
           D+ +YN +I G C  G   +A +L  +M +  I  + +++GI++   C    V +A   +
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALS-Y 61

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           +  V       +VS  T+I G   SG    A E   +M S G     ++Y  +IN   + 
Sbjct: 62  FHSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKA 120

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
              D+A A   +M  +   PD+ T+ V++TG C+ G+++ +  +   M  KG  PD   Y
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVY 180

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           T+L++G    + + EA +   E++ RG  P +
Sbjct: 181 TSLVDGLSKASMMDEARKLLQEIVSRGMKPTE 212


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 247/473 (52%), Gaps = 9/473 (1%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K+ +A   L  M++ GV P     NT I    + G LE+A + +  M   G+KP + TYN
Sbjct: 250 KLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYN 309

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR- 128
           SLI G C   R + A E++  +   G  PD  +Y T++   C+++ +   EE+ C M + 
Sbjct: 310 SLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI---EEVKCLMEKM 366

Query: 129 ---RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
                + PD V+++TLI + S++G  D AL + +E +  G   D V Y+ I++ +C+ G 
Sbjct: 367 VWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGR 426

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + EA  +  +M  +GC  DVVTY  I++G CR   + EA  +  +M + G  P+  ++T 
Sbjct: 427 MDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTA 486

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L++G C  G   +A  + ++  +    P+ +TY  ++ G  + G++ +A  L  +M+ + 
Sbjct: 487 LLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKG 546

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P  +   +LI   C    V EA +   E + KG    +V+  T+I G+C+ GD   A 
Sbjct: 547 FFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAAL 606

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
             L  M   G  PD+++Y  L +   ++  +D+A  L+ KM ++GL P  +TY  ++  +
Sbjct: 607 SVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRY 666

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            + GR+ D   +L +M+++   P R+ Y  +I       NL+EA +   ++L+
Sbjct: 667 SQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLR 717



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 253/480 (52%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L K      A+  L  M ++G+      +  ++ +Y R G L  A +++  M   G
Sbjct: 206 MLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAG 265

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +   N+ I  L K G+ ++A + L+ M   G+ PD  TYN+L+   C    + +A 
Sbjct: 266 VEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 325

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK-SAGLVPDNVLYTIIING 179
           E+   +  +G  PD VS+ T++G   +  +++       +M  ++ L+PD V Y  +I+ 
Sbjct: 326 ELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHM 385

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++G   +AL    E  +KG  +D V Y+ I++  C+   + EA  L  +M  RG  PD
Sbjct: 386 LSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPD 445

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T ++ G C+ G +++A  +   M +   KP+ V+Y  L++G C  G+  +A ++  
Sbjct: 446 VVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 505

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                  +PN I+YG +++G    G ++EA  L  EMV KG  PT V  N +I+  C++ 
Sbjct: 506 VSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 565

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A ++L + +++G   + +++ T+I+GF +  +M+ A +++  M   G  PD +TY 
Sbjct: 566 KVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYT 625

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +     ++GR+ ++  ++ +M+ KGL+P   TY ++I+ +     + +     ++ML+R
Sbjct: 626 ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR 685



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 242/516 (46%), Gaps = 38/516 (7%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  L K  K++ A  FL  M+  G+ PD VTYN+LI  YC    +E+A +L+  +  KG 
Sbjct: 277 IYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGC 336

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLL------------- 107
            P   +Y +++  LCK+ + +  K ++++M+    L PD  TYNTL+             
Sbjct: 337 PPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDAL 396

Query: 108 ---------------------VES-CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                                V S C+K  M EA+ +  +M  RG  PD+V+++ ++  F
Sbjct: 397 AFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGF 456

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G++D A    ++M   G  P+ V YT ++NG C +G  LEA +M +   E     + 
Sbjct: 457 CRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNA 516

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TY  +++GL R   L+EA DL  EM+E+G FP       LI   C++  + +A    + 
Sbjct: 517 ITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEE 576

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
              K    ++V + T+I GFC++G+ME A  +  DM      P+ ++Y  L +     G 
Sbjct: 577 CLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGR 636

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA  L  +M+ KG+ PT V+  ++I  Y + G        L KM+     P    YN 
Sbjct: 637 LDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQ 694

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I       N+++A  L+ K+       D  T +V++  + ++G    +  +  RM  + 
Sbjct: 695 VIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRN 754

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L PD      +    V    L EA       ++RG 
Sbjct: 755 LTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGI 790



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 211/419 (50%), Gaps = 1/419 (0%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            Y ++++ L K   C  A+ VL  M + G+      +  ++V   R   +  A  +   M
Sbjct: 202 VYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLM 261

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            + GV P +   +T I +  + G+L++AL +   M+  G+ PD V Y  +I GYC    +
Sbjct: 262 QKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRI 321

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-ERGVFPDFYTFTT 245
            +AL++   +  KGC  D V+Y T++  LC+ K + E   L  +M+    + PD  T+ T
Sbjct: 322 EDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNT 381

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LIH   K G+ + AL        K    D V Y+ ++  FC+ G M++A  L  DM SR 
Sbjct: 382 LIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRG 441

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
            +P+ ++Y  +++G+C +G + EA ++  +M   G KP  VS   ++ G C SG + +A 
Sbjct: 442 CNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 501

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E ++        P++I+Y  +++G  RE  + +A  L  +M  +G  P  +  N+++   
Sbjct: 502 EMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSL 561

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+  ++ +++  L   + KG   +   +TT+I+G     +++ A    D+M   G  PD
Sbjct: 562 CQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPD 620



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 191/379 (50%), Gaps = 2/379 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K    D A  FL E + KG + D V Y+ +++++C++G ++EA  L+  M  +G
Sbjct: 382 LIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRG 441

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY ++++G C+ GR D AK++L +M + G  P+T +Y  LL   C      EA 
Sbjct: 442 CNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 501

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+          P+ +++  ++    R G+L  A    REM   G  P  V   ++I   
Sbjct: 502 EMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSL 561

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+N  V+EA K  +E L KGC ++VV + T+++G C+   +  A  + ++M   G  PD 
Sbjct: 562 CQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDA 621

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T L     K G +++A  L   M  K + P  VTY ++I  + + G ++    L   
Sbjct: 622 VTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEK 681

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+ R+  P    Y  +I   C  G++ EA +L  +++    K    +C+ +++ Y + G 
Sbjct: 682 MLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGV 739

Query: 361 ASKADEFLSKMVSEGVDPD 379
           A  A +   +M    + PD
Sbjct: 740 AISAYKVACRMFRRNLTPD 758



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 1/290 (0%)

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           V+Y  +++   +      A ++   M  +G       +  ++    RA  L  A  +   
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           M + GV P      T I+   K G + KAL   + M    IKPDIVTYN+LI G+C +  
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV-GKGIKPTLVSCN 349
           +E A +L A + S+   P+ +SY  ++   C    + E   L  +MV    + P  V+ N
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           T+I    + G A  A  FL +   +G   D + Y+ +++ F ++  MD+A +LV  M ++
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           G  PDV+TY  I+ GFCR GR+ +++ IL +M + G  P+  +YT L+NG
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNG 490



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 141/280 (50%), Gaps = 1/280 (0%)

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           V Y T+L+ L + K+   A  +   M  RG+      F  ++  + + G +  AL +  +
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +  ++P +   NT I    K G++EKA K    M    I P+ ++Y  LI GYC +  
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDSISYN 384
           + +A  L   +  KG  P  VS  T++   C+     +    + KMV +  + PD ++YN
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLI+   +  + D A A + + +++G   D + Y+ I+  FC++GRM +++ ++  M  +
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G NPD  TYT +++G      + EA +   +M + G  P+
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPN 480



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 68/203 (33%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ +LC++ K+  AK +L E   KG   + V + T+I+ +C+ G +E A  +++ M   G
Sbjct: 557 LIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSG 616

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTAT------------------ 102
             P   TY +L + L KKGR D A E++ +ML  GL P   T                  
Sbjct: 617 KHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDML 676

Query: 103 ---------------YNTLLVESCRKENMSEAEEIF------------------------ 123
                          YN ++ + C   N+ EAE++                         
Sbjct: 677 NLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLK 736

Query: 124 -----------CEMSRRGVAPDI 135
                      C M RR + PD+
Sbjct: 737 KGVAISAYKVACRMFRRNLTPDL 759


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 235/441 (53%), Gaps = 2/441 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K   +  A     E    G   D  TY T+++   +   ++EA  LM  ++  G
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TYN+L+NGLCK GR + A ++L +++  G +PD  TY +L+    +K+   EA 
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM+ RG+A D V ++ LI    + G++ +A   ++ M S G VPD V  + +I+G 
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G +  A+++   M  +G   + V Y+ +++GLC+A+ +  A ++  +M +    PD 
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G CK G++  A   FD M +   KPD+ TYN LI GFCK G  + A  ++ D
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S + SPN ++YG LI+G C    +T+A   +  M  +G  P     ++++ G C+SG 
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
                    +M   GV  +S +   LI    +   +D+A +L + +  +G+ P    YN 
Sbjct: 365 LEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNS 422

Query: 421 ILTGFCRQGRMHDSELILWRM 441
           I++   + G++++ + +   M
Sbjct: 423 IISALIKSGKVNEGQAVYQEM 443



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 225/445 (50%), Gaps = 2/445 (0%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           T++ LIN   + G L +A  L    +  G    + TY ++++ L K  +   A  +++++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              G +P  ATYN LL   C+   + EA ++  ++   G  PD+V++++LI    +  + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
             A   F+EM S GL  D V YT +I G  + G + +A  +   M  +GCV DVVT +T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++GLC+A  +  A  +F  M  RG+ P+   ++ LIHG CK   M+ AL +   M +   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            PD +TYN LIDG CK G++  A   + +M+     P+  +Y ILI+G+C  G+   A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           ++ +M      P +V+  T+I G C+    +KA  +   M   G  PDS  Y++L++G  
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   ++    L  +ME  G V +  T   ++   C+  R+ D  + L+  I K   P   
Sbjct: 361 KSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRV-DEAVSLFNAIRKEGMPHPY 418

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEM 476
            Y ++I+  +    + E    + EM
Sbjct: 419 AYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 202/379 (53%)

Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
           T++ L+    +   + +A  +  E +  G   DI +++T++   ++N ++  A+    ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
            + G  P    Y  ++NG C+ G + EA+ +  ++++ GC  DVVTY ++++GL + K  
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
            EA  LF EM  RG+  D   +T LI G  + G + +A +++  MT +   PD+VT +T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
           IDG CK G +  A +++  M +R ++PN + Y  LI+G C    +  A  +  +M     
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
            P  ++ N +I G C+SGD + A  F  +M+  G  PD  +YN LI+GF +  N D A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
           +   M +    P+V+TY  +++G C++ ++  + L    M E+G  PD   Y++L++G  
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 462 SQNNLKEAFRFHDEMLQRG 480
               L+      DEM + G
Sbjct: 361 KSGKLEGGCMLFDEMERSG 379



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 181/349 (51%)

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           +FS LI    + G L +A    +E  + G   D   YT I++   +N  + EA+ + +++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
              GC   + TYN +LNGLC+   L EA DL  ++++ G  PD  T+T+LI G  K    
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            +A  LF  M  + +  D V Y  LI G  + G++ +A+ ++  M S+   P+ ++   +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+G C  G +  A R++  M  +G+ P  V  + +I G C++     A E L++M     
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD+I+YN LI+G  +  ++  A A   +M   G  PDV TYN++++GFC+ G    +  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +   M     +P+  TY TLI+G   +  L +A  ++  M +RG  PD 
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDS 349


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 240/461 (52%), Gaps = 18/461 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++  LC + K + A   +  M + G    P+ V+Y T+I+ + +EG + +A+ L   M  
Sbjct: 221 LLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLD 280

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G+ P V T NS+I+GLCK    D+A+ VL +M+   + P+  TYN+L+         +E
Sbjct: 281 HGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTE 340

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A  I  EMSR G  P++V++S LI    ++G    A   F  M  +G  P+   Y  +++
Sbjct: 341 AVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLH 400

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GY   G +++   ++D M++ G       +N  +   C+   L EA   FN+M ++G  P
Sbjct: 401 GYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMP 460

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D   +TT+I G CK G ++ A++ F  M    + PDI+T+NTLI GF   G+ EKA +L+
Sbjct: 461 DIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELF 520

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M+ R I PN  ++  +I+     G VTEA +L+  M   G KP +VS NT+I GY  +
Sbjct: 521 YEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIA 580

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  +  + L  M+  G+ P ++++NTL++G V                + GL PDV+T 
Sbjct: 581 GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV----------------SMGLKPDVVTC 624

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
             ++   C  GR+ D   +   M+ K    D  T    + G
Sbjct: 625 KTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRG 665



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 251/483 (51%), Gaps = 19/483 (3%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
           ++  LC + +  D+  + L  M + G  PD  +Y TL+   C E   EEA +L++ M+  
Sbjct: 185 LLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAED 244

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G    P V +Y ++I+G  K+G   +A  +  +ML  G+ P+  T N+++   C+ + M 
Sbjct: 245 GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 304

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +AE +  +M    + P+  ++++LI  +  +GQ   A+   +EM   G  P+ V Y+++I
Sbjct: 305 KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLI 364

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +  C++G   EA ++ + M++ G   +  TY ++L+G      L + +++ + M++ G+ 
Sbjct: 365 DCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMR 424

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P  + F   I+ +CK G +++A   F+ M Q+   PDIV Y T+IDG CK+G ++ A   
Sbjct: 425 PGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSR 484

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           +  MI   +SP+ I++  LI+G+   G   +A  L+YEM+ +GI P + + N++I    +
Sbjct: 485 FCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFK 544

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G  ++A +    M   G  P+ +SYNT+I+G+     + +   L+  M   GL P  +T
Sbjct: 545 EGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVT 604

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           +N +L G                M+  GL PD  T  TLI+       +++      EML
Sbjct: 605 FNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREML 648

Query: 478 QRG 480
            + 
Sbjct: 649 GKA 651



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 248/448 (55%), Gaps = 3/448 (0%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGKGLKPGVFTYNSLINGLC 76
           L ++ + G+    VT+  L+   C E    +A  + +  M   G  P VF+Y +L+ GLC
Sbjct: 167 LGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLC 226

Query: 77  KKGRCDRAKEVLDEMLQMG--LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPD 134
            + +C+ A E++  M + G    P+  +Y T++    ++ ++ +A  +FC+M   G+ P+
Sbjct: 227 AEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPN 286

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
           +V+ +++I    +   +D+A    ++M    ++P+   Y  +I+GY  +G   EA+++  
Sbjct: 287 VVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILK 346

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM   G   +VVTY+ +++ LC++ +  EA ++FN M++ G  P+  T+ +L+HG+  +G
Sbjct: 347 EMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEG 406

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
           N+    N+ D+M Q  ++P    +N  I  +CK G +++A+  +  M  +   P+ ++Y 
Sbjct: 407 NLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYT 466

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            +I+G C +G + +A   + +M+  G+ P +++ NT+I G+   G   KA+E   +M+  
Sbjct: 467 TVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDR 526

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
           G+ P+  ++N++I+   +E  + +A  L   M   G  P+V++YN ++ G+   G + + 
Sbjct: 527 GIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEV 586

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVS 462
             +L  M+  GL P   T+ TL++G VS
Sbjct: 587 MKLLDDMLLIGLKPTAVTFNTLLDGMVS 614



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 243/487 (49%), Gaps = 5/487 (1%)

Query: 2   VNALCKDHKIDSAKMF--LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           V++  +D    +  MF  +     K V PD  T+  LI+  C  G L   F  +  +   
Sbjct: 114 VSSSVRDGPALAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKT 173

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKE-VLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           GL+    T+  L+  LC + R   A   VL  M ++G +PD  +Y TLL   C ++   E
Sbjct: 174 GLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEE 233

Query: 119 AEEIFCEMSRRG--VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
           A E+   M+  G    P++VS++T+I  F + G + +A   F +M   G+ P+ V    +
Sbjct: 234 AAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSV 293

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I+G C+   + +A  +  +M+++  + +  TYN++++G   +   TEA  +  EM   G 
Sbjct: 294 IDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ 353

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P+  T++ LI   CK G   +A  +F+ M Q   KP+  TY +L+ G+   G +   N 
Sbjct: 354 RPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNN 413

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +   M+   + P    + I I  YC  G + EA   + +M  +G  P +V+  T+I G C
Sbjct: 414 VKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLC 473

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           + G    A     +M+ +G+ PD I++NTLI+GF      +KA  L  +M ++G+ P+V 
Sbjct: 474 KIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVN 533

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           T+N ++    ++G++ ++  +   M   G  P+  +Y T+I+G+     + E  +  D+M
Sbjct: 534 TFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 593

Query: 477 LQRGFVP 483
           L  G  P
Sbjct: 594 LLIGLKP 600



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 230/438 (52%), Gaps = 3/438 (0%)

Query: 50  FQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVE 109
           F  M     K + P + T+  LI+  C  G  +     L ++++ GL     T+  LL  
Sbjct: 129 FNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRT 188

Query: 110 SCRKENMSEAEEIFCE-MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG--L 166
            C ++  S+A  I    M   G  PD+ S++TL+       + + A      M   G   
Sbjct: 189 LCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNC 248

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            P+ V YT +I+G+ + G V +A  +  +ML+ G   +VVT N++++GLC+ + + +A+ 
Sbjct: 249 PPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEA 308

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           +  +M++  + P+  T+ +LIHG+   G   +A+ +   M++   +P++VTY+ LID  C
Sbjct: 309 VLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLC 368

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G   +A +++  MI     PN  +YG L++GY + G++ +   +   MV  G++P   
Sbjct: 369 KSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRH 428

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
             N  I  YC+ G   +A    +KM  +G  PD ++Y T+I+G  +   +D A +   +M
Sbjct: 429 VFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQM 488

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
            + GL PD+IT+N ++ GF   G+   +E + + M+++G+ P+ +T+ ++I+    +  +
Sbjct: 489 IDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKV 548

Query: 467 KEAFRFHDEMLQRGFVPD 484
            EA +  D M + G  P+
Sbjct: 549 TEARKLFDLMPRAGAKPN 566



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 29/59 (49%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           M   G+ PD VT  TLI++ C +G +E+   L   M GK  K    T N  + G+  K 
Sbjct: 612 MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVTVKA 670


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 219/390 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  CK  ++  A+  L EM + GV  + + YN+L++AY RE   +   +++  M  +G
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY  L++GL       + + V +EM    LS D   Y++++   CR  N+  A 
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F E    G+ P+  ++  LI  F + GQ++ A M   +M+  G+  + +++  +I+GY
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   V +AL+++  M + G  +DV TYNT+  GL RA  + EA +L   M+E+GV P+ 
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 388

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++TTLI  HC +G+M +A  LF  M     +P +VTYN ++DG+ K G + +A +   +
Sbjct: 389 VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKE 448

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+  SY  L++G+C  G V  A RL+ EM  +G KP LV+   +I G  + G 
Sbjct: 449 MEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGR 508

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           + +A +    M+ +G+ PD   Y+ L+   
Sbjct: 509 SEEAFQLYDNMLGDGLTPDDALYSALVGSL 538



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 213/387 (55%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +++G CK GR   A+++LDEM + G+  +   YN+LL    R+++     E+   M   G
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + P + +++ L+   S    + +    F EMKS  L  D   Y+ +IN YCR G V  A 
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++ DE +  G   +  TY  ++NG C+   +  A+ L  +M  RGV  +   F T+I G+
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+   ++KAL +  IM +  I+ D+ TYNTL  G  +   M++A  L   MI + + PN+
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 388

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +SY  LI+ +C+ G + EA RL+ EM G G +P+LV+ N ++ GY + G   +A+ F  +
Sbjct: 389 VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKE 448

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  +G+ PD  SY  L++G      +D A  L  +M+ +G  P+++ Y  +++G  ++GR
Sbjct: 449 MEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGR 508

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLI 457
             ++  +   M+  GL PD + Y+ L+
Sbjct: 509 SEEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 212/398 (53%), Gaps = 3/398 (0%)

Query: 28  PDTVT---YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           PD+VT    + +++ YC+ G +  A QL++ M   G+K     YNSL++   ++   DR 
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            E+L  M   G+ P   TY  L+       ++++ E +F EM  + ++ D+  +S++I  
Sbjct: 198 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 257

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + R G + RA   F E    G+ P+   Y  +ING+C+ G +  A  +  +M  +G  ++
Sbjct: 258 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 317

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            + +NT+++G CR  M+ +A ++   M + G+  D YT+ TL  G  +   M++A NL  
Sbjct: 318 QIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLR 377

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           IM +K ++P+ V+Y TLI   C  G+M +A +L+ +M      P+ ++Y ++++GY   G
Sbjct: 378 IMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKG 437

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA R   EM  KG+ P + S   ++ G+C +G    A     +M   G  P+ ++Y 
Sbjct: 438 SIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYT 497

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            LI+G  +E   ++AF L   M   GL PD   Y+ ++
Sbjct: 498 ALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 235/464 (50%), Gaps = 11/464 (2%)

Query: 30  TVTYNTLINAYCREGFLEEA---FQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE 86
           T  Y+ L  AY   G    A   F+L  S  G GL P   T + L       G  D A +
Sbjct: 72  TAFYDMLFRAYADSGAAARAAEAFELTVSRLG-GLDPRSLTSSLLSLRRA--GHLDTAAD 128

Query: 87  VLDEMLQMGLSPDTAT--YNTLLVES-CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           +L +       PD+ T    +++V+  C+   ++ A ++  EM R GV  + + +++L+ 
Sbjct: 129 LLKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLD 186

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            ++R    DR     + M++ G+ P    YTI+++G      + +   + +EM  K    
Sbjct: 187 AYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSG 246

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           DV  Y++++N  CRA  +  A ++F+E +  G+ P+ +T+  LI+G CK G M  A  L 
Sbjct: 247 DVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLV 306

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M  + +  + + +NT+IDG+C+   ++KA ++   M    I  +  +Y  L  G    
Sbjct: 307 TDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRA 366

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             + EA  L   M+ KG++P  VS  T+I  +C  GD  +A     +M   G +P  ++Y
Sbjct: 367 NRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTY 426

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N +++G++++ ++ +A     +ME +GLVPD+ +Y  ++ G C  G++  +  +   M +
Sbjct: 427 NVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQ 486

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           +G  P+   YT LI+G   +   +EAF+ +D ML  G  PDDA 
Sbjct: 487 RGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDAL 530



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 151/257 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++++A+M + +M+ +GV  + + +NT+I+ YCR+  +++A ++   M   G
Sbjct: 289 LINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMG 348

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V+TYN+L  GL +  R D AK +L  M++ G+ P+  +Y TL+   C + +M EA 
Sbjct: 349 IELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEAR 408

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+  G  P +V+++ ++  + + G +  A  + +EM+  GLVPD   Y  +++G+
Sbjct: 409 RLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGH 468

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C NG V  AL++ +EM ++G   ++V Y  +++GL +     EA  L++ ML  G+ PD 
Sbjct: 469 CVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDD 528

Query: 241 YTFTTLIHGHCKDGNMN 257
             ++ L+     D   N
Sbjct: 529 ALYSALVGSLHTDKKQN 545


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 243/480 (50%), Gaps = 3/480 (0%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C+ H +     F  +M    V P+  ++N LI+  C +G L++A  ++  M   G  P +
Sbjct: 154 CRAHLV---WXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTI 210

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            +YN+L++  CKKGR   A  ++  M   G+  D  TYN  +   CR    ++   +  +
Sbjct: 211 VSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKK 270

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  + + P+ VS++TLI  F + G++  A   F EM    L P+ + Y I+INGYC NG 
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGN 330

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
             EAL++ D M       + VT  T+LNGL ++     A ++           +  + T 
Sbjct: 331 FEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTV 390

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           +I G C++G +++A  L   M +  + PDI+T++ LI+GFCKVG + KA ++ + +    
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREG 450

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             PN + +  LI   C +G+V E  + +  M   G      +CN+++   C +G   +A+
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAE 510

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           EFL  +   G+ P+S++++ +ING+    +   AF++  KM + G  P   TY  +L   
Sbjct: 511 EFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVL 570

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C+     ++  +L ++    L  D  +Y TLI       NL EA R  +EM+Q   +PD 
Sbjct: 571 CKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDS 630



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 236/462 (51%), Gaps = 4/462 (0%)

Query: 27  YP----DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           YP    +   ++ LI  Y R+G +  A    +SM  +G KP V+T N ++  + K  R  
Sbjct: 98  YPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAH 157

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
                  +ML   + P+ +++N L+   C +  + +A  I   M R G  P IVS++TL+
Sbjct: 158 LVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLL 217

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               + G+   AL+    M+  G+  D   Y + I+  CRN    +   +  +M  K   
Sbjct: 218 SWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMIT 277

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            + V+YNT++NG  +   +  A  +FNEM+E  + P+  T+  LI+G+C +GN  +AL L
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRL 337

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            D+M    ++P+ VT  TL++G  K  + + A  +       + S N IS+ ++I+G C 
Sbjct: 338 LDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCR 397

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G + EAF+L  EM   G+ P +++ + +I G+C+ G+ +KA E +SK+  EG  P+++ 
Sbjct: 398 NGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVI 457

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           ++TLI    +  N+ +     + M   G   D  T N ++   C  G++ ++E  L  + 
Sbjct: 458 FSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHIS 517

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             GL P+  T+  +ING+ +  +   AF   D+M+  G  P 
Sbjct: 518 RIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPS 559



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 247/479 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC   K+  A   L  ME+ G  P  V+YNTL++  C++G  + A  L++ M  KG
Sbjct: 181 LISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKG 240

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V TYN  I+ LC+  R  +   VL +M    ++P+  +YNTL+    ++  +  A 
Sbjct: 241 IQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVAT 300

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM    ++P++++++ LI  +  NG  + AL     M++  + P+ V    ++NG 
Sbjct: 301 RVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGL 360

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++     A  + +        ++ +++  +++GLCR  +L EA  L  EM + GV+PD 
Sbjct: 361 YKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDI 420

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ LI+G CK GN+NKA  +   + ++   P+ V ++TLI   CKVG + +  K +A 
Sbjct: 421 ITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAA 480

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     + +  +   L+   C  G + EA    + +   G+ P  V+ + II GY   GD
Sbjct: 481 MNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGD 540

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S A     KM+S G  P   +Y +L+    + +N  +A  L+ K+    L  D I+YN 
Sbjct: 541 GSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNT 600

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           ++    + G + ++  +   MI+  + PD  TYT +++G + +  L  AF F   ++Q+
Sbjct: 601 LIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQK 659



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 243/485 (50%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   K+ KI  A     EM +  + P+ +TYN LIN YC  G  EEA +L++ M    
Sbjct: 286 LINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEAND 345

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   T  +L+NGL K  + D A+ +L+       S +  ++  ++   CR   + EA 
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAF 405

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM + GV PDI++FS LI  F + G L++A     ++   G VP+NV+++ +I   
Sbjct: 406 QLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V E +K    M   G   D  T N+++  LC    L EA++  + +   G+ P+ 
Sbjct: 466 CKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  +I+G+   G+ + A ++FD M      P   TY +L+   CK     +A KL   
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    ++ + ISY  LI      G++ EA RL+ EM+   I P   +   I+ G  R G 
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645

Query: 361 ASKADEFLSK-MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A  FL + M  E +  +SI Y   I+G  +      A  L  +ME +GL  D+I  N
Sbjct: 646 LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALN 705

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            I  G+ R G++  +  ++ +   K + P+ +T+  L++G+    ++   F+ ++ M + 
Sbjct: 706 SITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRS 765

Query: 480 GFVPD 484
           GF P+
Sbjct: 766 GFFPN 770



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 251/557 (45%), Gaps = 71/557 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K D A+  L          + +++  +I+  CR G L+EAFQL+  M   G
Sbjct: 356 LLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDG 415

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + T++ LING CK G  ++AKEV+ ++ + G  P+   ++TL+  SC+  N+ E  
Sbjct: 416 VYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGM 475

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + +  M+  G   D  + ++L+     NG+L  A  +   +   GLVP++V +  IINGY
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGY 535

Query: 181 CRNGFVLEALKMRDEMLEKG--------------------------------CV---MDV 205
              G    A  + D+M+  G                                C+   +D 
Sbjct: 536 ANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM--------- 256
           ++YNT++  + ++  L EA  LF EM++  + PD YT+T ++ G  ++G +         
Sbjct: 596 ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGR 655

Query: 257 ---------------------------NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                                        AL LF  M +K +  D++  N++ DG+ ++G
Sbjct: 656 LMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMG 715

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           ++  A+ L +   ++ + PN  ++ IL++GY     +   F+L+  M   G  P  ++ +
Sbjct: 716 KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYH 775

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           ++I G C  G      + L   ++E    D +++N LI       ++DK   L   ME  
Sbjct: 776 SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            +  D  T   +     R+    +  + +  M++KG  P    Y T++       +++ A
Sbjct: 836 RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 470 FRFHDEMLQRGFVPDDA 486
           F+  D+M+  G   DDA
Sbjct: 896 FKLKDQMVALGISLDDA 912



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 253/520 (48%), Gaps = 36/520 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V +LC++ K+  A+ FL  + + G+ P++VT++ +IN Y   G    AF + + M   G
Sbjct: 496  LVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCG 555

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P  FTY SL+  LCK      A+++L ++  + L+ DT +YNTL+VE  +  N+ EA 
Sbjct: 556  HHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAV 615

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF-REMKSAGLVPDNVLYTIIING 179
             +F EM +  + PD  +++ ++    R G+L  A ++  R M+   L  ++++YT  I+G
Sbjct: 616  RLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
              + G    AL +  EM EKG  +D++  N+I +G  R   +  A  L ++   + V P+
Sbjct: 676  LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPN 735

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              TF  L+HG+ +  ++     L+++M +    P+ +TY++LI G C  G +E   K+  
Sbjct: 736  LTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795

Query: 300  DMISRKISPNYISYGILINGYCSMG---------HVTEAFRL------------------ 332
              I+   + + +++ +LI   C +          H  E FR+                  
Sbjct: 796  MFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 333  --------WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
                     +EM+ KG  PT     T++K  CR GD   A +   +MV+ G+  D  +  
Sbjct: 856  VSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAEC 915

Query: 385  TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             ++ G      +++A  ++ +M     +P   T+  ++  FC++    ++  +   M   
Sbjct: 916  AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975

Query: 445  GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +  D   Y  LI+   +  ++  A  F++E+ Q+G +P+
Sbjct: 976  RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPN 1015



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 226/500 (45%), Gaps = 36/500 (7%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK   +     F   M   G   D  T N+L+ + C  G L EA + ++ +S  GL P  
Sbjct: 466 CKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            T++ +ING    G    A  V D+M+  G  P   TY +LL   C+ +N  EA ++  +
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           +    +A D +S++TLI   S++G L  A+  F EM    ++PD+  YT I++G  R G 
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645

Query: 186 VLEALKMRDEMLEKGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
           ++ A      +++K  + ++ + Y   ++GL +A     A  LF EM E+G+  D     
Sbjct: 646 LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALN 705

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           ++  G+ + G +  A +L      K++ P++ T+N L+ G+ +  ++    KL+  M   
Sbjct: 706 SITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRS 765

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              PN ++Y  LI G C+ G +    ++    + +      ++ N +I+  C   D  K 
Sbjct: 766 GFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKV 825

Query: 365 DE-----------------------------------FLSKMVSEGVDPDSISYNTLING 389
            +                                   F+ +M+ +G  P S  Y T++  
Sbjct: 826 IDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKR 885

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             R  ++  AF L  +M   G+  D      ++ G    G++ ++  IL RM+     P 
Sbjct: 886 MCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPT 945

Query: 450 RSTYTTLINGHVSQNNLKEA 469
            ST+TTL++    ++N KEA
Sbjct: 946 TSTFTTLMHVFCKKDNFKEA 965



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 167/349 (47%)

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           F  LI ++ R G +  A+  F  M   G  P      +I+    +N           +ML
Sbjct: 108 FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQML 167

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
                 +V ++N +++ LC    L +A ++   M   G  P   ++ TL+   CK G   
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            AL L   M  K I+ D+ TYN  ID  C+     +   +   M ++ I+PN +SY  LI
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           NG+   G +  A R++ EM+   + P L++ N +I GYC +G+  +A   L  M +  V 
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVR 347

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+ ++  TL+NG  +    D A  ++ +        + I++ V++ G CR G + ++  +
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQL 407

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L  M + G+ PD  T++ LING     NL +A     ++ + GFVP++ 
Sbjct: 408 LIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNV 456



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 147/320 (45%)

Query: 10   KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
            K+ SA   + +   K V P+  T+N L++ Y R   +   F+L N M   G  P   TY+
Sbjct: 716  KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYH 775

Query: 70   SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            SLI GLC  G  +   ++L   +    + D  T+N L+ + C   ++ +  ++   M   
Sbjct: 776  SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 130  GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
             V+ D  +   +  +  R        ++  EM   G +P +  Y  ++   CR G +  A
Sbjct: 836  RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 190  LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             K++D+M+  G  +D      ++ GL     + EA  +   ML     P   TFTTL+H 
Sbjct: 896  FKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHV 955

Query: 250  HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
             CK  N  +A NL  +M    +K DIV YN LI   C  G++  A   + ++  + + PN
Sbjct: 956  FCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPN 1015

Query: 310  YISYGILINGYCSMGHVTEA 329
              +Y +L++   +  +V+  
Sbjct: 1016 MTTYRVLVSAISTKHYVSRG 1035



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 97/187 (51%)

Query: 16   MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL 75
            +F+ EM +KG  P +  Y T++   CR G ++ AF+L + M   G+        +++ GL
Sbjct: 862  VFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGL 921

Query: 76   CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
               G+ + A  +L  ML+M   P T+T+ TL+   C+K+N  EA  +   M    V  DI
Sbjct: 922  ALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDI 981

Query: 136  VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
            V+++ LI     NG +  AL ++ E+K  GL+P+   Y ++++      +V     +  +
Sbjct: 982  VAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKD 1041

Query: 196  MLEKGCV 202
            + ++G V
Sbjct: 1042 LNDRGLV 1048



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            MV  L    KI+ A   L  M +    P T T+ TL++ +C++   +EA  L   M    
Sbjct: 917  MVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYR 976

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +K  +  YN LI+  C  G    A +  +E+ Q GL P+  TY  L+     K  +S  E
Sbjct: 977  VKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGE 1036

Query: 121  EIFCEMSRRGVA 132
             +  +++ RG+ 
Sbjct: 1037 IVLKDLNDRGLV 1048


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 233/450 (51%), Gaps = 3/450 (0%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           ID A      M +    P TV +N L+ +  +         L + M   G+ P ++T + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 71  LINGLCK--KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           LIN  C   +G+   A  + D+M+  G  PD  TY TL+   C+  N S A  +   M +
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           +   P++ +++T+I    ++ Q+  A   F EM + G+ PD   Y  +I+  C       
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-VFPDFYTFTTLI 247
              + +EM++   + DVV++NT+++ LC+   +TEA D+ ++M++RG   P+  ++ TLI
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +G+CK   ++KA+ LF  M ++ + PD VTY+TLI G C V  ++ A  L+ +M++    
Sbjct: 282 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 341

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           PN ++Y IL++  C   ++ EA  L   + G  + P +   N  I G CR+G+   A + 
Sbjct: 342 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 401

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
            S + S+G+ PD  +Y+ +ING  R   +D+A  L  +M+  G   +   YN I  GF R
Sbjct: 402 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 461

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
                 +  +L  M+ +G + D ST T  +
Sbjct: 462 NNETSRAIQLLQEMVARGFSADASTMTLFV 491



 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 230/443 (51%), Gaps = 20/443 (4%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCR--EGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           +M+  G+ P+  T + LIN++C    G + EA  L + M G+G +P V TY +LINGLCK
Sbjct: 86  QMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 145

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
            G    A  +L  M+Q    P+   YNT++   C+   ++EA  +F EM  +G++PDI +
Sbjct: 146 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 205

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           +++LI       +         EM  + ++PD V +  +++  C+ G V EA  + D+M+
Sbjct: 206 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 265

Query: 198 EK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           ++ GC+ +V++YNT++NG C+ + + +A  LF EM  + + PD  T++TLIHG C    +
Sbjct: 266 QRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 325

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
             A+ LF  M   S  P++VTY  L+D  CK   + +A  L   +    + P+     I 
Sbjct: 326 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 385

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+G C  G +  A  L+  +  KG++P + + + +I G CR G   +A +   +M   G 
Sbjct: 386 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC 445

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV---------------- 420
             +   YNT+  GF+R     +A  L+ +M  +G   D  T  +                
Sbjct: 446 TLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQ 505

Query: 421 ILTGFCRQGR-MHDSELILWRMI 442
           IL  FC+Q   ++++ ++L  +I
Sbjct: 506 ILRDFCKQKSWIYENVMVLQEII 528



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/405 (33%), Positives = 222/405 (54%), Gaps = 8/405 (1%)

Query: 1   MVNALCKDH--KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           ++N+ C  +  KI  A     +M  +G  PD VTY TLIN  C+ G    A +L+ SM  
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
           K  +P VF YN++I+ LCK  +   A  +  EM+  G+SPD  TYN+L+   C       
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIII 177
              +  EM    + PD+VSF+T++    + G++  A     +M +  G +P+ + Y  +I
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NGYC+   + +A+ +  EM  +  + D VTY+T+++GLC  + L +A  LF+EM+     
Sbjct: 282 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 341

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  T+  L+   CK+  + +A+ L   +   ++ PDI   N  IDG C+ GE+E A  L
Sbjct: 342 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 401

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC--NTIIKGY 355
           ++++ S+ + P+  +Y I+ING C  G + EA +L+ EM   G   TL  C  NTI +G+
Sbjct: 402 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC--TLNGCIYNTITRGF 459

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
            R+ + S+A + L +MV+ G   D+ S  TL    + ++ +D++ 
Sbjct: 460 LRNNETSRAIQLLQEMVARGFSADA-STMTLFVKMLSDDGLDQSL 503



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 224/441 (50%), Gaps = 38/441 (8%)

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           D A    + ML+M   P T  +N LL    + ++ S    +  +M   G+ P+I +   L
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 142 IGIFSR--NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           I  F     G++  AL  F +M   G  PD V Y  +ING C+ G    A+++   M++K
Sbjct: 103 INSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 162

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG--------H- 250
            C  +V  YNTI++ LC+ + +TEA +LF+EM+ +G+ PD +T+ +LIH         H 
Sbjct: 163 NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV 222

Query: 251 --------------------------CKDGNMNKALNLFDIMTQKS-IKPDIVTYNTLID 283
                                     CK+G + +A ++ D M Q+    P++++YNTLI+
Sbjct: 223 ATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLIN 282

Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           G+CK+  ++KA  L+ +M  +++ P+ ++Y  LI+G C +  + +A  L++EMV     P
Sbjct: 283 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 342

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
            LV+   ++   C++   ++A   L  +    +DPD    N  I+G  R   ++ A  L 
Sbjct: 343 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 402

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           S + ++GL PDV TY++++ G CR+G + ++  +   M E G   +   Y T+  G +  
Sbjct: 403 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 462

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
           N    A +   EM+ RGF  D
Sbjct: 463 NETSRAIQLLQEMVARGFSAD 483



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 203/429 (47%), Gaps = 38/429 (8%)

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           +ML +     + ++N    +S     +  A   F  M R    P  V F+ L+   ++  
Sbjct: 16  QMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMK 75

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCR--NGFVLEALKMRDEMLEKGCVMDVVT 207
                L    +M S G+ P+     I+IN +C    G + EAL + D+M+ +G   DVVT
Sbjct: 76  HHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVT 135

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T++NGLC+    + A  L   M+++   P+ + + T+I   CKD  + +A NLF  M 
Sbjct: 136 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 195

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
            K I PDI TYN+LI   C + E +    L  +M+  KI P+ +S+  +++  C  G VT
Sbjct: 196 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 255

Query: 328 EAFRLWYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           EA  +  +M+ + G  P ++S NT+I GYC+     KA     +M  + + PD+++Y+TL
Sbjct: 256 EAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 315

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITY---------------------------- 418
           I+G    E +  A AL  +M     +P+++TY                            
Sbjct: 316 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 375

Query: 419 -------NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
                  N+ + G CR G +  +  +   +  KGL PD  TY+ +ING   +  L EA +
Sbjct: 376 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 435

Query: 472 FHDEMLQRG 480
              EM + G
Sbjct: 436 LFREMDENG 444



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 154/306 (50%), Gaps = 1/306 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC   +       L EM    + PD V++NT+++A C+EG + EA  +++ M  +G
Sbjct: 209 LIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 268

Query: 61  -LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P V +YN+LING CK  R D+A  +  EM +  L PDT TY+TL+   C  E + +A
Sbjct: 269 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 328

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EM      P++V++  L+    +N  L  A+   + ++ + L PD  +  I I+G
Sbjct: 329 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 388

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR G +  A  +   +  KG   DV TY+ ++NGLCR  +L EA  LF EM E G   +
Sbjct: 389 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 448

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              + T+  G  ++   ++A+ L   M  +    D  T    +      G  +   ++  
Sbjct: 449 GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 508

Query: 300 DMISRK 305
           D   +K
Sbjct: 509 DFCKQK 514



 Score = 42.0 bits (97), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 4/108 (3%)

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           S+S+N   +  +    +D A +  ++M      P  + +N +LT   +  + H + L L 
Sbjct: 26  SLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKM-KHHSTLLSLS 84

Query: 440 RMIEK-GLNPDRSTYTTLING--HVSQNNLKEAFRFHDEMLQRGFVPD 484
             ++  G+ P+  T   LIN   H+++  + EA    D+M+  GF PD
Sbjct: 85  HQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPD 132


>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 727

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 247/468 (52%), Gaps = 3/468 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EME +G++P+  T++ +I+ Y   G +E A +       +     V  Y+S+I+  CK G
Sbjct: 183 EMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAG 242

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR---GVAPDIV 136
             +RA+ ++ +M + GL      YN L+    R    ++   +F ++  R   G++P  V
Sbjct: 243 NMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAV 302

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++  LI ++++ G++ +AL + +EMK+ G+  +   Y+++++GY + G    A  + ++M
Sbjct: 303 TYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDM 362

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
            E G   D VTYN +L   C+++ +T A  L   M  RG  P   T+ T+I G  K G++
Sbjct: 363 SEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDV 422

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
             A      M     +P+  TYN ++    ++G++++A  +  +M    + PN+ SY  L
Sbjct: 423 RMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTL 482

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + G+ S+G +  AF+    +     KP ++S  +++K  C++G    A     +M   GV
Sbjct: 483 MQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGV 542

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
             ++  +NTL++G+ +  +M +A+ ++ KM  +G  PD+ +Y   +   C+ G M  +  
Sbjct: 543 PMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATE 602

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            +  M ++ L P+  TYT LI+G  S ++ ++A   +DEM   G +PD
Sbjct: 603 TIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPD 650



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 226/461 (49%), Gaps = 9/461 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR---EGFLEEAFQLMNSMS 57
           +++A CK   ++ A+  + +ME++G+      YN L++ Y R   E      F  + +  
Sbjct: 234 IIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARI 293

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             GL P   TY  LIN   K G+  +A E   EM   G++ +  TY+ L+    +  + +
Sbjct: 294 DTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFA 353

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A  +F +MS  G+ PD V+++ L+  F ++ Q+ RA+     MK+ G  P    Y  II
Sbjct: 354 NAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITII 413

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G+ + G V  A K   EM   GC  +  TYN I++ L +   +  A  + +EM   GV 
Sbjct: 414 DGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQ 473

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+F ++TTL+ G    G +  A      + + + KP I++Y +L+   CK G M+ A  +
Sbjct: 474 PNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAV 533

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M    +  N   +  L++G+   G + EA+ +  +M  +G  P + S  + +   C+
Sbjct: 534 TEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCK 593

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +GD  KA E + +M  + + P+  +Y  LI+G+    + +KA     +M+  GL+PD   
Sbjct: 594 AGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPL 653

Query: 418 YNVILTGFCRQGRMHDSEL------ILWRMIEKGLNPDRST 452
           Y  I+T    +  +    +      +   M+++G+  D +T
Sbjct: 654 YYCIVTSLLSKAAIARETVRNGVLQVTSEMVDQGMCIDLAT 694



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 215/458 (46%), Gaps = 9/458 (1%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
           Y  LI+ Y + G    A      M   G+   V  YN+LI           A   ++EM 
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185

Query: 93  QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
             G+ P+ AT++ ++       N+  AE+ F          ++  +S++I  + + G ++
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNME 245

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGF------VLEALKMRDEMLEKGCVMDVV 206
           RA     +M+  GL     LY I+++GY R         V   LK R   ++ G     V
Sbjct: 246 RAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKAR---IDTGLSPTAV 302

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           TY  ++N   +   + +A +   EM  +G+  +  T++ L+ G+ + G+   A ++F+ M
Sbjct: 303 TYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDM 362

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
           ++  I+PD VTYN L+  FCK  +M +A +L   M +R  SP   +Y  +I+G+   G V
Sbjct: 363 SEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDV 422

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
             A++   EM   G +P   + N I+    + G   +A   + +M   GV P+  SY TL
Sbjct: 423 RMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTL 482

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           + GF     +  AF  + ++      P +I+Y  +L   C+ GRM ++  +   M   G+
Sbjct: 483 MQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGV 542

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +   + TL++G   + ++ EA+    +M Q GF PD
Sbjct: 543 PMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPD 580


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 256/523 (48%), Gaps = 40/523 (7%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQ-KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +   C + K D+ ++F   ++  + V    V ++ LI+ +     LE A  + ++    G
Sbjct: 218 IVGFCNEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVG 277

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCR----KENM 116
           L+P + T N L+  L +  R +  + V +E+   G SP+  TY  ++   C        M
Sbjct: 278 LEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGM 337

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +A  I  ++ R G  P +V++ST I    + G ++ ALM  R +       ++  +  +
Sbjct: 338 RQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDV 397

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I G+C+ G V EAL++ +EM   G + DV +Y+ ++N  C    + +  DL  EM    +
Sbjct: 398 IYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQI 457

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
            P   ++T+LIHG CK   +  A+++F  +   S K D   Y TLIDGFC  G+M+ A K
Sbjct: 458 KPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIK 517

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L  +MI  ++ P   S   LI GY  +G   +A  ++  M+  GI P  ++CN I+ G C
Sbjct: 518 LLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSC 577

Query: 357 RS-----------------------------------GDASKADEFLSKMVSEGVDPDSI 381
           R+                                   G   +A E L +M+   V P  +
Sbjct: 578 RAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVV 637

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y+TLI+GF ++ N  +A  L ++M   G+  ++ TY ++++ F    +MH++  I   M
Sbjct: 638 NYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEM 697

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            E+GL  D+ +YTTLI G  +   +K+A+   +EM + G  P+
Sbjct: 698 KERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPN 740



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 245/489 (50%), Gaps = 4/489 (0%)

Query: 1   MVNALCKDHKIDS----AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM 56
           M+N  C D   D+    A + L ++ + G  P  VTY+T I+  C+ G +E A  L+ ++
Sbjct: 323 MMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNL 382

Query: 57  SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
                     ++N +I G CK+G    A +VL+EM   G+ PD  +Y+ L+   C K ++
Sbjct: 383 HYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDV 442

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
            +  ++  EM    + P IVS+++LI    +   L  A+  F  + ++    D+ +Y  +
Sbjct: 443 MKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETL 502

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I+G+C  G +  A+K+ +EM+    V    +  +++ G  +  +  +A ++FN ML  G+
Sbjct: 503 IDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGI 562

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
           +PD      ++ G C+ G   +AL L +   +     +  +YN +I   CK G  E+A +
Sbjct: 563 WPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALE 622

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L   M+ R + P+ ++Y  LI+G+    +   A  L+  MV  GI   + +   ++  + 
Sbjct: 623 LLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFS 682

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
            S    +A     +M   G+  D ISY TLI GF     M KA+AL  +M  +G  P+VI
Sbjct: 683 HSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVI 742

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TY  I+ GFC+  R+  +  +  +M    + PD  TYT LI+ +       +A + +D M
Sbjct: 743 TYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVM 802

Query: 477 LQRGFVPDD 485
             +G +PDD
Sbjct: 803 KDKGVLPDD 811



 Score =  237 bits (605), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 219/421 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK  ++  A   L EM+  G+ PD  +Y+ LINA+C +G + +   LM  M    
Sbjct: 397 VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP + +Y SLI+GLCKK     A ++   +       D+  Y TL+   C + +M  A 
Sbjct: 457 IKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAI 516

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM    + P   S  +LI  + + G  D+AL  F  M   G+ PD +    I++G 
Sbjct: 517 KLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGS 576

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G+  EAL + ++  E G  ++  +YN I+  LC+      A +L   ML+R V P  
Sbjct: 577 CRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSV 636

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             ++TLI G  K  N  +A+NLF  M +  I  +I TY  L+  F    +M +A  ++ +
Sbjct: 637 VNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKE 696

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R +  + ISY  LI G+C+   + +A+ L+ EM  +G  P +++   II G+C+S  
Sbjct: 697 MKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNR 756

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A     KM  + V PD ++Y  LI+ + +    D+A  L   M+++G++PD IT+NV
Sbjct: 757 IDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNV 816

Query: 421 I 421
           +
Sbjct: 817 L 817



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 232/455 (50%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ LCK   +++A M +  +       ++ ++N +I  +C+ G + EA Q++  M   G+
Sbjct: 363 IHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGI 422

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P V++Y+ LIN  C KG   +  ++++EM    + P   +Y +L+   C+K  +  A +
Sbjct: 423 LPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVD 482

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           IF  +       D   + TLI  F   G +D A+    EM    LVP       +I GY 
Sbjct: 483 IFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYY 542

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G   +AL++ + ML  G   D +  N IL+G CRA    EA  L  +  E G   + +
Sbjct: 543 KLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPH 602

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           ++  +I+  CK+G   +AL L   M ++++ P +V Y+TLI GF K    ++A  L+  M
Sbjct: 603 SYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRM 662

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           +   I+ N  +Y IL++ +     + EA+ ++ EM  +G+    +S  T+I G+C + + 
Sbjct: 663 VKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREM 722

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            KA     +M  EG  P+ I+Y  +I+GF +   +D A  +  KM    ++PDV+TY V+
Sbjct: 723 KKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVL 782

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           +  + + G    +  +   M +KG+ PD  T+  L
Sbjct: 783 IDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 263/486 (54%), Gaps = 2/486 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN  CK +++  A      ME++G+ PD V ++ ++  +C+   +E+A +    M    
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P     +++I G  K    + A E+ ++  +  ++      N + +  C++  +  A 
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAAT 469

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M ++G+ P++V ++ ++    R   +D A   F EM   GL P+N  Y+I+I+G+
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP-D 239
            +N     A  + ++M       + V YNTI+NGLC+    ++A ++   +++   +   
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             ++ ++I G  K G+ + A+  +  M++    P++VT+ +LI+GFCK   M+ A ++  
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M S ++  +  +YG LI+G+C    +  A+ L+ E+   G+ P +   N++I G+   G
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               A +   KMV++G+  D  +Y T+I+G +++ N++ A  L S++ + G+VPD I + 
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHM 769

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           V++ G  ++G+   +  +L  M +K + P+   Y+T+I GH  + NL EAFR HDEML++
Sbjct: 770 VLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829

Query: 480 GFVPDD 485
           G V DD
Sbjct: 830 GIVHDD 835



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 248/555 (44%), Gaps = 83/555 (14%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MVN L     +DS+K F  E+  +        +N L+NAY R   ++ A      M  + 
Sbjct: 152 MVNNL-----VDSSKRFGFELTPRA-------FNYLLNAYIRNKRMDYAVDCFGLMVDRK 199

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V   N++++ L +    D AKE+ ++M+ +G++ D  T   L+  S R+    EA 
Sbjct: 200 VVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAV 259

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVP-DNVLYTIIING 179
           +IF  +  RG  PD + FS  +    +   L  AL   REM+    VP     YT +I  
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           + + G + EA+++ DEM+  G  M V+   +++NG C+   L +A DLFN M E G+ PD
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG--------------- 284
              F+ ++   CK+  M KA+  +  M    I P  V  +T+I G               
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439

Query: 285 -------------------FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
                              FCK G+++ A      M  + I PN + Y  ++  +C M +
Sbjct: 440 DSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKN 499

Query: 326 VTEAFRLWYEMVGKGIKP-----------------------------------TLVSCNT 350
           +  A  ++ EM+ KG++P                                     V  NT
Sbjct: 500 MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNT 559

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDS-ISYNTLINGFVREENMDKAFALVSKMENQ 409
           II G C+ G  SKA E L  ++ E     S  SYN++I+GFV+  + D A     +M   
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G  P+V+T+  ++ GFC+  RM  +  +   M    L  D   Y  LI+G   +N++K A
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679

Query: 470 FRFHDEMLQRGFVPD 484
           +    E+ + G +P+
Sbjct: 680 YTLFSELPELGLMPN 694


>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
          Length = 795

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 248/472 (52%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  K + A   L  ME  G  P  VTYN+LI+AY ++G LEEA +L   M  +G
Sbjct: 296 LLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRG 355

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP V TY +LI+GL + G+ D A     EM++ G SP+  TYN L+     +   +E  
Sbjct: 356 MKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMM 415

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F ++   G  PD+V+++TL+ +F +NG        F+EMK AG +P+   Y  +I+ Y
Sbjct: 416 AVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 475

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A+++   M+E G   D+ TYN +L+ L R     +A+ LF EM++R   PD 
Sbjct: 476 SRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDE 535

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++++L+H +     ++K   L + +  + I+       TL+    KV  + +  K + +
Sbjct: 536 LSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQE 595

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R+ S +      +++ Y     V +   +   M+   I  +  + N+++  Y R GD
Sbjct: 596 LRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGD 655

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K +  L+++ S G+ PD  SYNT+I  + R+  M +A  L S+M+  G+ PD++TYN+
Sbjct: 656 CEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNI 715

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            +  +       ++  ++  ++ +G  P+  T+ +++ G+     + EA  F
Sbjct: 716 FIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSF 767



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 249/500 (49%), Gaps = 35/500 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M++ G+  D  TYNTLI+   R G   EA Q+ + M   G +P   T+NSL++   K  +
Sbjct: 246 MKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARK 305

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A  VL  M   G +P   TYN+L+    +   + EA E+  EM  RG+ PD+V+++T
Sbjct: 306 HEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 365

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    R G++D AL  + EM   G  P+   Y  +I  +   G   E + + D++   G
Sbjct: 366 LISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAG 425

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            V DVVT+NT+L+   +  + +E   +F EM + G  P+  T+ +LI  + + G  ++A+
Sbjct: 426 YVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 485

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            ++  M +  I PDI TYN ++    + G  E+A KL+A+M+ R   P+ +SY  L++ Y
Sbjct: 486 EIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAY 545

Query: 321 CS-----------------------------------MGHVTEAFRLWYEMVGKGIKPTL 345
            +                                   + ++ E  + + E+  +     +
Sbjct: 546 ANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDI 605

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
              N ++  Y ++    K +E LS M+   ++  + +YN+L++ + R  + +K  +++++
Sbjct: 606 NVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTE 665

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +++ G+ PD  +YN ++  + R+G+M ++  +   M   G+ PD  TY   I  +V+   
Sbjct: 666 IKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIM 725

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
            +EA      ++ +G  P++
Sbjct: 726 FEEAIDLVRYLVTQGCRPNE 745



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 194/373 (52%), Gaps = 3/373 (0%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG-RCDRAKE 86
           PD   Y  L++A+ R G   +A  +   M   G++P + TYN + +   K          
Sbjct: 182 PDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVA 241

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMS-EAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++D M + G+  D  TYNTL +  CR+  +  EA ++F EM   G  PD V+F++L+ ++
Sbjct: 242 LVDSMKEDGIERDRYTYNTL-ISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVY 300

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +  + + A+   + M++AG  P  V Y  +I+ Y ++G + EAL+++ EM  +G   DV
Sbjct: 301 GKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 360

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VTY T+++GL R   +  A   ++EM+  G  P+  T+  LI  H   G   + + +FD 
Sbjct: 361 VTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDD 420

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +      PD+VT+NTL+  F + G   + + ++ +M      P   +Y  LI+ Y   G 
Sbjct: 421 LRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 480

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +A  ++  M+  GI P + + N ++    R G   +A++  ++MV     PD +SY++
Sbjct: 481 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSS 540

Query: 386 LINGFVREENMDK 398
           L++ +   + +DK
Sbjct: 541 LLHAYANAKKLDK 553



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 177/355 (49%), Gaps = 1/355 (0%)

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL-EAL 190
           APD  +++ L+  FSR G+   A+  F+ M   G+ P  V Y ++ + Y +      E +
Sbjct: 181 APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVV 240

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
            + D M E G   D  TYNT+++   R  +  EA  +F+EM   G  PD  TF +L+  +
Sbjct: 241 ALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVY 300

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
            K     +A+ +   M      P +VTYN+LI  + K G +E+A +L  +M  R + P+ 
Sbjct: 301 GKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 360

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LI+G   +G +  A   + EMV  G  P L + N +IK +   G  ++       
Sbjct: 361 VTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDD 420

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           + S G  PD +++NTL++ F +     +   +  +M+  G +P+  TY  +++ + R G 
Sbjct: 421 LRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 480

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
              +  I  RMIE G+ PD STY  +++        ++A +   EM+ R   PD+
Sbjct: 481 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDE 535



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 190/375 (50%), Gaps = 8/375 (2%)

Query: 3   NALCKDH----KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           NAL K H    K         ++   G  PD VT+NTL++ + + G   E   +   M  
Sbjct: 399 NALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKK 458

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            G  P   TY SLI+   + G  D+A E+   M++ G+ PD +TYN +L    R     +
Sbjct: 459 AGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQ 518

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT--II 176
           AE++F EM  R   PD +S+S+L+  ++   +LD+      ++ +  +   N L    ++
Sbjct: 519 AEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVL 578

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           +N    N  + E  K   E+  + C +D+   N +++   + KM+ + +++ + M+E  +
Sbjct: 579 VNNKVNN--LPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSI 636

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
                T+ +L+H + + G+  K  ++   +    ++PD  +YNT+I  + + G+M++A++
Sbjct: 637 NHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASR 696

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           L+++M    + P+ ++Y I I  Y +     EA  L   +V +G +P   + N+I++GY 
Sbjct: 697 LFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYS 756

Query: 357 RSGDASKADEFLSKM 371
           R G   +A  FLS +
Sbjct: 757 RHGRMVEAKSFLSNL 771



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 167/348 (47%), Gaps = 5/348 (1%)

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
             T I +F+R G L  A         A   PD   YT +++ + R G   +A+ +   M+
Sbjct: 156 LPTAIRVFARAGCLAEASAIL----EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMV 211

Query: 198 EKGCVMDVVTYNTILNGLCRAKM-LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           + G    +VTYN + +   +  +   E   L + M E G+  D YT+ TLI    + G  
Sbjct: 212 DGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLH 271

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            +A  +FD M     +PD VT+N+L+D + K  + E+A  +   M +   +P+ ++Y  L
Sbjct: 272 REAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSL 331

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+ Y   G + EA  L  EM  +G+KP +V+  T+I G  R G    A    S+MV  G 
Sbjct: 332 ISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGC 391

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+  +YN LI          +  A+   + + G VPDV+T+N +L+ F + G   +   
Sbjct: 392 SPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSG 451

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   M + G  P+R TY +LI+ +       +A   +  M++ G  PD
Sbjct: 452 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPD 499



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 120/266 (45%), Gaps = 35/266 (13%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYC------------------- 41
           +++AL +  + + A+    EM  +   PD ++Y++L++AY                    
Sbjct: 506 VLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAER 565

Query: 42  --REGFLEEAFQLMNS--------------MSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
             R  +L +   L+N+              +  +     +   N++++   K     + +
Sbjct: 566 IERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVE 625

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           EVL  M++  ++   ATYN+L+    R  +  + E I  E+   G+ PD  S++T+I  +
Sbjct: 626 EVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAY 685

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R GQ+  A   F EMK +G+ PD V Y I I  Y  N    EA+ +   ++ +GC  + 
Sbjct: 686 GRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNE 745

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEM 231
            T+N+IL G  R   + EA    + +
Sbjct: 746 RTFNSILQGYSRHGRMVEAKSFLSNL 771


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 135/426 (31%), Positives = 238/426 (55%), Gaps = 4/426 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS---MS 57
           ++ ALCK+ K+  A   +  M +  ++P+ V++N +I+   + G ++ A +L  +   +S
Sbjct: 220 IIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMDLALKLTRNTEVIS 279

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           G  + P + TYN +ING CK  R + AK VL EM+++G+  +  TY  L+    RK ++ 
Sbjct: 280 GGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLD 339

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A  +  EM    + PD V +++LI      G+L+ A     +M +  ++PD   Y+I+ 
Sbjct: 340 VAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILT 399

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
            G C +G + +AL++   ++E+  V D  T+N ++N + +++ +  A  L + M+ RG+ 
Sbjct: 400 KGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIK 459

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+ TL+ GHCK+G +  A+ ++D   +   K ++V YN+++DG CK G ++ A +L
Sbjct: 460 PDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAA-RL 518

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             D + +    + ++Y  L++G+C  G V +AF L+ EM+  G    +VS N +I   C+
Sbjct: 519 LVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCK 578

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A E +  M S+G+ PD I+Y TLI  FV+    D    L   M  +G VPD  T
Sbjct: 579 MGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQT 638

Query: 418 YNVILT 423
           Y  +++
Sbjct: 639 YQSLVS 644



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 231/432 (53%), Gaps = 4/432 (0%)

Query: 56  MSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
           M   G    V T+N +I  LCK+ +   A  V+  ML++ + P+  ++N ++ ++ +   
Sbjct: 205 MVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGE 264

Query: 116 MSEAEEIFCE---MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
           M  A ++      +S   V+P+IV+++ +I  F +  +L+ A     EM   G+  +   
Sbjct: 265 MDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERT 324

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           Y  +I+GY R G +  A ++ DEM+E   + D V YN+++  L     L EA  L ++M+
Sbjct: 325 YAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMI 384

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
            R + PD +T++ L  G C  G++NKAL +   + ++++  D  T+N LI+   +   + 
Sbjct: 385 NRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIA 444

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
            A +L + MI R I P+ ++YG L+ G+C  G +  A +++ + V    K  LV  N+I+
Sbjct: 445 GAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSIL 504

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
            G C+ G    A   + K+   G   DS++YNTL++GF     ++KAFAL  +M N G +
Sbjct: 505 DGLCKQGSIDAARLLVDKLQQNGF-LDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSL 563

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            ++++YN+++   C+ G +  +  ++  M  +G+ PD  TYTTLI   V           
Sbjct: 564 VNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIEL 623

Query: 473 HDEMLQRGFVPD 484
           HD M+ +G VPD
Sbjct: 624 HDYMVLKGAVPD 635



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 159/329 (48%), Gaps = 38/329 (11%)

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           M  EM+  G   +V T+N I+  LC+   L EA  +   ML+  ++P+  +F  +I    
Sbjct: 201 MYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKAS 260

Query: 252 KDGNMNKALNLF---DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           K G M+ AL L    ++++  S+ P+IVTYN +I+GFCK+  +E A  + A+MI   I  
Sbjct: 261 KMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDS 320

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII---------------- 352
           N  +Y  LI+GY   G +  AFRL  EMV   + P  V  N++I                
Sbjct: 321 NERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLL 380

Query: 353 -------------------KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
                              KG C SG  +KA      +V   +  D+ ++N LIN   + 
Sbjct: 381 SDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQS 440

Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
            N+  A  L+S M  +G+ PD++TY  ++ G C++G++  +  I  + ++     +   Y
Sbjct: 441 RNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVY 500

Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
            ++++G   Q ++  A    D++ Q GF+
Sbjct: 501 NSILDGLCKQGSIDAARLLVDKLQQNGFL 529



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 142/268 (52%), Gaps = 6/268 (2%)

Query: 223 EADDLFN---EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
           E D  +N   EM+  G   +  TF  +I+  CK+  + +A+++  +M +  I P++V++N
Sbjct: 194 ETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFN 253

Query: 280 TLIDGFCKVGEMEKANKLW--ADMISR-KISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            +ID   K+GEM+ A KL    ++IS   +SPN ++Y  +ING+C +  +  A  +  EM
Sbjct: 254 MIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEM 313

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
           +  GI     +   +I GY R G    A     +MV   + PD++ YN+LI     E  +
Sbjct: 314 IKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGEL 373

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
           ++A  L+S M N+ ++PD  TY+++  G C  G ++ +  + + ++E+ L  D  T+  L
Sbjct: 374 EEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNIL 433

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           IN      N+  A +    M+ RG  PD
Sbjct: 434 INYMFQSRNIAGAKQLLSSMIVRGIKPD 461



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 36/287 (12%)

Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
            EA D F+  LE        +  TL+H      N N AL++ + +  K+ K  +     L
Sbjct: 82  VEARDNFSHSLE--------SCCTLVHVLVNSRNFNDALSIMESLMLKNGKSPLEVLGGL 133

Query: 282 IDGFCKVGEMEKANKLWADMISRKISP--------------NYISYGILINGY------- 320
           ++ +    E+  +N    D + R  +                   + + I+ +       
Sbjct: 134 MNSY----EICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLL 189

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G   + + ++ EMV  G    + + N II   C+     +A   +  M+   + P+ 
Sbjct: 190 LKLGETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNV 249

Query: 381 ISYNTLINGFVREENMDKAFALVSKME---NQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           +S+N +I+   +   MD A  L    E      + P+++TYN I+ GFC+  R+  ++ +
Sbjct: 250 VSFNMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNV 309

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L  MI+ G++ +  TY  LI+G+  + +L  AFR  DEM++   +PD
Sbjct: 310 LAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPD 356



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 38/234 (16%)

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           GE +K   ++ +M++   S N  ++ ++I   C    + EA  + Y M+   I P +VS 
Sbjct: 193 GETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSF 252

Query: 349 NTIIKGYCRSGDASKADEFL--SKMVSEG-VDPDSISYNTLINGF--------------- 390
           N II    + G+   A +    ++++S G V P+ ++YN +INGF               
Sbjct: 253 NMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAE 312

Query: 391 --------------------VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
                                R+ ++D AF L  +M    L+PD + YN ++     +G 
Sbjct: 313 MIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGE 372

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + ++  +L  MI + + PD  TY+ L  G     +L +A R H  +++R  V D
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKD 426


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  247 bits (631), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 233/413 (56%), Gaps = 5/413 (1%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           L+ A  +E    +   +   M  + ++P VFT+N +IN LCK G+ ++A++V+++M   G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 96  LSPDTATYNTLLVESCR---KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
            SP+  +YNTL+   C+      M +A+ +  EM    V+P++ +F+ LI  F ++  L 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
            ++  F+EM    + P+ + Y  +ING C  G + EA+ MRD+M+  G   +++TYN ++
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           NG C+  ML EA D+F  +  +G  P    +  LI  +CK G ++    L + M ++ I 
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           PD+ TYN LI G C+ G +E A KL+ D ++ K  P+ +++ IL+ GYC  G   +A  L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTSKGLPDLVTFHILMEGYCRKGESRKAAML 492

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE-GVDPDSISYNTLINGFV 391
             EM   G+KP  ++ N ++KGYC+ G+   A    ++M  E  +  +  SYN L+ G+ 
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           ++  ++ A  L+++M  +GLVP+ ITY ++      QG + D E  L+ +  K
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTK 605



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 266/483 (55%), Gaps = 27/483 (5%)

Query: 8   DHKIDS--AKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           DH++ S    + +C+     V  +++  + L+ AY      E  F+        G K   
Sbjct: 133 DHQVHSIFHAISMCD----NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSA 188

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            +   L+  L K+ R    + V  EM++  + P+  T+N ++   C+   M++A ++  +
Sbjct: 189 LSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED 248

Query: 126 MSRRGVAPDIVSFSTLIGIFSR---NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
           M   G +P++VS++TLI  + +   NG++ +A    +EM    + P+   + I+I+G+ +
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           +  +  ++K+  EML++    +V++YN+++NGLC    ++EA  + ++M+  GV P+  T
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +  LI+G CK+  + +AL++F  +  +   P    YN LID +CK+G+++    L  +M 
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
              I P+  +Y  LI G C  G++  A +L+ ++  KG+ P LV+ + +++GYCR G++ 
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESR 487

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ-GLVPDVITYNVI 421
           KA   L +M   G+ P  ++YN ++ G+ +E N+  A  + ++ME +  L  +V +YNV+
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L G+ ++G++ D+ ++L  M+EKGL P+R TY  +                 +EM+ +GF
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV----------------KEEMVDQGF 591

Query: 482 VPD 484
           VPD
Sbjct: 592 VPD 594



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 231/416 (55%), Gaps = 21/416 (5%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           AL K+++    +    EM ++ + P+  T+N +INA C+ G + +A  +M  M   G  P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256

Query: 64  GVFTYNSLINGLCK---KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            V +YN+LI+G CK    G+  +A  VL EM++  +SP+  T+N L+    + +N+  + 
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F EM  + V P+++S+++LI      G++  A+    +M SAG+ P+ + Y  +ING+
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+N  + EAL M   +  +G V     YN +++  C+   + +   L  EM   G+ PD 
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  LI G C++GN+  A  LFD +T K + PD+VT++ L++G+C+ GE  KA  L  +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG-KGIKPTLVSCNTIIKGYCRSG 359
           M    + P +++Y I++ GYC  G++  A  +  +M   + ++  + S N +++GY + G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
               A+  L++M+ +G+ P+ I+Y       V+EE +D           QG VPD+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYE-----IVKEEMVD-----------QGFVPDI 595



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 196/351 (55%), Gaps = 5/351 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR---EGFLEEAFQLMNSMS 57
           ++NALCK  K++ A+  + +M+  G  P+ V+YNTLI+ YC+    G + +A  ++  M 
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
              + P + T+N LI+G  K      + +V  EML   + P+  +YN+L+   C    +S
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           EA  +  +M   GV P++++++ LI  F +N  L  AL  F  +K  G VP   +Y ++I
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           + YC+ G + +   +++EM  +G V DV TYN ++ GLCR   +  A  LF+++  +G+ 
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL- 467

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  TF  L+ G+C+ G   KA  L   M++  +KP  +TYN ++ G+CK G ++ A  +
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527

Query: 298 WADM-ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
              M   R++  N  SY +L+ GY   G + +A  L  EM+ KG+ P  ++
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578


>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Brachypodium distachyon]
          Length = 791

 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 243/472 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  + D A   L EMEQ G  P  VTYN+LI++Y ++G LEEA QL   M  KG
Sbjct: 288 LLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKG 347

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY +L++GL + G+ D A    +EML+ G  P+  TYN L+     +    E  
Sbjct: 348 IEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMM 407

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E+   G  PD+V+++TL+ +F +NG        F+EMK +G VP+   Y  +I+ Y
Sbjct: 408 IVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSY 467

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A+++   M+E G   D+ TYN +L+ L R     +A+ LF EM      PD 
Sbjct: 468 SRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDE 527

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++++L+H +     ++K  +L + +  + I+       TL+    KV  +    K + +
Sbjct: 528 LSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLE 587

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  R+ S +      +I+ Y   G V +   +   M    I  +  + N+++  Y R GD
Sbjct: 588 LRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGD 647

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K +  L+++ S    PD  SYNT+I  + R+  M +A  L S+M+  GLVPD++TYN+
Sbjct: 648 CEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNI 707

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            +  +       ++  ++  M+  G  P+  TY T++  + S   + +   F
Sbjct: 708 FVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSF 759



 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 245/500 (49%), Gaps = 35/500 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M + G+  D  TYNTLI+   R    +EA ++ + M   G +P   T NSL++   K  R
Sbjct: 238 MRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARR 297

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A  VL EM Q G  P   TYN+L+    +   + EA ++  EM  +G+ PD+++++T
Sbjct: 298 YDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTT 357

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+    R G++D A+  + EM   G  P+   Y  +I  +   G   E + + DE+   G
Sbjct: 358 LVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAG 417

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            V DVVT+NT+L    +  + TE   +F EM + G  P+  T+ +LI  + + G  ++A+
Sbjct: 418 FVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAM 477

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            ++  M +  I PDI TYN ++    + G  E+A KL+A+M +    P+ +SY  L++ Y
Sbjct: 478 EIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAY 537

Query: 321 CSMGHVTEAFRLWYEMVGK------GIKPTLVSCNT------------------------ 350
            +   + +   L  ++  +      G+  TLV  N+                        
Sbjct: 538 ANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDI 597

Query: 351 -----IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
                +I  Y ++G   K +E LS M    ++  + +YN+L++ + R  + +K   ++++
Sbjct: 598 NVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTE 657

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +++    PD  +YN ++  + R+G+M ++  +   M   GL PD  TY   +  +V+ + 
Sbjct: 658 IKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSM 717

Query: 466 LKEAFRFHDEMLQRGFVPDD 485
            +EA      M+  G  P++
Sbjct: 718 FEEAIDLVRYMVTHGCKPNE 737



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 240/531 (45%), Gaps = 77/531 (14%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD   Y  LI+A  R     +A  +   M   G+ P + TYN +++   K       KEV
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVP--WKEV 231

Query: 88  L---DEMLQMGLSPDTATYNTLLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           L   D M + G+  D  TYNTL +  CR+  +  EA ++F EM   G  PD V+ ++L+ 
Sbjct: 232 LALVDSMRKDGIPLDRYTYNTL-ISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLD 290

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
           ++ +  + D A+   +EM+  G  P  V Y  +I+ Y ++G + EA ++++EM  KG   
Sbjct: 291 VYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEP 350

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           DV+TY T+++GL RA  +  A   +NEML  G  P+  T+  LI  H   G   + + +F
Sbjct: 351 DVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVF 410

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D +      PD+VT+NTL+  F + G   + + ++ +M      P   +Y  LI+ Y   
Sbjct: 411 DEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRC 470

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G   +A  ++  M+  GI P + + N ++    R G   +A++  ++M +    PD +SY
Sbjct: 471 GLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSY 530

Query: 384 NTLINGFVREENMDKAFAL-----VSKMENQ-GLVP------------------------ 413
           ++L++ +   + +DK  +L       ++E+  GLV                         
Sbjct: 531 SSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRR 590

Query: 414 -----DVITYNVILTGFCRQGRMHDSELILWRMIEKGLN--------------------- 447
                D+   N +++ + + G +   E IL  M E  +N                     
Sbjct: 591 RRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEK 650

Query: 448 --------------PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
                         PDR +Y T+I  +  +  +KEA R   EM   G VPD
Sbjct: 651 CENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPD 701



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 210/457 (45%), Gaps = 45/457 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++  KD  ++ A     EME KG+ PD +TY TL++   R G ++ A    N M   G
Sbjct: 323 LISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNG 382

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + TYN+LI     +G+      V DE+   G  PD  T+NTLL    +    +E  
Sbjct: 383 CKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVS 442

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM + G  P+  ++ +LI  +SR G  D+A+  ++ M  AG+ PD   Y  +++  
Sbjct: 443 GVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSAL 502

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE----ADDLFNEMLE--- 233
            R G   +A K+  EM       D ++Y+++L+    AK L +    ++D++ E +E   
Sbjct: 503 ARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHN 562

Query: 234 ----------------------------RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                       R    D      +I  + K+G + K   +  +
Sbjct: 563 GLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSL 622

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M + SI     TYN+L+  + ++G+ EK   +  ++ S +  P+  SY  +I  Y   G 
Sbjct: 623 MKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQ 682

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA RL+ EM   G+ P +V+ N  +K Y  +    +A + +  MV+ G  P+  +YNT
Sbjct: 683 MKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNT 742

Query: 386 LINGFVRE----------ENMDKAFALVSKMENQGLV 412
           ++  +              N+ +    +SK E Q L+
Sbjct: 743 ILQEYCSHGRIADGKSFISNLPELHPGISKREQQRLL 779



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 176/354 (49%), Gaps = 1/354 (0%)

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL-EALK 191
           PD  +++ LI   SR  +   A+  FR M + G+ P  V Y ++++ Y +      E L 
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + D M + G  +D  TYNT+++   R  +  EA  +F+EM   G  PD  T  +L+  + 
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K    ++A+ +   M Q    P +VTYN+LI  + K G +E+A +L  +M  + I P+ I
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  L++G    G +  A   + EM+  G KP L + N +IK +   G   +      ++
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEI 413

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            S G  PD +++NTL+  F +     +   +  +M+  G VP+  TY  +++ + R G  
Sbjct: 414 RSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLF 473

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             +  I  RMIE G++PD STY  +++        ++A +   EM      PD+
Sbjct: 474 DQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDE 527



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
           DPD+ +Y  LI+   R      A A+  +M   G+ P ++TYNV+L  + +        L
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVL 232

Query: 437 ILWRMIEK-GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            L   + K G+  DR TY TLI+    +   KEA +  DEM   GF PD
Sbjct: 233 ALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPD 281


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 213/390 (54%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P  V ++ L ++  R G  E    L   +   G++  + + + LIN  C   R D    V
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           L ++L++GL P   T+ TLL   C +  M +   ++ +M  RG+ P++ +++ +I   S+
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
           +G+ + AL + ++M+  G VP+ V Y+ +I+GYC  G + EA  + D M+ KGC  +V T
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y +++NG C+ + + EA  L +E L +G+ PD  TFTT+I G C+ G    A  LF  + 
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
                P+I+TY  L+DG CK G +E+A  L+ +M    + PN + Y ILI+  C  G + 
Sbjct: 300 AHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIK 359

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +   L+  ++ +G+KP + +   ++   C+ G   +A +   KM  +G  PD  +YN +I
Sbjct: 360 DGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVII 419

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVIT 417
            GF++ ++   A  LV +M N+G   D  T
Sbjct: 420 QGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 207/371 (55%), Gaps = 1/371 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           E+E  G+  D  + + LIN +C    ++    +++ +   GL+P + T+ +L+NGLC +G
Sbjct: 87  EIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEG 146

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           + D+   + D+ML  GL P+  TYN ++    +    +EA     +M + G  P++V++S
Sbjct: 147 KMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYS 206

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TLI  +   GQ+D A   F  M S G  P+   YT ++NGYC+   + EA+++ DE L K
Sbjct: 207 TLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRK 266

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G V D+VT+ TI++GLCRA     A  LF  +   G  P+  T+  L+ G CK GN+ +A
Sbjct: 267 GLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEA 326

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
             LF  M + ++KP++V Y  LID  CK G+++   +L++ +I   + PN  +Y  L+  
Sbjct: 327 FALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGA 386

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C  G + EA +L+ +M   G  P   + N II+G+ +  D S A + + +MV+ G   D
Sbjct: 387 LCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446

Query: 380 SISYNTLINGF 390
           + +   L+N F
Sbjct: 447 AAT-RALLNDF 456



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 211/394 (53%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P +  ++ L + + + G  +    +  E+  +G+  D  + + L+   C    +     +
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
             ++ + G+ P IV+F+TL+      G++D+ +M + +M   GL P+   Y +IIN   +
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
           +G   EAL    +M + GCV +VV Y+T+++G C    + EA  +F+ M+ +G  P+ YT
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +T+L++G+CK   + +A+ L D   +K + PDIVT+ T+I G C+ G    A +L+  + 
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           +   +PN ++YG+L++G C  G++ EAF L+ EM    +KP LV    +I   C+ G   
Sbjct: 300 AHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIK 359

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
              E  S+++ EG+ P+  +Y  L+    +E  + +A  L  KME  G  PD   YNVI+
Sbjct: 360 DGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVII 419

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            GF +      +  ++  M+ +G + D +T   L
Sbjct: 420 QGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 199/359 (55%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  R   P IV FS L     R G  +  +   +E++  G+  D    +I+IN +C    
Sbjct: 53  MLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHR 112

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V   L +  ++L+ G    +VT+ T+LNGLC    + +   L+++ML RG+ P+ YT+  
Sbjct: 113 VDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNV 172

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           +I+   K G  N+AL     M +    P++V Y+TLIDG+C  G+M++A  ++  M+S+ 
Sbjct: 173 IINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG 232

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
            +PN  +Y  L+NGYC +  + EA +L  E + KG+ P +V+  TII G CR+G    A 
Sbjct: 233 CTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQ 292

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +    + + G  P+ ++Y  L++G  +  N+++AFAL  +M+   + P+++ Y +++   
Sbjct: 293 QLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSL 352

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           C+ G++ D + +  R+I++GL P+  TYT L+     +  + EA +   +M + G  PD
Sbjct: 353 CKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPD 411



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 184/340 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C  H++D     L ++ + G+ P  VT+ TL+N  C EG +++   L + M  +G
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG 162

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P V+TYN +IN L K G+ + A   L +M ++G  P+   Y+TL+   C +  M EA 
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M  +G  P++ ++++L+  + +  +++ A+    E    GLVPD V +T II+G 
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G  L A ++   +   G   +++TY  +L+GLC+   L EA  LF EM    V P+ 
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNL 342

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T LI   CK G +     LF  +  + +KP++ TY  L+   CK G + +A+KL+  
Sbjct: 343 VIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRK 402

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           M     +P+  +Y ++I G+      + A +L  EMV +G
Sbjct: 403 MEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRG 442



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 191/362 (52%)

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
           E+   G+  DI S S LI  F    ++D  L    ++   GL P  V +T ++NG C  G
Sbjct: 87  EIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEG 146

Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
            + + + + D+ML +G   +V TYN I+N L ++    EA     +M + G  P+   ++
Sbjct: 147 KMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYS 206

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TLI G+C  G M++A ++FD+M  K   P++ TY +L++G+CK+  +E+A +L  + + +
Sbjct: 207 TLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRK 266

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
            + P+ +++  +I+G C  G    A +L+  +   G  P +++   ++ G C+ G+  +A
Sbjct: 267 GLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEA 326

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
                +M    V P+ + Y  LI+   +   +     L S++ ++GL P+V TY  ++  
Sbjct: 327 FALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGA 386

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C++G + ++  +  +M E G  PD+  Y  +I G +   +   A +  +EM+ RGF  D
Sbjct: 387 LCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446

Query: 485 DA 486
            A
Sbjct: 447 AA 448



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 174/316 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC + K+D   M   +M  +G+ P+  TYN +IN+  + G   EA   +  M   G
Sbjct: 138 LLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVG 197

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V  Y++LI+G C +G+ D A+ V D M+  G +P+  TY +L+   C+ E + EA 
Sbjct: 198 CVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAV 257

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E  R+G+ PDIV+F+T+I    R G+   A   FR + + G  P+ + Y ++++G 
Sbjct: 258 QLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGL 317

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G + EA  +  EM       ++V Y  +++ LC+   + +  +LF+ +++ G+ P+ 
Sbjct: 318 CKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNV 377

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+T L+   CK+G + +A  LF  M +    PD   YN +I GF +  +   A +L  +
Sbjct: 378 YTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEE 437

Query: 301 MISRKISPNYISYGIL 316
           M++R  S +  +  +L
Sbjct: 438 MVNRGFSADAATRALL 453



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 157/283 (55%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N+L K  K + A  FL +ME+ G  P+ V Y+TLI+ YC  G ++EA  + + M  KG
Sbjct: 173 IINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG 232

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V+TY SL+NG CK  R + A ++LDE L+ GL PD  T+ T++   CR      A+
Sbjct: 233 CTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQ 292

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F  +   G  P+I+++  L+    ++G L+ A   F+EM+ + + P+ V+YTI+I+  
Sbjct: 293 QLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSL 352

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +  ++   ++++G   +V TY  ++  LC+  ++ EA  LF +M E G  PD 
Sbjct: 353 CKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDK 412

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
             +  +I G  +  + + A  L + M  +    D  T   L D
Sbjct: 413 CAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 244/456 (53%), Gaps = 23/456 (5%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
            + P+ +T+N +I A C+ G +++A Q+   M+ +  +P V+TY +L++GLCK  R D A
Sbjct: 194 SISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEA 253

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             +LDEM   G  P   T+N L+   C+K ++S A ++   M  +G  P+ V+++TLI  
Sbjct: 254 VSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHG 313

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
               G+L++A+     M S+  VP+ V Y  IING  + G  L+   +   M E+G  ++
Sbjct: 314 LCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVN 373

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
              Y+T+++GL +     EA  LF EM  +G   +   ++ +I G C+DG  + A+ +  
Sbjct: 374 EYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLS 433

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            MT K   P+  T ++L+ GF + G   +A ++W DM     + N + Y +LI+G C  G
Sbjct: 434 EMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDG 493

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSIS 382
            V EA  +W +M+GKG KP +V+ +++I G   +G    A +  ++M+ +G D  PD ++
Sbjct: 494 KVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVT 553

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL-------------------- 422
           YN L+N   ++ ++ +A  L++ M ++G  PD++T  + L                    
Sbjct: 554 YNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDEL 613

Query: 423 -TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
                ++ R+  +  I+  M++K L P  ST+  ++
Sbjct: 614 VVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVV 649



 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 224/431 (51%), Gaps = 5/431 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSM---SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           ++N+++N   +EG    A +  N +    G  + P V T+N +I  +CK G  D A +V 
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            +M      PD  TY TL+   C+ + + EA  +  EM   G  P  V+F+ LI    + 
Sbjct: 223 RDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 282

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L RA      M   G +P+ V Y  +I+G C  G + +A+ + D M+   CV +VVTY
Sbjct: 283 GDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTY 342

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
            TI+NGL +     +   +   M ERG   + Y ++TLI G  K+G   +A++LF  MT 
Sbjct: 343 GTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTV 402

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K  + + + Y+ +IDG C+ G+ + A ++ ++M ++  +PN  +   L+ G+   G+   
Sbjct: 403 KGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHR 462

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +W +M         V  + +I G C+ G   +A    ++M+ +G  PD ++Y+++IN
Sbjct: 463 AVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMIN 522

Query: 389 GFVREENMDKAFALVSKMENQGL--VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           G      ++ A  L ++M  QG    PDV+TYN++L   C+Q  +  +  +L  M+++G 
Sbjct: 523 GLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGC 582

Query: 447 NPDRSTYTTLI 457
           +PD  T T  +
Sbjct: 583 DPDLVTCTIFL 593



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 235/456 (51%), Gaps = 6/456 (1%)

Query: 35  TLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
            +  AY +    E+A  L + M+ +   K    ++NS++N + ++G   RA E  + ++ 
Sbjct: 130 VIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIG 189

Query: 94  ---MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ 150
              + +SP+  T+N ++   C+   + +A ++F +M+ R   PD+ ++ TL+    +  +
Sbjct: 190 AKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADR 249

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNT 210
           +D A+    EM+  G  P  V + ++ING C+ G +  A K+ D M  KGC+ + VTYNT
Sbjct: 250 IDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNT 309

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +++GLC    L +A  L + M+     P+  T+ T+I+G  K G       +  +M ++ 
Sbjct: 310 LIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERG 369

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
              +   Y+TLI G  K G+ ++A  L+ +M  +    N I Y  +I+G C  G   +A 
Sbjct: 370 YCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAV 429

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            +  EM  KG  P   +C++++KG+  +G++ +A E    M       + + Y+ LI+G 
Sbjct: 430 EVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGL 489

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN--P 448
            ++  + +A  + ++M  +G  PDV+ Y+ ++ G    G + D+  +   M+ +G +  P
Sbjct: 490 CKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQP 549

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D  TY  L+N    Q+++  A    + ML RG  PD
Sbjct: 550 DVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPD 585



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 9/339 (2%)

Query: 151 LDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML-EKGCVM--DVVT 207
            DR    F E K  G   ++VL  II     + G    AL+  + ++  KG  +  +V+T
Sbjct: 148 FDRMACEF-ECKRTGKSFNSVLNVII-----QEGLFHRALEFYNHVIGAKGVSISPNVLT 201

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           +N ++  +C+  ++ +A  +F +M  R   PD YT+ TL+ G CK   +++A++L D M 
Sbjct: 202 FNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQ 261

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
                P  VT+N LI+G CK G++ +A KL  +M  +   PN ++Y  LI+G C  G + 
Sbjct: 262 IDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLE 321

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +A  L   MV     P +V+  TII G  + G A      L+ M   G   +   Y+TLI
Sbjct: 322 KAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLI 381

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +G  +E    +A  L  +M  +G   + I Y+ ++ G CR G+  D+  +L  M  KG  
Sbjct: 382 SGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCT 441

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P+  T ++L+ G     N   A     +M +  F  ++ 
Sbjct: 442 PNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEV 480


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 240/485 (49%), Gaps = 2/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L +  ++  A     EM  +G  P    +N +I  +C  G +     L+  M    
Sbjct: 181 LLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFN 240

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   +YN LI G    G+   A ++LDEM + G  P   TYN L+   C   NM +A 
Sbjct: 241 VIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDAR 300

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM + G+  + ++F+ L+  +++ G++D A    REMK+ GLVPD   + I+  G 
Sbjct: 301 RLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGA 360

Query: 181 CRNGFVLEALKMRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            + G  ++    + E+ E  G  +   + + ++  LC    L +A  L    +E+GV   
Sbjct: 361 YKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVS 420

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F  L+  + K+G   +AL ++ +M +  + P   T+N LI G C  G ++ A  L  
Sbjct: 421 VAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLE 480

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            MI +       S+ I ++ Y   G+V  A + W +MV  G++P  ++ +  I G CR  
Sbjct: 481 HMICKGYCVG-TSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLD 539

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
             ++A +   +M   G  P++I+YN+LI+ F R   + +A  L  KM   GL+PDV T N
Sbjct: 540 HVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSN 599

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           +++ GFC++GR+         M   GL PD  TY T+IN +    ++  A  F ++ML  
Sbjct: 600 ILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLAD 659

Query: 480 GFVPD 484
           G  PD
Sbjct: 660 GCEPD 664



 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 242/487 (49%), Gaps = 6/487 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   C    +      L  M +  V PD  +YN LI  Y   G   +AFQL++ M   G
Sbjct: 216 MILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESG 275

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P V TYN L+N LC  G    A+ + DEM+++G+  +T T+N L+    +   M EA 
Sbjct: 276 CQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAY 335

Query: 121 EIFCEMSRRGVAPDIVSFSTLIG---IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
               EM  RG+ PD  +F+ L      F +  QL        EM  + +  D+V   +++
Sbjct: 336 AACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSV--DMVV 393

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
              C +G + +A K+    +E+G  + V  +N ++    +     +A ++++ M + G+ 
Sbjct: 394 CRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLV 453

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P   TF  LI G C  G ++ A  L + M  K       ++   +D + + G +E A K 
Sbjct: 454 PSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVG-TSFTIYMDSYFRSGNVEGALKC 512

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           W DM+   + P++I++   I+G C + HV EA++ + EM G+G  P  ++ N++I  +CR
Sbjct: 513 WDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCR 572

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G  S+A +   KM   G+ PD  + N LI+GF +E  +D        M N GL PDV+T
Sbjct: 573 VGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVT 632

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN I+  +C    M  + + + +M+  G  PD  TY   ++   + + L  A +  DE++
Sbjct: 633 YNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELV 692

Query: 478 QRGFVPD 484
             G +P+
Sbjct: 693 AMGCMPN 699



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 234/466 (50%), Gaps = 40/466 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN LC D  +  A+    EM + G+  +T+T+N L++ Y + G ++EA+     M  +G
Sbjct: 286 LVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARG 345

Query: 61  LKPGVFTYNSLINGLCKKGRC---DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           L P   T+N L  G  K G+       ++ L EM    +S D+   + ++   C    + 
Sbjct: 346 LVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSV--DMVVCRLCWDGRLD 403

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN------- 170
           +A ++ C    +GV   +  F+ L+  +S+ G  ++AL  +  M   GLVP +       
Sbjct: 404 DAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLI 463

Query: 171 --------------VLYTIIINGYC-------------RNGFVLEALKMRDEMLEKGCVM 203
                         +L  +I  GYC             R+G V  ALK  D+M++ G   
Sbjct: 464 MGLCNQGRLDDAQLLLEHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQP 523

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D + ++  ++GLCR   + EA   F EM  RG  P+  T+ +LI   C+ G +++AL L 
Sbjct: 524 DFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLE 583

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M Q  + PD+ T N LIDGFCK G ++  NK + DM +  ++P+ ++Y  +IN YC  
Sbjct: 584 KKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGA 643

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             ++ A     +M+  G +P + + N  +   C +   ++A + L ++V+ G  P+S++Y
Sbjct: 644 QDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTY 703

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           NTL++G +  + +D+A  L  K+      P+ +T NV  + FC+QG
Sbjct: 704 NTLMDG-ICSDVLDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQG 748



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 203/483 (42%), Gaps = 70/483 (14%)

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           ++     G    A  VL  +   G +P  +    LL    R   +  A ++F EM+ RG 
Sbjct: 147 LHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGP 206

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            P +  F+ +I  F   G +   L     M    ++PD   Y I+I GY   G   +A +
Sbjct: 207 RPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQ 266

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + DEM E GC   VVTYN ++N LC    + +A  LF+EM++ G+  +  TF  L+ G+ 
Sbjct: 267 LLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYA 326

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG--------------------------- 284
           K G M++A      M  + + PD  T+N L  G                           
Sbjct: 327 KAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISA 386

Query: 285 ---------FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
                     C  G ++ A KL    I + +  +   +  L+  Y   G   +A  ++  
Sbjct: 387 DSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSV 446

Query: 336 MVGKGIKPTLVSCNTII---------------------KGYC-------------RSGDA 361
           M   G+ P+  + N +I                     KGYC             RSG+ 
Sbjct: 447 MNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGTSFTIYMDSYFRSGNV 506

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A +    MV  GV PD I+++  I+G  R +++++A+    +M  +G VP+ ITYN +
Sbjct: 507 EGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSL 566

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           ++ FCR G + ++  +  +M + GL PD  T   LI+G   +  L    +   +M   G 
Sbjct: 567 ISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGL 626

Query: 482 VPD 484
            PD
Sbjct: 627 TPD 629



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 116/244 (47%), Gaps = 34/244 (13%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ LC+   ++ A     EM  +G  P+ +TYN+LI+A+CR G++ EA +L   M   GL
Sbjct: 532 ISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGL 591

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P VFT N LI+G CK+GR D   +   +M   GL+PD  TYNT++   C  ++MS A  
Sbjct: 592 IPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMI 651

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING-- 179
              +M   G  PDI +++  +     N  L+RA+    E+ + G +P++V Y  +++G  
Sbjct: 652 FMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGIC 711

Query: 180 --------------------------------YCRNGFVLEALKMRDEMLEKGCVMDVVT 207
                                           +C+ GF   AL   +++ E     D  T
Sbjct: 712 SDVLDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDAT 771

Query: 208 YNTI 211
            N +
Sbjct: 772 MNIL 775



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 149/349 (42%), Gaps = 36/349 (10%)

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           + ++ +   G   EAL +   +   G    +     +L  L RA  +  A  +F EM  R
Sbjct: 145 LALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTAR 204

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  P    F  +I G C  G ++  L L  +M + ++ PD  +YN LI G+   G+   A
Sbjct: 205 GPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDA 264

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +L  +M      P  ++Y IL+N  C  G++ +A RL+ EMV  GI+   ++ N ++ G
Sbjct: 265 FQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDG 324

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR---------------------- 392
           Y ++G   +A     +M + G+ PD  ++N L  G  +                      
Sbjct: 325 YAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRI 384

Query: 393 --------------EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
                         +  +D A+ LV     QG+   V  +N ++  + ++G    +  + 
Sbjct: 385 SADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVY 444

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
             M + GL P   T+  LI G  +Q  L +A    + M+ +G+    +F
Sbjct: 445 SVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGTSF 493


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 219/390 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  CK  ++  A+  L EM + GV  + + YN+L++AY RE   +   +++  M  +G
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY  L++GL       + + V +EM    LS D   Y++++   CR  N+  A 
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F E    G+ P+  ++  LI  F + GQ++ A M   +M+  G+  + +++  +I+GY
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   V +AL+++  M + G  +DV TYNT+  GL RA  + EA +L   M+E+GV P+ 
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 388

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++TTLI  HC +G+M +A  LF  M     +P +VTYN ++DG+ K G + +A +   +
Sbjct: 389 VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNE 448

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+  SY  L++G+C  G V  A RL+ EM  +G KP LV+   +I G  + G 
Sbjct: 449 MEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGR 508

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           + +A +    M+ +G+ PD   Y+ L+   
Sbjct: 509 SEEAFQLYDNMLGDGLTPDDALYSALVGSL 538



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 214/387 (55%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +++G CK GR   A+++LDEM + G+  +   YN+LL    R+++     E+   M   G
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + P + +++ L+   S    + +    F EMKS  L  D   Y+ +IN YCR G V  A 
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++ DE +  G   +  TY  ++NG C+   +  A+ L  +M  RGV  +   F T+I G+
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+   ++KAL +  IM +  I+ D+ TYNTL  G  +   M++A  L   MI + + PN+
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 388

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +SY  LI+ +C+ G + EA RL+ EM G G +P+LV+ N ++ GY + G   +A+ F ++
Sbjct: 389 VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNE 448

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  +G+ PD  SY  L++G      +D A  L  +M+ +G  P+++ Y  +++G  ++GR
Sbjct: 449 MEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGR 508

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLI 457
             ++  +   M+  GL PD + Y+ L+
Sbjct: 509 SEEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 212/398 (53%), Gaps = 3/398 (0%)

Query: 28  PDTVT---YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           PD+VT    + +++ YC+ G +  A QL++ M   G+K     YNSL++   ++   DR 
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            E+L  M   G+ P   TY  L+       ++++ E +F EM  + ++ D+  +S++I  
Sbjct: 198 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 257

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + R G + RA   F E    G+ P+   Y  +ING+C+ G +  A  +  +M  +G  ++
Sbjct: 258 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 317

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            + +NT+++G CR  M+ +A ++   M + G+  D YT+ TL  G  +   M++A NL  
Sbjct: 318 QIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLR 377

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           IM +K ++P+ V+Y TLI   C  G+M +A +L+ +M      P+ ++Y ++++GY   G
Sbjct: 378 IMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKG 437

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA R   EM  KG+ P + S   ++ G+C +G    A     +M   G  P+ ++Y 
Sbjct: 438 SIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYT 497

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            LI+G  +E   ++AF L   M   GL PD   Y+ ++
Sbjct: 498 ALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 236/464 (50%), Gaps = 11/464 (2%)

Query: 30  TVTYNTLINAYCREGFLEEA---FQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKE 86
           T  Y+ L  AY   G    A   F+L  S  G GL P   T + L       G  D A +
Sbjct: 72  TAFYDMLFRAYADSGAAARAAEAFELTVSRLG-GLDPRSLTSSLLSLRRA--GHLDTAAD 128

Query: 87  VLDEMLQMGLSPDTAT--YNTLLVES-CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
           +L +       PD+ T    +++V+  C+   ++ A ++  EM R GV  + + +++L+ 
Sbjct: 129 LLKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLD 186

Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
            ++R    DR     + M++ G+ P    YTI+++G      + +   + +EM  K    
Sbjct: 187 AYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSG 246

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           DV  Y++++N  CRA  +  A ++F+E +  G+ P+ +T+  LI+G CK G M  A  L 
Sbjct: 247 DVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLV 306

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M  + +  + + +NT+IDG+C+   ++KA ++   M    I  +  +Y  L  G    
Sbjct: 307 TDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRA 366

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             + EA  L   M+ KG++P  VS  T+I  +C  GD  +A     +M   G +P  ++Y
Sbjct: 367 NRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTY 426

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           N +++G++++ ++ +A    ++ME +GLVPD+ +Y  ++ G C  G++  +  +   M +
Sbjct: 427 NVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQ 486

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
           +G  P+   YT LI+G   +   +EAF+ +D ML  G  PDDA 
Sbjct: 487 RGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDAL 530



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 150/257 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++++A+M + +M+ +GV  + + +NT+I+ YCR+  +++A ++   M   G
Sbjct: 289 LINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMG 348

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V+TYN+L  GL +  R D AK +L  M++ G+ P+  +Y TL+   C + +M EA 
Sbjct: 349 IELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEAR 408

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+  G  P +V+++ ++  + + G +  A  +  EM+  GLVPD   Y  +++G+
Sbjct: 409 RLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGH 468

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C NG V  AL++ +EM ++G   ++V Y  +++GL +     EA  L++ ML  G+ PD 
Sbjct: 469 CVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDD 528

Query: 241 YTFTTLIHGHCKDGNMN 257
             ++ L+     D   N
Sbjct: 529 ALYSALVGSLHTDKKQN 545


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 229/462 (49%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G+  DT+T N +IN  CR   +   F ++ +M   GL+P V T  +LINGLC +G   +A
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQA 166

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             + D M +M    D  TY  L+   C+  +   A     +M  R   P++V +ST++  
Sbjct: 167 VGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDG 226

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
             ++G +  AL    EM   G+ P+ V Y  +I G C  G   EA  + DEM++ G   D
Sbjct: 227 LCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPD 286

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           +   N +++  C+   + +A  +   M+  G  PD +T+ +LIH +C    MN+A+ +F 
Sbjct: 287 LQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           +M  +   PDIV + +LI G+CK   + KA  L  +M      P+  ++  LI G+C  G
Sbjct: 347 LMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAG 406

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               A  L+  M   G  P L +C  I+ G C+    S+A      M    +D + + Y+
Sbjct: 407 RPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYS 466

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L++G      ++ A+ L S +  +GL  +V  Y +++ G C+QG +  +E +L  M E 
Sbjct: 467 ILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEEN 526

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           G  P+  TY   + G +++  +  + ++   M  +GF  D A
Sbjct: 527 GCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAA 568



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 143/458 (31%), Positives = 237/458 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+   +      L  M + G+ P  +T  TLIN  C +G + +A  L + M    
Sbjct: 118 VINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMW 177

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
               V+TY  LINGLCK G    A   L +M +    P+   Y+T++   C+   +SEA 
Sbjct: 178 YPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEAL 237

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM+ +GV P++V+++ LI      G+   A     EM   G+ PD  +  I+++ +
Sbjct: 238 NLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAF 297

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V++A  +   M+  G   DV TYN++++  C    + EA  +F+ M+ RG  PD 
Sbjct: 298 CKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDI 357

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             FT+LIHG CKD N+NKA++L + M++    PD+ T+ TLI GFC+ G    A +L+ +
Sbjct: 358 VVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLN 417

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +  ++++G C    ++EA  L   M    +   +V  + ++ G C +G 
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E  S +  +G+  +   Y  +I G  ++ ++DKA  L+  ME  G +P+  TYNV
Sbjct: 478 LNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNV 537

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
            + G   +  +  S   L  M +KG + D +T   +IN
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIIN 575



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 233/480 (48%), Gaps = 1/480 (0%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGKGLKPGV 65
           K   ID A      M +    P    +  L+ A  R      A  L+  M S  G++   
Sbjct: 53  KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            T N +IN LC+         VL  M ++GL P   T  TL+   C + N+++A  +   
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADH 172

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M +     D+ ++  LI    + G    A+ + R+M+     P+ V+Y+ I++G C++G 
Sbjct: 173 MEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGL 232

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V EAL +  EM  KG   ++VTY  ++ GLC      EA  L +EM++ G+ PD      
Sbjct: 233 VSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNI 292

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L+   CK+G + +A ++   M      PD+ TYN+LI  +C   +M +A +++  M+SR 
Sbjct: 293 LVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG 352

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ + +  LI+G+C   ++ +A  L  EM   G  P + +  T+I G+C++G    A 
Sbjct: 353 RLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAK 412

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E    M   G  P+  +   +++G  +E  + +A +L   ME   L  +++ Y+++L G 
Sbjct: 413 ELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGM 472

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           C  G+++ +  +   +  KGL  +   YT +I G   Q +L +A      M + G +P++
Sbjct: 473 CSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNN 532



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 199/403 (49%), Gaps = 35/403 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK     +A  +L +ME++   P+ V Y+T+++  C++G + EA  L + M+GKG
Sbjct: 188 LINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKG 247

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P + TY  LI GLC  GR   A  +LDEM++MG+ PD    N L+   C++  + +A+
Sbjct: 248 VRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAK 307

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M   G  PD+ ++++LI I+    +++ A+  F  M S G +PD V++T +I+G+
Sbjct: 308 SVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGW 367

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++  + +A+ + +EM + G V DV T+ T++ G C+A     A +LF  M + G  P+ 
Sbjct: 368 CKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNL 427

Query: 241 YT-----------------------------------FTTLIHGHCKDGNMNKALNLFDI 265
            T                                   ++ L+ G C  G +N A  LF  
Sbjct: 428 QTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSS 487

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +  K ++ ++  Y  +I G CK G ++KA  L  +M      PN  +Y + + G  +   
Sbjct: 488 LPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKE 547

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           +  + +    M  KG      +   II     +   +K  EFL
Sbjct: 548 IARSIKYLTIMRDKGFSVDAATTEFIINYLSTNEGDTKIREFL 590



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 196/380 (51%), Gaps = 3/380 (0%)

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAG 165
           L  S + +N+ EA ++F  M+R    P +  F+ L+G   R      A+   + M  S G
Sbjct: 48  LCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLG 107

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           +  D +   I+IN  CR   V     +   M + G    V+T  T++NGLC    + +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAV 167

Query: 226 DLFNEMLERGVFP-DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            L + M E+  +P D YT+  LI+G CK G+   A+     M +++ KP++V Y+T++DG
Sbjct: 168 GLADHM-EKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDG 226

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CK G + +A  L ++M  + + PN ++Y  LI G C+ G   EA  L  EM+  G++P 
Sbjct: 227 LCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPD 286

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           L   N ++  +C+ G   +A   +  M+  G  PD  +YN+LI+ +  +  M++A  +  
Sbjct: 287 LQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
            M ++G +PD++ +  ++ G+C+   ++ +  +L  M + G  PD +T+TTLI G     
Sbjct: 347 LMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAG 406

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
               A      M + G VP+
Sbjct: 407 RPLAAKELFLNMHKYGQVPN 426


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 259/498 (52%), Gaps = 15/498 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG---VYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           M+  L +   ++ A+ FL  ++++    V  +   +N+LI +Y + G  +E+ Q+ NSM 
Sbjct: 124 MLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMK 183

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-GLSPDTATYNTLLVESCRKENM 116
             G+ P V T+NSL+  L K+GR + A+ V DEML   G++PDT T+N L+   C+   +
Sbjct: 184 SVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMV 243

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYT 174
            E    F EMSR    PD+V+++TL+    R G+++ A      M  KS  L PD V YT
Sbjct: 244 DEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYT 303

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            ++ GYC    + EAL + +EM+ KG   + +TYNT++ GLC  + + +   +F   L  
Sbjct: 304 TLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGG 363

Query: 235 GVF-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           G F PD  T  TL++ HC  GN+N AL +F+ M   +++PD  TY+ LI   C+ G  E+
Sbjct: 364 GGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFER 423

Query: 294 ANKLWADMISRKI-------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           A +L+ ++  ++I       +P   +Y  +    C  G   +A R++ +++ +G +  L 
Sbjct: 424 AEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPL- 482

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           S   +IKG+CR G      E L  M+     PD  +Y +LI+G +++     A+  + KM
Sbjct: 483 SFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKM 542

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
                VP+  T++ IL     +G  H+S   +  M+E  +  + +  T  +         
Sbjct: 543 IKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLR 602

Query: 467 KEAFRFHDEMLQRGFVPD 484
            +AF+    +   G+V D
Sbjct: 603 DKAFKIVGLLYANGYVVD 620



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 235/493 (47%), Gaps = 27/493 (5%)

Query: 5   LCKDHKIDSAKMFLCEM-EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           L K  + + A+    EM    GV PDT T+N LI  +C+   ++E F+    MS     P
Sbjct: 201 LLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDP 260

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQ--MGLSPDTATYNTLLVESCRKENMSEAEE 121
            + TYN+L++GLC+ G+ + A  V++ M++    L+PD  TY TL+   C K  + EA  
Sbjct: 261 DLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALV 320

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR-EMKSAGLVPDNVLYTIIINGY 180
           +F EM  +G+ P+ ++++TLI       ++D+    F   +   G +PD      ++N +
Sbjct: 321 VFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAH 380

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER------ 234
           C  G + +AL++ ++M+      D  TY+ ++  LC+      A+ LF+E+ E+      
Sbjct: 381 CNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRD 440

Query: 235 -GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G  P    + ++    C++G   KA  +F  + ++  + D +++  LI G C+ G  E 
Sbjct: 441 DGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEA 499

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
             +L   M+ R   P+  +Y  LI+G    G    A++   +M+     P   + ++I+ 
Sbjct: 500 GYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILA 559

Query: 354 GYCRSGDASKADEFLSKM----VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
                G A ++  F+  M    + + ++  + +   L    +R    DKAF +V  +   
Sbjct: 560 RLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLR----DKAFKIVGLLYAN 615

Query: 410 GLVPDVITYNVILTGFCRQGR--MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
           G V D+      L GF    R  +   +L+L+  +EK  N D     T+I G        
Sbjct: 616 GYVVDMEE----LIGFLSHNRKFLLAHKLLLF-CLEKHQNVDIDMCDTVIEGLCKMKRHS 670

Query: 468 EAFRFHDEMLQRG 480
           EAF  + E++++G
Sbjct: 671 EAFGLYYELVEKG 683



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 212/456 (46%), Gaps = 47/456 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG--VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG 58
           +V+ LC+  K++ A   +  M +K   + PD VTY TL+  YC +  ++EA  +   M  
Sbjct: 268 LVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVS 327

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMS 117
           KGLKP   TYN+LI GLC+  + D+ K++ +  L   G  PDT T NTL+   C   N++
Sbjct: 328 KGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLN 387

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
           +A E+F +M    V PD  ++S LI    + G  +RA   F E+    ++          
Sbjct: 388 DALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEIL---------- 437

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
                         +RD+    GC   V  Y ++   LCR     +A+ +F ++++RG  
Sbjct: 438 --------------LRDD----GCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGT- 478

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            D  +F  LI GHC++G       L  +M ++   PD+ TY +LIDG  + GE   A + 
Sbjct: 479 QDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQT 538

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              MI     P   ++  ++    + G   E+ R    M+   I+  +      ++    
Sbjct: 539 LEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFG 598

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM------ENQGL 411
           SG   KA + +  + + G   D      LI GF+   + ++ F L  K+      ++Q +
Sbjct: 599 SGLRDKAFKIVGLLYANGYVVD---MEELI-GFL---SHNRKFLLAHKLLLFCLEKHQNV 651

Query: 412 VPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
             D+   + ++ G C+  R  ++  + + ++EKG N
Sbjct: 652 --DIDMCDTVIEGLCKMKRHSEAFGLYYELVEKGNN 685



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 155/306 (50%), Gaps = 7/306 (2%)

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG---VFPDFYTFT 244
           +AL+  +   E G   +  +Y  +L  L RA+ L  A +    +  R    V  +   F 
Sbjct: 101 KALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFN 160

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           +LI  + K G   +++ +F+ M    + P +VT+N+L+    K G    A  ++ +M+S 
Sbjct: 161 SLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLST 220

Query: 305 -KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
             ++P+  ++ ILI G+C    V E FR + EM      P LV+ NT++ G CR+G  + 
Sbjct: 221 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNI 280

Query: 364 ADEFLSKMV--SEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
           A   ++ MV  S  ++PD ++Y TL+ G+  +  +D+A  +  +M ++GL P+ ITYN +
Sbjct: 281 AHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTL 340

Query: 422 LTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + G C   ++   + I    +  G   PD  T  TL+N H +  NL +A    ++M+   
Sbjct: 341 IKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLN 400

Query: 481 FVPDDA 486
             PD A
Sbjct: 401 VRPDSA 406


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 219/390 (56%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+  CK  ++  A+  L EM + GV  + + YN+L++AY RE   +   +++  M  +G
Sbjct: 73  VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 132

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V TY  L++GL       + + V +EM    LS D   Y++++   CR  N+  A 
Sbjct: 133 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 192

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F E    G+ P+  ++  LI  F + GQ++ A M   +M+  G+  + +++  +I+GY
Sbjct: 193 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 252

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   V +AL+++  M + G  +DV TYNT+  GL RA  + EA +L   M+E+GV P+ 
Sbjct: 253 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 312

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++TTLI  HC +G+M +A  LF  M     +P +VTYN ++DG+ K G + +A +   +
Sbjct: 313 VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNE 372

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  + + P+  SY  L++G+C  G V  A RL+ EM  +G KP LV+   +I G  + G 
Sbjct: 373 MEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGR 432

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF 390
           + +A +    M+ +G+ PD   Y+ L+   
Sbjct: 433 SEEAFQLYDNMLGDGLTPDDALYSALVGSL 462



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 214/387 (55%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +++G CK GR   A+++LDEM + G+  +   YN+LL    R+++     E+   M   G
Sbjct: 73  VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 132

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           + P + +++ L+   S    + +    F EMKS  L  D   Y+ +IN YCR G V  A 
Sbjct: 133 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 192

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           ++ DE +  G   +  TY  ++NG C+   +  A+ L  +M  RGV  +   F T+I G+
Sbjct: 193 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 252

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+   ++KAL +  IM +  I+ D+ TYNTL  G  +   M++A  L   MI + + PN+
Sbjct: 253 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 312

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           +SY  LI+ +C+ G + EA RL+ EM G G +P+LV+ N ++ GY + G   +A+ F ++
Sbjct: 313 VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNE 372

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  +G+ PD  SY  L++G      +D A  L  +M+ +G  P+++ Y  +++G  ++GR
Sbjct: 373 MEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGR 432

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLI 457
             ++  +   M+  GL PD + Y+ L+
Sbjct: 433 SEEAFQLYDNMLGDGLTPDDALYSALV 459



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 212/398 (53%), Gaps = 3/398 (0%)

Query: 28  PDTVT---YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           PD+VT    + +++ YC+ G +  A QL++ M   G+K     YNSL++   ++   DR 
Sbjct: 62  PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 121

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            E+L  M   G+ P   TY  L+       ++++ E +F EM  + ++ D+  +S++I  
Sbjct: 122 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 181

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + R G + RA   F E    G+ P+   Y  +ING+C+ G +  A  +  +M  +G  ++
Sbjct: 182 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 241

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            + +NT+++G CR  M+ +A ++   M + G+  D YT+ TL  G  +   M++A NL  
Sbjct: 242 QIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLR 301

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           IM +K ++P+ V+Y TLI   C  G+M +A +L+ +M      P+ ++Y ++++GY   G
Sbjct: 302 IMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKG 361

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            + EA R   EM  KG+ P + S   ++ G+C +G    A     +M   G  P+ ++Y 
Sbjct: 362 SIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYT 421

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
            LI+G  +E   ++AF L   M   GL PD   Y+ ++
Sbjct: 422 ALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 459



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 217/412 (52%), Gaps = 5/412 (1%)

Query: 79  GRCDRAKEVLDEMLQMGLSPDTAT--YNTLLVES-CRKENMSEAEEIFCEMSRRGVAPDI 135
           G  D A ++L +       PD+ T    +++V+  C+   ++ A ++  EM R GV  + 
Sbjct: 45  GHLDTAADLLKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 102

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           + +++L+  ++R    DR     + M++ G+ P    YTI+++G      + +   + +E
Sbjct: 103 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 162

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M  K    DV  Y++++N  CRA  +  A ++F+E +  G+ P+ +T+  LI+G CK G 
Sbjct: 163 MKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQ 222

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
           M  A  L   M  + +  + + +NT+IDG+C+   ++KA ++   M    I  +  +Y  
Sbjct: 223 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 282

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           L  G      + EA  L   M+ KG++P  VS  T+I  +C  GD  +A     +M   G
Sbjct: 283 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 342

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
            +P  ++YN +++G++++ ++ +A    ++ME +GLVPD+ +Y  ++ G C  G++  + 
Sbjct: 343 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 402

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
            +   M ++G  P+   YT LI+G   +   +EAF+ +D ML  G  PDDA 
Sbjct: 403 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDAL 454



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 150/257 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK  ++++A+M + +M+ +GV  + + +NT+I+ YCR+  +++A ++   M   G
Sbjct: 213 LINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMG 272

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V+TYN+L  GL +  R D AK +L  M++ G+ P+  +Y TL+   C + +M EA 
Sbjct: 273 IELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEAR 332

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+  G  P +V+++ ++  + + G +  A  +  EM+  GLVPD   Y  +++G+
Sbjct: 333 RLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGH 392

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C NG V  AL++ +EM ++G   ++V Y  +++GL +     EA  L++ ML  G+ PD 
Sbjct: 393 CVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDD 452

Query: 241 YTFTTLIHGHCKDGNMN 257
             ++ L+     D   N
Sbjct: 453 ALYSALVGSLHTDKKQN 469


>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 248/491 (50%), Gaps = 21/491 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K    DS      +M  +   P  +TY  L+N  C +G    A ++ + M  +G
Sbjct: 10  LLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKVFDEMLERG 69

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL-SPDTATYNTLLVESCRKENMSEA 119
           ++P V  Y          G+   A+ V   M + G+ +P+  TY TL+       ++   
Sbjct: 70  IEPNVVIY----------GQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDVKRV 119

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++C+M + G+ PD+V+F+TLI +  + G L  A   F  M    +VP+   Y  +I+G
Sbjct: 120 FYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHG 179

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YC+ G +LEA+ +R EM   G   DVVTYN ++ GLC    L EA  L  +M E  VF +
Sbjct: 180 YCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFAN 239

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              F  +I G CK G+M KA+ +   MT++ I+P+++T++ LIDGFC  G +  A  L+ 
Sbjct: 240 SVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYT 299

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+ + I P+ ++Y  LI+G+C +G+  EAFRL  EM+  G+ P + + + +I G  + G
Sbjct: 300 EMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDG 359

Query: 360 DASKADEFL----------SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
             + A +             KM S    P+S+ Y  LI G   +  + KA    ++M+  
Sbjct: 360 RTNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWN 419

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           G  PD++ Y  +L    +   M D  ++   M++ G+  +   Y  L  G+     LK A
Sbjct: 420 GFKPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRGYRENGYLKSA 479

Query: 470 FRFHDEMLQRG 480
               + +++ G
Sbjct: 480 LMCSEYLMEYG 490



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 185/353 (52%), Gaps = 11/353 (3%)

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
           P +   + L+    +    D     + +M S    P  + Y I++N  C  G    A K+
Sbjct: 2   PTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKV 61

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-PDFYTFTTLIHGHC 251
            DEMLE+G   +VV Y            + EA+ +F  M E GV  P+ YT+ TL+ G+ 
Sbjct: 62  FDEMLERGIEPNVVIYGQ----------MGEAEGVFGRMRESGVVTPNLYTYKTLMDGYS 111

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
             G++ +   L+  M +  + PD+VT+ TLID   K+G+++ A   +A M    + PN  
Sbjct: 112 MMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGH 171

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  LI+GYC  G + EA  L  EM   GI   +V+ N +IKG C      +A   + KM
Sbjct: 172 AYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKM 231

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
               V  +S+ +N +I+G  +  +M+KA  + S+M  + + P+VIT+++++ GFC +G +
Sbjct: 232 DEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNV 291

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +  +   M+ KG+ PD  TYT LI+GH    N KEAFR H EML  G  P+
Sbjct: 292 RAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPN 344



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 192/388 (49%), Gaps = 11/388 (2%)

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
           P     N LL    + +      E++ +M  R  +P ++++  L+      G    A   
Sbjct: 2   PTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKV 61

Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLC 216
           F EM   G+ P+ V+Y          G + EA  +   M E G V  ++ TY T+++G  
Sbjct: 62  FDEMLERGIEPNVVIY----------GQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYS 111

Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
               +     L+ +ML+ G++PD  TF TLI    K G++  A N F  M +  + P+  
Sbjct: 112 MMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGH 171

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
            YN+LI G+CK G++ +A  L  +M    I  + ++Y ILI G C +  + EA  L  +M
Sbjct: 172 AYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKM 231

Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
               +    V  N +I G C+ GD  KA E  S+M  E ++P+ I+++ LI+GF  + N+
Sbjct: 232 DEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNV 291

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
             A  L ++M  +G+VPDV+TY  ++ G C+ G   ++  +   M++ GL+P+  T + +
Sbjct: 292 RAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCV 351

Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           I+G +      +A +   E    G+  D
Sbjct: 352 IDGLLKDGRTNDAIKMFLEKTGAGYPGD 379


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 229/451 (50%), Gaps = 1/451 (0%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           + ++  +   G  +EA  ++  M   GL   V T N +     + G    A+ V DEM  
Sbjct: 165 DCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRV 224

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
            G+ PD+ +Y  + +  CR   +S+ +    +M RRG   D  + + +I  F   G   R
Sbjct: 225 RGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASR 284

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
              YF +    GL P+ + +T +ING C+ G + +A +M +EM++KG   +V T+  +++
Sbjct: 285 VFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALID 344

Query: 214 GLCRAKMLTEADDLFNEMLERGVF-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
           GLC+     +A  LF +++    + P+ +T+T++IHG+CK+  +N+A  L   M ++ + 
Sbjct: 345 GLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLV 404

Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
           P+  TY  LIDG  K G  EKA +L   M     S N  +Y   I+  C  G   EA +L
Sbjct: 405 PNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKL 464

Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
             +    G++   V+   +I   CR  D  +A  F SKM   GV PD  +YNTLI  F R
Sbjct: 465 LKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSR 524

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           +  M+++  L ++    GLVP   TY  ++ G+CR   +  +     RM + G  PD  T
Sbjct: 525 QRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLT 584

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           Y  LI+G   ++ L EA + ++ M+ +G  P
Sbjct: 585 YGALISGLCKESKLDEACQLYEAMVDKGLSP 615



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 207/408 (50%), Gaps = 1/408 (0%)

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           G+   A  ++ EM   GL     T N +   +     +  AE +F EM  RGV PD VS+
Sbjct: 175 GKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSY 234

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
             +   + R G++     + ++M   G V DN   T++I+ +C  GF        D+ +E
Sbjct: 235 KLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVE 294

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G   +++ + +++NGLC+   + +A ++  EM+++G  P+ YT T LI G CK G   K
Sbjct: 295 LGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEK 354

Query: 259 ALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           A  LF  ++     KP++ TY ++I G+CK  ++ +A  L + M  + + PN  +Y  LI
Sbjct: 355 AFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLI 414

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G+   G+  +A+ L   M  +G    + + N  I   C+ G   +A + L K    G+ 
Sbjct: 415 DGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQ 474

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
            D+++Y  LI+   R  +  +A    SKM   G+ PD+ TYN ++  F RQ RM +SE +
Sbjct: 475 ADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKL 534

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
               +  GL P + TYT++I G+    N+  A +F + M   G  PD 
Sbjct: 535 FAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDS 582



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 231/461 (50%), Gaps = 4/461 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM  +GV PD+V+Y  +  AYCR G + +  + +  M  +G      T   +I+  C+KG
Sbjct: 221 EMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKG 280

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              R     D+ +++GL P+   + +L+   C++ ++ +A E+  EM ++G  P++ + +
Sbjct: 281 FASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHT 340

Query: 140 TLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
            LI    + G  ++A  ++ + ++S    P+   YT +I+GYC+   +  A  +   M E
Sbjct: 341 ALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKE 400

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
           +G V +  TY  +++G  +A    +A +L + M + G   + +T+   I   CK G   +
Sbjct: 401 QGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLE 460

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  L     +  ++ D VTY  LI   C+  +  +A   ++ M    + P+  +Y  LI 
Sbjct: 461 ACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIA 520

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            +     + E+ +L+ E VG G+ PT  +  ++I GYCR  + S A +F ++M   G  P
Sbjct: 521 AFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTP 580

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           DS++Y  LI+G  +E  +D+A  L   M ++GL P  +T   +   +C+Q     + +IL
Sbjct: 581 DSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVIL 640

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            R+ +K       T  TLI    S+  +  A  F  ++L +
Sbjct: 641 ERLDKKLWI---RTVNTLIRKLCSERKVGMAVLFFHKLLDK 678



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 209/410 (50%), Gaps = 8/410 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQL-MNSMSGK 59
           ++N LCK   I  A   L EM +KG  P+  T+  LI+  C++G+ E+AF+L +  +   
Sbjct: 307 LINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD 366

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
             KP V TY S+I+G CK+ + +RA+ +L  M + GL P+T TY  L+    +  N  +A
Sbjct: 367 DYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKA 426

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+   M + G + +I +++  I    + G+   A    ++    GL  D V YTI+I+ 
Sbjct: 427 YELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISE 486

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR     EAL    +M + G   D+ TYNT++    R + + E++ LF E +  G+ P 
Sbjct: 487 LCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPT 546

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T++I G+C+D N++ AL  F+ M+     PD +TY  LI G CK  ++++A +L+ 
Sbjct: 547 KETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYE 606

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            M+ + +SP  ++   L   YC       A  +  E + K  K  + + NT+I+  C   
Sbjct: 607 AMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVI-LERLDK--KLWIRTVNTLIRKLCSER 663

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
               A  F  K++ +  + D ++    +  F         +ALVS +  +
Sbjct: 664 KVGMAVLFFHKLLDKDQNVDRVT----LTAFTTACYESNKYALVSDLSER 709



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 49/103 (47%)

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           + ++  F       +A  +V +MEN GLV  V T N +       G +  +E +   M  
Sbjct: 165 DCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRV 224

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +G+ PD  +Y  +   +     + +  R+  +M++RGFV D+A
Sbjct: 225 RGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNA 267


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 233/469 (49%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL K + +D A +   +M      PD  TYN LI+  CR G ++EA +L+  M G G
Sbjct: 223 VIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLG 282

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTY  LI+G     + D A  VL+ M    +SP  AT  + +    R    ++A 
Sbjct: 283 YSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAF 342

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  E   R      ++  TL+   S       A    ++    G  PD+  + I +N  
Sbjct: 343 ELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCL 402

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + E   + D  +E+G      TY  ++  L  A  +TE +  FN+M++ G+  + 
Sbjct: 403 IKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNV 462

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            ++  +I   CK   M+KA N F  M  K I P++VT+NTLIDG+CK GE+ K+  L   
Sbjct: 463 CSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVM 522

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++     P+  ++  +I+G C    + +A   + EMV  G+ P  V+ N +I   C  GD
Sbjct: 523 LLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGD 582

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             ++ + L KM ++G++PD  S+N LI  F R   ++ A  L S M + GL+PD  TY  
Sbjct: 583 VPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVA 642

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            +  FC+ GR ++++ +   M   G  PD  T   +++  V Q+  + A
Sbjct: 643 FIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAA 691



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 227/465 (48%), Gaps = 10/465 (2%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           G+ P T  YN +I+A  +   L+ A+     MS    KP  FTYN LI+G+C+ G  D A
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-G 143
             ++ +M  +G SP+  TY  L+      + + EA  +   M  R V+P   +  + I G
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331

Query: 144 IF---SRNGQLDRALMYF-REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           +F   + N   + A+ +  RE     L  D +L  +      R     EA  +  +  + 
Sbjct: 332 VFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAR-----EAGALLKKFGKI 386

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   D  T+N  +N L +   L E  ++ +  +E+G+   F T+  LI      G + + 
Sbjct: 387 GHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEG 446

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            + F+ M +  +  ++ +YN +ID FCK   M+KA   + +M  + I PN +++  LI+G
Sbjct: 447 NHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDG 506

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           YC  G + ++  L   ++  G KP + + ++II G CR+     A    S+MV  G+ P+
Sbjct: 507 YCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPN 566

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           +++YN LI+      ++ ++  L+ KM+  G+ PDV ++N ++  FCR G++ D++ +  
Sbjct: 567 AVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFS 626

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M+  GL PD  TY   I          EA      M   G +PD
Sbjct: 627 SMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPD 671



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 216/450 (48%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           LI ++ R G  +   ++   +S  G+ P    YN++I+ L K    D A     +M    
Sbjct: 188 LIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADN 247

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
             PD  TYN L+   CR   + EA  +  +M   G +P++ +++ LI  F    ++D A 
Sbjct: 248 CKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAF 307

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
                MK+  + P        I+G  R     +A ++  E +E+  V+  +  +T+L  L
Sbjct: 308 RVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCL 367

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
               M  EA  L  +  + G  PD  TF   ++   K  ++N+  N+ D   ++ +K   
Sbjct: 368 SSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGF 427

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
            TY  LI      G++ + N  +  M+   +  N  SY ++I+ +C    + +A   + E
Sbjct: 428 STYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKE 487

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M  KGI P LV+ NT+I GYC+ G+  K+ + L  ++  G  PD  +++++I+G  R + 
Sbjct: 488 MQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQ 547

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
           ++ A    S+M   GL P+ +TYN+++   C  G +  S  +L +M   G+NPD  ++  
Sbjct: 548 IEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNA 607

Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           LI        +++A +    ML  G +PD+
Sbjct: 608 LIQSFCRMGKVEDAKKLFSSMLSLGLIPDN 637



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 211/447 (47%), Gaps = 35/447 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ +C+   +D A   + +ME  G  P+  TY  LI+ +     ++EAF+++ +M  + 
Sbjct: 258 LIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARK 317

Query: 61  LKPGVFTYNSLING-----------------------------------LCKKGRCDRAK 85
           + P   T  S I+G                                   L  K     A 
Sbjct: 318 VSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAG 377

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +L +  ++G  PD+AT+N  +    +  +++E   I      +G+     ++  LI   
Sbjct: 378 ALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKAL 437

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G++     YF +M   GL+ +   Y ++I+ +C+   + +A     EM  KG   ++
Sbjct: 438 YMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNL 497

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           VT+NT+++G C+   + ++ DL   +LE G  PD +TF+++I G C+   +  AL  F  
Sbjct: 498 VTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSE 557

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M    + P+ VTYN LI   C +G++ ++ KL   M +  I+P+  S+  LI  +C MG 
Sbjct: 558 MVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGK 617

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +A +L+  M+  G+ P   +    IK +C+SG  ++A E    M + G  PDS + N 
Sbjct: 618 VEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNI 677

Query: 386 LINGFVREENMDKAFALVSKMENQGLV 412
           +++  V+++  + A  +       G++
Sbjct: 678 ILDALVKQDQFEAAQKIAKTCSEWGIL 704



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 130/240 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +D A     EM+ KG+ P+ VT+NTLI+ YC+ G + ++  L+  +   G
Sbjct: 468 VIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHG 527

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP +FT++S+I+GLC+  + + A     EM+  GLSP+  TYN L+   C   ++  + 
Sbjct: 528 FKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSM 587

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M   G+ PD+ SF+ LI  F R G+++ A   F  M S GL+PDN  Y   I  +
Sbjct: 588 KLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVF 647

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++G   EA ++   M   GC+ D  T N IL+ L +      A  +     E G+  +F
Sbjct: 648 CQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVNF 707



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 144/314 (45%)

Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
           D  +  ++ N   R G V+ ++++  ++   G  ++      ++    R  +    D++F
Sbjct: 146 DQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIF 205

Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
            ++   G+ P    +  +I    K  +++ A   F  M+  + KPD  TYN LI G C+ 
Sbjct: 206 GQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRS 265

Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
           G +++A +L   M     SPN  +Y ILI+G+ +   V EAFR+   M  + + P+  + 
Sbjct: 266 GVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATI 325

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
            + I G  R    +KA E   + +        ++ +TL+     +    +A AL+ K   
Sbjct: 326 RSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGK 385

Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
            G  PD  T+N+ +    +   +++   IL R +E+G+    STY  LI        + E
Sbjct: 386 IGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTE 445

Query: 469 AFRFHDEMLQRGFV 482
              + ++M++ G +
Sbjct: 446 GNHYFNQMVKDGLL 459



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 87/190 (45%)

Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
           +W   +    + +    G+L N     G V  +  L  ++   G +        +I  + 
Sbjct: 134 IWVSNMDPLFAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWG 193

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
           R G A   DE   ++   G+ P +  YN +I+  V+  ++D A+    +M      PD  
Sbjct: 194 RLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRF 253

Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
           TYN+++ G CR G + ++  ++ +M   G +P+  TYT LI+G  +   + EAFR  + M
Sbjct: 254 TYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETM 313

Query: 477 LQRGFVPDDA 486
             R   P +A
Sbjct: 314 KARKVSPSEA 323



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 74/139 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++LC    +  +   L +M+  G+ PD  ++N LI ++CR G +E+A +L +SM   G
Sbjct: 573 LIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLG 632

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P  +TY + I   C+ GR + AKE+   M   G  PD+ T N +L    +++    A+
Sbjct: 633 LIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQ 692

Query: 121 EIFCEMSRRGVAPDIVSFS 139
           +I    S  G+  +  + S
Sbjct: 693 KIAKTCSEWGILVNFAAIS 711


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 257/481 (53%), Gaps = 2/481 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L K      A+  L  M+++G+Y     +  ++ +Y R G L +A +++  M   G
Sbjct: 216 MLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAG 275

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +   N+ I+   +  R ++A   L+ M  +G+ P+  TYN ++   C    + EA 
Sbjct: 276 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 335

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
           E+  +M  +G  PD VS+ T++G   +  ++       ++M K  GLV D V Y  +I+ 
Sbjct: 336 ELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHM 395

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-VFP 238
             ++    EAL    +  EKG  +D V Y+ I++ LC+   ++EA DL NEML +G   P
Sbjct: 396 LTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 455

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+T +++G C+ G ++KA  L  IM     KP+ V+Y  L++G C+ G+  +A ++ 
Sbjct: 456 DVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMM 515

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
                +  SPN I+Y +L++G    G ++EA  +  EMV KG  P  V  N +++  CR 
Sbjct: 516 NMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 575

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A +F+ + +++G   + +++ T+I+GF + + +D A +++  M       DV TY
Sbjct: 576 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 635

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++    ++GR+ ++  ++ +M+ KG++P   TY T+I+ +     + +     ++M+ 
Sbjct: 636 TTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMIL 695

Query: 479 R 479
           R
Sbjct: 696 R 696



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 205/410 (50%), Gaps = 8/410 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K    D A  FL + E+KG   D V Y+ +++A C+EG + EA  L+N M  KG
Sbjct: 392 LIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKG 451

Query: 61  -LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
              P V TY +++NG C+ G  D+AK++L  M   G  P+T +Y  LL   CR     EA
Sbjct: 452 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEA 511

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            E+      +  +P+ +++S L+    + G+L  A    REM   G  P  V   +++  
Sbjct: 512 REMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQS 571

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            CR+G   EA K  +E L KGC ++VV + T+++G C+   L  A  + ++M       D
Sbjct: 572 LCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHAD 631

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            +T+TTL+    K G + +A  L   M  K I P  VTY T+I  +C++ +++    +  
Sbjct: 632 VFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILE 691

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            MI R+       Y  +I   C +G + EA +L  +++    +    +C  +++GY + G
Sbjct: 692 KMILRQKCKTI--YNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIG 749

Query: 360 DASKADEFLSKMVSEGVDPD-----SISYNTLINGFVREENMDKAFALVS 404
               A +   +M +  + PD      +S   ++ G   + NM   F+LVS
Sbjct: 750 VPLLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEGAGNDNNMLLYFSLVS 799



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 142/283 (50%), Gaps = 2/283 (0%)

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D + Y ++L  L + KM   A  +   M  RG++     F  ++  + + G +  AL + 
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            +M +  ++P+++  NT ID F +   +EKA +    M    I PN ++Y  +I GYC +
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE-GVDPDSIS 382
             V EA  L  +M  KG  P  VS  TI+   C+     +  + + KM  E G+  D ++
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVT 388

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNTLI+   + ++ D+A   +   E +G   D + Y+ I+   C++GRM +++ ++  M+
Sbjct: 389 YNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEML 448

Query: 443 EKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            KG   PD  TYT ++NG      + +A +    M   G+ P+
Sbjct: 449 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPN 491


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 229/391 (58%), Gaps = 1/391 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG-VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++ LC+  +++ AK  + EM  KG V P+  TYNTL+NAY      +   +++  M  +
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE 281

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +   V TY+ LI      G  + A+++ +EM +  +  D   Y++++  S R  NM  A
Sbjct: 282 QVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRA 341

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +F EMS+R + P+  ++  LIG   + GQ++ A +   EM+S G+  + V++   ++G
Sbjct: 342 FALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDG 401

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           YCR G + EAL+++  M +KG   DV TYN + NGLC+     EA  + N M+E+GV P+
Sbjct: 402 YCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPN 461

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             TFT  I  +CK+GN+ +A  LF  M +K   P+I+TYNTLID +CK  ++++A+K+ +
Sbjct: 462 VVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKS 521

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +MI++ + P+  +Y  LI+G C +G V EA +L+ EM  KGI   + +  ++I G  + G
Sbjct: 522 EMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEG 581

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGF 390
            A +A +   +M+  G+ PD   + +L+  F
Sbjct: 582 RADEAFKLYDEMMKIGLIPDDRVFTSLVGSF 612



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 253/460 (55%), Gaps = 3/460 (0%)

Query: 1   MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SG 58
           M+  +C D+++ D        +E+KG+  +  +   L+ A  R G ++   +  + M   
Sbjct: 150 MLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVES 209

Query: 59  KGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL-SPDTATYNTLLVESCRKENMS 117
              +  V +   +I+ LC++G  ++AKE++DEM+  G+  P+  TYNTLL     +++  
Sbjct: 210 NKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRK 269

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
             +EI   M +  V   + ++S LI  +S +G ++ A   F EM+   +  D  +Y+ +I
Sbjct: 270 GVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMI 329

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +   R G +  A  + DEM ++  V +  TY  ++ G+C+A  +  A+ L  EM  +GV 
Sbjct: 330 SWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVD 389

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
            +   F T + G+C+ G M++AL L  IM +K I  D+ TYN L +G CK+   ++A  +
Sbjct: 390 LNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCI 449

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
              M+ + + PN +++ + I  YC  G++ EA RL+ +M  KG  P +++ NT+I  YC+
Sbjct: 450 LNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCK 509

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
                +A +  S+M+++G+ PD  +Y++LI+G      +D+A  L ++M  +G+  +V T
Sbjct: 510 KEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVAT 569

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           Y  +++G  ++GR  ++  +   M++ GL PD   +T+L+
Sbjct: 570 YTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 227/385 (58%), Gaps = 6/385 (1%)

Query: 105 TLLVES-CRKENMSEAEEIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALM--YFRE 160
           TL+++  CR+  + +A+E+  EM  +G V P++ +++TL+  +   G+ DR  +    + 
Sbjct: 220 TLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYV--GRKDRKGVDEILKL 277

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM 220
           M+   +V     Y+I+I  Y  +G + EA K+ +EM EK   MDV  Y+++++   R   
Sbjct: 278 MEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGN 337

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           +  A  LF+EM +R + P+ +T+  LI G CK G M  A  L   M  K +  ++V +NT
Sbjct: 338 MKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNT 397

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
            +DG+C+ G+M++A +L A M  + I+ +  +Y IL NG C +    EA  +   MV KG
Sbjct: 398 TMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKG 457

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           +KP +V+    I+ YC+ G+ ++A+     M  +G  P+ I+YNTLI+ + ++E + +A 
Sbjct: 458 VKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAH 517

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            + S+M N+GL+PD+ TY+ ++ G C  GR+ ++  +   M  KG+  + +TYT++I+G 
Sbjct: 518 KIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGL 577

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDD 485
             +    EAF+ +DEM++ G +PDD
Sbjct: 578 SKEGRADEAFKLYDEMMKIGLIPDD 602



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 92/146 (63%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +   CK+  +  A+    +ME+KG  P+ +TYNTLI+AYC++  +++A ++ + M  KGL
Sbjct: 469 IEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGL 528

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P ++TY+SLI+G C  GR D A ++ +EM   G++ + ATY +++    ++    EA +
Sbjct: 529 LPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFK 588

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSR 147
           ++ EM + G+ PD   F++L+G F +
Sbjct: 589 LYDEMMKIGLIPDDRVFTSLVGSFHK 614



 Score = 45.1 bits (105), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 39/77 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  C   ++D A     EM  KG+  +  TY ++I+   +EG  +EAF+L + M   G
Sbjct: 538 LIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIG 597

Query: 61  LKPGVFTYNSLINGLCK 77
           L P    + SL+    K
Sbjct: 598 LIPDDRVFTSLVGSFHK 614


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 258/481 (53%), Gaps = 2/481 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  L K      ++  L  M+++G+Y     ++ ++ +Y R G L +A +++  M   G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +   N+ I+   +  R ++A   L+ M  +G+ P+  TYN ++   C    + EA 
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
           E+  +M  +G  PD VS+ T++G   +  ++       ++M K  GLVPD V Y  +I+ 
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG-VFP 238
             ++    EAL    +  EKG  +D + Y+ I++ LC+   ++EA DL NEML +G   P
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 452

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           D  T+T +++G C+ G ++KA  L  +M     KP+ V+Y  L++G C+ G+  +A ++ 
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
                   SPN I+Y ++++G    G ++EA  +  EMV KG  P  V  N +++  CR 
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G   +A +F+ + +++G   + +++ T+I+GF + + +D A +++  M       DV TY
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
             ++    ++GR+ ++  ++ +M+ KG++P   TY T+I+ +     + +     ++M+ 
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692

Query: 479 R 479
           R
Sbjct: 693 R 693



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 219/413 (53%), Gaps = 2/413 (0%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
             Y S++  L K   C  ++ VL  M + G+      ++ ++V   R   + +A ++   
Sbjct: 208 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 267

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M R GV P+++  +T I +F R  +L++AL +   M+  G+VP+ V Y  +I GYC    
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML-ERGVFPDFYTFT 244
           V EA+++ ++M  KGC+ D V+Y TI+  LC+ K + E  DL  +M  E G+ PD  T+ 
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TLIH   K  + ++AL       +K  + D + Y+ ++   CK G M +A  L  +M+S+
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447

Query: 305 -KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
               P+ ++Y  ++NG+C +G V +A +L   M   G KP  VS   ++ G CR+G + +
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E ++        P+SI+Y+ +++G  RE  + +A  +V +M  +G  P  +  N++L 
Sbjct: 508 AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQ 567

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
             CR GR H++   +   + KG   +   +TT+I+G    + L  A    D+M
Sbjct: 568 SLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 241/462 (52%), Gaps = 4/462 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           ++  A   L  M++ GV P+ +  NT I+ + R   LE+A + +  M   G+ P V TYN
Sbjct: 257 QLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYN 316

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR- 128
            +I G C   R + A E+L++M   G  PD  +Y T++   C+++ + E  ++  +M++ 
Sbjct: 317 CMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            G+ PD V+++TLI + +++   D AL + ++ +  G   D + Y+ I++  C+ G + E
Sbjct: 377 HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSE 436

Query: 189 ALKMRDEMLEKG-CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           A  + +EML KG C  DVVTY  ++NG CR   + +A  L   M   G  P+  ++T L+
Sbjct: 437 AKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALL 496

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +G C+ G   +A  + ++  +    P+ +TY+ ++ G  + G++ +A  +  +M+ +   
Sbjct: 497 NGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF 556

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P  +   +L+   C  G   EA +   E + KG    +V+  T+I G+C++ +   A   
Sbjct: 557 PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSV 616

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           L  M       D  +Y TL++   ++  + +A  L+ KM ++G+ P  +TY  ++  +C+
Sbjct: 617 LDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 676

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            G++ D   IL +MI +     R+ Y  +I        L+EA
Sbjct: 677 MGKVDDLVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEA 716



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 249/505 (49%), Gaps = 53/505 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           M+   C  H+++ A   L +M  KG  PD V+Y T++   C+E  + E   LM  M+ + 
Sbjct: 318 MIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEH 377

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL P   TYN+LI+ L K    D A   L +  + G   D   Y+ ++   C++  MSEA
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEA 437

Query: 120 EEIFCEMSRRG-VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           +++  EM  +G   PD+V+++ ++  F R G++D+A    + M + G  P+ V YT ++N
Sbjct: 438 KDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G CR G  LEA +M +   E     + +TY+ I++GL R   L+EA D+  EM+ +G FP
Sbjct: 498 GMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 557

Query: 239 -----------------------------------DFYTFTTLIHGHCKDGNMNKALNLF 263
                                              +   FTT+IHG C++  ++ AL++ 
Sbjct: 558 GPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVL 617

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           D M   +   D+ TY TL+D   K G + +A +L   M+ + I P  ++Y  +I+ YC M
Sbjct: 618 DDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQM 677

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G V +   +  +M+ +    T+   N +I+  C  G   +AD  L K++      D+ + 
Sbjct: 678 GKVDDLVAILEKMISRQKCRTIY--NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTC 735

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
             L+ G++++     A+ +  +M N+ L+PDV     +      +G++ +++ ++ R++E
Sbjct: 736 YALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVE 795

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKE 468
           +              GH+S  +LK+
Sbjct: 796 R--------------GHISPQSLKQ 806



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 190/384 (49%), Gaps = 2/384 (0%)

Query: 99  DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
           D   Y ++L    + +    +  +   M RRG+     +FS ++  +SR GQL  AL   
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
             M+ AG+ P+ ++    I+ + R   + +AL+  + M   G V +VVTYN ++ G C  
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK-SIKPDIVT 277
             + EA +L  +M  +G  PD  ++ T++   CK+  + +  +L   M ++  + PD VT
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           YNTLI    K    ++A     D   +    + + Y  +++  C  G ++EA  L  EM+
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445

Query: 338 GKG-IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
            KG   P +V+   ++ G+CR G+  KA + L  M + G  P+++SY  L+NG  R    
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
            +A  +++  E     P+ ITY+VI+ G  R+G++ ++  ++  M+ KG  P       L
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565

Query: 457 INGHVSQNNLKEAFRFHDEMLQRG 480
           +          EA +F +E L +G
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKG 589



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 157/325 (48%), Gaps = 2/325 (0%)

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM 220
           MK  G+      ++ ++  Y R G + +ALK+   M   G   +++  NT ++   RA  
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           L +A      M   G+ P+  T+  +I G+C    + +A+ L + M  K   PD V+Y T
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352

Query: 281 LIDGFCKVGEMEKANKLWADMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
           ++   CK   + +   L   M     + P+ ++Y  LI+      H  EA     +   K
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412

Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDK 398
           G +   +  + I+   C+ G  S+A + +++M+S+G   PD ++Y  ++NGF R   +DK
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472

Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           A  L+  M   G  P+ ++Y  +L G CR G+  ++  ++    E   +P+  TY+ +++
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532

Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVP 483
           G   +  L EA     EM+ +GF P
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFP 557



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 143/283 (50%), Gaps = 2/283 (0%)

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D + Y ++L  L + K+   +  +   M  RG++     F+ ++  + + G +  AL + 
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            +M +  ++P+++  NT ID F +   +EKA +    M    I PN ++Y  +I GYC +
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE-GVDPDSIS 382
             V EA  L  +M  KG  P  VS  TI+   C+     +  + + KM  E G+ PD ++
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNTLI+   + ++ D+A   +   + +G   D + Y+ I+   C++GRM +++ ++  M+
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445

Query: 443 EKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            KG   PD  TYT ++NG      + +A +    M   G  P+
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 257/521 (49%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCK +++D A      +E+    P T  YNT+I  Y   G  +EA+ L+     KG
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 61  LKPGVF----------------------------------TYNSLINGLCKKGRCDRAKE 86
             P V                                   TYN LI+ LC+ G+ D A E
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFE 398

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           + D M + GL P+  T N ++   C+ + + EA  +F EM  +   PD ++F +LI    
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + G++D A   + +M  +    ++++YT +I  +  +G   +  K+  +M+ + C  D+ 
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
             NT ++ + +A    +   +F E+  R   PD  +++ LIHG  K G  N+   LF  M
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++    D   YN +IDGFCK G++ KA +L  +M ++   P  ++YG +I+G   +  +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA+ L+ E   K I+  +V  +++I G+ + G   +A   L +++ +G+ P+  ++N+L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-G 445
           ++  V+ E +++A      M+     P+ +TY +++ G C+  R  +   + W+ ++K G
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV-RKFNKAFVFWQEMQKQG 757

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + P   +YTT+I+G     N+ EA    D     G VPD A
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 239/469 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  K+D+A      M++ G++P+  T N +++  C+   L+EA  +   M  K 
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+ SLI+GL K GR D A +V ++ML      ++  Y +L+          +  
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ +M  +  +PD+   +T +    + G+ ++    F E+K+   VPD   Y+I+I+G 
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF  E  ++   M E+GCV+D   YN +++G C+   + +A  L  EM  +G  P  
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I G  K   +++A  LF+    K I+ ++V Y++LIDGF KVG +++A  +  +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + ++PN  ++  L++       + EA   +  M      P  V+   +I G C+   
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M  +G+ P +ISY T+I+G  +  N+ +A AL  + +  G VPD   YN 
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++ G     R  D+  +      +GL     T   L++     + L++A
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 227/483 (46%), Gaps = 36/483 (7%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P    Y TLI A+      +    L   M   G +P V  + +LI G  K+GR D A  +
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225

Query: 88  LDEMLQM-----------------------------------GLSPDTATYNTLLVESCR 112
           LDEM                                      GL PD  TY +++   C+
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285

Query: 113 KENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVL 172
              + EA E+F  + +    P   +++T+I  +   G+ D A       ++ G +P  + 
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA 345

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           Y  I+    + G V EALK+ +EM +K    ++ TYN +++ LCRA  L  A +L + M 
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
           + G+FP+  T   ++   CK   +++A  +F+ M  K   PD +T+ +LIDG  KVG ++
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
            A K++  M+      N I Y  LI  + + G   +  +++ +M+ +   P L   NT +
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
               ++G+  K      ++ +    PD+ SY+ LI+G ++    ++ + L   M+ QG V
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
            D   YN+++ GFC+ G+++ +  +L  M  KG  P   TY ++I+G    + L EA+  
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644

Query: 473 HDE 475
            +E
Sbjct: 645 FEE 647



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 213/453 (47%), Gaps = 1/453 (0%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           +YN+L+    R    +   Q++  MS  G  P V T   ++ G  K  +     +V+  M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
            +    P  + Y TL+       +      +F +M   G  P +  F+TLI  F++ G++
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D AL    EMKS+ L  D VLY + I+ + + G V  A K   E+   G   D VTY ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           +  LC+A  L EA ++F  + +    P  Y + T+I G+   G  ++A +L +    K  
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P ++ YN ++    K+G++++A K++ +M  +  +PN  +Y ILI+  C  G +  AF 
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFE 398

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L   M   G+ P + + N ++   C+S    +A     +M  +   PD I++ +LI+G  
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   +D A+ +  KM +     + I Y  ++  F   GR  D   I   MI +  +PD  
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              T ++        ++     +E+  R FVPD
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 198/445 (44%), Gaps = 35/445 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV+ LCK  K+D A     EM+ K   PD +T+ +LI+   + G +++A+++   M    
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +     Y SLI      GR +   ++  +M+    SPD    NT +    +     +  
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F E+  R   PD  S+S LI    + G  +     F  MK  G V D   Y I+I+G+
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE---------- 230
           C+ G V +A ++ +EM  KG    VVTY ++++GL +   L EA  LF E          
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657

Query: 231 -------------------------MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                    ++++G+ P+ YT+ +L+    K   +N+AL  F  
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +    P+ VTY  LI+G CKV +  KA   W +M  + + P+ ISY  +I+G    G+
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA  L+      G  P     N +I+G      A  A     +    G+   + +   
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVV 837

Query: 386 LINGFVREENMDKAFALVSKMENQG 410
           L++   + + +++A  + + +   G
Sbjct: 838 LLDTLHKNDCLEQAAIVGAVLRETG 862



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 167/347 (48%), Gaps = 6/347 (1%)

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLV---PDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           +IG+  R   ++RA+ YFR  +    +   P++    +++   CRN   L+  ++  EM 
Sbjct: 68  VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD--QILGEMS 125

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G    V T   ++ G  +A  L E  D+   M +    P F  +TTLI       + +
Sbjct: 126 VAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSD 185

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
             L LF  M +   +P +  + TLI GF K G ++ A  L  +M S  +  + + Y + I
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI 245

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           + +  +G V  A++ ++E+   G+KP  V+  ++I   C++    +A E    +      
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P + +YNT+I G+      D+A++L+ +   +G +P VI YN ILT   + G++ D  L 
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV-DEALK 364

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  ++K   P+ STY  LI+       L  AF   D M + G  P+
Sbjct: 365 VFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 64/151 (42%)

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM   G  P++ +C  ++ G  ++    +  + +  M      P   +Y TLI  F    
Sbjct: 123 EMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN 182

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           + D    L  +M+  G  P V  +  ++ GF ++GR+  +  +L  M    L+ D   Y 
Sbjct: 183 HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN 242

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             I+       +  A++F  E+   G  PD+
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 241/468 (51%), Gaps = 3/468 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EME +GV P+  TY+ +I+ Y R G +E A +       +        YN++I+  CK G
Sbjct: 252 EMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAG 311

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR---GVAPDIV 136
             +RA+ ++  M + GL      YN L+        + +   +F  +  R   G++P +V
Sbjct: 312 NMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVV 371

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           S+  LI ++S+ G++D+AL    EM+  G+  +   Y++II+GY + G    A  + ++M
Sbjct: 372 SYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDM 431

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
              G   D +TYN ++N  C+   +  A +L   M      P   T+T +I G  K G++
Sbjct: 432 SNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDL 491

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
             A      M     +P   TYN ++ G  + G+M++A  +  +M+   + PN  SY  L
Sbjct: 492 RMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTL 551

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I GY  +G +  AF+ +  +   G+KP +++  +++K  C++G         ++M + GV
Sbjct: 552 IEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGV 611

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
             ++  YN L++G+ +  +M +A  ++ KM ++GL PD+ +Y   +   C+ G M  +  
Sbjct: 612 PMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATE 671

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            + +M ++G+ P+   YTTLI+G  S +  ++A   +DEM   G +PD
Sbjct: 672 TIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPD 719



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 230/428 (53%), Gaps = 3/428 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEE---AFQLMNSMS 57
           +++A CK   ++ A+  +  ME++G+      YN L++ Y     +++    F+ + + +
Sbjct: 303 IIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKART 362

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
             GL P V +Y  LIN   K G+ D+A ++ +EM   G+  +  TY+ ++    +  + +
Sbjct: 363 ETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTA 422

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A  +F +MS  G+ PD ++++ L+  F +NGQ++RAL     M+S    P    YTIII
Sbjct: 423 NAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIII 482

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           +G+ + G +  A +   +M   G      TYN I++GL +A  +  A  + +EM+  GV 
Sbjct: 483 DGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVH 542

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           P+  ++TTLI G+   G+M  A   F+ + +  +KPD++ Y +L+   CK G M+    +
Sbjct: 543 PNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAI 602

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
            A+M +  +  N   Y IL++G+   G + EA  +  +M  +G+ P + S  + I   C+
Sbjct: 603 TAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCK 662

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
           +GD  KA E + +M  +GV P+  +Y TLI+G+      +KA     +M++ G++PD   
Sbjct: 663 AGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPL 722

Query: 418 YNVILTGF 425
           Y+ I+T  
Sbjct: 723 YHCIMTSL 730



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 218/461 (47%), Gaps = 38/461 (8%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP    +  L+N   K+G    A+   + M   G+ P+  +Y  L+      +++  A  
Sbjct: 189 KPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIA 248

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
              EM   GV+P+  ++S +I  + R G ++ A  +F+   S     ++V+Y  II+ YC
Sbjct: 249 CVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYC 308

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL--CRA-----------KMLTE----- 223
           + G +  A  +   M E+G    +  YN +++G   CRA           K  TE     
Sbjct: 309 KAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSP 368

Query: 224 --------------------ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
                               A  + NEM ++G+  +  T++ +I G+ + G+   A ++F
Sbjct: 369 TVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVF 428

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
           + M+   IKPD +TYN L++ FCK G+M +A +L A M S    P   +Y I+I+G+  +
Sbjct: 429 EDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKI 488

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G +  AF    +M   G +P+  + N I+ G  ++G   +A   + +MV  GV P+  SY
Sbjct: 489 GDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSY 548

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            TLI G+    +M  AF   ++++  GL PDVI Y  +L   C+ GRM  +  I   M  
Sbjct: 549 TTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAA 608

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G+  +   Y  L++G   + ++ EA     +M   G  PD
Sbjct: 609 AGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPD 649



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 192/401 (47%), Gaps = 6/401 (1%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           + G+ P  V+Y  LIN Y + G +++A Q+ N M  +G+K    TY+ +I+G  + G   
Sbjct: 363 ETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTA 422

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
            A  V ++M   G+ PD  TYN L+   C+   M+ A E+   M      P + +++ +I
Sbjct: 423 NAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIII 482

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
             F + G L  A    R+MK AG  P    Y +I++G  + G +  A  + DEM+  G  
Sbjct: 483 DGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVH 542

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            +  +Y T++ G      +  A   FN + E G+ PD   + +L+   CK G M   L +
Sbjct: 543 PNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAI 602

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
              M    +  +   YN L+DG+ + G+M +A+ +   M    ++P+  SY   IN  C 
Sbjct: 603 TAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCK 662

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G + +A     +M  +G++P L +  T+I G+  +    KA     +M S G+ PD   
Sbjct: 663 AGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPL 722

Query: 383 YNTLINGFV------REENMDKAFALVSKMENQGLVPDVIT 417
           Y+ ++   +      RE   D    + S+M +QG+  D  T
Sbjct: 723 YHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQGICVDFAT 763



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 192/395 (48%), Gaps = 38/395 (9%)

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           +R   P     + L+  + + G    A   F  M++AG+ P+   YT +I+ Y     + 
Sbjct: 185 KRIKKPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLR 244

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A+   +EM  +G   +  TY+ I++G  R   +  A+  F   L      +   +  +I
Sbjct: 245 GAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNII 304

Query: 248 HGHCKDGNMNKA---------------LNLFDIM-----------------------TQK 269
           H +CK GNM +A               L L++++                       T+ 
Sbjct: 305 HAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTET 364

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
            + P +V+Y  LI+ + K+G+M+KA ++  +M  + I  N  +Y ++I+GY  +G    A
Sbjct: 365 GLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANA 424

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
           F ++ +M   GIKP  ++ N ++  +C++G  ++A E L++M S    P   +Y  +I+G
Sbjct: 425 FSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDG 484

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
           F++  ++  AF  V  M+  G  P   TYNVI+ G  + G+M  +  I+  M+  G++P+
Sbjct: 485 FMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPN 544

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +YTTLI G+    ++  AF++ + + + G  PD
Sbjct: 545 ERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPD 579



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 133/270 (49%), Gaps = 10/270 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +  ++D A   + EM   GV+P+  +Y TLI  Y   G +  AF+  N +   G
Sbjct: 516 IMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVG 575

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           LKP V  Y SL+   CK GR      +  EM   G+  +   YN LL    ++ +M EA 
Sbjct: 576 LKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEAS 635

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  +M   G+ PDI S+++ I    + G + +A     +MK  G+ P+   YT +I+G+
Sbjct: 636 DIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGW 695

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG-LCRAKMLTEA--DDLF---NEMLER 234
               +  +AL   DEM   G + D   Y+ I+   L RA +  E   D +    +EM+++
Sbjct: 696 ASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQ 755

Query: 235 GVFPDFYTFTT----LIHGHCKDGNMNKAL 260
           G+  DF T       LI    + G++ +A+
Sbjct: 756 GICVDFATAKHWQRFLIKAERQSGDLTRAV 785



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 44/280 (15%)

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           F  L+  H KD    K ++ F    ++  KP    +  L++ + K G+   A   +  M 
Sbjct: 166 FRNLVEDHPKDAR--KVVDAF----KRIKKPKQRDHTLLVNYYGKRGDKHSARAAFESMR 219

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
           +  I PN  SY  LI+ Y     +  A     EM  +G+ P   + + II GY R GD  
Sbjct: 220 AAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVE 279

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ------------- 409
            A+ +  + +SE    + + YN +I+ + +  NM++A A+++ ME Q             
Sbjct: 280 AAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLM 339

Query: 410 -------------------------GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
                                    GL P V++Y  ++  + + G+M  +  I   M ++
Sbjct: 340 DGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQ 399

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G+  +R TY+ +I+G+V   +   AF   ++M   G  PD
Sbjct: 400 GIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPD 439


>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 793

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 242/467 (51%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           D A   L EME  G  P  VTYN+LI++Y ++G L+EA +L   M  KG++P V TY +L
Sbjct: 301 DEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTL 360

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
           I+GL + G+ D A    DEML+ G  P+  TYN L+     +    E   +F ++   G 
Sbjct: 361 ISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGF 420

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
            PD+V+++TL+ +F +NG        F+EMK +G VP+   Y  +I+ Y R G   ++++
Sbjct: 421 VPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSME 480

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +   M+E G   D+ TYN +L+ L R     +A+ LF EM      PD  ++++L+H + 
Sbjct: 481 IYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYA 540

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
               ++K   L + +  + I+       TL+    KV  + +  K + ++  R+ S +  
Sbjct: 541 NAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDIN 600

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
               +++ Y     V +   +   M G  I  +  + N+++  Y R GD  K +  L+++
Sbjct: 601 VLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEI 660

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            S G  PD  SYNT+I  + R+  M +A  L S+M++ GL+PD++TYN+ +  +      
Sbjct: 661 KSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMF 720

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            ++  ++  M+ +G  P+  TY +++  +     + +A  F   + Q
Sbjct: 721 EEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQ 767



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 248/501 (49%), Gaps = 37/501 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFL-EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           M+  G+  D  TYNTLI+  CR G L +EA ++ + M   G +P   T+NSL++   K  
Sbjct: 240 MKNDGIPLDRYTYNTLISC-CRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKAR 298

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D A  VL EM   G  P   TYN+L+    +   + EA E+  EM  +G+ PD+++++
Sbjct: 299 MHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYT 358

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TLI    R G++D A+  + EM   G  P+   Y  +I  +   G   E + + D++   
Sbjct: 359 TLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSA 418

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G V DVVT+NT+L    +  + +E   +F EM + G  P+  T+ +LI  + + G  +++
Sbjct: 419 GFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQS 478

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + ++  M +  I PDI TYN ++    + G  E+A KL+A+M +    P+ +SY  L++ 
Sbjct: 479 MEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHA 538

Query: 320 YCSMGHVTEAFRLWYEMVGK------GIKPTLVSCNT----------------------- 350
           Y +   + +   L  ++  +      G+  TLV  N+                       
Sbjct: 539 YANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLD 598

Query: 351 ------IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
                 ++  Y ++    K +E LS M    ++  + +YN+L++ + R  + +K   +++
Sbjct: 599 INVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILT 658

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++++ G  PD  +YN ++  + R+G+M ++  +   M   GL PD  TY   +  +V+ +
Sbjct: 659 EIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANS 718

Query: 465 NLKEAFRFHDEMLQRGFVPDD 485
             +EA      M+ RG  P++
Sbjct: 719 MFEEAIDLVRYMVTRGCKPNE 739



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 213/438 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++++  KD  +  A     EME KG+ PD +TY TLI+   R G ++ A    + M   G
Sbjct: 325 LISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNG 384

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + TYN+LI     +G+      V D++   G  PD  T+NTLL    +    SE  
Sbjct: 385 CKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVS 444

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM + G  P+  ++ +LI  +SR G  D+++  ++ M  AG+ PD   Y  +++  
Sbjct: 445 GVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSAL 504

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A K+  EM    C  D ++Y+++L+    AK L +   L  ++    +    
Sbjct: 505 ARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHH 564

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
               TL+  + K  N+++    F  + ++    DI   N ++  + K   ++K  ++ + 
Sbjct: 565 GLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSL 624

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    I+ +  +Y  L++ Y  +G   +   +  E+   G +P   S NT+I  Y R G 
Sbjct: 625 MKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQ 684

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A    S+M S G+ PD ++YN  +  +V     ++A  LV  M  +G  P+  TYN 
Sbjct: 685 MKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNS 744

Query: 421 ILTGFCRQGRMHDSELIL 438
           IL  +CR G++ D++  L
Sbjct: 745 ILQEYCRHGKIADAKSFL 762



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 204/400 (51%), Gaps = 9/400 (2%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG-RCDRAKE 86
           PD   Y  L++A+ R     +A  +   M   G++P + TYN +++   K          
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENM-SEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
           ++D M   G+  D  TYNTL +  CR+  +  EA ++F EM   G  PD V+F++L+ ++
Sbjct: 236 LVDSMKNDGIPLDRYTYNTL-ISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY 294

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            +    D A+   +EM+  G  P  V Y  +I+ Y ++G + EA ++++EM  KG   DV
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TY T+++GL RA  +  A   ++EML  G  P+  T+  LI  H   G   + + +FD 
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDD 414

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           +      PD+VT+NTL+  F + G   + + ++ +M      P   +Y  LI+ Y   G 
Sbjct: 415 LRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 474

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             ++  ++  M+  GI P + + N ++    R G   +A++  ++M +    PD +SY++
Sbjct: 475 FDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSS 534

Query: 386 LINGFVREENMDKAFAL-----VSKME-NQGLVPDVITYN 419
           L++ +   + +DK  AL       K+E + GLV  ++  N
Sbjct: 535 LLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVN 574



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 174/354 (49%), Gaps = 1/354 (0%)

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL-EALK 191
           PD  +++ L+  FSR  +   A+  FR M + G+ P  V Y ++++ Y +      + + 
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           + D M   G  +D  TYNT+++   R  +  EA  +F+EM   G  PD  TF +L+  + 
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           K    ++A+ +   M      P +VTYN+LI  + K G +++A +L  +M  + I P+ I
Sbjct: 296 KARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVI 355

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           +Y  LI+G    G +  A   + EM+  G KP L + N +IK +   G   +       +
Sbjct: 356 TYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDL 415

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
            S G  PD +++NTL+  F +     +   +  +M+  G VP+  TY  +++ + R G  
Sbjct: 416 RSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLF 475

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             S  I  RMIE G+ PD STY  +++        ++A +   EM      PD+
Sbjct: 476 DQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDE 529



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+ A  +  ++  A     EM+  G+ PD VTYN  + +Y      EEA  L+  M  +G
Sbjct: 675 MIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRG 734

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            KP   TYNS++   C+ G+   AK  L  + Q+
Sbjct: 735 CKPNERTYNSILQEYCRHGKIADAKSFLSNLPQL 768



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG-RMHDSE 435
           +PD+ +Y  L++ F R      A A+  +M   G+ P ++TYNV+L  + +      D  
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVV 234

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++  M   G+  DR TY TLI+        KEA +  DEM   GF PD
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPD 283


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 248/459 (54%), Gaps = 1/459 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           + N+ C  H+ID A   L    + G+  + VT+NTL+     E  + +A  L   +  + 
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 61  L-KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           + +P    Y +++NGL K+G  ++   +L  M Q    PD  TY+ ++   C+  N+  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             +  EM ++ + P+I ++++LI    + GQ ++      EM +  + P+   ++I+I+G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G V +A ++   M+EKG   D++TY+ I++G C    +  A  +FN + ++G+ P+
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            ++++ LI+G+CK  N+ KA+ LF  ++QK +KPD VTY+T++ G  +VG +  A K++ 
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M+    +P+   +  L+ GY   G V EA  L+ ++        +     +I G C++ 
Sbjct: 403 EMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKND 462

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A     K+ S G+ PD  +YN +I GF RE   D+   ++ KME+ G   + ITYN
Sbjct: 463 RVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYN 522

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           VI+ GF R  ++ +    +  M  +G + D +T   LIN
Sbjct: 523 VIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 249/507 (49%), Gaps = 36/507 (7%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A      M +    P  + ++ L               L   M   G+       N 
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           + N  C + R D A  VL   L+ G+  +  T+NTLL     +  +++A  +F ++ R  
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 131 VA-PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           +  P+ V + T++   S+ G  ++ L   R M+     PD   Y+I+I+  C++  +  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           + + +EM +K    ++ TYN++++GLC+     +   L +EM+   + P+ +TF+ LI G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
            CK+G +  A  +   M +K ++PDI+TY+ ++DG+C  G++++A +++  +  + I PN
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
             SY ILINGYC   ++ +A +L+ E+  KG+KP  V+ +TI+ G    G    A +   
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402

Query: 370 KMVSEGVDPD----------------------------------SIS-YNTLINGFVREE 394
           +M+  G  PD                                  +IS Y  +ING  + +
Sbjct: 403 EMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKND 462

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            + +A A+  K+ + GL+PDV TYNV++TGFCR+G   + + IL +M + G   +  TY 
Sbjct: 463 RVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYN 522

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGF 481
            ++ G    N + E   F  EM  RGF
Sbjct: 523 VIMQGFFRSNKISEIVSFMKEMAGRGF 549



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 127/395 (32%), Positives = 222/395 (56%), Gaps = 2/395 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K    +     L  MEQ    PD  TY+ +I+A C++  L+ A  L+N M  K 
Sbjct: 174 VMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKN 233

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P +FTYNSLI+GLCK G+ ++ K +L EM+ + ++P+  T++ L+   C++  + +A+
Sbjct: 234 IPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDAD 293

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M  +GV PDI+++S ++  +   GQ+DRA   F  ++  G+ P+   Y+I+INGY
Sbjct: 294 EVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGY 353

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+   + +A+++  E+ +KG   D VTY+TIL+GL     + +A  +F+EML  G  PD 
Sbjct: 354 CKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDI 413

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
              +TL+ G+ K G + +A+ LF  + +     +I  Y  +I+G CK   + +A+ ++  
Sbjct: 414 CLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEK 473

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           + S  + P+  +Y ++I G+C  G   E   +  +M   G     ++ N I++G+ RS  
Sbjct: 474 LPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNK 533

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
            S+   F+ +M   G   D+ +   LIN  V +EN
Sbjct: 534 ISEIVSFMKEMAGRGFSFDATTTGVLIN--VLKEN 566



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 229/440 (52%), Gaps = 1/440 (0%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           L++A  L + M      P V  ++ L   +           +  EM  +G+    +  N 
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG-IFSRNGQLDRALMYFREMKSA 164
           +    C +  +  A  +     + G+  ++V+F+TL+G +F+ N   D  +++ + ++  
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
              P+ V+Y  ++NG  + G   + L +   M +     DV TY+ +++ LC+   L  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
            +L NEM ++ + P+ +T+ +LI G CK G   K   L   M   +I P++ T++ LIDG
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
            CK G++E A+++   MI + + P+ I+Y  +++GYC  G V  A R++  +  KGIKP 
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           + S + +I GYC+  + +KA +   ++  +G+ PD+++Y+T+++G +    +  A  +  
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M   G  PD+  ++ +L G+ + G + ++ L+  ++     + + S YT +ING    +
Sbjct: 403 EMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKND 462

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
            ++EA    +++   G +PD
Sbjct: 463 RVREAHAIFEKLPSIGLIPD 482



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 35/225 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINA--------------------- 39
           ++N  CK   +  A     E+ QKG+ PDTVTY+T+++                      
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408

Query: 40  --------------YCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
                         Y + G +EEA  L + +        +  Y  +INGLCK  R   A 
Sbjct: 409 PTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAH 468

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            + +++  +GL PD  TYN ++   CR+    E + I  +M   G   + ++++ ++  F
Sbjct: 469 AIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGF 528

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
            R+ ++   + + +EM   G   D     ++IN    N  +++ +
Sbjct: 529 FRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 3/200 (1%)

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           +V  ++ A  L+  M+  K  P+ I +  L     +M H +    L+ EM   GI  +  
Sbjct: 39  EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
             N +   YC       A   L   +  G+  + +++NTL+ G   E  +  A  L  K+
Sbjct: 99  ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL 158

Query: 407 ENQGLV-PDVITYNVILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQN 464
             + +  P+ + Y  ++ G  ++G    + L L R++E+G   PD  TY+ +I+      
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKT-LSLLRIMEQGNTKPDVRTYSIVIDALCKDI 217

Query: 465 NLKEAFRFHDEMLQRGFVPD 484
           NL  A    +EM Q+   P+
Sbjct: 218 NLDAAINLLNEMKQKNIPPN 237


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/509 (29%), Positives = 251/509 (49%), Gaps = 38/509 (7%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           C+ H + S   F  +M    V P+  ++N LI+  C +G L++A  ++  M   G  P +
Sbjct: 154 CRAHLVWS---FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTI 210

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            +YN+L++  CKKGR   A  ++  M   G+  D  TYN  +   CR    ++   +  +
Sbjct: 211 VSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKK 270

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M  + + P+ VS++TLI  F + G++  A   F EM    L P+ + Y I+INGYC NG 
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGN 330

Query: 186 VLEALKMRDEM-------------------------------LEKGCV----MDVVTYNT 210
             EAL++ D M                               LE+ C+    ++ +++  
Sbjct: 331 FEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTV 390

Query: 211 ILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
           +++GLCR  +L EA  L  EM + GV PD  TF+ LI+G CK GN+NKA  +   + ++ 
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG 450

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAF 330
             P+ V ++TLI   CKVG + +A K +A M     + +  +   L+   C  G + EA 
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAE 510

Query: 331 RLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGF 390
              + +   G+ P  V+ + II GY   GD S A     +M+S G  P   +Y +L+   
Sbjct: 511 EFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVL 570

Query: 391 VREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDR 450
            + +N  +A  L+ K+    L  D I+YN ++    + G + ++  +   MI+  + PD 
Sbjct: 571 CKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDS 630

Query: 451 STYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            TYT +++G + +  L  AF F   ++Q+
Sbjct: 631 YTYTCILSGLIREGRLVCAFIFLGRLMQK 659



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 236/462 (51%), Gaps = 4/462 (0%)

Query: 27  YP----DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           YP    +   ++ LI  Y R+G +  A    +SM  +G KP V+T N ++  + K  R  
Sbjct: 98  YPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAH 157

Query: 83  RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
                  +ML   + P+ +++N L+   C +  + +A  I   M R G  P IVS++TL+
Sbjct: 158 LVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLL 217

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               + G+   AL+    M+  G+  D   Y + I+  CRN    +   +  +M  K   
Sbjct: 218 SWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMIT 277

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
            + V+YNT++NG  +   +  A  +FNEM+E  + P+  T+  LI+G+C +GN  +AL +
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRV 337

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
            D+M    ++P+ VT  TL++G  K  + + A  +       + S N IS+ ++I+G C 
Sbjct: 338 LDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCR 397

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G + EAF+L  EM   G+ P +++ + +I G+C+ G+ +KA E +SK+  EG  P+++ 
Sbjct: 398 NGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVI 457

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           ++TLI    +  N+ +A    + M   G   D  T N ++   C  G++ ++E  L  + 
Sbjct: 458 FSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHIS 517

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             GL P+  T+  +ING+ +  +   AF   D M+  G  P 
Sbjct: 518 RIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPS 559



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 244/485 (50%), Gaps = 1/485 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N   K+ KI  A     EM +  + P+ +TYN LIN YC  G  EEA ++++ M    
Sbjct: 286 LINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEAND 345

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P   T  +L+NGL K  + D A+ +L+       S +  ++  ++   CR   + EA 
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAF 405

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM + GV PDI++FS LI  F + G +++A     ++   G VP+NV+++ +I   
Sbjct: 406 QLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V EA+K    M   G   D  T N+++  LC    L EA++  + +   G+ P+ 
Sbjct: 466 CKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  +I+G+   G+ + A ++FD M      P   TY +L+   CK     +A KL   
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +    ++ + ISY  LI      G++ EA RL+ EM+   I P   +   I+ G  R G 
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645

Query: 361 ASKADEFLSK-MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              A  FL + M  E +  +SI Y   I+G  +      A  L  +ME +GL  D+I  N
Sbjct: 646 LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALN 705

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            I  G+ R G++  +  ++ +   K + P+ +T+  L++G+    ++   F+ ++ M + 
Sbjct: 706 SITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRS 765

Query: 480 GFVPD 484
           GF P+
Sbjct: 766 GFFPN 770



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/557 (24%), Positives = 251/557 (45%), Gaps = 71/557 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N L K  K D A+  L          + +++  +I+  CR G L+EAFQL+  M   G
Sbjct: 356 LLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDG 415

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P + T++ LING CK G  ++AKEV+ ++ + G  P+   ++TL+  SC+  N+ EA 
Sbjct: 416 VHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAM 475

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + +  M+  G   D  + ++L+     NG+L  A  +   +   GLVP++V +  IINGY
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGY 535

Query: 181 CRNGFVLEALKMRDEMLEKG--------------------------------CV---MDV 205
              G    A  + D M+  G                                C+   +D 
Sbjct: 536 ANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM--------- 256
           ++YNT++  + ++  L EA  LF EM++  + PD YT+T ++ G  ++G +         
Sbjct: 596 ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGR 655

Query: 257 ---------------------------NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
                                        AL LF  M +K +  D++  N++ DG+ ++G
Sbjct: 656 LMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMG 715

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           ++  A+ L +   ++ + PN  ++ IL++GY     +   F+L+  M   G  P  ++ +
Sbjct: 716 KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYH 775

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           ++I G C  G      + L   ++E    D +++N LI       ++DK   L   ME  
Sbjct: 776 SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            +  D  T   +     R+    +  + +  M++KG  P    Y T++       +++ A
Sbjct: 836 RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 470 FRFHDEMLQRGFVPDDA 486
           F+  D+M+  G   DDA
Sbjct: 896 FKLKDQMVALGISLDDA 912



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 253/520 (48%), Gaps = 36/520 (6%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +V +LC++ K+  A+ FL  + + G+ P++VT++ +IN Y   G    AF + + M   G
Sbjct: 496  LVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCG 555

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P  FTY SL+  LCK      A+++L ++  + L+ DT +YNTL+VE  +  N+ EA 
Sbjct: 556  HHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAV 615

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF-REMKSAGLVPDNVLYTIIING 179
             +F EM +  + PD  +++ ++    R G+L  A ++  R M+   L  ++++YT  I+G
Sbjct: 616  RLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
              + G    AL +  EM EKG  +D++  N+I +G  R   +  A  L ++   + V P+
Sbjct: 676  LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPN 735

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              TF  L+HG+ +  ++     L+++M +    P+ +TY++LI G C  G +E   K+  
Sbjct: 736  LTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795

Query: 300  DMISRKISPNYISYGILINGYCSMG---------HVTEAFRL------------------ 332
              I+   + + +++ +LI   C +          H  E FR+                  
Sbjct: 796  MFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 333  --------WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
                     +EM+ KG  PT     T++K  CR GD   A +   +MV+ G+  D  +  
Sbjct: 856  VSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAEC 915

Query: 385  TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             ++ G      +++A  ++ +M     +P   T+  ++  FC++    ++  +   M   
Sbjct: 916  AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975

Query: 445  GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             +  D   Y  LI+   +  ++  A  F++E+ Q+G +P+
Sbjct: 976  RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPN 1015



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 226/500 (45%), Gaps = 36/500 (7%)

Query: 6   CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
           CK   +  A  F   M   G   D  T N+L+ + C  G L EA + ++ +S  GL P  
Sbjct: 466 CKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
            T++ +ING    G    A  V D M+  G  P   TY +LL   C+ +N  EA ++  +
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           +    +A D +S++TLI   S++G L  A+  F EM    ++PD+  YT I++G  R G 
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645

Query: 186 VLEALKMRDEMLEKGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
           ++ A      +++K  + ++ + Y   ++GL +A     A  LF EM E+G+  D     
Sbjct: 646 LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALN 705

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           ++  G+ + G +  A +L      K++ P++ T+N L+ G+ +  ++    KL+  M   
Sbjct: 706 SITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRS 765

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
              PN ++Y  LI G C+ G +    ++    + +      ++ N +I+  C   D  K 
Sbjct: 766 GFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKV 825

Query: 365 DE-----------------------------------FLSKMVSEGVDPDSISYNTLING 389
            +                                   F+ +M+ +G  P S  Y T++  
Sbjct: 826 IDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKR 885

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             R  ++  AF L  +M   G+  D      ++ G    G++ ++  IL RM+     P 
Sbjct: 886 MCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPT 945

Query: 450 RSTYTTLINGHVSQNNLKEA 469
            ST+TTL++    ++N KEA
Sbjct: 946 TSTFTTLMHVFCKKDNFKEA 965



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 168/349 (48%)

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           F  LI ++ R G +  A+  F  M   G  P      +I+    +N           +ML
Sbjct: 108 FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQML 167

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
                 +V ++N +++ LC    L +A ++   M   G  P   ++ TL+   CK G   
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            AL L   M  K I+ D+ TYN  ID  C+     +   +   M ++ I+PN +SY  LI
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           NG+   G +  A R++ EM+   + P L++ N +I GYC +G+  +A   L  M +  V 
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVR 347

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P+ ++  TL+NG  +    D A  ++ +        + I++ V++ G CR G + ++  +
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQL 407

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L  M + G++PD  T++ LING     N+ +A     ++ + GFVP++ 
Sbjct: 408 LIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNV 456



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 147/320 (45%)

Query: 10   KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
            K+ SA   + +   K V P+  T+N L++ Y R   +   F+L N M   G  P   TY+
Sbjct: 716  KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYH 775

Query: 70   SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            SLI GLC  G  +   ++L   +    + D  T+N L+ + C   ++ +  ++   M   
Sbjct: 776  SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 130  GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
             V+ D  +   +  +  R        ++  EM   G +P +  Y  ++   CR G +  A
Sbjct: 836  RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 190  LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
             K++D+M+  G  +D      ++ GL     + EA  +   ML     P   TFTTL+H 
Sbjct: 896  FKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHV 955

Query: 250  HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
             CK  N  +A NL  +M    +K DIV YN LI   C  G++  A   + ++  + + PN
Sbjct: 956  FCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPN 1015

Query: 310  YISYGILINGYCSMGHVTEA 329
              +Y +L++   +  +V+  
Sbjct: 1016 MTTYRVLVSAISTKHYVSRG 1035



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 97/187 (51%)

Query: 16   MFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGL 75
            +F+ EM +KG  P +  Y T++   CR G ++ AF+L + M   G+        +++ GL
Sbjct: 862  VFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGL 921

Query: 76   CKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
               G+ + A  +L  ML+M   P T+T+ TL+   C+K+N  EA  +   M    V  DI
Sbjct: 922  ALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDI 981

Query: 136  VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
            V+++ LI     NG +  AL ++ E+K  GL+P+   Y ++++      +V     +  +
Sbjct: 982  VAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKD 1041

Query: 196  MLEKGCV 202
            + ++G V
Sbjct: 1042 LNDRGLV 1048



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            MV  L    KI+ A   L  M +    P T T+ TL++ +C++   +EA  L   M    
Sbjct: 917  MVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYR 976

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +K  +  YN LI+  C  G    A +  +E+ Q GL P+  TY  L+     K  +S  E
Sbjct: 977  VKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGE 1036

Query: 121  EIFCEMSRRGVA 132
             +  +++ RG+ 
Sbjct: 1037 IVLKDLNDRGLV 1048


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 246/474 (51%), Gaps = 4/474 (0%)

Query: 12  DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
           ++ + F    +Q+G   +T  Y T+I+   R     E   L+  M  +G +      +S 
Sbjct: 198 NALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSF 257

Query: 72  INGLCKKGRCDRAKEVLDEMLQMGLSP---DTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           +    + GR   + E  + M +MG  P   DTA YN++LV   + + +  AE +F +M  
Sbjct: 258 VMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTA-YNSVLVSLVKNKKLDMAENLFAQMIN 316

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
            GV+ + ++++++I  F    +++ A+    +M      PD V YTI+I+  C+   + +
Sbjct: 317 NGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQ 376

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A  +  +M E GC  ++ TYN ++ GLC  +   EA +L   M + GV P+ YT+T L H
Sbjct: 377 AYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTH 436

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G CK   +++A  +F+    + +KP+ VTYNTL++G+C+   + +A  +  +M     +P
Sbjct: 437 GLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTP 496

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           ++++Y  LI G      + +A R+  EM  KG      + N + +G  R G+   A  F 
Sbjct: 497 DHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFY 556

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
            +M   G    +  Y   I+       M++A AL+ +M N+G  P++ TYN ++ GFCRQ
Sbjct: 557 RRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQ 616

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           GR+ D++ +L  MIE G+ PD  +Y  LI    +Q   ++A + +   L+RG V
Sbjct: 617 GRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVV 670



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 234/452 (51%), Gaps = 4/452 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L +       +  L +M+ +G        ++ + +Y R G  +E+ +  N M   G
Sbjct: 222 MIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMG 281

Query: 61  LKPGVF--TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
            +PG+    YNS++  L K  + D A+ +  +M+  G+S +  TY +++     KE M +
Sbjct: 282 YEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMED 341

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A ++  +M +   APD+V+++ +I    +   +++A    ++M+  G  P+   Y  +I 
Sbjct: 342 AMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQ 401

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           G C      EAL++   M + G   ++ TY  + +GLC+ + L  A ++FNE L RG+ P
Sbjct: 402 GLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKP 461

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  T+ TL++G+C+   + +A+++   M Q    PD VTY TLI G  +  ++  A ++ 
Sbjct: 462 NRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMH 521

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M ++    N+ +  IL  G   +G+  +A   +  M  +G   +       I     +
Sbjct: 522 DEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTA 581

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  +A   L +M+++G  P+  +YNT+I GF R+  +D A A+++ M   G+ PD  +Y
Sbjct: 582 GEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSY 641

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKG--LNP 448
           N+++  F  QGR  D++ +    +E+G  LNP
Sbjct: 642 NILIKEFHNQGRTQDADQLYATALERGVVLNP 673



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 185/364 (50%), Gaps = 4/364 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+       K++ A   L +M Q    PD VTY  +I+A C+   +E+A+ ++  M   G
Sbjct: 329 MIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENG 388

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P ++TYN+LI GLC   R + A E++  M Q G+ P+  TY  L    C+   +  A+
Sbjct: 389 CEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAK 448

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F E   RG+ P+ V+++TL+  + R  +L  A+   +EM      PD+V YT +I G 
Sbjct: 449 EMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGL 508

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            +   + +AL+M DEM  KG  ++  T N +  GL R     +A   +  M +RG     
Sbjct: 509 VQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSA 568

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +   IH     G M +A  L   M  K   P++ TYNT+I GFC+ G ++ A+ +   
Sbjct: 569 SDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNF 628

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI----KPTLVSCNTIIKGYC 356
           MI   I P+  SY ILI  + + G   +A +L+   + +G+    KP +   + + +G  
Sbjct: 629 MIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPKPVIQEPDELPEGLV 688

Query: 357 RSGD 360
           RS +
Sbjct: 689 RSQE 692


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 241/470 (51%), Gaps = 1/470 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV    +  K+  A   + +M  +G+   T   N +I        +E A  + + MS +G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P   TY  +I G C+ G    A   + EM++ G   D AT   ++   C K  ++ A 
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
             F ++++ G++P+++++S++I    + G + +A     EM   G  P+   +T +I+G 
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 359

Query: 181 CRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           C+ G+   A ++  +++       +V TY  +++G C+ + L+ A+ LF  M E+G+ P+
Sbjct: 360 CKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPN 419

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+TTLI GHCK GN +KA  L ++M+ +   P+  TYN+++DG CK G  E+A KL  
Sbjct: 420 TNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 479

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                +I  + ++Y ILI+  C    + +A     +M   G +P +    T+I  +CR  
Sbjct: 480 TGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQN 539

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
               +++   +++  G+ P   +Y ++I G+ RE+ +  A     KM + G  PD I+Y 
Sbjct: 540 MMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYG 599

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            +++G C++ R+ ++  +   MI+KGL+P   T  TL   +    +   A
Sbjct: 600 ALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASA 649



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 234/449 (52%), Gaps = 1/449 (0%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           ++  +   G L+EA  ++  M  +GL       N +I    +    + A  V DEM   G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           + PD+ TY  ++V  CR  N+ EA+   CEM  RG   D  + + +I  F     ++RA+
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
            +F ++   GL P+ + Y+ +I+G C+ G V +A ++ +EM++ G   +V T+ ++++GL
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 359

Query: 216 CRAKMLTEADDLFNEMLERGVF-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           C+      A  LF +++    + P+ +T+T +I G+CK+  +++A  LF+ M ++ + P+
Sbjct: 360 CKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPN 419

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
             TY TLIDG CK G   KA +L   M +    PN  +Y  +++G C  G   EAF+L  
Sbjct: 420 TNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 479

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
                 I+   V+   +I   C+  D ++A  FL+KM   G  PD   Y TLI  F R+ 
Sbjct: 480 TGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQN 539

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            M  +  L  ++   GL P   TY  ++ G+CR+ ++  +     +M + G  PD  +Y 
Sbjct: 540 MMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYG 599

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            LI+G   ++ L EA + +D M+ +G  P
Sbjct: 600 ALISGLCKESRLDEARQLYDTMIDKGLSP 628



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 218/408 (53%), Gaps = 1/408 (0%)

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           G+   A +++ +M   GL   T   N +++ +     +  A  +F EMS RGV PD  ++
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
             +I  + RNG +  A  +  EM   G V DN   T+II  +C    V  A+    ++ +
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            G   +++ Y+++++GLC+   + +A +L  EM++ G  P+ YT T+LIHG CK G   +
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 367

Query: 259 ALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
           A  LF  ++   + KP++ TY  +I G+CK  ++ +A  L+  M  + + PN  +Y  LI
Sbjct: 368 AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 427

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           +G+C  G+ ++A+ L   M  +G  P   + N+I+ G C+ G A +A + L+      ++
Sbjct: 428 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 487

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
            D ++Y  LI+   +  +M++A   ++KM   G  PD+  Y  ++  FCRQ  M DSE +
Sbjct: 488 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKL 547

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
              +I+ GL P + TYT++I G+  +  +  A +F  +M   G  PD 
Sbjct: 548 FDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDS 595



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 222/426 (52%), Gaps = 1/426 (0%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM  +GVYPD+ TY  +I  YCR G + EA + +  M  +G      T   +I   C+K 
Sbjct: 234 EMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKS 293

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             +RA     ++ +MGLSP+   Y++++   C++ ++ +A E+  EM + G  P++ + +
Sbjct: 294 LVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHT 353

Query: 140 TLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           +LI    + G  +RA  ++ + ++S    P+   YT +I+GYC+   +  A  + + M E
Sbjct: 354 SLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKE 413

Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
           +G V +  TY T+++G C+A   ++A +L   M   G FP+  T+ +++ G CK G   +
Sbjct: 414 QGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEE 473

Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
           A  L +   Q  I+ D VTY  LI   CK  +M +A      M      P+   Y  LI 
Sbjct: 474 AFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIA 533

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
            +C    + ++ +L+ E++  G+ PT  +  ++I GYCR    S A +F  KM   G  P
Sbjct: 534 AFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAP 593

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           DSISY  LI+G  +E  +D+A  L   M ++GL P  +T   +   +C+      + +IL
Sbjct: 594 DSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVIL 653

Query: 439 WRMIEK 444
            R+ +K
Sbjct: 654 ERLNKK 659



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 175/312 (56%), Gaps = 3/312 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++  CK+ K+  A+M    M+++G+ P+T TY TLI+ +C+ G   +A++LM  MS +G
Sbjct: 391 MISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEG 450

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYNS+++GLCK+GR + A ++L+   Q  +  D  TY  L+ E C++ +M++A 
Sbjct: 451 FFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQAL 510

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               +M + G  PDI  ++TLI  F R   +  +   F E+   GL P    YT +I GY
Sbjct: 511 VFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGY 570

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   V  A+K   +M + GC  D ++Y  +++GLC+   L EA  L++ M+++G+ P  
Sbjct: 571 CREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCE 630

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T  TL + +CK  +   A+ + + + +K     I T +TLI   C   ++  A   +  
Sbjct: 631 VTRVTLTYEYCKTEDFASAMVILERLNKKLW---IRTVHTLIRKLCCEKKVALAALFFHK 687

Query: 301 MISRKISPNYIS 312
           ++ ++++ + ++
Sbjct: 688 LLDKEVNVDRVT 699



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 186/388 (47%), Gaps = 27/388 (6%)

Query: 1   MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
           +++ LCK    + A ++FL  +      P+  TY  +I+ YC+E  L  A  L   M  +
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 414

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
           GL P   TY +LI+G CK G   +A E+++ M   G  P+T TYN+++   C++    EA
Sbjct: 415 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 474

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            ++     +  +  D V+++ LI    +   +++AL++  +M   G  PD  LYT +I  
Sbjct: 475 FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 534

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +CR   + ++ K+ DE+++ G      TY +++ G CR K ++ A   F +M + G  PD
Sbjct: 535 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 594

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA----- 294
             ++  LI G CK+  +++A  L+D M  K + P  VT  TL   +CK  +   A     
Sbjct: 595 SISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILE 654

Query: 295 ---NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI---KPTLVSC 348
               KLW   +             LI   C    V  A   +++++ K +   + TL + 
Sbjct: 655 RLNKKLWIRTVH-----------TLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAF 703

Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGV 376
           NT     C   +       LS+ +S+G+
Sbjct: 704 NTA----CIESNKYALVSDLSERISKGI 727



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%)

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           ++  F     + +A  ++  M NQGLV      N I+        +  +  +   M  +G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + PD  TY  +I G+    N+ EA R+  EM++RGFV D+A
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNA 280


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 200/341 (58%)

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           + ML +G  PD  TYNTL++  C+K  +  A E+  EM  +G  P++++++ LI  F + 
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G+L+ A     EM   GL  + V Y  +I+  C++  V +AL M  +M  KGC  D+ T+
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N+++ GLC+     EA  L+ +ML  GV  +  T+ TLIH   + G M +AL L + M  
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           +    D +TYN LI   C+ G +EK   L+ DM+S+ ++PN IS  ILING C  G++  
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A     +M+ +G+ P +V+ N++I G C++G A +A     K+  EG+ PD+I+YNTLI+
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
              +E   D A  L+S+  + G +P+ +T+ ++++ F ++G
Sbjct: 303 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 123/340 (36%), Positives = 195/340 (57%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M   G  PD  TYNTLI   C++G+L  A +LMN M  KG +P V TY  LI+  CK+GR
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            + A+ VLDEM   GL+ +   YN L+   C+ E + +A  +F +MS +G  PDI +F++
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    +  + + AL  +++M   G++ + + Y  +I+ + R G + EALK+ ++ML +G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
           C +D +TYN ++  LCRA  + +   LF +M+ +G+ P+  +   LI+G C+ GN+  AL
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
                M  + + PDIVTYN+LI+G CK G  ++A  L+  +    I P+ I+Y  LI+ +
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           C  G   +A  L    V  G  P  V+   ++  + + GD
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 118/340 (34%), Positives = 196/340 (57%)

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M   G  PDI +++TLI    + G L  A     EM+  G  P+ + YTI+I+ +C+ G 
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + EA  + DEM  KG  ++ V YN +++ LC+ + + +A ++F +M  +G  PD +TF +
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LI G CK     +AL L+  M  + +  + +TYNTLI  F + G M++A KL  DM+ R 
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
              + I+Y  LI   C  G++ +   L+ +M+ KG+ P  +SCN +I G CR+G+   A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           EFL  M+  G+ PD ++YN+LING  +     +A  L  K++ +G+ PD ITYN +++  
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           C++G   D+ L+L R ++ G  P+  T+  L++  + + +
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 191/339 (56%)

Query: 55  SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
           SM   G  P +FTYN+LI GLCKKG    A+E+++EM   G  P+  TY  L+   C++ 
Sbjct: 4   SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 63

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            + EA  +  EMS +G+A + V ++ LI    ++ ++  AL  F +M S G  PD   + 
Sbjct: 64  RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 123

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I G C+     EAL +  +ML +G + + +TYNT+++   R   + EA  L N+ML R
Sbjct: 124 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G   D  T+  LI   C+ GN+ K L LF+ M  K + P+ ++ N LI+G C+ G ++ A
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 243

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
            +   DMI R ++P+ ++Y  LING C  G   EA  L+ ++  +GI P  ++ NT+I  
Sbjct: 244 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 303

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           +C+ G    A   LS+ V  G  P+ +++  L++ F++E
Sbjct: 304 HCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 342



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 184/326 (56%)

Query: 161 MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM 220
           M S G  PD   Y  +I G C+ G+++ A ++ +EM  KGC  +V+TY  +++  C+   
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
           L EA ++ +EM  +G+  +   +  LI   CKD  +  ALN+F  M+ K  KPDI T+N+
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           LI G CKV + E+A  L+ DM+   +  N I+Y  LI+ +   G + EA +L  +M+ +G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
                ++ N +IK  CR+G+  K       M+S+G++P++IS N LING  R  N+  A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
             +  M ++GL PD++TYN ++ G C+ GR  ++  +  ++  +G+ PD  TY TLI+ H
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +    +A       +  GF+P++ 
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGFIPNEV 330



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 170/292 (58%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK+ +++ A+  L EM  KG+  + V YN LI+A C++  +++A  +   MS KG
Sbjct: 55  LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 114

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP +FT+NSLI GLCK  + + A  +  +ML  G+  +T TYNTL+    R+  M EA 
Sbjct: 115 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 174

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  +M  RG   D ++++ LI    R G +++ L  F +M S GL P+N+   I+ING 
Sbjct: 175 KLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 234

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G +  AL+   +M+ +G   D+VTYN+++NGLC+     EA +LF+++   G+ PD 
Sbjct: 235 CRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 294

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
            T+ TLI  HCK+G  + A  L          P+ VT+  L+  F K G+ E
Sbjct: 295 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 211/381 (55%), Gaps = 4/381 (1%)

Query: 48  EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLL 107
           EA+     +   G+ P    +N L+    + G    A++V DEM +  + P   T+NTL+
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLI 227

Query: 108 VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
              CR  ++   + ++ EMS  GV PD+ ++  LI  F R G+++ A+  F EM+  G+ 
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVN 287

Query: 168 PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDL 227
           P+ V++T +I+ +C+ G V   + +  +M  +G + D+V YN ++NGLCRA+ L  A+ +
Sbjct: 288 PNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESI 347

Query: 228 FNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK 287
             EM   G+ PD  T+TTLI G CKDG ++ A+++   M +K +  D VTY  LI G  K
Sbjct: 348 VEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSK 407

Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
            G    A ++  +M+   + P+  +Y ++I+ +C  G V   F+L  EM  KG KP +V+
Sbjct: 408 AGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVT 467

Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
            N I+ G C+ G    AD  L  M++ GV PD I+YN L++G  +   +  +  L S   
Sbjct: 468 YNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES--- 524

Query: 408 NQGLVPDVITYNVILTGFCRQ 428
           ++G+VPD   Y  +++   ++
Sbjct: 525 SKGMVPDFAVYTSLISELAKK 545



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 231/440 (52%), Gaps = 12/440 (2%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKK-GRCDRAKEVLDEMLQM 94
           L  AY  EG L +A  L+       L+ G+     + +GL  +      A     ++L  
Sbjct: 125 LAAAYADEGLLPDACSLVLL----ALRRGISLPAPVCSGLMSRLPSTPEAYTFYLQLLDA 180

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
           G++P+T  +N L+ +  R   +  A ++F EM RR V P +V+F+TLI    R   LD  
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAV 239

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
              ++EM   G+ PD   Y  +I G+CR G +  A+KM +EM + G   + V + T+++ 
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299

Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
            C+   +    DL+ +M  RGV PD   +  L++G C+  N+  A ++ + M    +KPD
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
            VTY TLIDG CK G+++ A  +   M  +++S + ++Y  LI+G    G   +A R+  
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR 419

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM+   ++P   +   +I  +CR GD     + L +M ++G  P  ++YN ++NG  +  
Sbjct: 420 EMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLG 479

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
            M  A  L+  M N G+ PD ITYN++L G C+ G++ +SE +      KG+ PD + YT
Sbjct: 480 QMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES---SKGMVPDFAVYT 536

Query: 455 TLINGHVSQNNLKEAFRFHD 474
           +LI+    +   K A  +HD
Sbjct: 537 SLISELAKK---KPAKNYHD 553



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 197/349 (56%), Gaps = 4/349 (1%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLI 72
           SA+    EM ++ V P  VT+NTLI+  CR   L+    L   MS  G+KP V+TY +LI
Sbjct: 204 SARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALI 262

Query: 73  NGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA 132
            G C+ GR + A ++ +EM   G++P+   + TL+   C++ N++   +++ +M  RGV 
Sbjct: 263 KGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM 322

Query: 133 PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKM 192
           PD+V+++ L+    R   L  A     EMK+AGL PD V YT +I+G C++G +  A+ +
Sbjct: 323 PDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDI 382

Query: 193 RDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCK 252
           + +M EK   +D VTY  +++GL +A    +A+ +  EM+E  + PD  T+T +I   C+
Sbjct: 383 KQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCR 442

Query: 253 DGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYIS 312
            G++     L   M  K  KP +VTYN +++G CK+G+M+ A+ L   M++  +SP+ I+
Sbjct: 443 KGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDIT 502

Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           Y IL++G C  G V  +  L      KG+ P      ++I    +   A
Sbjct: 503 YNILLDGQCKHGKVANSEELESS---KGMVPDFAVYTSLISELAKKKPA 548



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 199/392 (50%), Gaps = 42/392 (10%)

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
           RRG++   +      G+ SR      A  ++ ++  AG+ P+  L+ +++  + R G ++
Sbjct: 147 RRGIS---LPAPVCSGLMSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELV 203

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
            A K+ DEM  +     VVT+NT+++G+CRA+ L   D L+ EM + GV PD YT+  LI
Sbjct: 204 SARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALI 262

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
            G C+ G M  A+ +F+ M    + P+ V + TLID  CK G +     L+ DM  R + 
Sbjct: 263 KGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM 322

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC----------- 356
           P+ ++Y  L+NG C   ++  A  +  EM   G+KP  V+  T+I G C           
Sbjct: 323 PDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDI 382

Query: 357 ------------------------RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
                                   ++G    A+  L +M+   ++PD+ +Y  +I+ F R
Sbjct: 383 KQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCR 442

Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
           + ++   F L+ +M+N+G  P V+TYNVI+ G C+ G+M +++++L  M+  G++PD  T
Sbjct: 443 KGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDIT 502

Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           Y  L++G      +  +         +G VPD
Sbjct: 503 YNILLDGQCKHGKVANSEELES---SKGMVPD 531


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 244/467 (52%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           L +M + G   +  +YN LI+   + GF  EA ++   M  +GLKP + TY++L+  L K
Sbjct: 180 LNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK 239

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           K   +    +L EM  +GL P+  T+   +    R   + EA EIF  M   G  PD+V+
Sbjct: 240 KRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVT 299

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ LI      GQL+ A   F +MK+ G  PD V+Y  +++ +   G +    +   +M 
Sbjct: 300 YTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQME 359

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G + DVVT+  +++ LC+A+   EA   F+ M ++G+ P+ +T+ TLI G  + G + 
Sbjct: 360 ADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIE 419

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            AL L   M    ++P   TYN  ID F K GE  KA + +  M ++ I PN ++    +
Sbjct: 420 DALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASL 479

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
                MG + EA  ++  +   G+ P  V+ N ++K Y + G   +A   LS+M+  G +
Sbjct: 480 YSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCE 539

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD I  N+LI+   +   +D+A+ +  +M++  L P V+TYN +L+G  ++GR+  +  +
Sbjct: 540 PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              MIEK  +P+  ++ TL++     + ++ A +   +M      PD
Sbjct: 600 FESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPD 646



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 251/487 (51%), Gaps = 2/487 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  L +  KID A      M+ +G  PD VTY  LI+A C  G LE A +L   M   G 
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP    Y +L++     G  D  KE   +M   G  PD  T+  L+   C+  +  EA  
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
            F  M ++G+ P++ +++TLI    R G+++ AL     M+S G+ P    Y I I+ + 
Sbjct: 389 TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFG 448

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++G   +A++  ++M  KG V ++V  N  L  L     L EA  +FN + E G+ PD  
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  ++  + K G +++A+NL   M +   +PD++  N+LID   K G +++A +++  M
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
              K+SP  ++Y  L++G    G V +A  L+  M+ K   P  +S NT++  +C++ + 
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A +  SKM      PD ++YNT+I G ++E  ++ AF    +++ + + PD +T   +
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTL 687

Query: 422 LTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           L G  + G++ D+  I    M +     +RS +  L+ G + +  + +A  F +E++  G
Sbjct: 688 LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747

Query: 481 FVPDDAF 487
              +D+F
Sbjct: 748 ICREDSF 754



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 232/464 (50%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M++K +  D  TY T+  A    G L +   ++N M   G     ++YN LI+ L + G 
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
           C  A EV   M+  GL P   TY+ L+V   +K +      +  EM   G+ P++ +F+ 
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I +  R G++D A   FR M   G  PD V YT++I+  C  G +  A ++  +M   G
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D V Y T+L+       L    + +++M   G  PD  TFT L+   CK  + ++A 
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             FD+M ++ I P++ TYNTLI G  + G +E A KL   M S  + P   +Y I I+ +
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYF 447

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G   +A   + +M  KGI P +V+CN  +      G   +A    + +   G+ PDS
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YN ++  + +   +D+A  L+S+M   G  PDVI  N ++    + GR+ ++  +  R
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDR 567

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M +  L+P   TY TL++G   +  +++A    + M+++   P+
Sbjct: 568 MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPN 611



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 245/485 (50%), Gaps = 2/485 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           AL K    +   + L EME  G+ P+  T+   I    R G ++EA+++   M  +G  P
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + TY  LI+ LC  G+ + AKE+  +M   G  PD   Y TLL +     ++   +E +
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M   G  PD+V+F+ L+ +  +    D A   F  M+  G++P+   Y  +I G  R 
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +ALK+   M   G      TYN  ++   ++    +A + F +M  +G+ P+    
Sbjct: 416 GRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
              ++   + G + +A  +F+ + +  + PD VTYN ++  + KVG++++A  L ++MI 
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
               P+ I    LI+     G V EA++++  M    + PT+V+ NT++ G  + G   K
Sbjct: 536 NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQK 595

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E    M+ +   P++IS+NTL++ F + + ++ A  + SKM      PDV+TYN ++ 
Sbjct: 596 AIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF-HDEMLQRGFV 482
           G  ++ +++ +    +  ++K ++PD  T  TL+ G V    + +A     D M Q  F 
Sbjct: 656 GLIKENKVNHA-FWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714

Query: 483 PDDAF 487
            + +F
Sbjct: 715 VNRSF 719



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 233/464 (50%), Gaps = 1/464 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  +G+ P   TY+ L+ A  ++   E    L+  M   GL+P V+T+   I  L + G+
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGK 277

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A E+   M   G  PD  TY  L+   C    +  A+E+F +M   G  PD V + T
Sbjct: 278 IDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYIT 337

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  F+  G LD    ++ +M++ G +PD V +TI+++  C+     EA    D M ++G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            + ++ TYNT++ GL RA  + +A  L   M   GV P  YT+   I    K G   KA+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAV 457

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             F+ M  K I P+IV  N  +    ++G + +A  ++  +    ++P+ ++Y +++  Y
Sbjct: 458 ETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCY 517

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G V EA  L  EM+  G +P ++  N++I    ++G   +A +   +M    + P  
Sbjct: 518 SKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 577

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YNTL++G  +E  + KA  L   M  +   P+ I++N +L  FC+   +  +  +  +
Sbjct: 578 VTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSK 637

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M      PD  TY T+I G + +N +  AF F  + L++   PD
Sbjct: 638 MTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPD 680



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 258/555 (46%), Gaps = 71/555 (12%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++++L K  ++D A      M+   + P  VTYNTL++   +EG +++A +L  SM  K 
Sbjct: 548  LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P   ++N+L++  CK    + A ++  +M  M   PD  TYNT++    ++  ++ A 
Sbjct: 608  CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667

Query: 121  EIFCEMSRR------------------GVAPDIVSFST-----------------LIGIF 145
              F ++ +                   G   D +S +                  L+G  
Sbjct: 668  WFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGT 727

Query: 146  SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK------ 199
                ++D+A+++  E+   G+  ++     ++   C++   L A ++ D+  +K      
Sbjct: 728  LVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPT 787

Query: 200  ------------------------------GCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
                                          GC  D  T+N +L    ++  +TE  +L+ 
Sbjct: 788  LASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYK 847

Query: 230  EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
            EM+ R   PD  T+  +I    K  N++KAL+ F  +     +P   TY  LIDG  KVG
Sbjct: 848  EMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVG 907

Query: 290  EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
             +E+A +L+ +M      PN   + ILINGY  +G    A +L+  MV +GI+P L S  
Sbjct: 908  RLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYT 967

Query: 350  TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
             ++   C +G   +A  + +++ S G+DPD I+YN +ING  + + M++A AL ++M N+
Sbjct: 968  ILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR 1027

Query: 410  GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            G+VPD+ TYN ++      G +  ++ +   +   GL PD  TY  LI G+    N + A
Sbjct: 1028 GIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHA 1087

Query: 470  FRFHDEMLQRGFVPD 484
            +  +  M+  G  P+
Sbjct: 1088 YTVYKNMMVDGCNPN 1102



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 247/521 (47%), Gaps = 38/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC   ++++AK    +M+  G  PD V Y TL++ +   G L+   +  + M   G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+  L++ LCK    D A    D M + G+ P+  TYNTL+    R   + +A 
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M   GV P   +++  I  F ++G+  +A+  F +MK+ G+VP+ V     +   
Sbjct: 423 KLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + EA  M + + E G   D VTYN ++    +   + EA +L +EM+  G  PD 
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
               +LI    K G +++A  +FD M    + P +VTYNTL+ G  K G ++KA +L+  
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +K SPN IS+  L++ +C    V  A +++ +M     KP +++ NT+I G  +   
Sbjct: 603 MIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL-------VSKMENQGLVP 413
            + A  F  ++  + + PD ++  TL+ G V+   +  A ++       V    N+    
Sbjct: 663 VNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721

Query: 414 D---------------VITYNVILTGFCRQGRM----------HDSELILWRMIEK---- 444
           D               +    ++L G CR+             H  EL  +++ +K    
Sbjct: 722 DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781

Query: 445 -GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G++P  ++Y  LI   +  +  ++A+    +M   G  PD
Sbjct: 782 LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPD 822



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 247/557 (44%), Gaps = 71/557 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK    D A      M ++G+ P+  TYNTLI    R G +E+A +L+ +M   G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  +TYN  I+   K G   +A E  ++M   G+ P+    N  L        + EA+
Sbjct: 433 VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  +   G+APD V+++ ++  +S+ GQ+D A+    EM   G  PD ++   +I+  
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V EA +M D M +      VVTYNT+L+GL +   + +A +LF  M+E+   P+ 
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNT 612

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT-------------------- 280
            +F TL+   CK+  +  AL +F  MT    KPD++TYNT                    
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672

Query: 281 --------------LIDGFCKVGEMEKA----------------NKLWADMISRKISPNY 310
                         L+ G  K G++  A                   W D++   +    
Sbjct: 673 LKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAE 732

Query: 311 ISYGIL------INGYCS------------MGHVTE--AFRLWYEMVGK-GIKPTLVSCN 349
           +   I+      +NG C               H  E  A++++ +   K GI PTL S N
Sbjct: 733 MDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYN 792

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I          KA +    M + G  PD+ ++N L+    +   + + F L  +M ++
Sbjct: 793 CLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR 852

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
              PD ITYN++++   +   +  +    + ++     P   TY  LI+G      L+EA
Sbjct: 853 RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912

Query: 470 FRFHDEMLQRGFVPDDA 486
            R  +EM   G  P+ A
Sbjct: 913 MRLFEEMSDYGCKPNCA 929



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 238/495 (48%), Gaps = 38/495 (7%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++  CK+ +++ A     +M      PD +TYNT+I    +E  +  AF   + +  K 
Sbjct: 618  LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KS 676

Query: 61   LKPGVFTYNSLINGLCKKGRC------------------------------------DRA 84
            + P   T  +L+ GL K G+                                     D+A
Sbjct: 677  MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKA 736

Query: 85   KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR-GVAPDIVSFSTLIG 143
                +E++  G+  + +    L+   C+ +    A +IF + +++ G++P + S++ LIG
Sbjct: 737  IIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIG 796

Query: 144  IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
                    ++A   F++MK+ G  PD   + +++  + ++G + E  ++  EM+ + C  
Sbjct: 797  ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP 856

Query: 204  DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
            D +TYN +++ L ++  L +A D F +++     P   T+  LI G  K G + +A+ LF
Sbjct: 857  DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916

Query: 264  DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            + M+    KP+   +N LI+G+ K+G+ E A +L+  M++  I P+  SY IL++  C  
Sbjct: 917  EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLA 976

Query: 324  GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
            G V EA   + E+   G+ P  ++ N II G  +S    +A    ++M + G+ PD  +Y
Sbjct: 977  GRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTY 1036

Query: 384  NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            N+L+        +++A  +  +++  GL PDV TYN ++ G+        +  +   M+ 
Sbjct: 1037 NSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMV 1096

Query: 444  KGLNPDRSTYTTLIN 458
             G NP+  TY  L N
Sbjct: 1097 DGCNPNIGTYAQLPN 1111



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 209/438 (47%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +E+   +   M  K ++  + TY ++   L  +G   +   VL++M + G   +  +YN 
Sbjct: 138 VEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+    +     EA E++  M   G+ P + ++S L+    +    +  ++  +EM+  G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           L P+   +TI I    R G + EA ++   M ++GC  D+VTY  +++ LC A  L  A 
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +LF +M   G  PD   + TL+      G+++     +  M      PD+VT+  L+D  
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK  + ++A   +  M  + I PN  +Y  LI G    G + +A +L   M   G++PT 
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTA 437

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            + N  I  + +SG+  KA E   KM ++G+ P+ ++ N  +        + +A  + + 
Sbjct: 438 YTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNG 497

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +   GL PD +TYN+++  + + G++ ++  +L  MI  G  PD     +LI+       
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 466 LKEAFRFHDEMLQRGFVP 483
           + EA++  D M      P
Sbjct: 558 VDEAWQMFDRMKDMKLSP 575



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 184/406 (45%), Gaps = 35/406 (8%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +   +F  M ++ +  D+ ++ T+    S  G L +      +M+ AG V +   Y
Sbjct: 136 DKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSY 195

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +I+   ++GF  EAL++   M+ +G    + TY+ ++  L + +       L  EM +
Sbjct: 196 NGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMED 255

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+ P+ YTFT  I    + G +++A  +F  M  +   PD+VTY  LID  C  G++E 
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315

Query: 294 ANKL-----------------------------------WADMISRKISPNYISYGILIN 318
           A +L                                   W+ M +    P+ +++ IL++
Sbjct: 316 AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
             C      EAF  +  M  +GI P L + NT+I G  R+G    A + L  M S GV P
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQP 435

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
            + +YN  I+ F +     KA     KM+ +G+VP+++  N  L      GR+ +++ + 
Sbjct: 436 TAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF 495

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             + E GL PD  TY  ++  +     + EA     EM++ G  PD
Sbjct: 496 NGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 132/408 (32%), Positives = 224/408 (54%), Gaps = 3/408 (0%)

Query: 79  GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
           GR + A  ++ +M   GLSP + T N +L  +     +  AE +F EMS RGV PD  SF
Sbjct: 184 GRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSF 243

Query: 139 STL-IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
             + IG F R+G++  A  +   M   G +PDN   T+I++  C NG V  A+    +M+
Sbjct: 244 KLMVIGCF-RDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMI 302

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
           + G   +++ + ++++GLC+   + +A ++  EM+  G  P+ YT T LI G CK G   
Sbjct: 303 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 362

Query: 258 KALNLFDIMTQKSI-KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           KA  LF  + +  I KP++ TY ++I G+CK  ++ +A  L++ M  + + PN  +Y  L
Sbjct: 363 KAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 422

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ING+C  G+   A+ L   M  +G +P + + N +I   C+   A +A E L+K  S G+
Sbjct: 423 INGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGL 482

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
           + D ++Y  LI    ++ ++ +A A   +M   G   D+   N+++  FCRQ +M +SE 
Sbjct: 483 EADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 542

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   ++  GL P + TYT++I+G+  + +   A ++   M + G VPD
Sbjct: 543 LFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPD 590



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 234/443 (52%), Gaps = 1/443 (0%)

Query: 44  GFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY 103
           G L EA  ++  M  +GL P   T N ++    + G  D A+ V DEM   G+ PD++++
Sbjct: 184 GRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSF 243

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
             +++   R   + EA+     M +RG  PD  + + ++     NG ++RA+ YFR+M  
Sbjct: 244 KLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMID 303

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
            G  P+ + +T +I+G C+ G + +A +M +EM+  G   +V T+  +++GLC+     +
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 363

Query: 224 ADDLFNEMLERGVF-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
           A  LF +++   ++ P+ +T+T++I G+CK+  +N+A  LF  M ++ + P++ TY TLI
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           +G CK G  ++A +L   M      PN  +Y  +I+  C      EA+ L  +    G++
Sbjct: 424 NGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLE 483

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
              V+   +I+  C+  D  +A  F  +M   G + D    N LI  F R++ M ++  L
Sbjct: 484 ADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 543

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
              + + GLVP   TY  +++G+C++G    +      M   G  PD  TY +LI+G   
Sbjct: 544 FQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 603

Query: 463 QNNLKEAFRFHDEMLQRGFVPDD 485
           ++ + EA + ++ M+ RG  P +
Sbjct: 604 KSMVDEACKLYEAMIDRGLSPPE 626



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 237/461 (51%), Gaps = 1/461 (0%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           +++ A   + +M+ +G+ P ++T N ++      G ++ A  + + MS +G+ P   ++ 
Sbjct: 185 RLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFK 244

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
            ++ G  + G+   A   L  M+Q G  PD AT   +L   C    ++ A   F +M   
Sbjct: 245 LMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDL 304

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G  P++++F++LI    + G + +A     EM   G  P+   +T +I+G C+ G+  +A
Sbjct: 305 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 364

Query: 190 LKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
            ++  +++       +V TY +++ G C+   L  A+ LF+ M E+G+FP+  T+TTLI+
Sbjct: 365 FRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 424

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           GHCK GN ++A  L ++M  +  +P+I TYN +ID  CK     +A +L     S  +  
Sbjct: 425 GHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEA 484

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
           + ++Y ILI   C    + +A   +  M   G +  +   N +I  +CR     +++   
Sbjct: 485 DGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 544

Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
             +VS G+ P   +Y ++I+G+ +E + D A      M+  G VPD  TY  +++G C++
Sbjct: 545 QLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 604

Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
             + ++  +   MI++GL+P   T  TL   +  +N+   A
Sbjct: 605 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASA 645



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 236/469 (50%), Gaps = 6/469 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV    +D KI  A  +L  M Q+G  PD  T   +++A C  G +  A      M   G
Sbjct: 246 MVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLG 305

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP +  + SLI+GLCKKG   +A E+L+EM++ G  P+  T+  L+   C++    +A 
Sbjct: 306 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 365

Query: 121 EIFCEMSRRGV-APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +F ++ R  +  P++ +++++IG + +  +L+RA M F  MK  GL P+   YT +ING
Sbjct: 366 RLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 425

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G    A ++ + M ++G   ++ TYN +++ LC+     EA +L N+    G+  D
Sbjct: 426 HCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEAD 485

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T LI   CK  ++ +AL  F  M +   + D+   N LI  FC+  +M+++ +L+ 
Sbjct: 486 GVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 545

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
            ++S  + P   +Y  +I+GYC  G    A + ++ M   G  P   +  ++I G C+  
Sbjct: 546 LVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS 605

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A +    M+  G+ P  ++  TL   + +  +   A  ++  ++ +  +  V T  
Sbjct: 606 MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLWIRTVRT-- 663

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING--HVSQNNL 466
            ++   C + ++  + L   +++EK  + DR T            +NNL
Sbjct: 664 -LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNL 711



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 152/335 (45%), Gaps = 67/335 (20%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+   CK+ K++ A+M    M+++G++P+  TY TLIN +C+ G  + A++LMN M  +G
Sbjct: 387 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEG 446

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +P ++TYN++I+ LCKK R   A E+L++    GL  D  TY  L+ E C++ ++ +A 
Sbjct: 447 FRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQAL 506

Query: 121 EIFCEMSRRG-----------------------------------VAPDIVSFSTLIGIF 145
             FC M++ G                                   + P   +++++I  +
Sbjct: 507 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGY 566

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV--- 202
            + G  D AL YF  MK  G VPD+  Y  +I+G C+   V EA K+ + M+++G     
Sbjct: 567 CKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 626

Query: 203 -----------------------------MDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
                                        + + T  T++  LC  K +  A   F ++LE
Sbjct: 627 VTRVTLAYEYCKRNDSASAMIVLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLE 686

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           +    D  T         + G  N   +L + +++
Sbjct: 687 KDSSADRVTLAAFTTACSESGKNNLVADLTERISR 721



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%)

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           ++  F     +++A  +V  M+NQGL P  IT N +L      G +  +E +   M  +G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + PD S++  ++ G      ++EA R+   M+QRGF+PD+A
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNA 276


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 246/469 (52%), Gaps = 23/469 (4%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           + P+ +T+N +I   C+ G +++A Q+   M     +P V+TY +L++GLCK  R D A 
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +LDEM   G  P   T+N L+   C+K +++   ++   M  +G AP+ V+++TLI   
Sbjct: 225 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGL 284

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+L++A+     M S+  VP+ V Y  IING  + G  L+  ++   M E+G  ++ 
Sbjct: 285 CLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNE 344

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y+ +++GL +     EA  LF EM  +    +   ++ +I G C+DG  ++AL +   
Sbjct: 345 YVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSE 404

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           MT    KP+  TY++L+ GF + G   KA ++W DM     + N + Y +LI+G C  G 
Sbjct: 405 MTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGK 464

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD--PDSISY 383
           V EA  +W +M+GKG KP +V+  ++I G   +G    A +  ++M+ +  D  PD ++Y
Sbjct: 465 VKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTY 524

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL--------------------- 422
           N L+N   ++ ++ +A  L++ M ++G  PD++T  + L                     
Sbjct: 525 NILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLV 584

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
               ++ R+  +  I+  M++K L P  ST+T ++    +   ++ A +
Sbjct: 585 VRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQ 633



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 220/426 (51%), Gaps = 5/426 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSG-KG--LKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           ++N+++N   +EG    A +  N + G KG  + P V T+N +I  +CK G  D A ++ 
Sbjct: 133 SFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMF 192

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            +M      PD  TY TL+   C+ + + EA  +  EM   G  P  V+F+ LI    + 
Sbjct: 193 RDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 252

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L R       M   G  P+ V Y  +I+G C  G + +A+ + D M+   CV +VVTY
Sbjct: 253 GDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTY 312

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
            TI+NGL +     +   +   M ERG   + Y ++ LI G  K+G   +A+ LF  MT 
Sbjct: 313 GTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTV 372

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           K  + + + Y+ +IDG C+ G+ ++A ++ ++M + +  PN  +Y  L+ G+   G+  +
Sbjct: 373 KECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHK 432

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +W +M         V  + +I G C+ G   +A    ++M+ +G  PD ++Y ++IN
Sbjct: 433 AIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMIN 492

Query: 389 GFVREENMDKAFALVSKM--ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           G      ++ A  L ++M  +     PDV+TYN++L   C+Q  +  +  +L  M+++G 
Sbjct: 493 GLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGC 552

Query: 447 NPDRST 452
           +PD  T
Sbjct: 553 DPDLVT 558



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 228/458 (49%), Gaps = 6/458 (1%)

Query: 33  YNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           +  +  AY +    E+A  L + M+ +   K  V ++NS++N + ++G   RA E  + +
Sbjct: 98  FVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHV 157

Query: 92  LQ---MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
           +    + +SP+  T+N ++   C+   + +A ++F +M      PD+ ++ TL+    + 
Sbjct: 158 IGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKA 217

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
            ++D A+    EM+  G  P  V + ++ING C+ G +    K+ D M  KGC  + VTY
Sbjct: 218 DRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTY 277

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           NT+++GLC    L +A  L + M+     P+  T+ T+I+G  K G       +  +M +
Sbjct: 278 NTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEE 337

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           +    +   Y+ LI G  K G+ ++A +L+ +M  ++   N I Y  +I+G C  G   E
Sbjct: 338 RGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDE 397

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +  EM     KP   + ++++KG+  +G+  KA E    M       + + Y+ LI+
Sbjct: 398 ALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIH 457

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI--EKGL 446
           G  ++  + +A  + ++M  +G  PDV+ Y  ++ G    G + D+  +   M+  E   
Sbjct: 458 GLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDS 517

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            PD  TY  L+N    Q+++  A    + ML RG  PD
Sbjct: 518 QPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPD 555



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 3/317 (0%)

Query: 173 YTIIINGYCRNGFVLEALKMRDEML-EKGCVM--DVVTYNTILNGLCRAKMLTEADDLFN 229
           +  ++N   + G    AL+  + ++  KG  +  +V+T+N ++  +C+  ++ +A  +F 
Sbjct: 134 FNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFR 193

Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
           +M      PD YT+ TL+ G CK   +++A++L D M      P  VT+N LI+G CK G
Sbjct: 194 DMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKG 253

Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
           ++ +  KL  +M  +  +PN ++Y  LI+G C  G + +A  L   MV     P +V+  
Sbjct: 254 DLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYG 313

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
           TII G  + G A      L+ M   G   +   Y+ LI+G  +E    +A  L  +M  +
Sbjct: 314 TIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVK 373

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
               + I Y+ ++ G CR G+  ++  +L  M      P+  TY++L+ G     N  +A
Sbjct: 374 ECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKA 433

Query: 470 FRFHDEMLQRGFVPDDA 486
                +M +  F  ++ 
Sbjct: 434 IEMWKDMAKHNFTQNEV 450


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 257/521 (49%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCK +++D A      +E+    P T  YNT+I  Y   G  +EA+ L+     KG
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 61  LKPGVF----------------------------------TYNSLINGLCKKGRCDRAKE 86
             P V                                   TYN LI+ LC+ G+ D A E
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFE 398

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           + D M + GL P+  T N ++   C+ + + EA  IF +M  +   PD ++F +LI    
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLG 458

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + G++D A   + +M  +    ++++YT +I  +  +G   +  K+  +M+ + C  D+ 
Sbjct: 459 KVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQ 518

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
             NT ++ + +A    +   +F E+  R   PD  +++ LIHG  K G  N+   LF  M
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            ++    D   YN +IDGFCK G++ KA +L  +M ++   P  ++YG +I+G   +  +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA+ L+ E   K I+  +V  +++I G+ + G   +A   L +++ +G+ P+  ++N+L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSL 698

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-G 445
           ++  V+ E +++A      M+     P+ +TY +++ G C+  R  +   + W+ ++K G
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV-RKFNKAFVFWQEMQKQG 757

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + P   +YTT+I+G     N+ EA    D     G VPD A
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 239/469 (50%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LC+  K+D A      M++ G++P+  T N +++  C+   L+EA  +   M  K 
Sbjct: 383 LIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKV 442

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   T+ SLI+GL K GR D A ++ ++ML      ++  Y +L+          +  
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I+ +M  +  +PD+   +T +    + G+ ++    F E+KS   VPD   Y+I+I+G 
Sbjct: 503 KIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGL 562

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + GF  E  ++   M E+GCV+D   YN +++G C+   + +A  L  EM  +G  P  
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ ++I G  K   +++A  LF+    K I+ ++V Y++LIDGF KVG +++A  +  +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++ + ++PN  ++  L++       + EA   +  M      P  V+   +I G C+   
Sbjct: 683 LMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            +KA  F  +M  +G+ P +ISY T+I+G  +  N+ +A AL  + +  G VPD   YN 
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
           ++ G     R  D+  +      +GL+    T   L++     + L++A
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 237/510 (46%), Gaps = 36/510 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           MV +  K +K+      +  M +    P    Y TLI A+      +    L   M   G
Sbjct: 139 MVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-------------------------- 94
            +P V  + +LI G  K+GR D A  +LDEM                             
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258

Query: 95  ---------GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                    GL PD  TY +++   C+   + EA E+F  + +    P   +++T+I  +
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+ D A       ++ G +P  + Y  I+    + G V EAL++ +EM +K    ++
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNL 377

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            TYN +++ LCRA  L  A +L + M + G+FP+  T   ++   CK   +++A  +F+ 
Sbjct: 378 STYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQ 437

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M  K   PD +T+ +LIDG  KVG ++ A K++  M+      N I Y  LI  + + G 
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
             +  +++ +MV +   P L   NT +    ++G+  K      ++ S    PD+ SY+ 
Sbjct: 498 KEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSI 557

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI+G ++    ++ + L   M+ QG V D   YN+++ GFC+ G+++ +  +L  M  KG
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
             P   TY ++I+G    + L EA+   +E
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 212/453 (46%), Gaps = 1/453 (0%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
           +YN+L+    R    +   Q++  MS  G  P V T   ++    K  +     +V+  M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
            +    P  + Y TL+       +      +F +M   G  P +  F+TLI  F++ G++
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
           D AL    EMKS+ L  D VLY + I+ + + G V  A K   E+   G   D VTY ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           +  LC+A  L EA ++F  + +    P  Y + T+I G+   G  ++A +L +    K  
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
            P ++ YN ++    K+G++++A +++ +M  +  +PN  +Y ILI+  C  G +  AF 
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFE 398

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L   M   G+ P + + N ++   C+S    +A     +M  +   PD I++ +LI+G  
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLG 458

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           +   +D A+ +  KM +     + I Y  ++  F   GR  D   I   M+ +  +PD  
Sbjct: 459 KVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQ 518

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              T ++        ++     +E+  R FVPD
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPD 551



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 166/347 (47%), Gaps = 6/347 (1%)

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLV---PDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           +IG+  R   ++RA+ YFR  +    +   P++    +++   CRN   L+  ++  EM 
Sbjct: 68  VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD--QILGEMS 125

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G    V T   ++    +A  L E  D+   M +    P F  +TTLI       + +
Sbjct: 126 VAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSD 185

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
             L LF  M +   +P +  + TLI GF K G ++ A  L  +M S  +  + + Y + I
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI 245

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
           + +  +G V  A++ ++E+   G+KP  V+  ++I   C++    +A E    +      
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           P + +YNT+I G+      D+A++L+ +   +G +P VI YN ILT   + G++ D  L 
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV-DEALR 364

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++  ++K   P+ STY  LI+       L  AF   D M + G  P+
Sbjct: 365 VFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPN 411



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 63/151 (41%)

Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
           EM   G  P++ +C  ++    ++    +  + +  M      P   +Y TLI  F    
Sbjct: 123 EMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVN 182

Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
           + D    L  +M+  G  P V  +  ++ GF ++GR+  +  +L  M    L+ D   Y 
Sbjct: 183 HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN 242

Query: 455 TLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
             I+       +  A++F  E+   G  PD+
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 252/493 (51%), Gaps = 15/493 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  ++  A+    EM  +G   D  +   L+   C EG +E   +L+    GKG
Sbjct: 176 LLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKG 235

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P +  YN++I G CK G  + A  V  E+   G  P   T+ T++   C++ +   ++
Sbjct: 236 CIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASD 295

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNG-QLDRALMYFREMKSAGLV------PDNVLY 173
            +  E+  RG+   +   + +I    R+G ++D A       +S G +      PD   Y
Sbjct: 296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA-------ESIGWIIANDCKPDVATY 348

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
            I+IN  C+ G    A+   DE  +KG + + ++Y  ++   C++K    A  L  +M E
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           RG  PD  T+  LIHG    G+M+ A+N+   +  + + PD   YN L+ G CK G    
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
           A  L+++M+ R I P+   Y  LI+G+   G   EA +++   V KG+K  +V  N +IK
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           G+CRSG   +A   +++M  E + PD  +Y+T+I+G+V++++M  A  +   ME     P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN-LKEAFRF 472
           +V+TY  ++ GFC QG    +E     M  + L P+  TYTTLI     +++ L++A  +
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648

Query: 473 HDEMLQRGFVPDD 485
            + M+    VP++
Sbjct: 649 WELMMTNKCVPNE 661



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 254/499 (50%), Gaps = 15/499 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK   I++A +   E++ KG  P   T+ T+IN +C+EG    + +L++ +  +G
Sbjct: 246 IIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERG 305

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+  V+  N++I+   + G      E +  ++     PD ATYN L+   C++     A 
Sbjct: 306 LRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAV 365

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
               E S++G+ P+ +S++ LI  + ++ + D A     +M   G  PD V Y I+I+G 
Sbjct: 366 GFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGL 425

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G + +A+ M+ +++++G   D   YN +++GLC+      A  LF+EML+R + PD 
Sbjct: 426 VVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDA 485

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y + TLI G  + G+ ++A  +F +  +K +K D+V +N +I GFC+ G +++A      
Sbjct: 486 YVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR 545

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M    + P+  +Y  +I+GY     +  A +++  M     KP +V+  ++I G+C  GD
Sbjct: 546 MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGD 605

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN-MDKAFALVSKMENQGLVPDVITYN 419
              A+E   +M    + P+ ++Y TLI    +E + ++KA      M     VP+ +T+N
Sbjct: 606 FKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFN 665

Query: 420 VILTGFCRQ----------GRMHDSELI----LWRMIEKGLNPDRSTYTTLINGHVSQNN 465
            +L GF ++          G  H    +      RM   G +   + Y + +        
Sbjct: 666 CLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGM 725

Query: 466 LKEAFRFHDEMLQRGFVPD 484
           +K A  F D+M+++GF PD
Sbjct: 726 VKTACMFQDKMVKKGFSPD 744



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/553 (25%), Positives = 254/553 (45%), Gaps = 85/553 (15%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  +C + K++  +  +     KG  P+ V YNT+I  YC+ G +E A+ +   +  KG
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL------------------------ 96
             P + T+ ++ING CK+G    +  +L E+ + GL                        
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330

Query: 97  -----------SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                       PD ATYN L+   C++     A     E S++G+ P+ +S++ LI  +
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            ++ + D A     +M   G  PD V Y I+I+G   +G + +A+ M+ +++++G   D 
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             YN +++GLC+      A  LF+EML+R + PD Y + TLI G  + G+ ++A  +F +
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
             +K +K D+V +N +I GFC+ G +++A      M    + P+  +Y  +I+GY     
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           +  A +++  M     KP +V+  ++I G+C  GD   A+E   +M    + P+ ++Y T
Sbjct: 571 MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTT 630

Query: 386 LINGFVREEN-MDKAFALVSKMENQGLVPDVITYNVILTGF------------------- 425
           LI    +E + ++KA      M     VP+ +T+N +L GF                   
Sbjct: 631 LIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQ 690

Query: 426 ------------------------------CRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
                                         C  G +  + +   +M++KG +PD  ++  
Sbjct: 691 SSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAA 750

Query: 456 LINGHVSQNNLKE 468
           +++G     N K+
Sbjct: 751 ILHGFCVVGNSKQ 763



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 228/457 (49%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           PD +  N+L++   +   L +A ++ + M  +G     ++   L+ G+C +G+ +  +++
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
           ++     G  P+   YNT++   C+  ++  A  +F E+  +G  P + +F T+I  F +
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G    +     E+K  GL         II+   R+G+ ++  +    ++   C  DV T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           YN ++N LC+      A    +E  ++G+ P+  ++  LI  +CK    + A  L   M 
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           ++  KPDIVTY  LI G    G M+ A  +   +I R +SP+   Y +L++G C  G   
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
            A  L+ EM+ + I P      T+I G+ RSGD  +A +  S  V +GV  D + +N +I
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
            GF R   +D+A A +++M  + LVPD  TY+ I+ G+ +Q  M  +  I   M +    
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK 587

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P+  TYT+LING   Q + K A     EM  R  VP+
Sbjct: 588 PNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 166/312 (53%), Gaps = 1/312 (0%)

Query: 176 IINGYCRNGFVLEALKMRDEMLE-KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           +++ Y  +G + +A+++ D ++E    V DV+  N++L+ L +++ L +A  +++EM +R
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G   D Y+   L+ G C +G +     L +    K   P+IV YNT+I G+CK+G++E A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             ++ ++  +   P   ++G +ING+C  G    + RL  E+  +G++ ++   N II  
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             R G      E +  +++    PD  +YN LIN   +E   + A   + +   +GL+P+
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            ++Y  ++  +C+      +  +L +M E+G  PD  TY  LI+G V   ++ +A     
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439

Query: 475 EMLQRGFVPDDA 486
           +++ RG  PD A
Sbjct: 440 KLIDRGVSPDAA 451



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 190/409 (46%), Gaps = 36/409 (8%)

Query: 112 RKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL-MYFREMKSAGLVPDN 170
           R    +E E++   +    V     + S ++  ++ +G L +A+ +Y   ++    VPD 
Sbjct: 111 RYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDV 170

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           +    +++   ++  + +A K+ DEM ++G  +D  +   ++ G+C    +     L   
Sbjct: 171 IACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEG 230

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
              +G  P+   + T+I G+CK G++  A  +F  +  K   P + T+ T+I+GFCK G+
Sbjct: 231 RWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGD 290

Query: 291 MEKANKLWAD-----------------------------------MISRKISPNYISYGI 315
              +++L ++                                   +I+    P+  +Y I
Sbjct: 291 FVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNI 350

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
           LIN  C  G    A     E   KG+ P  +S   +I+ YC+S +   A + L +M   G
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
             PD ++Y  LI+G V   +MD A  +  K+ ++G+ PD   YN++++G C+ GR   ++
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           L+   M+++ + PD   Y TLI+G +   +  EA +     +++G   D
Sbjct: 471 LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 145/312 (46%), Gaps = 50/312 (16%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK  +   AK+   EM  + + PD   Y TLI+ + R G  +EA ++ +    KG
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V  +N++I G C+ G  D A   ++ M +  L PD  TY+T++    ++++M+ A 
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +IF  M +    P++V++++LI  F   G    A   F+EM+   LVP+ V YT +I   
Sbjct: 576 KIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635

Query: 181 CRNGFVLE-ALKMRDEMLEKGCVMDVVTYNTILNGLCR---AKMLTEAD-------DLFN 229
            +    LE A+   + M+   CV + VT+N +L G  +    K+L E D        LF+
Sbjct: 636 AKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFS 695

Query: 230 E---------------------------------------MLERGVFPDFYTFTTLIHGH 250
           E                                       M+++G  PD  +F  ++HG 
Sbjct: 696 EFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755

Query: 251 CKDGNMNKALNL 262
           C  GN  +  N+
Sbjct: 756 CVVGNSKQWRNM 767


>gi|414878622|tpg|DAA55753.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
          Length = 573

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 253/507 (49%), Gaps = 52/507 (10%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ K+  A+  L    + G  PD  +Y+ LI+++C+ G LE+A+  +  M   G
Sbjct: 57  VIDGLCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHG 116

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++   +    L+  L K G          +   +G+  D   YN  +   C+  NM+EA 
Sbjct: 117 IEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAV 176

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM    + PD + ++ LI  +   G+ + A   F EM  A + PD V Y I+ +GY
Sbjct: 177 KLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGY 236

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV---- 236
            RNG V++   + + M+++G   + +TY   + G CR   L+EA+ LFN + ERG+    
Sbjct: 237 SRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNIN 296

Query: 237 -------------------------------FPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                            D  + + LI+G C+D  + +A  +  +
Sbjct: 297 VLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKM 356

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M +K++ PD+++Y+ LI  +C+  +M  A   + DM+ R +S + I Y +L+NGYC +G 
Sbjct: 357 MLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGLS-DVIVYTVLMNGYCKVGR 415

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR-------SGDASKADEF---------LS 369
           + EA  L+ +M+  GIKP +V+   ++ G+ +        G A +   F         L+
Sbjct: 416 LQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLN 475

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
            M    ++PD   Y  LI+G  + E +++A  L  +M  +GL+PDV TY  ++ G+C QG
Sbjct: 476 SMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQG 535

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTL 456
            +  +E +   MI KG+ PD  +++ L
Sbjct: 536 EIAKAEDLFQEMIAKGMKPDVLSFSVL 562



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 214/409 (52%), Gaps = 17/409 (4%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++A CK   ++ A   L EM    + PD + Y  LIN YC +G  E A+Q+   M    +
Sbjct: 163 MDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANI 222

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP V TYN L +G  + G   +  ++L+ M+  GL P++ TY   +   CR  N+SEAE 
Sbjct: 223 KPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEV 282

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F  +  RG+    V + +++  +  +G  D A M F  +   G + D +  + +ING C
Sbjct: 283 LFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLC 342

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R+  V EA  +   MLEK  V DV++Y+ +++  C+ + +  A   F++M+ERG   D  
Sbjct: 343 RDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERG-LSDVI 401

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME--------- 292
            +T L++G+CK G + +A  LF  M    IKPD+V Y  L+DG  K    +         
Sbjct: 402 VYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKER 461

Query: 293 -------KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
                  K   L   M   +I P+   Y +LI+G C   ++ EA  L+ EM+ KG+ P +
Sbjct: 462 RTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDV 521

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
            +   +I GYC  G+ +KA++   +M+++G+ PD +S++ L    +R E
Sbjct: 522 HTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPDVLSFSVLHKRTLRHE 570



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 226/431 (52%), Gaps = 7/431 (1%)

Query: 60  GLKPGVFTYNSLINGLCKKGRCD------RAKEVLDEMLQMGLSPDTATYNTLLVESCRK 113
           G+K  V  ++S I GLC  G+ D      R   VL E+ Q  +  +   YN ++   C++
Sbjct: 5   GVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDGLCKE 64

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
             + EAE++    +R G APD+ S+S LI    + G L++A  +  +M S G+  +  + 
Sbjct: 65  MKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIV 124

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             ++    + G V E +    +  + G  +D V YN  ++  C+   + EA  L NEM+ 
Sbjct: 125 AYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMA 184

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
             + PD   +T LI+G+C  G    A  +F+ M + +IKPD+VTYN L  G+ + G + K
Sbjct: 185 GSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMK 244

Query: 294 ANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
              +   M+ + + PN ++YGI I G+C  G+++EA  L+  +  +GI    V   +++ 
Sbjct: 245 VFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVC 304

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           GY  SG    A     ++  +G   D +S + LING  R+E + +A  +   M  + +VP
Sbjct: 305 GYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVP 364

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFH 473
           DVI+Y+ +++ +C+   MH++ L    M+E+GL+ D   YT L+NG+     L+EA    
Sbjct: 365 DVISYSKLISAYCQTRDMHNARLWFHDMVERGLS-DVIVYTVLMNGYCKVGRLQEACELF 423

Query: 474 DEMLQRGFVPD 484
            +M+  G  PD
Sbjct: 424 VQMINLGIKPD 434



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 225/429 (52%), Gaps = 27/429 (6%)

Query: 25  GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRA 84
           GV+ D V YN  ++AYC+ G + EA +L+N M    L P    Y  LING C KG  + A
Sbjct: 151 GVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENA 210

Query: 85  KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
            +V +EML+  + PD  TYN L     R   + +  +I   M  +G+ P+ +++   I  
Sbjct: 211 WQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAG 270

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           F R G L  A + F  ++  G+   NVLY  ++ GY  +G+   A  +   + ++G ++D
Sbjct: 271 FCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVD 330

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
            ++ + ++NGLCR + + EA  +   MLE+ V PD  +++ LI  +C+  +M+ A   F 
Sbjct: 331 RLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFH 390

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M ++ +  D++ Y  L++G+CKVG +++A +L+  MI+  I P+ ++Y +L++G     
Sbjct: 391 DMVERGL-SDVIVYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDG----- 444

Query: 325 HVTEAFRLWYEMVGKG---------------------IKPTLVSCNTIIKGYCRSGDASK 363
           H+ E  +  ++ + K                      I+P +     +I G C++    +
Sbjct: 445 HLKETLQQGWQGIAKERRTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEE 504

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A     +M+++G+ PD  +Y  LING+  +  + KA  L  +M  +G+ PDV++++V+  
Sbjct: 505 ARGLFDEMLAKGLIPDVHTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPDVLSFSVLHK 564

Query: 424 GFCRQGRMH 432
              R  + H
Sbjct: 565 RTLRHEKAH 573



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 230/450 (51%), Gaps = 7/450 (1%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQL------MNSMSGKGLKPGVFTYNSLING 74
           M + GV  D   +++ I   C  G  + A+ +      +  +S + +      YN +I+G
Sbjct: 1   MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 60

Query: 75  LCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPD 134
           LCK+ +   A++VL+   + G +PD  +Y+ L+   C+  N+ +A     +M   G+  +
Sbjct: 61  LCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEIN 120

Query: 135 IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRD 194
               + L+    + G +   +++F++ +  G+  D VLY I ++ YC+ G + EA+K+ +
Sbjct: 121 CYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLN 180

Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
           EM+    V D + Y  ++NG C       A  +F EML+  + PD  T+  L  G+ ++G
Sbjct: 181 EMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNG 240

Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
            + K  ++ + M  + ++P+ +TY   I GFC+ G + +A  L+  +  R I    + YG
Sbjct: 241 LVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYG 300

Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
            ++ GY   G    A+ L+  +  +G     +SC+ +I G CR     +A      M+ +
Sbjct: 301 SMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEK 360

Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
            V PD ISY+ LI+ + +  +M  A      M  +GL  DVI Y V++ G+C+ GR+ ++
Sbjct: 361 NVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGL-SDVIVYTVLMNGYCKVGRLQEA 419

Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
             +  +MI  G+ PD   YT L++GH+ + 
Sbjct: 420 CELFVQMINLGIKPDVVAYTVLLDGHLKET 449


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 233/441 (52%), Gaps = 19/441 (4%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEV-LDEMLQM-GLSPDTATYNTLLVESCRKENMSEAE 120
           P +  +N ++  L K    +    + L   LQ+  ++P   T+NT++   C    M  A 
Sbjct: 44  PSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAF 103

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  ++ + G  PD ++ +TLI     NG++  AL +   + + G   + V Y I+ING 
Sbjct: 104 SVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGL 163

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G    AL++  ++  K    +VV Y+TI++ LC+ K++TEA +L+++M+ + V PD 
Sbjct: 164 CKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDV 223

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF+ LI+G C  G   +A  LF  M   +I PD+ T+N L+D  CK G  ++   + A 
Sbjct: 224 VTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAV 283

Query: 301 MIS-----------------RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
           M+                  R+++P+  SY I+I   C +  V EA  L+ EM  KGI P
Sbjct: 284 MMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITP 343

Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
             V+ +++I G C+S   S A E L +M + G   D I+Y + ++   +   +DKA ALV
Sbjct: 344 DKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALV 403

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
            K+++QG+ P++ TYN+++ G C++GR  ++++I   ++ KG      TY  +ING   +
Sbjct: 404 KKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLE 463

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
               EA    ++M   G  PD
Sbjct: 464 GLFDEAMTLLEKMEDNGCTPD 484



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 225/446 (50%), Gaps = 18/446 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   ++D A   L ++ + G +PDT+T  TLI   C  G + EA    + +  +G
Sbjct: 89  VINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARG 148

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +    +Y  LINGLCK G    A +VL ++    ++ +   Y+T++   C+++ ++EA 
Sbjct: 149 FRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAY 208

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++ +M  + V+PD+V+FS LI  F   GQ   A   F EM    + PD   + I+++  
Sbjct: 209 ELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDAL 268

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G   E                  T N +   +     + +A  +FN + +R V PD 
Sbjct: 269 CKEGSTKE------------------TKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDV 310

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +++T +I   CK   +++AL+LF+ M  K I PD VTY++LIDG CK   +  A +L   
Sbjct: 311 HSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQ 370

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M +R    + I+Y   ++  C    V +A  L  ++  +GI+P + + N +I G C+ G 
Sbjct: 371 MHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGR 430

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A      ++ +G      +YN +ING   E   D+A  L+ KME+ G  PDV+TY  
Sbjct: 431 FENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYET 490

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
           I+    +    H +E +L  MI +GL
Sbjct: 491 IIRALFKNDENHKAEKLLREMIARGL 516



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 152/318 (47%), Gaps = 19/318 (5%)

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKM--LTEADDLFNEMLERGVFPDFYTF 243
           V +A+     ML       ++ +N IL  L ++       A  L++ +    + P   TF
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            T+I+ +C  G M+ A ++   + +    PD +T  TLI G C  G++ +A      +I+
Sbjct: 87  NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIA 146

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R    N +SYGILING C MG    A ++  ++ GK +   +V  +TII   C+    ++
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTE 206

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E  S+M+ + V PD ++++ LI GF       +AF L  +M    + PDV T+N+++ 
Sbjct: 207 AYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266

Query: 424 GFCRQGRMHDSELILWRMI-----------------EKGLNPDRSTYTTLINGHVSQNNL 466
             C++G   +++ +L  M+                 ++ + PD  +YT +I        +
Sbjct: 267 ALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMV 326

Query: 467 KEAFRFHDEMLQRGFVPD 484
            EA    +EM  +G  PD
Sbjct: 327 DEALSLFNEMRCKGITPD 344



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 131/256 (51%), Gaps = 17/256 (6%)

Query: 1   MVNALCKD-----------------HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCRE 43
           +V+ALCK+                 ++++ AK     + ++ V PD  +Y  +I   C+ 
Sbjct: 264 LVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKI 323

Query: 44  GFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY 103
             ++EA  L N M  KG+ P   TY+SLI+GLCK  R   A E+LD+M   G   D  TY
Sbjct: 324 KMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITY 383

Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
            + L   C+   + +A  +  ++  +G+ P+I +++ LI    + G+ + A + F+++  
Sbjct: 384 TSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLI 443

Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
            G       Y I+ING C  G   EA+ + ++M + GC  DVVTY TI+  L +     +
Sbjct: 444 KGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHK 503

Query: 224 ADDLFNEMLERGVFPD 239
           A+ L  EM+ RG+  +
Sbjct: 504 AEKLLREMIARGLLEE 519


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 251/486 (51%), Gaps = 5/486 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL +++ + +       M + GV P+  TYN LI A C+   ++ A ++++ MS KG
Sbjct: 75  LLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKG 134

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   ++ ++++G+CK GR + A+  L E +     P  A+YN ++   C +  M E  
Sbjct: 135 CHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVF 189

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM +RG+ P++V+++T++  F +  +L  A      M S G  P+ + +T ++ G+
Sbjct: 190 SVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGF 249

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G V +AL M   M+++G     ++YN ++ GLC    L  A D FN M    + P+ 
Sbjct: 250 FEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNA 309

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TL+ G    G+++ A+ +++ M     KP++V Y  +ID  CK    ++A  L   
Sbjct: 310 TTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDK 369

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     PN +++  LI   C  G V  A  +++ M   G  P   + N ++ G  R G+
Sbjct: 370 MLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 429

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   + +M++ G +   ++YNT+IN   +      A  L+ +M  QG+ PD  T+N 
Sbjct: 430 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNA 489

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+  +C++G++  +  +L +M       +   YT LI+   +Q  L  A  +  +ML  G
Sbjct: 490 IIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 549

Query: 481 FVPDDA 486
             P++A
Sbjct: 550 ICPNEA 555



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 242/457 (52%), Gaps = 5/457 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC++ ++D+A+  L EM +KG +PD V++ T+++  C+ G +EEA   +       
Sbjct: 110 LIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV--- 166

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   +YN++++ LC + R      V++EM+Q GL P+  TY T++   C+   +  A 
Sbjct: 167 --PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMAC 224

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   G  P++++F+ L+  F  +G++  AL  +  M   G  P  + Y ++I G 
Sbjct: 225 AILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGL 284

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  AL   + M     + +  TY+T+++G   A  L  A  ++NEM   G  P+ 
Sbjct: 285 CCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNV 344

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I   CK    ++A +L D M   +  P+ VT+NTLI   C  G + +A  ++  
Sbjct: 345 VVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHG 404

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y  L++G    G+  +AF +  EM+  G + +LV+ NT+I   C+   
Sbjct: 405 MRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCM 464

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   L +M+ +G+ PD+ ++N +I+ + +E  +  A  L+ +M       +V+ Y +
Sbjct: 465 RKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTI 524

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           +++  C QG++ ++ + L +M+ +G+ P+ +T+  L+
Sbjct: 525 LISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 194/397 (48%), Gaps = 41/397 (10%)

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF------------------------RE 160
           EM  RGVA    +    IG F+R G  DRAL  F                        RE
Sbjct: 23  EMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRE 82

Query: 161 ------------MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
                       M+ AG+ P+   Y ++I   C+N  V  A KM DEM  KGC  D V++
Sbjct: 83  NMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSH 142

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
            TI++G+C+   + EA     E +     P   ++  ++H  C +  M +  ++ + M Q
Sbjct: 143 GTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQ 197

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           + ++P++VTY T++D FCK  E+  A  + A M+S   +PN +++  L+ G+   G V +
Sbjct: 198 RGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHD 257

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +W+ MV +G  P+ +S N +I+G C  GD   A +F + M    + P++ +Y+TL++
Sbjct: 258 ALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVD 317

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           GF    ++D A  + ++M++ G  P+V+ Y  ++   C++     +E ++ +M+     P
Sbjct: 318 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP 377

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +  T+ TLI        +  A      M + G  P+D
Sbjct: 378 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 414



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 104/215 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK    D A+  + +M      P+TVT+NTLI   C  G +  A  + + M   G
Sbjct: 350 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN L++GL ++G    A  ++ EML  G      TYNT++   C+      A 
Sbjct: 410 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 469

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G+ PD  +F+ +I  + + G++  A     +M +     + V YTI+I+  
Sbjct: 470 LLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 529

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
           C  G +  A+    +ML +G   +  T+N ++  +
Sbjct: 530 CNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 1/133 (0%)

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV- 412
           G   +GD       L +M   GV     +    I  F R  + D+A     +  + G   
Sbjct: 7   GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P V  YN +L    R+  +     +   M + G++P+  TY  LI      + +  A + 
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 473 HDEMLQRGFVPDD 485
            DEM ++G  PD+
Sbjct: 127 LDEMSRKGCHPDE 139


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 239/464 (51%), Gaps = 1/464 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  +G+ P   TY+ L+ A  R         L+  M   GL+P ++TY   I  L + GR
Sbjct: 218 MISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGR 277

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A  +L  M   G  PD  TY  L+   C    + +A+E++ +M      PD+V++ T
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYIT 337

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  F   G L+    ++ EM++ G  PD V YTI++   C++G V +A  M D M  +G
Sbjct: 338 LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            V ++ TYNT+++GL   + L EA +LFN M   GV P  Y++   I  + K G+  KAL
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           + F+ M ++ I P I   N  +    ++G + +A  ++ D+ +  +SP+ ++Y +++  Y
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCY 517

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G + +A +L  EM+ +G +P ++  N++I    ++G   +A +   ++    + P  
Sbjct: 518 SKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTV 577

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YN LI G  +E  + KA  L   M+  G  P+ +T+N +L   C+   +  +  +  R
Sbjct: 578 VTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCR 637

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M     +PD  TY T+I G + +     AF F+ +M ++   PD
Sbjct: 638 MTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPD 680



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 245/481 (50%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           AL     I  A   L +M Q G   +  +YN LI    + GF +EA ++   M  +GLKP
Sbjct: 166 ALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKP 225

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + TY++L+  L ++       ++L+EM  +GL P+  TY   +    R   + +A  I 
Sbjct: 226 SMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGIL 285

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
             M   G  PD+V+++ LI      G+LD+A   + +M+++   PD V Y  +++ +   
Sbjct: 286 KTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNY 345

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G +    +   EM   G   DVVTY  ++  LC++  + +A D+ + M  RG+ P+ +T+
Sbjct: 346 GDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTY 405

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
            TLI G      +++AL LF+ M    + P   +Y   ID + K+G+ EKA   +  M  
Sbjct: 406 NTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKK 465

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
           R I P+  +    +     MG + EA  ++ ++   G+ P  V+ N ++K Y ++G   K
Sbjct: 466 RGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDK 525

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A + L++M+SEG +PD I  N+LI+   +   +D+A+ +  ++++  L P V+TYN+++T
Sbjct: 526 ATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILIT 585

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
           G  ++G++  +  +   M E G  P+  T+  L++     + +  A +    M      P
Sbjct: 586 GLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSP 645

Query: 484 D 484
           D
Sbjct: 646 D 646



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 243/490 (49%), Gaps = 11/490 (2%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ LCK+  +D A    C M      PD +TYNT+I    +EG    AF   + M  K 
Sbjct: 618  LLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KF 676

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTL----LVESCRKEN 115
            L P   T  +L+ G+ K GR + A +++ E + Q GL      +  L    L+E+  +E 
Sbjct: 677  LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEA 736

Query: 116  MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQ-LDRALMYFREMKSAGLVPDNVLYT 174
            +S AE + C      +  D      LI +  +  + LD   ++ +  KS G  P    Y 
Sbjct: 737  ISFAEGLVCN----SICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYN 792

Query: 175  IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
             +++G         ALK+  EM   GC  ++ TYN +L+   ++K + E  +L+NEML R
Sbjct: 793  CLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCR 852

Query: 235  GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            G  P+  T   +I    K  ++NKAL+L+  +      P   TY  LI G  K G  E+A
Sbjct: 853  GCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEA 912

Query: 295  NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             K++ +M   +  PN   Y ILING+   G+V  A  L+  M+ +GI+P L S   +++ 
Sbjct: 913  MKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVEC 972

Query: 355  YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
               +G    A  +  ++   G+DPD++SYN +ING  +   +++A +L S+M+N+G+ P+
Sbjct: 973  LFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPE 1032

Query: 415  VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            + TYN ++  F   G +  +  +   +   GL P+  TY  LI GH    N   AF    
Sbjct: 1033 LYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFK 1092

Query: 475  EMLQRGFVPD 484
            +M+  G  P+
Sbjct: 1093 KMMIVGCSPN 1102



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 238/485 (49%), Gaps = 2/485 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  L +  +ID A   L  ME +G  PD VTY  LI+A C  G L++A +L   M     
Sbjct: 269 IRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH 328

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP + TY +L++     G  +  K    EM   G +PD  TY  L+   C+   + +A +
Sbjct: 329 KPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFD 388

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +   M  RG+ P++ +++TLI       +LD AL  F  M+S G+ P    Y + I+ Y 
Sbjct: 389 MLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYG 448

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G   +AL   ++M ++G +  +   N  L  L     + EA D+FN++   G+ PD  
Sbjct: 449 KLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSV 508

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  ++  + K G ++KA  L   M  +  +PDI+  N+LID   K G +++A +++  +
Sbjct: 509 TYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL 568

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
              K++P  ++Y ILI G    G + +A  L+  M   G  P  V+ N ++   C++   
Sbjct: 569 KDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAV 628

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A +   +M      PD ++YNT+I G ++E     AF    +M+ + L PD +T   +
Sbjct: 629 DLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTL 687

Query: 422 LTGFCRQGRMHDSELILWRMI-EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           L G  + GR+ D+  I+   + + GL      +  L+   + +  ++EA  F + ++   
Sbjct: 688 LPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNS 747

Query: 481 FVPDD 485
              DD
Sbjct: 748 ICQDD 752



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 236/464 (50%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M+++ +  +  TY T+  A   +G + +A   +  M   G     ++YN LI  L + G 
Sbjct: 148 MQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGF 207

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
           C  A +V   M+  GL P   TY+ L+V   R+ +     ++  EM   G+ P+I +++ 
Sbjct: 208 CKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTI 267

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I +  R G++D A    + M+  G  PD V YT++I+  C  G + +A ++  +M    
Sbjct: 268 CIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS 327

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D+VTY T+++       L      ++EM   G  PD  T+T L+   CK G +++A 
Sbjct: 328 HKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAF 387

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           ++ D+M  + I P++ TYNTLI G   +  +++A +L+ +M S  ++P   SY + I+ Y
Sbjct: 388 DMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYY 447

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G   +A   + +M  +GI P++ +CN  +      G   +A +  + + + G+ PDS
Sbjct: 448 GKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDS 507

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YN ++  + +   +DKA  L+++M ++G  PD+I  N ++    + GR+ ++  +  R
Sbjct: 508 VTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGR 567

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + +  L P   TY  LI G   +  L +A      M + G  P+
Sbjct: 568 LKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPN 611



 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 238/521 (45%), Gaps = 38/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC   K+D AK    +M      PD VTY TL++ +   G LE   +  + M   G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  L+  LCK G+ D+A ++LD M   G+ P+  TYNTL+        + EA 
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+F  M   GVAP   S+   I  + + G  ++AL  F +MK  G++P        +   
Sbjct: 423 ELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSL 482

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + EA  + +++   G   D VTYN ++    +A  + +A  L  EML  G  PD 
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
               +LI    K G +++A  +F  +    + P +VTYN LI G  K G++ KA  L+  
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGS 602

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN +++  L++  C    V  A +++  M      P +++ NTII G  + G 
Sbjct: 603 MKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGR 662

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ----------- 409
           A  A  F  +M  + + PD ++  TL+ G V++  ++ A  +V +  +Q           
Sbjct: 663 AGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWG 721

Query: 410 --------------------GLVPDVITY--NVILT---GFCRQGRMHDSELILWRMIEK 444
                               GLV + I    N+IL      C+Q +  D++ +  +  + 
Sbjct: 722 ELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKS 781

Query: 445 -GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G +P   +Y  L++G +  N  + A +   EM   G  P+
Sbjct: 782 LGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPN 822



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 195/418 (46%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           T N ++  L   GR +    V D M +  ++ +  TY T+      K  + +A     +M
Sbjct: 124 TCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKM 183

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
            + G   +  S++ LI    + G    AL  ++ M S GL P    Y+ ++    R    
Sbjct: 184 RQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDT 243

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
              + + +EM   G   ++ TY   +  L RA  + +A  +   M + G  PD  T+T L
Sbjct: 244 GTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVL 303

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I   C  G ++KA  L+  M   S KPD+VTY TL+  F   G++E   + W++M +   
Sbjct: 304 IDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGY 363

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           +P+ ++Y IL+   C  G V +AF +   M  +GI P L + NT+I G        +A E
Sbjct: 364 APDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALE 423

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
             + M S GV P + SY   I+ + +  + +KA     KM+ +G++P +   N  L    
Sbjct: 424 LFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLA 483

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             GR+ +++ I   +   GL+PD  TY  ++  +     + +A +   EML  G  PD
Sbjct: 484 EMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPD 541



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 187/354 (52%), Gaps = 1/354 (0%)

Query: 36   LINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            LI   C++    +A +L +  +   G  P   +YN L++GL      + A ++  EM   
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 95   GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
            G  P+  TYN LL    + + + E  E++ EM  RG  P+I++ + +I    ++  +++A
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877

Query: 155  LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
            L  + E+ S    P    Y  +I G  + G   EA+K+ +EM +  C  +   YN ++NG
Sbjct: 878  LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937

Query: 215  LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
              +A  +  A DLF  M++ G+ PD  ++T L+      G ++ A++ F+ +    + PD
Sbjct: 938  FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPD 997

Query: 275  IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
             V+YN +I+G  K   +E+A  L+++M +R ISP   +Y  LI  + + G V +A +++ 
Sbjct: 998  TVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFE 1057

Query: 335  EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
            E+   G++P + + N +I+G+ +SG+  +A     KM+  G  P++ ++  L N
Sbjct: 1058 ELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 150/314 (47%)

Query: 173 YTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
           Y  I       G + +A     +M + G V++  +YN ++  L +     EA  ++  M+
Sbjct: 160 YLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMI 219

Query: 233 ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
             G+ P   T++ L+    +  +    ++L + M    ++P+I TY   I    + G ++
Sbjct: 220 SEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRID 279

Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
            A  +   M      P+ ++Y +LI+  C+ G + +A  L+ +M     KP LV+  T++
Sbjct: 280 DAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLM 339

Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
             +   GD      F S+M ++G  PD ++Y  L+    +   +D+AF ++  M  +G+V
Sbjct: 340 SKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIV 399

Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           P++ TYN +++G     R+ ++  +   M   G+ P   +Y   I+ +    + ++A   
Sbjct: 400 PNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDT 459

Query: 473 HDEMLQRGFVPDDA 486
            ++M +RG +P  A
Sbjct: 460 FEKMKKRGIMPSIA 473


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/489 (30%), Positives = 254/489 (51%), Gaps = 7/489 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +VN   K++    A   +C+M    ++P     N+L+ A      L  A+  +  M  +G
Sbjct: 157 LVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQG 216

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L       +  I+G C +G  D   ++L EM  +G+ PD   Y  ++   C+   + EA 
Sbjct: 217 LGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEAT 276

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  +M++ GV  D VS S+++  + + G+ + A+     ++   L P+  ++   I+  
Sbjct: 277 SILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAM---DVLEVFNLSPNIFVFNSFISKL 333

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C +G +L+A K+  +M E G + D  +Y T++ G C+ K ++ A     +ML+RG+ P  
Sbjct: 334 CTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSV 393

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T LI   CK GNM  A  LF  M  + + PD+V+YNTL++G+ K G ++KA +L + 
Sbjct: 394 ATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSM 453

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S  +SP+ ++Y ILI+G    G V EA  +  E+  +G  P +V+   II G+   G+
Sbjct: 454 MRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGN 513

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A      M    ++PD ++ + L+NG+ R   M +A  L  KM + GL  DVI YN 
Sbjct: 514 FEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNS 573

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH----VSQNNLKEAFRFHDEM 476
           ++ GFC  G + D+  ++  MIE G+ P+  T+  L+ G+    V     + AF+    +
Sbjct: 574 LIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCVENPVERAAFKLQQLL 633

Query: 477 LQRGFVPDD 485
           L+ G   +D
Sbjct: 634 LKYGIQAED 642



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 238/454 (52%), Gaps = 3/454 (0%)

Query: 32  TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
            Y  L+N Y +E   + A +L+  M    + P +   NSL+  L +  + + A + L EM
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 92  LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
              GL  + +  +  +   C + N+    ++  EM   G+ PD+V+++ +I    +   L
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
             A     +M   G+  D+V  + +++GYC+ G   EA+ + +         ++  +N+ 
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSF 329

Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
           ++ LC    + +A  +F +M E G+ PD +++TT++ G+CK  +++ AL     M ++ I
Sbjct: 330 ISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGI 389

Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
           +P + TY  LID  CK G ME A  L+  MI+  + P+ +SY  L+NGY   GH+ +AF 
Sbjct: 390 RPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFE 449

Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
           L   M   G+ P LV+ N +I G  + G  ++A + L ++   G  PD +++  +I GF 
Sbjct: 450 LLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFS 509

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
            + N ++AF L   M    L PDV+T + +L G+CR   M ++ ++  +M++ GL  D  
Sbjct: 510 NKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVI 569

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            Y +LI+G  S  N+ +A      M++ G +P++
Sbjct: 570 LYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNN 603



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 11/249 (4%)

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
            +  L++ + K+     AL L   M   +I P I   N+L+    +  ++  A     +M
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            S+ +  N     + I+GYCS G++   ++L  EM   GIKP +V+   +I   C+    
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVR----EENMDKAFALVSKMENQGLVPDVIT 417
            +A   L KM   GV  DS+S +++++G+ +    EE MD        +E   L P++  
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDV-------LEVFNLSPNIFV 325

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           +N  ++  C  G M  +  +   M E GL PD  +YTT++ G+    ++  A ++  +ML
Sbjct: 326 FNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKML 385

Query: 478 QRGFVPDDA 486
           +RG  P  A
Sbjct: 386 KRGIRPSVA 394


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 238/468 (50%), Gaps = 2/468 (0%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
            L EM   G+ PD +TYN++I    +EG  +EA  ++  MS KGL P   +YN  I    
Sbjct: 237 LLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACG 296

Query: 77  KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE-EIFCEMSRRGVAPDI 135
           + GR   A EVL +M   G++PD  +Y+   +++C      E   ++  EM+ RGVAP+ 
Sbjct: 297 RSGRWKEAVEVLRQMESQGVTPDVISYDAA-IKACGGGGQWETSVDLLDEMAGRGVAPNT 355

Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
           + F++ I    + GQ ++A+   RE+ + GL PD   +   I    ++G   EAL++  E
Sbjct: 356 IHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKE 415

Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
           M  K    D ++YN+ +    +      A +L  +M  +G+ P+  +    I    + G 
Sbjct: 416 MPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGR 475

Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
             + L L   M  + + P+++TYN+ I    K G+ EKA  L A M    ++P+ I+Y  
Sbjct: 476 WQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNS 535

Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
            I      G   EA  L  EM G+G+ P ++S    I  Y ++G   +A E L +M ++G
Sbjct: 536 AIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKG 595

Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
           + P+ I+YN++I    R    +KA  L+ +++   + PD+++YN+ ++   ++GR  ++ 
Sbjct: 596 LTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEAL 655

Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            +L  M  +GL PD  +YT+ I    ++   ++A    + M   G  P
Sbjct: 656 DLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSP 703



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 230/463 (49%)

Query: 22  EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC 81
           EQ+GV P+   YN+ I A       E A  L+  M+ + + P   +YNS I    + G+ 
Sbjct: 172 EQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQW 231

Query: 82  DRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTL 141
           +R   +L EM  +GL+PD  TYN+++    ++    EA  +  EMS +G+ P+ +S++  
Sbjct: 232 ERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMA 291

Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
           I    R+G+   A+   R+M+S G+ PD + Y   I      G    ++ + DEM  +G 
Sbjct: 292 IRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGV 351

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             + + +N+ +    +     +A +L  E+   G+ PD  +F + I    K G   +AL 
Sbjct: 352 APNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALE 411

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L   M  K +KPD ++YN+ I+   K G+ E A +L   M ++ ++PN IS  I I    
Sbjct: 412 LLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACG 471

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G   E   L  +M  +G+ P +++ N+ IK   + G   KA + L+KM    + PDSI
Sbjct: 472 ERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSI 531

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +YN+ I    +     +A AL+ +M  QGL PDVI+Y   +  + + G+   +  +L +M
Sbjct: 532 TYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQM 591

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             KGL P+  TY ++I         ++A     E+ +    PD
Sbjct: 592 PTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPD 634



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 238/475 (50%)

Query: 7   KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
           K+ +   A   L EM  KG+ P+T++YN  I A  R G  +EA +++  M  +G+ P V 
Sbjct: 262 KEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVI 321

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
           +Y++ I      G+ + + ++LDEM   G++P+T  +N+ +V   +     +A E+  E+
Sbjct: 322 SYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREV 381

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           +  G+ PD  SF++ I   +++G+   AL   +EM +  L PD + Y   I    + G  
Sbjct: 382 TALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQW 441

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
             AL++R +M  KG   +V++ N  +          E  +L  +M  +G+ P+  T+ + 
Sbjct: 442 EMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSA 501

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           I    K G   KAL+L   M + ++ PD +TYN+ I    K G  ++A  L  +M  + +
Sbjct: 502 IKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGL 561

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
           +P+ ISY   I+ Y   G    A  L  +M  KG+ P +++ N++IK   R G+  KA +
Sbjct: 562 TPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALD 621

Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
            L ++    V PD +SYN  I+   +    ++A  L+ +M  +GL PDVI+Y   +    
Sbjct: 622 LLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACN 681

Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
            +G    +  +L  M   G++P  ++Y+  I         +EA     EM QRG 
Sbjct: 682 AEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGL 736



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 229/456 (50%), Gaps = 1/456 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A  +  +   A   L +ME +GV PD ++Y+  I A    G  E +  L++ M+G+G+
Sbjct: 292 IRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGV 351

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P    +NS I    K G+ ++A E+L E+  +GL+PD  ++N+ +    +     EA E
Sbjct: 352 APNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALE 411

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  EM  + + PD +S+++ I    + GQ + AL   R+M + GL P+ +   I I    
Sbjct: 412 LLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACG 471

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
             G   E L++  +M  +G   +V+TYN+ +    +     +A DL  +M E  + PD  
Sbjct: 472 ERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSI 531

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+ + I    K G   +A+ L   M  + + PD+++Y   ID + K G+ E+A +L   M
Sbjct: 532 TYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQM 591

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            ++ ++PN I+Y  +I      G   +A  L  E+    + P L+S N  I    + G  
Sbjct: 592 PTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRW 651

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
            +A + L +M +EG+ PD ISY + I     E   +KA  L++ M   G+ P   +Y++ 
Sbjct: 652 EEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLA 711

Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           +    + GR  ++  ++  M ++GL+  R+   +LI
Sbjct: 712 IEACGKGGRREEAVCLVREMAQRGLS-HRNISNSLI 746



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 170/352 (48%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + A  K  +   A   L EM  K + PD ++YN+ I A  + G  E A +L   M  KGL
Sbjct: 397 IAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGL 456

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P V + N  I    ++GR     E+L +M   GL+P+  TYN+ +    +     +A +
Sbjct: 457 TPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALD 516

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +  +M    + PD +++++ I   S+ G+   A+   REM   GL PD + YT  I+ Y 
Sbjct: 517 LLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYG 576

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           +NG    A+++  +M  KG   +V+TYN+++    R     +A DL  E+ E  V PD  
Sbjct: 577 KNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLM 636

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           ++   I    K G   +AL+L   M  + + PD+++Y + I      GE EKA  L   M
Sbjct: 637 SYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLM 696

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIK 353
            +  +SP   SY + I      G   EA  L  EM  +G+    +S + I++
Sbjct: 697 GAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVE 748



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 175/381 (45%), Gaps = 6/381 (1%)

Query: 107 LVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAG 165
           L E+       EA  I  EM   GV     S++T I    R GQ ++AL   RE+ +  G
Sbjct: 117 LREAATTGKWREALGILDEMKEGGVV-CAHSYTTAITTCGRQGQWEKALELLREIPEQEG 175

Query: 166 LVPDNVLYTIIINGYCRNGFVLE-ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
           + P+   Y   I   C +G   E A+ +  EM ++  V D ++YN+ +    R       
Sbjct: 176 VSPNVFCYNSAIEA-CGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERV 234

Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
             L  EM   G+ PD  T+ ++I G  K+G   +AL++   M+ K + P+ ++YN  I  
Sbjct: 235 IGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRA 294

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
             + G  ++A ++   M S+ ++P+ ISY   I      G    +  L  EM G+G+ P 
Sbjct: 295 CGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPN 354

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
            +  N+ I    + G   KA E L ++ + G+ PD+ S+N+ I    +     +A  L+ 
Sbjct: 355 TIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLK 414

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQ 463
           +M  + L PD I+YN  +   C +G   +  L L R M  KGL P+  +    I     +
Sbjct: 415 EMPAKRLKPDAISYNSAIEA-CGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGER 473

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
              +E      +M  +G  P+
Sbjct: 474 GRWQEGLELLRQMPAQGLTPN 494



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 6/145 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ A  +  + + A   L E+++  V PD ++YN  I+A  + G  EEA  L+  M  +G
Sbjct: 606 VIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEG 665

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V +Y S I     +G  ++A  +L+ M   G+SP TAT  +L +E+C K      E
Sbjct: 666 LTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSP-TATSYSLAIEACGKGGRR--E 722

Query: 121 EIFC---EMSRRGVAPDIVSFSTLI 142
           E  C   EM++RG++   +S S ++
Sbjct: 723 EAVCLVREMAQRGLSHRNISNSLIV 747


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 158/517 (30%), Positives = 235/517 (45%), Gaps = 38/517 (7%)

Query: 5   LCKDHKIDSAKMFLCEM-EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG-LK 62
           LC+  +++ A     +M E     PD V YNTLI  YC+ G  + A  +   +  +G  K
Sbjct: 99  LCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCK 158

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
           P   ++++L+  LCK  R   A  V  EML  GL  D    NTL+  +CR   + +A  +
Sbjct: 159 PNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRL 218

Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
              M+    A D  ++  L+    R GQ+     +    +  G     V Y  II G+ R
Sbjct: 219 LHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIR 278

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE------------ 230
            G + EA ++ +  + K  V DV TYN +L  LC++K L EA  LF E            
Sbjct: 279 CGRLAEATQLFESTMTKESVPDVFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFT 337

Query: 231 -----------------------MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
                                  M + G  PD   +  LI    K G +++AL L + M 
Sbjct: 338 YSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN 397

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +K I PD  TYN +ID     G  EKA   +  M  RK SP+ ++Y  L+NG   +    
Sbjct: 398 RKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTD 457

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA  L+ EM      P L +  T+I    ++G    A E  +++V  G  P+S  YN LI
Sbjct: 458 EACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALI 517

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
           +GF R   +DK + L   M      PD ITY +++ GF R+G    +  +L  M+ +G  
Sbjct: 518 SGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 577

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           P  +TY  LI        +++A+    EM+ +GF PD
Sbjct: 578 PALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPD 614



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 229/458 (50%), Gaps = 1/458 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LCK  +   A     EM   G+  D    NTLI+  CR G L +A +L++ M+   
Sbjct: 167 LVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHA 226

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                FTY  L+N  C+ G+       ++     G +     YN ++    R   ++EA 
Sbjct: 227 CARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEAT 286

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F     +   PD+ +++ LI +  ++ QL+ AL  F+E +  G+V D   Y+ +++ +
Sbjct: 287 QLFESTMTKESVPDVFTYNLLIAL-CKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAF 345

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   +AL++   M + GC+ D V YN +++ L +   + EA +L  +M  +G+ PD 
Sbjct: 346 GKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 405

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  +I      G   KA + F +M ++   PD+VTYNTL++G  K+   ++A  L+ +
Sbjct: 406 RTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDE 465

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M + K  P+  ++G LI+     G + +A      +V  G  P     N +I G+CRSG 
Sbjct: 466 MQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQ 525

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             K  E    M+     PDSI+Y  L+ GF R  +   A  L+ +M  +G  P + TYNV
Sbjct: 526 VDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNV 585

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
           ++      G++ D+  +   MI KG NPD  TY+ L N
Sbjct: 586 LIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 623



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 228/522 (43%), Gaps = 39/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGV---------------------------------- 26
           MV  +CK  + +     L E+ QKGV                                  
Sbjct: 24  MVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGN 83

Query: 27  --YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDR 83
              PDTV +   ++  C    +E+A  L + M       P V  YN+LI G CK G  DR
Sbjct: 84  FCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDR 143

Query: 84  AKEVLDEMLQMG-LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
           A ++   + Q G   P+  +++TL++  C+    ++A  +F EM   G+  D+   +TLI
Sbjct: 144 ALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLI 203

Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
               R G L +A      M +     D   Y I++N +CR G + E     +     GC 
Sbjct: 204 HCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCA 263

Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
           +  V YN I+ G  R   L EA  LF   + +   PD +T+  LI   CK   + +AL L
Sbjct: 264 LSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTL 322

Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
           F    Q  +  D+ TY+ L+D F K G   KA +++ +M      P+ + Y +LI+    
Sbjct: 323 FQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGK 382

Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
            G V EA  L  +M  KGI P   + N +I      G   KA  F   M      PD ++
Sbjct: 383 QGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVT 442

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
           YNTL+NG  +    D+A  L  +M+    +PD+ T+  ++    + GRM D+     R++
Sbjct: 443 YNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLV 502

Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           + G  P+   Y  LI+G      + + +    +M++    PD
Sbjct: 503 KMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPD 544



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 219/465 (47%), Gaps = 4/465 (0%)

Query: 23  QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
           + G+  D  T   ++   C+ G  E   +L+  +  KG+     T    I    + G  D
Sbjct: 11  KAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLD 70

Query: 83  RAKEVLDEMLQMGL-SPDTATYNTLLVESCRKENMSEAEEIFCEMSRR-GVAPDIVSFST 140
            A  +LD+M +     PDT  +   +   C    + +A  +F +M      APD+V+++T
Sbjct: 71  AAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNT 130

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLV-PDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           LI  + + G  DRAL  FR +K  G   P+ V +  ++   C+     +AL +  EML  
Sbjct: 131 LIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGA 190

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   DV   NT+++  CR  ML +A  L + M       D +T+  L++ HC+ G M++ 
Sbjct: 191 GLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEV 250

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
            +  ++          V YN +I GF + G + +A +L+   ++++  P+  +Y +LI  
Sbjct: 251 ASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-A 309

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
            C    + EA  L+ E    G+   + + + ++  + ++G A+KA E    M   G  PD
Sbjct: 310 LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPD 369

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
           ++ YN LI+   ++  +D+A  L+  M  +G++PD  TYN+++      GR   +     
Sbjct: 370 TVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG 429

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M  +  +PD  TY TL+NG        EA    DEM     +PD
Sbjct: 430 MMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPD 474



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 194/399 (48%), Gaps = 6/399 (1%)

Query: 90  EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
            +L+ GL  D  T   ++ E C+        E+  E+ ++GV    V+ +  I  F R G
Sbjct: 8   HLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAG 67

Query: 150 QLDRALMYFREMKSAGLV-PDNVLYTIIINGYCRNGFVLEALKMRDEMLEK-GCVMDVVT 207
            LD A+    +M+      PD V +T  ++  C    V +A+ + D+M E   C  DVV 
Sbjct: 68  DLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVA 127

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERG-VFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
           YNT++ G C+A     A D+F  + + G   P+  +F TL+   CK      AL +F  M
Sbjct: 128 YNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEM 187

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
               +K D+   NTLI   C++G + +A +L   M +   + +  +YGIL+N +C  G +
Sbjct: 188 LGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQM 247

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE-FLSKMVSEGVDPDSISYNT 385
            E           G   + V+ N II+G+ R G  ++A + F S M  E V PD  +YN 
Sbjct: 248 HEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESV-PDVFTYNL 306

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           LI    + + +++A  L  + E  G+V DV TY+ ++  F + GR   +  + + M + G
Sbjct: 307 LI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAG 365

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             PD   Y  LI+    Q  + EA    ++M ++G +PD
Sbjct: 366 CMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 404



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 155/335 (46%), Gaps = 6/335 (1%)

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           AL  ++ +  AGL  D    T ++   C+ G      ++  E+ +KG  +  VT    + 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 214 GLCRAKMLTEADDLFNEMLERGVF--PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK-S 270
              RA  L  A  + ++M  RG F  PD   FT  +H  C+   + +A+ LFD M +   
Sbjct: 62  AFGRAGDLDAAMGMLDDM-RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCD 120

Query: 271 IKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILINGYCSMGHVTEA 329
             PD+V YNTLI G+CK G+ ++A  ++  +       PN +S+  L+   C M   T+A
Sbjct: 121 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 180

Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
             ++ EM+G G+K  +  CNT+I   CR G   +A   L  M +     D+ +Y  L+N 
Sbjct: 181 LAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNA 240

Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
             R   M +  + +    + G     + YN I+ GF R GR+ ++  +    + K   PD
Sbjct: 241 HCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPD 300

Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             TY  LI        L+EA     E  Q G V D
Sbjct: 301 VFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLD 334



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 76/148 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  +++ A      + + G  P++  YN LI+ +CR G +++ ++L   M    
Sbjct: 481 LIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 540

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TY  L+ G  ++G    A E+L EM++ G +P  ATYN L+        + +A 
Sbjct: 541 CFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAY 600

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            +F EM  +G  PD+ ++S L  + + N
Sbjct: 601 TLFKEMIAKGFNPDMQTYSALPNLSTPN 628


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 251/486 (51%), Gaps = 5/486 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL +++ + +       M + GV P+  TYN LI A C+   ++ A ++++ MS KG
Sbjct: 128 LLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKG 187

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   ++ ++++G+CK GR + A+  L E +     P  A+YN ++   C +  M E  
Sbjct: 188 CHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVF 242

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM +RG+ P++V+++T++  F +  +L  A      M S G  P+ + +T ++ G+
Sbjct: 243 SVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGF 302

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
             +G V +AL M   M+++G     ++YN ++ GLC    L  A D FN M    + P+ 
Sbjct: 303 FEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNA 362

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T++TL+ G    G+++ A+ +++ M     KP++V Y  +ID  CK    ++A  L   
Sbjct: 363 TTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDK 422

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     PN +++  LI   C  G V  A  +++ M   G  P   + N ++ G  R G+
Sbjct: 423 MLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 482

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   + +M++ G +   ++YNT+IN   +      A  L+ +M  QG+ PD  T+N 
Sbjct: 483 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNA 542

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           I+  +C++G++  +  +L +M       +   YT LI+   +Q  L  A  +  +ML  G
Sbjct: 543 IIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 602

Query: 481 FVPDDA 486
             P++A
Sbjct: 603 ICPNEA 608



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 242/457 (52%), Gaps = 5/457 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALC++ ++D+A+  L EM +KG +PD V++ T+++  C+ G +EEA   +       
Sbjct: 163 LIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV--- 219

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   +YN++++ LC + R      V++EM+Q GL P+  TY T++   C+   +  A 
Sbjct: 220 --PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMAC 277

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I   M   G  P++++F+ L+  F  +G++  AL  +  M   G  P  + Y ++I G 
Sbjct: 278 AILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGL 337

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G +  AL   + M     + +  TY+T+++G   A  L  A  ++NEM   G  P+ 
Sbjct: 338 CCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNV 397

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T +I   CK    ++A +L D M   +  P+ VT+NTLI   C  G + +A  ++  
Sbjct: 398 VVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHG 457

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      PN  +Y  L++G    G+  +AF +  EM+  G + +LV+ NT+I   C+   
Sbjct: 458 MRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCM 517

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   L +M+ +G+ PD+ ++N +I+ + +E  +  A  L+ +M       +V+ Y +
Sbjct: 518 RKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTI 577

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
           +++  C QG++ ++ + L +M+ +G+ P+ +T+  L+
Sbjct: 578 LISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 194/397 (48%), Gaps = 41/397 (10%)

Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF------------------------RE 160
           EM  RGVA    +    IG F+R G  DRAL  F                        RE
Sbjct: 76  EMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRE 135

Query: 161 ------------MKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
                       M+ AG+ P+   Y ++I   C+N  V  A KM DEM  KGC  D V++
Sbjct: 136 NMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSH 195

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
            TI++G+C+   + EA     E +     P   ++  ++H  C +  M +  ++ + M Q
Sbjct: 196 GTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQ 250

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           + ++P++VTY T++D FCK  E+  A  + A M+S   +PN +++  L+ G+   G V +
Sbjct: 251 RGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHD 310

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  +W+ MV +G  P+ +S N +I+G C  GD   A +F + M    + P++ +Y+TL++
Sbjct: 311 ALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVD 370

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           GF    ++D A  + ++M++ G  P+V+ Y  ++   C++     +E ++ +M+     P
Sbjct: 371 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP 430

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +  T+ TLI        +  A      M + G  P+D
Sbjct: 431 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 467



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 104/215 (48%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ LCK    D A+  + +M      P+TVT+NTLI   C  G +  A  + + M   G
Sbjct: 403 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P   TYN L++GL ++G    A  ++ EML  G      TYNT++   C+      A 
Sbjct: 463 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 522

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M  +G+ PD  +F+ +I  + + G++  A     +M +     + V YTI+I+  
Sbjct: 523 LLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 582

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
           C  G +  A+    +ML +G   +  T+N ++  +
Sbjct: 583 CNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 1/135 (0%)

Query: 352 IKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGL 411
           ++    +GD       L +M   GV     +    I  F R  + D+A     +  + G 
Sbjct: 58  VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGC 117

Query: 412 V-PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
             P V  YN +L    R+  +     +   M + G++P+  TY  LI      + +  A 
Sbjct: 118 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 177

Query: 471 RFHDEMLQRGFVPDD 485
           +  DEM ++G  PD+
Sbjct: 178 KMLDEMSRKGCHPDE 192


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/426 (32%), Positives = 234/426 (54%), Gaps = 20/426 (4%)

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           +P  F+ N+L+  L +  R D A+      L+  +SPD  T+N ++   C+   + +A +
Sbjct: 150 RPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGD 209

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIF---SRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           +  +M   G+ P +V+++TLI  +    R G++    M  +EM  AG+ P+ V + ++IN
Sbjct: 210 VAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLIN 269

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
           GYC+   +  A+K+ +EM + G   ++VTY ++++GLCR   + ++  L  EM E G   
Sbjct: 270 GYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELG-LA 328

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
              T  ++++G CK G M +A    D M QK +KP++VTYNTLIDG+ ++G+M++A    
Sbjct: 329 TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAK 388

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M  + ISP+  +Y  LI G+ +         L  EM   G+K  LV+ N +I   C  
Sbjct: 389 GAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCK 448

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  KA + L +MV  G++P   +YN +INGF  + +   A  +  +ME      +V+T 
Sbjct: 449 GEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTC 508

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           NV L  FC+ G+M ++ ++L  M+EKGL P+R TY  + +G                M++
Sbjct: 509 NVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG----------------MIE 552

Query: 479 RGFVPD 484
           +G+VPD
Sbjct: 553 KGYVPD 558



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/421 (31%), Positives = 222/421 (52%), Gaps = 20/421 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL +  ++D A+       ++ V PD  T+N +I+  C+ G L +A  +   M G G
Sbjct: 159 LLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWG 218

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEV---LDEMLQMGLSPDTATYNTLLVESCRKENMS 117
           L P V TYN+LI+G  K GR  +   V   L EM Q G+SP+  T+N L+   C++ N++
Sbjct: 219 LMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNIT 278

Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            A ++F EM + G+  ++V++++L+    R G+++ ++    EM+  GL     L + ++
Sbjct: 279 AAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLPTLNS-VL 337

Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
           NG+C+ G ++EA    D M +KG   +VVTYNT+++G  R   + EA      M  +G+ 
Sbjct: 338 NGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGIS 397

Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
           PD  T+  LI G     +      L D M +  +K D+VTYN LI   C  GE+ KA KL
Sbjct: 398 PDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKL 457

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
             +M+   + P + +Y  +ING+C  G    A  +   M     +  +V+CN  +K +C+
Sbjct: 458 LDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCK 517

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G   +A+  L++M+ +G+ P+ I+Y  + +G +                 +G VPD+  
Sbjct: 518 MGKMDEANVVLNEMLEKGLVPNRITYEIINSGMI----------------EKGYVPDIRG 561

Query: 418 Y 418
           Y
Sbjct: 562 Y 562



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 230/440 (52%), Gaps = 20/440 (4%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P   + N L+ A  R   ++ A +   +   + + P  FT+N +I+GLCK G+  +A +V
Sbjct: 151 PSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDV 210

Query: 88  LDEMLQMGLSPDTATYNTLL---VESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
             +M   GL P   TYNTL+    +  R   M   + +  EM++ G++P++V+F+ LI  
Sbjct: 211 AKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLING 270

Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
           + +   +  A+  F EM+  G+  + V YT +++G CR G V +++K+ +EM E G +  
Sbjct: 271 YCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELG-LAT 329

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
           + T N++LNG C+  M+ EA+   + M ++G+ P+  T+ TLI G+ + G M +A     
Sbjct: 330 LPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKG 389

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            M  K I PD+ TYN LI GF    +    + L  +M    +  + ++Y +LI   C  G
Sbjct: 390 AMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKG 449

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
            V +A +L  EMV  G++P   + N II G+C  GDA  A +   +M       + ++ N
Sbjct: 450 EVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCN 509

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             +  F +   MD+A  ++++M  +GLVP+ ITY +I +G                MIEK
Sbjct: 510 VFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG----------------MIEK 553

Query: 445 GLNPDRSTYTTLINGHVSQN 464
           G  PD   Y   ++ +++ +
Sbjct: 554 GYVPDIRGYAADVSKNLTSS 573



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 152/301 (50%), Gaps = 1/301 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  CK+  I +A     EM Q G+  + VTY +L++  CREG +E++ +L+  M   G
Sbjct: 267 LINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELG 326

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   + T NS++NG CKKG    A+  +D M Q G+ P+  TYNTL+    R   M EA 
Sbjct: 327 LAT-LPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEAT 385

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                M+ +G++PD+ +++ LI  F+ +           EMK  G+  D V Y ++I   
Sbjct: 386 AAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGAL 445

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G V +A+K+ DEM+E G      TYN I+NG C       A D+   M +     + 
Sbjct: 446 CCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANV 505

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T    +   CK G M++A  + + M +K + P+ +TY  +  G  + G +       AD
Sbjct: 506 VTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDIRGYAAD 565

Query: 301 M 301
           +
Sbjct: 566 V 566


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 238/457 (52%), Gaps = 1/457 (0%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            MV    +  K+  A   + +M  +G+   T   N +I        +E A  + + MS +G
Sbjct: 767  MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            + P   TY  +I G C+ G    A   + EM++ G   D AT   ++   C K  ++ A 
Sbjct: 827  VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
              F ++++ G++P+++++S++I    + G + +A     EM   G  P+   +T +I+G 
Sbjct: 887  WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 946

Query: 181  CRNGFVLEALKMRDEMLEKGCVM-DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            C+ G+   A ++  +++       +V TY  +++G C+ + L+ A+ LF  M E+G+ P+
Sbjct: 947  CKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPN 1006

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              T+TTLI GHCK GN +KA  L ++M+ +   P+  TYN+++DG CK G  E+A KL  
Sbjct: 1007 TNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 1066

Query: 300  DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                 +I  + ++Y ILI+  C    + +A     +M   G +P +    T+I  +CR  
Sbjct: 1067 TGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQN 1126

Query: 360  DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
                +++   +++  G+ P   +Y ++I G+ RE+ +  A     KM + G  PD I+Y 
Sbjct: 1127 MMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYG 1186

Query: 420  VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
             +++G C++ R+ ++  +   MI+KGL+P   T  TL
Sbjct: 1187 ALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTL 1223



 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 234/449 (52%), Gaps = 1/449 (0%)

Query: 36   LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
            ++  +   G L+EA  ++  M  +GL       N +I    +    + A  V DEM   G
Sbjct: 767  MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 96   LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
            + PD+ TY  ++V  CR  N+ EA+   CEM  RG   D  + + +I  F     ++RA+
Sbjct: 827  VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886

Query: 156  MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
             +F ++   GL P+ + Y+ +I+G C+ G V +A ++ +EM++ G   +V T+ ++++GL
Sbjct: 887  WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 946

Query: 216  CRAKMLTEADDLFNEMLERGVF-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
            C+      A  LF +++    + P+ +T+T +I G+CK+  +++A  LF+ M ++ + P+
Sbjct: 947  CKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPN 1006

Query: 275  IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
              TY TLIDG CK G   KA +L   M +    PN  +Y  +++G C  G   EAF+L  
Sbjct: 1007 TNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 1066

Query: 335  EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
                  I+   V+   +I   C+  D ++A  FL+KM   G  PD   Y TLI  F R+ 
Sbjct: 1067 TGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQN 1126

Query: 395  NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
             M  +  L  ++   GL P   TY  ++ G+CR+ ++  +     +M + G  PD  +Y 
Sbjct: 1127 MMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYG 1186

Query: 455  TLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
             LI+G   ++ L EA + +D M+ +G  P
Sbjct: 1187 ALISGLCKESRLDEARQLYDTMIDKGLSP 1215



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 218/407 (53%), Gaps = 1/407 (0%)

Query: 79   GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
            G+   A +++ +M   GL   T   N +++ +     +  A  +F EMS RGV PD  ++
Sbjct: 775  GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 834

Query: 139  STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
              +I  + RNG +  A  +  EM   G V DN   T+II  +C    V  A+    ++ +
Sbjct: 835  KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894

Query: 199  KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
             G   +++ Y+++++GLC+   + +A +L  EM++ G  P+ YT T+LIHG CK G   +
Sbjct: 895  MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 954

Query: 259  ALNLF-DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            A  LF  ++   + KP++ TY  +I G+CK  ++ +A  L+  M  + + PN  +Y  LI
Sbjct: 955  AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 1014

Query: 318  NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
            +G+C  G+ ++A+ L   M  +G  P   + N+I+ G C+ G A +A + L+      ++
Sbjct: 1015 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 1074

Query: 378  PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
             D ++Y  LI+   +  +M++A   ++KM   G  PD+  Y  ++  FCRQ  M DSE +
Sbjct: 1075 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKL 1134

Query: 438  LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
               +I+ GL P + TYT++I G+  +  +  A +F  +M   G  PD
Sbjct: 1135 FDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 1181



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 222/426 (52%), Gaps = 1/426 (0%)

Query: 20   EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            EM  +GVYPD+ TY  +I  YCR G + EA + +  M  +G      T   +I   C+K 
Sbjct: 821  EMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKS 880

Query: 80   RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +RA     ++ +MGLSP+   Y++++   C++ ++ +A E+  EM + G  P++ + +
Sbjct: 881  LVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHT 940

Query: 140  TLIGIFSRNGQLDRAL-MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
            +LI    + G  +RA  ++ + ++S    P+   YT +I+GYC+   +  A  + + M E
Sbjct: 941  SLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKE 1000

Query: 199  KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
            +G V +  TY T+++G C+A   ++A +L   M   G FP+  T+ +++ G CK G   +
Sbjct: 1001 QGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEE 1060

Query: 259  ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
            A  L +   Q  I+ D VTY  LI   CK  +M +A      M      P+   Y  LI 
Sbjct: 1061 AFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIA 1120

Query: 319  GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
             +C    + ++ +L+ E++  G+ PT  +  ++I GYCR    S A +F  KM   G  P
Sbjct: 1121 AFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAP 1180

Query: 379  DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
            DSISY  LI+G  +E  +D+A  L   M ++GL P  +T   +   +C+      + +IL
Sbjct: 1181 DSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVIL 1240

Query: 439  WRMIEK 444
             R+ +K
Sbjct: 1241 ERLNKK 1246



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 183/341 (53%), Gaps = 4/341 (1%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            M++  CK+ K+  A+M    M+++G+ P+T TY TLI+ +C+ G   +A++LM  MS +G
Sbjct: 978  MISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEG 1037

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P   TYNS+++GLCK+GR + A ++L+   Q  +  D  TY  L+ E C++ +M++A 
Sbjct: 1038 FFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQAL 1097

Query: 121  EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
                +M + G  PDI  ++TLI  F R   +  +   F E+   GL P    YT +I GY
Sbjct: 1098 VFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGY 1157

Query: 181  CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            CR   V  A+K   +M + GC  D ++Y  +++GLC+   L EA  L++ M+++G+ P  
Sbjct: 1158 CREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCE 1217

Query: 241  YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             T  TL + +CK  +   A+ + + + +K     I T +TLI   C   ++  A   +  
Sbjct: 1218 VTRVTLTYEYCKTEDFASAMVILERLNKKLW---IRTVHTLIRKLCCEKKVALAALFFHK 1274

Query: 301  MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
            ++ ++++ + ++     N  C   +         E + KGI
Sbjct: 1275 LLDKEVNVDRVTLAAF-NTACIESNKYALVSDLSERISKGI 1314



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 186/388 (47%), Gaps = 27/388 (6%)

Query: 1    MVNALCKDHKIDSA-KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
            +++ LCK    + A ++FL  +      P+  TY  +I+ YC+E  L  A  L   M  +
Sbjct: 942  LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 1001

Query: 60   GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            GL P   TY +LI+G CK G   +A E+++ M   G  P+T TYN+++   C++    EA
Sbjct: 1002 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 1061

Query: 120  EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
             ++     +  +  D V+++ LI    +   +++AL++  +M   G  PD  LYT +I  
Sbjct: 1062 FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 1121

Query: 180  YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
            +CR   + ++ K+ DE+++ G      TY +++ G CR K ++ A   F +M + G  PD
Sbjct: 1122 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 1181

Query: 240  FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA----- 294
              ++  LI G CK+  +++A  L+D M  K + P  VT  TL   +CK  +   A     
Sbjct: 1182 SISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILE 1241

Query: 295  ---NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI---KPTLVSC 348
                KLW   +             LI   C    V  A   +++++ K +   + TL + 
Sbjct: 1242 RLNKKLWIRTVH-----------TLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAF 1290

Query: 349  NTIIKGYCRSGDASKADEFLSKMVSEGV 376
            NT     C   +       LS+ +S+G+
Sbjct: 1291 NTA----CIESNKYALVSDLSERISKGI 1314



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%)

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           ++  F     + +A  ++  M NQGLV      N I+        +  +  +   M  +G
Sbjct: 767 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           + PD  TY  +I G+    N+ EA R+  EM++RGFV D+A
Sbjct: 827 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNA 867


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 246/468 (52%), Gaps = 15/468 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG---VYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           M+  L ++  +++A+ FL  +E++    V  +   +N+L+  + R G  +E+ ++   M 
Sbjct: 117 MLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMK 176

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-GLSPDTATYNTLLVESCRKENM 116
             G+ P V T+NSL+  L K+GR + AK+V DEML   G++PDT T+N L+   C    +
Sbjct: 177 SHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMV 236

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYT 174
            +   IF ++SR G  PD+V+++TL+    R G++  A    + M  KS  L P+ V YT
Sbjct: 237 DDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYT 296

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I GYC    + +AL + +EM+ +G   + +TYNT++ GLC A+   +  D+       
Sbjct: 297 TLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGD 356

Query: 235 GVF-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           G F PD  TF TL+H HC  GN++ AL +F+ M++  I+PD  TY+ L+   C+ G  EK
Sbjct: 357 GTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEK 416

Query: 294 ANKLWADMISRKI-------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           A  L   ++ RKI        P   +Y  +    C  G   +A + + +++ +G +    
Sbjct: 417 AEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDP-P 475

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           S  T+I G+C+ G      E L  M+ +   PD  +Y +LING +  +    A   + KM
Sbjct: 476 SYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKM 535

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
                 P+  T++ IL     QGR  +S  ++  M++K +  + S  T
Sbjct: 536 LRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFST 583



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 227/460 (49%), Gaps = 18/460 (3%)

Query: 44  GFLEE---AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG---LS 97
           GFL +   A Q  N     G      +Y S++  L +    + A+  L  + +     + 
Sbjct: 87  GFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVK 146

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
            +   +N+L+    R     E+ ++F  M   GV+P +V+F++L+ I  + G+ + A   
Sbjct: 147 LEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKV 206

Query: 158 FREMKSA-GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           + EM S  G+ PD   + I+I G+C NG V +  ++ +++   GC  DVVTYNT+++GLC
Sbjct: 207 YDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLC 266

Query: 217 RAKMLTEADDLFNEMLERGV--FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           RA  +T A ++   M ++ V   P+  T+TTLI G+C    + KAL +F+ M  + +K +
Sbjct: 267 RAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKAN 326

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILINGYCSMGHVTEAFRLW 333
            +TYNTLI G C+  + EK   +          SP+  ++  L++ +C  G++ +A +++
Sbjct: 327 NITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVF 386

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS-------EGVDPDSISYNTL 386
             M    I+P   + + +++  C+ G   KA++ L K++        +G  P   +YN +
Sbjct: 387 ERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPI 446

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
                      KA     ++  +G   D  +Y  ++ G C++G       +L  M+ K  
Sbjct: 447 FKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDF 505

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            PD  TY +LING +  +    A +  ++ML+    P+ +
Sbjct: 506 XPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSS 545



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 220/490 (44%), Gaps = 16/490 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C +  +D       ++ + G  PD VTYNTL++  CR G +  A+ ++  M  K 
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKS 285

Query: 61  --LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
             L P V TY +LI G C K   ++A  V +EM+  GL  +  TYNTL+   C      +
Sbjct: 286 VDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEK 345

Query: 119 AEEIFCEMSRRGV-APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            ++I    +  G  +PD  +F+TL+      G LD AL  F  M    + PD+  Y+ ++
Sbjct: 346 IKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALV 405

Query: 178 NGYCRNGFVLEALKMRDEMLEK-------GCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
              C+ G   +A  + D++LE+       GC   V  YN I   LC      +A+  F +
Sbjct: 406 RSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQ 465

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           ++ RG   D  ++ TLI GHCK+G       L  +M +K   PD  TY +LI+G   + +
Sbjct: 466 LMRRGT-QDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDK 524

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
              A +    M+     PN  ++  ++      G  +E+  L   M+ K I+  L     
Sbjct: 525 PLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTG 584

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR-EENMDKAFALVSKMENQ 409
            ++    +G   KA + +  +  +G    S+    LI       + +  +  L+  +E+ 
Sbjct: 585 CVRLLFGAGMNDKAFQLVHLLYGKGY---SVKMEELIRYLCHCRKVIQGSKLLLFSLESH 641

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
             V D+   N ++   C   ++ ++  + ++++E G++   S    L     +   L+EA
Sbjct: 642 QFV-DMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLKAGGKLEEA 700

Query: 470 FRFHDEMLQR 479
                 M +R
Sbjct: 701 ESVQKRMERR 710



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN--GFVREENMDKAFALVSKMENQGL 411
           G+ R  D SKA +F +     G      SY +++   G  R  N  + F    +  ++G+
Sbjct: 87  GFLR--DTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGI 144

Query: 412 VP-DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           V  +   +N ++  F R G   +S  +   M   G++P   T+ +L+   + +     A 
Sbjct: 145 VKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAK 204

Query: 471 RFHDEMLQRGFVPDDAF 487
           + +DEML    V  D F
Sbjct: 205 KVYDEMLSTYGVTPDTF 221


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 256/521 (49%), Gaps = 36/521 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M+  LCK  ++  A+    +ME +   P    YNT+I  Y   G  E A++L++ +  +G
Sbjct: 293 MIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERG 352

Query: 61  LKPGVF----------------------------------TYNSLINGLCKKGRCDRAKE 86
             P V                                   TYN +I+ LC  G+ + A  
Sbjct: 353 CIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYM 412

Query: 87  VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
           + DEM   GL P+  T N ++   C+ +    A E+F   S+RG  P+ V++ +LI    
Sbjct: 413 IRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLG 472

Query: 147 RNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVV 206
           + G +D A   F  M   G   + V+YT +I  +  +G   +  K+  EM  +GC  D+ 
Sbjct: 473 KKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLT 532

Query: 207 TYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
             NT ++ + +A  + +   +F ++   G  PD  +++ LIHG  K G   +  ++F  M
Sbjct: 533 LLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM 592

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
            Q+    D   YN ++DGFCK G+++KA ++  +M  +++ P   +YG +I+G   +  +
Sbjct: 593 KQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRL 652

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            EA+ L+ E   KGI+  ++  +++I G+ + G   +A   L +M+ +G+ P+  ++N+L
Sbjct: 653 DEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 712

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK-G 445
           ++  V+ E +++A      M+     P+  TY++++ G CR  + ++   + W+ ++K G
Sbjct: 713 MDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK-YNKAFVFWQEMQKQG 771

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           L P+  TYTT+I G     N+ +A    +     G  PD A
Sbjct: 772 LVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAA 812



 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 252/480 (52%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K  K+D A + L E  +K   P++ TYN +I+  C  G +EEA+ + + M   G
Sbjct: 363 ILTCLGKKRKVDEA-LTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAG 421

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P + T N +++ LCK  + + A E+ +   Q G +P++ TY +L+    +K N+ +A 
Sbjct: 422 LFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAY 481

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  M   G   + V +++LI  F  +G+ +     F+EM   G  PD  L    ++  
Sbjct: 482 RLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCV 541

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V +   + +++   G + DV +Y+ +++GL +A    E   +F+ M ++G   D 
Sbjct: 542 FKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDA 601

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  ++ G CK G ++KA  + + M  K + P + TY ++IDG  K+  +++A  L+ +
Sbjct: 602 RAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEE 661

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
             S+ I  N I Y  LI+G+  +G + EA+ +  EM+ KG+ P + + N+++    ++ +
Sbjct: 662 AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEE 721

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            ++A      M      P++ +Y+ LING  R +  +KAF    +M+ QGLVP+V+TY  
Sbjct: 722 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 781

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           ++ G  + G + D+  +  R    G  PD +++  LI G    N   EA+   +E   +G
Sbjct: 782 MIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKG 841



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 240/514 (46%), Gaps = 34/514 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+AL +  ++D A+  +  M +    P    Y  LI A       E A +L+  M   G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            + GV  + +L+  L ++GR + A  ++DE+    L PD   YN  +    +  N+  A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + F E+  +G+ PD VS++++I +  + G+L  A   F +M++   VP    Y  +I GY
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF------------ 228
              G    A K+ D++ E+GC+  VV++N+IL  L + + + EA  LF            
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSS 392

Query: 229 ----------------------NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM 266
                                 +EM   G+FP+  T   ++   CK      A  +F+  
Sbjct: 393 TYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETA 452

Query: 267 TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
           +Q+   P+ VTY +LIDG  K G ++ A +L+ +M+    + N + Y  LI  +   G  
Sbjct: 453 SQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRK 512

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            +  +++ EM  +G +P L   NT +    ++GD  K       +   G  PD  SY+ L
Sbjct: 513 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 572

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           I+G  +     +  ++   M+ QG   D   YN ++ GFC+ G++  +  +L  M  K +
Sbjct: 573 IHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRV 632

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
            P  +TY ++I+G    + L EA+   +E   +G
Sbjct: 633 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKG 666



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 182/344 (52%), Gaps = 1/344 (0%)

Query: 9   HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTY 68
            K D  K+F  EM ++G  PD    NT ++   + G +E+   +   + G G  P V +Y
Sbjct: 511 RKEDGHKIFK-EMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 569

Query: 69  NSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
           + LI+GL K G+      +   M Q G + D   YN ++   C+   + +A E+  EM  
Sbjct: 570 SILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKV 629

Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
           + V P + ++ ++I   ++  +LD A M F E KS G+  + ++Y+ +I+G+ + G + E
Sbjct: 630 KRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 689

Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
           A  + +EM++KG   +V T+N++++ L +A+ + EA   F  M E    P+ YT++ LI+
Sbjct: 690 AYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILIN 749

Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
           G C+    NKA   +  M ++ + P++VTY T+I G  KVG +  A  L+    +   +P
Sbjct: 750 GLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTP 809

Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
           +  S+  LI G        EA+ ++ E   KG +  + +C +++
Sbjct: 810 DAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLL 853



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 151/294 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  +          M+Q+G   D   YN +++ +C+ G L++A++++  M  K 
Sbjct: 572 LIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TY S+I+GL K  R D A  + +E    G+  +   Y++L+    +   + EA 
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY 691

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            I  EM ++G+ P++ ++++L+    +  +++ AL+ F+ MK     P+   Y+I+ING 
Sbjct: 692 LILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 751

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR     +A     EM ++G V +VVTY T++ GL +   +T+A  LF      G  PD 
Sbjct: 752 CRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDA 811

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            +F  LI G        +A ++F+    K  + ++    +L+D   K   +E+A
Sbjct: 812 ASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/139 (20%), Positives = 57/139 (41%)

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           +C  ++    R+     A+  ++ M      P   +Y  LI         ++A  L+ +M
Sbjct: 149 ACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQM 208

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
           +  G    V  +  ++    R+GR+  +  ++  +    L PD   Y   I+      N+
Sbjct: 209 QEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNV 268

Query: 467 KEAFRFHDEMLQRGFVPDD 485
             A++F  E+  +G  PDD
Sbjct: 269 DMAWKFFHELKSQGLKPDD 287


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 247/478 (51%), Gaps = 1/478 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++   K  +   A   L EME  G  P  VTYN+LI+AY R+G L EA +L + M  KG
Sbjct: 329 LLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKG 388

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP VFTY +L++G  K G  + A  +  EM   G  P+  T+N L+     +   +E  
Sbjct: 389 IKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMM 448

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F E+     APDIV+++TL+ +F +NG        F+EMK AG VP+   +  +I+ Y
Sbjct: 449 KVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAY 508

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            R G   +A+ +   MLE G   D+ +YN +L  L R  +  +++ +F EM +    P+ 
Sbjct: 509 SRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNE 568

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +L+H +     + +   L + +     +P  V   TL+    K   + +    + +
Sbjct: 569 LTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEE 628

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  +K SP+  +   +I  Y     V +A  +   M   G  P+L + N+++  + RS +
Sbjct: 629 L-KKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSEN 687

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +++E L +++++G+ PD ISYNT+I  + R   M  A  + S M+  GLVPDVITYN 
Sbjct: 688 FERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNT 747

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
            +  +       D+  ++  MI+ G   +++TY ++++G+   +   +A  F   + Q
Sbjct: 748 FVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQ 805



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 244/495 (49%), Gaps = 36/495 (7%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFL-EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           M+  GV PD  TYNTLI+  CR G L EEA Q+   M   G  P   T+N+L++   K  
Sbjct: 279 MKSSGVAPDDYTYNTLISC-CRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSR 337

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R   A EVL EM   G SP   TYN+L+    R   + EA E+  +M  +G+ PD+ +++
Sbjct: 338 RPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYT 397

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  F + G  + A+  F EM++AG  P+   +  +I  +   G   E +K+ +E+   
Sbjct: 398 TLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEIC 457

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
            C  D+VT+NT+L    +  M +E   +F EM   G  P+  TF TLI  + + G+  +A
Sbjct: 458 NCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQA 517

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + ++  M +  + PD+ +YN ++    + G  E++ K++A+M   +  PN ++Y  L++ 
Sbjct: 518 MAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHA 577

Query: 320 YCSMGHVTEAFRLW----------------------------------YEMVGKGIKPTL 345
           Y +   +     L                                   +E + K   P L
Sbjct: 578 YANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPDL 637

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            + N +I  Y R    +KA+E L+ M   G  P   +YN+L+    R EN +++  ++ +
Sbjct: 638 STLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKE 697

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +  +GL PD+I+YN ++  +CR GRM D+  I   M   GL PD  TY T +  + + + 
Sbjct: 698 ILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSL 757

Query: 466 LKEAFRFHDEMLQRG 480
            ++A      M++ G
Sbjct: 758 FEDAIGVVRYMIKHG 772



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 251/520 (48%), Gaps = 37/520 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  L K+ K+ +A   L  + + G   D   Y +LI AY   G   +A  +   M  +G
Sbjct: 188 IITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEG 247

Query: 61  LKPGVFTYNSLINGLCKKG-RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM-SE 118
            KP + TYN ++N   K G    +   ++  M   G++PD  TYNT L+  CR+ ++  E
Sbjct: 248 CKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNT-LISCCRRGSLYEE 306

Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
           A ++F EM   G +PD V+F+TL+ ++ ++ +   A+   +EM+ +G  P  V Y  +I+
Sbjct: 307 AAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLIS 366

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
            Y R+G + EA++++D+M+EKG   DV TY T+L+G  +A M   A  +F EM   G  P
Sbjct: 367 AYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKP 426

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
           +  TF  LI  H   G   + + +F+ +   +  PDIVT+NTL+  F + G   + + ++
Sbjct: 427 NICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVF 486

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
            +M      P   ++  LI+ Y   G   +A  ++  M+  G+ P L S N ++    R 
Sbjct: 487 KEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARG 546

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK------------- 405
           G   ++++  ++M      P+ ++Y +L++ +   + +++   L  +             
Sbjct: 547 GLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLL 606

Query: 406 -------------MENQGLV--------PDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
                        ME +           PD+ T N ++  + R+  +  +  IL  M E 
Sbjct: 607 KTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNES 666

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           G +P  +TY +L+  H    N + +     E+L +G  PD
Sbjct: 667 GFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPD 706



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 172/348 (49%), Gaps = 3/348 (0%)

Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
           + +I +  + G++  A      ++  G   D   YT +I  Y  NG   +A+ +  +M E
Sbjct: 186 AVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEE 245

Query: 199 KGCVMDVVTYNTILNGLCRAKM-LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM- 256
           +GC   ++TYN ILN   +  M  ++   L + M   GV PD YT+ TLI   C+ G++ 
Sbjct: 246 EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLI-SCCRRGSLY 304

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
            +A  +F+ M      PD VT+NTL+D + K    ++A ++  +M     SP+ ++Y  L
Sbjct: 305 EEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSL 364

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           I+ Y   G + EA  L  +MV KGIKP + +  T++ G+ ++G    A     +M + G 
Sbjct: 365 ISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGC 424

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            P+  ++N LI          +   +  ++E     PD++T+N +L  F + G   +   
Sbjct: 425 KPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSG 484

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +   M   G  P+R T+ TLI+ +    + ++A   +  ML+ G  PD
Sbjct: 485 VFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPD 532



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 3/285 (1%)

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
           V++      I+  L +   ++ A  + N + + G   D Y +T+LI  +  +G    A+ 
Sbjct: 179 VLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVL 238

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVG-EMEKANKLWADMISRKISPNYISYGILINGY 320
           +F  M ++  KP ++TYN +++ + K+G    K + L   M S  ++P+  +Y  LI+  
Sbjct: 239 VFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISC- 297

Query: 321 CSMGHV-TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           C  G +  EA +++ EM   G  P  V+ NT++  Y +S    +A E L +M   G  P 
Sbjct: 298 CRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPS 357

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            ++YN+LI+ + R+  + +A  L  +M  +G+ PDV TY  +L+GF + G    +  I  
Sbjct: 358 IVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFG 417

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            M   G  P+  T+  LI  H ++    E  +  +E+      PD
Sbjct: 418 EMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPD 462


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 137/393 (34%), Positives = 216/393 (54%), Gaps = 5/393 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A  K      A      M Q G+ PDT T+N L+NA+ +   ++  ++L   M  + 
Sbjct: 95  LIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQN 154

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY+ LI+ +CK G  ++A +V  +M   G  P+  TY +++    +  ++ +A 
Sbjct: 155 CSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAF 214

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F EM+  G+    V +++LI    R+G+ D A   FREM S GL PD+V +T ++ G 
Sbjct: 215 FLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGL 274

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G   EA ++  E  + GC +DV  YN +++ LC++K L EA ++F E+ E G+ PD 
Sbjct: 275 GVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDV 334

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YTF  L+ G CK G ++ A  L   M +    PD+  YNTLIDG  K G +E+A +L  +
Sbjct: 335 YTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLE 394

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M S    P+ ++Y  LI+  C  G + +A RL+ E+  KG   T V+ NTI+ G C +G 
Sbjct: 395 MQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANT-VTYNTILNGLCMAGR 453

Query: 361 ASKADEFLSKMVSEGV----DPDSISYNTLING 389
             +A +  + M  E V    DPD ++Y TL+NG
Sbjct: 454 VDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/437 (31%), Positives = 231/437 (52%), Gaps = 6/437 (1%)

Query: 36  LINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG 95
           L   Y   G LE++ + +  M G         YNSLI+   K G   +A  V   M Q G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 96  LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL 155
           L PDT T+N L+    + + +    ++F EM  +  +P+++++S LI    + G +++AL
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 156 MYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
             F +MKS G  P+   YT +I+G  ++G V +A  + +EM  +G V   V YN++++GL
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 216 CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDI 275
            R+     A  LF EML +G+ PD  TFT+L++G    G  ++A  +F          D+
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 276 VTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
             YN LID  CK   +++A +++ ++    + P+  ++  L++G C  G + +AF L  +
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 336 MVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREEN 395
           M   G  P +   NT+I G  +SG   +A + L +M S G +PD ++YNTLI+   +   
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM----IEKGLNPDRS 451
           ++ A  L  ++  +G   + +TYN IL G C  GR+ ++  +   M    ++  ++PD  
Sbjct: 420 IEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFV 478

Query: 452 TYTTLINGHVSQNNLKE 468
           TYTTL+NG   Q  L E
Sbjct: 479 TYTTLLNG-ARQAGLSE 494



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 213/418 (50%), Gaps = 3/418 (0%)

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P +F    L  G    G  +++ E L  M     +   + YN+L+    +     +A 
Sbjct: 52  LQPRIFI--ELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKAL 109

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            ++  M + G+ PD  +F+ L+  F +  ++D     F EM++    P+ + Y+I+I+  
Sbjct: 110 AVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G V +ALK+  +M  +GC  ++ TY ++++GL ++  + +A  LF EM   G+    
Sbjct: 170 CKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATR 229

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             + +LIHG  + G  + A  LF  M  K ++PD VT+ +L+ G    G   +A +++ +
Sbjct: 230 VVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
                 + +   Y +LI+  C    + EA+ ++ E+   G+ P + + N ++ G C+SG 
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGR 349

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A   L  M   G  PD   YNTLI+G  +   +++A  L+ +M++ G  PDV+TYN 
Sbjct: 350 IHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNT 409

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           ++   C+ GR+ D+  +   +  KG   +  TY T++NG      + EA++  + M Q
Sbjct: 410 LIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQ 466



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 197/393 (50%), Gaps = 35/393 (8%)

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           ++RG  P + + +TL+ +     + + A     E++ +  +    ++  +  GY   G +
Sbjct: 11  TQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLL 70

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            ++++    M    C +    YN++++   +A    +A  ++  M + G+ PD YTF  L
Sbjct: 71  EKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVL 130

Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
           ++   K   ++    LF+ M  ++  P+++TY+ LID  CK G +EKA K++ DM SR  
Sbjct: 131 MNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGC 190

Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
            PN  +Y  +I+G    GHV +AF L+ EM  +G+  T V  N++I G  RSG A  A +
Sbjct: 191 RPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAK 250

Query: 367 FLSKMVSEGVDPDSIS-----------------------------------YNTLINGFV 391
              +M+S+G+ PD ++                                   YN LI+   
Sbjct: 251 LFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLC 310

Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
           + + +D+A+ +  ++E  GLVPDV T+N ++ G C+ GR+HD+ ++L  M   G  PD +
Sbjct: 311 KSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVT 370

Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            Y TLI+G      ++EA +   EM   G+ PD
Sbjct: 371 VYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPD 403



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 188/346 (54%)

Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
           ++++LI  F + G   +AL  +R M  +GL PD   + +++N + +   V    K+ +EM
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
             + C  +V+TY+ +++ +C+   + +A  +F +M  RG  P+ +T+T++I G  K G++
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           +KA  LF+ MT + +    V YN+LI G  + G  + A KL+ +M+S+ + P+++++  L
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           + G    G  +EA R++ E    G    +   N +I   C+S    +A E   ++  +G+
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD  ++N L++G  +   +  AF L+  M+  G  PDV  YN ++ G  + GR+ ++  
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
           +L  M   G  PD  TY TLI+       +++A R  +E+  +GF 
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA 436



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 165/301 (54%), Gaps = 5/301 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L K   +D A     EM  +G+    V YN+LI+   R G  + A +L   M  KG
Sbjct: 200 MIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKG 259

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+P   T+ SL+ GL   GR   A+ +  E   +G + D   YN L+   C+ + + EA 
Sbjct: 260 LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAW 319

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EIF E+   G+ PD+ +F+ L+    ++G++  A +   +MK AG  PD  +Y  +I+G 
Sbjct: 320 EIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL 379

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            ++G V EA ++  EM   G   DVVTYNT+++  C+   + +A  LF E+  +G F + 
Sbjct: 380 RKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG-FANT 438

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKS----IKPDIVTYNTLIDGFCKVGEMEKANK 296
            T+ T+++G C  G +++A  LF+ M Q++    I PD VTY TL++G  + G  E AN 
Sbjct: 439 VTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANS 498

Query: 297 L 297
           L
Sbjct: 499 L 499


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 255/475 (53%), Gaps = 13/475 (2%)

Query: 17  FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
           FL  +  +G  P   ++N++++  C+ G ++ A  +++SM   G +P V +YNSLI+G C
Sbjct: 43  FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC 102

Query: 77  KKGRCDRAKEVLDEM-LQMGL--SPDTATYNTLLVESCRKENMSEAEEIFCEMS--RRGV 131
           + G    A  VL+ +    G    PD  ++N+L     +   M   +E+F  M    +  
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK---MKMLDEVFVYMGVMLKCC 159

Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
           +P++V++ST I  F ++G+L  AL  F  MK   L P+ V +T +I+GYC+ G +  A+ 
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219

Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
           +  EM      ++VVTY  +++G C+   +  A+++++ M+E  V P+   +TT+I G  
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279

Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
           + G+ + A+     M  + ++ DI  Y  +I G C  G++++A ++  DM    + P+ +
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
            +  ++N Y   G +  A  ++++++ +G +P +V+ +T+I G  ++G   +A  +    
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC-- 397

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
           + +  D   + Y  LI+   +E +  +   L SK+   GLVPD   Y   + G C+QG +
Sbjct: 398 IEKAND---VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454

Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            D+  +  RM+++GL  D   YTTLI G  S+  + EA +  DEML  G  PD A
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA 509



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 234/472 (49%), Gaps = 34/472 (7%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           + EA Q ++ +      P  FT N  I+ L        + + L  ++  G +P  +++N+
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK-SA 164
           ++   C+   +  AE+I   M R G  PD++S+++LI    RNG +  A +    ++ S 
Sbjct: 62  VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121

Query: 165 GLV--PDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
           G +  PD V +  + NG+ +   + E       ML K C  +VVTY+T ++  C++  L 
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQ 180

Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
            A   F+ M    + P+  TFT LI G+CK G++  A++L+  M +  +  ++VTY  LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240

Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
           DGFCK GEM++A ++++ M+  ++ PN + Y  +I+G+   G    A +   +M+ +G++
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
             + +   II G C +G   +A E +  M    + PD + + T++N + +   M  A  +
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360

Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDS---------------------------- 434
             K+  +G  PDV+  + ++ G  + G++H++                            
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420

Query: 435 --ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             E +  ++ E GL PD+  YT+ I G   Q NL +AF+    M+Q G + D
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 212/388 (54%), Gaps = 5/388 (1%)

Query: 28  PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           P+ VTY+T I+ +C+ G L+ A +  +SM    L P V T+  LI+G CK G  + A  +
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
             EM ++ +S +  TY  L+   C+K  M  AEE++  M    V P+ + ++T+I  F +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G  D A+ +  +M + G+  D   Y +II+G C NG + EA ++ ++M +   V D+V 
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           + T++N   ++  +  A +++++++ERG  PD    +T+I G  K+G +++A+  F I  
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE- 399

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
               K + V Y  LID  CK G+  +  +L++ +    + P+   Y   I G C  G++ 
Sbjct: 400 ----KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           +AF+L   MV +G+   L++  T+I G    G   +A +   +M++ G+ PDS  ++ LI
Sbjct: 456 DAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDV 415
             + +E NM  A  L+  M+ +GLV  V
Sbjct: 516 RAYEKEGNMAAASDLLLDMQRRGLVTAV 543


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 231/464 (49%), Gaps = 21/464 (4%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           +  K   P    +  ++ +  +         L   M   GL   + T + LIN   + G+
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
              +  V   +L+ G   D  T+ TL+   C K  + +A     ++  +G   + VS+ T
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           LI    + GQ   AL + R +    + PD V+Y  II+G C++  V +A  +  EM+ K 
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
               VVTYNT++ GLC    L +A  L ++M+   + P  YTF+ LI   CK+G M +A 
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
           N+F +M ++ +KP+IVTYN+L+DG   V  ++KA  ++  MI                  
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKM---------------- 286

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
                V EA  L+ EM  K I P +V  N++I G C+SG    A +F+ +M   G  PD 
Sbjct: 287 -----VDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDI 341

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +YN+L++   +  ++DKA  L++K+++QG+ P V TYN+++ G C+ GR+ D+E +   
Sbjct: 342 FTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFED 401

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           ++ KG N D  TY  +I G   +    E      +M   G  PD
Sbjct: 402 LLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPD 445



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 225/455 (49%), Gaps = 15/455 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           +ME  G+  + VT + LIN Y + G    +F +  ++  KG      T+ +LI GLC KG
Sbjct: 37  QMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKG 96

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +A    D+++  G   +  +Y TL+   C+      A E    +  + V PD+V ++
Sbjct: 97  EIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYN 156

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           T+I    ++  ++ A   + EM +  + P  V Y  +I G C    + +A+ +  +M+ +
Sbjct: 157 TIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILE 216

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH-----CKDG 254
                V T++ +++  C+   + EA ++F  M++  V P+  T+ +L+ GH      K  
Sbjct: 217 DINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKA 276

Query: 255 N---------MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
                     +++A+NLF+ M  K I PD+V YN+LIDG CK G    A K   +M  R 
Sbjct: 277 KSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRG 336

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+  +Y  L++  C   HV +A  L  ++  +GI+P++ + N +I G C+SG    A+
Sbjct: 337 QPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAE 396

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           +    ++ +G + D  +YN +I GF ++   D+  A+VSKM++ G  PD     +I+   
Sbjct: 397 KVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSL 456

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
             +G  +D       MI +G     +  +T+   H
Sbjct: 457 FDKGE-NDKAGKFREMIVRGKCHREAPASTIRKRH 490



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 194/386 (50%), Gaps = 14/386 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++  LC   +I  A  F  ++  +G   + V+Y TLIN  C+ G    A + +  + GK 
Sbjct: 88  LIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKL 147

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P V  YN++I+GLCK    + A  +  EM+   + P   TYNTL+   C    + +A 
Sbjct: 148 VQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAI 207

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  +M    + P + +FS LI  F + G++  A   F  M    + P+ V Y  +++G+
Sbjct: 208 GLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGH 267

Query: 181 --------CRNGF------VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
                    ++ F      V EA+ + +EM  K    D+V YN++++GLC++     A  
Sbjct: 268 HLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALK 327

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
              EM  RG  PD +T+ +L+   CK+ +++KA+ L   +  + I+P + TYN LI+G C
Sbjct: 328 FIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLC 387

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           K G ++ A K++ D++ +  + +  +Y  +I G+C  G   E   +  +M   G  P   
Sbjct: 388 KSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAK 447

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMV 372
           +C  II+     G+  KA +F   +V
Sbjct: 448 NCEIIIRSLFDKGENDKAGKFREMIV 473



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 189/354 (53%), Gaps = 15/354 (4%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK  +  +A  FL  ++ K V PD V YNT+I+  C++  + +AF L   M  K 
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P V TYN+LI GLC   +   A  +L +M+   ++P   T++ L+   C++  M EA+
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-------------GIFSRNGQL-DRALMYFREMKSAGL 166
            +F  M +  V P+IV++++L+              IF+   ++ D A+  F EM    +
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQI 302

Query: 167 VPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADD 226
            PD V+Y  +I+G C++G    ALK   EM  +G   D+ TYN++L+ LC+   + +A +
Sbjct: 303 YPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIE 362

Query: 227 LFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFC 286
           L  ++ ++G+ P   T+  LI+G CK G +  A  +F+ +  K    D+ TYN +I GFC
Sbjct: 363 LLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFC 422

Query: 287 KVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
           K G  ++   + + M     SP+  +  I+I      G   +A + + EM+ +G
Sbjct: 423 KKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGK-FREMIVRG 475



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 99/191 (51%)

Query: 11  IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
           +D A     EM  K +YPD V YN+LI+  C+ G    A + +  M  +G  P +FTYNS
Sbjct: 287 VDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNS 346

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           L++ LCK    D+A E+L ++   G+ P   TYN L+   C+   + +AE++F ++  +G
Sbjct: 347 LLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKG 406

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
              D+ +++ +I  F + G  D  L    +MK +G  PD     III      G   +A 
Sbjct: 407 YNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAG 466

Query: 191 KMRDEMLEKGC 201
           K R+ ++   C
Sbjct: 467 KFREMIVRGKC 477



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 104/219 (47%)

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
           ++  K+  P I  +  ++    K         L   M    ++ N ++  ILIN Y  +G
Sbjct: 2   LLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLG 61

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
               +F ++  ++ KG     ++  T+IKG C  G+  KA  F  K+V++G   + +SY 
Sbjct: 62  QNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
           TLING  +      A   + +++ + + PDV+ YN I+ G C+   ++D+  + + M+ K
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
            + P   TY TLI G      LK+A     +M+     P
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINP 220


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 244/467 (52%)

Query: 18  LCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
           L +M + G   +  +YN LI+   + GF  EA ++   M  +GLKP + TY++L+  L K
Sbjct: 180 LNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK 239

Query: 78  KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
           K   +    +L EM  +GL P+  T+   +    R   + EA EIF  M   G  PD+V+
Sbjct: 240 KRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVT 299

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           ++ LI      GQL+ A   F +MK+ G  PD V+Y  +++ +   G +    +   +M 
Sbjct: 300 YTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQME 359

Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
             G + DVVT+  +++ LC+A+   EA   F+ M ++G+ P+ +T+ TLI G  + G + 
Sbjct: 360 ADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIE 419

Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
            AL L D M    ++P   TY T ID F K GE  KA + +  M ++ I PN ++    +
Sbjct: 420 DALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASL 479

Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
                MG + EA  ++  +   G+ P  V+ N ++K Y + G   +A   LS+M+  G +
Sbjct: 480 YSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCE 539

Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
           PD I  N+LI+   +   +D+A+ +  +M++  L P V+TYN +L+G  ++GR+  +  +
Sbjct: 540 PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599

Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
              MI K  +P+  ++ TL++     + ++ A +   +M      PD
Sbjct: 600 FESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPD 646



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 250/487 (51%), Gaps = 2/487 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  L +  KID A      M+ +G  PD VTY  LI+A C  G LE A +L   M   G 
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP    Y +L++     G  D  KE   +M   G  PD  T+  L+   C+  +  EA  
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
            F  M ++G+ P++ +++TLI    R G+++ AL     M+S G+ P    Y   I+ + 
Sbjct: 389 TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFG 448

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++G   +A++  ++M  KG V ++V  N  L  L     L EA  +FN + E G+ PD  
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  ++  + K G +++A+NL   M +   +PD++  N+LID   K G +++A +++  M
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
              K+SP  ++Y  L++G    G V +A  L+  M+ K   P  +S NT++  +C++ + 
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A +  SKM      PD ++YNT+I G ++E  ++ AF    +++ + + PD +T   +
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTL 687

Query: 422 LTGFCRQGRMHDSELILWR-MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           L G  + G++ D+  I    M +     +RS +  L+ G + +  + +A  F +E++  G
Sbjct: 688 LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747

Query: 481 FVPDDAF 487
              +D+F
Sbjct: 748 ICREDSF 754



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 235/464 (50%), Gaps = 1/464 (0%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M  +G+ P   TY+ L+ A  ++   E    L+  M   GL+P V+T+   I  L + G+
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGK 277

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
            D A E+   M   G  PD  TY  L+   C    +  A+E+F +M   G  PD V + T
Sbjct: 278 IDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYIT 337

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           L+  F+  G LD    ++ +M++ G +PD V +TI+++  C+     EA    D M ++G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            + ++ TYNT++ GL RA  + +A  L + M   GV P  YT+ T I    K G   KA+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAV 457

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             F+ M  K I P+IV  N  +    ++G + +A  ++  +    ++P+ ++Y +++  Y
Sbjct: 458 ETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCY 517

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
             +G V EA  L  EM+  G +P ++  N++I    ++G   +A +   +M    + P  
Sbjct: 518 SKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 577

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YNTL++G  +E  + KA  L   M  +   P+ I++N +L  FC+   +  +  +  +
Sbjct: 578 VTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSK 637

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M      PD  TY T+I G + +N +  AF F  + L++   PD
Sbjct: 638 MTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPD 680



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 246/485 (50%), Gaps = 2/485 (0%)

Query: 4   ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
           AL K    +   + L EME  G+ P+  T+   I    R G ++EA+++   M  +G  P
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 64  GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
            + TY  LI+ LC  G+ + AKE+  +M   G  PD   Y TLL +     ++   +E +
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
            +M   G  PD+V+F+ L+ +  +    D A   F  M+  G++P+   Y  +I G  R 
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
           G + +ALK+ D M   G      TY T ++   ++    +A + F +M  +G+ P+    
Sbjct: 416 GRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
              ++   + G + +A  +F+ + +  + PD VTYN ++  + KVG++++A  L ++MI 
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535

Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
               P+ I    LI+     G V EA++++  M    + PT+V+ NT++ G  + G   K
Sbjct: 536 NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQK 595

Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
           A E    M+ +   P++IS+NTL++ F + + ++ A  + SKM      PDV+TYN ++ 
Sbjct: 596 AIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF-HDEMLQRGFV 482
           G  ++ +++ +    +  ++K ++PD  T  TL+ G V    + +A     D M Q  F 
Sbjct: 656 GLIKENKVNHA-FWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714

Query: 483 PDDAF 487
            + +F
Sbjct: 715 VNRSF 719



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 230/464 (49%)

Query: 21  MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
           M++K +  D  TY T+  A    G L +   ++N M   G     ++YN LI+ L + G 
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
           C  A EV   M+  GL P   TY+ L+V   +K +      +  EM   G+ P++ +F+ 
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
            I +  R G++D A   FR M   G  PD V YT++I+  C  G +  A ++  +M   G
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D V Y T+L+       L    + +++M   G  PD  TFT L+   CK  + ++A 
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
             FD+M ++ I P++ TYNTLI G  + G +E A KL   M S  + P   +Y   I+ +
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYF 447

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G   +A   + +M  KGI P +V+CN  +      G   +A    + +   G+ PDS
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           ++YN ++  + +   +D+A  L+S+M   G  PDVI  N ++    + GR+ ++  +  R
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDR 567

Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           M +  L+P   TY TL++G   +  +++A    + M+ +   P+
Sbjct: 568 MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPN 611



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 258/555 (46%), Gaps = 71/555 (12%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            ++++L K  ++D A      M+   + P  VTYNTL++   +EG +++A +L  SM  K 
Sbjct: 548  LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK 607

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
              P   ++N+L++  CK    + A ++  +M  M   PD  TYNT++    ++  ++ A 
Sbjct: 608  CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667

Query: 121  EIFCEMSRR------------------GVAPDIVSFST-----------------LIGIF 145
              F ++ +                   G   D +S +                  L+G  
Sbjct: 668  WFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGT 727

Query: 146  SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK------ 199
                ++D+A+++  E+   G+  ++     ++   C++   L A ++ D+  +K      
Sbjct: 728  LVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPT 787

Query: 200  ------------------------------GCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
                                          GC  D  T+N +L    ++  +TE  +L+ 
Sbjct: 788  LASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYK 847

Query: 230  EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
            EM+ R   PD  T+  +I    K  N++KAL+ F  +     +P   TY  LIDG  KVG
Sbjct: 848  EMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVG 907

Query: 290  EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
             +E+A +L+ +M      PN   + ILINGY  +G    A +L+  MV +GI+P L S  
Sbjct: 908  RLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYT 967

Query: 350  TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
             ++   C +G   +A  + +++ S G+DPD I+YN +ING  + + M++A AL ++M N+
Sbjct: 968  ILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR 1027

Query: 410  GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            G+VPD+ TYN ++      G +  ++ +   +   GL PD  TY  LI G+    N + A
Sbjct: 1028 GIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHA 1087

Query: 470  FRFHDEMLQRGFVPD 484
            +  +  M+  G  P+
Sbjct: 1088 YTVYKNMMVDGCNPN 1102



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 247/521 (47%), Gaps = 38/521 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC   ++++AK    +M+  G  PD V Y TL++ +   G L+   +  + M   G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V T+  L++ LCK    D A    D M + G+ P+  TYNTL+    R   + +A 
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++   M   GV P   ++ T I  F ++G+  +A+  F +MK+ G+VP+ V     +   
Sbjct: 423 KLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G + EA  M + + E G   D VTYN ++    +   + EA +L +EM+  G  PD 
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
               +LI    K G +++A  +FD M    + P +VTYNTL+ G  K G ++KA +L+  
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           MI +K SPN IS+  L++ +C    V  A +++ +M     KP +++ NT+I G  +   
Sbjct: 603 MIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL-------VSKMENQGLVP 413
            + A  F  ++  + + PD ++  TL+ G V+   +  A ++       V    N+    
Sbjct: 663 VNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721

Query: 414 D---------------VITYNVILTGFCRQGRM----------HDSELILWRMIEK---- 444
           D               +    ++L G CR+             H  EL  +++ +K    
Sbjct: 722 DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781

Query: 445 -GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G++P  ++Y  LI   +  +  ++A+    +M   G  PD
Sbjct: 782 LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPD 822



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 247/557 (44%), Gaps = 71/557 (12%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK    D A      M ++G+ P+  TYNTLI    R G +E+A +L+++M   G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P  +TY + I+   K G   +A E  ++M   G+ P+    N  L        + EA+
Sbjct: 433 VQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +F  +   G+APD V+++ ++  +S+ GQ+D A+    EM   G  PD ++   +I+  
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V EA +M D M +      VVTYNT+L+GL +   + +A +LF  M+ +   P+ 
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNT 612

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT-------------------- 280
            +F TL+   CK+  +  AL +F  MT    KPD++TYNT                    
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672

Query: 281 --------------LIDGFCKVGEMEKA----------------NKLWADMISRKISPNY 310
                         L+ G  K G++  A                   W D++   +    
Sbjct: 673 LKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAE 732

Query: 311 ISYGIL------INGYCS------------MGHVTE--AFRLWYEMVGK-GIKPTLVSCN 349
           +   I+      +NG C               H  E  A++++ +   K GI PTL S N
Sbjct: 733 MDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYN 792

Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
            +I          KA +    M + G  PD+ ++N L+    +   + + F L  +M ++
Sbjct: 793 CLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR 852

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
              PD ITYN++++   +   +  +    + ++     P   TY  LI+G      L+EA
Sbjct: 853 RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912

Query: 470 FRFHDEMLQRGFVPDDA 486
            R  +EM   G  P+ A
Sbjct: 913 MRLFEEMSDYGCKPNCA 929



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 239/495 (48%), Gaps = 38/495 (7%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++  CK+ +++ A     +M      PD +TYNT+I    +E  +  AF   + +  K 
Sbjct: 618  LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KS 676

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVL-DEMLQMGLSPDTATYNTL----LVES----- 110
            + P   T  +L+ GL K G+   A  +  D M Q+    + + +  L    LVE+     
Sbjct: 677  MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKA 736

Query: 111  --------------------------CRKENMSEAEEIFCEMSRR-GVAPDIVSFSTLIG 143
                                      C+ +    A +IF + +++ G++P + S++ LIG
Sbjct: 737  IIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIG 796

Query: 144  IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
                    ++A   F++MK+ G  PD   + +++  + ++G + E  ++  EM+ + C  
Sbjct: 797  ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP 856

Query: 204  DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
            D +TYN +++ L ++  L +A D F +++     P   T+  LI G  K G + +A+ LF
Sbjct: 857  DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916

Query: 264  DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            + M+    KP+   +N LI+G+ K+G+ E A +L+  M++  I P+  SY IL++  C  
Sbjct: 917  EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLA 976

Query: 324  GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
            G V EA   + E+   G+ P  ++ N II G  +S    +A    ++M + G+ PD  +Y
Sbjct: 977  GRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTY 1036

Query: 384  NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
            N+L+        +++A  +  +++  GL PDV TYN ++ G+        +  +   M+ 
Sbjct: 1037 NSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMV 1096

Query: 444  KGLNPDRSTYTTLIN 458
             G NP+  TY  L N
Sbjct: 1097 DGCNPNIGTYAQLPN 1111



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 209/438 (47%)

Query: 46  LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
           +E+   +   M  K ++  + TY ++   L  +G   +   VL++M + G   +  +YN 
Sbjct: 138 VEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           L+    +     EA E++  M   G+ P + ++S L+    +    +  ++  +EM+  G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
           L P+   +TI I    R G + EA ++   M ++GC  D+VTY  +++ LC A  L  A 
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
           +LF +M   G  PD   + TL+      G+++     +  M      PD+VT+  L+D  
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
           CK  + ++A   +  M  + I PN  +Y  LI G    G + +A +L   M   G++PT 
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTA 437

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
            +  T I  + +SG+  KA E   KM ++G+ P+ ++ N  +        + +A  + + 
Sbjct: 438 YTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNG 497

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           +   GL PD +TYN+++  + + G++ ++  +L  MI  G  PD     +LI+       
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 466 LKEAFRFHDEMLQRGFVP 483
           + EA++  D M      P
Sbjct: 558 VDEAWQMFDRMKDMKLSP 575



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 184/406 (45%), Gaps = 35/406 (8%)

Query: 114 ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLY 173
           + + +   +F  M ++ +  D+ ++ T+    S  G L +      +M+ AG V +   Y
Sbjct: 136 DKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSY 195

Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
             +I+   ++GF  EAL++   M+ +G    + TY+ ++  L + +       L  EM +
Sbjct: 196 NGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMED 255

Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
            G+ P+ YTFT  I    + G +++A  +F  M  +   PD+VTY  LID  C  G++E 
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315

Query: 294 ANKL-----------------------------------WADMISRKISPNYISYGILIN 318
           A +L                                   W+ M +    P+ +++ IL++
Sbjct: 316 AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375

Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
             C      EAF  +  M  +GI P L + NT+I G  R+G    A + L  M S GV P
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQP 435

Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
            + +Y T I+ F +     KA     KM+ +G+VP+++  N  L      GR+ +++ + 
Sbjct: 436 TAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF 495

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
             + E GL PD  TY  ++  +     + EA     EM++ G  PD
Sbjct: 496 NGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 247/496 (49%), Gaps = 12/496 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++  CK   +  A     E++ KG  P   TY  LI+ +C+ G  +   QL+N M+  G
Sbjct: 246 IIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMG 305

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L   V  +NS+I+   K G  D+A E++  M +MG  PD  TYN L+  SC    + EAE
Sbjct: 306 LNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAE 365

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E       R + P+  S++ L+  + + G    A     ++   G  PD V Y   I+G 
Sbjct: 366 EFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGS 425

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
              G +  AL +R++M+EKG   D   YN +++GLC+      A  L +EML+  + PD 
Sbjct: 426 VAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDA 485

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           Y + TL+ G  ++  ++KA  LF+++  K I P +V YN +I G CK G+M  A      
Sbjct: 486 YMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNK 545

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M     +P+  ++  +I+GY     +  A +++ +M+ +  KP +V+  ++I G+C+  D
Sbjct: 546 MKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIAD 605

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S+A++    M S  ++P+ ++Y  LI GF +    +KA +    M     +P+  T++ 
Sbjct: 606 MSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHY 665

Query: 421 ILTGFC---------RQGRMHDSELIL---WRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
           ++ G            +   +D  LIL     MI +G +   +TY ++I        +  
Sbjct: 666 LINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDT 725

Query: 469 AFRFHDEMLQRGFVPD 484
           A     +ML++GF+ D
Sbjct: 726 AQLLQTKMLRKGFLMD 741



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 241/465 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V  LC   K++  +  + +    G  P+ V YN +I+ YC++G L+ A ++   +  KG
Sbjct: 211 VVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKG 270

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P + TY +LI+G CK G+     ++L+EM  MGL+ +   +N+++    +   + +A 
Sbjct: 271 FLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAA 330

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+   M+  G  PDI +++ LI      G++  A  +    K   L+P+   YT +++ Y
Sbjct: 331 EMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAY 390

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G  + A  M  ++ E G   D+V+Y   ++G      +  A  +  +M+E+GVFPD 
Sbjct: 391 CKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDA 450

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +  L+ G CK G    A  L   M   +++PD   Y TL+DGF +  E++KA +L+  
Sbjct: 451 QIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEV 510

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           ++S+ I P  + Y ++I G C  G +T+A     +M      P   + +T+I GY +  D
Sbjct: 511 VMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHD 570

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
              A +   +M+ +   P+ ++Y +LINGF +  +M +A  +   M++  L P+V+TY +
Sbjct: 571 LDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTI 630

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           ++ GF + G+   +      M+     P+ +T+  LING  +  N
Sbjct: 631 LIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITN 675



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 242/492 (49%), Gaps = 6/492 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG------VYPDTVTYNTLINAYCREGFLEEAFQLMN 54
           ++N L K+ K+D A     +M ++G      +  D  +   ++   C  G +EE  +L++
Sbjct: 170 LLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLID 229

Query: 55  SMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE 114
              G G  P V  YN +I+G CKKG   RA  V +E+   G  P   TY  L+   C+  
Sbjct: 230 DRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAG 289

Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYT 174
                +++  EM+  G+  ++  F+++I    + G +D+A    R M   G  PD   Y 
Sbjct: 290 KFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYN 349

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
           I+IN  C  G + EA +  +   E+  + +  +Y  +++  C+      A D+  ++ E 
Sbjct: 350 ILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAET 409

Query: 235 GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
           G  PD  ++   IHG    G ++ AL + + M +K + PD   YN L+ G CK G    A
Sbjct: 410 GDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAA 469

Query: 295 NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             L ++M+   + P+   Y  L++G+     + +A  L+  ++ KGI P +V  N +IKG
Sbjct: 470 KLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKG 529

Query: 355 YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
            C+ G  + A  +++KM      PD  +++T+I+G+V++ ++D A  +  +M  Q   P+
Sbjct: 530 LCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPN 589

Query: 415 VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
           V+ Y  ++ GFC+   M  +E +   M    L P+  TYT LI G       ++A  F +
Sbjct: 590 VVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFE 649

Query: 475 EMLQRGFVPDDA 486
            ML    +P+D 
Sbjct: 650 LMLMNNCLPNDT 661



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 245/477 (51%), Gaps = 7/477 (1%)

Query: 15  KMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-KGLKPGVFTYNSLIN 73
           ++ L +M+ +   P     N++I  Y   GF+++A ++   +       P V   NSL+N
Sbjct: 113 EIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLN 172

Query: 74  GLCKKGRCDRAKEVLDEMLQ----MGLSPDTATYNTLLVES--CRKENMSEAEEIFCEMS 127
            L K G+ D A E+ D+ML+     GL      Y+ ++V    C    + E  ++  +  
Sbjct: 173 CLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRW 232

Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
             G  P++V ++ +I  + + G L RA   F E+K  G +P    Y  +I+G+C+ G   
Sbjct: 233 GNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQ 292

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
              ++ +EM   G  ++V  +N+I++   +  ++ +A ++   M E G  PD  T+  LI
Sbjct: 293 VVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILI 352

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           +  C  G + +A    +   ++++ P+  +Y  L+  +CK G+   A+ +   +      
Sbjct: 353 NFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDK 412

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
           P+ +SYG  I+G  + G +  A  +  +M+ KG+ P     N ++ G C+ G    A   
Sbjct: 413 PDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLL 472

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           LS+M+   + PD+  Y TL++GF+R   +DKA  L   + ++G+ P V+ YNV++ G C+
Sbjct: 473 LSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCK 532

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G+M D+   + +M      PD  T++T+I+G+V Q++L  A +   +M+++ + P+
Sbjct: 533 CGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPN 589



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 223/445 (50%), Gaps = 28/445 (6%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N  C   +I  A+ FL   +++ + P+  +Y  L++AYC++G    A  ++  ++  G
Sbjct: 351 LINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETG 410

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            KP + +Y + I+G    G  D A  V ++M++ G+ PD   YN L+   C+K     A+
Sbjct: 411 DKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAK 470

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +  EM    + PD   ++TL+  F RN +LD+A   F  + S G+ P  V Y ++I G 
Sbjct: 471 LLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGL 530

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A+   ++M       D  T++T+++G  +   L  A  +F +M+++   P+ 
Sbjct: 531 CKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNV 590

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +T+LI+G CK  +M++A  +F  M   +++P++VTY  LI GF K G+ EKA   +  
Sbjct: 591 VAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFEL 650

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M+     PN  ++  LING  ++ + T                 L+  N          D
Sbjct: 651 MLMNNCLPNDTTFHYLINGLTNITNTT----------------LLIEKN-------EEND 687

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            S   +F + M+SEG      +YN++I    +   +D A  L +KM  +G + D + ++ 
Sbjct: 688 RSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSA 747

Query: 421 ILTGFCRQGRMHDSELILWRMIEKG 445
           +L G C+ G+  +     WR I  G
Sbjct: 748 LLHGLCQTGKSKE-----WRNIISG 767


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 257/479 (53%), Gaps = 9/479 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +D+  D     L E++  GV  D+  +  LI+AY + G  E+A +    M    
Sbjct: 98  VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157

Query: 61  LKPGVFTYNSLINGLCKKGRCDR-AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +P VFTYN ++  + ++      A  V +EML+   SP+  T+  L+    +K   S+A
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +++F +M+ RG++P+ V+++ LI    + G  D A   F EM+++G  PD+V +  +++G
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G ++EA ++     + G V+ +  Y+++++GL RA+  T+A +L+  ML++ + PD
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +T LI G  K G +  AL L   M  K I PD   YN +I   C  G +E+   L  
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M   +  P+  ++ ILI   C  G V EA  ++ E+   G  P++ + N +I G C+SG
Sbjct: 398 EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG 457

Query: 360 DASKADEFLSKMVSEGVDPDSI------SYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           +  +A   L KM  E   P S+      S N   +  V   ++ KA+  ++   + G  P
Sbjct: 458 ELKEARLLLHKM--EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSP 515

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           D+++YNV++ GFCR G +  +  +L  +  KGL+PD  TY TLING       +EAF+ 
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 213/420 (50%), Gaps = 14/420 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM +    P+  T+  L++   ++G   +A ++ + M+G+G+ P   TY  LI+GLC++G
Sbjct: 188 EMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRG 247

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             D A+++  EM   G  PD+  +N LL   C+   M EA E+     + G    +  +S
Sbjct: 248 SADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYS 307

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           +LI    R  +  +A   +  M    + PD +LYTI+I G  + G + +ALK+   M  K
Sbjct: 308 SLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK 367

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   D   YN ++  LC   +L E   L  EM E   FPD  T T LI   C++G + +A
Sbjct: 368 GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREA 427

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI-------- 311
             +F  + +    P + T+N LIDG CK GE+++A  L   M   + +  ++        
Sbjct: 428 EEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNR 487

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           S+  ++      G + +A+R        G  P +VS N +I G+CR+GD   A + L+ +
Sbjct: 488 SFDTMVES----GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
             +G+ PDS++YNTLING  R    ++AF L    ++    P V  Y  ++T  CR+ ++
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKV 601



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 233/508 (45%), Gaps = 42/508 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  +   A+    +M  +G+ P+ VTY  LI+  C+ G  ++A +L   M   G
Sbjct: 204 LMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    +N+L++G CK GR   A E+L    + G       Y++L+    R    ++A 
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAF 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++  M ++ + PDI+ ++ LI   S+ G+++ AL     M S G+ PD   Y  +I   
Sbjct: 324 ELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKAL 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + E   ++ EM E     D  T+  ++  +CR  ++ EA+++F E+ + G  P  
Sbjct: 384 CGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSV 443

Query: 241 YTFTTLIHGHCKDGNMNKALNL-----------------------FDIMTQK-SI----- 271
            TF  LI G CK G + +A  L                       FD M +  SI     
Sbjct: 444 ATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYR 503

Query: 272 ----------KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
                      PDIV+YN LI+GFC+ G+++ A KL   +  + +SP+ ++Y  LING  
Sbjct: 504 DLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLH 563

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
            +G   EAF+L+Y        P +    +++   CR      A     K + +    D  
Sbjct: 564 RVGREEEAFKLFYAKDDFRHSPAVY--RSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDE 621

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           + N +   F +E   ++A   + +++ +     +  Y + L G C+ GR H++ ++   +
Sbjct: 622 TANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVL 680

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            EK +     +   LI+G   +  L  A
Sbjct: 681 REKKILVTPPSCVKLIHGLCKREQLDAA 708



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 173/350 (49%), Gaps = 1/350 (0%)

Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
           F  +I + S +   D       E+KS G+  D+  + ++I+ Y + G   +A++    M 
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154

Query: 198 EKGCVMDVVTYNTILNGLCRAKML-TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
           E  C  DV TYN IL  + R ++    A  ++NEML+    P+ YTF  L+ G  K G  
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214

Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
           + A  +FD MT + I P+ VTY  LI G C+ G  + A KL+ +M +    P+ +++  L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274

Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
           ++G+C +G + EAF L       G    L   +++I G  R+   ++A E  + M+ + +
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334

Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
            PD I Y  LI G  +   ++ A  L+S M ++G+ PD   YN ++   C +G + +   
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394

Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           +   M E    PD  T+T LI        ++EA     E+ + G  P  A
Sbjct: 395 LQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVA 444



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 195/450 (43%), Gaps = 43/450 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +  +   A      M +K + PD + Y  LI    + G +E+A +L++SM  KG
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  + YN++I  LC +G  +  + +  EM +    PD  T+  L+   CR   + EAE
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK------------------ 162
           EIF E+ + G +P + +F+ LI    ++G+L  A +   +M+                  
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRS 488

Query: 163 ---------------------SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
                                  G  PD V Y ++ING+CR G +  ALK+ + +  KG 
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             D VTYNT++NGL R     EA  LF    +    P  Y   +L+   C+   +  A N
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYR--SLMTWSCRKRKVLVAFN 606

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L+    +K    D  T N +   F K GE E+A +   ++ +RK       Y I + G C
Sbjct: 607 LWMKYLKKISCLDDETANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLC 665

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G   EA  ++  +  K I  T  SC  +I G C+      A E     +         
Sbjct: 666 QSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPR 725

Query: 382 SYNTLINGFVRE-ENMDKAFALVSKMENQG 410
             N L++  +   E M+    L ++ME  G
Sbjct: 726 VCNYLLSSLLESTEKMEIVSQLTNRMERAG 755


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 215/397 (54%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+ LCK  ++D A+  L +M + GV  + + YN+L++ Y R+       +++  M  +G
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++  V TY  L++ L       + + + +EM    +  D   Y  ++   CR  NM  A 
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  E    GV P+  ++  LI  F + GQ++ A M   +M+  G+  + +++  +I+GY
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR G V +ALK++  M + G  +D+ TYNT+  GLCR   L EA  L + M+E GV P++
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 422

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+TTLI  HCKDG+M +A  LF  M +K   P +VTYN +IDG+ K G + +A +   +
Sbjct: 423 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKE 482

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  +   P+  +Y  L++G+C  G V  A +L+ EM  +G +P +V+   +I G  + G 
Sbjct: 483 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGR 542

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
           +  A +    M+  G+ PD   Y+ L+     +   D
Sbjct: 543 SEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 131/398 (32%), Positives = 221/398 (55%), Gaps = 1/398 (0%)

Query: 71  LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
           +++GLCK GR D A+ +LD+M + G+S +   YN+LL    R+++    +EI   M   G
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
           +   + +++ L+   S    + +    F EMK+  +V D  LYT +IN YCR G +  A 
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302

Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
           K+ DE +  G   +  TY  ++NG C+   +  A+ L  +M  +GV  +   F T+I G+
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362

Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
           C+ G ++ AL +   M +  ++ DI TYNTL  G C+V  +++A  L   MI   + PNY
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 422

Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
           ++Y  LI+ +C  G + EA RL+ EM  KG  P++V+ N +I GY + G   +A+ F  +
Sbjct: 423 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKE 482

Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
           M  +G  PD  +Y +L++G      +D A  L  +M+ +G  P+V+ Y  +++G  ++GR
Sbjct: 483 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGR 542

Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
              +  +   M++ GL PD S Y+ L+ G +  +N K+
Sbjct: 543 SEAAFQLYDDMLKAGLIPDDSLYSALV-GSLHTDNRKD 579



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 195/357 (54%), Gaps = 8/357 (2%)

Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR---NGFVL 187
           V+P  ++ S ++    ++G++D A     +M   G+  + + Y  +++ Y R   +G V 
Sbjct: 175 VSP--LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQ 232

Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
           E L++   M  +G    V TY  +++ L  A+ +++ + LFNEM    V  D Y +T +I
Sbjct: 233 EILEI---MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVI 289

Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
           + +C+ GNM +A  + D      ++P+  TY  LI+GFCK+G+ME A  L ADM  + + 
Sbjct: 290 NAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVG 349

Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
            N I +  +I+GYC  G V +A ++   M   G++  + + NT+  G CR     +A   
Sbjct: 350 LNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTL 409

Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
           L  M+  GV P+ ++Y TLI+   ++ +M +A  L  +M  +G  P V+TYNV++ G+ +
Sbjct: 410 LHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTK 469

Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +G + ++E     M +KG  PD  TY +L++GH     +  A +  +EM QRG  P+
Sbjct: 470 KGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPN 526


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  244 bits (622), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 259/479 (54%), Gaps = 9/479 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +D+  D     L E++  GV  D+  +  LI+AY + G  E+A +    M    
Sbjct: 98  VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFD 157

Query: 61  LKPGVFTYNSLINGLCKKGRCDR-AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
            +P VFTYN ++  + ++      A  V +EML+   SP+  T+  L+    +K   S+A
Sbjct: 158 CRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217

Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
           +++F +M+ RG++P+ V+++ LI    + G  + A   F EMK++G  PD+V +  +++G
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDG 277

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
           +C+ G ++EA ++     + G V+ +  Y+++++GL RA+  T+A +L+  ML+R + PD
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPD 337

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
              +T LI G  K G +  AL L   M  K I PD   YN +I   C  G +E+   L  
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQL 397

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
           +M   +  P+  ++ ILI   C  G V +A  ++ E+   G  P++ + N +I G C+SG
Sbjct: 398 EMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSG 457

Query: 360 DASKADEFLSKMVSEGVDPDSI------SYNTLINGFVREENMDKAFALVSKMENQGLVP 413
           +  +A   L KM  E   P S+      S N   +  V+  ++ KA+  ++   + G  P
Sbjct: 458 ELKEARLLLHKM--EVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSP 515

Query: 414 DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
           D+++YNV++ GFCR+G +  +  +L  +  KGL+PD  TY TLING       +EAF+ 
Sbjct: 516 DIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 210/420 (50%), Gaps = 14/420 (3%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
           EM +    P+  T+  L++   ++G   +A ++ + M+G+G+ P   TY  LI+GLC++G
Sbjct: 188 EMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRG 247

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
             + A+++  EM   G  PD+  +N LL   C+   M EA E+     + G    +  +S
Sbjct: 248 SPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYS 307

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           +LI    R  +  +A   +  M    + PD +LYTI+I G  + G + +ALK+   M  K
Sbjct: 308 SLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSK 367

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   D   YN ++  LC   +L E   L  EM E   FPD  T T LI   C++G + KA
Sbjct: 368 GITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKA 427

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW--------ADMISRKISPNYI 311
             +F  + +    P + T+N LIDG CK GE+++A  L         A +  R       
Sbjct: 428 EEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNR 487

Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
           S+  ++      G + +A++        G  P +VS N +I G+CR GD   A + L+ +
Sbjct: 488 SFDTMVQS----GSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVL 543

Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
             +G+ PDS++YNTLING  R    ++AF L    ++    P V  Y  ++T  CR+ ++
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRRRKL 601



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 235/508 (46%), Gaps = 42/508 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K  +   A+    +M  +G+ P+ VTY  LI+  C+ G  E+A +L   M   G
Sbjct: 204 LMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASG 263

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    +N+L++G CK GR   A E+L    + G       Y++L+    R    ++A 
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAF 323

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E++  M +R + PDI+ ++ LI   S+ G+++ AL   R M S G+ PD   Y  +I   
Sbjct: 324 ELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKAL 383

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C  G + E   ++ EM E     D  T+  ++  +CR  ++ +A+++F E+ + G  P  
Sbjct: 384 CGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSV 443

Query: 241 YTFTTLIHGHCKDGNMNKALNL-----------------------FDIMTQ-----KSIK 272
            TF  LI G CK G + +A  L                       FD M Q     K+ K
Sbjct: 444 ATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYK 503

Query: 273 -----------PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
                      PDIV+YN LI+GFC+ G+++ A KL   +  + +SP+ ++Y  LING  
Sbjct: 504 NLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLH 563

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
            +G   EAF+L+Y        P +    +++   CR      A     K + +    D  
Sbjct: 564 RVGREEEAFKLFYAKDDFRHSPAVY--RSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDE 621

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           + N +   F +E   ++A   + +++ +     +  Y + L G C+ GR H++ ++   +
Sbjct: 622 TANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVL 680

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEA 469
            EK +     +   LI+G   +  L  A
Sbjct: 681 REKKILVTPPSCVKLIHGLCKREQLDAA 708



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 186/398 (46%), Gaps = 3/398 (0%)

Query: 92  LQMGLSPDTATYNTLLVESCRKE--NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
           ++  L P     +  ++ S  KE  N       F   SRR       SF  +I + S + 
Sbjct: 47  IEPALEPLVPFLSKNIITSVIKEEVNRQLGFRFFIWASRRERLRSGESFGLVIDMLSEDN 106

Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
             D       E+KS G+  D+  + ++I+ Y + G   +A++    M E  C  DV TYN
Sbjct: 107 GCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYN 166

Query: 210 TILNGLCRAKML-TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
            IL  + R  +    A  ++NEML+    P+ YTF  L+ G  K G  + A  +FD MT 
Sbjct: 167 VILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTG 226

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
           + I P+ VTY  LI G C+ G  E A KL+ +M +    P+ +++  L++G+C +G + E
Sbjct: 227 RGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVE 286

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           AF L       G    L   +++I G  R+   ++A E  + M+   + PD I Y  LI 
Sbjct: 287 AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQ 346

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
           G  +   ++ A  L+  M ++G+ PD   YN ++   C +G + +   +   M E    P
Sbjct: 347 GLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           D  T+T LI        +++A     E+ + G  P  A
Sbjct: 407 DACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVA 444



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 195/450 (43%), Gaps = 43/450 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L +  +   A      M ++ + PD + Y  LI    + G +E+A +L+ SM  KG
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKG 368

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           + P  + YN++I  LC +G  +  + +  EM +    PD  T+  L+   CR   + +AE
Sbjct: 369 ITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAE 428

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK------------------ 162
           EIF E+ + G +P + +F+ LI    ++G+L  A +   +M+                  
Sbjct: 429 EIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRS 488

Query: 163 ---------------------SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
                                  G  PD V Y ++ING+CR G +  ALK+ + +  KG 
Sbjct: 489 FDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGL 548

Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
             D VTYNT++NGL R     EA  LF    +    P  Y   +L+   C+   +  A N
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYR--SLMTWSCRRRKLLVAFN 606

Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
           L+    +K    D  T N +   F K GE E+A +   ++ +RK       Y I + G C
Sbjct: 607 LWMKYLKKISCLDDETANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLC 665

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G   EA  ++  +  K I  T  SC  +I G C+      A +     +         
Sbjct: 666 QSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVFLYTLDNNFKLMPR 725

Query: 382 SYNTLINGFVR-EENMDKAFALVSKMENQG 410
             N L++  ++  E M+    L ++ME  G
Sbjct: 726 VCNYLLSSLLQSREKMEIVSQLTNRMERAG 755


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  244 bits (622), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 246/468 (52%), Gaps = 15/468 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKG---VYPDTVTYNTLINAYCREGFLEEAFQLMNSMS 57
           M+  L ++  +++A+ FL  +E++    V  +   +N+L+  + R G  +E+ ++   M 
Sbjct: 117 MLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMK 176

Query: 58  GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-GLSPDTATYNTLLVESCRKENM 116
             G+ P V T+NSL+  L K+GR + AK+V DEML   G++PDT T+N L+   C    +
Sbjct: 177 SHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMV 236

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM--KSAGLVPDNVLYT 174
            +   IF ++SR G  PD+V+++TL+    R G++  A    + M  KS  L P+ V YT
Sbjct: 237 DDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYT 296

Query: 175 IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
            +I GYC    + +AL + +EM+ +G   + +TYNT++ GLC A+   +  D+       
Sbjct: 297 TLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGD 356

Query: 235 GVF-PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
           G F PD  TF TL+H HC  GN++ AL +F+ M++  I+PD  TY+ L+   C+ G  EK
Sbjct: 357 GTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEK 416

Query: 294 ANKLWADMISRKI-------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLV 346
           A  L   ++ RKI        P   +Y  +    C  G   +A + + +++ +G +    
Sbjct: 417 AEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDP-P 475

Query: 347 SCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKM 406
           S  T+I G+C+ G      E L  M+ +   PD  +Y +LING +  +    A   + KM
Sbjct: 476 SYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKM 535

Query: 407 ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYT 454
                 P+  T++ IL     QGR  +S  ++  M++K +  + S  T
Sbjct: 536 LRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFST 583



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 227/460 (49%), Gaps = 18/460 (3%)

Query: 44  GFLEE---AFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMG---LS 97
           GFL +   A Q  N     G      +Y S++  L +    + A+  L  + +     + 
Sbjct: 87  GFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVK 146

Query: 98  PDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
            +   +N+L+    R     E+ ++F  M   GV+P +V+F++L+ I  + G+ + A   
Sbjct: 147 LEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKV 206

Query: 158 FREMKSA-GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
           + EM S  G+ PD   + I+I G+C NG V +  ++ +++   GC  DVVTYNT+++GLC
Sbjct: 207 YDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLC 266

Query: 217 RAKMLTEADDLFNEMLERGV--FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
           RA  +T A ++   M ++ V   P+  T+TTLI G+C    + KAL +F+ M  + +K +
Sbjct: 267 RAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKAN 326

Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILINGYCSMGHVTEAFRLW 333
            +TYNTLI G C+  + EK   +          SP+  ++  L++ +C  G++ +A +++
Sbjct: 327 NITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVF 386

Query: 334 YEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVS-------EGVDPDSISYNTL 386
             M    I+P   + + +++  C+ G   KA++ L K++        +G  P   +YN +
Sbjct: 387 ERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPI 446

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
                      KA     ++  +G   D  +Y  ++ G C++G       +L  M+ K  
Sbjct: 447 FKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDF 505

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
            PD  TY +LING +  +    A +  ++ML+    P+ +
Sbjct: 506 LPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSS 545



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 222/493 (45%), Gaps = 26/493 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C +  +D       ++ + G  PD VTYNTL++  CR G +  A+ ++  M  K 
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKS 285

Query: 61  --LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
             L P V TY +LI G C K   ++A  V +EM+  GL  +  TYNTL+   C      +
Sbjct: 286 VDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEK 345

Query: 119 AEEIFCEMSRRGV-APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
            ++I    +  G  +PD  +F+TL+      G LD AL  F  M    + PD+  Y+ ++
Sbjct: 346 IKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALV 405

Query: 178 NGYCRNGFVLEALKMRDEMLEK-------GCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
              C+ G   +A  + D++LE+       GC   V  YN I   LC      +A+  F +
Sbjct: 406 RSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQ 465

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           ++ RG   D  ++ TLI GHCK+G       L  +M +K   PD  TY +LI+G   + +
Sbjct: 466 LMRRGT-QDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDK 524

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
              A +    M+     PN  ++  ++      G  +E+  L   M+ K I+  L     
Sbjct: 525 PLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTG 584

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR-EENMDKAFALVSKMENQ 409
            ++    +G   KA + +  +  +G    S+    LI       + +  +  L+  +E+ 
Sbjct: 585 CVRLLFGAGMNDKAFQLVHLLYGKGY---SVKMEELIRYLCHCRKVIQGSKLLLFSLESH 641

Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
             V D+   N ++   C   ++ ++  + ++++E G++   S           QN LK +
Sbjct: 642 QFV-DMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSC----------QNQLKVS 690

Query: 470 FRFHDEMLQRGFV 482
               +++ +  FV
Sbjct: 691 LEAGEKLEEAEFV 703



 Score = 38.9 bits (89), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 354 GYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN--GFVREENMDKAFALVSKMENQGL 411
           G+ R  D SKA +F +     G      SY +++   G  R  N  + F    +  ++G+
Sbjct: 87  GFLR--DTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGI 144

Query: 412 VP-DVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           V  +   +N ++  F R G   +S  +   M   G++P   T+ +L+   + +     A 
Sbjct: 145 VKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAK 204

Query: 471 RFHDEMLQRGFVPDDAF 487
           + +DEML    V  D F
Sbjct: 205 KVYDEMLSTYGVTPDTF 221


>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800-like [Brachypodium distachyon]
          Length = 821

 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 250/501 (49%), Gaps = 18/501 (3%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ LCK+ +++  +  L    ++G+ PD   Y+ LI +YC+ G L +      +M   G
Sbjct: 301 VMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHG 360

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L+      + L+    K G   +  E   +    GL  D   YN  +   C+  NM EA 
Sbjct: 361 LEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAV 420

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++  EM   G++PD + ++ LI  +   G +  A   F EM  A + PD V Y I+ +G 
Sbjct: 421 KLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGL 480

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G V+E   +   M ++G   + +TY  +++G CR   L+EA+ LFN + E+G+    
Sbjct: 481 SKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIE 540

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
             +++++ G+   G  + A  LF  + ++    D  + + LI   C+ G  + A+ + + 
Sbjct: 541 VLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCST 600

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWY-EMVGKGIKPTLVSCNTIIKGYCRSG 359
           M+ +   P+ ISY  LI+ YC  G +  A RLW+ +MV +G+   ++    ++ GYC+ G
Sbjct: 601 MLEKNDVPDLISYSKLISAYCQTGDMRNA-RLWFHDMVQRGLPVDVIVYTVLMNGYCKIG 659

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD----------------KAFALV 403
              +A E  ++M S G+ PD I+Y  L++G ++E+                   K   L+
Sbjct: 660 LMQEACELFAQMTSLGIKPDIIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLL 719

Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
           S M+   + PDV  Y V++ G C+   +  +  +   M++KGL PD   YT LING+ SQ
Sbjct: 720 SSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQ 779

Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
             + +A     EM+ +G  PD
Sbjct: 780 GEVAKAEDLFQEMVDKGIKPD 800



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 237/464 (51%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +  +L ++ K D A     EM + GV PD   +++ I   C  G ++ A+ ++  +  + 
Sbjct: 231 ITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREK 290

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++     +N +++GLCK+ R +  +++L+  ++ GL+PD   Y+ L+   C+  N+ +  
Sbjct: 291 VQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVL 350

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           + +  M   G+  +    S L+  F++ G   +   YF++ + +GL  D VLY I ++ Y
Sbjct: 351 DHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAY 410

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + EA+K+  EM+  G   D + Y  ++ G C    +  A   F EML+  V PD 
Sbjct: 411 CKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDV 470

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+  L  G  K G + +  +L   M  + ++P+ +TY  +IDGFC+   + +A  L+  
Sbjct: 471 VTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNI 530

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +  + I    + Y  ++ GY   G    A+ L+  +  +G      SC+ +I   CR G+
Sbjct: 531 VEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGN 590

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
           +  A    S M+ +   PD ISY+ LI+ + +  +M  A      M  +GL  DVI Y V
Sbjct: 591 SQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTV 650

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           ++ G+C+ G M ++  +  +M   G+ PD   YT L++GH+ ++
Sbjct: 651 LMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHLKED 694



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 235/456 (51%)

Query: 29  DTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVL 88
           D  +   +  +  +E   ++AF++   M   G+KP V  ++S I GLC+ G+ D A  +L
Sbjct: 224 DAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAIL 283

Query: 89  DEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRN 148
            E+++  +  +   +N ++   C++  + E E++     R+G+ PDI  +S LI  + + 
Sbjct: 284 QEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKV 343

Query: 149 GQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY 208
           G L + L +++ M S GL  +  + + ++  + + G   +  +   +  + G  +D V Y
Sbjct: 344 GNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLY 403

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           N  ++  C+   + EA  L  EM+  G+ PD   +T LI G+C  G++  A   F+ M +
Sbjct: 404 NIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLK 463

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
            ++KPD+VTYN L  G  K G + +   L   M  R + PN ++YG++I+G+C   +++E
Sbjct: 464 ANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSE 523

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A  L+  +  KGI    V  ++++ GY   G    A     ++  +G   D  S + LI+
Sbjct: 524 AEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLIS 583

Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
              R+ N   A  + S M  +  VPD+I+Y+ +++ +C+ G M ++ L    M+++GL  
Sbjct: 584 DLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPV 643

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           D   YT L+NG+     ++EA     +M   G  PD
Sbjct: 644 DVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPD 679



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 215/415 (51%), Gaps = 17/415 (4%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++A CK   +D A   L EM   G+ PD + Y  LI  YC +G ++ A Q    M    +
Sbjct: 407 MDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANV 466

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
           KP V TYN L +GL K+G      +++  M   GL P++ TY  ++   CR +N+SEAE 
Sbjct: 467 KPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEV 526

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +F  +  +G+    V +S+++  +   G  D A + F  +   G + D    + +I+  C
Sbjct: 527 LFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLC 586

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           R+G    A  +   MLEK  V D+++Y+ +++  C+   +  A   F++M++RG+  D  
Sbjct: 587 RDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVI 646

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME--------- 292
            +T L++G+CK G M +A  LF  MT   IKPDI+ Y  L+DG  K              
Sbjct: 647 VYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHLKEDLQRRWQGISRDK 706

Query: 293 -------KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
                  K N+L + M   +I P+   Y +LI+G C   ++ +A  L+ EM+ KG+ P  
Sbjct: 707 RSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDH 766

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
            +   +I GYC  G+ +KA++   +MV +G+ PD ++++ L N  V     D+++
Sbjct: 767 YAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVL-NRRVLRNRQDQSY 820



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 216/463 (46%), Gaps = 47/463 (10%)

Query: 63  PGVFTYNSLINGLCKKGRCDRAKEVLD---EMLQMGLSPDTATYNTLL---VESCRKENM 116
           P +F  N LI        C  A++ +    E+ ++G+ P   T N LL    ESC  E +
Sbjct: 153 PLLFATNCLITACTT---CCDARDTIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEIV 209

Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
             A +   EM    +  D  S   +     +  + D+A   + EM   G+ PD   ++  
Sbjct: 210 LSAYD---EMKFFRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSF 266

Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
           I G C  G +  A  +  E++ +   ++ + +N +++GLC+   L E + L    + +G+
Sbjct: 267 IIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGL 326

Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKP----------------------- 273
            PD Y ++ LI  +CK GN+ K L+ +  M    ++                        
Sbjct: 327 TPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTE 386

Query: 274 ------------DIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
                       D V YN  +D +CK+G M++A KL  +M++  +SP+ I Y  LI GYC
Sbjct: 387 YFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYC 446

Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
             G +  A + + EM+   +KP +V+ N +  G  + G   +  + +  M   G+ P+S+
Sbjct: 447 LKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSL 506

Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
           +Y  +I+GF R +N+ +A  L + +E +G+    + Y+ ++ G+  +G   ++ ++  R+
Sbjct: 507 TYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRV 566

Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            ++G   DR + + LI+      N + A      ML++  VPD
Sbjct: 567 AKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPD 609



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 191/460 (41%), Gaps = 59/460 (12%)

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R + A   L E     LSP     N +    C K   + A   F +    G   D  +++
Sbjct: 49  RLNFAANELAERRSCPLSPA----NVVKTLQCLKRRPAIAFAYFKDAESVGFRHDFSTYA 104

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAG------LVP------------------DNVLYTI 175
            ++ I S +GQ       F E+ S        +VP                   N L T 
Sbjct: 105 EIVHILSHSGQGRMLFSLFCEIVSPTSGGGPEIVPLMDQLKRTCTTSYPLLFATNCLITA 164

Query: 176 ------------IINGYCRNG-------------FVLEA------LKMRDEMLEKGCVMD 204
                       +    CR G             F  E+      L   DEM      +D
Sbjct: 165 CTTCCDARDTIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLD 224

Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
             +   I   L + K   +A  ++ EM+E GV PD +  ++ I G C+ G ++ A  +  
Sbjct: 225 AHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQ 284

Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
            + ++ ++ + + +N ++DG CK   +E+  KL  + + + ++P+   Y  LI  YC +G
Sbjct: 285 EIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVG 344

Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
           ++ +    +  MV  G++      + +++ + + G AS+  E+  K    G+  D + YN
Sbjct: 345 NLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYN 404

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
             ++ + +  NMD+A  L+ +M   GL PD I Y  ++ G+C +G + ++      M++ 
Sbjct: 405 IAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKA 464

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            + PD  TY  L +G   +  + E F     M  RG  P+
Sbjct: 465 NVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPN 504



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 51/201 (25%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++A C+   + +A+++  +M Q+G+  D + Y  L+N YC+ G ++EA +L   M+  G
Sbjct: 616 LISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLG 675

Query: 61  LKPGVFTYNSL------------------------------------------------- 71
           +KP +  Y  L                                                 
Sbjct: 676 IKPDIIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYT 735

Query: 72  --INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
             I+G CK    ++A+ + DEMLQ GL+PD   Y  L+   C +  +++AE++F EM  +
Sbjct: 736 VLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDK 795

Query: 130 GVAPDIVSFSTLIGIFSRNGQ 150
           G+ PD+++FS L     RN Q
Sbjct: 796 GIKPDVLTFSVLNRRVLRNRQ 816


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 242/456 (53%), Gaps = 24/456 (5%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           + P+ +++N +I A C+ GF++ A ++   M  K   P  +TY +L++GLCK+ R D A 
Sbjct: 183 ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAV 242

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +LDEM   G SP    YN L+   C+K ++S   ++   M  +G  P+ V+++TLI   
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGL 302

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+LD+A+     M S+  +P++V Y  +ING  +    ++  ++   M E+G  ++ 
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQ 362

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y+ +++GL +     EA  L+ +M E+G  P+   ++ +I G C++G  N+A  + + 
Sbjct: 363 HIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNG 422

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M      P++ TY++L+ GF K G  E+A ++W +M     S N   Y +LI+G C +G 
Sbjct: 423 MISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGR 482

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE---GVDPDSIS 382
           V EA  +W +M+  GIKP  V+ +++IKG C  G    A +   +M+ +      PD ++
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF------CRQGRMHDSEL 436
           YN L++G   ++++ +A  L++ M ++G  PDVIT N  L         C +GR    EL
Sbjct: 543 YNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEEL 602

Query: 437 ---------------ILWRMIEKGLNPDRSTYTTLI 457
                          I+  M+ K L P  ST+  ++
Sbjct: 603 VARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIV 638



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 240/465 (51%), Gaps = 26/465 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A      M +K   PD  TY TL++  C+E  ++EA  L++ M  +G
Sbjct: 193 VIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    YN LI+GLCKKG   R  +++D M   G  P+  TYNTL+   C K  + +A 
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAV 312

Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
            +   M      P+ V++ TLI G+  +   +D A +    M+  G   +  +Y+++I+G
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLI-SMEERGYRLNQHIYSVLISG 371

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             + G   EA+ +  +M EKGC  ++V Y+ +++GLCR     EA ++ N M+  G  P+
Sbjct: 372 LFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPN 431

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
            YT+++L+ G  K G   +A+ ++  M +     +   Y+ LIDG C VG +++A  +W+
Sbjct: 432 VYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWS 491

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK---GIKPTLVSCNTIIKGYC 356
            M++  I P+ ++Y  +I G C +G +  A +L++EM+ +     +P +V+ N ++ G C
Sbjct: 492 KMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551

Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLING---------------------FVREEN 395
              D S+A + L+ M+  G DPD I+ NT +N                       ++ + 
Sbjct: 552 MQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQR 611

Query: 396 MDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
           +  A  +V  M  + L P   T+ +I+   C+  +++ +    WR
Sbjct: 612 VSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAINKCWR 656



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 232/456 (50%), Gaps = 8/456 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQ----LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           ++N+++N    EG      +    ++NS     + P   ++N +I  LCK G  DRA EV
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEV 209

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              M +    PD  TY TL+   C++E + EA  +  EM   G +P  V ++ LI    +
Sbjct: 210 FRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G L R       M   G  P+ V Y  +I+G C  G + +A+ + + M+   C+ + VT
Sbjct: 270 KGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T++NGL + +   +   L   M ERG   + + ++ LI G  K+G   +A+ L+  M 
Sbjct: 330 YGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMA 389

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +K  +P+IV Y+ +IDG C+ G+  +A ++   MIS    PN  +Y  L+ G+   G   
Sbjct: 390 EKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSE 449

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA ++W EM   G        + +I G C  G   +A    SKM++ G+ PD+++Y+++I
Sbjct: 450 EAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMI 509

Query: 388 NGFVREENMDKAFALVSKM---ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            G     +MD A  L  +M   E     PDV+TYN++L G C Q  +  +  +L  M+++
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDR 569

Query: 445 GLNPDRSTYTTLINGHVSQ-NNLKEAFRFHDEMLQR 479
           G +PD  T  T +N    + ++ +E   F +E++ R
Sbjct: 570 GCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVAR 605



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 78/146 (53%)

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           I P  +S N +IK  C+ G   +A E    M  +   PD  +Y TL++G  +EE +D+A 
Sbjct: 183 ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAV 242

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L+ +M+++G  P  + YNV++ G C++G +     ++  M  KG  P+  TY TLI+G 
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGL 302

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +  L +A    + M+    +P+D 
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDV 328



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/219 (22%), Positives = 101/219 (46%), Gaps = 13/219 (5%)

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI----SYGILINGYCSMGHVTEAFRL 332
           T +++I+ +  +G+     KL    +SR    N +    S+ ++   Y       +A  L
Sbjct: 79  TLSSMIENYANLGDFASVEKL----LSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDL 134

Query: 333 WYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG----VDPDSISYNTLI 387
           ++ MV +   K ++ S N+++      G   +  EF   +V+      + P+ +S+N +I
Sbjct: 135 FHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVI 194

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
               +   +D+A  +   M  +  +PD  TY  ++ G C++ R+ ++ L+L  M  +G +
Sbjct: 195 KALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCS 254

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P    Y  LI+G   + +L    +  D M  +G  P++ 
Sbjct: 255 PSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV 293


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 241/492 (48%), Gaps = 10/492 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V +LC    I  A   L EM  +G        + ++ A CR G    A + +  +  KG
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
                   N +++ +C++G  D   E+L ++   G  PD  +YN +L   C  +   + E
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233

Query: 121 EIFCEMSR----------RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
           E+  EM R           G  PD+  ++T+I    ++G  + A      M S GL P+ 
Sbjct: 234 ELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNV 293

Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
           V Y  ++ G C      EA  +  EM ++ C +D VT+N +++  C+  ++    +L  +
Sbjct: 294 VCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 353

Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE 290
           MLE G  PD  T+TT+I+G CK+G +++A+ L   M+    KP+ ++Y  ++ G C+   
Sbjct: 354 MLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAER 413

Query: 291 MEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNT 350
              A +L + MI +   PN +++  LIN  C  G   +A  L  +M+  G  P L+S +T
Sbjct: 414 WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYST 473

Query: 351 IIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG 410
           +I G  ++G   +A E L+ M+++G+ P++I Y+++ +   RE   DK   +   +++  
Sbjct: 474 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDAT 533

Query: 411 LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
           +  D   YN +++  C++     +      M+  G  P+ STYT LI G  S+  ++EA 
Sbjct: 534 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 593

Query: 471 RFHDEMLQRGFV 482
               E+  R  V
Sbjct: 594 DLLSELCSRRAV 605



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 224/461 (48%), Gaps = 16/461 (3%)

Query: 34  NTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ 93
           + LI + C  G   +A + +++    G   GV  YN++I G C+ G+             
Sbjct: 48  SALIRSLCAAGRTADAARALDT---AGDAAGVVAYNAMIAGYCRAGQ---VAAARRLAAA 101

Query: 94  MGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
           + + P+  TY  ++   C +  +++A  +  EM  RG A        ++    R G    
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 154 ALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILN 213
           A+   + + + G   D+    ++++  C  G V E +++  ++   GC  D+V+YN +L 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 214 GLCRAKMLTEADDLFNEML----------ERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           GLC AK   + ++L  EM+          E G  PD   + T+I G CKDG+   A ++ 
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
             M    +KP++V YNT++ G C     E+A  L A+M       + +++ IL++ +C  
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
           G V     L  +M+  G  P +++  T+I G+C+ G   +A   L  M + G  P++ISY
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 401

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
             ++ G  R E    A  L+S M  QG +P+ +T+N ++   C++G    +  +L +M+ 
Sbjct: 402 TIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLV 461

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            G +PD  +Y+T+I+G       +EA    + M+ +G  P+
Sbjct: 462 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 502



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 113/287 (39%), Gaps = 16/287 (5%)

Query: 209 NTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQ 268
           + ++  LC A    +A    +     G       +  +I G+C+ G +  A  L   +  
Sbjct: 48  SALIRSLCAAGRTADAARALDTA---GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV-- 102

Query: 269 KSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
             + P+  TY  ++   C  G +  A  +  +M  R  +       +++   C  G    
Sbjct: 103 -PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
           A R    +  KG      +CN ++   C  G   +  E L K+ S G +PD +SYN ++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 389 GFVREENMD----------KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
           G    +  D          +    +S+M   G  PD+  Y  I+ G C+ G    +  IL
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            RM   GL P+   Y T++ G  S    +EA     EM Q     DD
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDD 328


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 242/496 (48%), Gaps = 36/496 (7%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            M  +G+ P   TY+ L+ A  R G   +   L+  M   GL+P ++TY   I  L +  
Sbjct: 225 RMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRAR 284

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
           R D A  +  EM   G  PD  TY  L+   C    + +A+E++ +M     +PD V++ 
Sbjct: 285 RIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYI 344

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
           TL+  F + G L+    ++ EM+  G  PD V YTI+I   C++G V  A  M D M  K
Sbjct: 345 TLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTK 404

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G   ++ TYNT++ GL +A+ L EA +L   M   GV P  +++   I  + K G+  KA
Sbjct: 405 GIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKA 464

Query: 260 LNLFDIMTQKSI-----------------------------------KPDIVTYNTLIDG 284
           ++ F+ M ++ I                                    PD VTYN L+  
Sbjct: 465 IDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKC 524

Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
           + K G+++KA +L ++MIS+   P+ +    LIN     G V  A++++  +    + PT
Sbjct: 525 YSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPT 584

Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
           +V+ N ++ G  + G   KA E    M   G  P++I++N+L++   + + +D A  +  
Sbjct: 585 VVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFC 644

Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
           +M      PDV+TYN I+ G  R+GR+ D     +  ++K L+PD  T  TLI G V   
Sbjct: 645 RMTMMNCNPDVLTYNTIIYGLIREGRI-DYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHG 703

Query: 465 NLKEAFRFHDEMLQRG 480
            +++A +   E + + 
Sbjct: 704 RVEDAIKVVMEFVHQA 719



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 255/519 (49%), Gaps = 37/519 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +  AL     I  A   L +M + G   +  +YN LI+     GF  EA ++   M  +G
Sbjct: 172 IFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL-PGFCNEALKVYKRMISEG 230

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +KP + TY++L+  L ++G   +   +L+EM  +GL P+  TY   +    R   + +A 
Sbjct: 231 MKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAW 290

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            IF EM   G  PD+++++ LI      G+LD+A   + +M+++   PD V Y  +++ +
Sbjct: 291 GIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKF 350

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +    +  +EM   G   DVVTY  ++  LC++  +  A D+ + M  +G+FP+ 
Sbjct: 351 GKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL 410

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           +T+ T+I G  K   +++AL L + M    +KP   +Y   ID + K G+  KA   +  
Sbjct: 411 HTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFET 470

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M  R I P+  +    +      G ++EA  ++ ++   G+ P  V+ N ++K Y ++G 
Sbjct: 471 MKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQ 530

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             KA + LS+M+S+G +PD +  N+LIN   +   +D A+ +  +++N  L P V+TYN+
Sbjct: 531 IDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNI 590

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL---------------------------------- 446
           +LTG  ++G++  +  +   M E G                                   
Sbjct: 591 LLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN 650

Query: 447 -NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            NPD  TY T+I G + +  +  AF F  +M ++   PD
Sbjct: 651 CNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPD 688



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 250/490 (51%), Gaps = 11/490 (2%)

Query: 1    MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
            +++ L K+  +D A    C M      PD +TYNT+I    REG ++ AF   + M  K 
Sbjct: 626  LLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KF 684

Query: 61   LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTL----LVESCRKEN 115
            L P   T  +LI G+ + GR + A +V+ E + Q  L  ++  +  L    L E+  +E 
Sbjct: 685  LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEA 744

Query: 116  MSEAEEIFCEMSRRGVAPDIVSFSTLIGIF-SRNGQLDRALMYFREMKSAGLVPDNVLYT 174
            +S AE + C      V  D      LI +   R   LD   ++ +  K+ G+ P    Y 
Sbjct: 745  ISFAEILVCN----SVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYN 800

Query: 175  IIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER 234
             +++G   + F  +AL++ ++M   G   +  TYN +L+   ++K + +  DL++EM  R
Sbjct: 801  CLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSR 860

Query: 235  GVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA 294
            G  P+  T   +I    K  N+NKAL+L+  +      P   TY  LIDG  K G  E+A
Sbjct: 861  GCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQA 920

Query: 295  NKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG 354
             K++ +M+     PN + Y ILING+   G +  A  L+ +MV +GI+P L S   +++ 
Sbjct: 921  MKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVEC 980

Query: 355  YCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
             C +G   +A ++  ++   G+DPD++SYN +ING  +   +D+A +L S+M+N+G+ PD
Sbjct: 981  LCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPD 1040

Query: 415  VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHD 474
            + TYN ++      G++  +  +   +   GL P   TY  LI GH    N  +AF    
Sbjct: 1041 LYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFK 1100

Query: 475  EMLQRGFVPD 484
            +M+  G  P+
Sbjct: 1101 KMMVVGCSPN 1110



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 247/485 (50%), Gaps = 2/485 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + AL +  +ID A     EM+ +G  PD +TY  LI+A C  G L++A +L   M     
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P   TY +L++   K G  +  K   +EM   G +PD  TY  L+   C+  ++  A +
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFD 396

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
           +   M+ +G+ P++ +++T+I    +  +LD AL     M+S G+ P    Y + I+ Y 
Sbjct: 397 MLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYG 456

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++G   +A+   + M ++G +  +   N  L  L     ++EA+D+FN++ + G+ PD  
Sbjct: 457 KSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSV 516

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  L+  + K G ++KA  L   M  K  +PD++  N+LI+   K G ++ A K++  +
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRL 576

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
            + K++P  ++Y IL+ G    G + +A  L+  M   G  P  ++ N+++    ++   
Sbjct: 577 KNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAV 636

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
             A +   +M     +PD ++YNT+I G +RE  +D AF    +M+ + L PD +T   +
Sbjct: 637 DLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTL 695

Query: 422 LTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           + G  R GR+ D+  ++   + +  L  +   +  L+   +++  ++EA  F + ++   
Sbjct: 696 IPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNS 755

Query: 481 FVPDD 485
              DD
Sbjct: 756 VCQDD 760



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 243/522 (46%), Gaps = 38/522 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ALC   K+D AK    +M      PD VTY TL++ + + G LE   +  N M   G
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY  LI  LCK G  DRA ++LD M   G+ P+  TYNT++    +   + EA 
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK------------------ 162
           E+   M   GV P   S+   I  + ++G   +A+  F  MK                  
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490

Query: 163 -----------------SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                              GL PD+V Y +++  Y + G + +A ++  EM+ KGC  DV
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +  N+++N L +A  +  A  +F  +    + P   T+  L+ G  K+G + KAL LF  
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGS 610

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           MT+    P+ +T+N+L+D   K   ++ A K++  M     +P+ ++Y  +I G    G 
Sbjct: 611 MTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGR 670

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG-VDPDSISYN 384
           +  AF  +++M  K + P  V+  T+I G  R G    A + + + V +  +  +S  + 
Sbjct: 671 IDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWG 729

Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            L+   + E  +++A +    +    +  D      ++   C++ +  D++ +  +  + 
Sbjct: 730 ELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKN 789

Query: 445 -GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
            G++P   +Y  L++G +  N  ++A    ++M   G  P++
Sbjct: 790 LGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNN 831



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 198/369 (53%), Gaps = 1/369 (0%)

Query: 36   LINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            LI   C+     +A  + +  +   G+ P + +YN L++GL      ++A E+ ++M   
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 95   GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
            G  P+  TYN LL    + + +++  +++ EM  RG  P+ ++ + +I    ++  L++A
Sbjct: 826  GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885

Query: 155  LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG 214
            L  + E+ S    P    Y  +I+G  + G   +A+K+ +EML+ GC  + V YN ++NG
Sbjct: 886  LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945

Query: 215  LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
              ++  +  A +LF +M++ G+ PD  ++T L+   C  G +++A+  F+ +    + PD
Sbjct: 946  FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005

Query: 275  IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
             V+YN +I+G  K   +++A  L+++M +R ISP+  +Y  LI      G V  A +++ 
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYE 1065

Query: 335  EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
            E+   G++P++ + N +I+G+  SG+  +A     KM+  G  P++ ++  L N + R  
Sbjct: 1066 ELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125

Query: 395  NMDKAFALV 403
             +   F  V
Sbjct: 1126 LVHNPFGAV 1134



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 170/381 (44%), Gaps = 39/381 (10%)

Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
           +L E  R E+M     +F  M ++ +  ++ ++ T+    S  G + RA    R+M   G
Sbjct: 140 ILREQRRIEDMVF---VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVG 196

Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
                     I+N Y  NG +                      + +L G C      EA 
Sbjct: 197 F---------ILNAYSYNGLI----------------------HLLLPGFC-----NEAL 220

Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
            ++  M+  G+ P   T++ L+    + G+  K +NL + M    ++P+I TY   I   
Sbjct: 221 KVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRAL 280

Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
            +   ++ A  ++ +M      P+ I+Y +LI+  C+ G + +A  L+ +M      P  
Sbjct: 281 GRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDR 340

Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
           V+  T++  + + GD      F ++M  +G  PD ++Y  LI    +  ++D+AF ++  
Sbjct: 341 VTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDV 400

Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
           M  +G+ P++ TYN ++ G  +  R+ ++  +L  M   G+ P   +Y   I+ +    +
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGD 460

Query: 466 LKEAFRFHDEMLQRGFVPDDA 486
             +A    + M +RG +P  A
Sbjct: 461 PAKAIDTFETMKKRGIMPSIA 481


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 233/462 (50%)

Query: 20  EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
            M   GV P+  T+N +IN  CR       F ++  M   G++P + T+ +++NGLC +G
Sbjct: 51  HMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEG 110

Query: 80  RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
              +A   +D +  MG   D  T   ++   C+  + S A     +M  +    D+ ++S
Sbjct: 111 NVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYS 170

Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
            ++    ++G +  AL  F +M   G+ P+   Y  +I+G C      EA  +   M+ K
Sbjct: 171 AVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRK 230

Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
           G + DV T+N I     +  M++ A  +F+ M   G+  +  T+ ++I  HC    M  A
Sbjct: 231 GIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDA 290

Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
           + +FD+M +K   P+IVTYN+LI G+C+   M KA     +M++  + P+ +++  LI G
Sbjct: 291 MEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGG 350

Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
           +C  G    A  L++ M   G  P L +C  I+ G  +    S+A     ++     D D
Sbjct: 351 FCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLD 410

Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
            I Y+ ++NG      ++ A  L S + ++G+  DV+TYN+++ G C++G + D+E +L 
Sbjct: 411 IIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLM 470

Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           +M E G  PD  TY   + G + +  + ++ ++   M  +GF
Sbjct: 471 KMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGF 512



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 237/471 (50%), Gaps = 1/471 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LC+ +        L  M + GV P  VT+ T++N  C EG + +A + ++ +   G
Sbjct: 67  VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 126

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
            +   +T  ++INGLCK G    A   L +M +   + D   Y+ ++   C+   + EA 
Sbjct: 127 YESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEAL 186

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           ++F +M+ +G+ P++ +++ LI       +   A      M   G++PD   + +I   +
Sbjct: 187 DLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRF 246

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G +  A  +   M   G   +VVTYN+I+   C    + +A ++F+ M+ +G  P+ 
Sbjct: 247 LKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNI 306

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+ +LIHG C+  NMNKA+     M    + PD+VT++TLI GFCK G+   A +L+  
Sbjct: 307 VTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFV 366

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           M      P+  +  I+++G       +EA  L+ E+        ++  + I+ G C SG 
Sbjct: 367 MHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGK 426

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
            + A E  S + S+GV  D ++YN +ING  +E  +D A  L+ KME  G  PD  TYNV
Sbjct: 427 LNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNV 486

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
            + G  R+  +  S   L  M  KG   + +T   LIN + S N    AF+
Sbjct: 487 FVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLIN-YFSANKENRAFQ 536



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 201/407 (49%), Gaps = 35/407 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++N LCK     +A  +L +ME++    D   Y+ +++  C++G + EA  L + M+GKG
Sbjct: 137 IINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKG 196

Query: 61  LKPGVFTYNSLINGLC-----------------------------------KKGRCDRAK 85
           ++P +FTYN LI+GLC                                   K G   RAK
Sbjct: 197 IQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAK 256

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +   M  MG+  +  TYN+++   C    M +A E+F  M R+G  P+IV++++LI  +
Sbjct: 257 SIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGW 316

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
                +++A+ +  EM + GL PD V ++ +I G+C+ G  + A ++   M + G + D+
Sbjct: 317 CETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDL 376

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
            T   IL+GL +    +EA  LF E+ +     D   ++ +++G C  G +N AL LF  
Sbjct: 377 QTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSY 436

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           ++ K +K D+VTYN +I+G CK G ++ A  L   M      P+  +Y + + G      
Sbjct: 437 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 496

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV 372
           ++++ +    M GKG +    +   +I  +  + +      FL K V
Sbjct: 497 ISKSTKYLMFMKGKGFRANATTTKLLINYFSANKENRAFQVFLQKFV 543



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 135/302 (44%), Gaps = 35/302 (11%)

Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
            K +  A D +++M+    FP    F  L     K  +   A++L   M+   +KP++ T
Sbjct: 4   VKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVST 63

Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
           +N +I+  C++        +   M    + P+ +++  ++NG C  G+V +A R    + 
Sbjct: 64  HNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLK 123

Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
             G +    +   II G C+ G +S A  +L KM  +  + D  +Y+ +++G  ++  + 
Sbjct: 124 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVF 183

Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS------ 451
           +A  L S+M  +G+ P++ TYN ++ G C   R  ++  +L  M+ KG+ PD        
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIA 243

Query: 452 -----------------------------TYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
                                        TY ++I  H   N +K+A    D M+++G +
Sbjct: 244 GRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCL 303

Query: 483 PD 484
           P+
Sbjct: 304 PN 305


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 228/425 (53%), Gaps = 3/425 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ AL + H++D A   L  M+  G++ +    +  I +YC EG ++  ++++  M   G
Sbjct: 225 LLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYG 284

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +K  V  Y  +I+ LCK      A  +L +M+  G+S D+ + ++++   C+K    +A 
Sbjct: 285 IKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAI 344

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   ++   V P+I  +S+ +    ++G +  A   F+EM   GL PD   YTIII GY
Sbjct: 345 NL---LNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGY 401

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C+ G + +A +   EML+ G    V TY  ++N  C++  +  A+ L   M+  G+ PD 
Sbjct: 402 CKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDV 461

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            TF  LI G  K G + KA  L DIM    + PD VTYN LI      G   +A  +  +
Sbjct: 462 VTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHE 521

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
           +I R +SP+ +++  +I+G+   G+  EAF +W  M  + +KP +V+C+ ++ GYCR+  
Sbjct: 522 LIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARR 581

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A+    KM+  G+ PD + YN LI+GF    NM+ A  LV+ M + G +P++ T+  
Sbjct: 582 MDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRA 641

Query: 421 ILTGF 425
              GF
Sbjct: 642 FALGF 646



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 244/475 (51%), Gaps = 12/475 (2%)

Query: 18  LCEMEQKGVYPDT--------VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           LC++  K VY DT          Y+ L++ Y  E  +  A  L++ +    + P +   N
Sbjct: 165 LCDLLFKLVY-DTGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCN 223

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
           SL+  L +  + D A ++L+ M   G+  + +  +  +   C + N+    +I  EM   
Sbjct: 224 SLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNY 283

Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
           G+  D+++++ +I    +   +  A     +M   G+  D+V  + +I+GYC+ G   +A
Sbjct: 284 GIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKA 343

Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
           + + +    +    ++  Y++ +  LC+   + EA   F EM E G++PD + +T +I G
Sbjct: 344 INLLNFFNVRP---NIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGG 400

Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
           +CK G++NKA      M +  I P + TY  LI+  CK G+M  A  L   M+   + P+
Sbjct: 401 YCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPD 460

Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
            +++  LI+G+   G++ +AF L   M   G+ P  V+ N +I      G  ++A + L 
Sbjct: 461 VVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILH 520

Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
           +++  G+ PD +++  +I+GF ++ N ++AF + S M  + + PDV+T + +L G+CR  
Sbjct: 521 ELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRAR 580

Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           RM ++  +  +M++ GL PD   Y  LI+G  S  N+  A      M+  GF+P+
Sbjct: 581 RMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPN 635



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 214/392 (54%), Gaps = 3/392 (0%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           + + C +  I S    L EM+  G+  D + Y  +I+A C+   ++ A  L+  M   G+
Sbjct: 261 IESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGI 320

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
                + +S+I+G CKKGR D+A  +L+      + P+   Y++ + + C+  NM EA +
Sbjct: 321 SVDSVSVSSVIDGYCKKGRSDKAINLLN---FFNVRPNIFVYSSFMTKLCKDGNMLEASK 377

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
            F EMS  G+ PD   ++ +IG + + G +++A  Y  EM   G+ P    YT++IN  C
Sbjct: 378 TFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACC 437

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           ++G +  A  +   M+ +G + DVVT+N +++G  +   L +A +L + M   G+ PD  
Sbjct: 438 KSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTV 497

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T+  LIH     G  N+A ++   + ++ + PD++T+  +IDGF K G  E+A  +W+ M
Sbjct: 498 TYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYM 557

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
             R + P+ ++   L+NGYC    + EA  L+ +M+  G+KP LV  N +I G+C +G+ 
Sbjct: 558 SERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNM 617

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
           + A   ++ M+ +G  P+  ++     GF ++
Sbjct: 618 NAACNLVAMMIDDGFLPNITTHRAFALGFEKK 649



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 236/461 (51%), Gaps = 7/461 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +V+    + K+  A   + E++   ++P     N+L+ A  R   L+ A+ ++  M   G
Sbjct: 190 LVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGMQSFG 249

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           +       +  I   C +G      ++L EM   G+  D   Y  ++   C+   +  A 
Sbjct: 250 MHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVAT 309

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA--LMYFREMKSAGLVPDNVLYTIIIN 178
            +  +M   G++ D VS S++I  + + G+ D+A  L+ F  ++     P+  +Y+  + 
Sbjct: 310 SLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVR-----PNIFVYSSFMT 364

Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
             C++G +LEA K   EM E G   D   Y  I+ G C+   + +A     EML+ G+ P
Sbjct: 365 KLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITP 424

Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
              T+T LI+  CK G+M  A  L   M  + + PD+VT+N LIDGF K G ++KA +L 
Sbjct: 425 SVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELL 484

Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
             M S  +SP+ ++Y  LI+   + G+  EA  + +E++ +G+ P +++   +I G+ + 
Sbjct: 485 DIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKK 544

Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
           G+  +A    S M    V PD ++ + L+NG+ R   MD+A AL  KM + GL PD++ Y
Sbjct: 545 GNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLY 604

Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
           N ++ GFC  G M+ +  ++  MI+ G  P+ +T+     G
Sbjct: 605 NNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALG 645



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 152/283 (53%), Gaps = 5/283 (1%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   CK   I+ A  +L EM + G+ P   TY  LINA C+ G +  A  L+  M  +G
Sbjct: 397 IIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEG 456

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L P V T+N LI+G  KKG   +A E+LD M   G+SPDT TYN L+     +   +EA+
Sbjct: 457 LIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAK 516

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           +I  E+ RRG++PD+++F+ +I  FS+ G  + A + +  M    + PD V  + ++NGY
Sbjct: 517 DILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGY 576

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           CR   + EA  +  +ML+ G   D+V YN +++G C A  +  A +L   M++ G  P+ 
Sbjct: 577 CRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNI 636

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
            T      G  K    N  L+         +K  ++T++T +D
Sbjct: 637 TTHRAFALGFEKKWVKNPELH-----ASLKLKQILLTHSTCLD 674


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 241/456 (52%), Gaps = 24/456 (5%)

Query: 26  VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
           + P+ +++N +I A C+  F++ A ++   M  +   P  +TY +L++GLCK+ R D A 
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242

Query: 86  EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
            +LDEM   G SP    YN L+   C+K +++   ++   M  +G  P+ V+++TLI   
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
              G+LD+A+     M S+  +P++V Y  +ING  +     +A+++   M E+G  ++ 
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
             Y+ +++GL +     EA  L+ +M E+G  P+   ++ L+ G C++G  N+A  + + 
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M      P+  TY++L+ GF K G  E+A ++W +M     S N   Y +LI+G C +G 
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE---GVDPDSIS 382
           V EA  +W +M+  GIKP  V+ ++IIKG C  G    A +   +M+ +      PD ++
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542

Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF------CRQGRMHDSEL 436
           YN L++G   ++++ +A  L++ M ++G  PDVIT N  L         C +GR    EL
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602

Query: 437 ---------------ILWRMIEKGLNPDRSTYTTLI 457
                          I+  M+ K L P  ST+  ++
Sbjct: 603 VVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIV 638



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 237/464 (51%), Gaps = 24/464 (5%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++ ALCK   +D A      M ++   PD  TY TL++  C+E  ++EA  L++ M  +G
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P    YN LI+GLCKKG   R  +++D M   G  P+  TYNTL+   C K  + +A 
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 312

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
            +   M      P+ V++ TLI    +  +   A+     M+  G   +  +Y+++I+G 
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL 372

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
            + G   EA+ +  +M EKGC  ++V Y+ +++GLCR     EA ++ N M+  G  P+ 
Sbjct: 373 FKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNA 432

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
           YT+++L+ G  K G   +A+ ++  M +     +   Y+ LIDG C VG +++A  +W+ 
Sbjct: 433 YTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSK 492

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK---GIKPTLVSCNTIIKGYCR 357
           M++  I P+ ++Y  +I G C +G +  A +L++EM+ +     +P +V+ N ++ G C 
Sbjct: 493 MLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCM 552

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLING---------------------FVREENM 396
             D S+A + L+ M+  G DPD I+ NT +N                       ++ + +
Sbjct: 553 QKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRV 612

Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
             A  +V  M  + L P   T+ +I+   C+  +++ +    WR
Sbjct: 613 SGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWR 656



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 236/456 (51%), Gaps = 8/456 (1%)

Query: 32  TYNTLINAYCREGFLEEAFQ----LMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
           ++N+++N    EG      +    ++NS     + P   ++N +I  LCK    DRA EV
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209

Query: 88  LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
              M +    PD  TY TL+   C++E + EA  +  EM   G +P  V ++ LI    +
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269

Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
            G L R       M   G VP+ V Y  +I+G C  G + +A+ + + M+   C+ + VT
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329

Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
           Y T++NGL + +  T+A  L + M ERG   + + ++ LI G  K+G   +A++L+  M 
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389

Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
           +K  KP+IV Y+ L+DG C+ G+  +A ++   MI+    PN  +Y  L+ G+   G   
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449

Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
           EA ++W EM   G        + +I G C  G   +A    SKM++ G+ PD+++Y+++I
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509

Query: 388 NGFVREENMDKAFALVSKM---ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
            G     +MD A  L  +M   E     PDV+TYN++L G C Q  +  +  +L  M+++
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569

Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFR-FHDEMLQR 479
           G +PD  T  T +N    ++N  +  R F +E++ R
Sbjct: 570 GCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 237/493 (48%), Gaps = 10/493 (2%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
           M+ +       DS +  L  +  +       ++  +  AY +    ++A  L + M  + 
Sbjct: 83  MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEF 142

Query: 60  GLKPGVFTYNSLINGLCKKGRCDRAKE----VLDEMLQMGLSPDTATYNTLLVESCRKEN 115
             K  V ++NS++N +  +G   R  E    V++  + M +SP+  ++N ++   C+   
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRF 202

Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
           +  A E+F  M  R   PD  ++ TL+    +  ++D A++   EM+S G  P  V+Y +
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262

Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
           +I+G C+ G +    K+ D M  KGCV + VTYNT+++GLC    L +A  L   M+   
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322

Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
             P+  T+ TLI+G  K      A+ L   M ++    +   Y+ LI G  K G+ E+A 
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382

Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
            LW  M  +   PN + Y +L++G C  G   EA  +   M+  G  P   + ++++KG+
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442

Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
            ++G   +A +   +M   G   +   Y+ LI+G      + +A  + SKM   G+ PD 
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502

Query: 416 ITYNVILTGFCRQGRMHDSELILWRMI----EKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
           + Y+ I+ G C  G M D+ L L+  +    E    PD  TY  L++G   Q ++  A  
Sbjct: 503 VAYSSIIKGLCGIGSM-DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVD 561

Query: 472 FHDEMLQRGFVPD 484
             + ML RG  PD
Sbjct: 562 LLNSMLDRGCDPD 574



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 76/146 (52%)

Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
           I P  +S N +IK  C+     +A E    M      PD  +Y TL++G  +EE +D+A 
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242

Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
            L+ +M+++G  P  + YNV++ G C++G +     ++  M  KG  P+  TY TLI+G 
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302

Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDDA 486
             +  L +A    + M+    +P+D 
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDV 328



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 13/219 (5%)

Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI----SYGILINGYCSMGHVTEAFRL 332
           T +++I+ +   G+ +   KL    +SR    N +    S+ ++   Y       +A  L
Sbjct: 79  TLSSMIESYANSGDFDSVEKL----LSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDL 134

Query: 333 WYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG----VDPDSISYNTLI 387
           ++ MV +   K ++ S N+++      G   +  EF   +V+      + P+ +S+N +I
Sbjct: 135 FHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVI 194

Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
               +   +D+A  +   M  +  +PD  TY  ++ G C++ R+ ++ L+L  M  +G +
Sbjct: 195 KALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCS 254

Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
           P    Y  LI+G   + +L    +  D M  +G VP++ 
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 239/487 (49%), Gaps = 40/487 (8%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++AL K + ID A +   +M       D  TYNTLI+  C+ G ++EA +L+  M  KG
Sbjct: 185 LIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKG 244

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P VFTY  LI G C   R D A  V + M   G+ P+ AT   L+    R  + S+A 
Sbjct: 245 HFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKAL 304

Query: 121 EIFCEMSRRGVAPDIVSF----STLIGIFSRNGQLDRALMYFRE-MKSAGLVPDNVLYTI 175
           E+  E   R    + V F     T++   + N      +++ R  +   G  P N ++ +
Sbjct: 305 ELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNV 364

Query: 176 I----------------------------INGYC-------RNGFVLEALKMRDEMLEKG 200
           +                            I  Y        +N +  E  ++  +++  G
Sbjct: 365 VMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDG 424

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
            + +V +YN I+N  CRAK++  A + F +M  RGV P+  TF TLI+GHCKDG ++KA 
Sbjct: 425 LISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKAR 484

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L + + +  +KPDI T+++++DG C++   E+A + + +MI   I+PN + Y ILI   
Sbjct: 485 KLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSL 544

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
           C++G V  + +L   M  +GI P   S N +I+ +CR     KA +    M   G++PD+
Sbjct: 545 CTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDN 604

Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
            +Y+  I        +++A  +   ME  G  PD    N+I+    +Q  + +++ I+ R
Sbjct: 605 YTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIER 664

Query: 441 MIEKGLN 447
             +KG++
Sbjct: 665 CRQKGIS 671



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 228/482 (47%), Gaps = 16/482 (3%)

Query: 13  SAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLI 72
           SA +F C++   G+ P T  YN LI+A  +   ++ A+     M+        FTYN+LI
Sbjct: 163 SAHVF-CQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLI 221

Query: 73  NGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVA 132
           +G+CK G  D A  ++ +M   G  P+  TY  L+   C    + EA  +F  M   GV 
Sbjct: 222 HGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVY 281

Query: 133 PDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAG---------LVPDNVLYTIIINGYCR 182
           P+  +   L+ G+F R     +AL    E              L  D VLY +  N   +
Sbjct: 282 PNEATVRALVHGVF-RCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAK 340

Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
              V     +R  +   G       +N ++  L +   L E  D+F  + ++GV      
Sbjct: 341 EMVVF----LRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGA 396

Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
           +  LI    K+    +   ++  +    +  ++ +YN +I+ FC+   M+ A++ + DM 
Sbjct: 397 YLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQ 456

Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
            R + PN +++  LING+C  G + +A +L   ++  G+KP + + ++I+ G C+     
Sbjct: 457 VRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTE 516

Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
           +A E  ++M+  G++P+++ YN LI       ++ ++  L+ +M+ +G+ PD  +YN ++
Sbjct: 517 EALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALI 576

Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
             FCR  ++  ++ +   M   GLNPD  TY+  I        L+EA +    M   G  
Sbjct: 577 QIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCS 636

Query: 483 PD 484
           PD
Sbjct: 637 PD 638



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 227/459 (49%), Gaps = 11/459 (2%)

Query: 35  TLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
            L+ ++ R G    +  +   +S  GL P    YN+LI+ L K    D A     +M   
Sbjct: 149 ALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAAD 208

Query: 95  GLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRA 154
               D  TYNTL+   C+   + EA  +  +M  +G  P++ +++ LI  F    ++D A
Sbjct: 209 NCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEA 268

Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTY----NT 210
              F  MK +G+ P+      +++G  R     +AL++  E L++    + V +    +T
Sbjct: 269 FGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDT 328

Query: 211 ILNGLCRAKMLTEADDLFNEMLERG-VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
           +L  L    M  E       +L RG  FP    F  ++    K   + +  ++F+I+ ++
Sbjct: 329 VLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQ 388

Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS---MGHV 326
            +K  I  Y  LI+   K    E+ ++++  +IS  +  N  SY ++IN +C    M + 
Sbjct: 389 GVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNA 448

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
           +EAFR   +M  +G+ P LV+ NT+I G+C+ G   KA + L  ++  G+ PD  +++++
Sbjct: 449 SEAFR---DMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSI 505

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           ++G  + +  ++A    ++M   G+ P+ + YN+++   C  G +  S  +L RM ++G+
Sbjct: 506 VDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGI 565

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
           +PD  +Y  LI      N +++A +  D M + G  PD+
Sbjct: 566 SPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDN 604



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 196/421 (46%), Gaps = 40/421 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLM------- 53
           ++   C   ++D A      M+  GVYP+  T   L++   R     +A +L+       
Sbjct: 255 LIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDRE 314

Query: 54  ---------------------NSMSGK------------GLKPGVFTYNSLINGLCKKGR 80
                                NSM+ +            G  PG   +N ++  L K   
Sbjct: 315 QEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAE 374

Query: 81  CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
                +V + + + G+      Y  L+    + E   E + ++ ++   G+  ++ S++ 
Sbjct: 375 LRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNM 434

Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
           +I  F R   +D A   FR+M+  G+VP+ V +  +ING+C++G + +A K+ + +LE G
Sbjct: 435 IINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENG 494

Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
              D+ T+++I++GLC+ K   EA + F EM+E G+ P+   +  LI   C  G++ +++
Sbjct: 495 LKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSV 554

Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
            L   M ++ I PD  +YN LI  FC++ ++EKA KL+  M    ++P+  +Y   I   
Sbjct: 555 KLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEAL 614

Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
              G + EA +++Y M   G  P    CN IIK   +     +A   + +   +G+  +S
Sbjct: 615 SESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLNS 674

Query: 381 I 381
           I
Sbjct: 675 I 675



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 203/458 (44%), Gaps = 40/458 (8%)

Query: 67  TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
            + +L N L +KG    + ++L E+  +G          LL    R    + +  +FC++
Sbjct: 111 VHRALRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQI 170

Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
           S  G++P    ++ LI    ++  +D A + F++M +   V D   Y  +I+G C+ G V
Sbjct: 171 SFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVV 230

Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
            EAL++  +M +KG   +V TY  ++ G C A  + EA  +F  M + GV+P+  T   L
Sbjct: 231 DEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRAL 290

Query: 247 IHGHCKDGNMNKALNLFD-----------------------IMTQKSIKPDIV------- 276
           +HG  +  + +KAL L                          +   S+  ++V       
Sbjct: 291 VHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVL 350

Query: 277 ----------TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHV 326
                      +N ++    K  E+ +   ++  +  + +     +Y  LI         
Sbjct: 351 GRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWR 410

Query: 327 TEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTL 386
            E  R++ +++  G+   + S N II  +CR+     A E    M   GV P+ +++NTL
Sbjct: 411 EEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTL 470

Query: 387 INGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
           ING  ++  +DKA  L+  +   GL PD+ T++ I+ G C+  R  ++      MIE G+
Sbjct: 471 INGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGI 530

Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           NP+   Y  LI    +  ++  + +    M + G  PD
Sbjct: 531 NPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPD 568



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%)

Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
           W   ++  ++ +   +  L N     G    +  L  E+   G + T      ++  + R
Sbjct: 97  WLSHVNPTLAAHNSVHRALRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGR 156

Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
            G A+ +     ++   G+ P +  YN LI+  V+  ++D A+    +M     V D  T
Sbjct: 157 LGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFT 216

Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
           YN ++ G C+ G + ++  ++ +M +KG  P+  TYT LI G    + + EAF   + M 
Sbjct: 217 YNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMK 276

Query: 478 QRGFVPDDA 486
             G  P++A
Sbjct: 277 DSGVYPNEA 285


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 247/473 (52%), Gaps = 9/473 (1%)

Query: 10  KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
           K+ +A   L  M++ GV P+    NT I    +   LE+A + +  M   G+KP + TYN
Sbjct: 246 KLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYN 305

Query: 70  SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR- 128
           SLI G C   R + A E++  +   G  PD  +Y T++   C+++ +   E++ C M + 
Sbjct: 306 SLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI---EQVKCLMEKM 362

Query: 129 ---RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
                + PD V+++TLI + S++G  D AL + +E +  G   D V Y+ I++ +C+ G 
Sbjct: 363 VQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGR 422

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           + EA  +  +M  + C  DVVTY  I++G CR   + EA  +  +M + G  P+  ++T 
Sbjct: 423 MDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTA 482

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           L++G C  G   +A  + ++  +    P+ +TY  ++ GF + G++ +A  L  +M+ + 
Sbjct: 483 LLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKG 542

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P  +   +LI   C    V EA +   E + KG    +V+  T+I G+C+ GD   A 
Sbjct: 543 FFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAAL 602

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
             L  M      PD+++Y  L +   ++  +D+A  L+ KM ++GL P  +T+  ++  +
Sbjct: 603 SVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRY 662

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
           C+ GR+ D   +L RM+++   P R+ Y  +I       NL+EA +   ++L+
Sbjct: 663 CQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLR 713



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 251/480 (52%), Gaps = 1/480 (0%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K      A+  L  M ++G+      +  ++ +Y R G L  A +++  M   G
Sbjct: 202 LLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAG 261

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +   N+ I  L K  + ++A   L+ M   G+ PD  TYN+L+   C    + +A 
Sbjct: 262 VEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 321

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
           E+   +  +G  PD VS+ T++G   +  ++++      +M + + L+PD V Y  +I+ 
Sbjct: 322 ELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHM 381

Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
             ++G   +AL    E  +KG  +D V Y+ I++  C+   + EA  L  +M  R   PD
Sbjct: 382 LSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPD 441

Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
             T+T ++ G C+ G +++A  +   M +   KP+ V+Y  L++G C  G+  +A ++  
Sbjct: 442 VVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 501

Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
                  +PN I+YG++++G+   G ++EA  L  EMV KG  PT V  N +I+  C++ 
Sbjct: 502 VSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 561

Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
              +A ++L + +++G   + +++ T+I+GF +  +M+ A +++  M      PD +TY 
Sbjct: 562 KVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYT 621

Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
            +     ++GR+ ++  ++ +M+ KGL+P   T+ ++I+ +     + +     D M++R
Sbjct: 622 ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR 681



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 244/516 (47%), Gaps = 38/516 (7%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           +  L K  K++ A  FL  M+  G+ PD VTYN+LI  YC    +E+A +L+  +  KG 
Sbjct: 273 IYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGC 332

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLL------------- 107
            P   +Y +++  LCK+ + ++ K ++++M+Q   L PD  TYNTL+             
Sbjct: 333 PPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDAL 392

Query: 108 ---------------------VES-CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
                                V S C+K  M EA+ +  +M  R   PD+V+++ ++  F
Sbjct: 393 AFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGF 452

Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
            R G++D A    ++M   G  P+ V YT ++NG C +G  LEA +M +   E     + 
Sbjct: 453 CRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNA 512

Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
           +TY  +++G  R   L+EA DL  EM+E+G FP       LI   C++  + +A    + 
Sbjct: 513 ITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEE 572

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
              K    ++V + T+I GFC++G+ME A  +  DM      P+ ++Y  L +     G 
Sbjct: 573 CLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGR 632

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           + EA  L  +M+ KG+ PT V+  ++I  YC+ G        L +MV     P    YN 
Sbjct: 633 LDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNH 690

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           +I       N+++A  L+ K+       D  T +V++    ++G    +  +  +M  + 
Sbjct: 691 VIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRN 750

Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
           L PD      +    V   NL EA +     ++RG 
Sbjct: 751 LTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGI 786



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 212/420 (50%), Gaps = 1/420 (0%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
             Y +L++ L K   C  A+ VL  M + G+      +  ++V   R   +  A  +   
Sbjct: 197 LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTL 256

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M + GV P++   +T I +  +  +L++AL +   M+  G+ PD V Y  +I GYC    
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVFPDFYTFT 244
           + +AL++   +  KGC  D V+Y T++  LC+ K + +   L  +M++   + PD  T+ 
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376

Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
           TLIH   K G+ + AL        K    D V Y+ ++  FC+ G M++A  L  DM SR
Sbjct: 377 TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436

Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
             +P+ ++Y  +++G+C +G + EA ++  +M   G KP  VS   ++ G C SG + +A
Sbjct: 437 SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 496

Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
            E ++        P++I+Y  +++GF RE  + +A  L  +M  +G  P  +  N+++  
Sbjct: 497 REMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 556

Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
            C+  ++ +++  L   + KG   +   +TT+I+G     +++ A    ++M      PD
Sbjct: 557 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPD 616



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 196/411 (47%), Gaps = 37/411 (9%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           +++ L K    D A  FL E E KG + D V Y+ +++++C++G ++EA  L+  M  + 
Sbjct: 378 LIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRS 437

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
             P V TY ++++G C+ GR D AK++L +M + G  P+T +Y  LL   C      EA 
Sbjct: 438 CNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 497

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+          P+ +++  ++  F R G+L  A    REM   G  P  V   ++I   
Sbjct: 498 EMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSL 557

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC------------------------ 216
           C+N  V+EA K  +E L KGC ++VV + T+++G C                        
Sbjct: 558 CQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDA 617

Query: 217 -----------RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
                      +   L EA +L  +ML +G+ P   TF ++IH +C+ G ++  LNL D 
Sbjct: 618 VTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDR 677

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M ++  KP    YN +I+  C  G +E+A KL   ++      +  +  +L+      G 
Sbjct: 678 MVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGV 735

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
              A+++  +M  + + P L  C  + K     G+  +AD+ + + V  G+
Sbjct: 736 ALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGI 786


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 255/479 (53%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           M++ L K      A+  L  M ++G+      +  ++ +Y R G L  A Q++  M   G
Sbjct: 89  MLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAG 148

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           ++P +   N+ I+ L      ++A   L+ M  +G+ P+  TYN L+   C    + +A 
Sbjct: 149 IEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAM 208

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           E+  EM  +G +PD VS+ T++G   +N ++   +    +M+   L+ D V Y  +I+  
Sbjct: 209 ELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHML 268

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
           C++    EAL+   E  ++G  +D V Y+ I++  C+   + +A ++ NEM  RG  PD 
Sbjct: 269 CKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDV 328

Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
            T+T +I+G  + G + +A  +   M +   KP+ V+Y   + G C+ G   +A ++   
Sbjct: 329 VTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKA 388

Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
              +  +PN I+Y ++++G+   G +++A  +  EM+GKG  PT V  N +++  CR G 
Sbjct: 389 SEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGR 448

Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
             +A +F+ + ++ G   +++++ T+I+ F ++++++ A +L+  M      PD +TY  
Sbjct: 449 VDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTT 508

Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
           I+    ++GR+ ++  +  +M++KG++P   TY T+I+ +     +++     D+ML R
Sbjct: 509 IIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTR 567



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 243/512 (47%), Gaps = 33/512 (6%)

Query: 2   VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
           ++ L   + ++ A  FL  M+  G+ P+ VTYN LI  YC    +E+A +L++ M  KG 
Sbjct: 160 IHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGC 219

Query: 62  KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
            P   +Y +++  LCK  R     +V+++M    L  D  TYNTL+   C+ ++  EA +
Sbjct: 220 SPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQ 279

Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
              E  +RG   D V +S ++  + + G++D+A     EM + G +PD V YT IING+ 
Sbjct: 280 FLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFS 339

Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
           + G V +A KM  +M + GC  + V+Y   L GLC+    +EA ++     E+   P+  
Sbjct: 340 QAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAI 399

Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
           T++ ++HG  ++G ++ A ++   M  K   P  V  N L+   C++G +++A K   + 
Sbjct: 400 TYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEEC 459

Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
           ++   + N +++  +I+ +C    +  A  L  +M      P  V+  TII    + G  
Sbjct: 460 LNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRI 519

Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGF-----------------VREE---------- 394
            +A E   KM+ +G+DP  ++Y T+I+ +                  R+E          
Sbjct: 520 EEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIE 579

Query: 395 ------NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
                 N++ A  L+ K+       D  T +V++  + R+G    +  +  RM  + L P
Sbjct: 580 KLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIP 639

Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
           D      +    + +   +EA       ++RG
Sbjct: 640 DLKLCEKVCKKLMQEGKSEEADNLFLRFVERG 671



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 232/480 (48%), Gaps = 37/480 (7%)

Query: 1   MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
           ++   C  H+++ A   + EM  KG  PD V+Y T++   C+   + E   ++  M    
Sbjct: 194 LIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTK 253

Query: 61  LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
           L     TYN+LI+ LCK    D A + L E  + G   D   Y+ ++   C++  M +A+
Sbjct: 254 LLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAK 313

Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
           EI  EM  RG  PD+V+++ +I  FS+ G++ +A    ++M   G  P+ V YT  + G 
Sbjct: 314 EIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGL 373

Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP-- 238
           C+ G   EA +M     E+    + +TY+ +++G  R   L++A D+  EM+ +G FP  
Sbjct: 374 CQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTP 433

Query: 239 ---------------------------------DFYTFTTLIHGHCKDGNMNKALNLFDI 265
                                            +   FTT+IH  C+  ++  AL+L D 
Sbjct: 434 VEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDD 493

Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
           M   +  PD VTY T+ID   K G +E+A +L   M+ + I P  ++Y  +I+ Y  +G 
Sbjct: 494 MYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGR 553

Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
           V +   L  +M+ +  +    + N +I+  C  G+   AD+ L K++      D+ + + 
Sbjct: 554 VEDLLNLLDKMLTR--QECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHV 611

Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
           L+  ++R+     A+ +  +M ++ L+PD+     +     ++G+  +++ +  R +E+G
Sbjct: 612 LMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERG 671



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 219/419 (52%)

Query: 66  FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
             Y  +++ L K   C  A+ VL  M++ G+      +  ++V   R   +  A ++   
Sbjct: 84  IVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTM 143

Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
           M + G+ P+++  +T I +      L++AL +   M+  G++P+ V Y  +I GYC    
Sbjct: 144 MQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHR 203

Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
           V +A+++  EM  KGC  D V+Y T++  LC+ + + E  D+  +M +  +  D  T+ T
Sbjct: 204 VEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNT 263

Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
           LIH  CK  + ++AL       ++  + D V Y+ ++D +CK G M++A ++  +M +R 
Sbjct: 264 LIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRG 323

Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
             P+ ++Y  +ING+   G V +A ++  +M   G KP  VS    +KG C+ G++S+A 
Sbjct: 324 CIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAR 383

Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
           E +     +   P++I+Y+ +++GF RE  +  A  +V +M  +G  P  +  N++L   
Sbjct: 384 EMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSL 443

Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           CR GR+ +++  +   +  G   +   +TT+I+    Q++++ A    D+M      PD
Sbjct: 444 CRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPD 502



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 139/281 (49%)

Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
           D + Y  +L+ L + K+   A  +   M+ RG+      F  ++  + + G +  A+ + 
Sbjct: 82  DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141

Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
            +M +  I+P+++  NT I        +EKA +    M    I PN ++Y  LI GYC +
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDL 201

Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
             V +A  L  EM  KG  P  VS  T++   C++    +  + + KM    +  D ++Y
Sbjct: 202 HRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTY 261

Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
           NTLI+   + ++ D+A   + + + +G   D + Y+ I+  +C++GRM  ++ I+  M  
Sbjct: 262 NTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFT 321

Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
           +G  PD  TYT +ING      + +A +   +M + G  P+
Sbjct: 322 RGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPN 362


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.138    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,496,672,597
Number of Sequences: 23463169
Number of extensions: 306185047
Number of successful extensions: 1032204
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9711
Number of HSP's successfully gapped in prelim test: 3799
Number of HSP's that attempted gapping in prelim test: 665046
Number of HSP's gapped (non-prelim): 104956
length of query: 487
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 340
effective length of database: 8,910,109,524
effective search space: 3029437238160
effective search space used: 3029437238160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)